BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy4625
PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI
KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHSTVPMSDEEMEMELSLLNKANSNNQNN

High Scoring Gene Products

Symbol, full name Information P value
en
engrailed
protein from Drosophila melanogaster 8.9e-38
inv
invected
protein from Drosophila melanogaster 2.9e-33
eng1b
engrailed 1b
gene_product from Danio rerio 1.1e-32
EN2
Homeobox protein engrailed-2
protein from Gallus gallus 2.9e-32
eng2a
engrailed 2a
gene_product from Danio rerio 4.7e-32
eng2b
engrailed 2b
gene_product from Danio rerio 9.8e-32
LOC529707
Uncharacterized protein
protein from Bos taurus 1.3e-31
EN2
Uncharacterized protein
protein from Canis lupus familiaris 1.3e-31
EN1
Uncharacterized protein
protein from Canis lupus familiaris 1.3e-31
EN2
Homeobox protein engrailed-2
protein from Homo sapiens 1.3e-31
EN1
Homeobox protein engrailed-1
protein from Homo sapiens 1.3e-31
LOC100516112
Uncharacterized protein
protein from Sus scrofa 1.3e-31
LOC100512078
Uncharacterized protein
protein from Sus scrofa 1.3e-31
En1
engrailed 1
protein from Mus musculus 1.3e-31
En2
engrailed 2
protein from Mus musculus 1.3e-31
En2
engrailed homeobox 2
gene from Rattus norvegicus 1.3e-31
En1
engrailed homeobox 1
gene from Rattus norvegicus 1.3e-31
eng1a
engrailed 1a
gene_product from Danio rerio 1.3e-31
EN1
Homeobox protein engrailed-1
protein from Gallus gallus 5.4e-31
F1MXQ1
Uncharacterized protein
protein from Bos taurus 8.4e-26
ceh-16 gene from Caenorhabditis elegans 6.1e-23
ceh-12 gene from Caenorhabditis elegans 1.8e-14
HOXC5
Uncharacterized protein
protein from Bos taurus 1.6e-13
HOXC5
Uncharacterized protein
protein from Canis lupus familiaris 1.6e-13
HOXC5
Homeobox protein Hox-C5
protein from Homo sapiens 1.6e-13
LOC100627840
Uncharacterized protein
protein from Sus scrofa 1.6e-13
Hoxc5
homeobox C5
protein from Mus musculus 1.6e-13
Hoxc5
homeo box C5
gene from Rattus norvegicus 1.6e-13
VAX1
Ventral anterior homeobox 1
protein from Gallus gallus 2.7e-13
VAX1
Ventral anterior homeobox 1
protein from Gallus gallus 2.7e-13
LOC100739572
Uncharacterized protein
protein from Sus scrofa 2.7e-13
meox1
mesenchyme homeobox 1
gene_product from Danio rerio 3.4e-13
zen2
zerknullt-related
protein from Drosophila melanogaster 4.4e-13
LOC100516574
Uncharacterized protein
protein from Sus scrofa 5.6e-13
ro
Homeobox protein rough
protein from Drosophila virilis 6.4e-13
vax1
ventral anterior homeobox 1
gene_product from Danio rerio 6.5e-13
Meox1
mesenchyme homeobox 1
protein from Mus musculus 7.1e-13
Meox1
mesenchyme homeobox 1
gene from Rattus norvegicus 7.1e-13
hoxc5a
homeo box C5a
gene_product from Danio rerio 7.1e-13
VAX1
Ventral anterior homeobox 1
protein from Gallus gallus 7.3e-13
LOC100739572
Uncharacterized protein
protein from Sus scrofa 7.8e-13
VAX1
Uncharacterized protein
protein from Canis lupus familiaris 7.9e-13
VAX1
Ventral anterior homeobox 1
protein from Homo sapiens 7.9e-13
Vax1
ventral anterior homeobox 1
gene from Rattus norvegicus 8.1e-13
Vax1
ventral anterior homeobox containing gene 1
protein from Mus musculus 8.2e-13
MEOX1
Homeobox protein MOX-1
protein from Homo sapiens 9.1e-13
ro
rough
protein from Drosophila melanogaster 9.2e-13
MEOX1
Uncharacterized protein
protein from Bos taurus 1.2e-12
MEOX1
Uncharacterized protein
protein from Canis lupus familiaris 1.2e-12
hoxa5a
homeo box A5a
gene_product from Danio rerio 1.3e-12
HOXB4
Homeobox protein Hox-B4
protein from Gallus gallus 1.5e-12
Hoxd3
homeo box D3
gene from Rattus norvegicus 1.5e-12
Hoxd3
Homeobox protein Hox-D3
protein from Rattus norvegicus 1.5e-12
lin-39 gene from Caenorhabditis elegans 1.5e-12
hoxc4a
homeo box C4a
gene_product from Danio rerio 1.8e-12
GGMOXr1
Mox-1 related protein
protein from Gallus gallus 1.9e-12
HOXB4
Homeobox protein Hox-B4
protein from Bos taurus 1.9e-12
HOXB4
Homeobox protein Hox-B4
protein from Bos taurus 1.9e-12
VAX2
Uncharacterized protein
protein from Canis lupus familiaris 1.9e-12
HOXB4
Uncharacterized protein
protein from Canis lupus familiaris 1.9e-12
HOXB4
Homeobox protein Hox-B4
protein from Homo sapiens 1.9e-12
LOC100522341
Uncharacterized protein
protein from Sus scrofa 1.9e-12
Hoxb4
homeobox B4
protein from Mus musculus 1.9e-12
Hoxb4
homeo box B4
gene from Rattus norvegicus 1.9e-12
gsx1
GS homeobox 1
gene_product from Danio rerio 1.9e-12
hoxb4a
homeo box B4a
gene_product from Danio rerio 1.9e-12
HOXC4
Uncharacterized protein
protein from Bos taurus 2.2e-12
HOXC4
Uncharacterized protein
protein from Canis lupus familiaris 2.2e-12
HOXC4
Homeobox protein Hox-C4
protein from Homo sapiens 2.2e-12
LOC100154759
Uncharacterized protein
protein from Sus scrofa 2.2e-12
Hoxc4
homeobox C4
protein from Mus musculus 2.2e-12
VAX1
Uncharacterized protein
protein from Bos taurus 2.2e-12
ceh-9 gene from Caenorhabditis elegans 2.4e-12
DLX5
Homeobox protein DLX-5
protein from Gallus gallus 2.6e-12
ind
intermediate neuroblasts defective
protein from Drosophila melanogaster 2.7e-12
HOXB4
Uncharacterized protein
protein from Canis lupus familiaris 2.7e-12
DLX5
Distal-less homeobox 5
protein from Bos taurus 2.8e-12
DLX5
Uncharacterized protein
protein from Canis lupus familiaris 2.8e-12
DLX5
Homeobox protein DLX-5
protein from Homo sapiens 2.8e-12
Dlx5
distal-less homeobox 5
protein from Mus musculus 2.8e-12
Dlx5
distal-less homeobox 5
gene from Rattus norvegicus 2.8e-12
HOXD4
Homeobox protein Hox-D4
protein from Gallus gallus 3.1e-12
HOXD4
Homeobox protein Hox-D4
protein from Gallus gallus 3.1e-12
HOXD4
Uncharacterized protein
protein from Canis lupus familiaris 3.1e-12
HOXD4
Homeobox protein Hox-D4
protein from Homo sapiens 3.1e-12
Hoxd4
homeobox D4
protein from Mus musculus 3.1e-12
Hoxd4
homeo box D4
gene from Rattus norvegicus 3.1e-12
hoxd4a
homeo box D4a
gene_product from Danio rerio 3.1e-12
flh
floating head
gene_product from Danio rerio 3.1e-12
LOC100515690
Uncharacterized protein
protein from Sus scrofa 3.1e-12
HOXD4
HOXD4 protein
protein from Bos taurus 3.2e-12
VAX2
Uncharacterized protein
protein from Bos taurus 3.4e-12
VAX2
Ventral anterior homeobox 2
protein from Homo sapiens 3.6e-12
Vax2
ventral anterior homeobox containing gene 2
protein from Mus musculus 3.7e-12

The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy4625
        (120 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0000577 - symbol:en "engrailed" species:7227 "Dros...   405  8.9e-38   1
FB|FBgn0001269 - symbol:inv "invected" species:7227 "Dros...   366  2.9e-33   1
ZFIN|ZDB-GENE-980526-6 - symbol:eng1b "engrailed 1b" spec...   357  1.1e-32   1
UNIPROTKB|Q05917 - symbol:EN2 "Homeobox protein engrailed...   353  2.9e-32   1
ZFIN|ZDB-GENE-980526-167 - symbol:eng2a "engrailed 2a" sp...   351  4.7e-32   1
ZFIN|ZDB-GENE-980526-40 - symbol:eng2b "engrailed 2b" spe...   348  9.8e-32   1
UNIPROTKB|F1N5R9 - symbol:LOC529707 "Uncharacterized prot...   347  1.3e-31   1
UNIPROTKB|F1PG21 - symbol:EN2 "Uncharacterized protein" s...   347  1.3e-31   1
UNIPROTKB|J9NSM7 - symbol:EN1 "Uncharacterized protein" s...   347  1.3e-31   1
UNIPROTKB|P19622 - symbol:EN2 "Homeobox protein engrailed...   347  1.3e-31   1
UNIPROTKB|Q05925 - symbol:EN1 "Homeobox protein engrailed...   347  1.3e-31   1
UNIPROTKB|F1RY10 - symbol:EN1 "Uncharacterized protein" s...   347  1.3e-31   1
UNIPROTKB|F1SHU5 - symbol:EN2 "Uncharacterized protein" s...   347  1.3e-31   1
MGI|MGI:95389 - symbol:En1 "engrailed 1" species:10090 "M...   347  1.3e-31   1
MGI|MGI:95390 - symbol:En2 "engrailed 2" species:10090 "M...   347  1.3e-31   1
RGD|1561842 - symbol:En2 "engrailed homeobox 2" species:1...   347  1.3e-31   1
RGD|1595088 - symbol:En1 "engrailed homeobox 1" species:1...   347  1.3e-31   1
ZFIN|ZDB-GENE-980526-216 - symbol:eng1a "engrailed 1a" sp...   347  1.3e-31   1
UNIPROTKB|Q05916 - symbol:EN1 "Homeobox protein engrailed...   341  5.4e-31   1
UNIPROTKB|F1NF72 - symbol:F1NF72 "Uncharacterized protein...   323  4.4e-29   1
UNIPROTKB|F1MXQ1 - symbol:F1MXQ1 "Uncharacterized protein...   292  8.4e-26   1
WB|WBGene00000439 - symbol:ceh-16 species:6239 "Caenorhab...   265  6.1e-23   1
WB|WBGene00000436 - symbol:ceh-12 species:6239 "Caenorhab...   185  1.8e-14   1
UNIPROTKB|E1BHR6 - symbol:HOXC5 "Uncharacterized protein"...   176  1.6e-13   1
UNIPROTKB|J9P833 - symbol:HOXC5 "Uncharacterized protein"...   176  1.6e-13   1
UNIPROTKB|Q00444 - symbol:HOXC5 "Homeobox protein Hox-C5"...   176  1.6e-13   1
UNIPROTKB|I3LRP3 - symbol:LOC100627840 "Uncharacterized p...   176  1.6e-13   1
MGI|MGI:96196 - symbol:Hoxc5 "homeobox C5" species:10090 ...   176  1.6e-13   1
RGD|1307584 - symbol:Hoxc5 "homeo box C5" species:10116 "...   176  1.6e-13   1
UNIPROTKB|E1BXV0 - symbol:VAX1 "Ventral anterior homeobox...   174  2.7e-13   1
UNIPROTKB|E1C654 - symbol:VAX1 "Ventral anterior homeobox...   174  2.7e-13   1
UNIPROTKB|F1P5G0 - symbol:VAX1 "Ventral anterior homeobox...   174  2.7e-13   1
UNIPROTKB|F1S4R4 - symbol:LOC100739572 "Uncharacterized p...   174  2.7e-13   1
ZFIN|ZDB-GENE-040718-149 - symbol:meox1 "mesenchyme homeo...   173  3.4e-13   1
FB|FBgn0004054 - symbol:zen2 "zerknullt-related" species:...   172  4.4e-13   1
UNIPROTKB|F1S1H4 - symbol:MEOX1 "Uncharacterized protein"...   171  5.6e-13   1
UNIPROTKB|P18264 - symbol:ro "Homeobox protein rough" spe...   175  6.4e-13   1
ZFIN|ZDB-GENE-030904-9 - symbol:vax1 "ventral anterior ho...   174  6.5e-13   1
MGI|MGI:103220 - symbol:Meox1 "mesenchyme homeobox 1" spe...   170  7.1e-13   1
RGD|1308911 - symbol:Meox1 "mesenchyme homeobox 1" specie...   170  7.1e-13   1
ZFIN|ZDB-GENE-980526-533 - symbol:hoxc5a "homeo box C5a" ...   170  7.1e-13   1
UNIPROTKB|Q9PVN2 - symbol:VAX1 "Ventral anterior homeobox...   174  7.3e-13   1
UNIPROTKB|F1S4S0 - symbol:LOC100739572 "Uncharacterized p...   174  7.8e-13   1
UNIPROTKB|E2QUC0 - symbol:VAX1 "Uncharacterized protein" ...   174  7.9e-13   1
UNIPROTKB|Q5SQQ9 - symbol:VAX1 "Ventral anterior homeobox...   174  7.9e-13   1
RGD|621132 - symbol:Vax1 "ventral anterior homeobox 1" sp...   174  8.1e-13   1
UNIPROTKB|Q9JM00 - symbol:Vax1 "Ventral anterior homeobox...   174  8.1e-13   1
MGI|MGI:1277163 - symbol:Vax1 "ventral anterior homeobox ...   174  8.2e-13   1
UNIPROTKB|A8MWF9 - symbol:MEOX1 "Homeobox protein MOX-1" ...   169  9.1e-13   1
UNIPROTKB|P50221 - symbol:MEOX1 "Homeobox protein MOX-1" ...   169  9.1e-13   1
FB|FBgn0003267 - symbol:ro "rough" species:7227 "Drosophi...   174  9.2e-13   1
UNIPROTKB|A2VDR0 - symbol:MEOX1 "Uncharacterized protein"...   168  1.2e-12   1
UNIPROTKB|E2RFP2 - symbol:MEOX1 "Uncharacterized protein"...   168  1.2e-12   1
ZFIN|ZDB-GENE-000823-9 - symbol:hoxa5a "homeo box A5a" sp...   168  1.3e-12   1
UNIPROTKB|H9L184 - symbol:Gga.48067 "Uncharacterized prot...   167  1.5e-12   1
UNIPROTKB|P14840 - symbol:HOXB4 "Homeobox protein Hox-B4"...   167  1.5e-12   1
RGD|1588601 - symbol:Hoxd3 "homeo box D3" species:10116 "...   167  1.5e-12   1
UNIPROTKB|P18867 - symbol:Hoxd3 "Homeobox protein Hox-D3"...   167  1.5e-12   1
WB|WBGene00003024 - symbol:lin-39 species:6239 "Caenorhab...   167  1.5e-12   1
ZFIN|ZDB-GENE-990415-112 - symbol:hoxc4a "homeo box C4a" ...   167  1.8e-12   1
UNIPROTKB|Q9YI38 - symbol:GGMOXr1 "Uncharacterized protei...   166  1.9e-12   1
UNIPROTKB|F1N257 - symbol:HOXB4 "Homeobox protein Hox-B4"...   166  1.9e-12   1
UNIPROTKB|Q08DG5 - symbol:HOXB4 "Homeobox protein Hox-B4"...   166  1.9e-12   1
UNIPROTKB|F1PF43 - symbol:VAX2 "Uncharacterized protein" ...   166  1.9e-12   1
UNIPROTKB|F6UWC1 - symbol:HOXB4 "Uncharacterized protein"...   166  1.9e-12   1
UNIPROTKB|P17483 - symbol:HOXB4 "Homeobox protein Hox-B4"...   166  1.9e-12   1
UNIPROTKB|F1RWG5 - symbol:HOXB4 "Uncharacterized protein"...   166  1.9e-12   1
MGI|MGI:96185 - symbol:Hoxb4 "homeobox B4" species:10090 ...   166  1.9e-12   1
RGD|1560113 - symbol:Hoxb4 "homeo box B4" species:10116 "...   166  1.9e-12   1
ZFIN|ZDB-GENE-041008-135 - symbol:gsx1 "GS homeobox 1" sp...   166  1.9e-12   1
ZFIN|ZDB-GENE-990415-105 - symbol:hoxb4a "homeo box B4a" ...   166  1.9e-12   1
UNIPROTKB|A4FUC1 - symbol:HOXC4 "HOXC4 protein" species:9...   166  2.2e-12   1
UNIPROTKB|E2QSM9 - symbol:HOXC4 "Uncharacterized protein"...   166  2.2e-12   1
UNIPROTKB|P09017 - symbol:HOXC4 "Homeobox protein Hox-C4"...   166  2.2e-12   1
UNIPROTKB|F1SR58 - symbol:HOXC4 "Uncharacterized protein"...   166  2.2e-12   1
MGI|MGI:96195 - symbol:Hoxc4 "homeobox C4" species:10090 ...   166  2.2e-12   1
UNIPROTKB|E1B853 - symbol:VAX1 "Uncharacterized protein" ...   170  2.2e-12   1
UNIPROTKB|F6USR4 - symbol:MEOX2 "Uncharacterized protein"...   165  2.4e-12   1
WB|WBGene00000434 - symbol:ceh-9 species:6239 "Caenorhabd...   165  2.4e-12   1
UNIPROTKB|P50577 - symbol:DLX5 "Homeobox protein DLX-5" s...   167  2.6e-12   1
FB|FBgn0025776 - symbol:ind "intermediate neuroblasts def...   171  2.7e-12   1
UNIPROTKB|E2QT52 - symbol:HOXB4 "Uncharacterized protein"...   166  2.7e-12   1
UNIPROTKB|Q1RMR7 - symbol:DLX5 "Uncharacterized protein" ...   167  2.8e-12   1
UNIPROTKB|E2RJY3 - symbol:DLX5 "Uncharacterized protein" ...   167  2.8e-12   1
UNIPROTKB|P56178 - symbol:DLX5 "Homeobox protein DLX-5" s...   167  2.8e-12   1
MGI|MGI:101926 - symbol:Dlx5 "distal-less homeobox 5" spe...   167  2.8e-12   1
RGD|2506 - symbol:Dlx5 "distal-less homeobox 5" species:1...   167  2.8e-12   1
UNIPROTKB|F1NZJ3 - symbol:HOXD4 "Homeobox protein Hox-D4"...   164  3.1e-12   1
UNIPROTKB|P17278 - symbol:HOXD4 "Homeobox protein Hox-D4"...   164  3.1e-12   1
UNIPROTKB|E2RGY0 - symbol:HOXD4 "Uncharacterized protein"...   164  3.1e-12   1
UNIPROTKB|P09016 - symbol:HOXD4 "Homeobox protein Hox-D4"...   164  3.1e-12   1
MGI|MGI:96208 - symbol:Hoxd4 "homeobox D4" species:10090 ...   164  3.1e-12   1
RGD|1309690 - symbol:Hoxd4 "homeo box D4" species:10116 "...   164  3.1e-12   1
ZFIN|ZDB-GENE-980526-214 - symbol:hoxd4a "homeo box D4a" ...   164  3.1e-12   1
ZFIN|ZDB-GENE-990415-75 - symbol:flh "floating head" spec...   164  3.1e-12   1
UNIPROTKB|F1RZG0 - symbol:HOXD4 "Uncharacterized protein"...   164  3.1e-12   1
UNIPROTKB|A7MBD6 - symbol:HOXD4 "Uncharacterized protein"...   164  3.2e-12   1
UNIPROTKB|E1BBM6 - symbol:VAX2 "Uncharacterized protein" ...   166  3.4e-12   1
UNIPROTKB|Q9UIW0 - symbol:VAX2 "Ventral anterior homeobox...   166  3.6e-12   1
MGI|MGI:1346018 - symbol:Vax2 "ventral anterior homeobox ...   166  3.7e-12   1

WARNING:  Descriptions of 1749 database sequences were not reported due to the
          limiting value of parameter V = 100.


>FB|FBgn0000577 [details] [associations]
            symbol:en "engrailed" species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0000980 "RNA polymerase
            II distal enhancer sequence-specific DNA binding" evidence=IDA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0001078 "RNA polymerase
            II core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in negative regulation of
            transcription" evidence=IDA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IDA] [GO:0035224 "genital disc anterior/posterior
            pattern formation" evidence=IEP;TAS] [GO:0007400 "neuroblast fate
            determination" evidence=IGI] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0007448
            "anterior/posterior pattern specification, imaginal disc"
            evidence=TAS] [GO:0048099 "anterior/posterior lineage restriction,
            imaginal disc" evidence=TAS] [GO:0048100 "wing disc
            anterior/posterior pattern formation" evidence=TAS] [GO:0007386
            "compartment pattern specification" evidence=NAS;TAS] [GO:0007417
            "central nervous system development" evidence=NAS] [GO:0007367
            "segment polarity determination" evidence=NAS;TAS] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0007447 "imaginal disc pattern formation" evidence=TAS]
            [GO:0007485 "imaginal disc-derived male genitalia development"
            evidence=TAS] [GO:0007487 "analia development" evidence=TAS]
            [GO:0007486 "imaginal disc-derived female genitalia development"
            evidence=TAS] [GO:0007388 "posterior compartment specification"
            evidence=TAS] [GO:0035288 "anterior head segmentation"
            evidence=TAS] [GO:0035290 "trunk segmentation" evidence=TAS]
            [GO:0035289 "posterior head segmentation" evidence=TAS] [GO:0035215
            "genital disc development" evidence=IMP] [GO:0035277 "spiracle
            morphogenesis, open tracheal system" evidence=IMP] [GO:0021960
            "anterior commissure morphogenesis" evidence=IMP] [GO:0007418
            "ventral midline development" evidence=IMP] [GO:0007411 "axon
            guidance" evidence=IMP] [GO:0010629 "negative regulation of gene
            expression" evidence=IMP] [GO:0008406 "gonad development"
            evidence=IMP] InterPro:IPR000047 InterPro:IPR000747
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 EMBL:AE013599 GO:GO:0005634
            GO:GO:0007411 GO:GO:0008406 GO:GO:0001078 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0035224
            GO:GO:0007400 GO:GO:0000980 GO:GO:0007486 GO:GO:0035277
            GO:GO:0007367 GO:GO:0021960 GO:GO:0035288 GO:GO:0035289
            GO:GO:0007485 GO:GO:0007487 GO:GO:0048100 GO:GO:0007418
            GO:GO:0035290 GO:GO:0048099 GeneTree:ENSGT00680000099870
            eggNOG:NOG306728 PROSITE:PS00033 InterPro:IPR019549
            InterPro:IPR019737 Pfam:PF10525 KO:K09319 EMBL:M10017 EMBL:K03055
            EMBL:K03056 EMBL:AY069448 EMBL:X01765 PIR:A90862 RefSeq:NP_523700.2
            RefSeq:NP_725059.1 UniGene:Dm.22056 PDB:1DU0 PDB:1ENH PDB:1HDD
            PDB:1P7I PDB:1P7J PDB:1ZTR PDB:2HDD PDB:2HOS PDB:2HOT PDB:2JWT
            PDB:2P81 PDB:3HDD PDBsum:1DU0 PDBsum:1ENH PDBsum:1HDD PDBsum:1P7I
            PDBsum:1P7J PDBsum:1ZTR PDBsum:2HDD PDBsum:2HOS PDBsum:2HOT
            PDBsum:2JWT PDBsum:2P81 PDBsum:3HDD ProteinModelPortal:P02836
            SMR:P02836 IntAct:P02836 MINT:MINT-310169 STRING:P02836
            EnsemblMetazoa:FBtr0088095 EnsemblMetazoa:FBtr0088096 GeneID:36240
            KEGG:dme:Dmel_CG9015 CTD:36240 FlyBase:FBgn0000577
            InParanoid:P02836 OMA:AYPRIHE OrthoDB:EOG4866W0 PhylomeDB:P02836
            EvolutionaryTrace:P02836 GenomeRNAi:36240 NextBio:797500
            Bgee:P02836 GermOnline:CG9015 GO:GO:0007388 Uniprot:P02836
        Length = 552

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 79/97 (81%), Positives = 87/97 (89%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PR RR K  KDK + EKRPRTAFS EQL+RLK EF ENRYLTERRRQ+L++ELGLNEAQI
Sbjct:   439 PRYRRPKQPKDKTNDEKRPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQI 498

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHSTVP 97
             KIWFQNKRAKIKK++G KNPLALQLMAQGLYNH+TVP
Sbjct:   499 KIWFQNKRAKIKKSTGSKNPLALQLMAQGLYNHTTVP 535


>FB|FBgn0001269 [details] [associations]
            symbol:inv "invected" species:7227 "Drosophila melanogaster"
            [GO:0007386 "compartment pattern specification"
            evidence=ISS;IMP;TAS] [GO:0007400 "neuroblast fate determination"
            evidence=IGI] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS;NAS] [GO:0048100 "wing disc anterior/posterior pattern
            formation" evidence=TAS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0007476 "imaginal disc-derived wing
            morphogenesis" evidence=IMP] InterPro:IPR000047 InterPro:IPR000747
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 EMBL:AE013599 GO:GO:0005634
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007400 GO:GO:0000976
            GO:GO:0007476 GO:GO:0048100 GO:GO:0007386
            GeneTree:ENSGT00680000099870 PROSITE:PS00033 eggNOG:NOG238866
            InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
            OrthoDB:EOG4866W0 EMBL:X05273 EMBL:AY089423 EMBL:BT016097
            PIR:A26628 RefSeq:NP_523699.3 RefSeq:NP_725055.2 RefSeq:NP_725056.2
            RefSeq:NP_725057.2 UniGene:Dm.2797 ProteinModelPortal:P05527
            SMR:P05527 IntAct:P05527 MINT:MINT-314454 STRING:P05527
            EnsemblMetazoa:FBtr0088067 EnsemblMetazoa:FBtr0088068
            EnsemblMetazoa:FBtr0088069 EnsemblMetazoa:FBtr0088070 GeneID:36239
            KEGG:dme:Dmel_CG17835 CTD:36239 FlyBase:FBgn0001269
            InParanoid:P05527 OMA:KQQMQLM PhylomeDB:P05527 GenomeRNAi:36239
            NextBio:797489 Bgee:P05527 GermOnline:CG17835 Uniprot:P05527
        Length = 576

 Score = 366 (133.9 bits), Expect = 2.9e-33, P = 2.9e-33
 Identities = 69/83 (83%), Positives = 78/83 (93%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             ++KRPRTAFSG QL+RLK EF ENRYLTE+RRQ+L+ ELGLNEAQIKIWFQNKRAK+KK+
Sbjct:   470 EDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKS 529

Query:    75 SGQKNPLALQLMAQGLYNHSTVP 97
             SG KNPLALQLMAQGLYNHST+P
Sbjct:   530 SGTKNPLALQLMAQGLYNHSTIP 552


>ZFIN|ZDB-GENE-980526-6 [details] [associations]
            symbol:eng1b "engrailed 1b" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0048663 "neuron fate commitment" evidence=IEP]
            InterPro:IPR000747 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-6 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048663
            GeneTree:ENSGT00680000099870 PROSITE:PS00033 eggNOG:NOG238866
            HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
            Pfam:PF10525 HOGENOM:HOG000247054 KO:K09319 OrthoDB:EOG4H72D0
            EMBL:BX908756 EMBL:CU861653 EMBL:BC091669 IPI:IPI00555352
            RefSeq:NP_001013516.1 UniGene:Dr.79493 SMR:Q5BJ08
            Ensembl:ENSDART00000016642 GeneID:541371 KEGG:dre:541371 CTD:541371
            InParanoid:Q5BJ08 OMA:LPHQAAQ NextBio:20879183 Uniprot:Q5BJ08
        Length = 274

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 70/95 (73%), Positives = 81/95 (85%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PR+R++K  K ++ ++KRPRTAF+ EQL RLK EF  NRY+TE+RRQ LA EL LNE+QI
Sbjct:   170 PRTRKLKKKKSEK-EDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQSLAQELNLNESQI 228

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             KIWFQNKRAKIKKASG KN LALQLMAQGLYNHST
Sbjct:   229 KIWFQNKRAKIKKASGYKNGLALQLMAQGLYNHST 263


>UNIPROTKB|Q05917 [details] [associations]
            symbol:EN2 "Homeobox protein engrailed-2" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007411 "axon
            guidance" evidence=IDA] [GO:0030426 "growth cone" evidence=IDA]
            [GO:0030175 "filopodium" evidence=IDA] [GO:0030027 "lamellipodium"
            evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
            [GO:0045727 "positive regulation of translation" evidence=IDA]
            [GO:0042327 "positive regulation of phosphorylation" evidence=IDA]
            InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
            PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0007411 GO:GO:0003700 GO:GO:0030027
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0030175 GO:GO:0030426 GO:GO:0045727 GO:GO:0000976
            GO:GO:0042327 PROSITE:PS00033 HOVERGEN:HBG005975 InterPro:IPR019549
            InterPro:IPR019737 Pfam:PF10525 KO:K09319 EMBL:L12696 EMBL:L12697
            IPI:IPI00579837 PIR:F48423 RefSeq:NP_001254648.1 UniGene:Gga.56328
            GeneID:100859435 KEGG:gga:100859435 CTD:2020 Uniprot:Q05917
        Length = 289

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 70/95 (73%), Positives = 79/95 (83%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PRSR+ K  K+   ++KRPRTAF+ EQL RLK EF  NRYLTE+RRQ LA ELGLNE+QI
Sbjct:   186 PRSRKPKK-KNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQI 244

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             KIWFQNKRAKIKKA+G KN LA+ LMAQGLYNHST
Sbjct:   245 KIWFQNKRAKIKKATGSKNSLAVHLMAQGLYNHST 279


>ZFIN|ZDB-GENE-980526-167 [details] [associations]
            symbol:eng2a "engrailed 2a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0030901 "midbrain development" evidence=IGI] [GO:0009952
            "anterior/posterior pattern specification" evidence=IGI]
            [GO:0001708 "cell fate specification" evidence=IGI]
            InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
            PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-980526-167 GO:GO:0005634 GO:GO:0001708 GO:GO:0009952
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0030901 GO:GO:0000976
            GeneTree:ENSGT00680000099870 eggNOG:NOG306728 PROSITE:PS00033
            HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
            Pfam:PF10525 HOGENOM:HOG000247054 OrthoDB:EOG4H72D0 EMBL:X68151
            EMBL:X68446 EMBL:X07622 EMBL:X59126 IPI:IPI00509115 PIR:A56557
            PIR:S00562 RefSeq:NP_571119.2 UniGene:Dr.162132 UniGene:Dr.162307
            UniGene:Dr.75073 ProteinModelPortal:P09015 SMR:P09015 STRING:P09015
            Ensembl:ENSDART00000031700 GeneID:30243 KEGG:dre:30243 CTD:30243
            InParanoid:P09015 OMA:ERHEECE NextBio:20806696 ArrayExpress:P09015
            Bgee:P09015 Uniprot:P09015
        Length = 265

 Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
 Identities = 74/96 (77%), Positives = 79/96 (82%)

Query:     1 PRSRRIKSGKDKRSKE-KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQ 59
             PRSR+ K  K   SKE KRPRTAF+ EQL RLK EF  NRYLTE+RRQ LA ELGLNE+Q
Sbjct:   162 PRSRKPK--KKAASKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQ 219

Query:    60 IKIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             IKIWFQNKRAKIKKASG KN LA+ LMAQGLYNHST
Sbjct:   220 IKIWFQNKRAKIKKASGVKNGLAIHLMAQGLYNHST 255


>ZFIN|ZDB-GENE-980526-40 [details] [associations]
            symbol:eng2b "engrailed 2b" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IGI] [GO:0030901 "midbrain development"
            evidence=IGI] [GO:0001708 "cell fate specification" evidence=IGI]
            InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
            PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-980526-40 GO:GO:0005634 GO:GO:0001708 GO:GO:0009952
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0030901 GO:GO:0000976 PROSITE:PS00033
            HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
            Pfam:PF10525 HSSP:P14653 EMBL:BC071290 IPI:IPI00512460
            UniGene:Dr.498 ProteinModelPortal:Q6IQW3 SMR:Q6IQW3 STRING:Q6IQW3
            InParanoid:Q6IQW3 ArrayExpress:Q6IQW3 Uniprot:Q6IQW3
        Length = 261

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 70/96 (72%), Positives = 79/96 (82%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PRSR+ K  K    ++KRPRTAF+ EQL RLK EF  NRYLTE+RRQ LA ELGLNE+QI
Sbjct:   158 PRSRKPKK-KTPTKEDKRPRTAFTAEQLQRLKNEFQNNRYLTEQRRQALAQELGLNESQI 216

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHSTV 96
             KIWFQNKRAKIKKA+G KN LA+ LMAQGLYNH+TV
Sbjct:   217 KIWFQNKRAKIKKATGNKNALAVHLMAQGLYNHATV 252


>UNIPROTKB|F1N5R9 [details] [associations]
            symbol:LOC529707 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048666
            "neuron development" evidence=IEA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043473 "pigmentation" evidence=IEA] [GO:0035115 "embryonic
            forelimb morphogenesis" evidence=IEA] [GO:0030917
            "midbrain-hindbrain boundary development" evidence=IEA] [GO:0030902
            "hindbrain development" evidence=IEA] [GO:0030901 "midbrain
            development" evidence=IEA] [GO:0009954 "proximal/distal pattern
            formation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
            formation" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR000747
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 GO:GO:0030902
            GO:GO:0009953 GO:GO:0035115 GO:GO:0009954 GO:GO:0043473
            GO:GO:0030917 GeneTree:ENSGT00680000099870 PROSITE:PS00033
            InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525 KO:K09319
            OMA:NCGPPDG EMBL:DAAA02005178 IPI:IPI00716436 RefSeq:XP_003585804.1
            Ensembl:ENSBTAT00000038355 GeneID:529707 KEGG:bta:529707
            Uniprot:F1N5R9
        Length = 400

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 68/95 (71%), Positives = 81/95 (85%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PR+R++K  K+++ ++KRPRTAF+ EQL RLK EF  NRY+TE+RRQ LA EL LNE+QI
Sbjct:   297 PRTRKLKKKKNEK-EDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNESQI 355

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             KIWFQNKRAKIKKA+G KN LAL LMAQGLYNHST
Sbjct:   356 KIWFQNKRAKIKKATGIKNGLALHLMAQGLYNHST 390


>UNIPROTKB|F1PG21 [details] [associations]
            symbol:EN2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR000747 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099870 PROSITE:PS00033 InterPro:IPR019549
            InterPro:IPR019737 Pfam:PF10525 EMBL:AAEX03010308 EMBL:AAEX03010309
            EMBL:AAEX03010310 Ensembl:ENSCAFT00000008172 OMA:GAKKGSD
            Uniprot:F1PG21
        Length = 327

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 69/95 (72%), Positives = 78/95 (82%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PRSR+ K  K+   ++KRPRTAF+ EQL RLK EF  NRYLTE+RRQ LA EL LNE+QI
Sbjct:   224 PRSRKPKK-KNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQI 282

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             KIWFQNKRAKIKKA+G KN LA+ LMAQGLYNHST
Sbjct:   283 KIWFQNKRAKIKKATGNKNTLAVHLMAQGLYNHST 317


>UNIPROTKB|J9NSM7 [details] [associations]
            symbol:EN1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR000747 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099870 PROSITE:PS00033 InterPro:IPR019549
            InterPro:IPR019737 Pfam:PF10525 EMBL:AAEX03011883
            Ensembl:ENSCAFT00000048402 OMA:IGPAHRE Uniprot:J9NSM7
        Length = 194

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 68/95 (71%), Positives = 81/95 (85%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PR+R++K  K+++ ++KRPRTAF+ EQL RLK EF  NRY+TE+RRQ LA EL LNE+QI
Sbjct:    91 PRTRKLKKKKNEK-EDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNESQI 149

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             KIWFQNKRAKIKKA+G KN LAL LMAQGLYNHST
Sbjct:   150 KIWFQNKRAKIKKATGIKNGLALHLMAQGLYNHST 184


>UNIPROTKB|P19622 [details] [associations]
            symbol:EN2 "Homeobox protein engrailed-2" species:9606
            "Homo sapiens" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] [GO:0030901 "midbrain development"
            evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=TAS]
            InterPro:IPR000747 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048666
            GO:GO:0030901 GO:GO:0030902 Orphanet:106 EMBL:CH236954
            eggNOG:NOG306728 PROSITE:PS00033 HOVERGEN:HBG005975
            InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
            HOGENOM:HOG000247054 KO:K09319 OrthoDB:EOG4H72D0 CTD:2020
            EMBL:L12701 EMBL:L12700 EMBL:AC008060 EMBL:BC104970 EMBL:BC104972
            EMBL:J03066 IPI:IPI00020031 PIR:E48423 RefSeq:NP_001418.2
            UniGene:Hs.134989 ProteinModelPortal:P19622 SMR:P19622
            STRING:P19622 PhosphoSite:P19622 DMDM:21903415 PRIDE:P19622
            Ensembl:ENST00000297375 GeneID:2020 KEGG:hsa:2020 UCSC:uc003wmb.3
            GeneCards:GC07P155250 HGNC:HGNC:3343 HPA:CAB025088 MIM:131310
            neXtProt:NX_P19622 PharmGKB:PA27780 InParanoid:P19622 OMA:HRVTNFF
            PhylomeDB:P19622 GenomeRNAi:2020 NextBio:8185 Bgee:P19622
            CleanEx:HS_EN2 Genevestigator:P19622 GermOnline:ENSG00000164778
            Uniprot:P19622
        Length = 333

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 69/95 (72%), Positives = 78/95 (82%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PRSR+ K  K+   ++KRPRTAF+ EQL RLK EF  NRYLTE+RRQ LA EL LNE+QI
Sbjct:   230 PRSRKPKK-KNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQI 288

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             KIWFQNKRAKIKKA+G KN LA+ LMAQGLYNHST
Sbjct:   289 KIWFQNKRAKIKKATGNKNTLAVHLMAQGLYNHST 323


>UNIPROTKB|Q05925 [details] [associations]
            symbol:EN1 "Homeobox protein engrailed-1" species:9606
            "Homo sapiens" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009953
            "dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
            "proximal/distal pattern formation" evidence=IEA] [GO:0030901
            "midbrain development" evidence=IEA] [GO:0030902 "hindbrain
            development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
            development" evidence=IEA] [GO:0035115 "embryonic forelimb
            morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0001501 "skeletal system development" evidence=TAS] [GO:0009653
            "anatomical structure morphogenesis" evidence=TAS]
            InterPro:IPR000747 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH471103 GO:GO:0001501
            GO:GO:0048666 GO:GO:0030901 GO:GO:0030902 GO:GO:0009953
            GO:GO:0035115 GO:GO:0009954 GO:GO:0009653 GO:GO:0043473
            GO:GO:0030917 PROSITE:PS00033 eggNOG:NOG238866 HOVERGEN:HBG005975
            InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525 EMBL:L12699
            EMBL:L12698 EMBL:AC012665 IPI:IPI00016734 PIR:B48423
            RefSeq:NP_001417.3 UniGene:Hs.271977 ProteinModelPortal:Q05925
            SMR:Q05925 STRING:Q05925 PhosphoSite:Q05925 DMDM:215274149
            PRIDE:Q05925 DNASU:2019 Ensembl:ENST00000295206 GeneID:2019
            KEGG:hsa:2019 UCSC:uc002tlm.3 CTD:2019 GeneCards:GC02M119694
            HGNC:HGNC:3342 HPA:CAB014884 MIM:131290 neXtProt:NX_Q05925
            PharmGKB:PA27779 HOGENOM:HOG000247054 InParanoid:Q05925 KO:K09319
            OMA:NCGPPDG OrthoDB:EOG4H72D0 PhylomeDB:Q05925 GenomeRNAi:2019
            NextBio:8181 Bgee:Q05925 CleanEx:HS_EN1 Genevestigator:Q05925
            GermOnline:ENSG00000163064 Uniprot:Q05925
        Length = 392

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 68/95 (71%), Positives = 81/95 (85%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PR+R++K  K+++ ++KRPRTAF+ EQL RLK EF  NRY+TE+RRQ LA EL LNE+QI
Sbjct:   289 PRTRKLKKKKNEK-EDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNESQI 347

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             KIWFQNKRAKIKKA+G KN LAL LMAQGLYNHST
Sbjct:   348 KIWFQNKRAKIKKATGIKNGLALHLMAQGLYNHST 382


>UNIPROTKB|F1RY10 [details] [associations]
            symbol:EN1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048666 "neuron
            development" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043473 "pigmentation" evidence=IEA] [GO:0035115 "embryonic
            forelimb morphogenesis" evidence=IEA] [GO:0030917
            "midbrain-hindbrain boundary development" evidence=IEA] [GO:0030902
            "hindbrain development" evidence=IEA] [GO:0030901 "midbrain
            development" evidence=IEA] [GO:0009954 "proximal/distal pattern
            formation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
            formation" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR000747
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 GO:GO:0030902
            GO:GO:0009953 GO:GO:0035115 GO:GO:0009954 GO:GO:0043473
            GO:GO:0030917 GeneTree:ENSGT00680000099870 PROSITE:PS00033
            InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525 KO:K09319
            OMA:NCGPPDG EMBL:CU466366 RefSeq:XP_003133330.1
            Ensembl:ENSSSCT00000017115 GeneID:100516112 KEGG:ssc:100516112
            Uniprot:F1RY10
        Length = 400

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 68/95 (71%), Positives = 81/95 (85%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PR+R++K  K+++ ++KRPRTAF+ EQL RLK EF  NRY+TE+RRQ LA EL LNE+QI
Sbjct:   297 PRTRKLKKKKNEK-EDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNESQI 355

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             KIWFQNKRAKIKKA+G KN LAL LMAQGLYNHST
Sbjct:   356 KIWFQNKRAKIKKATGIKNGLALHLMAQGLYNHST 390


>UNIPROTKB|F1SHU5 [details] [associations]
            symbol:EN2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048666 "neuron
            development" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030901
            "midbrain development" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR000747 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901
            GO:GO:0030902 GeneTree:ENSGT00680000099870 PROSITE:PS00033
            InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525 KO:K09319
            OMA:HRVTNFF EMBL:CU856209 RefSeq:XP_003134575.1
            Ensembl:ENSSSCT00000017879 GeneID:100512078 KEGG:ssc:100512078
            ArrayExpress:F1SHU5 Uniprot:F1SHU5
        Length = 342

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 69/95 (72%), Positives = 78/95 (82%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PRSR+ K  K+   ++KRPRTAF+ EQL RLK EF  NRYLTE+RRQ LA EL LNE+QI
Sbjct:   239 PRSRKPKK-KNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQI 297

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             KIWFQNKRAKIKKA+G KN LA+ LMAQGLYNHST
Sbjct:   298 KIWFQNKRAKIKKATGNKNTLAVHLMAQGLYNHST 332


>MGI|MGI:95389 [details] [associations]
            symbol:En1 "engrailed 1" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IMP]
            [GO:0009954 "proximal/distal pattern formation" evidence=IMP]
            [GO:0016020 "membrane" evidence=ISO] [GO:0030182 "neuron
            differentiation" evidence=IGI] [GO:0030326 "embryonic limb
            morphogenesis" evidence=IGI;IMP] [GO:0030901 "midbrain development"
            evidence=IGI] [GO:0030902 "hindbrain development" evidence=IGI]
            [GO:0030917 "midbrain-hindbrain boundary development" evidence=IMP]
            [GO:0035115 "embryonic forelimb morphogenesis" evidence=IGI]
            [GO:0043473 "pigmentation" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0048666 "neuron development" evidence=IGI]
            InterPro:IPR000747 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:95389 GO:GO:0005634
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048666
            GO:GO:0030901 GO:GO:0030902 GO:GO:0009953 GO:GO:0035115
            GO:GO:0009954 GO:GO:0043473 GO:GO:0030917
            GeneTree:ENSGT00680000099870 PROSITE:PS00033 eggNOG:NOG238866
            HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
            Pfam:PF10525 CTD:2019 HOGENOM:HOG000247054 KO:K09319 OMA:NCGPPDG
            OrthoDB:EOG4H72D0 EMBL:L12703 EMBL:AK140408 EMBL:Y00201
            IPI:IPI00132510 PIR:A48423 RefSeq:NP_034263.2 UniGene:Mm.2657
            ProteinModelPortal:P09065 SMR:P09065 STRING:P09065
            PhosphoSite:P09065 PRIDE:P09065 Ensembl:ENSMUST00000079721
            GeneID:13798 KEGG:mmu:13798 InParanoid:Q3USF7 NextBio:284550
            Bgee:P09065 CleanEx:MM_EN1 Genevestigator:P09065
            GermOnline:ENSMUSG00000058665 Uniprot:P09065
        Length = 401

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 68/95 (71%), Positives = 81/95 (85%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PR+R++K  K+++ ++KRPRTAF+ EQL RLK EF  NRY+TE+RRQ LA EL LNE+QI
Sbjct:   298 PRTRKLKKKKNEK-EDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNESQI 356

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             KIWFQNKRAKIKKA+G KN LAL LMAQGLYNHST
Sbjct:   357 KIWFQNKRAKIKKATGIKNGLALHLMAQGLYNHST 391


>MGI|MGI:95390 [details] [associations]
            symbol:En2 "engrailed 2" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0016020 "membrane" evidence=ISO] [GO:0030182 "neuron
            differentiation" evidence=IGI] [GO:0030901 "midbrain development"
            evidence=IGI] [GO:0030902 "hindbrain development" evidence=IGI]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0048666 "neuron
            development" evidence=IGI] InterPro:IPR000747 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:95390
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0048666 GO:GO:0030901 GO:GO:0030902 eggNOG:NOG306728
            PROSITE:PS00033 HOVERGEN:HBG005975 InterPro:IPR019549
            InterPro:IPR019737 Pfam:PF10525 HOGENOM:HOG000247054 KO:K09319
            OrthoDB:EOG4H72D0 CTD:2020 OMA:HRVTNFF EMBL:L12704 EMBL:L12705
            EMBL:Y00203 IPI:IPI00132513 PIR:D48423 RefSeq:NP_034264.1
            UniGene:Mm.4298 ProteinModelPortal:P09066 SMR:P09066 STRING:P09066
            PhosphoSite:P09066 PaxDb:P09066 PRIDE:P09066 DNASU:13799
            Ensembl:ENSMUST00000036177 GeneID:13799 KEGG:mmu:13799
            InParanoid:P09066 NextBio:284554 Bgee:P09066 CleanEx:MM_EN2
            Genevestigator:P09066 GermOnline:ENSMUSG00000039095 Uniprot:P09066
        Length = 324

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 69/95 (72%), Positives = 78/95 (82%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PRSR+ K  K+   ++KRPRTAF+ EQL RLK EF  NRYLTE+RRQ LA EL LNE+QI
Sbjct:   221 PRSRKPKK-KNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQI 279

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             KIWFQNKRAKIKKA+G KN LA+ LMAQGLYNHST
Sbjct:   280 KIWFQNKRAKIKKATGNKNTLAVHLMAQGLYNHST 314


>RGD|1561842 [details] [associations]
            symbol:En2 "engrailed homeobox 2" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0030182
            "neuron differentiation" evidence=ISO] [GO:0030901 "midbrain
            development" evidence=IEA;ISO] [GO:0030902 "hindbrain development"
            evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048666
            "neuron development" evidence=IEA;ISO] InterPro:IPR000747
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:1561842 GO:GO:0005634 GO:GO:0016020 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901
            GO:GO:0030902 GeneTree:ENSGT00680000099870 PROSITE:PS00033
            InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525 KO:K09319
            OrthoDB:EOG4H72D0 CTD:2020 OMA:HRVTNFF EMBL:CH474057
            IPI:IPI00192500 RefSeq:NP_001102684.1 UniGene:Rn.156472
            Ensembl:ENSRNOT00000008951 GeneID:499964 KEGG:rno:499964
            NextBio:704582 Uniprot:D3Z8B1
        Length = 323

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 69/95 (72%), Positives = 78/95 (82%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PRSR+ K  K+   ++KRPRTAF+ EQL RLK EF  NRYLTE+RRQ LA EL LNE+QI
Sbjct:   220 PRSRKPKK-KNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQI 278

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             KIWFQNKRAKIKKA+G KN LA+ LMAQGLYNHST
Sbjct:   279 KIWFQNKRAKIKKATGNKNTLAVHLMAQGLYNHST 313


>RGD|1595088 [details] [associations]
            symbol:En1 "engrailed homeobox 1" species:10116 "Rattus
            norvegicus" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0009953 "dorsal/ventral
            pattern formation" evidence=ISO] [GO:0009954 "proximal/distal
            pattern formation" evidence=ISO] [GO:0016020 "membrane"
            evidence=IDA] [GO:0030182 "neuron differentiation" evidence=ISO]
            [GO:0030326 "embryonic limb morphogenesis" evidence=ISO]
            [GO:0030901 "midbrain development" evidence=ISO] [GO:0030902
            "hindbrain development" evidence=ISO] [GO:0030917
            "midbrain-hindbrain boundary development" evidence=ISO] [GO:0035115
            "embryonic forelimb morphogenesis" evidence=ISO] [GO:0042220
            "response to cocaine" evidence=IEP] [GO:0043473 "pigmentation"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0048666 "neuron
            development" evidence=ISO] REFSEQ:XM_003752632 Ncbi:XP_003752680
        Length = 353

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 68/95 (71%), Positives = 81/95 (85%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PR+R++K  K+++ ++KRPRTAF+ EQL RLK EF  NRY+TE+RRQ LA EL LNE+QI
Sbjct:   250 PRTRKLKKKKNEK-EDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNESQI 308

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             KIWFQNKRAKIKKA+G KN LAL LMAQGLYNHST
Sbjct:   309 KIWFQNKRAKIKKATGIKNGLALHLMAQGLYNHST 343


>ZFIN|ZDB-GENE-980526-216 [details] [associations]
            symbol:eng1a "engrailed 1a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
            PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-980526-216 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00680000099870 PROSITE:PS00033
            HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
            Pfam:PF10525 EMBL:CABZ01070420 EMBL:BC080209 IPI:IPI00500053
            UniGene:Dr.75072 SMR:Q68EL7 STRING:Q68EL7
            Ensembl:ENSDART00000012506 InParanoid:Q68EL7 Uniprot:Q68EL7
        Length = 231

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 68/96 (70%), Positives = 80/96 (83%)

Query:     1 PRSRRIKS-GKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQ 59
             PR+R++K    +  S +KRPRTAF+ EQL RLK EF  +RY+TE+RRQ LA ELGLNE+Q
Sbjct:   127 PRTRKLKKKNNNTESDDKRPRTAFTAEQLQRLKAEFQTSRYITEQRRQALARELGLNESQ 186

Query:    60 IKIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             IKIWFQNKRAKIKK+SG KN LA+QLMAQGLYNHST
Sbjct:   187 IKIWFQNKRAKIKKSSGFKNALAMQLMAQGLYNHST 222


>UNIPROTKB|Q05916 [details] [associations]
            symbol:EN1 "Homeobox protein engrailed-1" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000747 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 PROSITE:PS00033
            EMBL:L12694 EMBL:L12695 IPI:IPI00582480 PIR:C48423
            ProteinModelPortal:Q05916 SMR:Q05916 STRING:Q05916 PRIDE:Q05916
            eggNOG:NOG238866 HOVERGEN:HBG005975 InterPro:IPR019549
            InterPro:IPR019737 Pfam:PF10525 Uniprot:Q05916
        Length = 333

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 66/95 (69%), Positives = 80/95 (84%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PR+R++K  K ++ ++KRPRTAF+ EQL RLK EF  NRY+TE+RRQ LA EL LNE+++
Sbjct:   230 PRTRKLKKKKTEK-EDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQSLAQELSLNESRV 288

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQGLYNHST 95
             KIWFQNKRAKIKKA+G KN LAL LMAQGLYNHST
Sbjct:   289 KIWFQNKRAKIKKATGIKNGLALHLMAQGLYNHST 323


>UNIPROTKB|F1NF72 [details] [associations]
            symbol:F1NF72 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009953
            "dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
            "proximal/distal pattern formation" evidence=IEA] [GO:0030901
            "midbrain development" evidence=IEA] [GO:0030902 "hindbrain
            development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
            development" evidence=IEA] [GO:0035115 "embryonic forelimb
            morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
            development" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00680000099870
            PROSITE:PS00033 InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
            EMBL:AADN02016916 IPI:IPI00812139 Ensembl:ENSGALT00000019794
            OMA:ASNDEKR Uniprot:F1NF72
        Length = 100

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 63/81 (77%), Positives = 70/81 (86%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             ++KRPRTAF+ EQL RLK EF  NRY+TE+RRQ LA EL LNE+QIKIWFQNKRAKIKKA
Sbjct:     2 EDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAKIKKA 61

Query:    75 SGQKNPLALQLMAQGLYNHST 95
             +G KN LAL LMAQGLYNHST
Sbjct:    62 TGIKNGLALHLMAQGLYNHST 82


>UNIPROTKB|F1MXQ1 [details] [associations]
            symbol:F1MXQ1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048666 "neuron
            development" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0030902 "hindbrain development" evidence=IEA] [GO:0030901
            "midbrain development" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 GO:GO:0030902
            GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:DAAA02012122
            EMBL:DAAA02012123 IPI:IPI00718569 Ensembl:ENSBTAT00000028648
            OMA:PSTHMEA Uniprot:F1MXQ1
        Length = 186

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 59/89 (66%), Positives = 69/89 (77%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             PRSR+ K  K+   ++KRPRTAF+ EQL RLK EF  NRYLTE+RRQ LA EL LNE+QI
Sbjct:    83 PRSRKPKK-KNPNKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQI 141

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQG 89
             KIWFQNKRAKIKKA+G KN  +  + AQG
Sbjct:   142 KIWFQNKRAKIKKATGSKNTPSTHMEAQG 170


>WB|WBGene00000439 [details] [associations]
            symbol:ceh-16 species:6239 "Caenorhabditis elegans"
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;IDA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0040015 "negative regulation of multicellular organism growth"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0009957 "epidermal cell fate specification" evidence=IMP]
            [GO:0010172 "embryonic body morphogenesis" evidence=IMP]
            [GO:0045026 "plasma membrane fusion" evidence=IGI;IMP] [GO:0048859
            "formation of anatomical boundary" evidence=IMP] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
            GO:GO:0043565 GO:GO:0045944 GO:GO:0040011 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0040015 GO:GO:0000976 GO:GO:0010172
            GO:GO:0009957 GO:GO:0048859 GeneTree:ENSGT00680000099870
            EMBL:AY647457 EMBL:FO080380 PIR:S44752 PIR:T15488
            RefSeq:NP_498898.2 UniGene:Cel.25260 ProteinModelPortal:P34326
            SMR:P34326 STRING:P34326 EnsemblMetazoa:C13G5.1.1
            EnsemblMetazoa:C13G5.1.2 GeneID:191618 KEGG:cel:CELE_C13G5.1
            UCSC:C13G5.1 CTD:191618 WormBase:C13G5.1 eggNOG:NOG306728
            HOGENOM:HOG000022417 InParanoid:P34326 OMA:PTFASPN NextBio:949698
            GO:GO:0045026 PROSITE:PS00033 Uniprot:P34326
        Length = 187

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 52/95 (54%), Positives = 66/95 (69%)

Query:     2 RSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIK 61
             R R          +EKRPRTAF+G+QL RLK EF E+RYLTE+RRQELA+ELGLNE+QIK
Sbjct:    73 RKRESTGSSGSSEEEKRPRTAFTGDQLDRLKTEFRESRYLTEKRRQELAHELGLNESQIK 132

Query:    62 IWFQNKRAKIKKASGQKNPLALQLMAQGLYNHSTV 96
             IWFQNKRAK+KK++          +    +NH ++
Sbjct:   133 IWFQNKRAKLKKSTSSVPRDRCSSVTPNPHNHPSI 167


>WB|WBGene00000436 [details] [associations]
            symbol:ceh-12 species:6239 "Caenorhabditis elegans"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00660000095141 EMBL:FO080753 EMBL:X17076 PIR:S09504
            PIR:T32764 RefSeq:NP_491693.1 UniGene:Cel.19039
            ProteinModelPortal:P17487 SMR:P17487 EnsemblMetazoa:F33D11.4
            GeneID:172255 KEGG:cel:CELE_F33D11.4 UCSC:F33D11.4 CTD:172255
            WormBase:F33D11.4 eggNOG:NOG284589 HOGENOM:HOG000017276
            InParanoid:P17487 NextBio:874695 Uniprot:P17487
        Length = 180

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 35/59 (59%), Positives = 47/59 (79%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             K +RPRTAFS EQL +L+ +F++NRYL+  RR +LA +L L+E QIKIWFQN+R K K+
Sbjct:   109 KMRRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNKR 167


>UNIPROTKB|E1BHR6 [details] [associations]
            symbol:HOXC5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
            skeletal system development" evidence=IEA] [GO:0030054 "cell
            junction" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222
            OMA:CYSGLDL EMBL:DAAA02012839 IPI:IPI00694608 RefSeq:NP_001178280.1
            UniGene:Bt.93629 Ensembl:ENSBTAT00000012696 GeneID:100140629
            KEGG:bta:100140629 NextBio:20790992 Uniprot:E1BHR6
        Length = 222

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 39/67 (58%), Positives = 46/67 (68%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RT+++  Q   L+ EF  NRYLT RRR E+AN L LNE QIKIWFQN+R K KK S 
Sbjct:   156 KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215

Query:    77 QKNPLAL 83
              K+  AL
Sbjct:   216 MKSKEAL 222


>UNIPROTKB|J9P833 [details] [associations]
            symbol:HOXC5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104161
            OMA:CYSGLDL EMBL:AAEX03014973 ProteinModelPortal:J9P833
            Ensembl:ENSCAFT00000049441 Uniprot:J9P833
        Length = 222

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 39/67 (58%), Positives = 46/67 (68%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RT+++  Q   L+ EF  NRYLT RRR E+AN L LNE QIKIWFQN+R K KK S 
Sbjct:   156 KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215

Query:    77 QKNPLAL 83
              K+  AL
Sbjct:   216 MKSKEAL 222


>UNIPROTKB|Q00444 [details] [associations]
            symbol:HOXC5 "Homeobox protein Hox-C5" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0048706 "embryonic skeletal system
            development" evidence=IEA] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=TAS] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0030054 "cell junction" evidence=IDA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006357 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048706 HOVERGEN:HBG016849
            HOGENOM:HOG000231178 KO:K09305 UniGene:Hs.549040 EMBL:X61755
            IPI:IPI00022893 PIR:S20029 RefSeq:NP_061826.1
            ProteinModelPortal:Q00444 SMR:Q00444 STRING:Q00444
            PhosphoSite:Q00444 DMDM:232262 PRIDE:Q00444 DNASU:3222
            Ensembl:ENST00000312492 GeneID:3222 KEGG:hsa:3222 UCSC:uc001sew.3
            CTD:3222 GeneCards:GC12P054379 HGNC:HGNC:5127 HPA:HPA026794
            MIM:142973 neXtProt:NX_Q00444 PharmGKB:PA29402 eggNOG:NOG286013
            InParanoid:Q00444 OMA:CYSGLDL OrthoDB:EOG4CRM16 PhylomeDB:Q00444
            GenomeRNAi:3222 NextBio:12820 Bgee:Q00444 Genevestigator:Q00444
            GermOnline:ENSG00000172789 Uniprot:Q00444
        Length = 222

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 39/67 (58%), Positives = 46/67 (68%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RT+++  Q   L+ EF  NRYLT RRR E+AN L LNE QIKIWFQN+R K KK S 
Sbjct:   156 KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215

Query:    77 QKNPLAL 83
              K+  AL
Sbjct:   216 MKSKEAL 222


>UNIPROTKB|I3LRP3 [details] [associations]
            symbol:LOC100627840 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706
            "embryonic skeletal system development" evidence=IEA] [GO:0030054
            "cell junction" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104161 KO:K09305 OMA:CYSGLDL EMBL:CU633419
            EMBL:FP579005 RefSeq:XP_003126250.1 RefSeq:XP_003355471.1
            SMR:I3LRP3 Ensembl:ENSSSCT00000028782 Ensembl:ENSSSCT00000031368
            GeneID:100152707 GeneID:100627840 KEGG:ssc:100152707
            KEGG:ssc:100627840 Uniprot:I3LRP3
        Length = 222

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 39/67 (58%), Positives = 46/67 (68%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RT+++  Q   L+ EF  NRYLT RRR E+AN L LNE QIKIWFQN+R K KK S 
Sbjct:   156 KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215

Query:    77 QKNPLAL 83
              K+  AL
Sbjct:   216 MKSKEAL 222


>MGI|MGI:96196 [details] [associations]
            symbol:Hoxc5 "homeobox C5" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048706 "embryonic skeletal system development"
            evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:96196 GO:GO:0005634
            GO:GO:0009952 GO:GO:0030054 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0048706 GeneTree:ENSGT00700000104161
            HOVERGEN:HBG016849 HOGENOM:HOG000231178 KO:K09305 CTD:3222
            eggNOG:NOG286013 OMA:CYSGLDL OrthoDB:EOG4CRM16 EMBL:U28071
            EMBL:AK078527 EMBL:BC115551 EMBL:BC115552 IPI:IPI00134225
            PIR:A60084 RefSeq:NP_783857.1 UniGene:Mm.103825
            ProteinModelPortal:P32043 SMR:P32043 STRING:P32043
            PhosphoSite:P32043 PRIDE:P32043 Ensembl:ENSMUST00000001709
            GeneID:15424 KEGG:mmu:15424 UCSC:uc007xxe.1 InParanoid:P32043
            NextBio:288170 Bgee:P32043 CleanEx:MM_HOXC5 Genevestigator:P32043
            GermOnline:ENSMUSG00000022485 Uniprot:P32043
        Length = 222

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 39/67 (58%), Positives = 46/67 (68%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RT+++  Q   L+ EF  NRYLT RRR E+AN L LNE QIKIWFQN+R K KK S 
Sbjct:   156 KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215

Query:    77 QKNPLAL 83
              K+  AL
Sbjct:   216 MKSKEAL 222


>RGD|1307584 [details] [associations]
            symbol:Hoxc5 "homeo box C5" species:10116 "Rattus norvegicus"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA;ISO] [GO:0030054 "cell junction" evidence=IEA;ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0048706 "embryonic skeletal system development"
            evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            RGD:1307584 GO:GO:0005634 GO:GO:0009952 GO:GO:0030054 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0048706 EMBL:CH474035
            GeneTree:ENSGT00700000104161 KO:K09305 CTD:3222 OMA:CYSGLDL
            OrthoDB:EOG4CRM16 EMBL:AC116663 IPI:IPI00210372
            RefSeq:NP_001101586.1 UniGene:Rn.152771 SMR:D3ZP88
            Ensembl:ENSRNOT00000022247 GeneID:315341 KEGG:rno:315341
            NextBio:669109 Uniprot:D3ZP88
        Length = 222

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 39/67 (58%), Positives = 46/67 (68%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RT+++  Q   L+ EF  NRYLT RRR E+AN L LNE QIKIWFQN+R K KK S 
Sbjct:   156 KRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSK 215

Query:    77 QKNPLAL 83
              K+  AL
Sbjct:   216 MKSKEAL 222


>UNIPROTKB|E1BXV0 [details] [associations]
            symbol:VAX1 "Ventral anterior homeobox 1" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0001764 "neuron
            migration" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0007406 "negative
            regulation of neuroblast proliferation" evidence=IEA] [GO:0007411
            "axon guidance" evidence=IEA] [GO:0007420 "brain development"
            evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
            [GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060021
            "palate development" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0030154 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0000976 GO:GO:0031490
            GeneTree:ENSGT00680000099870 EMBL:AADN02030950 EMBL:AADN02030951
            EMBL:AADN02030952 IPI:IPI00821767 Ensembl:ENSGALT00000038881
            OMA:FEKANIM Uniprot:E1BXV0
        Length = 269

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK 
Sbjct:    91 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 150

Query:    75 SGQKNPL 81
              G+ + L
Sbjct:   151 QGKDSEL 157


>UNIPROTKB|E1C654 [details] [associations]
            symbol:VAX1 "Ventral anterior homeobox 1" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:AADN02030950
            EMBL:AADN02030951 EMBL:AADN02030952 IPI:IPI00682449
            Ensembl:ENSGALT00000033072 Uniprot:E1C654
        Length = 219

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK 
Sbjct:    98 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 157

Query:    75 SGQKNPL 81
              G+ + L
Sbjct:   158 QGKDSEL 164


>UNIPROTKB|F1P5G0 [details] [associations]
            symbol:VAX1 "Ventral anterior homeobox 1" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:AADN02030950
            EMBL:AADN02030951 EMBL:AADN02030952 IPI:IPI01017344
            Ensembl:ENSGALT00000015072 Uniprot:F1P5G0
        Length = 220

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK 
Sbjct:    98 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 157

Query:    75 SGQKNPL 81
              G+ + L
Sbjct:   158 QGKDSEL 164


>UNIPROTKB|F1S4R4 [details] [associations]
            symbol:LOC100739572 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060021
            "palate development" evidence=IEA] [GO:0043010 "camera-type eye
            development" evidence=IEA] [GO:0031490 "chromatin DNA binding"
            evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IEA] [GO:0007406 "negative
            regulation of neuroblast proliferation" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:CU462856
            Ensembl:ENSSSCT00000011671 Uniprot:F1S4R4
        Length = 253

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK 
Sbjct:    19 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 78

Query:    75 SGQKNPL 81
              G+ + L
Sbjct:    79 QGKDSEL 85


>ZFIN|ZDB-GENE-040718-149 [details] [associations]
            symbol:meox1 "mesenchyme homeobox 1" species:7955
            "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-040718-149 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 EMBL:CR847827
            IPI:IPI00865440 RefSeq:NP_001002450.2 UniGene:Dr.83318
            Ensembl:ENSDART00000105661 GeneID:436723 KEGG:dre:436723
            NextBio:20831164 Uniprot:F1Q4R9
        Length = 253

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 33/66 (50%), Positives = 43/66 (65%)

Query:    11 DKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAK 70
             D   K ++ RTAF+ EQL  L+ EFT + YLT  RR E+A  L L E Q+K+WFQN+R K
Sbjct:   165 DSNCKARKERTAFTKEQLRELEAEFTHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMK 224

Query:    71 IKKASG 76
              K+  G
Sbjct:   225 WKRVKG 230


>FB|FBgn0004054 [details] [associations]
            symbol:zen2 "zerknullt-related" species:7227 "Drosophila
            melanogaster" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0007450
            "dorsal/ventral pattern formation, imaginal disc" evidence=NAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            EMBL:AE014297 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311 EMBL:AE001572
            eggNOG:NOG325574 ChiTaRS:br GeneTree:ENSGT00700000104161
            EMBL:X68348 PIR:B43697 RefSeq:NP_476794.1 UniGene:Dm.27226
            ProteinModelPortal:P09090 SMR:P09090 EnsemblMetazoa:FBtr0081671
            GeneID:40827 KEGG:dme:Dmel_CG1048 CTD:40827 FlyBase:FBgn0004054
            InParanoid:P09090 OMA:CWDSNSS OrthoDB:EOG4KD53G PhylomeDB:P09090
            GenomeRNAi:40827 NextBio:820795 Bgee:P09090 GermOnline:CG1048
            Uniprot:P09090
        Length = 252

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             K KR RTAFS  QL  L+ EF  N+YL   RR E++  L L E Q+KIWFQN+R K+KK+
Sbjct:    42 KSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKS 101

Query:    75 SGQKNPL 81
             + +K  +
Sbjct:   102 TNRKGAI 108


>UNIPROTKB|F1S1H4 [details] [associations]
            symbol:MEOX1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071837 "HMG box domain binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IEA] [GO:0001757 "somite specification"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
            GeneTree:ENSGT00660000095141 KO:K09322 OMA:QPPAPVW EMBL:CU928405
            RefSeq:XP_003131424.2 Ensembl:ENSSSCT00000018915 GeneID:100516574
            KEGG:ssc:100516574 Uniprot:F1S1H4
        Length = 254

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 36/77 (46%), Positives = 51/77 (66%)

Query:     9 GKDKR-SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             GK +  SK ++ RTAF+ EQL  L+ EF  + YLT  RR E+A  L L+E Q+K+WFQN+
Sbjct:   163 GKPEAGSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNR 222

Query:    68 RAKIKKASGQKNPLALQ 84
             R K K+  G + P++ Q
Sbjct:   223 RMKWKRVKGGQ-PISPQ 238


>UNIPROTKB|P18264 [details] [associations]
            symbol:ro "Homeobox protein rough" species:7244 "Drosophila
            virilis" [GO:0005634 "nucleus" evidence=ISS] [GO:0007463 "R2/R5
            cell fate commitment" evidence=ISS] [GO:0042067 "establishment of
            ommatidial planar polarity" evidence=ISS] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0042067
            GO:GO:0007601 GO:GO:0043565 GO:GO:0003700 GO:GO:0050896
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:CH940650 KO:K09362 eggNOG:NOG282802 OMA:VANGFMS
            OrthoDB:EOG4P8D17 GO:GO:0007463 EMBL:M35372 PIR:A35967
            RefSeq:XP_002054799.1 STRING:P18264 EnsemblMetazoa:FBtr0238517
            GeneID:6630225 KEGG:dvi:Dvir_GJ22592 FlyBase:FBgn0013136
            InParanoid:P18264 Uniprot:P18264
        Length = 340

 Score = 175 (66.7 bits), Expect = 6.4e-13, P = 6.4e-13
 Identities = 35/62 (56%), Positives = 44/62 (70%)

Query:    12 KRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKI 71
             K  +++R RT FS EQ  RL+VEF  N Y++  RR ELA  L L+E QIKIWFQN+RAK 
Sbjct:   160 KEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLSETQIKIWFQNRRAKD 219

Query:    72 KK 73
             K+
Sbjct:   220 KR 221


>ZFIN|ZDB-GENE-030904-9 [details] [associations]
            symbol:vax1 "ventral anterior homeobox 1"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0061386 "closure of optic fissure"
            evidence=IMP] [GO:0060041 "retina development in camera-type eye"
            evidence=IMP] [GO:0090259 "regulation of retinal ganglion cell axon
            guidance" evidence=IMP] [GO:0021554 "optic nerve development"
            evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-030904-9 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041 GO:GO:0000976
            GO:GO:0061386 eggNOG:NOG323848 GeneTree:ENSGT00680000099870
            GO:GO:0021554 CTD:11023 HOGENOM:HOG000049217 HOVERGEN:HBG007558
            KO:K09318 EMBL:AY185348 EMBL:BC065951 IPI:IPI00512062
            RefSeq:NP_919391.2 UniGene:Dr.134046 ProteinModelPortal:Q801E0
            STRING:Q801E0 Ensembl:ENSDART00000031490 GeneID:373870
            KEGG:dre:373870 InParanoid:Q801E0 OrthoDB:EOG4QVCD6
            NextBio:20813407 Bgee:Q801E0 GO:GO:0090259 Uniprot:Q801E0
        Length = 317

 Score = 174 (66.3 bits), Expect = 6.5e-13, P = 6.5e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK 
Sbjct:    91 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 150

Query:    75 SGQKNPL 81
              G+ + L
Sbjct:   151 QGKDSEL 157


>MGI|MGI:103220 [details] [associations]
            symbol:Meox1 "mesenchyme homeobox 1" species:10090 "Mus
            musculus" [GO:0001757 "somite specification" evidence=IGI]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IGI;IDA]
            [GO:0071837 "HMG box domain binding" evidence=IPI]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:103220 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757 CTD:4222
            eggNOG:NOG282563 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
            OMA:QPPAPVW OrthoDB:EOG46DM3J EMBL:Z15103 EMBL:BC011082
            IPI:IPI00108443 PIR:A49122 RefSeq:NP_034921.1 UniGene:Mm.3404
            ProteinModelPortal:P32442 SMR:P32442 STRING:P32442 PRIDE:P32442
            Ensembl:ENSMUST00000057054 GeneID:17285 KEGG:mmu:17285
            NextBio:291792 Bgee:P32442 CleanEx:MM_MEOX1 Genevestigator:P32442
            GermOnline:ENSMUSG00000001493 Uniprot:P32442
        Length = 253

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 36/77 (46%), Positives = 51/77 (66%)

Query:     9 GKDK-RSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             GK +  SK ++ RTAF+ EQL  L+ EF  + YLT  RR E+A  L L+E Q+K+WFQN+
Sbjct:   162 GKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNR 221

Query:    68 RAKIKKASGQKNPLALQ 84
             R K K+  G + P++ Q
Sbjct:   222 RMKWKRVKGGQ-PVSPQ 237


>RGD|1308911 [details] [associations]
            symbol:Meox1 "mesenchyme homeobox 1" species:10116 "Rattus
            norvegicus" [GO:0001757 "somite specification" evidence=IEA;ISO]
            [GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA;ISO] [GO:0071837 "HMG box
            domain binding" evidence=IEA;ISO] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 RGD:1308911 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH473948
            GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 OMA:QPPAPVW
            OrthoDB:EOG46DM3J IPI:IPI00203787 RefSeq:NP_001102307.1
            UniGene:Rn.149759 Ensembl:ENSRNOT00000028220 GeneID:363684
            KEGG:rno:363684 UCSC:RGD:1308911 NextBio:683991 Uniprot:D4A532
        Length = 253

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 36/77 (46%), Positives = 51/77 (66%)

Query:     9 GKDK-RSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             GK +  SK ++ RTAF+ EQL  L+ EF  + YLT  RR E+A  L L+E Q+K+WFQN+
Sbjct:   162 GKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNR 221

Query:    68 RAKIKKASGQKNPLALQ 84
             R K K+  G + P++ Q
Sbjct:   222 RMKWKRVKGGQ-PVSPQ 237


>ZFIN|ZDB-GENE-980526-533 [details] [associations]
            symbol:hoxc5a "homeo box C5a" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-980526-533 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104161 HOVERGEN:HBG016849
            HOGENOM:HOG000231178 EMBL:BX005254 EMBL:BC163205 IPI:IPI00499962
            UniGene:Dr.132198 Ensembl:ENSDART00000103038 Uniprot:B3DIP7
        Length = 233

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 38/65 (58%), Positives = 44/65 (67%)

Query:    14 SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             S  KR RT+++  Q   L+ EF  NRYLT RRR E+AN L LNE QIKIWFQN+R K KK
Sbjct:   164 SDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKK 223

Query:    74 ASGQK 78
              S  K
Sbjct:   224 DSKLK 228


>UNIPROTKB|Q9PVN2 [details] [associations]
            symbol:VAX1 "Ventral anterior homeobox 1" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0000976 eggNOG:NOG323848 EMBL:AF117299 EMBL:AB032248
            IPI:IPI00603024 RefSeq:NP_990130.1 UniGene:Gga.321
            ProteinModelPortal:Q9PVN2 GeneID:395582 KEGG:gga:395582 CTD:11023
            HOGENOM:HOG000049217 HOVERGEN:HBG007558 KO:K09318 NextBio:20815656
            Uniprot:Q9PVN2
        Length = 327

 Score = 174 (66.3 bits), Expect = 7.3e-13, P = 7.3e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK 
Sbjct:    98 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 157

Query:    75 SGQKNPL 81
              G+ + L
Sbjct:   158 QGKDSEL 164


>UNIPROTKB|F1S4S0 [details] [associations]
            symbol:LOC100739572 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060021
            "palate development" evidence=IEA] [GO:0043010 "camera-type eye
            development" evidence=IEA] [GO:0031490 "chromatin DNA binding"
            evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IEA] [GO:0007406 "negative
            regulation of neuroblast proliferation" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00680000099870 KO:K09318 OMA:ASEDCNK EMBL:CU468444
            RefSeq:XP_001927274.1 UniGene:Ssc.95758 Ensembl:ENSSSCT00000011667
            GeneID:100157019 KEGG:ssc:100157019 Uniprot:F1S4S0
        Length = 333

 Score = 174 (66.3 bits), Expect = 7.8e-13, P = 7.8e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK 
Sbjct:    99 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 158

Query:    75 SGQKNPL 81
              G+ + L
Sbjct:   159 QGKDSEL 165


>UNIPROTKB|E2QUC0 [details] [associations]
            symbol:VAX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060021
            "palate development" evidence=IEA] [GO:0043010 "camera-type eye
            development" evidence=IEA] [GO:0031490 "chromatin DNA binding"
            evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IEA] [GO:0007406 "negative
            regulation of neuroblast proliferation" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
            GO:GO:0001764 GO:GO:0007420 GO:GO:0007406 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010
            GO:GO:0060021 GO:GO:0000976 GO:GO:0031490
            GeneTree:ENSGT00680000099870 CTD:11023 KO:K09318 OMA:ASEDCNK
            EMBL:AAEX03015564 EMBL:AAEX03015565 RefSeq:XP_865035.1
            Ensembl:ENSCAFT00000018920 GeneID:486906 KEGG:cfa:486906
            NextBio:20860611 Uniprot:E2QUC0
        Length = 334

 Score = 174 (66.3 bits), Expect = 7.9e-13, P = 7.9e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK 
Sbjct:    99 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 158

Query:    75 SGQKNPL 81
              G+ + L
Sbjct:   159 QGKDSEL 165


>UNIPROTKB|Q5SQQ9 [details] [associations]
            symbol:VAX1 "Ventral anterior homeobox 1" species:9606
            "Homo sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0007406 "negative regulation of
            neuroblast proliferation" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
            [GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0043010
            "camera-type eye development" evidence=IEA] [GO:0060021 "palate
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
            GO:GO:0001764 GO:GO:0007420 GO:GO:0007406 EMBL:CH471066
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0043010 GO:GO:0060021 GO:GO:0000976
            GO:GO:0031490 eggNOG:NOG323848 EMBL:AL731557 CTD:11023
            HOGENOM:HOG000049217 HOVERGEN:HBG007558 KO:K09318 EMBL:AK127095
            EMBL:BC101694 EMBL:BC101696 IPI:IPI00515064 IPI:IPI00749057
            RefSeq:NP_001106175.1 RefSeq:NP_954582.1 UniGene:Hs.441536
            ProteinModelPortal:Q5SQQ9 SMR:Q5SQQ9 STRING:Q5SQQ9
            PhosphoSite:Q5SQQ9 DMDM:74743553 PRIDE:Q5SQQ9 DNASU:11023
            Ensembl:ENST00000277905 Ensembl:ENST00000369206 GeneID:11023
            KEGG:hsa:11023 UCSC:uc001ldb.1 UCSC:uc009xyx.3
            GeneCards:GC10M118878 HGNC:HGNC:12660 HPA:HPA028946 MIM:604294
            MIM:614402 neXtProt:NX_Q5SQQ9 PharmGKB:PA37283 InParanoid:Q5SQQ9
            OMA:ASEDCNK GenomeRNAi:11023 NextBio:41888 Bgee:Q5SQQ9
            CleanEx:HS_VAX1 Genevestigator:Q5SQQ9 Uniprot:Q5SQQ9
        Length = 334

 Score = 174 (66.3 bits), Expect = 7.9e-13, P = 7.9e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK 
Sbjct:    99 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 158

Query:    75 SGQKNPL 81
              G+ + L
Sbjct:   159 QGKDSEL 165


>RGD|621132 [details] [associations]
            symbol:Vax1 "ventral anterior homeobox 1" species:10116 "Rattus
            norvegicus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA;ISO]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0007399 "nervous system development"
            evidence=ISO] [GO:0007406 "negative regulation of neuroblast
            proliferation" evidence=IEA;ISO] [GO:0007411 "axon guidance"
            evidence=IEA;ISO] [GO:0007417 "central nervous system development"
            evidence=ISO] [GO:0007420 "brain development" evidence=IEA;ISO]
            [GO:0030154 "cell differentiation" evidence=ISO] [GO:0031490
            "chromatin DNA binding" evidence=IEA;ISO] [GO:0035914 "skeletal
            muscle cell differentiation" evidence=ISO] [GO:0043010 "camera-type
            eye development" evidence=IEA;ISO] [GO:0060021 "palate development"
            evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621132
            GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0007420
            GO:GO:0007406 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010 GO:GO:0060021
            GO:GO:0000976 GO:GO:0031490 eggNOG:NOG323848
            GeneTree:ENSGT00680000099870 CTD:11023 HOGENOM:HOG000049217
            HOVERGEN:HBG007558 KO:K09318 OMA:ASEDCNK OrthoDB:EOG4H9XN9
            EMBL:AF113515 IPI:IPI00203938 RefSeq:NP_072158.1 UniGene:Rn.48764
            ProteinModelPortal:Q9JM00 Ensembl:ENSRNOT00000011743 GeneID:64571
            KEGG:rno:64571 InParanoid:Q9JM00 NextBio:613524 ArrayExpress:Q9JM00
            Genevestigator:Q9JM00 GermOnline:ENSRNOG00000008824 Uniprot:Q9JM00
        Length = 336

 Score = 174 (66.3 bits), Expect = 8.1e-13, P = 8.1e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK 
Sbjct:    99 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 158

Query:    75 SGQKNPL 81
              G+ + L
Sbjct:   159 QGKDSEL 165


>UNIPROTKB|Q9JM00 [details] [associations]
            symbol:Vax1 "Ventral anterior homeobox 1" species:10116
            "Rattus norvegicus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621132
            GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0007420
            GO:GO:0007406 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010 GO:GO:0060021
            GO:GO:0000976 GO:GO:0031490 eggNOG:NOG323848
            GeneTree:ENSGT00680000099870 CTD:11023 HOGENOM:HOG000049217
            HOVERGEN:HBG007558 KO:K09318 OMA:ASEDCNK OrthoDB:EOG4H9XN9
            EMBL:AF113515 IPI:IPI00203938 RefSeq:NP_072158.1 UniGene:Rn.48764
            ProteinModelPortal:Q9JM00 Ensembl:ENSRNOT00000011743 GeneID:64571
            KEGG:rno:64571 InParanoid:Q9JM00 NextBio:613524 ArrayExpress:Q9JM00
            Genevestigator:Q9JM00 GermOnline:ENSRNOG00000008824 Uniprot:Q9JM00
        Length = 336

 Score = 174 (66.3 bits), Expect = 8.1e-13, P = 8.1e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK 
Sbjct:    99 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 158

Query:    75 SGQKNPL 81
              G+ + L
Sbjct:   159 QGKDSEL 165


>MGI|MGI:1277163 [details] [associations]
            symbol:Vax1 "ventral anterior homeobox containing gene 1"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IGI]
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0001764 "neuron migration" evidence=IMP]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IMP] [GO:0007406
            "negative regulation of neuroblast proliferation" evidence=IMP]
            [GO:0007411 "axon guidance" evidence=IMP] [GO:0007417 "central
            nervous system development" evidence=IMP] [GO:0007420 "brain
            development" evidence=IMP] [GO:0030154 "cell differentiation"
            evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IDA]
            [GO:0035914 "skeletal muscle cell differentiation" evidence=IMP]
            [GO:0043010 "camera-type eye development" evidence=IGI] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0060021 "palate
            development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:1277163
            GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0007420
            GO:GO:0007406 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010 GO:GO:0060021
            GO:GO:0000976 GO:GO:0035914 GO:GO:0031490 eggNOG:NOG323848
            GeneTree:ENSGT00680000099870 CTD:11023 HOGENOM:HOG000049217
            HOVERGEN:HBG007558 KO:K09318 OMA:ASEDCNK EMBL:AF064554
            EMBL:AB020495 EMBL:BC111818 IPI:IPI00135400 IPI:IPI00762603
            RefSeq:NP_033527.1 UniGene:Mm.23801 ProteinModelPortal:Q2NKI2
            SMR:Q2NKI2 STRING:Q2NKI2 PhosphoSite:Q2NKI2 PRIDE:Q2NKI2
            Ensembl:ENSMUST00000172821 GeneID:22326 KEGG:mmu:22326
            UCSC:uc008ibg.1 InParanoid:Q2NKI2 OrthoDB:EOG4H9XN9 NextBio:302557
            Bgee:Q2NKI2 CleanEx:MM_VAX1 Genevestigator:Q2NKI2 Uniprot:Q2NKI2
        Length = 338

 Score = 174 (66.3 bits), Expect = 8.2e-13, P = 8.2e-13
 Identities = 33/67 (49%), Positives = 47/67 (70%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK 
Sbjct:    99 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD 158

Query:    75 SGQKNPL 81
              G+ + L
Sbjct:   159 QGKDSEL 165


>UNIPROTKB|A8MWF9 [details] [associations]
            symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0001757 "somite specification" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
            RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
            KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
            HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
            IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
            Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
            Bgee:A8MWF9 Uniprot:A8MWF9
        Length = 139

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 34/69 (49%), Positives = 46/69 (66%)

Query:     9 GKDK-RSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             GK +  SK ++ RTAF+ EQL  L+ EF  + YLT  RR E+A  L L+E Q+K+WFQN+
Sbjct:    48 GKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNR 107

Query:    68 RAKIKKASG 76
             R K K+  G
Sbjct:   108 RMKWKRVKG 116


>UNIPROTKB|P50221 [details] [associations]
            symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0001757 "somite specification" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
            binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0007275 "multicellular organismal development" evidence=TAS]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005730
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:CH471178 GO:GO:0001757 EMBL:AC068675 EMBL:U10492 EMBL:U10493
            EMBL:AC004149 EMBL:BC069474 EMBL:BC069506 IPI:IPI00030728
            PIR:I38034 RefSeq:NP_001035091.1 RefSeq:NP_004518.1
            RefSeq:NP_054705.1 UniGene:Hs.438 ProteinModelPortal:P50221
            SMR:P50221 IntAct:P50221 MINT:MINT-202809 STRING:P50221
            DMDM:1709078 PRIDE:P50221 DNASU:4222 Ensembl:ENST00000318579
            Ensembl:ENST00000329168 GeneID:4222 KEGG:hsa:4222 UCSC:uc002idz.3
            CTD:4222 GeneCards:GC17M041728 HGNC:HGNC:7013 HPA:HPA045214
            MIM:600147 neXtProt:NX_P50221 PharmGKB:PA30747 eggNOG:NOG282563
            HOGENOM:HOG000230987 HOVERGEN:HBG052456 InParanoid:P50221 KO:K09322
            OMA:QPPAPVW OrthoDB:EOG46DM3J PhylomeDB:P50221 GenomeRNAi:4222
            NextBio:16659 ArrayExpress:P50221 Bgee:P50221 CleanEx:HS_MEOX1
            Genevestigator:P50221 GermOnline:ENSG00000005102 Uniprot:P50221
        Length = 254

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 34/69 (49%), Positives = 46/69 (66%)

Query:     9 GKDK-RSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             GK +  SK ++ RTAF+ EQL  L+ EF  + YLT  RR E+A  L L+E Q+K+WFQN+
Sbjct:   163 GKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNR 222

Query:    68 RAKIKKASG 76
             R K K+  G
Sbjct:   223 RMKWKRVKG 231


>FB|FBgn0003267 [details] [associations]
            symbol:ro "rough" species:7227 "Drosophila melanogaster"
            [GO:0042067 "establishment of ommatidial planar polarity"
            evidence=IMP] [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
            [GO:0007463 "R2/R5 cell fate commitment" evidence=IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0048054 "R2/R5 cell differentiation"
            evidence=NAS;IMP] [GO:0001012 "RNA polymerase II regulatory region
            DNA binding" evidence=IDA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0048749 "compound eye development" evidence=NAS] [GO:0045464
            "R8 cell fate specification" evidence=TAS] [GO:0045680 "negative
            regulation of R8 cell differentiation" evidence=NAS] [GO:0007460
            "R8 cell fate commitment" evidence=NAS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
            GO:GO:0042067 GO:GO:0045464 GO:GO:0007601 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0050896
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0001012 KO:K09362 GeneTree:ENSGT00700000104129 EMBL:M23629
            EMBL:BT022142 EMBL:X12528 PIR:A30046 PIR:S03168 RefSeq:NP_524521.1
            RefSeq:NP_733173.1 UniGene:Dm.24102 ProteinModelPortal:P10181
            SMR:P10181 IntAct:P10181 STRING:P10181 PRIDE:P10181
            EnsemblMetazoa:FBtr0085090 EnsemblMetazoa:FBtr0085091 GeneID:43234
            KEGG:dme:Dmel_CG6348 UCSC:CG6348-RA CTD:19875 FlyBase:FBgn0003267
            eggNOG:NOG282802 InParanoid:P10181 OMA:VANGFMS OrthoDB:EOG4P8D17
            PhylomeDB:P10181 GenomeRNAi:43234 NextBio:832866 Bgee:P10181
            GermOnline:CG6348 GO:GO:0045680 GO:GO:0007463 Uniprot:P10181
        Length = 350

 Score = 174 (66.3 bits), Expect = 9.2e-13, P = 9.2e-13
 Identities = 35/62 (56%), Positives = 43/62 (69%)

Query:    12 KRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKI 71
             K  +++R RT FS EQ  RL+VEF  N Y++  RR ELA  L L E QIKIWFQN+RAK 
Sbjct:   187 KEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKD 246

Query:    72 KK 73
             K+
Sbjct:   247 KR 248


>UNIPROTKB|A2VDR0 [details] [associations]
            symbol:MEOX1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0071837 "HMG box domain binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IEA] [GO:0001757 "somite specification"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
            GeneTree:ENSGT00660000095141 CTD:4222 eggNOG:NOG282563
            HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 OMA:QPPAPVW
            OrthoDB:EOG46DM3J EMBL:DAAA02049232 EMBL:BC133359 IPI:IPI00702466
            RefSeq:NP_001030453.2 UniGene:Bt.65876 SMR:A2VDR0
            Ensembl:ENSBTAT00000054676 GeneID:529059 KEGG:bta:529059
            InParanoid:A2VDR0 NextBio:20874954 Uniprot:A2VDR0
        Length = 254

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 32/63 (50%), Positives = 43/63 (68%)

Query:    14 SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             SK ++ RTAF+ EQL  L+ EF  + YLT  RR E+A  L L+E Q+K+WFQN+R K K+
Sbjct:   169 SKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKR 228

Query:    74 ASG 76
               G
Sbjct:   229 VKG 231


>UNIPROTKB|E2RFP2 [details] [associations]
            symbol:MEOX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071837 "HMG box domain binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0001757 "somite
            specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
            GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 OMA:QPPAPVW
            EMBL:AAEX03006431 RefSeq:XP_848980.1 ProteinModelPortal:E2RFP2
            Ensembl:ENSCAFT00000022993 GeneID:607271 KEGG:cfa:607271
            NextBio:20893009 Uniprot:E2RFP2
        Length = 254

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 32/63 (50%), Positives = 43/63 (68%)

Query:    14 SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             SK ++ RTAF+ EQL  L+ EF  + YLT  RR E+A  L L+E Q+K+WFQN+R K K+
Sbjct:   169 SKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKR 228

Query:    74 ASG 76
               G
Sbjct:   229 VKG 231


>ZFIN|ZDB-GENE-000823-9 [details] [associations]
            symbol:hoxa5a "homeo box A5a" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-000823-9 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
            EMBL:CR382300 HOVERGEN:HBG016849 EMBL:AF071247 EMBL:DQ060534
            IPI:IPI00485489 RefSeq:NP_571615.1 UniGene:Dr.134275
            ProteinModelPortal:Q9YGT6 SMR:Q9YGT6 Ensembl:ENSDART00000003506
            GeneID:58055 KEGG:dre:58055 CTD:58055 eggNOG:NOG236516
            HOGENOM:HOG000231178 InParanoid:Q9YGT6 OMA:YRDSASM
            OrthoDB:EOG49S677 NextBio:20892319 ArrayExpress:Q9YGT6 Bgee:Q9YGT6
            Uniprot:Q9YGT6
        Length = 265

 Score = 168 (64.2 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 39/81 (48%), Positives = 52/81 (64%)

Query:     1 PRSRRIKSGKDKRS--KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEA 58
             P  R++    D  +  + KRPRTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E 
Sbjct:   173 PWMRKLHISHDNLAGPEGKRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSER 232

Query:    59 QIKIWFQNKRAKIKKASGQKN 79
             QIKIWFQN+R K KK +  K+
Sbjct:   233 QIKIWFQNRRMKWKKDNKLKS 253


>UNIPROTKB|H9L184 [details] [associations]
            symbol:Gga.48067 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0002011
            "morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
            "cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048103 "somatic stem cell division"
            evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
            [GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
            "definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
            stem cell differentiation" evidence=IEA] [GO:2000738 "positive
            regulation of stem cell differentiation" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 EMBL:AADN02014570
            Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
        Length = 102

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:    11 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKK 67


>UNIPROTKB|P14840 [details] [associations]
            symbol:HOXB4 "Homeobox protein Hox-B4" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 CTD:3214 EMBL:X17612 IPI:IPI00572832 PIR:S10092
            RefSeq:NP_990624.1 UniGene:Gga.39784 ProteinModelPortal:P14840
            SMR:P14840 STRING:P14840 GeneID:396230 KEGG:gga:396230
            eggNOG:NOG297644 InParanoid:P14840 NextBio:20816282 Uniprot:P14840
        Length = 245

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   151 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWKK 207


>RGD|1588601 [details] [associations]
            symbol:Hoxd3 "homeo box D3" species:10116 "Rattus norvegicus"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
            [GO:0007160 "cell-matrix adhesion" evidence=IEA;ISO] [GO:0007219
            "Notch signaling pathway" evidence=IEA;ISO] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA;ISO]
            [GO:0010628 "positive regulation of gene expression"
            evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
            morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
            development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
            development" evidence=IEA;ISO] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
            PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
            STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
            Genevestigator:P18867 Uniprot:P18867
        Length = 114

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 37/76 (48%), Positives = 47/76 (61%)

Query:     8 SGKDKRSKEKRPR--TAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQ 65
             +G+ +  + + PR  TA++  QL  L+ EF  NRYL  RRR E+AN L L E QIKIWFQ
Sbjct:     1 TGRTRAHRARHPRGCTAYTSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQ 60

Query:    66 NKRAKIKKASGQKNPL 81
             N+R K KK    K  L
Sbjct:    61 NRRMKYKKDQKAKGIL 76


>UNIPROTKB|P18867 [details] [associations]
            symbol:Hoxd3 "Homeobox protein Hox-D3" species:10116
            "Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
            PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
            STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
            Genevestigator:P18867 Uniprot:P18867
        Length = 114

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 37/76 (48%), Positives = 47/76 (61%)

Query:     8 SGKDKRSKEKRPR--TAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQ 65
             +G+ +  + + PR  TA++  QL  L+ EF  NRYL  RRR E+AN L L E QIKIWFQ
Sbjct:     1 TGRTRAHRARHPRGCTAYTSAQLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQ 60

Query:    66 NKRAKIKKASGQKNPL 81
             N+R K KK    K  L
Sbjct:    61 NRRMKYKKDQKAKGIL 76


>WB|WBGene00003024 [details] [associations]
            symbol:lin-39 species:6239 "Caenorhabditis elegans"
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040026
            "positive regulation of vulval development" evidence=IGI;IMP]
            [GO:0040027 "negative regulation of vulval development"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0016477
            "cell migration" evidence=IMP] [GO:0007411 "axon guidance"
            evidence=IMP] [GO:0040025 "vulval development" evidence=IEP]
            [GO:0042659 "regulation of cell fate specification" evidence=IMP]
            [GO:0051302 "regulation of cell division" evidence=IMP] [GO:0045026
            "plasma membrane fusion" evidence=IMP] [GO:0007265 "Ras protein
            signal transduction" evidence=IEP] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IMP] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0018991 GO:GO:0007411 GO:GO:0007265 GO:GO:0016477
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311
            GO:GO:0040025 GO:GO:0040027 GO:GO:0040026 GO:GO:0042659
            GO:GO:0051302 EMBL:FO080423 GeneTree:ENSGT00700000104189
            GO:GO:0045026 eggNOG:NOG236516 EMBL:L19639 EMBL:L19248 PIR:B40722
            RefSeq:NP_001021164.1 UniGene:Cel.19645 ProteinModelPortal:P34684
            SMR:P34684 IntAct:P34684 MINT:MINT-114843 STRING:P34684
            EnsemblMetazoa:C07H6.7.1 EnsemblMetazoa:C07H6.7.2 GeneID:176068
            KEGG:cel:CELE_C07H6.7 UCSC:C07H6.7.2 CTD:176068 WormBase:C07H6.7
            HOGENOM:HOG000113332 InParanoid:P34684 OMA:KEFHTHK NextBio:890972
            Uniprot:P34684
        Length = 253

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 38/89 (42%), Positives = 53/89 (59%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             P   R+ S       EKR RTA++  Q+  L+ EF  ++YLT +RR E+A+ L L E Q+
Sbjct:   150 PWMTRVHSTTGGSRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQV 209

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLMAQG 89
             KIWFQN+R K KK +  K P+   +M  G
Sbjct:   210 KIWFQNRRMKHKKENKDK-PMTPPMMPFG 237


>ZFIN|ZDB-GENE-990415-112 [details] [associations]
            symbol:hoxc4a "homeo box C4a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-990415-112 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 EMBL:BX005254 EMBL:AF071264 EMBL:BC092923
            EMBL:DQ060552 EMBL:Y14545 IPI:IPI00489611 RefSeq:NP_571197.1
            UniGene:Dr.159439 ProteinModelPortal:Q9PWM3 SMR:Q9PWM3
            Ensembl:ENSDART00000103132 GeneID:30345 KEGG:dre:30345 CTD:30345
            InParanoid:A2BE61 OMA:ERQYNCA NextBio:20806775 Bgee:Q9PWM3
            Uniprot:Q9PWM3
        Length = 268

 Score = 167 (63.8 bits), Expect = 1.8e-12, P = 1.8e-12
 Identities = 34/60 (56%), Positives = 45/60 (75%)

Query:    14 SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             ++ KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   152 AEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKK 211


>UNIPROTKB|Q9YI38 [details] [associations]
            symbol:GGMOXr1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0071837 "HMG box domain binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
            GeneTree:ENSGT00660000095141 CTD:4222 eggNOG:NOG282563
            HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 OMA:QPPAPVW
            OrthoDB:EOG46DM3J EMBL:AADN02070145 EMBL:AF043432 IPI:IPI00581083
            RefSeq:NP_990096.1 UniGene:Gga.288 SMR:Q9YI38
            Ensembl:ENSGALT00000001806 GeneID:395533 KEGG:gga:395533
            InParanoid:Q9YI38 NextBio:20815610 Uniprot:Q9YI38
        Length = 240

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 33/74 (44%), Positives = 46/74 (62%)

Query:     3 SRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKI 62
             S+   S  +  S+ ++ RTAF+ EQL  L+ EF  + YLT  RR E+A  L L E Q+K+
Sbjct:   144 SQPSSSKAEGSSRSRKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKV 203

Query:    63 WFQNKRAKIKKASG 76
             WFQN+R K K+  G
Sbjct:   204 WFQNRRMKWKRVKG 217


>UNIPROTKB|F1N257 [details] [associations]
            symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
            regulation of stem cell differentiation" evidence=IEA] [GO:0060218
            "hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
            "definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
            marrow development" evidence=IEA] [GO:0048536 "spleen development"
            evidence=IEA] [GO:0048103 "somatic stem cell division"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
            "morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
            GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
            IPI:IPI00713167 OMA:RYAACRD GO:GO:0048539 EMBL:DAAA02049065
            Ensembl:ENSBTAT00000043402 Uniprot:F1N257
        Length = 251

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   163 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKK 219


>UNIPROTKB|Q08DG5 [details] [associations]
            symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 eggNOG:NOG305812
            EMBL:BC123761 IPI:IPI00713167 RefSeq:NP_001071582.1
            UniGene:Bt.46279 ProteinModelPortal:Q08DG5 SMR:Q08DG5 PRIDE:Q08DG5
            GeneID:768240 KEGG:bta:768240 CTD:3214 InParanoid:Q08DG5
            NextBio:20918537 Uniprot:Q08DG5
        Length = 251

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   163 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKK 219


>UNIPROTKB|F1PF43 [details] [associations]
            symbol:VAX2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060041
            "retina development in camera-type eye" evidence=IEA] [GO:0048048
            "embryonic eye morphogenesis" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IEA] [GO:0030900 "forebrain development"
            evidence=IEA] [GO:0009950 "dorsal/ventral axis specification"
            evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041
            GO:GO:0007409 GO:GO:0048048 GO:GO:0000976 GO:GO:0031490
            GO:GO:0009950 GeneTree:ENSGT00680000099870 OMA:LGEADHC
            EMBL:AAEX03007653 EMBL:AAEX03007652 Ensembl:ENSCAFT00000005524
            Uniprot:F1PF43
        Length = 247

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 31/59 (52%), Positives = 43/59 (72%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK
Sbjct:    58 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK 116


>UNIPROTKB|F6UWC1 [details] [associations]
            symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            OMA:RYAACRD EMBL:AAEX03006516 Ensembl:ENSCAFT00000026671
            EMBL:AAEX03006515 Uniprot:F6UWC1
        Length = 251

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   163 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKK 219


>UNIPROTKB|P17483 [details] [associations]
            symbol:HOXB4 "Homeobox protein Hox-B4" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0002011 "morphogenesis of
            an epithelial sheet" evidence=IEA] [GO:0008283 "cell proliferation"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0048103 "somatic stem cell
            division" evidence=IEA] [GO:0048536 "spleen development"
            evidence=IEA] [GO:0048539 "bone marrow development" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0060216 "definitive hemopoiesis" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
            organismal development" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:2000738 "positive regulation of stem cell
            differentiation" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0060218 "hematopoietic stem cell differentiation" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0060218 GO:GO:0048536 GO:GO:0048704 GO:GO:0048103
            GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
            GO:GO:2000738 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 EMBL:AF287967 CTD:3214 EMBL:X16174 EMBL:AF307160
            EMBL:BC049204 EMBL:AL137449 IPI:IPI00014540 PIR:B60492 PIR:T46446
            RefSeq:NP_076920.1 UniGene:Hs.664706 ProteinModelPortal:P17483
            SMR:P17483 STRING:P17483 PhosphoSite:P17483 DMDM:547692
            PaxDb:P17483 PeptideAtlas:P17483 PRIDE:P17483
            Ensembl:ENST00000332503 GeneID:3214 KEGG:hsa:3214 UCSC:uc002inp.3
            GeneCards:GC17M046652 HGNC:HGNC:5115 MIM:142965 neXtProt:NX_P17483
            PharmGKB:PA29391 InParanoid:P17483 OMA:RYAACRD GenomeRNAi:3214
            NextBio:12788 Bgee:P17483 CleanEx:HS_HOXB4 Genevestigator:P17483
            GermOnline:ENSG00000182742 GO:GO:0048539 Uniprot:P17483
        Length = 251

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   163 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKK 219


>UNIPROTKB|F1RWG5 [details] [associations]
            symbol:HOXB4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
            regulation of stem cell differentiation" evidence=IEA] [GO:0060218
            "hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
            "definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
            marrow development" evidence=IEA] [GO:0048536 "spleen development"
            evidence=IEA] [GO:0048103 "somatic stem cell division"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
            "morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
            GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011 KO:K09304
            OMA:RYAACRD GO:GO:0048539 EMBL:CU856160 RefSeq:XP_003131596.1
            Ensembl:ENSSSCT00000019089 GeneID:100522341 KEGG:ssc:100522341
            Uniprot:F1RWG5
        Length = 251

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   163 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKK 219


>MGI|MGI:96185 [details] [associations]
            symbol:Hoxb4 "homeobox B4" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0002011 "morphogenesis of
            an epithelial sheet" evidence=IGI] [GO:0003677 "DNA binding"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0008283 "cell proliferation"
            evidence=IMP] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IGI] [GO:0030097 "hemopoiesis"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0048103 "somatic
            stem cell division" evidence=IDA] [GO:0048536 "spleen development"
            evidence=IMP] [GO:0048539 "bone marrow development" evidence=IMP]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
            [GO:0048705 "skeletal system morphogenesis" evidence=IGI;IMP]
            [GO:0060216 "definitive hemopoiesis" evidence=IGI] [GO:0060218
            "hematopoietic stem cell differentiation" evidence=ISO] [GO:2000738
            "positive regulation of stem cell differentiation" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:96185 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
            GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
            GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
            eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 CTD:3214 OMA:RYAACRD GO:GO:0048539 EMBL:M36654
            EMBL:AK133945 EMBL:BC095947 IPI:IPI00109338 PIR:A31757
            RefSeq:NP_034589.3 UniGene:Mm.3546 ProteinModelPortal:P10284
            SMR:P10284 IntAct:P10284 STRING:P10284 PhosphoSite:P10284
            PRIDE:P10284 Ensembl:ENSMUST00000049241 GeneID:15412 KEGG:mmu:15412
            InParanoid:P10284 NextBio:288134 Bgee:P10284 CleanEx:MM_HOXB4
            Genevestigator:P10284 GermOnline:ENSMUSG00000038692 Uniprot:P10284
        Length = 250

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   162 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKK 218


>RGD|1560113 [details] [associations]
            symbol:Hoxb4 "homeo box B4" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA;ISO] [GO:0002011
            "morphogenesis of an epithelial sheet" evidence=IEA;ISO]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008283 "cell
            proliferation" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA;ISO] [GO:0030097 "hemopoiesis"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048103
            "somatic stem cell division" evidence=IEA;ISO] [GO:0048536 "spleen
            development" evidence=IEA;ISO] [GO:0048539 "bone marrow
            development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA;ISO] [GO:0048705 "skeletal
            system morphogenesis" evidence=ISO] [GO:0060216 "definitive
            hemopoiesis" evidence=IEA;ISO] [GO:0060218 "hematopoietic stem cell
            differentiation" evidence=IEA;ISO] [GO:2000738 "positive regulation
            of stem cell differentiation" evidence=IEA;ISO] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1560113
            GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0000122
            GO:GO:0048536 GO:GO:0048704 EMBL:CH473948 GO:GO:0048103
            GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 CTD:3214
            OMA:RYAACRD GO:GO:0048539 EMBL:BC161863 IPI:IPI00199999
            RefSeq:NP_001094257.1 UniGene:Rn.209614 SMR:B1WBS2 STRING:B1WBS2
            Ensembl:ENSRNOT00000010965 GeneID:497988 KEGG:rno:497988
            NextBio:698314 Genevestigator:B1WBS2 Uniprot:B1WBS2
        Length = 250

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   162 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKK 218


>ZFIN|ZDB-GENE-041008-135 [details] [associations]
            symbol:gsx1 "GS homeobox 1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-041008-135 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            CTD:219409 HOGENOM:HOG000010106 HOVERGEN:HBG003555 KO:K09310
            OMA:HNCKCSS OrthoDB:EOG4GTKDV GeneTree:ENSGT00700000104161
            EMBL:BX247876 EMBL:AY486348 IPI:IPI00492455 RefSeq:NP_001012251.1
            UniGene:Dr.91023 SMR:Q5QHS3 Ensembl:ENSDART00000051833
            GeneID:449875 KEGG:dre:449875 InParanoid:Q5QHS3 NextBio:20832927
            Uniprot:Q5QHS3
        Length = 243

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 34/68 (50%), Positives = 44/68 (64%)

Query:     6 IKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQ 65
             I++   +    KR RTAF+  QL  L+ EFT N YL+  RR E+A  L L+E Q+KIWFQ
Sbjct:   126 IENSSSQLQSSKRMRTAFTSTQLLELEREFTSNMYLSRLRRIEIATYLNLSEKQVKIWFQ 185

Query:    66 NKRAKIKK 73
             N+R K KK
Sbjct:   186 NRRVKHKK 193


>ZFIN|ZDB-GENE-990415-105 [details] [associations]
            symbol:hoxb4a "homeo box B4a" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-990415-105 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 EMBL:AL645782 EMBL:AF071252 EMBL:M24085
            EMBL:Y13946 IPI:IPI00499387 PIR:JT0489 RefSeq:NP_571193.1
            UniGene:Dr.133609 ProteinModelPortal:P22574 SMR:P22574
            Ensembl:ENSDART00000012470 GeneID:30340 KEGG:dre:30340 CTD:30340
            InParanoid:P22574 OMA:RSACNEQ NextBio:20806771 ArrayExpress:P22574
            Bgee:P22574 Uniprot:P22574
        Length = 246

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   152 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKK 208


>UNIPROTKB|A4FUC1 [details] [associations]
            symbol:HOXC4 "HOXC4 protein" species:9913 "Bos taurus"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box domain
            binding" evidence=IEA] [GO:0051216 "cartilage development"
            evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0051216 eggNOG:NOG314883
            KO:K09304 GO:GO:0048562 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 OMA:ERQYNCA CTD:3221 EMBL:DAAA02012839
            EMBL:BC114690 IPI:IPI00729483 RefSeq:NP_001095843.1
            UniGene:Bt.29064 STRING:A4FUC1 Ensembl:ENSBTAT00000004277
            GeneID:613740 KEGG:bta:613740 InParanoid:A4FUC1 NextBio:20898740
            Uniprot:A4FUC1
        Length = 264

 Score = 166 (63.5 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   157 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213


>UNIPROTKB|E2QSM9 [details] [associations]
            symbol:HOXC4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837
            "HMG box domain binding" evidence=IEA] [GO:0051216 "cartilage
            development" evidence=IEA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
            OMA:ERQYNCA CTD:3221 EMBL:AAEX03014973 RefSeq:XP_543624.1
            RefSeq:XP_856443.1 Ensembl:ENSCAFT00000010661 GeneID:486498
            KEGG:cfa:486498 NextBio:20860261 Uniprot:E2QSM9
        Length = 264

 Score = 166 (63.5 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   157 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213


>UNIPROTKB|P09017 [details] [associations]
            symbol:HOXC4 "Homeobox protein Hox-C4" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
            [GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
            organismal development" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
            OMA:ERQYNCA EMBL:X07495 EMBL:AY014298 EMBL:AY014297 EMBL:AC023794
            IPI:IPI00295561 PIR:S01030 RefSeq:NP_055435.2 RefSeq:NP_705897.1
            UniGene:Hs.549040 ProteinModelPortal:P09017 SMR:P09017
            IntAct:P09017 STRING:P09017 PhosphoSite:P09017 DMDM:281185468
            PRIDE:P09017 DNASU:3221 Ensembl:ENST00000303406
            Ensembl:ENST00000430889 GeneID:3221 KEGG:hsa:3221 UCSC:uc001seu.3
            CTD:3221 GeneCards:GC12P054410 H-InvDB:HIX0079410
            H-InvDB:HIX0079484 H-InvDB:HIX0171647 HGNC:HGNC:5126 MIM:142974
            neXtProt:NX_P09017 PharmGKB:PA29401 InParanoid:P09017
            PhylomeDB:P09017 GenomeRNAi:3221 NextBio:12814 Bgee:P09017
            Genevestigator:P09017 GermOnline:ENSG00000198353 Uniprot:P09017
        Length = 264

 Score = 166 (63.5 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   157 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213


>UNIPROTKB|F1SR58 [details] [associations]
            symbol:HOXC4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
            domain binding" evidence=IEA] [GO:0051216 "cartilage development"
            evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
            OMA:ERQYNCA EMBL:CU633419 RefSeq:XP_001925163.2
            Ensembl:ENSSSCT00000000306 GeneID:100154759 KEGG:ssc:100154759
            Uniprot:F1SR58
        Length = 264

 Score = 166 (63.5 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   157 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213


>MGI|MGI:96195 [details] [associations]
            symbol:Hoxc4 "homeobox C4" species:10090 "Mus musculus"
            [GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
            [GO:0071837 "HMG box domain binding" evidence=IPI]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:96195 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
            OMA:ERQYNCA CTD:3221 EMBL:D11328 EMBL:S62287 EMBL:X69019
            EMBL:M81660 IPI:IPI00122942 PIR:S35219 RefSeq:NP_038581.2
            UniGene:Mm.1351 ProteinModelPortal:Q08624 SMR:Q08624 STRING:Q08624
            PhosphoSite:Q08624 PRIDE:Q08624 Ensembl:ENSMUST00000100164
            GeneID:15423 KEGG:mmu:15423 UCSC:uc007xxg.1 InParanoid:Q08624
            NextBio:288166 Bgee:Q08624 CleanEx:MM_HOXC4 Genevestigator:Q08624
            GermOnline:ENSMUSG00000075394 Uniprot:Q08624
        Length = 264

 Score = 166 (63.5 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   157 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213


>UNIPROTKB|E1B853 [details] [associations]
            symbol:VAX1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060021 "palate
            development" evidence=IEA] [GO:0043010 "camera-type eye
            development" evidence=IEA] [GO:0031490 "chromatin DNA binding"
            evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IEA] [GO:0007406 "negative
            regulation of neuroblast proliferation" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0007420
            GO:GO:0007406 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010 GO:GO:0060021
            GO:GO:0031490 GeneTree:ENSGT00680000099870 OMA:ASEDCNK
            EMBL:DAAA02059342 EMBL:DAAA02059343 IPI:IPI00700524
            Ensembl:ENSBTAT00000032764 Uniprot:E1B853
        Length = 334

 Score = 170 (64.9 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 33/67 (49%), Positives = 46/67 (68%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q K+WFQN+R K KK 
Sbjct:    99 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQXKVWFQNRRTKQKKD 158

Query:    75 SGQKNPL 81
              G+ + L
Sbjct:   159 QGKDSEL 165


>UNIPROTKB|F6USR4 [details] [associations]
            symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
            specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0007519 "skeletal muscle tissue development" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
            development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
            EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
            IPI:IPI00821029 ProteinModelPortal:F6USR4
            Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
        Length = 154

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 31/63 (49%), Positives = 42/63 (66%)

Query:    14 SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             SK ++ RTAF+ EQ+  L+ EF  + YLT  RR E+A  L L E Q+K+WFQN+R K K+
Sbjct:    35 SKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKR 94

Query:    74 ASG 76
               G
Sbjct:    95 VKG 97


>WB|WBGene00000434 [details] [associations]
            symbol:ceh-9 species:6239 "Caenorhabditis elegans"
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00700000104206 EMBL:FO081483
            EMBL:X52811 PIR:S13129 RefSeq:NP_001021797.1 UniGene:Cel.30778
            ProteinModelPortal:P56407 SMR:P56407 EnsemblMetazoa:Y65B4BR.9
            GeneID:267057 KEGG:cel:CELE_Y65B4BR.9 UCSC:Y65B4BR.9 CTD:267057
            WormBase:Y65B4BR.9 eggNOG:NOG237842 InParanoid:P56407 OMA:FSGKQVF
            NextBio:953494 Uniprot:P56407
        Length = 147

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 31/69 (44%), Positives = 45/69 (65%)

Query:    10 KDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRA 69
             K +++K K+ RT FSG+Q+  L+ +F   +YL+   R ELA  L + E Q+KIWFQN+R 
Sbjct:    64 KCQKTKRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRT 123

Query:    70 KIKKASGQK 78
             K KK   +K
Sbjct:   124 KWKKIESEK 132


>UNIPROTKB|P50577 [details] [associations]
            symbol:DLX5 "Homeobox protein DLX-5" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001649
            "osteoblast differentiation" evidence=IEA] [GO:0001958
            "endochondral ossification" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008283
            "cell proliferation" evidence=IEA] [GO:0030326 "embryonic limb
            morphogenesis" evidence=IEA] [GO:0030855 "epithelial cell
            differentiation" evidence=IEA] [GO:0042472 "inner ear
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048646 "anatomical structure formation involved in
            morphogenesis" evidence=IEA] [GO:0050679 "positive regulation of
            epithelial cell proliferation" evidence=IEA] [GO:0060021 "palate
            development" evidence=IEA] [GO:0060166 "olfactory pit development"
            evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
            [GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0090263
            "positive regulation of canonical Wnt receptor signaling pathway"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008283 GO:GO:0045944
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0090263
            GO:GO:0001503 GO:GO:0050679 eggNOG:NOG263092
            GeneTree:ENSGT00700000104439 HOVERGEN:HBG005493
            HOGENOM:HOG000231940 InterPro:IPR022135 Pfam:PF12413 KO:K09315
            EMBL:U25274 EMBL:AF096161 IPI:IPI00578903 RefSeq:NP_989490.1
            UniGene:Gga.919 ProteinModelPortal:P50577 SMR:P50577 STRING:P50577
            Ensembl:ENSGALT00000015249 GeneID:373969 KEGG:gga:373969 CTD:1749
            InParanoid:P50577 OMA:QSPAVWD OrthoDB:EOG49PB05 NextBio:20813498
            ArrayExpress:P50577 Uniprot:P50577
        Length = 286

 Score = 167 (63.8 bits), Expect = 2.6e-12, P = 2.6e-12
 Identities = 37/78 (47%), Positives = 51/78 (65%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             R+ +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA  LGL + Q+KIWF
Sbjct:   127 RMVNGKPK--KVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 184

Query:    65 QNKRAKIKKA--SGQKNP 80
             QNKR+KIKK   +G+  P
Sbjct:   185 QNKRSKIKKIMKNGEMPP 202


>FB|FBgn0025776 [details] [associations]
            symbol:ind "intermediate neuroblasts defective" species:7227
            "Drosophila melanogaster" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS;IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS;IDA] [GO:0010629
            "negative regulation of gene expression" evidence=IMP] [GO:0007417
            "central nervous system development" evidence=NAS;IMP] [GO:0007419
            "ventral cord development" evidence=NAS;TAS] [GO:0007400
            "neuroblast fate determination" evidence=TAS] [GO:0009953
            "dorsal/ventral pattern formation" evidence=TAS] [GO:0007398
            "ectoderm development" evidence=TAS] [GO:0007420 "brain
            development" evidence=TAS] [GO:0007389 "pattern specification
            process" evidence=NAS] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IDA] [GO:0008134 "transcription factor binding"
            evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0007420 EMBL:AE014296
            GO:GO:0043565 GO:GO:0007419 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007400
            GO:GO:0000122 GO:GO:0009953 GO:GO:0007398 KO:K09310 HSSP:P14653
            FlyBase:FBgn0025776 EMBL:BT029146 EMBL:BK002146 RefSeq:NP_996087.1
            UniGene:Dm.1954 SMR:Q7KUL4 STRING:Q7KUL4 GeneID:2768974
            KEGG:dme:Dmel_CG11551 UCSC:CG11551-RA InParanoid:Q7KUL4 OMA:FKHESSC
            GenomeRNAi:2768974 NextBio:848895 Uniprot:Q7KUL4
        Length = 391

 Score = 171 (65.3 bits), Expect = 2.7e-12, P = 2.7e-12
 Identities = 36/70 (51%), Positives = 46/70 (65%)

Query:    11 DKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAK 70
             D     KR RTAF+  QL  L+ EF+ N YL+  RR E+AN L L+E Q+KIWFQN+R K
Sbjct:   293 DYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVK 352

Query:    71 IKKASGQKNP 80
              KK  G ++P
Sbjct:   353 QKKG-GSESP 361


>UNIPROTKB|E2QT52 [details] [associations]
            symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 Ensembl:ENSCAFT00000026671 Uniprot:E2QT52
        Length = 274

 Score = 166 (63.5 bits), Expect = 2.7e-12, P = 2.7e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   170 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWKK 226


>UNIPROTKB|Q1RMR7 [details] [associations]
            symbol:DLX5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0090263 "positive
            regulation of canonical Wnt receptor signaling pathway"
            evidence=IEA] [GO:0071837 "HMG box domain binding" evidence=IEA]
            [GO:0060325 "face morphogenesis" evidence=IEA] [GO:0060166
            "olfactory pit development" evidence=IEA] [GO:0060021 "palate
            development" evidence=IEA] [GO:0050679 "positive regulation of
            epithelial cell proliferation" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
            [GO:0030855 "epithelial cell differentiation" evidence=IEA]
            [GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
            [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007411 "axon
            guidance" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0001958 "endochondral ossification" evidence=IEA] [GO:0001649
            "osteoblast differentiation" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411
            GO:GO:0008283 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042472
            GO:GO:0030326 GO:GO:0001649 GO:GO:0060166 GO:GO:0060021
            GO:GO:0000976 GO:GO:0090263 GO:GO:0060325 GO:GO:0050679
            GO:GO:0030855 GO:GO:0001958 eggNOG:NOG263092
            GeneTree:ENSGT00700000104439 HOVERGEN:HBG005493
            HOGENOM:HOG000231940 InterPro:IPR022135 Pfam:PF12413 KO:K09315
            CTD:1749 OMA:QSPAVWD OrthoDB:EOG49PB05 EMBL:DAAA02009827
            EMBL:BC114749 IPI:IPI00692479 RefSeq:NP_001068781.1
            UniGene:Bt.16059 SMR:Q1RMR7 STRING:Q1RMR7
            Ensembl:ENSBTAT00000024811 GeneID:507415 KEGG:bta:507415
            InParanoid:Q1RMR7 NextBio:20868046 Uniprot:Q1RMR7
        Length = 289

 Score = 167 (63.8 bits), Expect = 2.8e-12, P = 2.8e-12
 Identities = 37/78 (47%), Positives = 51/78 (65%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             R+ +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA  LGL + Q+KIWF
Sbjct:   128 RMVNGKPK--KVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 185

Query:    65 QNKRAKIKKA--SGQKNP 80
             QNKR+KIKK   +G+  P
Sbjct:   186 QNKRSKIKKIMKNGEMPP 203


>UNIPROTKB|E2RJY3 [details] [associations]
            symbol:DLX5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090263
            "positive regulation of canonical Wnt receptor signaling pathway"
            evidence=IEA] [GO:0071837 "HMG box domain binding" evidence=IEA]
            [GO:0060325 "face morphogenesis" evidence=IEA] [GO:0060166
            "olfactory pit development" evidence=IEA] [GO:0060021 "palate
            development" evidence=IEA] [GO:0050679 "positive regulation of
            epithelial cell proliferation" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
            [GO:0030855 "epithelial cell differentiation" evidence=IEA]
            [GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
            [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007411 "axon
            guidance" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0001958 "endochondral ossification" evidence=IEA] [GO:0001649
            "osteoblast differentiation" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007411
            GO:GO:0008283 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042472
            GO:GO:0030326 GO:GO:0001649 GO:GO:0060166 GO:GO:0060021
            GO:GO:0000976 GO:GO:0090263 GO:GO:0060325 GO:GO:0050679
            GO:GO:0030855 GO:GO:0001958 GeneTree:ENSGT00700000104439
            InterPro:IPR022135 Pfam:PF12413 KO:K09315 CTD:1749 OMA:QSPAVWD
            EMBL:AAEX03009321 RefSeq:XP_850412.1 ProteinModelPortal:E2RJY3
            Ensembl:ENSCAFT00000003444 GeneID:482313 KEGG:cfa:482313
            NextBio:20856936 Uniprot:E2RJY3
        Length = 289

 Score = 167 (63.8 bits), Expect = 2.8e-12, P = 2.8e-12
 Identities = 37/78 (47%), Positives = 51/78 (65%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             R+ +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA  LGL + Q+KIWF
Sbjct:   128 RMVNGKPK--KVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 185

Query:    65 QNKRAKIKKA--SGQKNP 80
             QNKR+KIKK   +G+  P
Sbjct:   186 QNKRSKIKKIMKNGEMPP 203


>UNIPROTKB|P56178 [details] [associations]
            symbol:DLX5 "Homeobox protein DLX-5" species:9606 "Homo
            sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007411 "axon
            guidance" evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
            evidence=IEA] [GO:0030855 "epithelial cell differentiation"
            evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
            [GO:0045669 "positive regulation of osteoblast differentiation"
            evidence=IEA] [GO:0048646 "anatomical structure formation involved
            in morphogenesis" evidence=IEA] [GO:0050679 "positive regulation of
            epithelial cell proliferation" evidence=IEA] [GO:0060021 "palate
            development" evidence=IEA] [GO:0060166 "olfactory pit development"
            evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
            [GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0090263
            "positive regulation of canonical Wnt receptor signaling pathway"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0008283 "cell
            proliferation" evidence=IDA] [GO:0001649 "osteoblast
            differentiation" evidence=ISS] [GO:0001958 "endochondral
            ossification" evidence=ISS] [GO:0001501 "skeletal system
            development" evidence=TAS] [GO:0007399 "nervous system development"
            evidence=TAS] [GO:0030509 "BMP signaling pathway" evidence=ISS]
            [GO:0071773 "cellular response to BMP stimulus" evidence=ISS]
            [GO:1901522 "positive regulation of transcription from RNA
            polymerase II promoter involved in cellular response to chemical
            stimulus" evidence=ISS] [GO:0000978 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding"
            evidence=ISS] [GO:0001077 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=ISS]
            [GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0007411
            GO:GO:0007399 GO:GO:0008283 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000978 GO:GO:0001077
            GO:GO:0000790 GO:GO:0042472 GO:GO:0030326 GO:GO:0030509
            GO:GO:0071773 GO:GO:0045669 GO:GO:0001649 GO:GO:0060166
            GO:GO:0060021 GO:GO:0090263 GO:GO:0060325 GO:GO:0050679
            GO:GO:0030855 GO:GO:1901522 GO:GO:0001958 eggNOG:NOG263092
            HOVERGEN:HBG005493 HOGENOM:HOG000231940 InterPro:IPR022135
            Pfam:PF12413 KO:K09315 CTD:1749 OMA:QSPAVWD OrthoDB:EOG49PB05
            EMBL:AK023493 EMBL:AC004774 EMBL:BC006226 IPI:IPI00008192
            PIR:C53495 RefSeq:NP_005212.1 UniGene:Hs.99348 PDB:2DJN PDBsum:2DJN
            ProteinModelPortal:P56178 SMR:P56178 STRING:P56178
            PhosphoSite:P56178 DMDM:12644329 PaxDb:P56178 PRIDE:P56178
            DNASU:1749 Ensembl:ENST00000222598 GeneID:1749 KEGG:hsa:1749
            UCSC:uc003uon.3 GeneCards:GC07M096649 HGNC:HGNC:2918 HPA:HPA005670
            MIM:220600 MIM:600028 neXtProt:NX_P56178 Orphanet:71271
            PharmGKB:PA27373 InParanoid:P56178 PhylomeDB:P56178
            EvolutionaryTrace:P56178 GenomeRNAi:1749 NextBio:7097
            ArrayExpress:P56178 Bgee:P56178 CleanEx:HS_DLX5
            Genevestigator:P56178 GermOnline:ENSG00000105880 Uniprot:P56178
        Length = 289

 Score = 167 (63.8 bits), Expect = 2.8e-12, P = 2.8e-12
 Identities = 37/78 (47%), Positives = 51/78 (65%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             R+ +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA  LGL + Q+KIWF
Sbjct:   128 RMVNGKPK--KVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 185

Query:    65 QNKRAKIKKA--SGQKNP 80
             QNKR+KIKK   +G+  P
Sbjct:   186 QNKRSKIKKIMKNGEMPP 203


>MGI|MGI:101926 [details] [associations]
            symbol:Dlx5 "distal-less homeobox 5" species:10090 "Mus
            musculus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0001503
            "ossification" evidence=IEA] [GO:0001649 "osteoblast
            differentiation" evidence=IDA] [GO:0001958 "endochondral
            ossification" evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;IMP] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007409 "axonogenesis"
            evidence=IMP] [GO:0007411 "axon guidance" evidence=IMP] [GO:0008283
            "cell proliferation" evidence=ISO] [GO:0030326 "embryonic limb
            morphogenesis" evidence=IGI] [GO:0030855 "epithelial cell
            differentiation" evidence=IGI] [GO:0042472 "inner ear
            morphogenesis" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0043583 "ear development" evidence=IMP]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=ISO;IDA] [GO:0045669 "positive regulation of osteoblast
            differentiation" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IGI] [GO:0048646 "anatomical structure formation
            involved in morphogenesis" evidence=IGI] [GO:0050679 "positive
            regulation of epithelial cell proliferation" evidence=IGI]
            [GO:0060021 "palate development" evidence=IGI;IMP] [GO:0060166
            "olfactory pit development" evidence=IMP] [GO:0060322 "head
            development" evidence=IGI] [GO:0060325 "face morphogenesis"
            evidence=IMP] [GO:0060349 "bone morphogenesis" evidence=IMP]
            [GO:0071837 "HMG box domain binding" evidence=IPI] [GO:0090263
            "positive regulation of canonical Wnt receptor signaling pathway"
            evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:101926
            GO:GO:0005737 GO:GO:0007411 GO:GO:0008283 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000978
            GO:GO:0001077 GO:GO:0000790 GO:GO:0042472 GO:GO:0030326
            GO:GO:0030509 GO:GO:0071773 GO:GO:0045669 GO:GO:0001649
            GO:GO:0060166 GO:GO:0060021 GO:GO:0090263 GO:GO:0060325
            GO:GO:0050679 GO:GO:0030855 GO:GO:1901522 GO:GO:0001958
            eggNOG:NOG263092 HOVERGEN:HBG005493 HOGENOM:HOG000231940
            InterPro:IPR022135 Pfam:PF12413 KO:K09315 CTD:1749 OMA:QSPAVWD
            OrthoDB:EOG49PB05 EMBL:U67840 EMBL:AF033011 EMBL:AF022075
            EMBL:AF022076 EMBL:AF022077 EMBL:AF072452 EMBL:AF072453
            IPI:IPI00108386 IPI:IPI00228527 IPI:IPI00228528 RefSeq:NP_034186.2
            RefSeq:NP_942151.1 UniGene:Mm.4873 ProteinModelPortal:P70396
            SMR:P70396 IntAct:P70396 STRING:P70396 PhosphoSite:P70396
            PRIDE:P70396 DNASU:13395 Ensembl:ENSMUST00000052609 GeneID:13395
            KEGG:mmu:13395 UCSC:uc009awy.1 InParanoid:P70396 NextBio:283772
            Bgee:P70396 CleanEx:MM_DLX5 Genevestigator:P70396
            GermOnline:ENSMUSG00000029755 Uniprot:P70396
        Length = 289

 Score = 167 (63.8 bits), Expect = 2.8e-12, P = 2.8e-12
 Identities = 37/78 (47%), Positives = 51/78 (65%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             R+ +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA  LGL + Q+KIWF
Sbjct:   128 RMVNGKPK--KVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 185

Query:    65 QNKRAKIKKA--SGQKNP 80
             QNKR+KIKK   +G+  P
Sbjct:   186 QNKRSKIKKIMKNGEMPP 203


>RGD|2506 [details] [associations]
            symbol:Dlx5 "distal-less homeobox 5" species:10116 "Rattus
          norvegicus" [GO:0000976 "transcription regulatory region
          sequence-specific DNA binding" evidence=IEA] [GO:0001649 "osteoblast
          differentiation" evidence=ISO;ISS] [GO:0001958 "endochondral
          ossification" evidence=ISO;ISS] [GO:0003677 "DNA binding"
          evidence=ISO] [GO:0003700 "sequence-specific DNA binding
          transcription factor activity" evidence=TAS] [GO:0005634 "nucleus"
          evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
          [GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006355
          "regulation of transcription, DNA-dependent" evidence=ISO]
          [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411 "axon guidance"
          evidence=IEA;ISO] [GO:0008283 "cell proliferation" evidence=ISO;ISS]
          [GO:0030326 "embryonic limb morphogenesis" evidence=IEA;ISO]
          [GO:0030855 "epithelial cell differentiation" evidence=IEA;ISO]
          [GO:0042472 "inner ear morphogenesis" evidence=IEA;ISO] [GO:0043583
          "ear development" evidence=ISO] [GO:0044212 "transcription regulatory
          region DNA binding" evidence=ISO;ISS] [GO:0045669 "positive
          regulation of osteoblast differentiation" evidence=IMP] [GO:0045893
          "positive regulation of transcription, DNA-dependent"
          evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
          from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048646
          "anatomical structure formation involved in morphogenesis"
          evidence=ISO] [GO:0050679 "positive regulation of epithelial cell
          proliferation" evidence=IEA;ISO] [GO:0060021 "palate development"
          evidence=IEA;ISO] [GO:0060166 "olfactory pit development"
          evidence=IEA;ISO] [GO:0060322 "head development" evidence=ISO]
          [GO:0060325 "face morphogenesis" evidence=IEA;ISO] [GO:0060349 "bone
          morphogenesis" evidence=ISO] [GO:0071837 "HMG box domain binding"
          evidence=IEA;ISO] [GO:0090263 "positive regulation of canonical Wnt
          receptor signaling pathway" evidence=IEA;ISO] [GO:0005730 "nucleolus"
          evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
          InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
          PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:2506 GO:GO:0005634
          GO:GO:0005737 GO:GO:0007411 GO:GO:0045893 GO:GO:0008283 GO:GO:0045944
          GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
          PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0044212 GO:GO:0042472
          GO:GO:0030326 GO:GO:0045669 GO:GO:0001649 GO:GO:0060166 GO:GO:0060021
          GO:GO:0000976 GO:GO:0090263 GO:GO:0060325 GO:GO:0050679 GO:GO:0030855
          GO:GO:0001958 eggNOG:NOG263092 GeneTree:ENSGT00700000104439
          HOVERGEN:HBG005493 HOGENOM:HOG000231940 InterPro:IPR022135
          Pfam:PF12413 KO:K09315 CTD:1749 OrthoDB:EOG49PB05 EMBL:D31734
          EMBL:L24443 IPI:IPI00325241 PIR:I53082 PIR:S48664 RefSeq:NP_037075.1
          UniGene:Rn.11248 ProteinModelPortal:P50575 SMR:P50575 STRING:P50575
          Ensembl:ENSRNOT00000014946 GeneID:25431 KEGG:rno:25431 UCSC:RGD:2506
          InParanoid:P50575 NextBio:606625 ArrayExpress:P50575
          Genevestigator:P50575 GermOnline:ENSRNOG00000010905 Uniprot:P50575
        Length = 289

 Score = 167 (63.8 bits), Expect = 2.8e-12, P = 2.8e-12
 Identities = 37/78 (47%), Positives = 51/78 (65%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             R+ +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA  LGL + Q+KIWF
Sbjct:   128 RMVNGKPK--KVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 185

Query:    65 QNKRAKIKKA--SGQKNP 80
             QNKR+KIKK   +G+  P
Sbjct:   186 QNKRSKIKKIMKNGEMPP 203


>UNIPROTKB|F1NZJ3 [details] [associations]
            symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0048863
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
            UniGene:Gga.54375 CTD:3233 EMBL:AADN02020023 IPI:IPI01017209
            RefSeq:NP_001012293.1 RefSeq:XP_421990.1 Ensembl:ENSGALT00000038691
            GeneID:424139 KEGG:gga:424139 OMA:SRACSQQ NextBio:20826511
            Uniprot:F1NZJ3
        Length = 237

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   147 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 203


>UNIPROTKB|P17278 [details] [associations]
            symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG314883 HOGENOM:HOG000231179
            HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 EMBL:X52671 EMBL:X52672
            IPI:IPI00600943 PIR:S09256 UniGene:Gga.54375
            ProteinModelPortal:P17278 SMR:P17278 STRING:P17278
            InParanoid:P17278 Uniprot:P17278
        Length = 235

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   145 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 201


>UNIPROTKB|E2RGY0 [details] [associations]
            symbol:HOXD4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 OMA:EQGADYY EMBL:AAEX03017790
            EMBL:AAEX03017791 Ensembl:ENSCAFT00000021336 Uniprot:E2RGY0
        Length = 254

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   152 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 208


>UNIPROTKB|P09016 [details] [associations]
            symbol:HOXD4 "Homeobox protein Hox-D4" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0048704 eggNOG:NOG314883 KO:K09304
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
            EMBL:X17360 EMBL:X04706 EMBL:AK313885 EMBL:BC016763 EMBL:BC074797
            IPI:IPI00012390 PIR:S10985 RefSeq:NP_055436.2 UniGene:Hs.591609
            ProteinModelPortal:P09016 SMR:P09016 STRING:P09016
            PhosphoSite:P09016 DMDM:20141491 PRIDE:P09016
            Ensembl:ENST00000306324 GeneID:3233 KEGG:hsa:3233 UCSC:uc002uks.3
            CTD:3233 GeneCards:GC02P177022 HGNC:HGNC:5138 MIM:142981
            neXtProt:NX_P09016 PharmGKB:PA29412 InParanoid:P09016 OMA:EQGADYY
            PhylomeDB:P09016 GenomeRNAi:3233 NextBio:12865 Bgee:P09016
            CleanEx:HS_HOXD4 Genevestigator:P09016 GermOnline:ENSG00000170166
            Uniprot:P09016
        Length = 255

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   155 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 211


>MGI|MGI:96208 [details] [associations]
            symbol:Hoxd4 "homeobox D4" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IGI;IMP] [GO:0048863 "stem cell differentiation"
            evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:96208 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
            eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 EMBL:AL928644 UniGene:Mm.430708
            GermOnline:ENSMUSG00000042464 CTD:3233 OMA:EQGADYY EMBL:J03770
            EMBL:U77364 EMBL:AK135479 EMBL:M87804 IPI:IPI00308730 PIR:A36170
            PIR:E42694 RefSeq:NP_034599.2 UniGene:Mm.482194
            ProteinModelPortal:P10628 SMR:P10628 STRING:P10628
            PhosphoSite:P10628 PRIDE:P10628 Ensembl:ENSMUST00000047904
            Ensembl:ENSMUST00000111980 GeneID:15436 KEGG:mmu:15436
            UCSC:uc008kef.1 InParanoid:A2ASN3 NextBio:288210 Bgee:P10628
            Genevestigator:P10628 Uniprot:P10628
        Length = 250

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   153 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 209


>RGD|1309690 [details] [associations]
            symbol:Hoxd4 "homeo box D4" species:10116 "Rattus norvegicus"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA;ISO] [GO:0048863 "stem cell differentiation"
            evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:1309690 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0048863 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0048704 EMBL:CH473949 KO:K09304
            OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY IPI:IPI00389332
            RefSeq:NP_001099355.1 UniGene:Rn.141410 Ensembl:ENSRNOT00000002145
            GeneID:288153 KEGG:rno:288153 UCSC:RGD:1309690 NextBio:627686
            Uniprot:D4ACE1
        Length = 251

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   153 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 209


>ZFIN|ZDB-GENE-980526-214 [details] [associations]
            symbol:hoxd4a "homeo box D4a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-980526-214 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:BX322661 EMBL:BC162966
            EMBL:BC162983 EMBL:BC163059 IPI:IPI00492173 RefSeq:NP_001119917.1
            UniGene:Dr.75800 SMR:B0S5Y5 STRING:B0S5Y5
            Ensembl:ENSDART00000082355 GeneID:30329 KEGG:dre:30329 CTD:30329
            NextBio:20806762 Uniprot:B0S5Y5
        Length = 256

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   167 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 223


>ZFIN|ZDB-GENE-990415-75 [details] [associations]
            symbol:flh "floating head" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0030325 "adrenal gland
            development" evidence=IMP] [GO:0048319 "axial mesoderm
            morphogenesis" evidence=IGI;IMP] [GO:0061371 "determination of
            heart left/right asymmetry" evidence=IMP] [GO:0021982 "pineal gland
            development" evidence=IMP] [GO:0035050 "embryonic heart tube
            development" evidence=IMP] [GO:0003143 "embryonic heart tube
            morphogenesis" evidence=IMP] [GO:2000223 "regulation of BMP
            signaling pathway involved in heart jogging" evidence=IMP]
            [GO:0014028 "notochord formation" evidence=IMP] [GO:0001947 "heart
            looping" evidence=IMP] [GO:0007368 "determination of left/right
            symmetry" evidence=IMP] [GO:0032835 "glomerulus development"
            evidence=IMP] [GO:0003160 "endocardium morphogenesis" evidence=IMP]
            [GO:0003140 "determination of left/right asymmetry in lateral
            mesoderm" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-990415-75 GO:GO:0005634 GO:GO:0030325
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
            KO:K09311 GO:GO:0001947 GO:GO:0032835 GO:GO:0003160 HSSP:P06602
            GO:GO:0003140 GO:GO:2000223 GO:GO:0014028 GO:GO:0048319 EMBL:L48017
            EMBL:BC162344 EMBL:AY214391 IPI:IPI00485170 PIR:S60249
            RefSeq:NP_571130.1 UniGene:Dr.352 STRING:Q90461 GeneID:30260
            KEGG:dre:30260 CTD:30260 HOVERGEN:HBG098267 InParanoid:Q90461
            NextBio:20806708 GO:GO:0021982 Uniprot:Q90461
        Length = 241

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 33/66 (50%), Positives = 44/66 (66%)

Query:    10 KDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRA 69
             K K  K KR RT+F+ +QLSRL+ EF   +Y+    R  LA+ L L EAQ+K+WFQN+R 
Sbjct:   128 KHKSGKSKRMRTSFTNDQLSRLEKEFARQQYMVGSERFLLASALQLTEAQVKVWFQNRRI 187

Query:    70 KIKKAS 75
             K +K S
Sbjct:   188 KWRKQS 193


>UNIPROTKB|F1RZG0 [details] [associations]
            symbol:HOXD4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
            differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
            KO:K09304 OMA:EQGADYY EMBL:CU570829 RefSeq:XP_003133546.1
            Ensembl:ENSSSCT00000017405 GeneID:100515690 KEGG:ssc:100515690
            Uniprot:F1RZG0
        Length = 257

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   156 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 212


>UNIPROTKB|A7MBD6 [details] [associations]
            symbol:HOXD4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
            differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0048863
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
            eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            OrthoDB:EOG4GTKF7 CTD:3233 OMA:EQGADYY EMBL:DAAA02004173
            EMBL:BC151499 IPI:IPI00694463 RefSeq:NP_001094557.1
            UniGene:Bt.41501 SMR:A7MBD6 Ensembl:ENSBTAT00000028606
            GeneID:513306 KEGG:bta:513306 InParanoid:A7MBD6 NextBio:20870804
            Uniprot:A7MBD6
        Length = 258

 Score = 164 (62.8 bits), Expect = 3.2e-12, P = 3.2e-12
 Identities = 34/57 (59%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK
Sbjct:   158 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK 214


>UNIPROTKB|E1BBM6 [details] [associations]
            symbol:VAX2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060041 "retina
            development in camera-type eye" evidence=IEA] [GO:0048048
            "embryonic eye morphogenesis" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IEA] [GO:0030900 "forebrain development"
            evidence=IEA] [GO:0009950 "dorsal/ventral axis specification"
            evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041
            GO:GO:0007409 GO:GO:0048048 GO:GO:0000976 GO:GO:0031490
            GO:GO:0009950 GeneTree:ENSGT00680000099870 KO:K09318 CTD:25806
            OMA:LGEADHC EMBL:DAAA02030410 EMBL:DAAA02030411 IPI:IPI00689758
            RefSeq:NP_001179242.1 UniGene:Bt.106472 Ensembl:ENSBTAT00000014023
            GeneID:539808 KEGG:bta:539808 NextBio:20878236 Uniprot:E1BBM6
        Length = 286

 Score = 166 (63.5 bits), Expect = 3.4e-12, P = 3.4e-12
 Identities = 31/59 (52%), Positives = 43/59 (72%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK
Sbjct:    98 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK 156


>UNIPROTKB|Q9UIW0 [details] [associations]
            symbol:VAX2 "Ventral anterior homeobox 2" species:9606
            "Homo sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA]
            [GO:0009950 "dorsal/ventral axis specification" evidence=IEA]
            [GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0048048
            "embryonic eye morphogenesis" evidence=IEA] [GO:0060041 "retina
            development in camera-type eye" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0030900 "forebrain development" evidence=ISS]
            [GO:0007398 "ectoderm development" evidence=TAS] [GO:0007601
            "visual perception" evidence=TAS] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 EMBL:CH471053
            GO:GO:0016055 GO:GO:0007601 GO:GO:0030900 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007409
            GO:GO:0048048 GO:GO:0000976 GO:GO:0007398 GO:GO:0031490
            GO:GO:0009950 eggNOG:NOG309408 HOGENOM:HOG000049217
            HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
            EMBL:Y17791 EMBL:BT007035 EMBL:BC006336 IPI:IPI00018903
            RefSeq:NP_036608.1 UniGene:Hs.249170 ProteinModelPortal:Q9UIW0
            SMR:Q9UIW0 STRING:Q9UIW0 PhosphoSite:Q9UIW0 DMDM:20532295
            PaxDb:Q9UIW0 PRIDE:Q9UIW0 DNASU:25806 Ensembl:ENST00000234392
            GeneID:25806 KEGG:hsa:25806 UCSC:uc002shh.3 GeneCards:GC02P071127
            HGNC:HGNC:12661 MIM:604295 neXtProt:NX_Q9UIW0 PharmGKB:PA37284
            InParanoid:Q9UIW0 OMA:LGEADHC PhylomeDB:Q9UIW0 GenomeRNAi:25806
            NextBio:47023 ArrayExpress:Q9UIW0 Bgee:Q9UIW0 CleanEx:HS_VAX2
            Genevestigator:Q9UIW0 GermOnline:ENSG00000116035 Uniprot:Q9UIW0
        Length = 290

 Score = 166 (63.5 bits), Expect = 3.6e-12, P = 3.6e-12
 Identities = 31/59 (52%), Positives = 43/59 (72%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK
Sbjct:   101 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK 159


>MGI|MGI:1346018 [details] [associations]
            symbol:Vax2 "ventral anterior homeobox containing gene 2"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IGI]
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007409
            "axonogenesis" evidence=IMP] [GO:0009950 "dorsal/ventral axis
            specification" evidence=IMP] [GO:0016055 "Wnt receptor signaling
            pathway" evidence=IEA] [GO:0030900 "forebrain development"
            evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IDA]
            [GO:0043010 "camera-type eye development" evidence=IGI] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0048048
            "embryonic eye morphogenesis" evidence=IDA;IMP] [GO:0060041 "retina
            development in camera-type eye" evidence=IDA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:1346018 GO:GO:0005634 GO:GO:0005737
            GO:GO:0016055 GO:GO:0030900 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0060041 GO:GO:0007409 GO:GO:0048048
            GO:GO:0000976 GO:GO:0031490 GO:GO:0009950 eggNOG:NOG309408
            GeneTree:ENSGT00680000099870 HOGENOM:HOG000049217
            HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
            OMA:LGEADHC EMBL:AB020498 EMBL:Y17792 EMBL:AF028715 IPI:IPI00123684
            RefSeq:NP_036042.1 UniGene:Mm.307165 ProteinModelPortal:Q9WTP9
            SMR:Q9WTP9 STRING:Q9WTP9 PhosphoSite:Q9WTP9 PRIDE:Q9WTP9
            Ensembl:ENSMUST00000037807 GeneID:24113 KEGG:mmu:24113
            InParanoid:Q9WTP9 NextBio:304143 Bgee:Q9WTP9 CleanEx:MM_VAX2
            Genevestigator:Q9WTP9 GermOnline:ENSMUSG00000034777 Uniprot:Q9WTP9
        Length = 292

 Score = 166 (63.5 bits), Expect = 3.7e-12, P = 3.7e-12
 Identities = 31/59 (52%), Positives = 43/59 (72%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK
Sbjct:   101 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK 159


>RGD|621133 [details] [associations]
            symbol:Vax2 "ventral anterior homeobox 2" species:10116 "Rattus
            norvegicus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007409 "axonogenesis" evidence=IEA;ISO] [GO:0009950
            "dorsal/ventral axis specification" evidence=IEA;ISO] [GO:0016055
            "Wnt receptor signaling pathway" evidence=IEA] [GO:0030900
            "forebrain development" evidence=IEA;ISO;ISS] [GO:0031490
            "chromatin DNA binding" evidence=IEA;ISO] [GO:0043010 "camera-type
            eye development" evidence=ISO] [GO:0048048 "embryonic eye
            morphogenesis" evidence=IEA;ISO] [GO:0060041 "retina development in
            camera-type eye" evidence=IEA;ISO] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:621133 GO:GO:0005634 GO:GO:0005737 GO:GO:0016055
            GO:GO:0030900 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0060041 GO:GO:0007409 GO:GO:0048048 GO:GO:0000976
            GO:GO:0031490 GO:GO:0009950 eggNOG:NOG309408 HOGENOM:HOG000049217
            HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
            EMBL:AF113516 IPI:IPI00204233 RefSeq:NP_072159.1 UniGene:Rn.48765
            ProteinModelPortal:Q9JLZ9 GeneID:64572 KEGG:rno:64572
            UCSC:RGD:621133 InParanoid:Q9JLZ9 NextBio:613528
            Genevestigator:Q9JLZ9 GermOnline:ENSRNOG00000013261 Uniprot:Q9JLZ9
        Length = 292

 Score = 166 (63.5 bits), Expect = 3.7e-12, P = 3.7e-12
 Identities = 31/59 (52%), Positives = 43/59 (72%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK
Sbjct:   101 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK 159


>UNIPROTKB|Q9JLZ9 [details] [associations]
            symbol:Vax2 "Ventral anterior homeobox 2" species:10116
            "Rattus norvegicus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 RGD:621133 GO:GO:0005634
            GO:GO:0005737 GO:GO:0016055 GO:GO:0030900 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007409
            GO:GO:0048048 GO:GO:0000976 GO:GO:0031490 GO:GO:0009950
            eggNOG:NOG309408 HOGENOM:HOG000049217 HOVERGEN:HBG007558 KO:K09318
            OrthoDB:EOG4QVCD6 CTD:25806 EMBL:AF113516 IPI:IPI00204233
            RefSeq:NP_072159.1 UniGene:Rn.48765 ProteinModelPortal:Q9JLZ9
            GeneID:64572 KEGG:rno:64572 UCSC:RGD:621133 InParanoid:Q9JLZ9
            NextBio:613528 Genevestigator:Q9JLZ9 GermOnline:ENSRNOG00000013261
            Uniprot:Q9JLZ9
        Length = 292

 Score = 166 (63.5 bits), Expect = 3.7e-12, P = 3.7e-12
 Identities = 31/59 (52%), Positives = 43/59 (72%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK
Sbjct:   101 RPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK 159


>UNIPROTKB|F1NFN6 [details] [associations]
            symbol:DLX5 "Homeobox protein DLX-5" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001649
            "osteoblast differentiation" evidence=IEA] [GO:0001958
            "endochondral ossification" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008283
            "cell proliferation" evidence=IEA] [GO:0030326 "embryonic limb
            morphogenesis" evidence=IEA] [GO:0030855 "epithelial cell
            differentiation" evidence=IEA] [GO:0042472 "inner ear
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048646 "anatomical structure formation involved in
            morphogenesis" evidence=IEA] [GO:0050679 "positive regulation of
            epithelial cell proliferation" evidence=IEA] [GO:0060021 "palate
            development" evidence=IEA] [GO:0060166 "olfactory pit development"
            evidence=IEA] [GO:0060325 "face morphogenesis" evidence=IEA]
            [GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0090263
            "positive regulation of canonical Wnt receptor signaling pathway"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008283 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GO:GO:0090263 GO:GO:0050679
            GeneTree:ENSGT00700000104439 EMBL:AC145963 IPI:IPI00821107
            Ensembl:ENSGALT00000014862 ArrayExpress:F1NFN6 Uniprot:F1NFN6
        Length = 77

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 36/75 (48%), Positives = 49/75 (65%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:     1 NGKPK--KVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNK 58

Query:    68 RAKIKKA--SGQKNP 80
             R+KIKK   +G+  P
Sbjct:    59 RSKIKKIMKNGEMPP 73


>UNIPROTKB|F1MJX6 [details] [associations]
            symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            EMBL:DAAA02010938 IPI:IPI00692351 UniGene:Bt.59423
            Ensembl:ENSBTAT00000001409 NextBio:20877630 Uniprot:F1MJX6
        Length = 253

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E Q+KIWFQN+R K KK
Sbjct:   149 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 205


>UNIPROTKB|H0YHX3 [details] [associations]
            symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
        Length = 140

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E Q+KIWFQN+R K KK
Sbjct:    36 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 92


>RGD|2321880 [details] [associations]
            symbol:LOC100360577 "homeobox A4-like" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:2321880 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 EMBL:AC122669 IPI:IPI00778476
            Ensembl:ENSRNOT00000058985 ArrayExpress:E9PTN3 Uniprot:E9PTN3
        Length = 189

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E Q+KIWFQN+R K KK
Sbjct:    85 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 141


>ZFIN|ZDB-GENE-050510-1 [details] [associations]
            symbol:cdx1a "caudal type homeo box transcription
            factor 1 a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA] [GO:0001756
            "somitogenesis" evidence=IGI] [GO:0048384 "retinoic acid receptor
            signaling pathway" evidence=IGI] [GO:0048793 "pronephros
            development" evidence=IGI] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IGI] [GO:0031016 "pancreas development"
            evidence=IGI] [GO:0021906 "hindbrain-spinal cord boundary
            formation" evidence=IMP] [GO:0021903 "rostrocaudal neural tube
            patterning" evidence=IGI] [GO:0009948 "anterior/posterior axis
            specification" evidence=IGI] [GO:0030097 "hemopoiesis"
            evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-050510-1 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0001756 GO:GO:0030097 GO:GO:0031016
            GO:GO:0048384 GO:GO:0000976 GO:GO:0009948 GO:GO:0048793
            HOVERGEN:HBG005302 EMBL:BC115217 EMBL:AB067733 IPI:IPI00494798
            RefSeq:NP_998001.2 UniGene:Dr.84223 SMR:Q8AXR4 GeneID:405762
            KEGG:dre:405762 CTD:405762 HOGENOM:HOG000169206 InParanoid:Q8AXR4
            NextBio:20817730 GO:GO:0021906 Uniprot:Q8AXR4
        Length = 228

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 39/88 (44%), Positives = 55/88 (62%)

Query:     9 GKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKR 68
             G   R+K+K  R  +S  Q   L+ EF  +RY+T RR+ ELA  L L+E Q+KIWFQN+R
Sbjct:   123 GGKTRTKDKY-RVVYSDVQRLELEKEFHFSRYITIRRKAELAGTLNLSERQVKIWFQNRR 181

Query:    69 AKIKKASGQKNPLALQLMAQGLYNHSTV 96
             AK +K + +K    +Q  + GL N +TV
Sbjct:   182 AKERKMN-KKRLQQVQQSSSGLANTTTV 208


>UNIPROTKB|Q9PU20 [details] [associations]
            symbol:vax2-a "Ventral anterior homeobox 2a" species:8355
            "Xenopus laevis" [GO:0030900 "forebrain development" evidence=ISS]
            [GO:0060322 "head development" evidence=IMP] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0016055 GO:GO:0030900
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060322
            HOVERGEN:HBG007558 KO:K09318 EMBL:AJ238649 RefSeq:NP_001081712.1
            UniGene:Xl.224 ProteinModelPortal:Q9PU20 GeneID:398011
            KEGG:xla:398011 CTD:398011 Xenbase:XB-GENE-492927 Uniprot:Q9PU20
        Length = 302

 Score = 166 (63.5 bits), Expect = 4.3e-12, P = 4.3e-12
 Identities = 31/59 (52%), Positives = 43/59 (72%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK
Sbjct:   104 RPKRTRTSFTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK 162


>FB|FBgn0004053 [details] [associations]
            symbol:zen "zerknullt" species:7227 "Drosophila melanogaster"
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0005634 "nucleus"
            evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0007450
            "dorsal/ventral pattern formation, imaginal disc" evidence=NAS]
            [GO:0009950 "dorsal/ventral axis specification" evidence=TAS]
            [GO:0007378 "amnioserosa formation" evidence=TAS] [GO:0010629
            "negative regulation of gene expression" evidence=IDA] [GO:0048749
            "compound eye development" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311 GO:GO:0003705
            GO:GO:0010629 EMBL:AE001572 GO:GO:0048749 GO:GO:0009950 ChiTaRS:br
            GO:GO:0007378 GeneTree:ENSGT00700000104161 EMBL:X68347
            EMBL:BT028847 PIR:A43697 RefSeq:NP_476793.1 UniGene:Dm.27227
            PDB:1KZ2 PDBsum:1KZ2 ProteinModelPortal:P09089 SMR:P09089
            DIP:DIP-18255N IntAct:P09089 MINT:MINT-1547017 STRING:P09089
            PRIDE:P09089 EnsemblMetazoa:FBtr0081670 GeneID:40828
            KEGG:dme:Dmel_CG1046 CTD:40828 FlyBase:FBgn0004053 eggNOG:NOG237021
            InParanoid:P09089 OMA:YRTRRIE OrthoDB:EOG4K3JC5 PhylomeDB:P09089
            EvolutionaryTrace:P09089 GenomeRNAi:40828 NextBio:820800
            Bgee:P09089 GermOnline:CG1046 Uniprot:P09089
        Length = 353

 Score = 168 (64.2 bits), Expect = 4.4e-12, P = 4.4e-12
 Identities = 38/78 (48%), Positives = 47/78 (60%)

Query:    12 KRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKI 71
             +R K KR RTAF+  QL  L+ EF  N YL   RR E+A  L L E Q+KIWFQN+R K 
Sbjct:    86 QRVKLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKF 145

Query:    72 KK-ASGQKNPLALQLMAQ 88
             KK   G + P +   +AQ
Sbjct:   146 KKDIQGHREPKSNAKLAQ 163


>ZFIN|ZDB-GENE-030904-8 [details] [associations]
            symbol:vax2 "ventral anterior homeobox 2"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0030900 "forebrain
            development" evidence=ISS] [GO:0016055 "Wnt receptor signaling
            pathway" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0061386 "closure of optic fissure"
            evidence=IMP] [GO:0090259 "regulation of retinal ganglion cell axon
            guidance" evidence=IMP] [GO:0060041 "retina development in
            camera-type eye" evidence=IMP] [GO:0021554 "optic nerve
            development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-030904-8 GO:GO:0005634 GO:GO:0016055 GO:GO:0030900
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0060041 GO:GO:0000976 GO:GO:0061386 eggNOG:NOG309408
            GeneTree:ENSGT00680000099870 GO:GO:0021554 HOGENOM:HOG000049217
            HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 GO:GO:0090259
            EMBL:AY183363 IPI:IPI00501587 RefSeq:NP_919390.1 UniGene:Dr.88632
            ProteinModelPortal:Q801E1 STRING:Q801E1 Ensembl:ENSDART00000081620
            GeneID:373869 KEGG:dre:373869 CTD:25806 InParanoid:Q801E1
            OMA:LSAVHRT NextBio:20813406 ArrayExpress:Q801E1 Bgee:Q801E1
            Uniprot:Q801E1
        Length = 307

 Score = 166 (63.5 bits), Expect = 4.6e-12, P = 4.6e-12
 Identities = 31/59 (52%), Positives = 43/59 (72%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             + KR RT+F+ EQL RL++EF   +Y+  R R ELA +L L+E Q+K+WFQN+R K KK
Sbjct:   102 RPKRTRTSFTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK 160


>UNIPROTKB|F1NM26 [details] [associations]
            symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
            specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0007519 "skeletal muscle tissue development" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
            development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 OMA:DHTLFGC
            EMBL:AADN02000860 EMBL:AADN02000861 EMBL:AADN02000862
            EMBL:AADN02000863 EMBL:AADN02000864 IPI:IPI00604288
            Ensembl:ENSGALT00000017555 ArrayExpress:F1NM26 Uniprot:F1NM26
        Length = 302

 Score = 165 (63.1 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 31/63 (49%), Positives = 42/63 (66%)

Query:    14 SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             SK ++ RTAF+ EQ+  L+ EF  + YLT  RR E+A  L L E Q+K+WFQN+R K K+
Sbjct:   183 SKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKR 242

Query:    74 ASG 76
               G
Sbjct:   243 VKG 245


>UNIPROTKB|E2QT43 [details] [associations]
            symbol:HOXB5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045446
            "endothelial cell differentiation" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
            GeneTree:ENSGT00700000104189 KO:K09305 OMA:APQIFPW CTD:3215
            EMBL:AAEX03006516 RefSeq:XP_003435305.1 SMR:E2QT43
            Ensembl:ENSCAFT00000026675 GeneID:100686000 KEGG:cfa:100686000
            Uniprot:E2QT43
        Length = 269

 Score = 163 (62.4 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 38/80 (47%), Positives = 50/80 (62%)

Query:     1 PRSRRIKSGKDKRSKE-KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQ 59
             P  R++    D    + KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E Q
Sbjct:   178 PWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 237

Query:    60 IKIWFQNKRAKIKKASGQKN 79
             IKIWFQN+R K KK +  K+
Sbjct:   238 IKIWFQNRRMKWKKDNKLKS 257


>UNIPROTKB|P09067 [details] [associations]
            symbol:HOXB5 "Homeobox protein Hox-B5" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0045446 "endothelial cell
            differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0009653 "anatomical structure morphogenesis"
            evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009653
            GO:GO:0048704 GO:GO:0045446 HOVERGEN:HBG016849 eggNOG:NOG236516
            HOGENOM:HOG000231178 KO:K09305 PIR:A24777 EMBL:AF287967 OMA:APQIFPW
            OrthoDB:EOG45MN66 EMBL:M92299 EMBL:AK314964 EMBL:BC117247
            EMBL:X03794 EMBL:K02572 EMBL:M86726 IPI:IPI00012514 PIR:A45578
            RefSeq:NP_002138.1 UniGene:Hs.654456 ProteinModelPortal:P09067
            SMR:P09067 IntAct:P09067 STRING:P09067 PhosphoSite:P09067
            DMDM:400000 PRIDE:P09067 Ensembl:ENST00000239151 GeneID:3215
            KEGG:hsa:3215 UCSC:uc002inr.3 CTD:3215 GeneCards:GC17M046668
            HGNC:HGNC:5116 MIM:142960 neXtProt:NX_P09067 PharmGKB:PA29392
            InParanoid:P09067 PhylomeDB:P09067 GenomeRNAi:3215 NextBio:12792
            Bgee:P09067 CleanEx:HS_HOXB5 Genevestigator:P09067
            GermOnline:ENSG00000120075 Uniprot:P09067
        Length = 269

 Score = 163 (62.4 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 38/80 (47%), Positives = 50/80 (62%)

Query:     1 PRSRRIKSGKDKRSKE-KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQ 59
             P  R++    D    + KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E Q
Sbjct:   178 PWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 237

Query:    60 IKIWFQNKRAKIKKASGQKN 79
             IKIWFQN+R K KK +  K+
Sbjct:   238 IKIWFQNRRMKWKKDNKLKS 257


>UNIPROTKB|F1RWG0 [details] [associations]
            symbol:HOXB5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0045446
            "endothelial cell differentiation" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
            GeneTree:ENSGT00700000104189 KO:K09305 OMA:APQIFPW EMBL:CU856160
            RefSeq:XP_003131598.1 ProteinModelPortal:F1RWG0 SMR:F1RWG0
            Ensembl:ENSSSCT00000019094 GeneID:100522700 KEGG:ssc:100522700
            Uniprot:F1RWG0
        Length = 269

 Score = 163 (62.4 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 38/80 (47%), Positives = 50/80 (62%)

Query:     1 PRSRRIKSGKDKRSKE-KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQ 59
             P  R++    D    + KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E Q
Sbjct:   178 PWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 237

Query:    60 IKIWFQNKRAKIKKASGQKN 79
             IKIWFQN+R K KK +  K+
Sbjct:   238 IKIWFQNRRMKWKKDNKLKS 257


>MGI|MGI:96186 [details] [associations]
            symbol:Hoxb5 "homeobox B5" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045446 "endothelial cell differentiation"
            evidence=IDA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IGI;IMP] [GO:0048706 "embryonic skeletal system
            development" evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:96186 GO:GO:0005634
            GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0045446
            GeneTree:ENSGT00700000104189 HOVERGEN:HBG016849 eggNOG:NOG236516
            HOGENOM:HOG000231178 KO:K09305 OMA:APQIFPW OrthoDB:EOG45MN66
            CTD:3215 EMBL:M26283 EMBL:AK133512 EMBL:BC103595 EMBL:BC103596
            EMBL:BC103604 EMBL:BC103607 EMBL:L36070 EMBL:X03033 IPI:IPI00132538
            PIR:A43551 PIR:B24777 RefSeq:NP_032294.2 UniGene:Mm.207
            ProteinModelPortal:P09079 SMR:P09079 STRING:P09079
            PhosphoSite:P09079 PRIDE:P09079 Ensembl:ENSMUST00000049272
            GeneID:15413 KEGG:mmu:15413 InParanoid:P09079 NextBio:288138
            Bgee:P09079 CleanEx:MM_HOXB5 Genevestigator:P09079
            GermOnline:ENSMUSG00000038700 Uniprot:P09079
        Length = 269

 Score = 163 (62.4 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 38/80 (47%), Positives = 50/80 (62%)

Query:     1 PRSRRIKSGKDKRSKE-KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQ 59
             P  R++    D    + KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E Q
Sbjct:   178 PWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 237

Query:    60 IKIWFQNKRAKIKKASGQKN 79
             IKIWFQN+R K KK +  K+
Sbjct:   238 IKIWFQNRRMKWKKDNKLKS 257


>RGD|1562292 [details] [associations]
            symbol:Hoxb5 "homeo box B5" species:10116 "Rattus norvegicus"
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045446 "endothelial cell
            differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic
            skeletal system development" evidence=ISO] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1562292
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0048704 EMBL:CH473948 GO:GO:0045446
            GeneTree:ENSGT00700000104189 KO:K09305 OMA:APQIFPW
            OrthoDB:EOG45MN66 CTD:3215 IPI:IPI00368860 RefSeq:NP_001178854.1
            UniGene:Rn.229521 SMR:D3ZMA1 Ensembl:ENSRNOT00000010724
            GeneID:497987 KEGG:rno:497987 UCSC:RGD:1562292 NextBio:698308
            Uniprot:D3ZMA1
        Length = 269

 Score = 163 (62.4 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 38/80 (47%), Positives = 50/80 (62%)

Query:     1 PRSRRIKSGKDKRSKE-KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQ 59
             P  R++    D    + KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E Q
Sbjct:   178 PWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 237

Query:    60 IKIWFQNKRAKIKKASGQKN 79
             IKIWFQN+R K KK +  K+
Sbjct:   238 IKIWFQNRRMKWKKDNKLKS 257


>UNIPROTKB|A5D7C5 [details] [associations]
            symbol:MEOX2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
            development" evidence=IEA] [GO:0060021 "palate development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
            "somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
            GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
            GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
            GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
            HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
            EMBL:DAAA02009993 EMBL:DAAA02009994 EMBL:DAAA02009995 EMBL:BC140506
            IPI:IPI00711174 RefSeq:NP_001091514.1 UniGene:Bt.63482 SMR:A5D7C5
            Ensembl:ENSBTAT00000004198 GeneID:518540 KEGG:bta:518540
            InParanoid:A5D7C5 NextBio:20872676 Uniprot:A5D7C5
        Length = 303

 Score = 165 (63.1 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 31/63 (49%), Positives = 42/63 (66%)

Query:    14 SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             SK ++ RTAF+ EQ+  L+ EF  + YLT  RR E+A  L L E Q+K+WFQN+R K K+
Sbjct:   184 SKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKR 243

Query:    74 ASG 76
               G
Sbjct:   244 VKG 246


>UNIPROTKB|E2RDU9 [details] [associations]
            symbol:MEOX2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173
            "limb development" evidence=IEA] [GO:0060021 "palate development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
            "somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
            GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
            GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
            GeneTree:ENSGT00660000095141 KO:K09322 CTD:4223 OMA:DHTLFGC
            EMBL:AAEX03009347 RefSeq:XP_539446.2 Ensembl:ENSCAFT00000003805
            GeneID:482329 KEGG:cfa:482329 NextBio:20856948 Uniprot:E2RDU9
        Length = 303

 Score = 165 (63.1 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 31/63 (49%), Positives = 42/63 (66%)

Query:    14 SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             SK ++ RTAF+ EQ+  L+ EF  + YLT  RR E+A  L L E Q+K+WFQN+R K K+
Sbjct:   184 SKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKR 243

Query:    74 ASG 76
               G
Sbjct:   244 VKG 246


>UNIPROTKB|F1SEJ3 [details] [associations]
            symbol:MEOX2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
            development" evidence=IEA] [GO:0060021 "palate development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
            "somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
            GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
            GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
            GeneTree:ENSGT00660000095141 KO:K09322 OMA:DHTLFGC EMBL:FP565218
            RefSeq:XP_003482725.1 Ensembl:ENSSSCT00000016732 GeneID:100736898
            KEGG:ssc:100736898 Uniprot:F1SEJ3
        Length = 303

 Score = 165 (63.1 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 31/63 (49%), Positives = 42/63 (66%)

Query:    14 SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             SK ++ RTAF+ EQ+  L+ EF  + YLT  RR E+A  L L E Q+K+WFQN+R K K+
Sbjct:   184 SKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKR 243

Query:    74 ASG 76
               G
Sbjct:   244 VKG 246


>MGI|MGI:103219 [details] [associations]
            symbol:Meox2 "mesenchyme homeobox 2" species:10090 "Mus
            musculus" [GO:0001525 "angiogenesis" evidence=IMP] [GO:0001757
            "somite specification" evidence=IGI] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007519 "skeletal muscle tissue development" evidence=IMP]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISO]
            [GO:0060021 "palate development" evidence=IMP] [GO:0060173 "limb
            development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:103219 GO:GO:0005737 GO:GO:0016607
            GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
            GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
            GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
            HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
            EMBL:Z16406 EMBL:AK028352 EMBL:AK031152 EMBL:AK142690 EMBL:S79168
            IPI:IPI00108444 PIR:B49122 RefSeq:NP_032610.1 UniGene:Mm.341398
            ProteinModelPortal:P32443 SMR:P32443 STRING:P32443
            PhosphoSite:P32443 PRIDE:P32443 Ensembl:ENSMUST00000041183
            GeneID:17286 KEGG:mmu:17286 UCSC:uc007nkf.1 InParanoid:P32443
            NextBio:291796 Bgee:P32443 CleanEx:MM_MEOX2 Genevestigator:P32443
            GermOnline:ENSMUSG00000036144 Uniprot:P32443
        Length = 303

 Score = 165 (63.1 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 31/63 (49%), Positives = 42/63 (66%)

Query:    14 SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             SK ++ RTAF+ EQ+  L+ EF  + YLT  RR E+A  L L E Q+K+WFQN+R K K+
Sbjct:   184 SKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKR 243

Query:    74 ASG 76
               G
Sbjct:   244 VKG 246


>RGD|3079 [details] [associations]
            symbol:Meox2 "mesenchyme homeobox 2" species:10116 "Rattus
          norvegicus" [GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001757
          "somite specification" evidence=IEA;ISO] [GO:0003700
          "sequence-specific DNA binding transcription factor activity"
          evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
          "cytoplasm" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
          development" evidence=IEA] [GO:0007519 "skeletal muscle tissue
          development" evidence=IEA;ISO] [GO:0016607 "nuclear speck"
          evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
          evidence=IEA;ISO] [GO:0060021 "palate development" evidence=IEA;ISO]
          [GO:0060173 "limb development" evidence=IEA;ISO] InterPro:IPR001356
          InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
          PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
          GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
          InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
          GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
          HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
          OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
          RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
          SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
          InParanoid:P39020 NextBio:608651 Genevestigator:P39020
          GermOnline:ENSRNOG00000006588 Uniprot:P39020
        Length = 303

 Score = 165 (63.1 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 31/63 (49%), Positives = 42/63 (66%)

Query:    14 SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             SK ++ RTAF+ EQ+  L+ EF  + YLT  RR E+A  L L E Q+K+WFQN+R K K+
Sbjct:   184 SKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKR 243

Query:    74 ASG 76
               G
Sbjct:   244 VKG 246


>UNIPROTKB|P39020 [details] [associations]
            symbol:Meox2 "Homeobox protein MOX-2" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
            GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
            GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
            HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
            OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
            RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
            SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
            InParanoid:P39020 NextBio:608651 Genevestigator:P39020
            GermOnline:ENSRNOG00000006588 Uniprot:P39020
        Length = 303

 Score = 165 (63.1 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 31/63 (49%), Positives = 42/63 (66%)

Query:    14 SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             SK ++ RTAF+ EQ+  L+ EF  + YLT  RR E+A  L L E Q+K+WFQN+R K K+
Sbjct:   184 SKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKR 243

Query:    74 ASG 76
               G
Sbjct:   244 VKG 246


>UNIPROTKB|E1BQ67 [details] [associations]
            symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0045446 "endothelial cell
            differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104189 EMBL:AADN02070205 EMBL:AADN02070206
            IPI:IPI00821744 Ensembl:ENSGALT00000018008 ArrayExpress:E1BQ67
            Uniprot:E1BQ67
        Length = 258

 Score = 162 (62.1 bits), Expect = 5.7e-12, P = 5.7e-12
 Identities = 39/76 (51%), Positives = 49/76 (64%)

Query:     4 RRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIW 63
             RR  +G D     KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E QIKIW
Sbjct:   182 RRYMTGPDG----KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIW 237

Query:    64 FQNKRAKIKKASGQKN 79
             FQN+R K KK +  K+
Sbjct:   238 FQNRRMKWKKDNKLKS 253


>UNIPROTKB|P50222 [details] [associations]
            symbol:MEOX2 "Homeobox protein MOX-2" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0001525 "angiogenesis"
            evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
            [GO:0007519 "skeletal muscle tissue development" evidence=IEA]
            [GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
            development" evidence=IEA] [GO:0016607 "nuclear speck"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007275 "multicellular
            organismal development" evidence=TAS] [GO:0008015 "blood
            circulation" evidence=TAS] [GO:0043565 "sequence-specific DNA
            binding" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0008015
            GO:GO:0016607 GO:GO:0043565 GO:GO:0003700 GO:GO:0001525
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0060021 GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519
            GO:GO:0001757 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
            EMBL:X82629 EMBL:L36328 EMBL:AC005550 EMBL:AC004452 EMBL:BC017021
            IPI:IPI00030729 PIR:A55641 PIR:A56837 RefSeq:NP_005915.2
            UniGene:Hs.170355 ProteinModelPortal:P50222 SMR:P50222
            IntAct:P50222 MINT:MINT-202865 STRING:P50222 PhosphoSite:P50222
            DMDM:93141286 PRIDE:P50222 DNASU:4223 Ensembl:ENST00000262041
            GeneID:4223 KEGG:hsa:4223 UCSC:uc003stc.3 CTD:4223
            GeneCards:GC07M015617 H-InvDB:HIX0006493 HGNC:HGNC:7014 MIM:600535
            neXtProt:NX_P50222 PharmGKB:PA30748 InParanoid:P50222 OMA:DHTLFGC
            OrthoDB:EOG4PZJ7H PhylomeDB:P50222 GenomeRNAi:4223 NextBio:16667
            ArrayExpress:P50222 Bgee:P50222 CleanEx:HS_MEOX2
            Genevestigator:P50222 GermOnline:ENSG00000106511 Uniprot:P50222
        Length = 304

 Score = 165 (63.1 bits), Expect = 5.8e-12, P = 5.8e-12
 Identities = 31/63 (49%), Positives = 42/63 (66%)

Query:    14 SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             SK ++ RTAF+ EQ+  L+ EF  + YLT  RR E+A  L L E Q+K+WFQN+R K K+
Sbjct:   185 SKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKR 244

Query:    74 ASG 76
               G
Sbjct:   245 VKG 247


>MGI|MGI:95842 [details] [associations]
            symbol:Gsx1 "GS homeobox 1" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IC] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0021527 "spinal cord association neuron differentiation"
            evidence=IGI] [GO:0021854 "hypothalamus development" evidence=IMP]
            [GO:0021984 "adenohypophysis development" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO;IMP] [GO:0048663 "neuron fate commitment"
            evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:95842 GO:GO:0005634 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021527
            GO:GO:0021984 GO:GO:0048663 GO:GO:0021854 CTD:219409
            eggNOG:NOG264927 HOGENOM:HOG000010106 HOVERGEN:HBG003555 KO:K09310
            OMA:HNCKCSS OrthoDB:EOG4GTKDV EMBL:U21224 IPI:IPI00133256
            PIR:S63604 RefSeq:NP_032204.1 UniGene:Mm.4797
            ProteinModelPortal:P31315 SMR:P31315 STRING:P31315 PRIDE:P31315
            Ensembl:ENSMUST00000065382 GeneID:14842 KEGG:mmu:14842
            GeneTree:ENSGT00700000104161 InParanoid:P31315 NextBio:287067
            Bgee:P31315 CleanEx:MM_GSX1 Genevestigator:P31315
            GermOnline:ENSMUSG00000053129 Uniprot:P31315
        Length = 261

 Score = 162 (62.1 bits), Expect = 6.2e-12, P = 6.2e-12
 Identities = 34/74 (45%), Positives = 44/74 (59%)

Query:     6 IKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQ 65
             + S  ++    KR RTAF+  QL  L+ EF  N YL+  RR E+A  L L+E Q+KIWFQ
Sbjct:   136 VDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQ 195

Query:    66 NKRAKIKKASGQKN 79
             N+R K KK     N
Sbjct:   196 NRRVKHKKEGKGSN 209


>UNIPROTKB|G3V634 [details] [associations]
            symbol:Gsx1 "Protein Gsx1" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0021527 "spinal cord association neuron
            differentiation" evidence=IEA] [GO:0021854 "hypothalamus
            development" evidence=IEA] [GO:0021984 "adenohypophysis
            development" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0048663 "neuron fate commitment" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            RGD:1310020 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:CH474012 CTD:219409 KO:K09310 OMA:HNCKCSS
            GeneTree:ENSGT00700000104161 RefSeq:NP_001178592.1
            UniGene:Rn.228201 Ensembl:ENSRNOT00000001260 GeneID:288457
            KEGG:rno:288457 NextBio:628114 Uniprot:G3V634
        Length = 261

 Score = 162 (62.1 bits), Expect = 6.2e-12, P = 6.2e-12
 Identities = 34/74 (45%), Positives = 44/74 (59%)

Query:     6 IKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQ 65
             + S  ++    KR RTAF+  QL  L+ EF  N YL+  RR E+A  L L+E Q+KIWFQ
Sbjct:   136 VDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQ 195

Query:    66 NKRAKIKKASGQKN 79
             N+R K KK     N
Sbjct:   196 NRRVKHKKEGKGSN 209


>ZFIN|ZDB-GENE-980526-70 [details] [associations]
            symbol:hoxb5a "homeo box B5a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007420 "brain development" evidence=IMP] [GO:0001708 "cell
            fate specification" evidence=IMP] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-70 GO:GO:0005634
            GO:GO:0001708 GO:GO:0007420 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104189 HOVERGEN:HBG016849
            eggNOG:NOG236516 HOGENOM:HOG000231178 KO:K09305 EMBL:AL645782
            EMBL:X12802 EMBL:X68248 EMBL:BC071493 EMBL:DQ060540 EMBL:X07381
            IPI:IPI00493376 PIR:S03671 RefSeq:NP_571176.2 UniGene:Dr.35792
            ProteinModelPortal:P09014 SMR:P09014 Ensembl:ENSDART00000025449
            GeneID:30317 KEGG:dre:30317 CTD:30317 InParanoid:P09014 OMA:APQIFPW
            OrthoDB:EOG45MN66 NextBio:20806756 Bgee:P09014 Uniprot:P09014
        Length = 275

 Score = 163 (62.4 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 38/80 (47%), Positives = 50/80 (62%)

Query:     1 PRSRRIKSGKDKRSKE-KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQ 59
             P  R++    D    + KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E Q
Sbjct:   184 PWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 243

Query:    60 IKIWFQNKRAKIKKASGQKN 79
             IKIWFQN+R K KK +  K+
Sbjct:   244 IKIWFQNRRMKWKKDNKLKS 263


>ZFIN|ZDB-GENE-000822-1 [details] [associations]
            symbol:hoxc6b "homeo box C6b" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000822-1 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 EMBL:CABZ01085067 IPI:IPI00484929
            Ensembl:ENSDART00000067698 OMA:EIANTLC ArrayExpress:F1RAL1
            Bgee:F1RAL1 Uniprot:F1RAL1
        Length = 228

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 37/68 (54%), Positives = 43/68 (63%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SG    S  +R R  +S  Q   L+ EF  NRYLT RRR E+AN L L+E QIKIWFQN+
Sbjct:   128 SGVGYGSDRRRGRQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLSERQIKIWFQNR 187

Query:    68 RAKIKKAS 75
             R K KK S
Sbjct:   188 RMKWKKES 195


>ZFIN|ZDB-GENE-031007-7 [details] [associations]
            symbol:emx1 "empty spiracles homeobox 1" species:7955
            "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-031007-7 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 HSSP:P06602 KO:K09317 EMBL:AF534523 IPI:IPI00496363
            RefSeq:NP_937787.1 UniGene:Dr.82768 ProteinModelPortal:Q804S6
            STRING:Q804S6 Ensembl:ENSDART00000057810 GeneID:378964
            KEGG:dre:378964 CTD:2016 eggNOG:NOG266219
            GeneTree:ENSGT00680000099625 HOGENOM:HOG000247032
            HOVERGEN:HBG005024 InParanoid:Q804S6 OMA:NHHINRW OrthoDB:EOG44QT1V
            NextBio:20813907 ArrayExpress:Q804S6 Bgee:Q804S6 Uniprot:Q804S6
        Length = 231

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 31/59 (52%), Positives = 41/59 (69%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             K KR RTAFS  QL RL+  F +N Y+    R++LAN L L+E Q+K+WFQN+R K K+
Sbjct:   132 KPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLANSLSLSETQVKVWFQNRRTKYKR 190


>UNIPROTKB|E2RI77 [details] [associations]
            symbol:GSX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048663
            "neuron fate commitment" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0021984 "adenohypophysis development"
            evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
            [GO:0021527 "spinal cord association neuron differentiation"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021527 GO:GO:0021984
            GO:GO:0048663 GO:GO:0021854 OMA:HNCKCSS
            GeneTree:ENSGT00700000104161 EMBL:AAEX03014242
            Ensembl:ENSCAFT00000010870 Uniprot:E2RI77
        Length = 263

 Score = 162 (62.1 bits), Expect = 6.5e-12, P = 6.5e-12
 Identities = 34/74 (45%), Positives = 44/74 (59%)

Query:     6 IKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQ 65
             + S  ++    KR RTAF+  QL  L+ EF  N YL+  RR E+A  L L+E Q+KIWFQ
Sbjct:   137 VDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQ 196

Query:    66 NKRAKIKKASGQKN 79
             N+R K KK     N
Sbjct:   197 NRRVKHKKEGKGSN 210


>UNIPROTKB|F1RL72 [details] [associations]
            symbol:LOC100626834 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR006820 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
            GO:GO:0000976 EMBL:FP102406 RefSeq:XP_003354410.1
            Ensembl:ENSSSCT00000015792 GeneID:100626834 KEGG:ssc:100626834
            OMA:RRTPYEM Uniprot:F1RL72
        Length = 263

 Score = 162 (62.1 bits), Expect = 6.5e-12, P = 6.5e-12
 Identities = 35/73 (47%), Positives = 49/73 (67%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SGK  R+K+K  R  ++  Q   L+ EF  +RY+T RR+ ELA  LGL E Q+KIWFQN+
Sbjct:   146 SGKT-RTKDKY-RVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNR 203

Query:    68 RAKIKKASGQKNP 80
             RAK +K + ++ P
Sbjct:   204 RAKERKVNKKQQP 216


>UNIPROTKB|I3L684 [details] [associations]
            symbol:LOC100626275 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR006820 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
            GO:GO:0000976 KO:K09312 OMA:YSHVEPG EMBL:CU914366
            RefSeq:XP_003354406.1 Ensembl:ENSSSCT00000031753 GeneID:100626275
            KEGG:ssc:100626275 Uniprot:I3L684
        Length = 263

 Score = 162 (62.1 bits), Expect = 6.5e-12, P = 6.5e-12
 Identities = 35/73 (47%), Positives = 49/73 (67%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SGK  R+K+K  R  ++  Q   L+ EF  +RY+T RR+ ELA  LGL E Q+KIWFQN+
Sbjct:   146 SGKT-RTKDKY-RVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNR 203

Query:    68 RAKIKKASGQKNP 80
             RAK +K + ++ P
Sbjct:   204 RAKERKVNKKQQP 216


>ZFIN|ZDB-GENE-000823-6 [details] [associations]
            symbol:hoxb5b "homeo box B5b" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0010002 "cardioblast differentiation" evidence=IMP] [GO:0007420
            "brain development" evidence=IMP] [GO:0001708 "cell fate
            specification" evidence=IMP] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-6 GO:GO:0005634
            GO:GO:0001708 GO:GO:0007420 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0010002 GeneTree:ENSGT00700000104189
            HOVERGEN:HBG016849 eggNOG:NOG236516 HOGENOM:HOG000231178
            EMBL:AL645798 OrthoDB:EOG45MN66 EMBL:AF071253 EMBL:BC078285
            EMBL:DQ060547 EMBL:X12803 EMBL:Y14526 IPI:IPI00489481
            RefSeq:NP_571612.2 UniGene:Dr.75783 ProteinModelPortal:P09013
            SMR:P09013 Ensembl:ENSDART00000076161 GeneID:58052 KEGG:dre:58052
            CTD:58052 InParanoid:P09013 NextBio:20892316 Bgee:P09013
            Uniprot:P09013
        Length = 276

 Score = 163 (62.4 bits), Expect = 6.5e-12, P = 6.5e-12
 Identities = 38/80 (47%), Positives = 50/80 (62%)

Query:     1 PRSRRIKSGKDKRSKE-KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQ 59
             P  R++    D    + KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E Q
Sbjct:   185 PWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQ 244

Query:    60 IKIWFQNKRAKIKKASGQKN 79
             IKIWFQN+R K KK +  K+
Sbjct:   245 IKIWFQNRRMKWKKDNKLKS 264


>UNIPROTKB|Q9H4S2 [details] [associations]
            symbol:GSX1 "GS homeobox 1" species:9606 "Homo sapiens"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0021527 "spinal cord association neuron
            differentiation" evidence=IEA] [GO:0021854 "hypothalamus
            development" evidence=IEA] [GO:0021984 "adenohypophysis
            development" evidence=IEA] [GO:0048663 "neuron fate commitment"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021527 GO:GO:0021984
            GO:GO:0048663 GO:GO:0021854 EMBL:AB044157 EMBL:AB044158
            EMBL:AL390738 IPI:IPI00028199 RefSeq:NP_663632.1 UniGene:Hs.351785
            ProteinModelPortal:Q9H4S2 SMR:Q9H4S2 STRING:Q9H4S2 DMDM:27923786
            PRIDE:Q9H4S2 DNASU:219409 Ensembl:ENST00000302945 GeneID:219409
            KEGG:hsa:219409 UCSC:uc001urr.1 CTD:219409 GeneCards:GC13P028366
            HGNC:HGNC:20374 HPA:HPA047096 neXtProt:NX_Q9H4S2
            PharmGKB:PA162390373 eggNOG:NOG264927 HOGENOM:HOG000010106
            HOVERGEN:HBG003555 InParanoid:Q9H4S2 KO:K09310 OMA:HNCKCSS
            OrthoDB:EOG4GTKDV GenomeRNAi:219409 NextBio:90587 Bgee:Q9H4S2
            CleanEx:HS_GSX1 Genevestigator:Q9H4S2 GermOnline:ENSG00000169840
            Uniprot:Q9H4S2
        Length = 264

 Score = 162 (62.1 bits), Expect = 6.6e-12, P = 6.6e-12
 Identities = 34/74 (45%), Positives = 44/74 (59%)

Query:     6 IKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQ 65
             + S  ++    KR RTAF+  QL  L+ EF  N YL+  RR E+A  L L+E Q+KIWFQ
Sbjct:   137 VDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQ 196

Query:    66 NKRAKIKKASGQKN 79
             N+R K KK     N
Sbjct:   197 NRRVKHKKEGKGSN 210


>UNIPROTKB|E1BZJ6 [details] [associations]
            symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0045446 "endothelial cell differentiation"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104189 EMBL:AADN02070205 EMBL:AADN02070206
            IPI:IPI00588353 Ensembl:ENSGALT00000021590 ArrayExpress:E1BZJ6
            Uniprot:E1BZJ6
        Length = 265

 Score = 162 (62.1 bits), Expect = 6.8e-12, P = 6.8e-12
 Identities = 39/76 (51%), Positives = 49/76 (64%)

Query:     4 RRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIW 63
             RR  +G D     KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E QIKIW
Sbjct:   182 RRYMTGPDG----KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIW 237

Query:    64 FQNKRAKIKKASGQKN 79
             FQN+R K KK +  K+
Sbjct:   238 FQNRRMKWKKDNKLKS 253


>UNIPROTKB|F1RSW3 [details] [associations]
            symbol:GSX1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048663 "neuron
            fate commitment" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021854
            "hypothalamus development" evidence=IEA] [GO:0021527 "spinal cord
            association neuron differentiation" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0021527 GO:GO:0021984 GO:GO:0048663
            GO:GO:0021854 OMA:HNCKCSS GeneTree:ENSGT00700000104161
            EMBL:CU633812 Ensembl:ENSSSCT00000010201 Uniprot:F1RSW3
        Length = 265

 Score = 162 (62.1 bits), Expect = 6.8e-12, P = 6.8e-12
 Identities = 34/74 (45%), Positives = 44/74 (59%)

Query:     6 IKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQ 65
             + S  ++    KR RTAF+  QL  L+ EF  N YL+  RR E+A  L L+E Q+KIWFQ
Sbjct:   135 VDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQ 194

Query:    66 NKRAKIKKASGQKN 79
             N+R K KK     N
Sbjct:   195 NRRVKHKKEGKGSN 208


>ZFIN|ZDB-GENE-990415-49 [details] [associations]
            symbol:dlx5a "distal-less homeobox gene 5a"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0051216 "cartilage
            development" evidence=IGI] [GO:0007275 "multicellular organismal
            development" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-990415-49 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0051216 GO:GO:0000976 eggNOG:NOG263092 HOVERGEN:HBG005493
            HOGENOM:HOG000231940 InterPro:IPR022135 Pfam:PF12413 KO:K09315
            EMBL:U03876 IPI:IPI00491132 PIR:I50112 RefSeq:NP_571381.1
            UniGene:Dr.429 ProteinModelPortal:P50576 SMR:P50576 STRING:P50576
            GeneID:30569 KEGG:dre:30569 CTD:30569 InParanoid:P50576
            NextBio:20806940 ArrayExpress:P50576 Uniprot:P50576
        Length = 283

 Score = 163 (62.4 bits), Expect = 7.3e-12, P = 7.3e-12
 Identities = 34/69 (49%), Positives = 46/69 (66%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             R+ +GK K  K ++PRT +S  QL+ L+  F   +YL    R ELA  LGL + Q+KIWF
Sbjct:   128 RMVNGKPK--KVRKPRTIYSSFQLAALQRRFQNTQYLALPERAELAASLGLTQTQVKIWF 185

Query:    65 QNKRAKIKK 73
             QNKR+K+KK
Sbjct:   186 QNKRSKLKK 194


>MGI|MGI:96176 [details] [associations]
            symbol:Hoxa4 "homeobox A4" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=TAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IDA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:96176 GO:GO:0005634
            GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
            KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849 CTD:3201
            eggNOG:NOG257177 OrthoDB:EOG4GTKF7 EMBL:S70444 EMBL:S67058
            EMBL:AK076098 EMBL:X66861 EMBL:X13538 EMBL:X17346 EMBL:M27432
            EMBL:M13813 IPI:IPI00128156 PIR:A43556 RefSeq:NP_032291.1
            UniGene:Mm.439647 ProteinModelPortal:P06798 SMR:P06798
            STRING:P06798 PhosphoSite:P06798 PRIDE:P06798
            Ensembl:ENSMUST00000101395 GeneID:15401 KEGG:mmu:15401
            UCSC:uc009byf.1 InParanoid:P06798 NextBio:288098 Bgee:P06798
            CleanEx:MM_HOXA4 Genevestigator:P06798
            GermOnline:ENSMUSG00000000942 Uniprot:P06798
        Length = 285

 Score = 163 (62.4 bits), Expect = 7.6e-12, P = 7.6e-12
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E Q+KIWFQN+R K KK
Sbjct:   181 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 237


>UNIPROTKB|E9PT77 [details] [associations]
            symbol:LOC100360577 "Protein LOC100360577" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:2321880
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0048704 KO:K09304 OMA:PPGKPQT
            UniGene:Rn.224463 EMBL:AC122669 IPI:IPI00382378
            RefSeq:XP_002729358.1 RefSeq:XP_003749796.1
            Ensembl:ENSRNOT00000038775 GeneID:100360577 GeneID:100912525
            KEGG:rno:100360577 KEGG:rno:100912525 ArrayExpress:E9PT77
            Uniprot:E9PT77
        Length = 285

 Score = 163 (62.4 bits), Expect = 7.6e-12, P = 7.6e-12
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E Q+KIWFQN+R K KK
Sbjct:   181 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 237


>UNIPROTKB|F1NCZ0 [details] [associations]
            symbol:DLX6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030326
            "embryonic limb morphogenesis" evidence=IEA] [GO:0030855
            "epithelial cell differentiation" evidence=IEA] [GO:0042472 "inner
            ear morphogenesis" evidence=IEA] [GO:0048646 "anatomical structure
            formation involved in morphogenesis" evidence=IEA] [GO:0050679
            "positive regulation of epithelial cell proliferation"
            evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
            [GO:0060322 "head development" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GO:GO:0050679 GeneTree:ENSGT00700000104129 EMBL:AC145963
            IPI:IPI00837492 Ensembl:ENSGALT00000038005 ArrayExpress:F1NCZ0
            Uniprot:F1NCZ0
        Length = 77

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 36/74 (48%), Positives = 45/74 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:     1 NGKGK--KIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 58

Query:    68 RAKIKKASGQ-KNP 80
             R+K KK   Q  NP
Sbjct:    59 RSKFKKLLKQGSNP 72


>UNIPROTKB|F1NMG1 [details] [associations]
            symbol:F1NMG1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 IPI:IPI00598309 OMA:PEQQYKS
            GeneTree:ENSGT00700000104332 EMBL:AADN02000982 EMBL:AADN02000983
            EMBL:AADN02071374 Ensembl:ENSGALT00000018011 Uniprot:F1NMG1
        Length = 228

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 39/81 (48%), Positives = 51/81 (62%)

Query:     1 PRSRRIKSGKDKRS--KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEA 58
             P  +R+ S  D     + KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E 
Sbjct:   136 PWMQRMNSCADNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSER 195

Query:    59 QIKIWFQNKRAKIKKASGQKN 79
             QIKIWFQN+R K KK +  K+
Sbjct:   196 QIKIWFQNRRMKWKKDNKLKS 216


>UNIPROTKB|F1MU40 [details] [associations]
            symbol:MNX1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00660000095141 EMBL:DAAA02012151 IPI:IPI00695827
            Ensembl:ENSBTAT00000006046 OMA:NGASAHT Uniprot:F1MU40
        Length = 192

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 33/74 (44%), Positives = 47/74 (63%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             K +RPRTAF+ +QL  L+ +F  N+YL+  +R E+A  L L E Q+KIWFQN+R K K++
Sbjct:    28 KSRRPRTAFTKKQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRS 87

Query:    75 SGQKNPLALQLMAQ 88
                K   A +   Q
Sbjct:    88 KKAKEQAAQEAEKQ 101


>UNIPROTKB|F1MUL4 [details] [associations]
            symbol:DLX6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060322 "head
            development" evidence=IEA] [GO:0060021 "palate development"
            evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
            proliferation" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
            evidence=IEA] [GO:0030855 "epithelial cell differentiation"
            evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0030326 GO:GO:0060021
            GO:GO:0000976 GO:GO:0050679 GO:GO:0030855 GO:GO:0060322
            GeneTree:ENSGT00700000104129 OMA:SPYLPSY EMBL:DAAA02009825
            EMBL:DAAA02009826 IPI:IPI00687358 Ensembl:ENSBTAT00000028605
            Uniprot:F1MUL4
        Length = 241

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 36/74 (48%), Positives = 45/74 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:   109 NGKGK--KIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 166

Query:    68 RAKIKKASGQ-KNP 80
             R+K KK   Q  NP
Sbjct:   167 RSKFKKLLKQGSNP 180


>UNIPROTKB|J9NYN6 [details] [associations]
            symbol:HOXD1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104161 OMA:GDGAFVS EMBL:AAEX03017793
            Ensembl:ENSCAFT00000048782 Uniprot:J9NYN6
        Length = 248

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 32/54 (59%), Positives = 40/54 (74%)

Query:    20 RTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             RT FS +QL+ L+ EF  N+YLT  RR E+AN L LN+ Q+KIWFQN+R K KK
Sbjct:   153 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKK 206


>UNIPROTKB|G3V471 [details] [associations]
            symbol:DLX6 "Homeobox protein DLX-6" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 EMBL:AC004774 HGNC:HGNC:2919
            ProteinModelPortal:G3V471 SMR:G3V471 Ensembl:ENST00000555308
            ArrayExpress:G3V471 Bgee:G3V471 Uniprot:G3V471
        Length = 165

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 36/74 (48%), Positives = 45/74 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:    33 NGKGK--KIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 90

Query:    68 RAKIKKASGQ-KNP 80
             R+K KK   Q  NP
Sbjct:    91 RSKFKKLLKQGSNP 104


>UNIPROTKB|P56179 [details] [associations]
            symbol:DLX6 "Homeobox protein DLX-6" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001501
            "skeletal system development" evidence=TAS] [GO:0007399 "nervous
            system development" evidence=TAS] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0007399 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0042472 GO:GO:0030326 GO:GO:0001501 EMBL:CH236949
            GO:GO:0060021 GO:GO:0000976 GO:GO:0050679 GO:GO:0030855
            GO:GO:0060322 HOGENOM:HOG000231941 HOVERGEN:HBG005493 KO:K09314
            eggNOG:NOG289877 EMBL:AC004774 OrthoDB:EOG4QJRP4 EMBL:BC069363
            EMBL:BC103688 EMBL:BC103689 EMBL:BC103690 EMBL:BC109381
            EMBL:AK094086 IPI:IPI00942734 IPI:IPI00980746 PIR:D53495
            RefSeq:NP_005213.3 UniGene:Hs.249196 ProteinModelPortal:P56179
            SMR:P56179 IntAct:P56179 STRING:P56179 PhosphoSite:P56179
            DMDM:12644330 PaxDb:P56179 PRIDE:P56179 Ensembl:ENST00000007660
            GeneID:1750 KEGG:hsa:1750 UCSC:uc022ahu.1 CTD:1750
            GeneCards:GC07P096634 H-InvDB:HIX0006871 HGNC:HGNC:2919
            HPA:HPA030608 MIM:600030 neXtProt:NX_P56179 PharmGKB:PA27374
            InParanoid:P56179 PhylomeDB:P56179 GenomeRNAi:1750 NextBio:7101
            ArrayExpress:P56179 Bgee:P56179 CleanEx:HS_DLX6
            Genevestigator:P56179 GermOnline:ENSG00000006377 Uniprot:P56179
        Length = 175

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 36/74 (48%), Positives = 45/74 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:    43 NGKGK--KIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 100

Query:    68 RAKIKKASGQ-KNP 80
             R+K KK   Q  NP
Sbjct:   101 RSKFKKLLKQGSNP 114


>MGI|MGI:101927 [details] [associations]
            symbol:Dlx6 "distal-less homeobox 6" species:10090 "Mus
            musculus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0030326 "embryonic limb
            morphogenesis" evidence=IGI] [GO:0030855 "epithelial cell
            differentiation" evidence=IGI] [GO:0042472 "inner ear
            morphogenesis" evidence=IGI] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0048646 "anatomical structure formation
            involved in morphogenesis" evidence=IGI] [GO:0050679 "positive
            regulation of epithelial cell proliferation" evidence=IGI]
            [GO:0060021 "palate development" evidence=IGI] [GO:0060322 "head
            development" evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:101927
            GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0030326
            GO:GO:0060021 GO:GO:0000976 GO:GO:0050679 GO:GO:0030855
            GO:GO:0060322 GeneTree:ENSGT00700000104129 HOGENOM:HOG000231941
            HOVERGEN:HBG005493 KO:K09314 eggNOG:NOG289877 OMA:SPYLPSY
            OrthoDB:EOG4QJRP4 CTD:1750 EMBL:EF535989 EMBL:AC122240
            EMBL:BC114342 EMBL:AF022078 EMBL:U67841 IPI:IPI00661823
            IPI:IPI00970646 RefSeq:NP_034187.1 UniGene:Mm.439763
            ProteinModelPortal:P70397 SMR:P70397 STRING:P70397 PRIDE:P70397
            DNASU:13396 Ensembl:ENSMUST00000031768 Ensembl:ENSMUST00000160937
            Ensembl:ENSMUST00000171311 GeneID:13396 KEGG:mmu:13396
            InParanoid:A5HKN2 NextBio:283778 Bgee:P70397 CleanEx:MM_DLX6
            Genevestigator:P70397 GermOnline:ENSMUSG00000029754 Uniprot:P70397
        Length = 175

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 36/74 (48%), Positives = 45/74 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:    43 NGKGK--KIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 100

Query:    68 RAKIKKASGQ-KNP 80
             R+K KK   Q  NP
Sbjct:   101 RSKFKKLLKQGSNP 114


>WB|WBGene00003102 [details] [associations]
            symbol:mab-5 species:6239 "Caenorhabditis elegans"
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0042659 "regulation of cell fate specification" evidence=IMP]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI;IMP] [GO:0051179 "localization" evidence=IMP]
            [GO:0050679 "positive regulation of epithelial cell proliferation"
            evidence=IMP] [GO:0045138 "tail tip morphogenesis"
            evidence=IGI;IMP] [GO:0030334 "regulation of cell migration"
            evidence=IMP] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 KO:K09311 GO:GO:0000122
            GO:GO:0030334 GO:GO:0045138 eggNOG:NOG238660 GO:GO:0050679
            GO:GO:0042659 GO:GO:0051179 EMBL:FO080429
            GeneTree:ENSGT00700000104189 EMBL:M22751 EMBL:AF277990 PIR:S44615
            RefSeq:NP_498695.1 UniGene:Cel.18387 ProteinModelPortal:P10038
            SMR:P10038 IntAct:P10038 MINT:MINT-1123728 STRING:P10038
            EnsemblMetazoa:C08C3.3 GeneID:176091 KEGG:cel:CELE_C08C3.3
            UCSC:C08C3.3 CTD:176091 WormBase:C08C3.3 InParanoid:P10038
            OMA:TSANFGE NextBio:891072 Uniprot:P10038
        Length = 200

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 34/73 (46%), Positives = 46/73 (63%)

Query:     6 IKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQ 65
             +K G  K  + KR R  +S  Q   L+ EF  ++YLT +RRQE++  L L E Q+KIWFQ
Sbjct:   107 MKMGGAKGGESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQ 166

Query:    66 NKRAKIKK-ASGQ 77
             N+R K KK A G+
Sbjct:   167 NRRMKHKKEAKGE 179


>WB|WBGene00045215 [details] [associations]
            symbol:ceh-63 species:6239 "Caenorhabditis elegans"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00680000099870 EMBL:FO080254 RefSeq:NP_001123094.1
            UniGene:Cel.37684 ProteinModelPortal:A3FPJ2 SMR:A3FPJ2
            EnsemblMetazoa:C02F12.10 GeneID:6418830 KEGG:cel:CELE_C02F12.10
            UCSC:C02F12.10 CTD:6418830 WormBase:C02F12.10 eggNOG:NOG310362
            HOGENOM:HOG000246442 InParanoid:A3FPJ2 OMA:ELTECQV NextBio:20901882
            Uniprot:A3FPJ2
        Length = 152

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 34/86 (39%), Positives = 54/86 (62%)

Query:     3 SRRIKSGKDKRSKEKRP--RTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             S++IK+ K    +  RP  RT F+ EQ++ L++EF +N Y+ + RR ELA  + L E Q+
Sbjct:    26 SQQIKNIKPPPKRSNRPTKRTTFTSEQVTLLELEFAKNEYICKDRRGELAQTIELTECQV 85

Query:    61 KIWFQNKRAKIKKASGQKNPLALQLM 86
             K WFQN+R K ++ +   +PL   +M
Sbjct:    86 KTWFQNRRTKKRRCT---SPLRKSMM 108


>ZFIN|ZDB-GENE-000823-4 [details] [associations]
            symbol:hoxa4a "homeo box A4a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-000823-4 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            EMBL:CR382300 EMBL:AF071246 EMBL:BC122457 EMBL:DQ060533 EMBL:M76382
            EMBL:Y13947 IPI:IPI00487552 PIR:S34415 RefSeq:NP_571610.1
            UniGene:Dr.159437 ProteinModelPortal:Q9PWL5 SMR:Q9PWL5
            Ensembl:ENSDART00000080466 GeneID:58050 KEGG:dre:58050 CTD:58050
            eggNOG:NOG317510 HOGENOM:HOG000231179 HOVERGEN:HBG016849
            InParanoid:Q9PWL5 OMA:PGDYYER OrthoDB:EOG4S1T87 NextBio:20892314
            Bgee:Q9PWL5 Uniprot:Q9PWL5
        Length = 245

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 32/57 (56%), Positives = 42/57 (73%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q   L+ EF  NRYLT RRR E+A+ + L+E Q+KIWFQN+R K KK
Sbjct:   148 KRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWKK 204


>ZFIN|ZDB-GENE-041001-114 [details] [associations]
            symbol:gsx2 "GS homeobox 2" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-041001-114
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09310
            GeneTree:ENSGT00700000104161 CTD:170825 OMA:AFCVCPL EMBL:BX276097
            EMBL:BC115063 IPI:IPI00497940 RefSeq:NP_001020683.1
            UniGene:Dr.93529 SMR:Q1RMA3 Ensembl:ENSDART00000063601
            GeneID:561076 KEGG:dre:561076 NextBio:20883747 Uniprot:Q1RMA3
        Length = 242

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 35/78 (44%), Positives = 46/78 (58%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK-AS 75
             KR RTAF+  QL  L+ EF+ N YL+  RR E+A  L L+E Q+KIWFQN+R K KK   
Sbjct:   141 KRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGK 200

Query:    76 GQKNPLALQLMAQGLYNH 93
             G +          G ++H
Sbjct:   201 GTQRSAHAGCKCSGSHSH 218


>UNIPROTKB|F1NH10 [details] [associations]
            symbol:HOXB3 "Homeobox protein Hox-B3" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000979 "RNA polymerase
            II core promoter sequence-specific DNA binding" evidence=IEA]
            [GO:0001525 "angiogenesis" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0021546 "rhombomere development" evidence=IEA] [GO:0021615
            "glossopharyngeal nerve morphogenesis" evidence=IEA] [GO:0030878
            "thyroid gland development" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0050767
            "regulation of neurogenesis" evidence=IEA] [GO:0051216 "cartilage
            development" evidence=IEA] [GO:0060216 "definitive hemopoiesis"
            evidence=IEA] [GO:0060324 "face development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000979
            GeneTree:ENSGT00700000104189 InterPro:IPR025281 Pfam:PF13293
            OMA:ATYYDNT IPI:IPI00594134 EMBL:AADN02027051
            Ensembl:ENSGALT00000021935 Uniprot:F1NH10
        Length = 377

 Score = 166 (63.5 bits), Expect = 8.6e-12, P = 8.6e-12
 Identities = 36/65 (55%), Positives = 42/65 (64%)

Query:    14 SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             S  KR RTA++  QL  L+ EF  NRYL   RR E+AN L L+E QIKIWFQN+R K KK
Sbjct:   156 SASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 215

Query:    74 ASGQK 78
                 K
Sbjct:   216 DQKSK 220


>UNIPROTKB|E2RJY7 [details] [associations]
            symbol:DLX6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00700000104129 EMBL:AAEX03009321 EMBL:AAEX03009320
            Ensembl:ENSCAFT00000003439 OMA:HREPREL Uniprot:E2RJY7
        Length = 254

 Score = 160 (61.4 bits), Expect = 9.1e-12, P = 9.1e-12
 Identities = 36/74 (48%), Positives = 45/74 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:   126 NGKGK--KIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 183

Query:    68 RAKIKKASGQ-KNP 80
             R+K KK   Q  NP
Sbjct:   184 RSKFKKLLKQGSNP 197


>ZFIN|ZDB-GENE-000328-5 [details] [associations]
            symbol:hoxc9a "homeo box C9a" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:2001213 "negative
            regulation of vasculogenesis" evidence=IGI] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000328-5 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104054 HOVERGEN:HBG016849
            HOGENOM:HOG000231180 InterPro:IPR017112 PIRSF:PIRSF037109
            EMBL:BX005254 OMA:NNPVANW GO:GO:2001213 IPI:IPI00484007
            UniGene:Dr.132199 SMR:A2BE65 Ensembl:ENSDART00000127384
            InParanoid:A2BE65 Uniprot:A2BE65
        Length = 270

 Score = 147 (56.8 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
 Identities = 32/67 (47%), Positives = 42/67 (62%)

Query:    13 RSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIK 72
             RS  K+ R  ++  Q   L+ EF  N YLT  RR E+A  L L E Q+KIWFQN+R K+K
Sbjct:   200 RSTRKK-RCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMK 258

Query:    73 KASGQKN 79
             K + +KN
Sbjct:   259 KMNKEKN 265

 Score = 31 (16.0 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
 Identities = 6/15 (40%), Positives = 8/15 (53%)

Query:     1 PRSRRIKSGKDKRSK 15
             P +  + SGK K  K
Sbjct:   170 PETESLSSGKHKDDK 184


>UNIPROTKB|P23682 [details] [associations]
            symbol:HOXB3 "Homeobox protein Hox-B3" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG284589
            HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
            InterPro:IPR025281 Pfam:PF13293 OrthoDB:EOG4S4PH1 EMBL:X74506
            EMBL:X52749 IPI:IPI00594134 PIR:S10885 PIR:S71480
            RefSeq:NP_990074.1 UniGene:Gga.2648 ProteinModelPortal:P23682
            SMR:P23682 STRING:P23682 GeneID:395502 KEGG:gga:395502 CTD:3213
            InParanoid:P23682 NextBio:20815581 Uniprot:P23682
        Length = 399

 Score = 166 (63.5 bits), Expect = 9.8e-12, P = 9.8e-12
 Identities = 36/65 (55%), Positives = 42/65 (64%)

Query:    14 SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             S  KR RTA++  QL  L+ EF  NRYL   RR E+AN L L+E QIKIWFQN+R K KK
Sbjct:   157 SASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 216

Query:    74 ASGQK 78
                 K
Sbjct:   217 DQKSK 221


>ZFIN|ZDB-GENE-980526-212 [details] [associations]
            symbol:dlx2a "distal-less homeobox gene 2a"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
            regulatory region sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0051216 "cartilage
            development" evidence=IGI;IMP] [GO:0007422 "peripheral nervous
            system development" evidence=IMP] [GO:0014032 "neural crest cell
            development" evidence=IMP] [GO:0060037 "pharyngeal system
            development" evidence=IMP] [GO:0007275 "multicellular organismal
            development" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-980526-212 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GeneTree:ENSGT00700000104439 HOVERGEN:HBG005493
            InterPro:IPR022135 Pfam:PF12413 OrthoDB:EOG4DZ1W4 EMBL:CU469503
            EMBL:BC095303 IPI:IPI00508726 UniGene:Dr.2 SMR:Q503J7 STRING:Q503J7
            Ensembl:ENSDART00000111386 InParanoid:Q503J7 Uniprot:Q503J7
        Length = 271

 Score = 161 (61.7 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 36/78 (46%), Positives = 50/78 (64%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             R+ +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA  LGL + Q+KIWF
Sbjct:   115 RMVNGKPK--KVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 172

Query:    65 QNKRAKIKKA--SGQKNP 80
             QN+R+K KK   SG+  P
Sbjct:   173 QNRRSKFKKLWKSGEIPP 190


>UNIPROTKB|F1NMG4 [details] [associations]
            symbol:LOC100858374 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 IPI:IPI00593052 EMBL:AADN02000981
            Ensembl:ENSGALT00000018006 OMA:PSDEENM Uniprot:F1NMG4
        Length = 309

 Score = 163 (62.4 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E Q+KIWFQN+R K KK
Sbjct:   210 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 266


>UNIPROTKB|P17277 [details] [associations]
            symbol:HOXA4 "Homeobox protein Hox-A4" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
            HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:X52670 EMBL:X52747
            IPI:IPI00593052 PIR:S09257 RefSeq:NP_001025517.1
            RefSeq:XP_003640746.1 UniGene:Gga.4243 ProteinModelPortal:P17277
            SMR:P17277 GeneID:100858374 GeneID:395307 KEGG:gga:100858374
            KEGG:gga:395307 CTD:3201 eggNOG:NOG257177 InParanoid:P17277
            OrthoDB:EOG4GTKF7 NextBio:20815392 Uniprot:P17277
        Length = 309

 Score = 163 (62.4 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E Q+KIWFQN+R K KK
Sbjct:   210 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 266


>UNIPROTKB|P14838 [details] [associations]
            symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
            eggNOG:NOG305812 EMBL:X16846 IPI:IPI00570687 PIR:S08302
            UniGene:Gga.22931 ProteinModelPortal:P14838 SMR:P14838
            STRING:P14838 Ensembl:ENSGALT00000029223 ArrayExpress:P14838
            Uniprot:P14838
        Length = 82

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 35/63 (55%), Positives = 44/63 (69%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK + 
Sbjct:     8 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 67

Query:    77 QKN 79
              K+
Sbjct:    68 LKS 70


>UNIPROTKB|F5H401 [details] [associations]
            symbol:MNX1 "Motor neuron and pancreas homeobox protein 1"
            species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:AC006357 UniGene:Hs.37035 DNASU:3110 GeneID:3110 KEGG:hsa:3110
            CTD:3110 HGNC:HGNC:4979 KO:K08025 GenomeRNAi:3110 NextBio:12341
            IPI:IPI00925104 RefSeq:NP_001158727.1 ProteinModelPortal:F5H401
            SMR:F5H401 Ensembl:ENST00000543409 UCSC:uc003wnc.1
            ArrayExpress:F5H401 Bgee:F5H401 Uniprot:F5H401
        Length = 189

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 33/74 (44%), Positives = 47/74 (63%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             K +RPRTAF+ +QL  L+ +F  N+YL+  +R E+A  L L E Q+KIWFQN+R K K++
Sbjct:    28 KCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRS 87

Query:    75 SGQKNPLALQLMAQ 88
                K   A +   Q
Sbjct:    88 KKAKEQAAQEAEKQ 101


>FB|FBgn0034520 [details] [associations]
            symbol:lms "lateral muscles scarcer" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0060361 "flight" evidence=IMP]
            [GO:0007526 "larval somatic muscle development" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            EMBL:AE013599 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0007526 GeneTree:ENSGT00700000104206 GO:GO:0060361
            RefSeq:NP_611491.1 UniGene:Dm.36477 ProteinModelPortal:A1ZBV6
            SMR:A1ZBV6 PRIDE:A1ZBV6 EnsemblMetazoa:FBtr0086218 GeneID:37322
            KEGG:dme:Dmel_CG13424 UCSC:CG13424-RA CTD:37322 FlyBase:FBgn0034520
            eggNOG:NOG290719 InParanoid:A1ZBV6 OMA:PIQSIML OrthoDB:EOG4BVQ95
            PhylomeDB:A1ZBV6 GenomeRNAi:37322 NextBio:803112 Bgee:A1ZBV6
            Uniprot:A1ZBV6
        Length = 411

 Score = 166 (63.5 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 36/75 (48%), Positives = 46/75 (61%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIK-K 73
             ++KRPRTAFS  Q+  L+ EF   +YL+  +R  LA +L L E QIKIWFQN+R K K K
Sbjct:   118 RKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRK 177

Query:    74 ASGQKNPLALQLMAQ 88
              +     LA    AQ
Sbjct:   178 YTSDVETLASHYYAQ 192


>ZFIN|ZDB-GENE-040409-1 [details] [associations]
            symbol:mnx1 "motor neuron and pancreas homeobox 1"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-040409-1 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 CTD:3110
            HOGENOM:HOG000234345 HOVERGEN:HBG051910 KO:K08025 HSSP:P14653
            OMA:YNSSDCS EMBL:BX247878 EMBL:BC093243 EMBL:AY445044
            IPI:IPI00504002 RefSeq:NP_001009885.1 UniGene:Dr.91917 SMR:Q6SYZ1
            STRING:Q6SYZ1 Ensembl:ENSDART00000052236 GeneID:405399
            KEGG:dre:405399 InParanoid:Q6SYZ1 NextBio:20817724 Uniprot:Q6SYZ1
        Length = 311

 Score = 163 (62.4 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 36/80 (45%), Positives = 49/80 (61%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             K +RPRTAF+ +QL  L+ +F  N+YL+  +R E+A  L L E Q+KIWFQN+R K K++
Sbjct:   176 KCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRS 235

Query:    75 SGQKNPLALQLMAQ-GLYNH 93
                K   A     Q G  NH
Sbjct:   236 KKAKEQAAQDAEKQKGKGNH 255


>UNIPROTKB|F1PZZ7 [details] [associations]
            symbol:HOXA4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:AAEX03009390 RefSeq:XP_539486.3
            Ensembl:ENSCAFT00000004722 GeneID:482369 KEGG:cfa:482369
            NextBio:20856981 Uniprot:F1PZZ7
        Length = 317

 Score = 163 (62.4 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E Q+KIWFQN+R K KK
Sbjct:   213 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 269


>UNIPROTKB|G3MXN5 [details] [associations]
            symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            GO:GO:0048704 KO:K09304 CTD:3201 OMA:PPGKPQT EMBL:DAAA02010938
            UniGene:Bt.59423 NextBio:20877630 RefSeq:NP_001069602.2
            Ensembl:ENSBTAT00000065144 GeneID:538865 KEGG:bta:538865
            Uniprot:G3MXN5
        Length = 319

 Score = 163 (62.4 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E Q+KIWFQN+R K KK
Sbjct:   215 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 271


>UNIPROTKB|F8VXG0 [details] [associations]
            symbol:HOXB3 "Homeobox protein Hox-B3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            InterPro:IPR025281 Pfam:PF13293 EMBL:AC103702 HGNC:HGNC:5114
            ChiTaRS:HOXB3 IPI:IPI01022378 ProteinModelPortal:F8VXG0 SMR:F8VXG0
            Ensembl:ENST00000490677 ArrayExpress:F8VXG0 Bgee:F8VXG0
            Uniprot:F8VXG0
        Length = 297

 Score = 162 (62.1 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 34/57 (59%), Positives = 40/57 (70%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++  QL  L+ EF  NRYL   RR E+AN L L+E QIKIWFQN+R K KK
Sbjct:    55 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 111


>UNIPROTKB|Q00056 [details] [associations]
            symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0009653 "anatomical structure morphogenesis" evidence=TAS]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 EMBL:CH471073 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009653
            GO:GO:0048704 KO:K09304 EMBL:AC004080 HOGENOM:HOG000231179
            HOVERGEN:HBG016849 CTD:3201 eggNOG:NOG257177 OrthoDB:EOG4GTKF7
            EMBL:M74297 EMBL:M28199 IPI:IPI00020926 PIR:A39724
            RefSeq:NP_002132.3 UniGene:Hs.533357 UniGene:Hs.721126
            ProteinModelPortal:Q00056 SMR:Q00056 STRING:Q00056
            PhosphoSite:Q00056 DMDM:116242514 PaxDb:Q00056 PeptideAtlas:Q00056
            PRIDE:Q00056 DNASU:3201 Ensembl:ENST00000360046
            Ensembl:ENST00000428284 GeneID:3201 KEGG:hsa:3201 UCSC:uc003sym.4
            GeneCards:GC07M027170 HGNC:HGNC:5105 MIM:142953 neXtProt:NX_Q00056
            PharmGKB:PA29382 InParanoid:Q00056 OMA:PPGKPQT PhylomeDB:Q00056
            GenomeRNAi:3201 NextBio:12736 ArrayExpress:Q00056 Bgee:Q00056
            CleanEx:HS_HOXA4 Genevestigator:Q00056 GermOnline:ENSG00000197576
            Uniprot:Q00056
        Length = 320

 Score = 163 (62.4 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E Q+KIWFQN+R K KK
Sbjct:   216 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 272


>UNIPROTKB|B7Z5N8 [details] [associations]
            symbol:HOXB3 "cDNA FLJ51054, highly similar to Homeobox
            protein Hox-B3" species:9606 "Homo sapiens" [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0021546 "rhombomere development"
            evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
            "cartilage development" evidence=IEA] [GO:0060216 "definitive
            hemopoiesis" evidence=IEA] [GO:0060324 "face development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0051216 GO:GO:0060324 GO:GO:0048704 GO:GO:0000979
            GO:GO:0060216 GO:GO:0050767 GO:GO:0030878 HOGENOM:HOG000252944
            HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615
            EMBL:AC103702 UniGene:Hs.654560 HGNC:HGNC:5114 ChiTaRS:HOXB3
            GO:GO:0021546 EMBL:AK299226 IPI:IPI00947370 SMR:B7Z5N8
            STRING:B7Z5N8 Ensembl:ENST00000460160 Ensembl:ENST00000485909
            Uniprot:B7Z5N8
        Length = 299

 Score = 162 (62.1 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 34/57 (59%), Positives = 40/57 (70%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++  QL  L+ EF  NRYL   RR E+AN L L+E QIKIWFQN+R K KK
Sbjct:    57 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 113


>ZFIN|ZDB-GENE-980526-330 [details] [associations]
            symbol:cdx4 "caudal type homeo box transcription
            factor 4" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
            evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA] [GO:0001756
            "somitogenesis" evidence=IGI] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IGI;IMP] [GO:0048793 "pronephros
            development" evidence=IGI;IMP] [GO:0048384 "retinoic acid receptor
            signaling pathway" evidence=IGI] [GO:0031016 "pancreas development"
            evidence=IGI;IMP] [GO:0048617 "embryonic foregut morphogenesis"
            evidence=IMP] [GO:0021906 "hindbrain-spinal cord boundary
            formation" evidence=IMP] [GO:0021903 "rostrocaudal neural tube
            patterning" evidence=IGI] [GO:0009948 "anterior/posterior axis
            specification" evidence=IGI] [GO:0030097 "hemopoiesis"
            evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-330
            GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
            GO:GO:0001756 GO:GO:0030097 GO:GO:0031016 GO:GO:0048384
            GO:GO:0000976 GO:GO:0009948 GO:GO:0048617 GO:GO:0048793
            HOGENOM:HOG000115975 HOVERGEN:HBG005302 GO:GO:0021906 EMBL:X66958
            IPI:IPI00489697 PIR:S25706 UniGene:Dr.11836
            ProteinModelPortal:Q90262 SMR:Q90262 InParanoid:Q90262
            NextBio:20933345 ArrayExpress:Q90262 Uniprot:Q90262
        Length = 300

 Score = 162 (62.1 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 39/76 (51%), Positives = 50/76 (65%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK  R+KEK  R  ++  Q   L+ EF  NRY+T RR+ ELA  LGL+E Q+KIWFQN+
Sbjct:   145 TGKT-RTKEKY-RVVYTDHQRLELEKEFHFNRYITIRRKSELAVNLGLSERQVKIWFQNR 202

Query:    68 RAK----IKKASGQKN 79
             RAK    IKK  GQ +
Sbjct:   203 RAKERKLIKKKLGQSD 218


>UNIPROTKB|F1NCY8 [details] [associations]
            symbol:DLX6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030326
            "embryonic limb morphogenesis" evidence=IEA] [GO:0030855
            "epithelial cell differentiation" evidence=IEA] [GO:0042472 "inner
            ear morphogenesis" evidence=IEA] [GO:0048646 "anatomical structure
            formation involved in morphogenesis" evidence=IEA] [GO:0050679
            "positive regulation of epithelial cell proliferation"
            evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
            [GO:0060322 "head development" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GO:GO:0050679 GeneTree:ENSGT00700000104129 OMA:SPYLPSY
            EMBL:AC145963 IPI:IPI00577838 Ensembl:ENSGALT00000038006
            ArrayExpress:F1NCY8 Uniprot:F1NCY8
        Length = 267

 Score = 160 (61.4 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 36/74 (48%), Positives = 45/74 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:   135 NGKGK--KIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 192

Query:    68 RAKIKKASGQ-KNP 80
             R+K KK   Q  NP
Sbjct:   193 RSKFKKLLKQGSNP 206


>UNIPROTKB|F1SHT2 [details] [associations]
            symbol:HOXA4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            GO:GO:0048704 KO:K09304 OMA:PPGKPQT EMBL:CU570959
            RefSeq:XP_003134889.1 UniGene:Ssc.38326 Ensembl:ENSSSCT00000018185
            GeneID:100519635 KEGG:ssc:100519635 Uniprot:F1SHT2
        Length = 329

 Score = 163 (62.4 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++ +Q+  L+ EF  NRYLT RRR E+A+ L L+E Q+KIWFQN+R K KK
Sbjct:   223 KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 279


>UNIPROTKB|E1B8D8 [details] [associations]
            symbol:HOXA7 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
            differentiation" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045656 "negative regulation of monocyte
            differentiation" evidence=IEA] [GO:0045617 "negative regulation of
            keratinocyte differentiation" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0002686 "negative regulation of
            leukocyte migration" evidence=IEA] [GO:0001953 "negative regulation
            of cell-matrix adhesion" evidence=IEA] [GO:0001525 "angiogenesis"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0048863
            GO:GO:0002686 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0001953
            GO:GO:0048704 CTD:3204 KO:K09307 OMA:EHKDEGP GO:GO:0045617
            GO:GO:0045656 EMBL:DAAA02010938 IPI:IPI00715611
            RefSeq:XP_002686901.1 RefSeq:XP_872865.2 Ensembl:ENSBTAT00000001908
            GeneID:615851 KEGG:bta:615851 NextBio:20899823 Uniprot:E1B8D8
        Length = 238

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 37/75 (49%), Positives = 47/75 (62%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SG D+    KR R  ++  Q   L+ EF  NRYLT RRR E+A+ L L E QIKIWFQN+
Sbjct:   126 SGPDR----KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181

Query:    68 RAKIKKASGQKNPLA 82
             R K KK   +++P A
Sbjct:   182 RMKWKKEHKEESPAA 196


>UNIPROTKB|F1MEU5 [details] [associations]
            symbol:HOXC6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
            skeletal system development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
            CTD:3223 EMBL:DAAA02012839 IPI:IPI00704983 RefSeq:XP_002687279.1
            RefSeq:XP_869789.3 UniGene:Bt.105698 ProteinModelPortal:F1MEU5
            Ensembl:ENSBTAT00000012174 GeneID:317660 KEGG:bta:317660
            NextBio:20807136 Uniprot:F1MEU5
        Length = 235

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 37/75 (49%), Positives = 45/75 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SG    +  +R R  +S  Q   L+ EF  NRYLT RRR E+AN L L E QIKIWFQN+
Sbjct:   133 SGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNR 192

Query:    68 RAKIKKASGQKNPLA 82
             R K KK S   + L+
Sbjct:   193 RMKWKKESNLTSTLS 207


>UNIPROTKB|E2QSK8 [details] [associations]
            symbol:HOXC6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706
            "embryonic skeletal system development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
            CTD:3223 EMBL:AAEX03014973 RefSeq:XP_003433616.1
            Ensembl:ENSCAFT00000010669 GeneID:486499 KEGG:cfa:486499
            NextBio:20860262 Uniprot:E2QSK8
        Length = 235

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 37/75 (49%), Positives = 45/75 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SG    +  +R R  +S  Q   L+ EF  NRYLT RRR E+AN L L E QIKIWFQN+
Sbjct:   133 SGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNR 192

Query:    68 RAKIKKASGQKNPLA 82
             R K KK S   + L+
Sbjct:   193 RMKWKKESNLTSTLS 207


>UNIPROTKB|P09630 [details] [associations]
            symbol:HOXC6 "Homeobox protein Hox-C6" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0048706 "embryonic skeletal system
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003714 "transcription corepressor activity" evidence=TAS]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=TAS] [GO:0007275 "multicellular organismal
            development" evidence=TAS] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003714 GO:GO:0009952 GO:GO:0043565
            EMBL:CH471054 GO:GO:0003700 GO:GO:0006357 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            HOGENOM:HOG000231181 GO:GO:0048706 HOVERGEN:HBG016849 KO:K09306
            UniGene:Hs.549040 eggNOG:NOG266030 OMA:MNSYFAN OrthoDB:EOG41NTMZ
            EMBL:S82986 EMBL:M16938 EMBL:AK314829 EMBL:BC074844 EMBL:BC074845
            IPI:IPI00015921 IPI:IPI00221294 PIR:B28030 RefSeq:NP_004494.1
            RefSeq:NP_710160.1 ProteinModelPortal:P09630 SMR:P09630
            STRING:P09630 PhosphoSite:P09630 DMDM:115502398 PRIDE:P09630
            Ensembl:ENST00000243108 Ensembl:ENST00000394331 GeneID:3223
            KEGG:hsa:3223 UCSC:uc001ses.3 CTD:3223 GeneCards:GC12P054384
            HGNC:HGNC:5128 MIM:142972 neXtProt:NX_P09630 PharmGKB:PA29403
            InParanoid:P09630 PhylomeDB:P09630 GenomeRNAi:3223 NextBio:12825
            ArrayExpress:P09630 Bgee:P09630 CleanEx:HS_HOXC6
            Genevestigator:P09630 GermOnline:ENSG00000197757 Uniprot:P09630
        Length = 235

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 37/75 (49%), Positives = 45/75 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SG    +  +R R  +S  Q   L+ EF  NRYLT RRR E+AN L L E QIKIWFQN+
Sbjct:   133 SGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNR 192

Query:    68 RAKIKKASGQKNPLA 82
             R K KK S   + L+
Sbjct:   193 RMKWKKESNLTSTLS 207


>UNIPROTKB|I3L9Q6 [details] [associations]
            symbol:HOXC6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
            skeletal system development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 GO:GO:0048706 KO:K09306 OMA:MNSYFAN
            EMBL:FP579005 RefSeq:XP_003355472.1 ProteinModelPortal:I3L9Q6
            Ensembl:ENSSSCT00000032524 GeneID:100627932 KEGG:ssc:100627932
            Uniprot:I3L9Q6
        Length = 235

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 37/75 (49%), Positives = 45/75 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SG    +  +R R  +S  Q   L+ EF  NRYLT RRR E+AN L L E QIKIWFQN+
Sbjct:   133 SGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNR 192

Query:    68 RAKIKKASGQKNPLA 82
             R K KK S   + L+
Sbjct:   193 RMKWKKESNLTSTLS 207


>MGI|MGI:96197 [details] [associations]
            symbol:Hoxc6 "homeobox C6" species:10090 "Mus musculus"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048706 "embryonic skeletal system development"
            evidence=IGI] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96197
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
            GO:GO:0048706 HOVERGEN:HBG016849 KO:K09306 eggNOG:NOG266030
            OMA:MNSYFAN OrthoDB:EOG41NTMZ CTD:3223 EMBL:J03074 EMBL:M35986
            EMBL:X16511 EMBL:X16510 EMBL:S74185 EMBL:X12504 EMBL:X16838
            IPI:IPI00310548 IPI:IPI00387269 PIR:A32167 PIR:A56568 PIR:S00987
            RefSeq:NP_034595.2 UniGene:Mm.4444 ProteinModelPortal:P10629
            SMR:P10629 STRING:P10629 PhosphoSite:P10629 PRIDE:P10629
            Ensembl:ENSMUST00000001711 GeneID:15425 KEGG:mmu:15425
            InParanoid:P10629 ChiTaRS:HOXC6 NextBio:288174 Bgee:P10629
            CleanEx:MM_HOXC6 Genevestigator:P10629
            GermOnline:ENSMUSG00000001661 Uniprot:P10629
        Length = 235

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 37/75 (49%), Positives = 45/75 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SG    +  +R R  +S  Q   L+ EF  NRYLT RRR E+AN L L E QIKIWFQN+
Sbjct:   133 SGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNR 192

Query:    68 RAKIKKASGQKNPLA 82
             R K KK S   + L+
Sbjct:   193 RMKWKKESNLTSTLS 207


>UNIPROTKB|G3V841 [details] [associations]
            symbol:Hoxc6 "Homeo box C6" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0048706 "embryonic skeletal system
            development" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104090 EMBL:CH474035 KO:K09306 OMA:MNSYFAN
            CTD:3223 EMBL:AC116663 RefSeq:XP_001069410.2 RefSeq:XP_003750463.1
            ProteinModelPortal:G3V841 SMR:G3V841 PRIDE:G3V841
            Ensembl:ENSRNOT00000022217 GeneID:252885 KEGG:rno:252885
            Uniprot:G3V841
        Length = 235

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 37/75 (49%), Positives = 45/75 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SG    +  +R R  +S  Q   L+ EF  NRYLT RRR E+AN L L E QIKIWFQN+
Sbjct:   133 SGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNR 192

Query:    68 RAKIKKASGQKNPLA 82
             R K KK S   + L+
Sbjct:   193 RMKWKKESNLTSTLS 207


>WB|WBGene00000430 [details] [associations]
            symbol:ceh-5 species:6239 "Caenorhabditis elegans"
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
            ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
            GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
            WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
            HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
            Uniprot:P20269
        Length = 134

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 30/67 (44%), Positives = 45/67 (67%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             + KRPRT F+ EQL +L+  F  + YL+   R +LA  LGL++ Q+K+WFQN+R K KK 
Sbjct:    34 RPKRPRTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQKKI 93

Query:    75 SGQKNPL 81
                ++P+
Sbjct:    94 DS-RDPI 99


>ZFIN|ZDB-GENE-980526-448 [details] [associations]
            symbol:dlx6a "distal-less homeobox gene 6a"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-448
            GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00700000104129 HOGENOM:HOG000231941
            HOVERGEN:HBG005493 KO:K09314 eggNOG:NOG289877 EMBL:U67844
            IPI:IPI00483552 RefSeq:NP_571398.1 UniGene:Dr.75092
            ProteinModelPortal:Q98877 SMR:Q98877 STRING:Q98877
            Ensembl:ENSDART00000102778 GeneID:30586 KEGG:dre:30586 CTD:30586
            OMA:SPYLPSY OrthoDB:EOG4QJRP4 NextBio:20806956 ArrayExpress:Q98877
            Bgee:Q98877 Uniprot:Q98877
        Length = 247

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 36/74 (48%), Positives = 45/74 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:   119 NGKGK--KIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 176

Query:    68 RAKIKKASGQK-NP 80
             R+K KK   Q  NP
Sbjct:   177 RSKFKKLLKQGGNP 190


>ZFIN|ZDB-GENE-040615-2 [details] [associations]
            symbol:nkx1.2lb "NK1 transcription factor related
            2-like,b" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-040615-2 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HSSP:P02833 GeneTree:ENSGT00660000095141
            eggNOG:NOG286158 HOVERGEN:HBG052632 KO:K09309 OrthoDB:EOG4SBF0J
            EMBL:BX119314 EMBL:BC129149 EMBL:AB121758 IPI:IPI00487472
            RefSeq:NP_998713.1 UniGene:Dr.87516 SMR:Q75W95
            Ensembl:ENSDART00000002085 GeneID:407077 KEGG:dre:407077 CTD:407077
            HOGENOM:HOG000264254 InParanoid:Q75W95 OMA:SPPMSGH NextBio:20818361
            Uniprot:Q75W95
        Length = 373

 Score = 164 (62.8 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 36/73 (49%), Positives = 47/73 (64%)

Query:     2 RSRRIKSGKDKRS-KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             + +R +SG D +S K +R RTAF+ EQL  L+ +F   RYL+   R  LA  L L E Q+
Sbjct:   212 KPKRKRSGSDSKSGKPRRARTAFTYEQLVALENKFKSTRYLSVCERLNLALSLSLTETQV 271

Query:    61 KIWFQNKRAKIKK 73
             KIWFQN+R K KK
Sbjct:   272 KIWFQNRRTKWKK 284


>ZFIN|ZDB-GENE-980526-18 [details] [associations]
            symbol:dlx2b "distal-less homeobox gene 2b"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-18 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG263092
            GeneTree:ENSGT00700000104439 HOVERGEN:HBG005493 EMBL:U67843
            IPI:IPI00485864 RefSeq:NP_571372.1 UniGene:Dr.136
            ProteinModelPortal:Q98876 SMR:Q98876 STRING:Q98876
            Ensembl:ENSDART00000008469 GeneID:30557 KEGG:dre:30557 CTD:30557
            HOGENOM:HOG000231940 InParanoid:Q98876 NextBio:20806932
            ArrayExpress:Q98876 Bgee:Q98876 InterPro:IPR022135 Pfam:PF12413
            Uniprot:Q98876
        Length = 276

 Score = 160 (61.4 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 39/93 (41%), Positives = 54/93 (58%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             R+ +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA  LGL + Q+KIWF
Sbjct:   116 RMVNGKPK--KVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 173

Query:    65 QNKRAKIKKASGQKNPLALQLMAQGLYNHSTVP 97
             QN+R+K KK        A Q +A G    S+ P
Sbjct:   174 QNRRSKFKKLWKNGEIPADQQVASGDSPSSSPP 206


>UNIPROTKB|Q90Z54 [details] [associations]
            symbol:CDXB "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
            PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
            GeneTree:ENSGT00530000063388 GO:GO:0000976 eggNOG:NOG291290
            KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 CTD:1046
            EMBL:AADN02013531 EMBL:AADN02013532 EMBL:AF353624 IPI:IPI00575574
            RefSeq:NP_989945.1 UniGene:Gga.49855 SMR:Q90Z54
            Ensembl:ENSGALT00000012401 GeneID:395320 KEGG:gga:395320
            InParanoid:Q90Z54 OMA:YHHVPNM NextBio:20815405 Uniprot:Q90Z54
        Length = 263

 Score = 159 (61.0 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 36/71 (50%), Positives = 48/71 (67%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK  R+KEK  R  ++  Q   L+ EF  NRY+T RR+ ELA  LGL+E Q+KIWFQN+
Sbjct:   146 TGKT-RTKEKY-RVVYTDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNR 203

Query:    68 RAKIKKASGQK 78
             RAK +K   +K
Sbjct:   204 RAKERKIIKKK 214


>RGD|1561539 [details] [associations]
            symbol:Dlx6 "distal-less homeobox 6" species:10116 "Rattus
            norvegicus" [GO:0030326 "embryonic limb morphogenesis"
            evidence=ISO] [GO:0030855 "epithelial cell differentiation"
            evidence=ISO] [GO:0042472 "inner ear morphogenesis" evidence=ISO]
            [GO:0048646 "anatomical structure formation involved in
            morphogenesis" evidence=ISO] [GO:0050679 "positive regulation of
            epithelial cell proliferation" evidence=ISO] [GO:0060021 "palate
            development" evidence=ISO] [GO:0060322 "head development"
            evidence=ISO] REFSEQ:XM_575377 Ncbi:XP_575377
        Length = 278

 Score = 160 (61.4 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 36/74 (48%), Positives = 45/74 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:   146 NGKGK--KIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 203

Query:    68 RAKIKKASGQ-KNP 80
             R+K KK   Q  NP
Sbjct:   204 RSKFKKLLKQGSNP 217


>UNIPROTKB|E2RKQ8 [details] [associations]
            symbol:CDX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349
            "bone morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
            GO:GO:0000976 GO:GO:0060349 KO:K09312 CTD:1044 OMA:YSHVEPG
            EMBL:AAEX03003101 RefSeq:XP_855089.1 Ensembl:ENSCAFT00000028928
            GeneID:612256 KEGG:cfa:612256 NextBio:20897788 Uniprot:E2RKQ8
        Length = 265

 Score = 159 (61.0 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 35/71 (49%), Positives = 48/71 (67%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SGK  R+K+K  R  ++  Q   L+ EF  +RY+T RR+ ELA  LGL E Q+KIWFQN+
Sbjct:   148 SGKT-RTKDKY-RVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNR 205

Query:    68 RAKIKKASGQK 78
             RAK +K + +K
Sbjct:   206 RAKERKVNKKK 216


>UNIPROTKB|P47902 [details] [associations]
            symbol:CDX1 "Homeobox protein CDX-1" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0060349 "bone morphogenesis" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0009887 "organ morphogenesis"
            evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887 GO:GO:0000976
            GO:GO:0060349 eggNOG:NOG291290 KO:K09312 CTD:1044
            HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
            EMBL:U16360 EMBL:U15212 EMBL:U51095 EMBL:AF239666 EMBL:BC096251
            IPI:IPI00790637 IPI:IPI00795021 PIR:I38868 PIR:I38881
            RefSeq:NP_001795.2 UniGene:Hs.1545 ProteinModelPortal:P47902
            SMR:P47902 MINT:MINT-6800278 STRING:P47902 PhosphoSite:P47902
            DMDM:116241291 PRIDE:P47902 Ensembl:ENST00000231656 GeneID:1044
            KEGG:hsa:1044 UCSC:uc003lrq.3 GeneCards:GC05P149526 HGNC:HGNC:1805
            MIM:600746 neXtProt:NX_P47902 PharmGKB:PA26351 InParanoid:P47902
            OMA:YSHVEPG PhylomeDB:P47902 GenomeRNAi:1044 NextBio:4377
            ArrayExpress:P47902 Bgee:P47902 CleanEx:HS_CDX1
            Genevestigator:P47902 GermOnline:ENSG00000113722 Uniprot:P47902
        Length = 265

 Score = 159 (61.0 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 35/71 (49%), Positives = 48/71 (67%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SGK  R+K+K  R  ++  Q   L+ EF  +RY+T RR+ ELA  LGL E Q+KIWFQN+
Sbjct:   148 SGKT-RTKDKY-RVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNR 205

Query:    68 RAKIKKASGQK 78
             RAK +K + +K
Sbjct:   206 RAKERKVNKKK 216


>UNIPROTKB|Q07687 [details] [associations]
            symbol:DLX2 "Homeobox protein DLX-2" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0021882 "regulation of transcription from RNA
            polymerase II promoter involved in forebrain neuron fate
            commitment" evidence=IEA] [GO:0021893 "cerebral cortex GABAergic
            interneuron fate commitment" evidence=IEA] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0048701 "embryonic
            cranial skeleton morphogenesis" evidence=IEA] [GO:0048715 "negative
            regulation of oligodendrocyte differentiation" evidence=IEA]
            [GO:0048755 "branching morphogenesis of a nerve" evidence=IEA]
            [GO:0051216 "cartilage development" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003727 "single-stranded RNA binding"
            evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
            evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
            [GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0007420 "brain development"
            evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0021766 GO:GO:0007420 GO:GO:0003727 GO:GO:0045944
            GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216
            GO:GO:0042475 GO:GO:0009954 GO:GO:0000976 GO:GO:0048701
            GO:GO:0048715 GO:GO:0021772 eggNOG:NOG263092 HOVERGEN:HBG005493
            GO:GO:0021893 GO:GO:0021882 HOGENOM:HOG000231940 InterPro:IPR022135
            Pfam:PF12413 EMBL:U51003 EMBL:BC032558 EMBL:L07919 IPI:IPI00018974
            PIR:B53495 PIR:G02469 RefSeq:NP_004396.1 UniGene:Hs.419
            ProteinModelPortal:Q07687 SMR:Q07687 IntAct:Q07687 STRING:Q07687
            PhosphoSite:Q07687 DMDM:2506529 PaxDb:Q07687 PRIDE:Q07687
            DNASU:1746 Ensembl:ENST00000234198 GeneID:1746 KEGG:hsa:1746
            UCSC:uc002uhn.3 CTD:1746 GeneCards:GC02M172964 HGNC:HGNC:2915
            HPA:HPA039071 MIM:126255 neXtProt:NX_Q07687 PharmGKB:PA27370
            InParanoid:Q07687 KO:K09315 OMA:SAFLGNY OrthoDB:EOG4DZ1W4
            PhylomeDB:Q07687 GenomeRNAi:1746 NextBio:7083 ArrayExpress:Q07687
            Bgee:Q07687 CleanEx:HS_DLX2 Genevestigator:Q07687
            GermOnline:ENSG00000115844 GO:GO:0048755 Uniprot:Q07687
        Length = 328

 Score = 162 (62.1 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 34/69 (49%), Positives = 46/69 (66%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             RI +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA  LGL + Q+KIWF
Sbjct:   143 RIVNGKPK--KVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 200

Query:    65 QNKRAKIKK 73
             QN+R+K KK
Sbjct:   201 QNRRSKFKK 209


>UNIPROTKB|F1S082 [details] [associations]
            symbol:DLX2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216 "cartilage
            development" evidence=IEA] [GO:0048755 "branching morphogenesis of
            a nerve" evidence=IEA] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=IEA] [GO:0048701
            "embryonic cranial skeleton morphogenesis" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0021893 "cerebral cortex
            GABAergic interneuron fate commitment" evidence=IEA] [GO:0021882
            "regulation of transcription from RNA polymerase II promoter
            involved in forebrain neuron fate commitment" evidence=IEA]
            [GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021766
            "hippocampus development" evidence=IEA] [GO:0009954
            "proximal/distal pattern formation" evidence=IEA] [GO:0003727
            "single-stranded RNA binding" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0021766
            GO:GO:0003727 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0051216 GO:GO:0042475 GO:GO:0009954
            GO:GO:0000976 GO:GO:0048701 GO:GO:0048715 GO:GO:0021772
            GeneTree:ENSGT00700000104439 GO:GO:0021893 GO:GO:0021882
            InterPro:IPR022135 Pfam:PF12413 KO:K09315 OMA:SAFLGNY GO:GO:0048755
            EMBL:CU915442 RefSeq:XP_003133525.1 UniGene:Ssc.93835
            Ensembl:ENSSSCT00000017371 GeneID:100523029 KEGG:ssc:100523029
            Uniprot:F1S082
        Length = 328

 Score = 162 (62.1 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 34/69 (49%), Positives = 46/69 (66%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             RI +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA  LGL + Q+KIWF
Sbjct:   142 RIVNGKPK--KVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 199

Query:    65 QNKRAKIKK 73
             QN+R+K KK
Sbjct:   200 QNRRSKFKK 208


>MGI|MGI:88360 [details] [associations]
            symbol:Cdx1 "caudal type homeobox 1" species:10090 "Mus
            musculus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IMP] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0060349 "bone morphogenesis" evidence=IGI;IMP]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
            PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:88360 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000976
            GO:GO:0060349 eggNOG:NOG291290 KO:K09312 CTD:1044
            HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
            OMA:YSHVEPG EMBL:M37163 EMBL:M80463 EMBL:BC019986 IPI:IPI00109616
            PIR:A49303 RefSeq:NP_034010.3 UniGene:Mm.144448
            ProteinModelPortal:P18111 SMR:P18111 STRING:P18111
            PhosphoSite:P18111 PRIDE:P18111 Ensembl:ENSMUST00000025521
            GeneID:12590 KEGG:mmu:12590 UCSC:uc008fbj.2 InParanoid:P18111
            NextBio:281734 Bgee:P18111 CleanEx:MM_CDX1 Genevestigator:P18111
            GermOnline:ENSMUSG00000024619 Uniprot:P18111
        Length = 268

 Score = 159 (61.0 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 35/71 (49%), Positives = 48/71 (67%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SGK  R+K+K  R  ++  Q   L+ EF  +RY+T RR+ ELA  LGL E Q+KIWFQN+
Sbjct:   148 SGKT-RTKDKY-RVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNR 205

Query:    68 RAKIKKASGQK 78
             RAK +K + +K
Sbjct:   206 RAKERKVNKKK 216


>ZFIN|ZDB-GENE-980526-280 [details] [associations]
            symbol:dlx3b "distal-less homeobox gene 3b"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0048666 "neuron
            development" evidence=IGI] [GO:0021559 "trigeminal nerve
            development" evidence=IGI] [GO:0043010 "camera-type eye
            development" evidence=IGI] [GO:0035270 "endocrine system
            development" evidence=IGI] [GO:0043049 "otic placode formation"
            evidence=IGI;IMP] [GO:0030916 "otic vesicle formation"
            evidence=IGI;IMP] [GO:0051216 "cartilage development" evidence=IGI]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-280
            GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043010 GO:GO:0048666
            GO:GO:0051216 GO:GO:0000976 GO:GO:0021559 GO:GO:0043049
            GeneTree:ENSGT00700000104439 HOVERGEN:HBG005493 InterPro:IPR022135
            Pfam:PF12413 KO:K09315 GO:GO:0035270 EMBL:CU468219 EMBL:BC078386
            IPI:IPI00516065 RefSeq:NP_571397.2 UniGene:Dr.77568 SMR:Q6DBS2
            STRING:Q6DBS2 DNASU:30585 Ensembl:ENSDART00000017191 GeneID:30585
            KEGG:dre:30585 CTD:30585 InParanoid:Q6DBS2 OMA:SAGHAYE
            NextBio:20806955 Uniprot:Q6DBS2
        Length = 269

 Score = 159 (61.0 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 33/69 (47%), Positives = 47/69 (68%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             R+ +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA +LGL + Q+KIWF
Sbjct:   116 RMVNGKPK--KIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWF 173

Query:    65 QNKRAKIKK 73
             QN+R+K KK
Sbjct:   174 QNRRSKFKK 182


>UNIPROTKB|D4ABR4 [details] [associations]
            symbol:RGD1561539 "Protein RGD1561539" species:10116
            "Rattus norvegicus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0042472 GO:GO:0030326 GO:GO:0060021 GO:GO:0000976
            GO:GO:0050679 GO:GO:0030855 GO:GO:0060322
            GeneTree:ENSGT00700000104129 OrthoDB:EOG4QJRP4 IPI:IPI00210686
            Ensembl:ENSRNOT00000014468 Uniprot:D4ABR4
        Length = 285

 Score = 160 (61.4 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 36/74 (48%), Positives = 45/74 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:   153 NGKGK--KIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 210

Query:    68 RAKIKKASGQ-KNP 80
             R+K KK   Q  NP
Sbjct:   211 RSKFKKLLKQGSNP 224


>UNIPROTKB|E1BCF7 [details] [associations]
            symbol:DLX2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216 "cartilage
            development" evidence=IEA] [GO:0048755 "branching morphogenesis of
            a nerve" evidence=IEA] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=IEA] [GO:0048701
            "embryonic cranial skeleton morphogenesis" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0021893 "cerebral cortex
            GABAergic interneuron fate commitment" evidence=IEA] [GO:0021882
            "regulation of transcription from RNA polymerase II promoter
            involved in forebrain neuron fate commitment" evidence=IEA]
            [GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021766
            "hippocampus development" evidence=IEA] [GO:0009954
            "proximal/distal pattern formation" evidence=IEA] [GO:0003727
            "single-stranded RNA binding" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0021766
            GO:GO:0003727 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0051216 GO:GO:0042475 GO:GO:0009954
            GO:GO:0000976 GO:GO:0048701 GO:GO:0048715 GO:GO:0021772
            GeneTree:ENSGT00700000104439 GO:GO:0021893 GO:GO:0021882
            InterPro:IPR022135 Pfam:PF12413 CTD:1746 KO:K09315 OMA:SAFLGNY
            GO:GO:0048755 EMBL:DAAA02004227 IPI:IPI00843588
            RefSeq:NP_001179591.1 UniGene:Bt.87151 Ensembl:ENSBTAT00000046765
            GeneID:528490 KEGG:bta:528490 NextBio:20874839 Uniprot:E1BCF7
        Length = 331

 Score = 162 (62.1 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 34/69 (49%), Positives = 46/69 (66%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             RI +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA  LGL + Q+KIWF
Sbjct:   143 RIVNGKPK--KVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 200

Query:    65 QNKRAKIKK 73
             QN+R+K KK
Sbjct:   201 QNRRSKFKK 209


>MGI|MGI:94902 [details] [associations]
            symbol:Dlx2 "distal-less homeobox 2" species:10090 "Mus
            musculus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=IGI] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
            "chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0003727 "single-stranded RNA binding" evidence=IPI] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
            evidence=IGI;IMP] [GO:0021766 "hippocampus development"
            evidence=IGI] [GO:0021772 "olfactory bulb development"
            evidence=IMP] [GO:0021879 "forebrain neuron differentiation"
            evidence=IGI] [GO:0021882 "regulation of transcription from RNA
            polymerase II promoter involved in forebrain neuron fate
            commitment" evidence=IGI] [GO:0021892 "cerebral cortex GABAergic
            interneuron differentiation" evidence=IGI] [GO:0021893 "cerebral
            cortex GABAergic interneuron fate commitment" evidence=IGI]
            [GO:0030154 "cell differentiation" evidence=IMP] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=IGI]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IGI] [GO:0048701 "embryonic
            cranial skeleton morphogenesis" evidence=IMP] [GO:0048706
            "embryonic skeletal system development" evidence=IGI;IMP]
            [GO:0048715 "negative regulation of oligodendrocyte
            differentiation" evidence=IGI] [GO:0048755 "branching morphogenesis
            of a nerve" evidence=IMP] [GO:0051216 "cartilage development"
            evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:94902
            GO:GO:0005634 GO:GO:0021766 GO:GO:0003677 GO:GO:0003727
            GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0051216 GO:GO:0042475 GO:GO:0009954 GO:GO:0000976
            GO:GO:0048701 GO:GO:0048715 GO:GO:0021772 eggNOG:NOG263092
            HOVERGEN:HBG005493 GO:GO:0021893 GO:GO:0021882 HOGENOM:HOG000231940
            InterPro:IPR022135 Pfam:PF12413 CTD:1746 KO:K09315 OMA:SAFLGNY
            OrthoDB:EOG4DZ1W4 GO:GO:0048755 EMBL:M80540 EMBL:M83184 EMBL:U51002
            IPI:IPI00113692 PIR:A45581 PIR:JH0465 RefSeq:NP_034184.1
            UniGene:Mm.3896 ProteinModelPortal:P40764 SMR:P40764 STRING:P40764
            PhosphoSite:P40764 PRIDE:P40764 Ensembl:ENSMUST00000024159
            GeneID:13392 KEGG:mmu:13392 InParanoid:P40764 NextBio:283760
            Bgee:P40764 CleanEx:MM_DLX2 Genevestigator:P40764
            GermOnline:ENSMUSG00000023391 Uniprot:P40764
        Length = 332

 Score = 162 (62.1 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 34/69 (49%), Positives = 46/69 (66%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             RI +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA  LGL + Q+KIWF
Sbjct:   146 RIVNGKPK--KVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 203

Query:    65 QNKRAKIKK 73
             QN+R+K KK
Sbjct:   204 QNRRSKFKK 212


>UNIPROTKB|Q6B3N0 [details] [associations]
            symbol:HOXA5 "Homeobox protein Hox-A5" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
            PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOVERGEN:HBG016849 eggNOG:NOG236516 CTD:3202
            KO:K09305 EMBL:AY686640 IPI:IPI00602185 RefSeq:XP_003640747.1
            RefSeq:XP_003640753.1 RefSeq:XP_003640770.1 UniGene:Gga.11995
            ProteinModelPortal:Q6B3N0 SMR:Q6B3N0 STRING:Q6B3N0 GeneID:100857257
            GeneID:100858404 GeneID:100858834 KEGG:gga:100857257
            KEGG:gga:100858404 KEGG:gga:100858834 Uniprot:Q6B3N0
        Length = 270

 Score = 159 (61.0 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 35/63 (55%), Positives = 44/63 (69%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK + 
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 255

Query:    77 QKN 79
              K+
Sbjct:   256 LKS 258


>UNIPROTKB|Q2HJ67 [details] [associations]
            symbol:HOXA5 "Homeobox protein Hox-A5" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764 "cell-cell
            signaling involved in mammary gland development" evidence=IEA]
            [GO:0060749 "mammary gland alveolus development" evidence=IEA]
            [GO:0060644 "mammary gland epithelial cell differentiation"
            evidence=IEA] [GO:0060638 "mesenchymal-epithelial cell signaling"
            evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
            evidence=IEA] [GO:0060535 "trachea cartilage morphogenesis"
            evidence=IEA] [GO:0060484 "lung-associated mesenchyme development"
            evidence=IEA] [GO:0060480 "lung goblet cell differentiation"
            evidence=IEA] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
            development" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] [GO:0048286 "lung alveolus
            development" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045647 "negative regulation of erythrocyte differentiation"
            evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
            differentiation" evidence=IEA] [GO:0043065 "positive regulation of
            apoptotic process" evidence=IEA] [GO:0035264 "multicellular
            organism growth" evidence=IEA] [GO:0033599 "regulation of mammary
            gland epithelial cell proliferation" evidence=IEA] [GO:0030878
            "thyroid gland development" evidence=IEA] [GO:0016525 "negative
            regulation of angiogenesis" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0010870 "positive regulation of
            receptor biosynthetic process" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0003016 "respiratory system process"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286 GO:GO:0035264
            GO:GO:0003016 GO:GO:0016525 GO:GO:0060749 GO:GO:0060644
            GO:GO:0048704 GO:GO:0033599 GO:GO:0060441 GO:GO:0060484
            GO:GO:0030878 GO:GO:0010870 GeneTree:ENSGT00700000104189
            GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849
            eggNOG:NOG236516 HOGENOM:HOG000231178 OMA:YRDSASM OrthoDB:EOG49S677
            EMBL:BC113284 IPI:IPI00711374 RefSeq:NP_001070566.1
            UniGene:Bt.11342 ProteinModelPortal:Q2HJ67 SMR:Q2HJ67 PRIDE:Q2HJ67
            Ensembl:ENSBTAT00000016196 GeneID:768039 KEGG:bta:768039 CTD:3202
            InParanoid:Q2HJ67 KO:K09305 NextBio:20918394 GO:GO:0060435
            GO:GO:0060764 GO:GO:0060480 GO:GO:0060638 GO:GO:0060535
            Uniprot:Q2HJ67
        Length = 270

 Score = 159 (61.0 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 35/63 (55%), Positives = 44/63 (69%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK + 
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 255

Query:    77 QKN 79
              K+
Sbjct:   256 LKS 258


>UNIPROTKB|E2R5W8 [details] [associations]
            symbol:HOXA5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764
            "cell-cell signaling involved in mammary gland development"
            evidence=IEA] [GO:0060749 "mammary gland alveolus development"
            evidence=IEA] [GO:0060644 "mammary gland epithelial cell
            differentiation" evidence=IEA] [GO:0060638 "mesenchymal-epithelial
            cell signaling" evidence=IEA] [GO:0060574 "intestinal epithelial
            cell maturation" evidence=IEA] [GO:0060535 "trachea cartilage
            morphogenesis" evidence=IEA] [GO:0060484 "lung-associated
            mesenchyme development" evidence=IEA] [GO:0060480 "lung goblet cell
            differentiation" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0060435
            "bronchiole development" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0048286 "lung
            alveolus development" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045647 "negative regulation of erythrocyte
            differentiation" evidence=IEA] [GO:0045639 "positive regulation of
            myeloid cell differentiation" evidence=IEA] [GO:0043065 "positive
            regulation of apoptotic process" evidence=IEA] [GO:0035264
            "multicellular organism growth" evidence=IEA] [GO:0033599
            "regulation of mammary gland epithelial cell proliferation"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0016525 "negative regulation of angiogenesis" evidence=IEA]
            [GO:0016477 "cell migration" evidence=IEA] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003016
            "respiratory system process" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0016477 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0043065 GO:GO:0048286 GO:GO:0035264
            GO:GO:0003016 GO:GO:0016525 GO:GO:0060749 GO:GO:0060644
            GO:GO:0048704 GO:GO:0033599 GO:GO:0060441 GO:GO:0060484
            GO:GO:0030878 GO:GO:0010870 GeneTree:ENSGT00700000104189
            GO:GO:0045639 GO:GO:0045647 GO:GO:0060574 OMA:YRDSASM CTD:3202
            KO:K09305 GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
            GO:GO:0060535 EMBL:AAEX03009390 RefSeq:XP_539487.2
            ProteinModelPortal:E2R5W8 SMR:E2R5W8 PRIDE:E2R5W8
            Ensembl:ENSCAFT00000004723 GeneID:482370 KEGG:cfa:482370
            NextBio:20856983 Uniprot:E2R5W8
        Length = 270

 Score = 159 (61.0 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 35/63 (55%), Positives = 44/63 (69%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK + 
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 255

Query:    77 QKN 79
              K+
Sbjct:   256 LKS 258


>UNIPROTKB|P20719 [details] [associations]
            symbol:HOXA5 "Homeobox protein Hox-A5" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003016 "respiratory system process" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0016477 "cell migration" evidence=IEA] [GO:0030878 "thyroid
            gland development" evidence=IEA] [GO:0033599 "regulation of mammary
            gland epithelial cell proliferation" evidence=IEA] [GO:0035264
            "multicellular organism growth" evidence=IEA] [GO:0048286 "lung
            alveolus development" evidence=IEA] [GO:0048704 "embryonic skeletal
            system morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
            development" evidence=IEA] [GO:0060441 "epithelial tube branching
            involved in lung morphogenesis" evidence=IEA] [GO:0060480 "lung
            goblet cell differentiation" evidence=IEA] [GO:0060484
            "lung-associated mesenchyme development" evidence=IEA] [GO:0060535
            "trachea cartilage morphogenesis" evidence=IEA] [GO:0060574
            "intestinal epithelial cell maturation" evidence=IEA] [GO:0060638
            "mesenchymal-epithelial cell signaling" evidence=IEA] [GO:0060644
            "mammary gland epithelial cell differentiation" evidence=IEA]
            [GO:0060749 "mammary gland alveolus development" evidence=IEA]
            [GO:0060764 "cell-cell signaling involved in mammary gland
            development" evidence=IEA] [GO:0016525 "negative regulation of
            angiogenesis" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0043065 "positive regulation of
            apoptotic process" evidence=IDA] [GO:0010870 "positive regulation
            of receptor biosynthetic process" evidence=IDA] [GO:0003677 "DNA
            binding" evidence=IDA] [GO:0045639 "positive regulation of myeloid
            cell differentiation" evidence=IDA] [GO:0045647 "negative
            regulation of erythrocyte differentiation" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
            GO:GO:0009952 GO:GO:0003677 EMBL:CH471073 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 EMBL:CH236948
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
            GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
            GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
            GO:GO:0010870 EMBL:AC004080 GO:GO:0045639 GO:GO:0045647
            GO:GO:0060574 HOVERGEN:HBG016849 eggNOG:NOG236516
            HOGENOM:HOG000231178 OMA:YRDSASM OrthoDB:EOG49S677 CTD:3202
            KO:K09305 GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
            GO:GO:0060535 EMBL:M26679 EMBL:BT009744 EMBL:CR542256 EMBL:BC013682
            IPI:IPI00302291 PIR:A24777 PIR:A32799 RefSeq:NP_061975.2
            UniGene:Hs.655218 ProteinModelPortal:P20719 SMR:P20719
            STRING:P20719 PhosphoSite:P20719 DMDM:52788238 PRIDE:P20719
            DNASU:3202 Ensembl:ENST00000222726 GeneID:3202 KEGG:hsa:3202
            UCSC:uc003syn.2 GeneCards:GC07M027180 H-InvDB:HIX0201165
            HGNC:HGNC:5106 HPA:CAB032627 HPA:HPA029319 MIM:142952
            neXtProt:NX_P20719 PharmGKB:PA29383 InParanoid:P20719
            PhylomeDB:P20719 GenomeRNAi:3202 NextBio:12740 Bgee:P20719
            CleanEx:HS_HOXA5 Genevestigator:P20719 GermOnline:ENSG00000106004
            Uniprot:P20719
        Length = 270

 Score = 159 (61.0 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 35/63 (55%), Positives = 44/63 (69%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK + 
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 255

Query:    77 QKN 79
              K+
Sbjct:   256 LKS 258


>UNIPROTKB|E1U314 [details] [associations]
            symbol:Hoxa5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764 "cell-cell
            signaling involved in mammary gland development" evidence=IEA]
            [GO:0060749 "mammary gland alveolus development" evidence=IEA]
            [GO:0060644 "mammary gland epithelial cell differentiation"
            evidence=IEA] [GO:0060638 "mesenchymal-epithelial cell signaling"
            evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
            evidence=IEA] [GO:0060535 "trachea cartilage morphogenesis"
            evidence=IEA] [GO:0060484 "lung-associated mesenchyme development"
            evidence=IEA] [GO:0060480 "lung goblet cell differentiation"
            evidence=IEA] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
            development" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] [GO:0048286 "lung alveolus
            development" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045647 "negative regulation of erythrocyte differentiation"
            evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
            differentiation" evidence=IEA] [GO:0043065 "positive regulation of
            apoptotic process" evidence=IEA] [GO:0035264 "multicellular
            organism growth" evidence=IEA] [GO:0033599 "regulation of mammary
            gland epithelial cell proliferation" evidence=IEA] [GO:0030878
            "thyroid gland development" evidence=IEA] [GO:0016525 "negative
            regulation of angiogenesis" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0010870 "positive regulation of
            receptor biosynthetic process" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0003016 "respiratory system process"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
            GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
            GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
            GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
            GO:GO:0010870 GeneTree:ENSGT00700000104189 GO:GO:0045639
            GO:GO:0045647 GO:GO:0060574 OMA:YRDSASM CTD:3202 KO:K09305
            GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
            GO:GO:0060535 EMBL:CU570959 EMBL:EU914851 EMBL:EU914852
            RefSeq:NP_001182161.1 UniGene:Ssc.47987 Ensembl:ENSSSCT00000018184
            GeneID:100499568 KEGG:ssc:100499568 Uniprot:E1U314
        Length = 270

 Score = 159 (61.0 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 35/63 (55%), Positives = 44/63 (69%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK + 
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 255

Query:    77 QKN 79
              K+
Sbjct:   256 LKS 258


>MGI|MGI:96177 [details] [associations]
            symbol:Hoxa5 "homeobox A5" species:10090 "Mus musculus"
            [GO:0001501 "skeletal system development" evidence=IMP] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0003016
            "respiratory system process" evidence=IMP] [GO:0003677 "DNA
            binding" evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISO] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IMP] [GO:0007585 "respiratory gaseous exchange"
            evidence=IMP] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IGI;IMP] [GO:0010870 "positive regulation
            of receptor biosynthetic process" evidence=ISO] [GO:0016477 "cell
            migration" evidence=IMP] [GO:0016525 "negative regulation of
            angiogenesis" evidence=ISO] [GO:0030324 "lung development"
            evidence=IMP] [GO:0030878 "thyroid gland development" evidence=IMP]
            [GO:0033599 "regulation of mammary gland epithelial cell
            proliferation" evidence=IMP] [GO:0035264 "multicellular organism
            growth" evidence=IMP] [GO:0043065 "positive regulation of apoptotic
            process" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
            differentiation" evidence=ISO] [GO:0045647 "negative regulation of
            erythrocyte differentiation" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO;IDA] [GO:0048286 "lung alveolus development"
            evidence=IMP] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IMP] [GO:0048706 "embryonic skeletal system development"
            evidence=IGI] [GO:0060435 "bronchiole development" evidence=IMP]
            [GO:0060439 "trachea morphogenesis" evidence=IMP] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IMP] [GO:0060480 "lung goblet cell differentiation"
            evidence=IMP] [GO:0060481 "lobar bronchus epithelium development"
            evidence=IMP] [GO:0060484 "lung-associated mesenchyme development"
            evidence=IMP] [GO:0060535 "trachea cartilage morphogenesis"
            evidence=IMP] [GO:0060536 "cartilage morphogenesis" evidence=IMP]
            [GO:0060574 "intestinal epithelial cell maturation" evidence=IMP]
            [GO:0060638 "mesenchymal-epithelial cell signaling" evidence=IMP]
            [GO:0060644 "mammary gland epithelial cell differentiation"
            evidence=IMP] [GO:0060749 "mammary gland alveolus development"
            evidence=IMP] [GO:0060764 "cell-cell signaling involved in mammary
            gland development" evidence=IMP] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96177
            GO:GO:0005634 GO:GO:0016477 GO:GO:0009952 GO:GO:0003677
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
            GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
            GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
            GO:GO:0010870 GeneTree:ENSGT00700000104189 GO:GO:0045639
            GO:GO:0045647 GO:GO:0060574 HOVERGEN:HBG016849 eggNOG:NOG236516
            HOGENOM:HOG000231178 OMA:YRDSASM OrthoDB:EOG49S677 CTD:3202
            KO:K09305 GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
            GO:GO:0060535 EMBL:M36604 EMBL:Y00208 EMBL:X16840 EMBL:M28021
            EMBL:BC011063 IPI:IPI00132371 PIR:S07812 RefSeq:NP_034583.1
            UniGene:Mm.173 ProteinModelPortal:P09021 SMR:P09021 IntAct:P09021
            STRING:P09021 PhosphoSite:P09021 PaxDb:P09021 PRIDE:P09021
            Ensembl:ENSMUST00000048794 GeneID:15402 KEGG:mmu:15402
            UCSC:uc009byh.1 InParanoid:P09021 NextBio:288102 Bgee:P09021
            CleanEx:MM_HOXA5 Genevestigator:P09021
            GermOnline:ENSMUSG00000038253 Uniprot:P09021
        Length = 270

 Score = 159 (61.0 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 35/63 (55%), Positives = 44/63 (69%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK + 
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 255

Query:    77 QKN 79
              K+
Sbjct:   256 LKS 258


>RGD|6492497 [details] [associations]
            symbol:LOC100911546 "homeobox protein Hox-A5-like" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:620609 RGD:6492497 RGD:6502805
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104189 OMA:YRDSASM CTD:3202 KO:K09305
            UniGene:Rn.8465 EMBL:CH474011 EMBL:AC122669 RefSeq:XP_003749797.1
            RefSeq:XP_003749803.1 RefSeq:XP_003752228.1 RefSeq:XP_003753945.1
            SMR:G3V6T2 Ensembl:ENSRNOT00000008523 GeneID:100909641
            GeneID:100911546 GeneID:79241 KEGG:rno:100909641 KEGG:rno:100911546
            KEGG:rno:79241 Uniprot:G3V6T2
        Length = 270

 Score = 159 (61.0 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 35/63 (55%), Positives = 44/63 (69%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK + 
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 255

Query:    77 QKN 79
              K+
Sbjct:   256 LKS 258


>RGD|6502805 [details] [associations]
            symbol:LOC100909641 "homeobox protein Hox-A5-like" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:620609 RGD:6492497 RGD:6502805
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104189 OMA:YRDSASM CTD:3202 KO:K09305
            UniGene:Rn.8465 EMBL:CH474011 EMBL:AC122669 RefSeq:XP_003749797.1
            RefSeq:XP_003749803.1 RefSeq:XP_003752228.1 RefSeq:XP_003753945.1
            SMR:G3V6T2 Ensembl:ENSRNOT00000008523 GeneID:100909641
            GeneID:100911546 GeneID:79241 KEGG:rno:100909641 KEGG:rno:100911546
            KEGG:rno:79241 Uniprot:G3V6T2
        Length = 270

 Score = 159 (61.0 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 35/63 (55%), Positives = 44/63 (69%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RTA++  Q   L+ EF  NRYLT RRR E+A+ L L+E QIKIWFQN+R K KK + 
Sbjct:   196 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 255

Query:    77 QKN 79
              K+
Sbjct:   256 LKS 258


>UNIPROTKB|E2R5E5 [details] [associations]
            symbol:DLX2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216
            "cartilage development" evidence=IEA] [GO:0048755 "branching
            morphogenesis of a nerve" evidence=IEA] [GO:0048715 "negative
            regulation of oligodendrocyte differentiation" evidence=IEA]
            [GO:0048701 "embryonic cranial skeleton morphogenesis"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=IEA]
            [GO:0021893 "cerebral cortex GABAergic interneuron fate commitment"
            evidence=IEA] [GO:0021882 "regulation of transcription from RNA
            polymerase II promoter involved in forebrain neuron fate
            commitment" evidence=IEA] [GO:0021772 "olfactory bulb development"
            evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
            [GO:0009954 "proximal/distal pattern formation" evidence=IEA]
            [GO:0003727 "single-stranded RNA binding" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0021766
            GO:GO:0003727 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0051216 GO:GO:0042475 GO:GO:0009954
            GO:GO:0000976 GO:GO:0048701 GO:GO:0048715 GO:GO:0021772
            GeneTree:ENSGT00700000104439 GO:GO:0021893 GO:GO:0021882
            InterPro:IPR022135 Pfam:PF12413 KO:K09315 OMA:SAFLGNY GO:GO:0048755
            EMBL:AAEX03017757 RefSeq:XP_003640223.1 Ensembl:ENSCAFT00000036269
            GeneID:100856541 KEGG:cfa:100856541 NextBio:20893482 Uniprot:E2R5E5
        Length = 334

 Score = 162 (62.1 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 34/69 (49%), Positives = 46/69 (66%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             RI +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA  LGL + Q+KIWF
Sbjct:   147 RIVNGKPK--KVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWF 204

Query:    65 QNKRAKIKK 73
             QN+R+K KK
Sbjct:   205 QNRRSKFKK 213


>UNIPROTKB|A2VDN3 [details] [associations]
            symbol:DLX3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0001890 "placenta
            development" evidence=IEA] [GO:0001568 "blood vessel development"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0001890 GO:GO:0001568 GO:GO:0000976
            GeneTree:ENSGT00700000104439 HOVERGEN:HBG005493
            HOGENOM:HOG000231940 InterPro:IPR022135 Pfam:PF12413 KO:K09315
            CTD:1747 eggNOG:NOG299102 OrthoDB:EOG42Z4QW EMBL:DAAA02049043
            EMBL:BC133325 IPI:IPI00695182 RefSeq:NP_001075091.1
            UniGene:Bt.23480 SMR:A2VDN3 STRING:A2VDN3
            Ensembl:ENSBTAT00000023142 GeneID:784366 KEGG:bta:784366
            InParanoid:A2VDN3 NextBio:20926651 Uniprot:A2VDN3
        Length = 287

 Score = 160 (61.4 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 33/69 (47%), Positives = 47/69 (68%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             R+ +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA +LGL + Q+KIWF
Sbjct:   120 RMVNGKPK--KVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWF 177

Query:    65 QNKRAKIKK 73
             QN+R+K KK
Sbjct:   178 QNRRSKFKK 186


>UNIPROTKB|E2RRW2 [details] [associations]
            symbol:DLX3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0001890
            "placenta development" evidence=IEA] [GO:0001568 "blood vessel
            development" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0001890 GO:GO:0001568 GO:GO:0000976
            GeneTree:ENSGT00700000104439 InterPro:IPR022135 Pfam:PF12413
            KO:K09315 CTD:1747 OMA:SWYHTQN EMBL:AAEX03006532 RefSeq:XP_548193.2
            ProteinModelPortal:E2RRW2 Ensembl:ENSCAFT00000026875 GeneID:491073
            KEGG:cfa:491073 NextBio:20863968 Uniprot:E2RRW2
        Length = 287

 Score = 160 (61.4 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 33/69 (47%), Positives = 47/69 (68%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             R+ +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA +LGL + Q+KIWF
Sbjct:   120 RMVNGKPK--KVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWF 177

Query:    65 QNKRAKIKK 73
             QN+R+K KK
Sbjct:   178 QNRRSKFKK 186


>UNIPROTKB|O60479 [details] [associations]
            symbol:DLX3 "Homeobox protein DLX-3" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
            [GO:0001890 "placenta development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 EMBL:CH471109 GO:GO:0001890 GO:GO:0001568
            GO:GO:0000976 HOVERGEN:HBG005493 HOGENOM:HOG000231940
            InterPro:IPR022135 Pfam:PF12413 KO:K09315 EMBL:AF028233
            EMBL:AF452638 EMBL:AK075167 EMBL:BC012361 EMBL:BC028970
            IPI:IPI00029716 RefSeq:NP_005211.1 UniGene:Hs.134194
            ProteinModelPortal:O60479 SMR:O60479 IntAct:O60479 STRING:O60479
            PhosphoSite:O60479 PRIDE:O60479 DNASU:1747 Ensembl:ENST00000434704
            GeneID:1747 KEGG:hsa:1747 UCSC:uc002ipy.3 CTD:1747
            GeneCards:GC17M048067 HGNC:HGNC:2916 HPA:HPA031164 MIM:104510
            MIM:190320 MIM:600525 neXtProt:NX_O60479 Orphanet:100034
            Orphanet:3352 PharmGKB:PA27371 eggNOG:NOG299102 InParanoid:O60479
            OMA:SWYHTQN OrthoDB:EOG42Z4QW PhylomeDB:O60479 GenomeRNAi:1747
            NextBio:7087 ArrayExpress:O60479 Bgee:O60479 CleanEx:HS_DLX3
            Genevestigator:O60479 GermOnline:ENSG00000064195 Uniprot:O60479
        Length = 287

 Score = 160 (61.4 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 33/69 (47%), Positives = 47/69 (68%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             R+ +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA +LGL + Q+KIWF
Sbjct:   120 RMVNGKPK--KVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWF 177

Query:    65 QNKRAKIKK 73
             QN+R+K KK
Sbjct:   178 QNRRSKFKK 186


>MGI|MGI:94903 [details] [associations]
            symbol:Dlx3 "distal-less homeobox 3" species:10090 "Mus
            musculus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IDA] [GO:0001568 "blood
            vessel development" evidence=IMP] [GO:0001890 "placenta
            development" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0042475 "odontogenesis of dentin-containing tooth"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0071895 "odontoblast differentiation"
            evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:94903
            GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001890 GO:GO:0001568
            GO:GO:0000976 HOVERGEN:HBG005493 HOGENOM:HOG000231940
            InterPro:IPR022135 Pfam:PF12413 KO:K09315 CTD:1747 eggNOG:NOG299102
            OMA:SWYHTQN OrthoDB:EOG42Z4QW EMBL:S81932 EMBL:BC058852
            IPI:IPI00132068 RefSeq:NP_034185.1 UniGene:Mm.5194
            ProteinModelPortal:Q64205 SMR:Q64205 STRING:Q64205
            PhosphoSite:Q64205 PRIDE:Q64205 Ensembl:ENSMUST00000092768
            GeneID:13393 KEGG:mmu:13393 InParanoid:Q64205 NextBio:283764
            Bgee:Q64205 CleanEx:MM_DLX3 Genevestigator:Q64205
            GermOnline:ENSMUSG00000001510 Uniprot:Q64205
        Length = 287

 Score = 160 (61.4 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 33/69 (47%), Positives = 47/69 (68%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             R+ +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA +LGL + Q+KIWF
Sbjct:   120 RMVNGKPK--KVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWF 177

Query:    65 QNKRAKIKK 73
             QN+R+K KK
Sbjct:   178 QNRRSKFKK 186


>RGD|1304875 [details] [associations]
            symbol:Dlx3 "distal-less homeobox 3" species:10116 "Rattus
            norvegicus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=ISO] [GO:0001568 "blood
            vessel development" evidence=IEA;ISO] [GO:0001890 "placenta
            development" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
            evidence=ISO] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;ISO] [GO:0042475 "odontogenesis of dentin-containing
            tooth" evidence=ISO] [GO:0071895 "odontoblast differentiation"
            evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:1304875
            GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001890 GO:GO:0001568
            GO:GO:0000976 EMBL:CH473948 GeneTree:ENSGT00700000104439
            InterPro:IPR022135 Pfam:PF12413 KO:K09315 CTD:1747 OMA:SWYHTQN
            OrthoDB:EOG42Z4QW IPI:IPI00208070 RefSeq:NP_001099302.1
            UniGene:Rn.104800 Ensembl:ENSRNOT00000005797 GeneID:287638
            KEGG:rno:287638 UCSC:RGD:1304875 NextBio:626687 Uniprot:D4ADD0
        Length = 287

 Score = 160 (61.4 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 33/69 (47%), Positives = 47/69 (68%)

Query:     5 RIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWF 64
             R+ +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA +LGL + Q+KIWF
Sbjct:   120 RMVNGKPK--KVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWF 177

Query:    65 QNKRAKIKK 73
             QN+R+K KK
Sbjct:   178 QNRRSKFKK 186


>ZFIN|ZDB-GENE-040415-1 [details] [associations]
            symbol:mnx2a "motor neuron and pancreas homeobox 2a"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 ZFIN:ZDB-GENE-040415-1 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 eggNOG:NOG322049 HOVERGEN:HBG051910 HSSP:P14653
            EMBL:AY445045 IPI:IPI00497108 UniGene:Dr.91916
            ProteinModelPortal:Q6SYZ0 SMR:Q6SYZ0 InParanoid:Q6SYZ0
            NextBio:20817872 Uniprot:Q6SYZ0
        Length = 309

 Score = 161 (61.7 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 35/75 (46%), Positives = 48/75 (64%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             K +RPRTAF+ +QL  L+ +F  N+YL+  +R E+A  L L E Q+KIWFQN+R K K++
Sbjct:   149 KCRRPRTAFTSQQLLELENQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRS 208

Query:    75 SGQKNPLALQLMAQG 89
                K   A QL   G
Sbjct:   209 RKAKEQAA-QLETDG 222


>UNIPROTKB|P46692 [details] [associations]
            symbol:CHOX-CAD1 "Homeobox protein CHOX-CAD" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
            PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            UniGene:Gga.210 HOVERGEN:HBG005302 EMBL:X57760 EMBL:X57761
            IPI:IPI00582961 PIR:S16417 ProteinModelPortal:P46692 SMR:P46692
            STRING:P46692 InParanoid:P46692 Uniprot:P46692
        Length = 248

 Score = 157 (60.3 bits), Expect = 1.8e-11, P = 1.8e-11
 Identities = 35/71 (49%), Positives = 48/71 (67%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SGK  R+K+K  R  ++  Q   L+ EF  +RY+T RR+ ELA  LGL E Q+KIWFQN+
Sbjct:   131 SGKT-RTKDKY-RVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNR 188

Query:    68 RAKIKKASGQK 78
             RAK +K + +K
Sbjct:   189 RAKERKVNKKK 199


>UNIPROTKB|J3KR92 [details] [associations]
            symbol:DLX6 "Homeobox protein DLX-6" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
            evidence=IEA] [GO:0030855 "epithelial cell differentiation"
            evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
            [GO:0048646 "anatomical structure formation involved in
            morphogenesis" evidence=IEA] [GO:0050679 "positive regulation of
            epithelial cell proliferation" evidence=IEA] [GO:0060021 "palate
            development" evidence=IEA] [GO:0060322 "head development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:CH471091 GO:GO:0000976 KO:K09314 EMBL:AC004774 OMA:SPYLPSY
            RefSeq:NP_005213.3 UniGene:Hs.249196 GeneID:1750 KEGG:hsa:1750
            CTD:1750 HGNC:HGNC:2919 ProteinModelPortal:J3KR92
            Ensembl:ENST00000518156 Uniprot:J3KR92
        Length = 293

 Score = 160 (61.4 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 36/74 (48%), Positives = 45/74 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:   161 NGKGK--KIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 218

Query:    68 RAKIKKASGQ-KNP 80
             R+K KK   Q  NP
Sbjct:   219 RSKFKKLLKQGSNP 232


>ZFIN|ZDB-GENE-990415-48 [details] [associations]
            symbol:dlx1a "distal-less homeobox gene 1a"
            species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000976 "transcription regulatory region sequence-specific DNA
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0051216 "cartilage
            development" evidence=IGI] [GO:0007275 "multicellular organismal
            development" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-990415-48 GO:GO:0005634 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0051216 GO:GO:0000976 eggNOG:NOG263092 EMBL:U67842
            EMBL:BC093139 IPI:IPI00485026 RefSeq:NP_571380.1 UniGene:Dr.128
            ProteinModelPortal:Q98875 SMR:Q98875 STRING:Q98875
            Ensembl:ENSDART00000019910 GeneID:30568 KEGG:dre:30568 CTD:30568
            GeneTree:ENSGT00700000104129 HOGENOM:HOG000231941
            HOVERGEN:HBG005493 InParanoid:Q98875 KO:K09314 OMA:MQQSQLM
            OrthoDB:EOG4M0F2M NextBio:20806939 ArrayExpress:Q98875 Bgee:Q98875
            Uniprot:Q98875
        Length = 252

 Score = 157 (60.3 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 34/70 (48%), Positives = 43/70 (61%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:   122 NGKGK--KIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 179

Query:    68 RAKIKKASGQ 77
             R+K KK   Q
Sbjct:   180 RSKFKKLMKQ 189


>UNIPROTKB|Q08DG7 [details] [associations]
            symbol:HOXA3 "Homeobox protein Hox-A3" species:9913 "Bos
            taurus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0060017
            "parathyroid gland development" evidence=IEA] [GO:0051216
            "cartilage development" evidence=IEA] [GO:0048704 "embryonic
            skeletal system morphogenesis" evidence=IEA] [GO:0048645 "organ
            formation" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IEA]
            [GO:0010159 "specification of organ position" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0001974 "blood vessel remodeling"
            evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0008284
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0001974 GO:GO:0051216 GO:GO:0048538 GO:GO:0048645
            GO:GO:0048704 GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
            GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
            HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
            InterPro:IPR025281 Pfam:PF13293 EMBL:BC123759 IPI:IPI00693889
            RefSeq:NP_001070293.1 UniGene:Bt.87350 ProteinModelPortal:Q08DG7
            SMR:Q08DG7 PRIDE:Q08DG7 Ensembl:ENSBTAT00000010700 GeneID:509991
            KEGG:bta:509991 CTD:3200 InParanoid:Q08DG7 NextBio:20869233
            GO:GO:0021615 Uniprot:Q08DG7
        Length = 442

 Score = 164 (62.8 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 36/69 (52%), Positives = 43/69 (62%)

Query:    13 RSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIK 72
             ++  KR RTA++  QL  L+ EF  NRYL   RR E+AN L L E QIKIWFQN+R K K
Sbjct:   188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247

Query:    73 KASGQKNPL 81
             K    K  L
Sbjct:   248 KDQKGKGML 256


>UNIPROTKB|J9NWE8 [details] [associations]
            symbol:HOXA3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
            InterPro:IPR025281 Pfam:PF13293 CTD:3200 EMBL:AAEX03009390
            RefSeq:XP_864544.1 Ensembl:ENSCAFT00000046660 GeneID:482368
            KEGG:cfa:482368 Uniprot:J9NWE8
        Length = 442

 Score = 164 (62.8 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 36/69 (52%), Positives = 43/69 (62%)

Query:    13 RSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIK 72
             ++  KR RTA++  QL  L+ EF  NRYL   RR E+AN L L E QIKIWFQN+R K K
Sbjct:   189 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 248

Query:    73 KASGQKNPL 81
             K    K  L
Sbjct:   249 KDQKGKGML 257


>UNIPROTKB|O43365 [details] [associations]
            symbol:HOXA3 "Homeobox protein Hox-A3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0010159 "specification of organ position"
            evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0048538 "thymus development" evidence=IEA] [GO:0048645 "organ
            formation" evidence=IEA] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IEA] [GO:0051216 "cartilage development"
            evidence=IEA] [GO:0060017 "parathyroid gland development"
            evidence=IEA] [GO:0071837 "HMG box domain binding" evidence=IEA]
            [GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0008284
            "positive regulation of cell proliferation" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEP] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0008284 EMBL:CH471073 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 GO:GO:0001525 EMBL:CH236948 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
            GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
            GO:GO:0010159 GO:GO:0060017 GO:GO:0030878 eggNOG:NOG284589
            EMBL:AC004079 HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
            OMA:HIQGSPV OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293
            CTD:3200 GO:GO:0021615 EMBL:BC015180 IPI:IPI00012050
            RefSeq:NP_109377.1 RefSeq:NP_705895.1 UniGene:Hs.659337
            ProteinModelPortal:O43365 SMR:O43365 STRING:O43365
            PhosphoSite:O43365 PaxDb:O43365 PRIDE:O43365 DNASU:3200
            Ensembl:ENST00000317201 Ensembl:ENST00000396352 GeneID:3200
            KEGG:hsa:3200 UCSC:uc003syk.3 GeneCards:GC07M027113 HGNC:HGNC:5104
            HPA:HPA029157 MIM:142954 neXtProt:NX_O43365 PharmGKB:PA29381
            InParanoid:O43365 PhylomeDB:O43365 GenomeRNAi:3200 NextBio:12728
            ArrayExpress:O43365 Bgee:O43365 CleanEx:HS_HOXA3
            Genevestigator:O43365 GermOnline:ENSG00000105997 Uniprot:O43365
        Length = 443

 Score = 164 (62.8 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 36/69 (52%), Positives = 43/69 (62%)

Query:    13 RSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIK 72
             ++  KR RTA++  QL  L+ EF  NRYL   RR E+AN L L E QIKIWFQN+R K K
Sbjct:   188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247

Query:    73 KASGQKNPL 81
             K    K  L
Sbjct:   248 KDQKGKGML 256


>UNIPROTKB|F1SHT1 [details] [associations]
            symbol:HOXA3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
            domain binding" evidence=IEA] [GO:0060017 "parathyroid gland
            development" evidence=IEA] [GO:0051216 "cartilage development"
            evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
            evidence=IEA] [GO:0048645 "organ formation" evidence=IEA]
            [GO:0048538 "thymus development" evidence=IEA] [GO:0030878 "thyroid
            gland development" evidence=IEA] [GO:0021615 "glossopharyngeal
            nerve morphogenesis" evidence=IEA] [GO:0010159 "specification of
            organ position" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0008284 "positive
            regulation of cell proliferation" evidence=IEA] [GO:0001974 "blood
            vessel remodeling" evidence=IEA] [GO:0001525 "angiogenesis"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001356
            InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0008284
            GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
            GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
            GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
            GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
            InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615
            EMBL:CU570959 RefSeq:XP_003134890.1 Ensembl:ENSSSCT00000018186
            GeneID:100519809 KEGG:ssc:100519809 Uniprot:F1SHT1
        Length = 443

 Score = 164 (62.8 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 36/69 (52%), Positives = 43/69 (62%)

Query:    13 RSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIK 72
             ++  KR RTA++  QL  L+ EF  NRYL   RR E+AN L L E QIKIWFQN+R K K
Sbjct:   188 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 247

Query:    73 KASGQKNPL 81
             K    K  L
Sbjct:   248 KDQKGKGML 256


>MGI|MGI:96175 [details] [associations]
            symbol:Hoxa3 "homeobox A3" species:10090 "Mus musculus"
            [GO:0001974 "blood vessel remodeling" evidence=IMP] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IMP] [GO:0009887 "organ morphogenesis"
            evidence=IMP] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IGI] [GO:0010159 "specification of organ
            position" evidence=IGI] [GO:0021615 "glossopharyngeal nerve
            morphogenesis" evidence=IGI;IMP] [GO:0030878 "thyroid gland
            development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IGI;IMP] [GO:0048645 "organ formation" evidence=IMP]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
            [GO:0048706 "embryonic skeletal system development" evidence=IGI]
            [GO:0051216 "cartilage development" evidence=IGI] [GO:0060017
            "parathyroid gland development" evidence=IGI] [GO:0071837 "HMG box
            domain binding" evidence=IPI] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96175
            GO:GO:0005634 GO:GO:0009952 GO:GO:0008284 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
            GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
            GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
            GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
            HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
            InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615 EMBL:Y11717
            EMBL:BC096612 EMBL:U56399 EMBL:K02591 IPI:IPI00113737 PIR:I49746
            RefSeq:NP_034582.1 UniGene:Mm.159945 UniGene:Mm.483277
            ProteinModelPortal:P02831 SMR:P02831 STRING:P02831
            PhosphoSite:P02831 PRIDE:P02831 Ensembl:ENSMUST00000114434
            GeneID:15400 KEGG:mmu:15400 UCSC:uc009bya.2 InParanoid:P02831
            NextBio:288094 Bgee:P02831 CleanEx:MM_HOXA3 Genevestigator:P02831
            GermOnline:ENSMUSG00000059723 Uniprot:P02831
        Length = 443

 Score = 164 (62.8 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 36/69 (52%), Positives = 43/69 (62%)

Query:    13 RSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIK 72
             ++  KR RTA++  QL  L+ EF  NRYL   RR E+AN L L E QIKIWFQN+R K K
Sbjct:   189 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 248

Query:    73 KASGQKNPL 81
             K    K  L
Sbjct:   249 KDQKGKGML 257


>RGD|1561431 [details] [associations]
            symbol:Hoxa3 "homeobox A3" species:10116 "Rattus norvegicus"
            [GO:0001525 "angiogenesis" evidence=ISO] [GO:0001974 "blood vessel
            remodeling" evidence=ISO] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISO] [GO:0009887 "organ morphogenesis"
            evidence=ISO] [GO:0009952 "anterior/posterior pattern
            specification" evidence=ISO] [GO:0010159 "specification of organ
            position" evidence=ISO] [GO:0021615 "glossopharyngeal nerve
            morphogenesis" evidence=ISO] [GO:0030878 "thyroid gland
            development" evidence=ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0048538 "thymus development"
            evidence=ISO] [GO:0048645 "organ formation" evidence=ISO]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
            [GO:0048706 "embryonic skeletal system development" evidence=ISO]
            [GO:0051216 "cartilage development" evidence=ISO] [GO:0060017
            "parathyroid gland development" evidence=ISO] [GO:0071837 "HMG box
            domain binding" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 RGD:1561431 GO:GO:0005634
            GO:GO:0009952 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
            GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0001974 GO:GO:0051216 GO:GO:0048538
            GO:GO:0048645 GO:GO:0048704 GO:GO:0010159 GO:GO:0060017
            GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
            OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293 CTD:3200
            GO:GO:0021615 EMBL:CH474011 EMBL:AC122669 IPI:IPI00187912
            RefSeq:XP_001058923.1 RefSeq:XP_003749795.1 RefSeq:XP_003752226.1
            Ensembl:ENSRNOT00000008447 GeneID:100911474 GeneID:500125
            KEGG:rno:100911474 KEGG:rno:500125 UCSC:RGD:1561431 NextBio:705172
            Uniprot:D3ZM81
        Length = 444

 Score = 164 (62.8 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 36/69 (52%), Positives = 43/69 (62%)

Query:    13 RSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIK 72
             ++  KR RTA++  QL  L+ EF  NRYL   RR E+AN L L E QIKIWFQN+R K K
Sbjct:   189 QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 248

Query:    73 KASGQKNPL 81
             K    K  L
Sbjct:   249 KDQKGKGML 257


>UNIPROTKB|B7ZAD0 [details] [associations]
            symbol:HOXB3 "cDNA, FLJ79144, highly similar to Homeobox
            protein Hox-B3" species:9606 "Homo sapiens" [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0021546 "rhombomere development"
            evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
            evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
            "cartilage development" evidence=IEA] [GO:0060216 "definitive
            hemopoiesis" evidence=IEA] [GO:0060324 "face development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
            GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
            GO:GO:0030878 HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293
            GO:GO:0021615 EMBL:AC103702 UniGene:Hs.654560 HGNC:HGNC:5114
            ChiTaRS:HOXB3 GO:GO:0021546 EMBL:AK316245 IPI:IPI00947155
            SMR:B7ZAD0 STRING:B7ZAD0 Ensembl:ENST00000472863
            Ensembl:ENST00000489475 Uniprot:B7ZAD0
        Length = 358

 Score = 162 (62.1 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 34/57 (59%), Positives = 40/57 (70%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             KR RTA++  QL  L+ EF  NRYL   RR E+AN L L+E QIKIWFQN+R K KK
Sbjct:   116 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKK 172


>UNIPROTKB|A6H733 [details] [associations]
            symbol:DLX1 "DLX1 protein" species:9913 "Bos taurus"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0048715 "negative
            regulation of oligodendrocyte differentiation" evidence=IEA]
            [GO:0048706 "embryonic skeletal system development" evidence=IEA]
            [GO:0043524 "negative regulation of neuron apoptotic process"
            evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
            tooth" evidence=IEA] [GO:0021893 "cerebral cortex GABAergic
            interneuron fate commitment" evidence=IEA] [GO:0021882 "regulation
            of transcription from RNA polymerase II promoter involved in
            forebrain neuron fate commitment" evidence=IEA] [GO:0021766
            "hippocampus development" evidence=IEA] [GO:0009954
            "proximal/distal pattern formation" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0021766
            GO:GO:0043524 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0042475 GO:GO:0009954 GO:GO:0000976 GO:GO:0048706
            GO:GO:0048715 eggNOG:NOG263092 GeneTree:ENSGT00700000104129
            HOGENOM:HOG000231941 HOVERGEN:HBG005493 KO:K09314 OMA:MQQSQLM
            OrthoDB:EOG4M0F2M CTD:1745 GO:GO:0021893 GO:GO:0021882
            EMBL:DAAA02004227 EMBL:BC146096 IPI:IPI00704875
            RefSeq:NP_001092487.1 UniGene:Bt.87150 SMR:A6H733
            Ensembl:ENSBTAT00000020246 GeneID:521806 KEGG:bta:521806
            InParanoid:A6H733 NextBio:20873371 Uniprot:A6H733
        Length = 255

 Score = 157 (60.3 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 34/70 (48%), Positives = 43/70 (61%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:   122 NGKGK--KIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 179

Query:    68 RAKIKKASGQ 77
             R+K KK   Q
Sbjct:   180 RSKFKKLMKQ 189


>UNIPROTKB|E2RFM6 [details] [associations]
            symbol:DLX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048715
            "negative regulation of oligodendrocyte differentiation"
            evidence=IEA] [GO:0048706 "embryonic skeletal system development"
            evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
            process" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0021893 "cerebral cortex
            GABAergic interneuron fate commitment" evidence=IEA] [GO:0021882
            "regulation of transcription from RNA polymerase II promoter
            involved in forebrain neuron fate commitment" evidence=IEA]
            [GO:0021766 "hippocampus development" evidence=IEA] [GO:0009954
            "proximal/distal pattern formation" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0021766
            GO:GO:0043524 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0042475 GO:GO:0009954 GO:GO:0000976 GO:GO:0048706
            GO:GO:0048715 GeneTree:ENSGT00700000104129 KO:K09314 OMA:MQQSQLM
            CTD:1745 GO:GO:0021893 GO:GO:0021882 EMBL:AAEX03017756
            RefSeq:XP_860852.1 ProteinModelPortal:E2RFM6
            Ensembl:ENSCAFT00000020533 GeneID:607766 KEGG:cfa:607766
            NextBio:20893470 Uniprot:E2RFM6
        Length = 255

 Score = 157 (60.3 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 34/70 (48%), Positives = 43/70 (61%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:   122 NGKGK--KIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 179

Query:    68 RAKIKKASGQ 77
             R+K KK   Q
Sbjct:   180 RSKFKKLMKQ 189


>UNIPROTKB|P56177 [details] [associations]
            symbol:DLX1 "Homeobox protein DLX-1" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0009954 "proximal/distal
            pattern formation" evidence=IEA] [GO:0021766 "hippocampus
            development" evidence=IEA] [GO:0021882 "regulation of transcription
            from RNA polymerase II promoter involved in forebrain neuron fate
            commitment" evidence=IEA] [GO:0021893 "cerebral cortex GABAergic
            interneuron fate commitment" evidence=IEA] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=IEA]
            [GO:0043524 "negative regulation of neuron apoptotic process"
            evidence=IEA] [GO:0048706 "embryonic skeletal system development"
            evidence=IEA] [GO:0048715 "negative regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0003677 "DNA binding" evidence=NAS] [GO:0007275 "multicellular
            organismal development" evidence=NAS] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0021766
            GO:GO:0003677 GO:GO:0043524 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 EMBL:CH471058 GO:GO:0042475
            Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0009954
            GO:GO:0000976 GO:GO:0048706 GO:GO:0048715 eggNOG:NOG263092
            HOGENOM:HOG000231941 HOVERGEN:HBG005493 KO:K09314 OMA:MQQSQLM
            OrthoDB:EOG4M0F2M EMBL:AY257976 EMBL:AC015976 EMBL:BC036189
            EMBL:BC053351 IPI:IPI00221129 IPI:IPI00644347 PIR:A53495
            RefSeq:NP_001033582.1 RefSeq:NP_835221.2 UniGene:Hs.407015
            ProteinModelPortal:P56177 SMR:P56177 STRING:P56177 DMDM:116241335
            PRIDE:P56177 DNASU:1745 Ensembl:ENST00000341900
            Ensembl:ENST00000361725 GeneID:1745 KEGG:hsa:1745 UCSC:uc002uhl.3
            CTD:1745 GeneCards:GC02P172949 HGNC:HGNC:2914 HPA:HPA045884
            MIM:600029 neXtProt:NX_P56177 PharmGKB:PA27369 InParanoid:P56177
            PhylomeDB:P56177 GenomeRNAi:1745 NextBio:7077 ArrayExpress:P56177
            Bgee:P56177 CleanEx:HS_DLX1 Genevestigator:P56177
            GermOnline:ENSG00000144355 GO:GO:0021893 GO:GO:0021882
            Uniprot:P56177
        Length = 255

 Score = 157 (60.3 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 34/70 (48%), Positives = 43/70 (61%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:   122 NGKGK--KIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 179

Query:    68 RAKIKKASGQ 77
             R+K KK   Q
Sbjct:   180 RSKFKKLMKQ 189


>UNIPROTKB|F1S083 [details] [associations]
            symbol:DLX1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048715 "negative
            regulation of oligodendrocyte differentiation" evidence=IEA]
            [GO:0048706 "embryonic skeletal system development" evidence=IEA]
            [GO:0043524 "negative regulation of neuron apoptotic process"
            evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
            tooth" evidence=IEA] [GO:0021893 "cerebral cortex GABAergic
            interneuron fate commitment" evidence=IEA] [GO:0021882 "regulation
            of transcription from RNA polymerase II promoter involved in
            forebrain neuron fate commitment" evidence=IEA] [GO:0021766
            "hippocampus development" evidence=IEA] [GO:0009954
            "proximal/distal pattern formation" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0021766
            GO:GO:0043524 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0042475 GO:GO:0009954 GO:GO:0000976 GO:GO:0048706
            GO:GO:0048715 GeneTree:ENSGT00700000104129 KO:K09314 OMA:MQQSQLM
            GO:GO:0021893 GO:GO:0021882 EMBL:CU915442 RefSeq:XP_003133523.1
            Ensembl:ENSSSCT00000017370 GeneID:100522648 KEGG:ssc:100522648
            Uniprot:F1S083
        Length = 255

 Score = 157 (60.3 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 34/70 (48%), Positives = 43/70 (61%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:   122 NGKGK--KIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 179

Query:    68 RAKIKKASGQ 77
             R+K KK   Q
Sbjct:   180 RSKFKKLMKQ 189


>MGI|MGI:94901 [details] [associations]
            symbol:Dlx1 "distal-less homeobox 1" species:10090 "Mus
            musculus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=IGI] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
            "chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0009954
            "proximal/distal pattern formation" evidence=IGI;IMP] [GO:0021766
            "hippocampus development" evidence=IGI] [GO:0021879 "forebrain
            neuron differentiation" evidence=IGI] [GO:0021882 "regulation of
            transcription from RNA polymerase II promoter involved in forebrain
            neuron fate commitment" evidence=IGI] [GO:0021892 "cerebral cortex
            GABAergic interneuron differentiation" evidence=IGI] [GO:0021893
            "cerebral cortex GABAergic interneuron fate commitment"
            evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
            [GO:0042475 "odontogenesis of dentin-containing tooth"
            evidence=IGI] [GO:0043524 "negative regulation of neuron apoptotic
            process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048706 "embryonic skeletal system development"
            evidence=IGI;IMP] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=IGI] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 MGI:MGI:94901 GO:GO:0005634 GO:GO:0021766
            GO:GO:0003677 GO:GO:0043524 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000122 GO:GO:0042475 GO:GO:0009954 GO:GO:0000976
            GO:GO:0048706 GO:GO:0048715 eggNOG:NOG263092
            GeneTree:ENSGT00700000104129 HOGENOM:HOG000231941
            HOVERGEN:HBG005493 KO:K09314 OMA:MQQSQLM OrthoDB:EOG4M0F2M CTD:1745
            GO:GO:0021893 GO:GO:0021882 EMBL:U51001 EMBL:U51000 EMBL:BC079609
            EMBL:X57552 IPI:IPI00133259 RefSeq:NP_034183.1 UniGene:Mm.4543
            UniGene:Mm.475101 ProteinModelPortal:Q64317 SMR:Q64317
            STRING:Q64317 PRIDE:Q64317 Ensembl:ENSMUST00000037119 GeneID:13390
            KEGG:mmu:13390 InParanoid:Q64317 NextBio:283756 Bgee:Q64317
            CleanEx:MM_DLX1 Genevestigator:Q64317 GermOnline:ENSMUSG00000041911
            Uniprot:Q64317
        Length = 255

 Score = 157 (60.3 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 34/70 (48%), Positives = 43/70 (61%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:   122 NGKGK--KIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 179

Query:    68 RAKIKKASGQ 77
             R+K KK   Q
Sbjct:   180 RSKFKKLMKQ 189


>UNIPROTKB|E1BRX3 [details] [associations]
            symbol:EMX1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IEA] [GO:0021796 "cerebral
            cortex regionalization" evidence=IEA] [GO:0030182 "neuron
            differentiation" evidence=IEA] [GO:0042493 "response to drug"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0042493 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00680000099625 OMA:NHHINRW EMBL:AADN02049020
            IPI:IPI00586440 Ensembl:ENSGALT00000025935 Uniprot:E1BRX3
        Length = 235

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 30/59 (50%), Positives = 41/59 (69%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             K KR RTAFS  QL RL+  F +N Y+    R++LA+ L L+E Q+K+WFQN+R K K+
Sbjct:   136 KPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLASSLSLSETQVKVWFQNRRTKYKR 194


>UNIPROTKB|J9P485 [details] [associations]
            symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
            EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
        Length = 134

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 30/59 (50%), Positives = 40/59 (67%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             K KR RTAFS  QL RL+  F +N Y+    R++LA+ L L E Q+K+WFQN+R K K+
Sbjct:    35 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKR 93


>UNIPROTKB|F8VXG1 [details] [associations]
            symbol:DLX3 "Homeobox protein DLX-3" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
            [GO:0001890 "placenta development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0001890 GO:GO:0001568 GO:GO:0000976
            HGNC:HGNC:2916 EMBL:AC009720 IPI:IPI01021511
            ProteinModelPortal:F8VXG1 SMR:F8VXG1 Ensembl:ENST00000512495
            ArrayExpress:F8VXG1 Bgee:F8VXG1 Uniprot:F8VXG1
        Length = 167

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 32/66 (48%), Positives = 45/66 (68%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL+ L+  F + +YL    R ELA +LGL + Q+KIWFQN+
Sbjct:     3 NGKPK--KVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNR 60

Query:    68 RAKIKK 73
             R+K KK
Sbjct:    61 RSKFKK 66


>UNIPROTKB|F8VXJ2 [details] [associations]
            symbol:DLX1 "Homeobox protein DLX-1" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0009954 "proximal/distal
            pattern formation" evidence=IEA] [GO:0021766 "hippocampus
            development" evidence=IEA] [GO:0021882 "regulation of transcription
            from RNA polymerase II promoter involved in forebrain neuron fate
            commitment" evidence=IEA] [GO:0021893 "cerebral cortex GABAergic
            interneuron fate commitment" evidence=IEA] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=IEA]
            [GO:0043524 "negative regulation of neuron apoptotic process"
            evidence=IEA] [GO:0048706 "embryonic skeletal system development"
            evidence=IEA] [GO:0048715 "negative regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0021766
            GO:GO:0043524 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0042475 GO:GO:0009954 GO:GO:0000976 GO:GO:0048706
            GO:GO:0048715 EMBL:AC015976 HGNC:HGNC:2914 GO:GO:0021893
            GO:GO:0021882 IPI:IPI01022976 ProteinModelPortal:F8VXJ2 SMR:F8VXJ2
            Ensembl:ENST00000469444 ArrayExpress:F8VXJ2 Bgee:F8VXJ2
            Uniprot:F8VXJ2
        Length = 187

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 33/66 (50%), Positives = 42/66 (63%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R ELA  LGL + Q+KIWFQNK
Sbjct:   122 NGKGK--KIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNK 179

Query:    68 RAKIKK 73
             R+K KK
Sbjct:   180 RSKFKK 185


>WB|WBGene00000442 [details] [associations]
            symbol:ceh-19 species:6239 "Caenorhabditis elegans"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104206 EMBL:Z11794 EMBL:Z11795 EMBL:FO080909
            PIR:S26301 PIR:T16113 RefSeq:NP_001023141.1 RefSeq:NP_001023142.1
            ProteinModelPortal:P26797 SMR:P26797 EnsemblMetazoa:F20D12.6b
            GeneID:177590 KEGG:cel:CELE_F20D12.6 UCSC:F20D12.6a CTD:177590
            WormBase:F20D12.6a WormBase:F20D12.6b eggNOG:NOG279638
            InParanoid:P26797 OMA:SARKHDY NextBio:897488 Uniprot:P26797
        Length = 199

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 32/66 (48%), Positives = 44/66 (66%)

Query:    12 KRSK----EKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             KRS+    E++PR A+S  QL RL+ EF  ++YL+  +R +L+  L L E QIK WFQN+
Sbjct:    86 KRSRKSVCERKPRQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIKTWFQNR 145

Query:    68 RAKIKK 73
             R K KK
Sbjct:   146 RTKWKK 151


>ZFIN|ZDB-GENE-990415-113 [details] [associations]
            symbol:hoxc6a "homeo box C6a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-113
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HOGENOM:HOG000231181 GeneTree:ENSGT00700000104090
            HOVERGEN:HBG016849 KO:K09306 EMBL:AF071265 EMBL:BC083307
            EMBL:DQ060554 EMBL:X17266 EMBL:Y14546 IPI:IPI00494357 PIR:S08639
            RefSeq:NP_571198.1 UniGene:Dr.132203 ProteinModelPortal:P15862
            SMR:P15862 Ensembl:ENSDART00000103136 GeneID:30346 KEGG:dre:30346
            CTD:30346 eggNOG:NOG266030 InParanoid:P15862 OMA:MNSYFAN
            OrthoDB:EOG41NTMZ NextBio:20806776 ArrayExpress:P15862 Bgee:P15862
            Uniprot:P15862
        Length = 231

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 36/66 (54%), Positives = 41/66 (62%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SG    S  +R R  +S  Q   L+ EF  NRYLT RRR E+AN L L E QIKIWFQN+
Sbjct:   134 SGVGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNR 193

Query:    68 RAKIKK 73
             R K KK
Sbjct:   194 RMKWKK 199


>UNIPROTKB|O93353 [details] [associations]
            symbol:HOXA3 "Homeobox protein Hox-A3" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001525
            "angiogenesis" evidence=IEA] [GO:0001974 "blood vessel remodeling"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA] [GO:0010159 "specification of
            organ position" evidence=IEA] [GO:0021615 "glossopharyngeal nerve
            morphogenesis" evidence=IEA] [GO:0030878 "thyroid gland
            development" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0048645 "organ formation" evidence=IEA]
            [GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
            [GO:0051216 "cartilage development" evidence=IEA] [GO:0060017
            "parathyroid gland development" evidence=IEA] [GO:0071837 "HMG box
            domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
            HOVERGEN:HBG107984 KO:K09303 OrthoDB:EOG4K6G4J InterPro:IPR025281
            Pfam:PF13293 CTD:3200 EMBL:AF067959 EMBL:AB111110 IPI:IPI00571086
            RefSeq:NP_989879.1 RefSeq:XP_003640749.1 UniGene:Gga.48467
            UniGene:Gga.49158 ProteinModelPortal:O93353 SMR:O93353
            Ensembl:ENSGALT00000018005 GeneID:100858480 GeneID:395231
            KEGG:gga:100858480 KEGG:gga:395231 InParanoid:O93353
            NextBio:20815320 Uniprot:O93353
        Length = 413

 Score = 163 (62.4 bits), Expect = 2.3e-11, P = 2.3e-11
 Identities = 34/61 (55%), Positives = 41/61 (67%)

Query:    13 RSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIK 72
             ++  KR RTA++  QL  L+ EF  NRYL   RR E+AN L L E QIKIWFQN+R K K
Sbjct:   170 QTSSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYK 229

Query:    73 K 73
             K
Sbjct:   230 K 230


>UNIPROTKB|E1BT91 [details] [associations]
            symbol:LOC100858961 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0021542 "dentate gyrus development" evidence=IEA] [GO:0021796
            "cerebral cortex regionalization" evidence=IEA] [GO:0021846 "cell
            proliferation in forebrain" evidence=IEA] [GO:0021885 "forebrain
            cell migration" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
            [GO:0072001 "renal system development" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0042493
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GO:GO:0000976 KO:K09317
            GeneTree:ENSGT00680000099625 CTD:2018 OMA:QMNPFLN EMBL:AADN02030958
            IPI:IPI00600145 RefSeq:XP_421783.2 UniGene:Gga.50588
            Ensembl:ENSGALT00000015139 GeneID:423923 KEGG:gga:423923
            NextBio:20826319 Uniprot:E1BT91
        Length = 247

 Score = 156 (60.0 bits), Expect = 2.3e-11, P = 2.3e-11
 Identities = 30/59 (50%), Positives = 40/59 (67%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             K KR RTAFS  QL RL+  F +N Y+    R++LA+ L L E Q+K+WFQN+R K K+
Sbjct:   148 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKR 206


>ZFIN|ZDB-GENE-990415-54 [details] [associations]
            symbol:emx2 "empty spiracles homeobox 2"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0007420 "brain
            development" evidence=IEP] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-990415-54 GO:GO:0005634 GO:GO:0007420 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 HSSP:P06602 GeneTree:ENSGT00680000099625
            HOVERGEN:HBG005024 OMA:QMNPFLN EMBL:AL929298 EMBL:D32215
            IPI:IPI00511425 PIR:I51737 UniGene:Dr.75105 STRING:Q90264
            Ensembl:ENSDART00000058036 InParanoid:Q90264 Uniprot:Q90264
        Length = 247

 Score = 156 (60.0 bits), Expect = 2.3e-11, P = 2.3e-11
 Identities = 30/59 (50%), Positives = 40/59 (67%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             K KR RTAFS  QL RL+  F +N Y+    R++LA+ L L E Q+K+WFQN+R K K+
Sbjct:   148 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKR 206


>ZFIN|ZDB-GENE-990415-104 [details] [associations]
            symbol:hoxb3a "homeo box B3a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-104
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 GeneTree:ENSGT00700000104189 eggNOG:NOG284589
            HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
            InterPro:IPR025281 Pfam:PF13293 EMBL:AJ537509 EMBL:AL645782
            EMBL:BC095559 EMBL:Y13944 EMBL:BK005081 EMBL:BK005082
            IPI:IPI00486662 RefSeq:NP_571192.2 UniGene:Dr.132502
            ProteinModelPortal:O42368 SMR:O42368 STRING:O42368
            Ensembl:ENSDART00000078466 GeneID:30339 KEGG:dre:30339 CTD:30339
            InParanoid:O42368 OMA:ATYYDNT OrthoDB:EOG4S4PH1 NextBio:20806770
            ArrayExpress:O42368 Bgee:O42368 Uniprot:O42368
        Length = 417

 Score = 163 (62.4 bits), Expect = 2.3e-11, P = 2.3e-11
 Identities = 35/62 (56%), Positives = 41/62 (66%)

Query:    17 KRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKASG 76
             KR RTA++  QL  L+ EF  NRYL   RR E+AN L L+E QIKIWFQN+R K KK   
Sbjct:   181 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK 240

Query:    77 QK 78
              K
Sbjct:   241 SK 242


>UNIPROTKB|Q9DEB6 [details] [associations]
            symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
            gallus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0060349 "bone
            morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
            GeneTree:ENSGT00530000063388 GO:GO:0000976 eggNOG:NOG291290
            KO:K09312 EMBL:AB046532 IPI:IPI00807211 RefSeq:NP_990007.2
            UniGene:Gga.210 ProteinModelPortal:Q9DEB6 SMR:Q9DEB6 STRING:Q9DEB6
            Ensembl:ENSGALT00000009108 GeneID:395397 KEGG:gga:395397 CTD:1044
            HOGENOM:HOG000115975 HOVERGEN:HBG005302 InParanoid:Q9DEB6
            OrthoDB:EOG42FSK7 NextBio:20815481 Uniprot:Q9DEB6
        Length = 260

 Score = 157 (60.3 bits), Expect = 2.4e-11, P = 2.4e-11
 Identities = 35/71 (49%), Positives = 48/71 (67%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SGK  R+K+K  R  ++  Q   L+ EF  +RY+T RR+ ELA  LGL E Q+KIWFQN+
Sbjct:   143 SGKT-RTKDKY-RVVYTDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNR 200

Query:    68 RAKIKKASGQK 78
             RAK +K + +K
Sbjct:   201 RAKERKVNKKK 211


>FB|FBgn0015561 [details] [associations]
            symbol:unpg "unplugged" species:7227 "Drosophila
            melanogaster" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0051960 "regulation of nervous
            system development" evidence=IMP] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0007420 "brain development"
            evidence=IMP] [GO:0007424 "open tracheal system development"
            evidence=TAS] [GO:0007426 "tracheal outgrowth, open tracheal
            system" evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 EMBL:AE013599 GO:GO:0005634 GO:GO:0007420
            GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0007426
            eggNOG:NOG315879 KO:K09321 GeneTree:ENSGT00660000095141 EMBL:U35427
            EMBL:BT022753 RefSeq:NP_477146.1 UniGene:Dm.6807
            ProteinModelPortal:Q4V5A3 SMR:Q4V5A3 STRING:Q4V5A3 PRIDE:Q4V5A3
            EnsemblMetazoa:FBtr0088586 GeneID:35942 KEGG:dme:Dmel_CG1650
            UCSC:CG1650-RA CTD:35942 FlyBase:FBgn0015561 InParanoid:Q4V5A3
            OMA:FAQNHER OrthoDB:EOG4H70T3 PhylomeDB:Q4V5A3 GenomeRNAi:35942
            NextBio:795976 Bgee:Q4V5A3 GO:GO:0051960 Uniprot:Q4V5A3
        Length = 485

 Score = 164 (62.8 bits), Expect = 2.4e-11, P = 2.4e-11
 Identities = 32/66 (48%), Positives = 44/66 (66%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +G    SK +R RTAF+ EQL  L+ EF   +YL+   R ++A  L L+E Q+KIWFQN+
Sbjct:   311 NGSSSNSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNR 370

Query:    68 RAKIKK 73
             RAK K+
Sbjct:   371 RAKWKR 376


>ZFIN|ZDB-GENE-980526-73 [details] [associations]
            symbol:dlx4a "distal-less homeobox gene 4a"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-73 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG263092
            GeneTree:ENSGT00700000104129 HOGENOM:HOG000231941
            HOVERGEN:HBG005493 KO:K09314 EMBL:U67846 EMBL:AL590145
            IPI:IPI00506576 RefSeq:NP_571375.1 UniGene:Dr.158
            ProteinModelPortal:Q98879 SMR:Q98879 Ensembl:ENSDART00000007073
            Ensembl:ENSDART00000133457 GeneID:30561 KEGG:dre:30561 CTD:30561
            InParanoid:Q98879 OMA:HYPVHGL OrthoDB:EOG42BX98 NextBio:20806936
            ArrayExpress:Q98879 Bgee:Q98879 Uniprot:Q98879
        Length = 250

 Score = 156 (60.0 bits), Expect = 2.5e-11, P = 2.5e-11
 Identities = 36/82 (43%), Positives = 47/82 (57%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK K  K ++PRT +S  QL  L   F + +YL    R +LA +LGL + Q+KIWFQNK
Sbjct:   117 NGKGK--KIRKPRTIYSSLQLQALNQRFQQTQYLALPERADLAAKLGLTQTQVKIWFQNK 174

Query:    68 RAKIKKAS--GQKNPLALQLMA 87
             R+K KK    G   P    L A
Sbjct:   175 RSKYKKIMKHGSSGPEGEHLQA 196


>UNIPROTKB|E1B7N3 [details] [associations]
            symbol:HOXD1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
            skeletal system development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09301 CTD:3231
            OMA:GDGAFVS EMBL:DAAA02004173 IPI:IPI00698903 RefSeq:XP_002685353.1
            UniGene:Bt.104076 Ensembl:ENSBTAT00000021043 GeneID:100295780
            KEGG:bta:100295780 Uniprot:E1B7N3
        Length = 322

 Score = 160 (61.4 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 32/54 (59%), Positives = 40/54 (74%)

Query:    20 RTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             RT FS +QL+ L+ EF  N+YLT  RR E+AN L LN+ Q+KIWFQN+R K KK
Sbjct:   227 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKK 280


>UNIPROTKB|Q04743 [details] [associations]
            symbol:EMX2 "Homeobox protein EMX2" species:9606 "Homo
            sapiens" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0021542 "dentate gyrus
            development" evidence=IEA] [GO:0021796 "cerebral cortex
            regionalization" evidence=IEA] [GO:0021846 "cell proliferation in
            forebrain" evidence=IEA] [GO:0021885 "forebrain cell migration"
            evidence=IEA] [GO:0030182 "neuron differentiation" evidence=IEA]
            [GO:0042493 "response to drug" evidence=IEA] [GO:0072001 "renal
            system development" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=NAS] [GO:0003677 "DNA binding"
            evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0005515
            "protein binding" evidence=IPI] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0030182
            GO:GO:0042493 GO:GO:0009952 GO:GO:0003677 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0000976 GO:GO:0021846 GO:GO:0021542 eggNOG:NOG264928
            KO:K09317 HOGENOM:HOG000247032 HOVERGEN:HBG005024 GO:GO:0021796
            CTD:2018 OMA:QMNPFLN OrthoDB:EOG4BP1CQ GO:GO:0021885 GO:GO:0072001
            EMBL:AF301598 EMBL:AL161811 EMBL:AK055041 EMBL:AC005871 EMBL:X68880
            IPI:IPI00029166 PIR:S22722 RefSeq:NP_001159396.1 RefSeq:NP_004089.1
            UniGene:Hs.202095 ProteinModelPortal:Q04743 SMR:Q04743
            IntAct:Q04743 STRING:Q04743 PhosphoSite:Q04743 DMDM:19862512
            PRIDE:Q04743 DNASU:2018 Ensembl:ENST00000369201
            Ensembl:ENST00000553456 GeneID:2018 KEGG:hsa:2018 UCSC:uc001ldh.4
            GeneCards:GC10P119291 HGNC:HGNC:3341 MIM:269160 MIM:600035
            neXtProt:NX_Q04743 Orphanet:799 PharmGKB:PA27778 InParanoid:Q04743
            PhylomeDB:Q04743 GenomeRNAi:2018 NextBio:8177 ArrayExpress:Q04743
            Bgee:Q04743 CleanEx:HS_EMX2 Genevestigator:Q04743
            GermOnline:ENSG00000170370 Uniprot:Q04743
        Length = 252

 Score = 156 (60.0 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 30/59 (50%), Positives = 40/59 (67%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             K KR RTAFS  QL RL+  F +N Y+    R++LA+ L L E Q+K+WFQN+R K K+
Sbjct:   153 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKR 211


>UNIPROTKB|Q08820 [details] [associations]
            symbol:hoxd1 "Homeobox protein Hox-D1" species:8355
            "Xenopus laevis" [GO:0030902 "hindbrain development" evidence=IMP]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0030902 KO:K09301 HOVERGEN:HBG006089 CTD:3231 EMBL:M63873
            EMBL:L25857 EMBL:BC106402 EMBL:X62052 PIR:A40357
            RefSeq:NP_001084035.1 UniGene:Xl.53491 ProteinModelPortal:Q08820
            SMR:Q08820 GeneID:399267 KEGG:xla:399267 Xenbase:XB-GENE-482735
            Uniprot:Q08820
        Length = 300

 Score = 159 (61.0 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 35/73 (47%), Positives = 45/73 (61%)

Query:     1 PRSRRIKSGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQI 60
             P  + I S     S     RT F+ +QL+ L+ EF  N+YLT  RR E+AN L LN+ Q+
Sbjct:   185 PPKKSIPSEYGVTSPPCNVRTNFTTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQV 244

Query:    61 KIWFQNKRAKIKK 73
             KIWFQN+R K KK
Sbjct:   245 KIWFQNRRMKQKK 257


>UNIPROTKB|Q17R00 [details] [associations]
            symbol:EMX2 "Homeobox protein EMX2" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0072001 "renal
            system development" evidence=IEA] [GO:0042493 "response to drug"
            evidence=IEA] [GO:0030182 "neuron differentiation" evidence=IEA]
            [GO:0021885 "forebrain cell migration" evidence=IEA] [GO:0021846
            "cell proliferation in forebrain" evidence=IEA] [GO:0021796
            "cerebral cortex regionalization" evidence=IEA] [GO:0021542
            "dentate gyrus development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030182
            GO:GO:0042493 GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GO:GO:0021846 GO:GO:0021542 eggNOG:NOG264928 KO:K09317
            GeneTree:ENSGT00680000099625 HOGENOM:HOG000247032
            HOVERGEN:HBG005024 GO:GO:0021796 EMBL:BC118094 IPI:IPI00711250
            RefSeq:NP_001069313.1 UniGene:Bt.27308 ProteinModelPortal:Q17R00
            PRIDE:Q17R00 Ensembl:ENSBTAT00000003937 GeneID:523601
            KEGG:bta:523601 CTD:2018 InParanoid:Q17R00 OMA:QMNPFLN
            OrthoDB:EOG4BP1CQ NextBio:20873784 GO:GO:0021885 GO:GO:0072001
            Uniprot:Q17R00
        Length = 253

 Score = 156 (60.0 bits), Expect = 2.7e-11, P = 2.7e-11
 Identities = 30/59 (50%), Positives = 40/59 (67%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             K KR RTAFS  QL RL+  F +N Y+    R++LA+ L L E Q+K+WFQN+R K K+
Sbjct:   154 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKR 212


>UNIPROTKB|E2RQP4 [details] [associations]
            symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0072001
            "renal system development" evidence=IEA] [GO:0042493 "response to
            drug" evidence=IEA] [GO:0030182 "neuron differentiation"
            evidence=IEA] [GO:0021885 "forebrain cell migration" evidence=IEA]
            [GO:0021846 "cell proliferation in forebrain" evidence=IEA]
            [GO:0021796 "cerebral cortex regionalization" evidence=IEA]
            [GO:0021542 "dentate gyrus development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000976 "transcription regulatory
            region sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030182
            GO:GO:0042493 GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
            GO:GO:0021846 GO:GO:0021542 KO:K09317 GeneTree:ENSGT00680000099625
            GO:GO:0021796 CTD:2018 OMA:QMNPFLN GO:GO:0021885 GO:GO:0072001
            EMBL:AAEX03015567 EMBL:AAEX03015568 EMBL:AAEX03015569
            RefSeq:XP_853333.1 ProteinModelPortal:E2RQP4 SMR:E2RQP4
            Ensembl:ENSCAFT00000019038 GeneID:610697 KEGG:cfa:610697
            NextBio:20896247 Uniprot:E2RQP4
        Length = 253

 Score = 156 (60.0 bits), Expect = 2.7e-11, P = 2.7e-11
 Identities = 30/59 (50%), Positives = 40/59 (67%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             K KR RTAFS  QL RL+  F +N Y+    R++LA+ L L E Q+K+WFQN+R K K+
Sbjct:   154 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKR 212


>MGI|MGI:95388 [details] [associations]
            symbol:Emx2 "empty spiracles homeobox 2" species:10090 "Mus
            musculus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007420 "brain development"
            evidence=IMP] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IGI;IMP] [GO:0010468 "regulation of gene
            expression" evidence=IMP] [GO:0021542 "dentate gyrus development"
            evidence=IMP] [GO:0021796 "cerebral cortex regionalization"
            evidence=IGI;IMP] [GO:0021846 "cell proliferation in forebrain"
            evidence=IMP] [GO:0021885 "forebrain cell migration" evidence=IMP]
            [GO:0021987 "cerebral cortex development" evidence=IGI] [GO:0030182
            "neuron differentiation" evidence=IMP] [GO:0030900 "forebrain
            development" evidence=IGI;IMP] [GO:0042493 "response to drug"
            evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0072001 "renal system development" evidence=IGI]
            InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:95388 GO:GO:0005634
            GO:GO:0030182 GO:GO:0042493 GO:GO:0009952 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            EMBL:CH466585 GO:GO:0000976 GO:GO:0010468 GO:GO:0021846
            GO:GO:0021542 eggNOG:NOG264928 KO:K09317
            GeneTree:ENSGT00680000099625 HOGENOM:HOG000247032
            HOVERGEN:HBG005024 GO:GO:0021796 CTD:2018 OMA:QMNPFLN
            OrthoDB:EOG4BP1CQ GO:GO:0021885 GO:GO:0072001 EMBL:AY117415
            EMBL:AC098733 EMBL:X68882 IPI:IPI00230094 PIR:S29086
            RefSeq:NP_034262.2 UniGene:Mm.245394 ProteinModelPortal:Q04744
            STRING:Q04744 PhosphoSite:Q04744 PRIDE:Q04744
            Ensembl:ENSMUST00000062216 GeneID:13797 KEGG:mmu:13797
            UCSC:uc008ibl.1 InParanoid:Q04744 NextBio:284546 CleanEx:MM_EMX2
            Genevestigator:Q04744 GermOnline:ENSMUSG00000043969 Uniprot:Q04744
        Length = 253

 Score = 156 (60.0 bits), Expect = 2.7e-11, P = 2.7e-11
 Identities = 30/59 (50%), Positives = 40/59 (67%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             K KR RTAFS  QL RL+  F +N Y+    R++LA+ L L E Q+K+WFQN+R K K+
Sbjct:   154 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKR 212


>RGD|1564797 [details] [associations]
            symbol:Emx2 "empty spiracles homeobox 2" species:10116 "Rattus
            norvegicus" [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007420
            "brain development" evidence=ISO] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IEA;ISO] [GO:0010468 "regulation of
            gene expression" evidence=ISO] [GO:0021542 "dentate gyrus
            development" evidence=IEA;ISO] [GO:0021796 "cerebral cortex
            regionalization" evidence=IEA;ISO] [GO:0021846 "cell proliferation
            in forebrain" evidence=IEA;ISO] [GO:0021885 "forebrain cell
            migration" evidence=IEA;ISO] [GO:0021987 "cerebral cortex
            development" evidence=ISO] [GO:0030182 "neuron differentiation"
            evidence=IEA;ISO] [GO:0030900 "forebrain development" evidence=ISO]
            [GO:0042493 "response to drug" evidence=IEA;ISO] [GO:0072001 "renal
            system development" evidence=IEA;ISO] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:1564797 GO:GO:0005634 GO:GO:0030182 GO:GO:0042493
            GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0021846
            GO:GO:0021542 KO:K09317 GeneTree:ENSGT00680000099625 GO:GO:0021796
            CTD:2018 OMA:QMNPFLN OrthoDB:EOG4BP1CQ GO:GO:0021885 GO:GO:0072001
            EMBL:CH473986 IPI:IPI00358539 RefSeq:NP_001102639.1
            UniGene:Rn.16276 SMR:D3ZCK7 Ensembl:ENSRNOT00000012564
            GeneID:499380 KEGG:rno:499380 NextBio:702728 Uniprot:D3ZCK7
        Length = 253

 Score = 156 (60.0 bits), Expect = 2.7e-11, P = 2.7e-11
 Identities = 30/59 (50%), Positives = 40/59 (67%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             K KR RTAFS  QL RL+  F +N Y+    R++LA+ L L E Q+K+WFQN+R K K+
Sbjct:   154 KPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKR 212


>MGI|MGI:88362 [details] [associations]
            symbol:Cdx4 "caudal type homeobox 4" species:10090 "Mus
            musculus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=IGI] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] [GO:0001568 "blood vessel development" evidence=IGI]
            [GO:0001890 "placenta development" evidence=IGI] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IGI] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0060711 "labyrinthine layer development"
            evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 MGI:MGI:88362 GO:GO:0005634
            GO:GO:0009952 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
            GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 eggNOG:NOG291290
            KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
            CTD:1046 EMBL:L08061 IPI:IPI00116620 PIR:A56676 RefSeq:NP_031700.1
            UniGene:Mm.4353 ProteinModelPortal:Q07424 SMR:Q07424 STRING:Q07424
            PhosphoSite:Q07424 PRIDE:Q07424 Ensembl:ENSMUST00000033689
            GeneID:12592 KEGG:mmu:12592 InParanoid:Q07424 NextBio:281742
            Bgee:Q07424 CleanEx:MM_CDX4 Genevestigator:Q07424
            GermOnline:ENSMUSG00000031326 Uniprot:Q07424
        Length = 282

 Score = 158 (60.7 bits), Expect = 2.7e-11, P = 2.7e-11
 Identities = 36/71 (50%), Positives = 48/71 (67%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK  R+KEK  R  ++  Q   L+ EF  NRY+T RR+ ELA  LGL+E Q+KIWFQN+
Sbjct:   165 TGKT-RTKEKY-RVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNR 222

Query:    68 RAKIKKASGQK 78
             RAK +K   +K
Sbjct:   223 RAKERKMIKKK 233


>UNIPROTKB|F1RZF8 [details] [associations]
            symbol:HOXD1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
            skeletal system development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09301 OMA:GDGAFVS
            EMBL:CU570829 RefSeq:XP_001925052.2 UniGene:Ssc.95040
            Ensembl:ENSSSCT00000017407 GeneID:100157662 KEGG:ssc:100157662
            Uniprot:F1RZF8
        Length = 327

 Score = 160 (61.4 bits), Expect = 2.7e-11, P = 2.7e-11
 Identities = 32/54 (59%), Positives = 40/54 (74%)

Query:    20 RTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKK 73
             RT FS +QL+ L+ EF  N+YLT  RR E+AN L LN+ Q+KIWFQN+R K KK
Sbjct:   232 RTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKK 285


>UNIPROTKB|K7GKV4 [details] [associations]
            symbol:LOC100623433 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000976 "transcription regulatory region
            sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
            InterPro:IPR001356 InterPro:IPR006820 InterPro:IPR009057
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00530000063388 EMBL:FP245529 RefSeq:XP_003360417.1
            Ensembl:ENSSSCT00000034899 GeneID:100623433 Uniprot:K7GKV4
        Length = 284

 Score = 158 (60.7 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 36/71 (50%), Positives = 48/71 (67%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             +GK  R+KEK  R  ++  Q   L+ EF  NRY+T RR+ ELA  LGL+E Q+KIWFQN+
Sbjct:   167 TGKT-RTKEKY-RVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNR 224

Query:    68 RAKIKKASGQK 78
             RAK +K   +K
Sbjct:   225 RAKERKMIKKK 235


>FB|FBgn0014949 [details] [associations]
            symbol:btn "buttonless" species:7227 "Drosophila
            melanogaster" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
            PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
            SUPFAM:SSF46689 HSSP:P14653 EMBL:S75228 ProteinModelPortal:Q26381
            FlyBase:FBgn0014949 InParanoid:Q26381 OrthoDB:EOG4RFJ98
            Uniprot:Q26381
        Length = 158

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 33/76 (43%), Positives = 46/76 (60%)

Query:     1 PRSRRIKSGKDKR---SKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNE 57
             P  + + S + K    S  ++ RTAFS  QL +L+ EF  + YLT  RR E+A  L L E
Sbjct:    68 PTGQELPSQRSKLRAISSNRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTE 127

Query:    58 AQIKIWFQNKRAKIKK 73
              Q+K+WFQN+R K K+
Sbjct:   128 RQVKVWFQNRRMKCKR 143


>UNIPROTKB|F1NJ95 [details] [associations]
            symbol:CNOT2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GeneTree:ENSGT00680000099625 EMBL:AADN02049009
            EMBL:AADN02049010 IPI:IPI00820792 Ensembl:ENSGALT00000017229
            OMA:CFRAKAG Uniprot:F1NJ95
        Length = 168

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 33/77 (42%), Positives = 46/77 (59%)

Query:    10 KDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRA 69
             K K  K KR RT F+ +QL+RL+ EF   +Y+    R  LA+ L L E Q+K+WFQN+R 
Sbjct:    85 KTKAGKAKRVRTIFTSDQLARLEKEFARQQYMVGTERCLLASALHLTEEQVKVWFQNRRI 144

Query:    70 KIKKASGQKNPLALQLM 86
             K +K S ++    L  M
Sbjct:   145 KWRKQSLEQQQAKLAKM 161


>UNIPROTKB|F1NVN6 [details] [associations]
            symbol:MNR2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
            Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00660000095141 EMBL:AADN02016763 IPI:IPI00586200
            Ensembl:ENSGALT00000018518 OMA:MAVEPEK Uniprot:F1NVN6
        Length = 158

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 31/64 (48%), Positives = 44/64 (68%)

Query:    15 KEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNKRAKIKKA 74
             K +RPRTAF+ +QL  L+ +F  N+YL+  +R E+A  L L E Q+KIWFQN+R K K++
Sbjct:    10 KCRRPRTAFTSQQLLELENQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRS 69

Query:    75 SGQK 78
                K
Sbjct:    70 RKAK 73


>UNIPROTKB|F1MCF6 [details] [associations]
            symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
            InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
            GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
            InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
            GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
            EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
            OMA:MTIKEEY Uniprot:F1MCF6
        Length = 118

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 34/68 (50%), Positives = 46/68 (67%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SGK  R+K+K  R  ++  Q   L+ EF  +RY+T RR+ ELA  LGL E Q+KIWFQN+
Sbjct:     1 SGKT-RTKDKY-RVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNR 58

Query:    68 RAKIKKAS 75
             RAK +K +
Sbjct:    59 RAKERKVN 66


>UNIPROTKB|E2R5U1 [details] [associations]
            symbol:HOXA7 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
            InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
            Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
            PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
            PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
            CTD:3204 KO:K09307 OMA:EHKDEGP EMBL:AAEX03009390 RefSeq:XP_864678.2
            Ensembl:ENSCAFT00000004737 GeneID:482371 KEGG:cfa:482371
            Uniprot:E2R5U1
        Length = 239

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 37/75 (49%), Positives = 45/75 (60%)

Query:     8 SGKDKRSKEKRPRTAFSGEQLSRLKVEFTENRYLTERRRQELANELGLNEAQIKIWFQNK 67
             SG D+    KR R  ++  Q   L+ EF  NRYLT RRR E+A+ L L E QIKIWFQN+
Sbjct:   126 SGPDR----KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNR 181

Query:    68 RAKIKKASGQKNPLA 82
             R K KK    + P A
Sbjct:   182 RMKWKKEHKDEGPAA 196

WARNING:  HSPs involving 1599 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.128   0.353    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      120        97   0.00091  102 3  11 23  0.41    30
                                                     29  0.44    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1849
  No. of states in DFA:  511 (54 KB)
  Total size of DFA:  95 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.61u 0.07s 13.68t   Elapsed:  00:00:05
  Total cpu time:  13.64u 0.07s 13.71t   Elapsed:  00:00:05
  Start:  Thu Aug 15 12:23:42 2013   End:  Thu Aug 15 12:23:47 2013
WARNINGS ISSUED:  2

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