Query psy4626
Match_columns 542
No_of_seqs 562 out of 3301
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 21:38:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4626.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4626hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n58_A Adenosylhomocysteinase; 100.0 2.7E-68 9.2E-73 566.0 28.7 259 35-296 205-464 (464)
2 3gvp_A Adenosylhomocysteinase 100.0 2.1E-66 7.3E-71 550.9 31.4 291 1-291 36-434 (435)
3 3h9u_A Adenosylhomocysteinase; 100.0 1E-63 3.5E-68 531.6 27.2 296 1-296 25-436 (436)
4 3ond_A Adenosylhomocysteinase; 100.0 6.6E-55 2.3E-59 470.0 29.2 261 36-296 224-488 (488)
5 1v8b_A Adenosylhomocysteinase; 100.0 6.7E-43 2.3E-47 377.2 29.9 258 38-296 218-479 (479)
6 3d64_A Adenosylhomocysteinase; 100.0 3.2E-42 1.1E-46 373.1 28.8 256 38-296 238-494 (494)
7 3ce6_A Adenosylhomocysteinase; 100.0 9.9E-42 3.4E-46 370.0 27.5 256 40-296 237-494 (494)
8 3n58_A Adenosylhomocysteinase; 100.0 6.5E-41 2.2E-45 356.1 7.3 365 1-433 27-435 (464)
9 3ond_A Adenosylhomocysteinase; 100.0 3.7E-39 1.3E-43 347.5 3.8 104 437-541 105-253 (488)
10 3gvp_A Adenosylhomocysteinase 100.0 6.5E-39 2.2E-43 340.4 4.1 315 72-433 49-410 (435)
11 3h9u_A Adenosylhomocysteinase; 100.0 4.9E-38 1.7E-42 334.5 -4.7 166 269-434 221-408 (436)
12 3ce6_A Adenosylhomocysteinase; 100.0 8.5E-30 2.9E-34 276.5 4.6 110 431-541 111-262 (494)
13 1v8b_A Adenosylhomocysteinase; 99.9 4.1E-28 1.4E-32 261.9 3.3 104 437-541 95-245 (479)
14 3d64_A Adenosylhomocysteinase; 99.9 2.4E-25 8.2E-30 241.2 3.7 104 437-541 123-265 (494)
15 4g2n_A D-isomer specific 2-hyd 99.6 2.2E-14 7.7E-19 149.4 17.4 153 24-179 104-281 (345)
16 3kb6_A D-lactate dehydrogenase 99.6 6.8E-15 2.3E-19 152.6 13.1 153 24-179 74-248 (334)
17 4e5n_A Thermostable phosphite 99.6 1.7E-14 5.9E-19 149.4 15.1 155 24-179 77-254 (330)
18 4hy3_A Phosphoglycerate oxidor 99.6 4.4E-14 1.5E-18 148.2 18.0 155 24-180 107-285 (365)
19 3jtm_A Formate dehydrogenase, 99.6 4.2E-14 1.4E-18 147.6 15.9 155 24-179 96-274 (351)
20 3evt_A Phosphoglycerate dehydr 99.5 4.7E-14 1.6E-18 145.8 15.8 154 24-179 71-245 (324)
21 3hg7_A D-isomer specific 2-hyd 99.5 9.7E-14 3.3E-18 143.4 15.0 153 24-179 77-248 (324)
22 3gg9_A D-3-phosphoglycerate de 99.5 1.9E-13 6.5E-18 142.8 15.7 108 72-180 155-270 (352)
23 1sc6_A PGDH, D-3-phosphoglycer 99.5 3.9E-13 1.3E-17 142.8 17.9 151 24-179 79-251 (404)
24 2g76_A 3-PGDH, D-3-phosphoglyc 99.5 2.7E-13 9.1E-18 140.8 15.7 153 24-178 99-272 (335)
25 3k5p_A D-3-phosphoglycerate de 99.5 4E-13 1.4E-17 142.9 17.1 152 23-179 89-262 (416)
26 1wwk_A Phosphoglycerate dehydr 99.5 3.7E-13 1.3E-17 138.0 15.4 153 24-178 76-249 (307)
27 2pi1_A D-lactate dehydrogenase 99.5 2.4E-13 8.1E-18 141.1 13.7 153 24-179 74-248 (334)
28 2nac_A NAD-dependent formate d 99.5 7.5E-13 2.6E-17 140.1 17.2 155 24-179 123-301 (393)
29 3oet_A Erythronate-4-phosphate 99.5 2.7E-13 9.3E-18 142.7 13.2 147 24-179 71-228 (381)
30 4dgs_A Dehydrogenase; structur 99.5 9.6E-13 3.3E-17 136.8 16.9 149 24-178 103-275 (340)
31 2j6i_A Formate dehydrogenase; 99.5 4.1E-13 1.4E-17 140.8 14.2 156 24-179 94-275 (364)
32 2ekl_A D-3-phosphoglycerate de 99.5 8.1E-13 2.8E-17 135.8 16.1 154 24-179 78-250 (313)
33 2yq5_A D-isomer specific 2-hyd 99.4 4.6E-13 1.6E-17 139.4 13.1 104 72-178 143-253 (343)
34 2o4c_A Erythronate-4-phosphate 99.4 1.4E-12 4.6E-17 137.5 15.7 147 24-179 68-225 (380)
35 3d4o_A Dipicolinate synthase s 99.4 3.2E-12 1.1E-16 129.7 16.5 149 23-173 102-253 (293)
36 1dxy_A D-2-hydroxyisocaproate 99.4 1.6E-12 5.5E-17 134.7 13.4 105 72-179 140-251 (333)
37 1mx3_A CTBP1, C-terminal bindi 99.4 4.8E-12 1.7E-16 131.9 16.5 154 24-179 95-277 (347)
38 1gdh_A D-glycerate dehydrogena 99.4 3.4E-12 1.2E-16 131.5 14.8 142 24-167 77-241 (320)
39 3pp8_A Glyoxylate/hydroxypyruv 99.4 1.3E-12 4.5E-17 134.5 10.7 107 72-179 134-247 (315)
40 2w2k_A D-mandelate dehydrogena 99.4 1.1E-11 3.7E-16 129.2 17.3 154 24-178 90-273 (348)
41 2rir_A Dipicolinate synthase, 99.4 1.3E-11 4.3E-16 125.6 17.0 148 23-172 104-254 (300)
42 1xdw_A NAD+-dependent (R)-2-hy 99.4 3.8E-12 1.3E-16 131.8 13.0 103 73-178 142-251 (331)
43 3gvx_A Glycerate dehydrogenase 99.3 1.3E-11 4.4E-16 125.7 15.0 102 73-179 118-227 (290)
44 1j4a_A D-LDH, D-lactate dehydr 99.3 8.1E-12 2.8E-16 129.4 13.4 103 73-178 142-252 (333)
45 1qp8_A Formate dehydrogenase; 99.3 2.3E-11 7.7E-16 124.5 15.7 89 74-167 121-213 (303)
46 1ygy_A PGDH, D-3-phosphoglycer 99.3 2.1E-11 7.3E-16 133.7 16.4 142 24-167 76-235 (529)
47 2cuk_A Glycerate dehydrogenase 99.3 5.4E-11 1.9E-15 122.1 18.4 137 24-167 75-232 (311)
48 3ba1_A HPPR, hydroxyphenylpyru 99.3 3E-11 1E-15 125.2 13.8 149 24-178 97-268 (333)
49 2gcg_A Glyoxylate reductase/hy 99.3 9.7E-11 3.3E-15 121.0 17.3 143 24-167 86-249 (330)
50 2d0i_A Dehydrogenase; structur 99.2 2E-10 6.7E-15 119.0 18.6 152 24-178 74-252 (333)
51 2dbq_A Glyoxylate reductase; D 99.2 9.2E-11 3.1E-15 121.4 14.6 94 73-167 146-243 (334)
52 3kb6_A D-lactate dehydrogenase 99.1 4E-10 1.4E-14 116.8 11.4 189 128-355 38-242 (334)
53 1l7d_A Nicotinamide nucleotide 99.1 4.7E-10 1.6E-14 118.1 11.8 91 74-164 169-294 (384)
54 1x13_A NAD(P) transhydrogenase 99.1 4.3E-10 1.5E-14 119.2 11.6 90 75-164 170-292 (401)
55 3jtm_A Formate dehydrogenase, 99.1 3.3E-10 1.1E-14 118.2 9.9 220 90-355 30-268 (351)
56 3p2y_A Alanine dehydrogenase/p 99.0 8.5E-10 2.9E-14 116.0 11.3 91 75-165 182-303 (381)
57 4dio_A NAD(P) transhydrogenase 99.0 1E-09 3.5E-14 116.3 11.1 92 74-165 187-313 (405)
58 2vhw_A Alanine dehydrogenase; 98.9 1.9E-09 6.6E-14 113.2 9.9 92 74-165 165-269 (377)
59 1c1d_A L-phenylalanine dehydro 98.9 9.8E-09 3.4E-13 107.1 12.8 109 56-167 154-264 (355)
60 2pi1_A D-lactate dehydrogenase 98.8 8.5E-09 2.9E-13 106.8 10.6 189 128-355 38-242 (334)
61 4g2n_A D-isomer specific 2-hyd 98.8 1.4E-08 4.7E-13 105.8 10.9 189 128-354 67-274 (345)
62 4e5n_A Thermostable phosphite 98.8 1.9E-08 6.4E-13 104.1 11.8 188 128-354 41-247 (330)
63 2eez_A Alanine dehydrogenase; 98.8 1.3E-08 4.3E-13 106.5 9.7 93 74-166 163-268 (369)
64 3k5p_A D-3-phosphoglycerate de 98.8 8.8E-08 3E-12 101.9 16.2 223 79-355 17-256 (416)
65 3oet_A Erythronate-4-phosphate 98.7 3.7E-08 1.3E-12 103.7 11.2 171 128-354 36-221 (381)
66 3two_A Mannitol dehydrogenase; 98.7 5.2E-08 1.8E-12 100.3 11.7 121 61-184 163-290 (348)
67 2yq5_A D-isomer specific 2-hyd 98.7 6.9E-08 2.4E-12 100.4 12.5 225 79-355 3-248 (343)
68 1pjc_A Protein (L-alanine dehy 98.7 2.9E-08 9.8E-13 103.6 9.4 92 75-166 165-269 (361)
69 4dgs_A Dehydrogenase; structur 98.7 4.2E-08 1.4E-12 101.9 10.3 184 130-355 69-270 (340)
70 1yqd_A Sinapyl alcohol dehydro 98.7 9.1E-08 3.1E-12 99.5 12.3 121 61-183 173-303 (366)
71 2j6i_A Formate dehydrogenase; 98.7 3.7E-08 1.2E-12 103.2 8.9 223 86-354 24-268 (364)
72 1piw_A Hypothetical zinc-type 98.7 7.5E-08 2.6E-12 99.7 11.1 104 61-167 166-279 (360)
73 1uuf_A YAHK, zinc-type alcohol 98.7 9.9E-08 3.4E-12 99.5 12.0 120 61-183 181-310 (369)
74 3oj0_A Glutr, glutamyl-tRNA re 98.7 5.2E-08 1.8E-12 87.8 8.6 88 76-166 20-112 (144)
75 4ej6_A Putative zinc-binding d 98.7 1.8E-08 6.2E-13 105.0 6.1 120 63-185 171-309 (370)
76 2rir_A Dipicolinate synthase, 98.6 8.9E-08 3E-12 97.1 11.0 225 73-350 3-254 (300)
77 1pl8_A Human sorbitol dehydrog 98.6 3.5E-08 1.2E-12 102.1 8.1 120 62-184 159-295 (356)
78 3gg9_A D-3-phosphoglycerate de 98.6 5.6E-08 1.9E-12 101.4 9.0 198 128-354 44-262 (352)
79 1sc6_A PGDH, D-3-phosphoglycer 98.6 1.2E-07 4.2E-12 100.5 11.8 178 128-346 43-237 (404)
80 1e3j_A NADP(H)-dependent ketos 98.6 6.1E-08 2.1E-12 100.0 9.2 121 62-185 156-294 (352)
81 3hg7_A D-isomer specific 2-hyd 98.6 4.3E-08 1.5E-12 101.2 7.6 182 128-354 43-241 (324)
82 4hy3_A Phosphoglycerate oxidor 98.6 2.3E-08 7.9E-13 104.8 5.6 186 129-355 73-278 (365)
83 3l07_A Bifunctional protein fo 98.6 2.6E-07 8.9E-12 93.4 12.6 91 59-166 144-235 (285)
84 3fbg_A Putative arginate lyase 98.6 1.6E-07 5.3E-12 96.8 11.0 122 61-183 130-267 (346)
85 2cf5_A Atccad5, CAD, cinnamyl 98.6 1.1E-07 3.8E-12 98.4 9.9 105 61-167 166-278 (357)
86 3s2e_A Zinc-containing alcohol 98.6 1.5E-07 5E-12 96.6 10.5 120 61-183 153-284 (340)
87 3ngx_A Bifunctional protein fo 98.6 2.1E-07 7.2E-12 93.6 11.3 89 59-166 135-224 (276)
88 3d4o_A Dipicolinate synthase s 98.6 4.1E-07 1.4E-11 92.0 13.6 223 75-350 3-252 (293)
89 1wwk_A Phosphoglycerate dehydr 98.6 1.7E-07 5.7E-12 95.9 10.6 187 128-354 40-243 (307)
90 1leh_A Leucine dehydrogenase; 98.6 2.3E-07 7.8E-12 97.2 11.4 110 56-167 151-263 (364)
91 2nac_A NAD-dependent formate d 98.6 9.9E-08 3.4E-12 100.9 8.7 216 93-354 60-294 (393)
92 2h6e_A ADH-4, D-arabinose 1-de 98.6 1.4E-07 4.8E-12 96.9 9.6 118 61-181 153-288 (344)
93 1rjw_A ADH-HT, alcohol dehydro 98.6 1.7E-07 5.9E-12 96.2 10.2 119 61-182 151-281 (339)
94 1xdw_A NAD+-dependent (R)-2-hy 98.6 1.2E-06 4E-11 90.5 16.4 185 128-354 41-245 (331)
95 2g76_A 3-PGDH, D-3-phosphoglyc 98.5 2.7E-07 9.1E-12 95.6 11.4 187 128-354 63-266 (335)
96 1e3i_A Alcohol dehydrogenase, 98.5 6E-07 2E-11 93.3 13.5 103 62-166 182-299 (376)
97 3p2o_A Bifunctional protein fo 98.5 4.4E-07 1.5E-11 91.7 11.8 91 59-166 143-234 (285)
98 4a5o_A Bifunctional protein fo 98.5 4E-07 1.4E-11 92.1 11.4 92 59-167 144-236 (286)
99 3m6i_A L-arabinitol 4-dehydrog 98.5 1.3E-07 4.4E-12 97.8 7.7 121 62-185 167-306 (363)
100 3uog_A Alcohol dehydrogenase; 98.5 2.8E-07 9.7E-12 95.5 10.0 118 61-181 175-307 (363)
101 1p0f_A NADP-dependent alcohol 98.5 5.7E-07 1.9E-11 93.4 12.3 103 62-166 178-295 (373)
102 2ekl_A D-3-phosphoglycerate de 98.5 3.3E-07 1.1E-11 93.9 10.3 185 128-354 42-243 (313)
103 1kol_A Formaldehyde dehydrogen 98.5 5.5E-07 1.9E-11 94.3 11.9 103 61-166 172-302 (398)
104 1edz_A 5,10-methylenetetrahydr 98.5 3.2E-07 1.1E-11 94.4 9.8 105 59-166 151-277 (320)
105 2d8a_A PH0655, probable L-thre 98.5 3.7E-07 1.3E-11 93.9 10.4 117 62-182 156-288 (348)
106 1gpj_A Glutamyl-tRNA reductase 98.5 3.4E-07 1.2E-11 96.9 10.1 91 75-165 165-267 (404)
107 1dxy_A D-2-hydroxyisocaproate 98.5 2.2E-07 7.7E-12 96.0 8.5 186 128-355 40-245 (333)
108 4a26_A Putative C-1-tetrahydro 98.5 5.3E-07 1.8E-11 91.8 11.0 91 59-166 148-241 (300)
109 1a4i_A Methylenetetrahydrofola 98.5 7.5E-07 2.6E-11 90.6 12.0 92 58-166 147-239 (301)
110 2jhf_A Alcohol dehydrogenase E 98.5 1.1E-06 3.7E-11 91.3 13.5 103 62-166 178-295 (374)
111 3ip1_A Alcohol dehydrogenase, 98.5 5.1E-07 1.7E-11 95.1 11.1 122 63-185 200-341 (404)
112 1f8f_A Benzyl alcohol dehydrog 98.5 3.1E-07 1.1E-11 95.4 9.2 120 62-183 177-312 (371)
113 2dph_A Formaldehyde dismutase; 98.5 2.2E-07 7.7E-12 97.5 8.3 102 62-166 173-301 (398)
114 1cdo_A Alcohol dehydrogenase; 98.5 1.4E-06 4.7E-11 90.5 14.0 103 63-167 180-297 (374)
115 1iz0_A Quinone oxidoreductase; 98.5 4E-07 1.4E-11 91.7 9.6 118 61-183 112-240 (302)
116 1b0a_A Protein (fold bifunctio 98.5 5.7E-07 1.9E-11 91.0 10.4 91 59-166 142-233 (288)
117 1vj0_A Alcohol dehydrogenase, 98.4 8.2E-07 2.8E-11 92.7 12.0 122 61-184 181-323 (380)
118 2o4c_A Erythronate-4-phosphate 98.4 3.6E-07 1.2E-11 96.2 9.1 169 129-353 34-217 (380)
119 2fzw_A Alcohol dehydrogenase c 98.4 1.1E-06 3.8E-11 91.1 12.5 103 62-166 177-294 (373)
120 2c2x_A Methylenetetrahydrofola 98.4 8.4E-07 2.9E-11 89.5 11.1 91 59-166 141-234 (281)
121 3jv7_A ADH-A; dehydrogenase, n 98.4 5.4E-07 1.9E-11 92.5 9.7 106 61-167 156-273 (345)
122 3fpc_A NADP-dependent alcohol 98.4 2.8E-07 9.6E-12 95.0 7.5 102 62-166 154-268 (352)
123 3evt_A Phosphoglycerate dehydr 98.4 1.7E-07 5.6E-12 96.8 5.5 183 129-354 37-238 (324)
124 2b5w_A Glucose dehydrogenase; 98.4 5.4E-07 1.8E-11 93.1 9.4 111 62-175 154-287 (357)
125 1ygy_A PGDH, D-3-phosphoglycer 98.4 9E-07 3.1E-11 97.0 11.6 186 128-353 40-242 (529)
126 3qwb_A Probable quinone oxidor 98.4 1.4E-06 4.9E-11 88.9 12.4 119 61-182 134-268 (334)
127 2cdc_A Glucose dehydrogenase g 98.4 5.2E-07 1.8E-11 93.6 9.0 97 77-174 181-291 (366)
128 4dvj_A Putative zinc-dependent 98.4 1.3E-06 4.3E-11 90.8 11.9 120 62-183 153-288 (363)
129 3uko_A Alcohol dehydrogenase c 98.4 6.4E-07 2.2E-11 93.3 9.7 104 61-166 179-297 (378)
130 2dq4_A L-threonine 3-dehydroge 98.4 5.2E-07 1.8E-11 92.6 8.7 118 62-183 152-284 (343)
131 3tqh_A Quinone oxidoreductase; 98.4 7.3E-07 2.5E-11 90.7 9.4 102 61-167 139-248 (321)
132 2hcy_A Alcohol dehydrogenase 1 98.4 9.9E-07 3.4E-11 90.7 10.5 119 62-183 157-291 (347)
133 4eez_A Alcohol dehydrogenase 1 98.4 1.7E-06 5.7E-11 88.6 12.1 121 61-184 150-285 (348)
134 4eye_A Probable oxidoreductase 98.4 1.2E-06 4.2E-11 90.0 11.1 104 61-167 145-260 (342)
135 1vl6_A Malate oxidoreductase; 98.4 4.4E-06 1.5E-10 87.8 15.0 106 70-176 185-306 (388)
136 3goh_A Alcohol dehydrogenase, 98.4 5.3E-07 1.8E-11 91.4 7.6 102 60-166 128-231 (315)
137 1h2b_A Alcohol dehydrogenase; 98.3 1.8E-06 6E-11 89.4 10.8 119 61-183 171-305 (359)
138 1jvb_A NAD(H)-dependent alcoho 98.3 1.4E-06 4.7E-11 89.6 9.3 113 61-176 157-285 (347)
139 4dll_A 2-hydroxy-3-oxopropiona 98.3 1.7E-06 5.6E-11 88.5 9.7 92 76-167 30-127 (320)
140 4a0s_A Octenoyl-COA reductase/ 98.3 2.6E-06 8.8E-11 90.7 11.5 123 61-185 204-360 (447)
141 4dup_A Quinone oxidoreductase; 98.3 2.1E-06 7.2E-11 88.6 10.5 120 61-183 153-288 (353)
142 3jyn_A Quinone oxidoreductase; 98.3 1.9E-06 6.5E-11 87.7 10.0 113 61-176 126-254 (325)
143 3pef_A 6-phosphogluconate dehy 98.3 2E-06 6.9E-11 86.1 9.9 90 78-167 2-98 (287)
144 2eih_A Alcohol dehydrogenase; 98.3 2.4E-06 8E-11 87.7 10.5 120 61-183 152-287 (343)
145 1gdh_A D-glycerate dehydrogena 98.3 1.6E-06 5.5E-11 89.1 9.1 188 128-354 40-249 (320)
146 3pp8_A Glyoxylate/hydroxypyruv 98.3 2.1E-06 7.3E-11 88.1 9.7 93 260-354 136-240 (315)
147 4a2c_A Galactitol-1-phosphate 98.3 3.1E-06 1.1E-10 86.5 10.9 111 74-185 158-286 (346)
148 4b7c_A Probable oxidoreductase 98.3 1.4E-06 4.9E-11 88.9 8.3 104 61-167 135-251 (336)
149 3gaz_A Alcohol dehydrogenase s 98.3 2.9E-06 9.9E-11 87.2 10.5 117 61-182 136-263 (343)
150 3ggo_A Prephenate dehydrogenas 98.2 2.2E-06 7.5E-11 87.7 9.4 90 77-167 33-131 (314)
151 1np3_A Ketol-acid reductoisome 98.2 1.2E-06 4.2E-11 90.4 7.5 90 75-164 14-107 (338)
152 2hk9_A Shikimate dehydrogenase 98.2 5E-06 1.7E-10 83.3 11.6 100 62-165 115-222 (275)
153 3doj_A AT3G25530, dehydrogenas 98.2 2.4E-06 8.3E-11 86.8 9.5 92 76-167 20-118 (310)
154 3pi7_A NADH oxidoreductase; gr 98.2 2.8E-06 9.6E-11 87.4 9.9 118 63-185 153-288 (349)
155 1j4a_A D-LDH, D-lactate dehydr 98.2 1.1E-06 3.9E-11 90.7 6.9 187 128-355 42-247 (333)
156 2h78_A Hibadh, 3-hydroxyisobut 98.2 3.4E-06 1.2E-10 84.9 10.1 90 78-167 4-100 (302)
157 3g0o_A 3-hydroxyisobutyrate de 98.2 2.4E-06 8E-11 86.5 8.7 91 77-167 7-105 (303)
158 3nx4_A Putative oxidoreductase 98.2 1.5E-06 5.1E-11 88.2 7.0 88 77-167 148-244 (324)
159 1wly_A CAAR, 2-haloacrylate re 98.2 5.2E-06 1.8E-10 84.7 11.1 115 61-178 131-262 (333)
160 1mx3_A CTBP1, C-terminal bindi 98.2 3.3E-06 1.1E-10 87.9 9.7 190 130-355 61-271 (347)
161 1gtm_A Glutamate dehydrogenase 98.2 9.8E-07 3.4E-11 94.0 5.8 98 71-176 205-310 (419)
162 2j8z_A Quinone oxidoreductase; 98.2 4E-06 1.4E-10 86.6 10.2 121 61-184 148-285 (354)
163 4e12_A Diketoreductase; oxidor 98.2 3E-06 1E-10 85.0 9.1 89 78-166 5-123 (283)
164 2g5c_A Prephenate dehydrogenas 98.2 2.9E-06 9.8E-11 84.4 8.8 89 78-167 2-99 (281)
165 2a9f_A Putative malic enzyme ( 98.2 9.7E-06 3.3E-10 85.3 13.0 122 54-176 162-301 (398)
166 2vn8_A Reticulon-4-interacting 98.2 7.7E-06 2.6E-10 85.0 12.3 104 61-166 165-282 (375)
167 3pdu_A 3-hydroxyisobutyrate de 98.2 1.8E-06 6.3E-11 86.4 7.2 90 78-167 2-98 (287)
168 1yb5_A Quinone oxidoreductase; 98.2 5.1E-06 1.8E-10 85.8 10.7 117 61-180 156-286 (351)
169 2cuk_A Glycerate dehydrogenase 98.2 6.3E-06 2.1E-10 84.4 11.2 184 128-354 39-240 (311)
170 2d5c_A AROE, shikimate 5-dehyd 98.2 6.5E-06 2.2E-10 81.6 10.8 100 62-167 103-209 (263)
171 3l6d_A Putative oxidoreductase 98.2 1.7E-06 5.7E-11 87.9 6.5 94 74-167 6-104 (306)
172 3krt_A Crotonyl COA reductase; 98.2 2.6E-06 8.9E-11 91.1 8.3 122 61-184 212-367 (456)
173 1qp8_A Formate dehydrogenase; 98.2 2.6E-06 8.9E-11 86.9 7.8 179 128-354 27-221 (303)
174 1pqw_A Polyketide synthase; ro 98.2 4.9E-06 1.7E-10 78.2 9.1 102 62-166 25-139 (198)
175 3qha_A Putative oxidoreductase 98.2 3.1E-06 1.1E-10 85.4 8.1 89 78-167 16-108 (296)
176 3gms_A Putative NADPH:quinone 98.2 2.8E-06 9.7E-11 87.0 7.8 112 61-175 130-255 (340)
177 3ba1_A HPPR, hydroxyphenylpyru 98.2 3.2E-06 1.1E-10 87.4 8.2 185 128-354 61-262 (333)
178 4ezb_A Uncharacterized conserv 98.2 4.6E-06 1.6E-10 85.3 9.3 89 78-167 25-124 (317)
179 4e21_A 6-phosphogluconate dehy 98.1 5.1E-06 1.7E-10 86.7 9.7 94 73-167 18-118 (358)
180 2vns_A Metalloreductase steap3 98.1 4.6E-06 1.6E-10 80.3 8.6 90 76-167 27-118 (215)
181 2j3h_A NADP-dependent oxidored 98.1 3.1E-06 1.1E-10 86.6 7.8 103 61-166 141-257 (345)
182 4gbj_A 6-phosphogluconate dehy 98.1 4.1E-06 1.4E-10 85.0 8.6 90 78-167 6-100 (297)
183 2g1u_A Hypothetical protein TM 98.1 8.9E-06 3E-10 73.9 9.9 71 74-144 16-96 (155)
184 1qor_A Quinone oxidoreductase; 98.1 8.5E-06 2.9E-10 82.8 10.8 103 61-166 126-241 (327)
185 3gqv_A Enoyl reductase; medium 98.1 1.8E-05 6.3E-10 82.2 13.2 90 75-166 163-265 (371)
186 3obb_A Probable 3-hydroxyisobu 98.1 6.7E-06 2.3E-10 83.7 9.6 90 78-167 4-100 (300)
187 1tt7_A YHFP; alcohol dehydroge 98.1 4.7E-06 1.6E-10 84.8 8.5 106 75-182 148-268 (330)
188 3gvx_A Glycerate dehydrogenase 98.1 5.5E-06 1.9E-10 84.1 8.9 163 128-347 30-214 (290)
189 2c0c_A Zinc binding alcohol de 98.1 4.6E-06 1.6E-10 86.5 8.3 103 61-166 149-263 (362)
190 1vpd_A Tartronate semialdehyde 98.1 5.8E-06 2E-10 82.8 8.7 90 78-167 6-102 (299)
191 1xa0_A Putative NADPH dependen 98.1 5.2E-06 1.8E-10 84.4 7.8 90 75-166 147-248 (328)
192 4b4u_A Bifunctional protein fo 98.1 1.6E-05 5.5E-10 80.8 11.2 89 61-166 164-253 (303)
193 1gu7_A Enoyl-[acyl-carrier-pro 98.1 8.5E-06 2.9E-10 84.0 9.3 112 62-176 153-290 (364)
194 1v3u_A Leukotriene B4 12- hydr 98.1 1.2E-05 4E-10 82.0 10.0 103 61-166 131-246 (333)
195 1zsy_A Mitochondrial 2-enoyl t 98.1 1.9E-05 6.5E-10 81.5 11.7 117 62-181 154-290 (357)
196 3qsg_A NAD-binding phosphogluc 98.0 8.8E-06 3E-10 82.9 8.5 91 77-167 24-120 (312)
197 2cvz_A Dehydrogenase, 3-hydrox 98.0 5.4E-06 1.8E-10 82.4 6.2 88 79-167 3-93 (289)
198 1nyt_A Shikimate 5-dehydrogena 98.0 3E-05 1E-09 77.4 11.6 103 61-167 104-217 (271)
199 2egg_A AROE, shikimate 5-dehyd 98.0 3.5E-05 1.2E-09 78.2 12.3 105 63-167 127-243 (297)
200 3fr7_A Putative ketol-acid red 98.0 7.1E-06 2.4E-10 88.5 7.1 91 74-166 50-156 (525)
201 2gcg_A Glyoxylate reductase/hy 98.0 1.7E-05 5.7E-10 81.7 9.6 181 128-346 49-250 (330)
202 3dtt_A NADP oxidoreductase; st 98.0 1.5E-05 5.2E-10 78.2 8.8 92 73-165 15-125 (245)
203 3cky_A 2-hydroxymethyl glutara 98.0 1.8E-05 6.3E-10 79.1 9.6 90 78-167 5-101 (301)
204 3c24_A Putative oxidoreductase 98.0 8.8E-06 3E-10 81.4 7.3 88 78-166 12-103 (286)
205 2f1k_A Prephenate dehydrogenas 98.0 1.6E-05 5.3E-10 78.9 8.9 87 79-167 2-94 (279)
206 2uyy_A N-PAC protein; long-cha 98.0 1.6E-05 5.6E-10 80.4 9.1 89 78-167 31-127 (316)
207 1zej_A HBD-9, 3-hydroxyacyl-CO 98.0 8.1E-06 2.8E-10 83.0 6.7 88 76-166 11-110 (293)
208 1l7d_A Nicotinamide nucleotide 98.0 2.4E-05 8.3E-10 82.1 10.4 220 91-342 21-294 (384)
209 2gf2_A Hibadh, 3-hydroxyisobut 98.0 1.5E-05 5.3E-10 79.5 8.4 88 79-167 2-97 (296)
210 3c85_A Putative glutathione-re 97.9 1.1E-05 3.7E-10 75.1 6.8 91 74-164 36-139 (183)
211 2d0i_A Dehydrogenase; structur 97.9 1.8E-05 6.3E-10 81.6 9.0 184 128-346 38-239 (333)
212 2w2k_A D-mandelate dehydrogena 97.9 2.2E-05 7.4E-10 81.6 9.2 186 132-354 51-267 (348)
213 2ahr_A Putative pyrroline carb 97.9 2.3E-05 7.8E-10 76.9 8.9 87 78-166 4-92 (259)
214 3d1l_A Putative NADP oxidoredu 97.9 9.5E-06 3.3E-10 80.0 6.1 92 75-167 8-105 (266)
215 1yb4_A Tartronic semialdehyde 97.9 1.9E-05 6.6E-10 78.6 8.4 88 78-167 4-99 (295)
216 3b1f_A Putative prephenate deh 97.9 1.6E-05 5.5E-10 79.4 7.4 89 78-167 7-104 (290)
217 3ic5_A Putative saccharopine d 97.9 3E-05 1E-09 65.7 8.2 87 76-164 4-100 (118)
218 2zb4_A Prostaglandin reductase 97.9 1.9E-05 6.4E-10 81.3 8.0 103 61-166 144-262 (357)
219 2dpo_A L-gulonate 3-dehydrogen 97.9 2.5E-05 8.5E-10 80.2 8.7 88 78-166 7-125 (319)
220 2yjz_A Metalloreductase steap4 97.1 1.7E-06 5.9E-11 82.9 0.0 90 75-167 17-108 (201)
221 3iup_A Putative NADPH:quinone 97.9 9E-06 3.1E-10 84.8 5.1 99 63-165 160-277 (379)
222 3ktd_A Prephenate dehydrogenas 97.9 1E-05 3.5E-10 84.0 5.4 90 77-167 8-104 (341)
223 3fwz_A Inner membrane protein 97.8 3E-05 1E-09 69.3 7.4 88 77-164 7-105 (140)
224 2qrj_A Saccharopine dehydrogen 97.8 3.1E-05 1.1E-09 81.6 8.1 80 76-165 213-301 (394)
225 3llv_A Exopolyphosphatase-rela 97.8 3.3E-05 1.1E-09 68.6 7.0 67 76-142 5-80 (141)
226 2hmt_A YUAA protein; RCK, KTN, 97.8 4.5E-05 1.5E-09 66.9 7.5 69 75-143 4-81 (144)
227 2i99_A MU-crystallin homolog; 97.8 5.7E-05 2E-09 77.0 9.4 89 75-166 133-228 (312)
228 2dbq_A Glyoxylate reductase; D 97.8 0.00015 5.3E-09 74.6 12.6 187 128-354 41-251 (334)
229 1p77_A Shikimate 5-dehydrogena 97.8 6.3E-05 2.1E-09 75.2 9.3 102 61-166 104-216 (272)
230 1x13_A NAD(P) transhydrogenase 97.8 0.00018 6.2E-09 76.1 13.1 221 91-342 28-292 (401)
231 3gt0_A Pyrroline-5-carboxylate 97.8 3.2E-05 1.1E-09 75.7 6.7 88 78-166 3-99 (247)
232 4a27_A Synaptic vesicle membra 97.7 7.5E-05 2.6E-09 76.7 9.7 101 61-166 128-240 (349)
233 3don_A Shikimate dehydrogenase 97.7 5E-05 1.7E-09 76.5 8.1 104 62-167 103-213 (277)
234 3phh_A Shikimate dehydrogenase 97.7 5.8E-05 2E-09 75.8 8.4 90 77-167 118-212 (269)
235 4dio_A NAD(P) transhydrogenase 97.7 8.7E-05 3E-09 78.6 10.0 228 91-349 46-322 (405)
236 3p2y_A Alanine dehydrogenase/p 97.7 0.00012 4E-09 77.0 10.7 218 91-342 43-302 (381)
237 3o8q_A Shikimate 5-dehydrogena 97.7 0.00011 3.9E-09 74.0 10.0 102 62-167 112-224 (281)
238 1f0y_A HCDH, L-3-hydroxyacyl-C 97.7 0.00011 3.8E-09 73.9 9.7 87 78-164 16-136 (302)
239 3tri_A Pyrroline-5-carboxylate 97.7 8.1E-05 2.8E-09 74.7 8.4 88 77-166 3-100 (280)
240 1i36_A Conserved hypothetical 97.7 8E-05 2.7E-09 73.1 8.1 86 79-167 2-91 (264)
241 2dvm_A Malic enzyme, 439AA lon 97.7 0.00025 8.4E-09 75.9 12.4 123 54-176 160-308 (439)
242 1yqg_A Pyrroline-5-carboxylate 97.7 6.5E-05 2.2E-09 73.6 7.3 85 79-166 2-90 (263)
243 2pv7_A T-protein [includes: ch 97.6 8.5E-05 2.9E-09 75.0 8.1 78 77-167 21-102 (298)
244 3ulk_A Ketol-acid reductoisome 97.6 0.00014 4.7E-09 77.5 9.7 92 73-166 33-133 (491)
245 2zyd_A 6-phosphogluconate dehy 97.6 7.3E-05 2.5E-09 80.9 7.8 92 75-167 13-116 (480)
246 3pwz_A Shikimate dehydrogenase 97.6 0.00035 1.2E-08 70.1 12.1 103 61-167 104-218 (272)
247 1bg6_A N-(1-D-carboxylethyl)-L 97.6 0.00014 4.6E-09 74.3 9.2 86 78-163 5-108 (359)
248 3gg2_A Sugar dehydrogenase, UD 97.6 0.00015 5.2E-09 77.8 9.6 89 78-166 3-124 (450)
249 2p4q_A 6-phosphogluconate dehy 97.6 0.00011 3.7E-09 79.9 8.2 90 77-167 10-112 (497)
250 3hdj_A Probable ornithine cycl 97.6 0.00029 9.9E-09 72.1 10.8 97 76-176 120-228 (313)
251 3u62_A Shikimate dehydrogenase 97.6 0.00014 4.9E-09 72.2 8.2 99 61-166 96-202 (253)
252 4gwg_A 6-phosphogluconate dehy 97.6 0.00011 3.9E-09 79.5 8.0 90 77-167 4-106 (484)
253 2ew2_A 2-dehydropantoate 2-red 97.6 0.00014 4.7E-09 72.6 8.1 89 78-166 4-110 (316)
254 1lss_A TRK system potassium up 97.6 0.00022 7.5E-09 62.2 8.5 85 77-161 4-100 (140)
255 1nvt_A Shikimate 5'-dehydrogen 97.6 0.00018 6.3E-09 72.2 9.0 103 62-166 114-232 (287)
256 2q3e_A UDP-glucose 6-dehydroge 97.5 0.00024 8.2E-09 76.4 10.2 90 78-167 6-134 (467)
257 1mv8_A GMD, GDP-mannose 6-dehy 97.5 0.0002 6.7E-09 76.3 9.4 88 79-166 2-125 (436)
258 1x7d_A Ornithine cyclodeaminas 97.5 0.0003 1E-08 73.1 10.5 99 75-176 127-241 (350)
259 2raf_A Putative dinucleotide-b 97.5 0.0001 3.5E-09 70.6 6.3 76 72-166 14-92 (209)
260 2izz_A Pyrroline-5-carboxylate 97.5 0.00014 4.8E-09 74.2 7.4 89 77-166 22-120 (322)
261 3ado_A Lambda-crystallin; L-gu 97.5 0.00076 2.6E-08 69.3 12.7 89 77-165 6-125 (319)
262 2iz1_A 6-phosphogluconate dehy 97.5 0.00014 4.7E-09 78.5 7.5 90 78-167 6-106 (474)
263 1jay_A Coenzyme F420H2:NADP+ o 97.5 0.00012 4.1E-09 69.4 6.2 85 79-166 2-99 (212)
264 1txg_A Glycerol-3-phosphate de 97.5 0.00026 9E-09 71.6 9.1 86 79-165 2-105 (335)
265 1omo_A Alanine dehydrogenase; 97.5 0.00053 1.8E-08 70.2 11.2 96 76-175 124-231 (322)
266 3tnl_A Shikimate dehydrogenase 97.5 0.00046 1.6E-08 70.8 10.6 104 61-167 139-266 (315)
267 2pgd_A 6-phosphogluconate dehy 97.5 0.00019 6.4E-09 77.6 8.1 90 78-167 3-104 (482)
268 3pid_A UDP-glucose 6-dehydroge 97.4 0.00037 1.3E-08 74.5 10.0 88 77-166 36-155 (432)
269 3k6j_A Protein F01G10.3, confi 97.4 0.00036 1.2E-08 75.1 9.5 87 78-165 55-168 (460)
270 3jyo_A Quinate/shikimate dehyd 97.4 0.00033 1.1E-08 70.7 8.3 102 62-167 113-232 (283)
271 1id1_A Putative potassium chan 97.4 0.00041 1.4E-08 62.5 8.1 67 77-143 3-82 (153)
272 3slk_A Polyketide synthase ext 97.4 0.0005 1.7E-08 78.8 10.5 90 74-167 343-445 (795)
273 3fbt_A Chorismate mutase and s 97.4 0.00081 2.8E-08 67.9 10.7 101 61-167 107-217 (282)
274 1z82_A Glycerol-3-phosphate de 97.4 0.00054 1.8E-08 69.9 9.6 87 77-166 14-113 (335)
275 4a7p_A UDP-glucose dehydrogena 97.3 0.00057 1.9E-08 73.3 10.1 90 77-166 8-131 (446)
276 2y0c_A BCEC, UDP-glucose dehyd 97.3 0.00045 1.5E-08 74.6 9.4 89 77-165 8-129 (478)
277 3mog_A Probable 3-hydroxybutyr 97.3 0.00029 9.9E-09 76.3 7.7 87 78-166 6-123 (483)
278 3g79_A NDP-N-acetyl-D-galactos 97.3 0.00077 2.6E-08 72.9 10.9 90 77-166 18-149 (478)
279 3k96_A Glycerol-3-phosphate de 97.3 0.00031 1.1E-08 73.0 7.4 90 77-166 29-135 (356)
280 3t4e_A Quinate/shikimate dehyd 97.3 0.00059 2E-08 69.9 8.8 104 62-167 134-260 (312)
281 1pgj_A 6PGDH, 6-PGDH, 6-phosph 97.3 0.00031 1E-08 75.9 6.8 89 79-167 3-106 (478)
282 4huj_A Uncharacterized protein 97.3 0.00038 1.3E-08 67.0 6.7 88 77-166 23-115 (220)
283 3ojo_A CAP5O; rossmann fold, c 97.2 0.00098 3.4E-08 71.2 10.3 92 75-166 9-131 (431)
284 1zcj_A Peroxisomal bifunctiona 97.2 0.00049 1.7E-08 74.0 7.9 84 78-162 38-148 (463)
285 3dfz_A SIRC, precorrin-2 dehyd 97.2 0.00052 1.8E-08 67.0 7.0 91 73-165 27-122 (223)
286 1dlj_A UDP-glucose dehydrogena 97.2 0.00064 2.2E-08 71.7 8.2 84 79-164 2-117 (402)
287 2vhw_A Alanine dehydrogenase; 97.2 0.00067 2.3E-08 71.0 8.2 218 91-342 21-268 (377)
288 1ks9_A KPA reductase;, 2-dehyd 97.1 0.00056 1.9E-08 67.4 6.9 88 79-166 2-99 (291)
289 3tum_A Shikimate dehydrogenase 97.1 0.0027 9.3E-08 63.6 11.7 105 61-166 110-227 (269)
290 3l9w_A Glutathione-regulated p 97.1 0.00056 1.9E-08 72.6 6.9 89 77-165 4-103 (413)
291 3aog_A Glutamate dehydrogenase 97.1 0.0027 9.4E-08 67.8 12.0 83 71-154 229-331 (440)
292 2o3j_A UDP-glucose 6-dehydroge 97.1 0.00098 3.3E-08 72.0 8.5 89 78-166 10-137 (481)
293 3l4b_C TRKA K+ channel protien 97.1 0.00078 2.7E-08 64.3 6.8 65 79-143 2-76 (218)
294 2rcy_A Pyrroline carboxylate r 97.1 0.00079 2.7E-08 65.8 6.9 60 77-142 4-68 (262)
295 1x0v_A GPD-C, GPDH-C, glycerol 97.0 0.00086 3E-08 68.5 7.3 88 77-166 8-126 (354)
296 4b79_A PA4098, probable short- 97.0 0.0012 4.3E-08 65.1 7.9 93 74-166 8-135 (242)
297 1evy_A Glycerol-3-phosphate de 97.0 0.00034 1.2E-08 72.2 3.9 86 79-166 17-126 (366)
298 2aef_A Calcium-gated potassium 97.0 0.0007 2.4E-08 65.3 5.8 85 76-162 8-103 (234)
299 2tmg_A Protein (glutamate dehy 97.0 0.0063 2.2E-07 64.6 13.4 83 71-154 203-306 (415)
300 3e8x_A Putative NAD-dependent 97.0 0.002 6.9E-08 61.5 8.8 70 73-142 17-94 (236)
301 1lu9_A Methylene tetrahydromet 97.0 0.0046 1.6E-07 61.7 11.7 81 62-142 104-198 (287)
302 3nv9_A Malic enzyme; rossmann 96.9 0.005 1.7E-07 65.8 12.2 123 54-176 193-339 (487)
303 4fgs_A Probable dehydrogenase 96.9 0.0018 6E-08 65.1 8.3 93 74-166 26-161 (273)
304 2eez_A Alanine dehydrogenase; 96.9 0.0011 3.7E-08 69.1 7.0 221 91-344 21-268 (369)
305 2z2v_A Hypothetical protein PH 96.9 0.00066 2.3E-08 70.8 5.0 90 74-165 13-109 (365)
306 3k92_A NAD-GDH, NAD-specific g 96.9 0.0049 1.7E-07 65.5 11.6 83 71-154 215-316 (424)
307 2dc1_A L-aspartate dehydrogena 96.9 0.0013 4.3E-08 63.9 6.7 79 79-165 2-82 (236)
308 4fs3_A Enoyl-[acyl-carrier-pro 96.9 0.0056 1.9E-07 60.0 11.2 41 74-114 3-46 (256)
309 3hwr_A 2-dehydropantoate 2-red 96.8 0.0027 9.2E-08 64.5 8.8 92 72-166 14-122 (318)
310 2qyt_A 2-dehydropantoate 2-red 96.8 0.0013 4.3E-08 65.9 6.3 86 78-166 9-119 (317)
311 3r6d_A NAD-dependent epimerase 96.8 0.0019 6.4E-08 61.1 7.0 90 77-166 5-109 (221)
312 1yj8_A Glycerol-3-phosphate de 96.8 0.00099 3.4E-08 69.1 5.4 87 78-166 22-143 (375)
313 4fcc_A Glutamate dehydrogenase 96.8 0.0055 1.9E-07 65.5 11.2 106 57-164 216-350 (450)
314 1wdk_A Fatty oxidation complex 96.8 0.0014 4.7E-08 74.3 6.9 87 77-164 314-430 (715)
315 2yfq_A Padgh, NAD-GDH, NAD-spe 96.8 0.0034 1.2E-07 66.8 9.2 95 71-167 206-325 (421)
316 3h2s_A Putative NADH-flavin re 96.7 0.0047 1.6E-07 58.0 9.1 64 79-142 2-72 (224)
317 2wtb_A MFP2, fatty acid multif 96.7 0.0021 7.3E-08 72.8 7.6 86 78-164 313-428 (725)
318 3aoe_E Glutamate dehydrogenase 96.7 0.0078 2.7E-07 63.9 11.4 91 71-164 212-319 (419)
319 1npy_A Hypothetical shikimate 96.6 0.0035 1.2E-07 62.8 7.8 88 76-167 118-216 (271)
320 1jw9_B Molybdopterin biosynthe 96.6 0.0021 7.2E-08 63.3 6.1 71 74-144 28-133 (249)
321 1pzg_A LDH, lactate dehydrogen 96.6 0.0058 2E-07 62.8 9.6 67 77-143 9-89 (331)
322 4fn4_A Short chain dehydrogena 96.6 0.0076 2.6E-07 59.7 10.1 68 74-141 4-93 (254)
323 3qvo_A NMRA family protein; st 96.6 0.0024 8.1E-08 61.3 6.1 91 76-166 22-126 (236)
324 2i76_A Hypothetical protein; N 96.6 0.00071 2.4E-08 67.3 2.5 85 79-166 4-91 (276)
325 1hdo_A Biliverdin IX beta redu 96.6 0.0056 1.9E-07 56.4 8.5 66 77-142 3-77 (206)
326 3e18_A Oxidoreductase; dehydro 96.6 0.0028 9.5E-08 65.5 7.0 83 78-161 6-93 (359)
327 3i83_A 2-dehydropantoate 2-red 96.6 0.0073 2.5E-07 61.2 9.8 87 78-166 3-107 (320)
328 1hyh_A L-hicdh, L-2-hydroxyiso 96.6 0.0052 1.8E-07 62.1 8.5 66 78-144 2-81 (309)
329 1v9l_A Glutamate dehydrogenase 96.5 0.0093 3.2E-07 63.4 10.6 83 72-155 205-313 (421)
330 3ew7_A LMO0794 protein; Q8Y8U8 96.5 0.012 4E-07 54.9 10.2 63 79-142 2-71 (221)
331 1pjq_A CYSG, siroheme synthase 96.5 0.003 1E-07 67.8 6.8 90 74-164 9-103 (457)
332 4hkt_A Inositol 2-dehydrogenas 96.5 0.0041 1.4E-07 63.1 7.5 83 78-161 4-91 (331)
333 2hjr_A Malate dehydrogenase; m 96.5 0.0075 2.6E-07 61.9 9.4 65 78-143 15-93 (328)
334 2axq_A Saccharopine dehydrogen 96.5 0.0039 1.3E-07 67.1 7.5 91 73-165 19-120 (467)
335 3ghy_A Ketopantoate reductase 96.5 0.0033 1.1E-07 64.2 6.5 85 78-166 4-106 (335)
336 4g81_D Putative hexonate dehyd 96.5 0.0083 2.8E-07 59.5 9.2 93 74-166 6-147 (255)
337 3c7a_A Octopine dehydrogenase; 96.5 0.0048 1.6E-07 64.4 7.9 84 78-163 3-115 (404)
338 3cea_A MYO-inositol 2-dehydrog 96.4 0.0051 1.7E-07 62.5 7.6 83 78-161 9-99 (346)
339 3tl2_A Malate dehydrogenase; c 96.4 0.013 4.3E-07 60.0 10.4 90 76-165 7-128 (315)
340 3euw_A MYO-inositol dehydrogen 96.4 0.0047 1.6E-07 63.0 7.2 83 78-161 5-93 (344)
341 1a5z_A L-lactate dehydrogenase 96.4 0.0098 3.4E-07 60.6 9.4 64 79-143 2-78 (319)
342 2v6b_A L-LDH, L-lactate dehydr 96.4 0.0049 1.7E-07 62.4 7.0 66 78-143 1-78 (304)
343 3oig_A Enoyl-[acyl-carrier-pro 96.4 0.015 5.3E-07 56.5 10.4 38 74-111 4-44 (266)
344 3vku_A L-LDH, L-lactate dehydr 96.3 0.013 4.6E-07 60.1 10.2 90 75-164 7-125 (326)
345 2ewd_A Lactate dehydrogenase,; 96.3 0.0072 2.5E-07 61.3 8.0 66 77-143 4-83 (317)
346 3pqe_A L-LDH, L-lactate dehydr 96.3 0.0085 2.9E-07 61.6 8.6 90 76-165 4-123 (326)
347 3ged_A Short-chain dehydrogena 96.3 0.015 5.1E-07 57.4 10.0 65 77-141 2-84 (247)
348 3hn2_A 2-dehydropantoate 2-red 96.3 0.012 4.1E-07 59.4 9.5 87 78-166 3-105 (312)
349 1ff9_A Saccharopine reductase; 96.3 0.0059 2E-07 65.3 7.6 88 76-164 2-99 (450)
350 1kyq_A Met8P, siroheme biosynt 96.3 0.0023 8E-08 64.3 4.1 91 73-164 9-140 (274)
351 2bma_A Glutamate dehydrogenase 96.3 0.012 4.2E-07 63.1 9.9 106 57-164 233-367 (470)
352 3fpf_A Mtnas, putative unchara 96.3 0.0068 2.3E-07 61.6 7.5 90 74-164 120-222 (298)
353 2vz8_A Fatty acid synthase; tr 96.3 0.0055 1.9E-07 78.2 8.3 102 62-166 1654-1772(2512)
354 3q2o_A Phosphoribosylaminoimid 96.2 0.0096 3.3E-07 61.8 8.5 68 73-140 10-83 (389)
355 1oju_A MDH, malate dehydrogena 96.2 0.015 5E-07 58.9 9.6 86 79-164 2-118 (294)
356 1lld_A L-lactate dehydrogenase 96.2 0.013 4.3E-07 59.1 9.1 67 77-143 7-86 (319)
357 3vtf_A UDP-glucose 6-dehydroge 96.2 0.0074 2.5E-07 64.6 7.6 66 78-143 22-108 (444)
358 3gvi_A Malate dehydrogenase; N 96.2 0.019 6.7E-07 58.8 10.4 67 76-142 6-85 (324)
359 3db2_A Putative NADPH-dependen 96.2 0.0057 2E-07 62.7 6.4 83 78-161 6-94 (354)
360 3p7m_A Malate dehydrogenase; p 96.2 0.021 7.3E-07 58.4 10.6 68 76-143 4-84 (321)
361 2bka_A CC3, TAT-interacting pr 96.2 0.0081 2.8E-07 57.2 7.0 68 75-142 16-94 (242)
362 3k31_A Enoyl-(acyl-carrier-pro 96.2 0.014 4.9E-07 58.2 9.1 39 73-111 26-67 (296)
363 3q2i_A Dehydrogenase; rossmann 96.2 0.0068 2.3E-07 62.1 6.8 83 78-161 14-103 (354)
364 3ego_A Probable 2-dehydropanto 96.2 0.0083 2.9E-07 60.6 7.4 85 78-166 3-101 (307)
365 2glx_A 1,5-anhydro-D-fructose 96.1 0.0088 3E-07 60.4 7.4 82 79-161 2-90 (332)
366 3r3j_A Glutamate dehydrogenase 96.1 0.023 8E-07 60.7 10.9 104 57-162 220-352 (456)
367 3zwc_A Peroxisomal bifunctiona 96.1 0.011 3.7E-07 67.2 8.8 88 78-165 317-431 (742)
368 3lk7_A UDP-N-acetylmuramoylala 96.1 0.011 3.8E-07 62.9 8.4 69 74-142 6-82 (451)
369 2ho3_A Oxidoreductase, GFO/IDH 96.1 0.011 3.7E-07 59.8 7.7 82 79-161 3-90 (325)
370 3ius_A Uncharacterized conserv 96.1 0.0091 3.1E-07 58.4 6.9 66 77-142 5-73 (286)
371 3ijr_A Oxidoreductase, short c 96.0 0.027 9.3E-07 56.0 10.5 39 74-112 44-83 (291)
372 2h7i_A Enoyl-[acyl-carrier-pro 96.0 0.0092 3.2E-07 58.5 6.9 38 75-112 5-45 (269)
373 4h15_A Short chain alcohol deh 96.0 0.014 4.8E-07 57.9 8.2 68 74-141 8-87 (261)
374 3ldh_A Lactate dehydrogenase; 96.0 0.019 6.3E-07 59.2 9.3 88 76-164 20-138 (330)
375 4eso_A Putative oxidoreductase 96.0 0.018 6.1E-07 56.2 8.8 93 74-166 5-140 (255)
376 1gq2_A Malic enzyme; oxidoredu 96.0 0.037 1.3E-06 60.2 11.8 122 54-176 256-409 (555)
377 3nep_X Malate dehydrogenase; h 96.0 0.02 6.8E-07 58.5 9.2 86 79-164 2-118 (314)
378 3bio_A Oxidoreductase, GFO/IDH 96.0 0.008 2.7E-07 60.8 6.1 80 78-162 10-94 (304)
379 3c1a_A Putative oxidoreductase 96.0 0.0068 2.3E-07 61.1 5.6 82 78-161 11-97 (315)
380 3uuw_A Putative oxidoreductase 95.9 0.0081 2.8E-07 60.3 6.0 83 78-161 7-94 (308)
381 1xea_A Oxidoreductase, GFO/IDH 95.9 0.0075 2.5E-07 61.0 5.8 82 79-161 4-92 (323)
382 1ldn_A L-lactate dehydrogenase 95.9 0.01 3.5E-07 60.4 6.8 67 77-143 6-85 (316)
383 4g65_A TRK system potassium up 95.9 0.0082 2.8E-07 64.4 6.4 66 77-142 3-78 (461)
384 1bgv_A Glutamate dehydrogenase 95.9 0.014 4.9E-07 62.4 8.1 93 71-164 224-345 (449)
385 3ezy_A Dehydrogenase; structur 95.9 0.0081 2.8E-07 61.3 6.1 82 79-161 4-92 (344)
386 1t2d_A LDH-P, L-lactate dehydr 95.9 0.009 3.1E-07 61.1 6.1 66 77-143 4-83 (322)
387 3orq_A N5-carboxyaminoimidazol 95.9 0.014 4.7E-07 60.6 7.7 39 73-111 8-46 (377)
388 3r7f_A Aspartate carbamoyltran 95.9 0.08 2.7E-06 53.9 13.0 120 34-165 110-251 (304)
389 1o0s_A NAD-ME, NAD-dependent m 95.9 0.037 1.3E-06 60.6 11.1 122 54-176 294-447 (605)
390 3grk_A Enoyl-(acyl-carrier-pro 95.9 0.02 6.9E-07 57.1 8.6 38 74-111 28-68 (293)
391 3rc1_A Sugar 3-ketoreductase; 95.8 0.012 4.2E-07 60.3 7.0 83 78-161 28-117 (350)
392 3pxx_A Carveol dehydrogenase; 95.8 0.029 1E-06 55.0 9.3 36 74-109 7-43 (287)
393 1hxh_A 3BETA/17BETA-hydroxyste 95.8 0.017 5.7E-07 56.1 7.3 41 74-114 3-44 (253)
394 4aj2_A L-lactate dehydrogenase 95.8 0.021 7.3E-07 58.7 8.4 90 75-165 17-137 (331)
395 4hp8_A 2-deoxy-D-gluconate 3-d 95.7 0.027 9.4E-07 55.6 8.8 69 73-141 5-88 (247)
396 1f06_A MESO-diaminopimelate D- 95.7 0.012 4.1E-07 59.9 6.3 80 79-162 5-87 (320)
397 3dhn_A NAD-dependent epimerase 95.7 0.019 6.5E-07 54.0 7.3 64 78-142 5-77 (227)
398 1pg5_A Aspartate carbamoyltran 95.7 0.082 2.8E-06 53.7 12.3 130 34-173 112-269 (299)
399 1guz_A Malate dehydrogenase; o 95.7 0.024 8.3E-07 57.4 8.4 64 79-143 2-80 (310)
400 1zk4_A R-specific alcohol dehy 95.7 0.03 1E-06 53.6 8.6 41 74-114 3-44 (251)
401 3e82_A Putative oxidoreductase 95.7 0.018 6.3E-07 59.3 7.5 82 78-161 8-95 (364)
402 2pd4_A Enoyl-[acyl-carrier-pro 95.7 0.018 6E-07 56.6 7.1 37 75-111 4-43 (275)
403 3tzq_B Short-chain type dehydr 95.7 0.03 1E-06 55.0 8.7 69 74-142 8-95 (271)
404 2i6u_A Otcase, ornithine carba 95.7 0.12 4E-06 52.7 13.3 100 74-173 145-276 (307)
405 3e9m_A Oxidoreductase, GFO/IDH 95.7 0.011 3.6E-07 60.2 5.6 82 78-160 6-94 (330)
406 3gvc_A Oxidoreductase, probabl 95.7 0.03 1E-06 55.4 8.8 69 74-142 26-113 (277)
407 3v2g_A 3-oxoacyl-[acyl-carrier 95.7 0.053 1.8E-06 53.4 10.5 38 73-110 27-65 (271)
408 3oh8_A Nucleoside-diphosphate 95.7 0.041 1.4E-06 59.3 10.5 95 46-142 115-211 (516)
409 2dtx_A Glucose 1-dehydrogenase 95.6 0.025 8.4E-07 55.5 8.0 69 74-142 5-84 (264)
410 1nvm_B Acetaldehyde dehydrogen 95.6 0.009 3.1E-07 60.9 4.9 84 78-162 5-102 (312)
411 1zud_1 Adenylyltransferase THI 95.6 0.01 3.5E-07 58.4 5.2 37 74-110 25-62 (251)
412 1y81_A Conserved hypothetical 95.6 0.024 8.2E-07 50.8 7.1 87 74-166 11-104 (138)
413 2wyu_A Enoyl-[acyl carrier pro 95.6 0.014 4.9E-07 56.8 6.1 38 74-111 5-45 (261)
414 3evn_A Oxidoreductase, GFO/IDH 95.6 0.016 5.3E-07 58.8 6.6 83 78-161 6-95 (329)
415 3mz0_A Inositol 2-dehydrogenas 95.6 0.02 6.7E-07 58.4 7.2 82 79-161 4-94 (344)
416 1g0o_A Trihydroxynaphthalene r 95.6 0.029 1E-06 55.2 8.3 39 74-112 26-65 (283)
417 1lnq_A MTHK channels, potassiu 95.5 0.011 3.6E-07 60.2 5.1 83 77-161 115-208 (336)
418 4dry_A 3-oxoacyl-[acyl-carrier 95.5 0.022 7.5E-07 56.5 7.3 42 73-114 29-71 (281)
419 3abi_A Putative uncharacterize 95.5 0.025 8.6E-07 58.3 8.0 86 77-165 16-109 (365)
420 3kkj_A Amine oxidase, flavin-c 95.5 0.0094 3.2E-07 54.7 4.3 32 79-110 4-35 (336)
421 3uce_A Dehydrogenase; rossmann 95.5 0.02 6.8E-07 54.3 6.6 83 75-166 4-118 (223)
422 2a4k_A 3-oxoacyl-[acyl carrier 95.5 0.021 7.3E-07 55.9 7.0 41 75-115 4-45 (263)
423 2gdz_A NAD+-dependent 15-hydro 95.5 0.031 1E-06 54.5 8.1 40 74-113 4-44 (267)
424 1xq6_A Unknown protein; struct 95.5 0.04 1.4E-06 52.2 8.7 66 76-142 3-79 (253)
425 3d0o_A L-LDH 1, L-lactate dehy 95.5 0.038 1.3E-06 56.3 9.0 88 77-164 6-123 (317)
426 1ur5_A Malate dehydrogenase; o 95.5 0.031 1.1E-06 56.6 8.4 65 78-143 3-81 (309)
427 1pvv_A Otcase, ornithine carba 95.5 0.15 5.2E-06 52.1 13.4 100 74-173 152-282 (315)
428 2p91_A Enoyl-[acyl-carrier-pro 95.5 0.033 1.1E-06 55.0 8.3 37 75-111 19-58 (285)
429 2yvl_A TRMI protein, hypotheti 95.5 0.035 1.2E-06 52.9 8.3 88 75-165 90-191 (248)
430 1tlt_A Putative oxidoreductase 95.4 0.018 6.3E-07 57.9 6.5 83 78-161 6-93 (319)
431 3ruf_A WBGU; rossmann fold, UD 95.4 0.045 1.5E-06 55.0 9.4 68 75-142 23-110 (351)
432 1vlv_A Otcase, ornithine carba 95.4 0.15 5.2E-06 52.3 13.2 100 74-173 164-296 (325)
433 1xhl_A Short-chain dehydrogena 95.4 0.036 1.2E-06 55.4 8.5 40 75-114 24-64 (297)
434 3kux_A Putative oxidoreductase 95.4 0.025 8.4E-07 57.9 7.4 82 78-161 8-95 (352)
435 1pj3_A NAD-dependent malic enz 95.4 0.068 2.3E-06 58.4 11.0 123 54-176 258-414 (564)
436 3ak4_A NADH-dependent quinucli 95.4 0.043 1.5E-06 53.3 8.7 41 74-114 9-50 (263)
437 3e48_A Putative nucleoside-dip 95.4 0.028 9.5E-07 55.0 7.3 64 79-142 2-75 (289)
438 3orf_A Dihydropteridine reduct 95.4 0.031 1.1E-06 54.1 7.6 66 75-141 20-96 (251)
439 3csu_A Protein (aspartate carb 95.4 0.17 5.9E-06 51.6 13.3 130 34-173 116-276 (310)
440 2ef0_A Ornithine carbamoyltran 95.4 0.15 5.2E-06 51.7 12.8 100 74-173 151-272 (301)
441 3ec7_A Putative dehydrogenase; 95.3 0.023 7.9E-07 58.4 6.9 83 78-161 24-115 (357)
442 3g17_A Similar to 2-dehydropan 95.3 0.0064 2.2E-07 60.9 2.6 87 78-166 3-98 (294)
443 3mw9_A GDH 1, glutamate dehydr 95.3 0.073 2.5E-06 57.5 10.9 80 74-155 241-340 (501)
444 1uzm_A 3-oxoacyl-[acyl-carrier 95.3 0.023 7.8E-07 55.0 6.5 69 74-142 12-91 (247)
445 1ez4_A Lactate dehydrogenase; 95.3 0.025 8.6E-07 57.7 7.1 67 77-143 5-83 (318)
446 2o7s_A DHQ-SDH PR, bifunctiona 95.3 0.018 6.1E-07 62.7 6.2 68 74-141 361-433 (523)
447 4e4t_A Phosphoribosylaminoimid 95.3 0.024 8.1E-07 59.9 7.0 66 74-139 32-103 (419)
448 1mld_A Malate dehydrogenase; o 95.3 0.063 2.2E-06 54.6 9.9 64 79-143 2-79 (314)
449 1qsg_A Enoyl-[acyl-carrier-pro 95.3 0.033 1.1E-06 54.2 7.6 36 75-110 7-45 (265)
450 3fi9_A Malate dehydrogenase; s 95.3 0.017 5.8E-07 59.8 5.7 69 75-143 6-87 (343)
451 1dxh_A Ornithine carbamoyltran 95.3 0.14 4.8E-06 52.7 12.4 100 67-166 145-276 (335)
452 1y1p_A ARII, aldehyde reductas 95.3 0.038 1.3E-06 54.9 8.1 69 74-142 8-93 (342)
453 3eag_A UDP-N-acetylmuramate:L- 95.3 0.064 2.2E-06 54.6 9.8 67 77-143 4-77 (326)
454 3qy9_A DHPR, dihydrodipicolina 95.3 0.028 9.5E-07 55.4 6.8 76 78-162 4-81 (243)
455 1ydw_A AX110P-like protein; st 95.2 0.037 1.3E-06 56.8 8.0 83 78-161 7-99 (362)
456 3r3s_A Oxidoreductase; structu 95.2 0.092 3.2E-06 52.2 10.6 37 74-110 46-83 (294)
457 2q2v_A Beta-D-hydroxybutyrate 95.2 0.071 2.4E-06 51.5 9.5 37 75-111 2-39 (255)
458 3m2t_A Probable dehydrogenase; 95.2 0.022 7.7E-07 58.6 6.2 83 78-161 6-96 (359)
459 2c5a_A GDP-mannose-3', 5'-epim 95.2 0.045 1.5E-06 56.1 8.4 68 75-142 27-103 (379)
460 4had_A Probable oxidoreductase 95.1 0.029 1E-06 57.0 6.9 81 79-160 25-113 (350)
461 1duv_G Octase-1, ornithine tra 95.1 0.15 5.2E-06 52.4 12.2 92 74-165 152-275 (333)
462 3t4x_A Oxidoreductase, short c 95.1 0.051 1.8E-06 53.1 8.4 42 73-114 6-48 (267)
463 2zqz_A L-LDH, L-lactate dehydr 95.1 0.03 1E-06 57.4 6.8 68 76-143 8-87 (326)
464 2wm3_A NMRA-like family domain 95.1 0.049 1.7E-06 53.6 8.2 65 77-141 5-81 (299)
465 3dfu_A Uncharacterized protein 95.1 0.029 9.9E-07 55.0 6.3 68 77-164 6-75 (232)
466 3p19_A BFPVVD8, putative blue 95.1 0.04 1.4E-06 54.1 7.4 69 74-142 13-97 (266)
467 3gpi_A NAD-dependent epimerase 95.1 0.018 6.1E-07 56.4 4.8 62 76-141 2-72 (286)
468 3dqp_A Oxidoreductase YLBE; al 95.1 0.025 8.5E-07 53.2 5.6 62 79-142 2-73 (219)
469 1ml4_A Aspartate transcarbamoy 95.1 0.2 7E-06 50.9 12.7 126 36-171 120-275 (308)
470 2czc_A Glyceraldehyde-3-phosph 95.0 0.045 1.5E-06 56.1 7.9 83 79-162 4-108 (334)
471 3rft_A Uronate dehydrogenase; 95.0 0.022 7.4E-07 55.6 5.3 64 76-142 2-74 (267)
472 2dkn_A 3-alpha-hydroxysteroid 95.0 0.022 7.7E-07 54.2 5.3 63 78-142 2-72 (255)
473 1wma_A Carbonyl reductase [NAD 95.0 0.039 1.3E-06 53.1 7.1 38 76-113 3-42 (276)
474 4id9_A Short-chain dehydrogena 95.0 0.033 1.1E-06 55.9 6.8 64 73-142 15-87 (347)
475 1b7g_O Protein (glyceraldehyde 95.0 0.05 1.7E-06 56.1 8.2 85 79-165 3-109 (340)
476 3ai3_A NADPH-sorbose reductase 95.0 0.059 2E-06 52.3 8.3 41 74-114 4-45 (263)
477 1y6j_A L-lactate dehydrogenase 95.0 0.025 8.4E-07 57.7 5.7 67 77-143 7-85 (318)
478 3is3_A 17BETA-hydroxysteroid d 95.0 0.069 2.4E-06 52.2 8.8 38 74-111 15-53 (270)
479 2x4g_A Nucleoside-diphosphate- 95.0 0.066 2.2E-06 53.4 8.8 65 78-142 14-87 (342)
480 2gas_A Isoflavone reductase; N 95.0 0.041 1.4E-06 54.1 7.1 66 77-142 2-86 (307)
481 3upl_A Oxidoreductase; rossman 94.9 0.031 1E-06 59.8 6.5 85 78-162 24-137 (446)
482 3gdo_A Uncharacterized oxidore 94.9 0.032 1.1E-06 57.3 6.5 82 78-161 6-93 (358)
483 2pzm_A Putative nucleotide sug 94.9 0.054 1.9E-06 54.2 8.1 70 73-142 16-98 (330)
484 2gn4_A FLAA1 protein, UDP-GLCN 94.9 0.055 1.9E-06 55.0 8.2 69 74-142 18-101 (344)
485 1sb8_A WBPP; epimerase, 4-epim 94.9 0.06 2E-06 54.3 8.4 69 74-142 24-112 (352)
486 3d3w_A L-xylulose reductase; u 94.9 0.055 1.9E-06 51.6 7.7 41 74-114 4-45 (244)
487 2x0j_A Malate dehydrogenase; o 94.9 0.093 3.2E-06 53.1 9.6 64 79-142 2-79 (294)
488 2o23_A HADH2 protein; HSD17B10 94.9 0.062 2.1E-06 51.8 8.0 41 74-114 9-50 (265)
489 3uxy_A Short-chain dehydrogena 94.8 0.029 9.8E-07 55.2 5.7 69 74-142 25-104 (266)
490 3rui_A Ubiquitin-like modifier 94.8 0.051 1.8E-06 56.1 7.7 37 74-110 31-68 (340)
491 4e6p_A Probable sorbitol dehyd 94.8 0.053 1.8E-06 52.7 7.5 42 74-115 5-47 (259)
492 1fjh_A 3alpha-hydroxysteroid d 94.8 0.029 9.8E-07 54.0 5.5 64 78-143 2-73 (257)
493 2jl1_A Triphenylmethane reduct 94.8 0.025 8.6E-07 55.1 5.1 65 78-142 1-76 (287)
494 2p2s_A Putative oxidoreductase 94.8 0.041 1.4E-06 55.8 6.8 83 78-161 5-95 (336)
495 3ek2_A Enoyl-(acyl-carrier-pro 94.8 0.059 2E-06 52.1 7.7 39 73-111 10-51 (271)
496 1uls_A Putative 3-oxoacyl-acyl 94.8 0.072 2.5E-06 51.3 8.3 68 75-142 3-87 (245)
497 1cyd_A Carbonyl reductase; sho 94.8 0.062 2.1E-06 51.1 7.7 41 74-114 4-45 (244)
498 1hdc_A 3-alpha, 20 beta-hydrox 94.8 0.056 1.9E-06 52.4 7.5 40 75-114 3-43 (254)
499 3r1i_A Short-chain type dehydr 94.8 0.077 2.6E-06 52.4 8.6 41 74-114 29-70 (276)
500 2q1s_A Putative nucleotide sug 94.7 0.067 2.3E-06 54.7 8.3 69 74-142 29-109 (377)
No 1
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=2.7e-68 Score=565.95 Aligned_cols=259 Identities=56% Similarity=0.944 Sum_probs=249.2
Q ss_pred cccccceeecCchhhhHHHHhHHHHHHHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhh
Q psy4626 35 GKLTVPAMNVNDSVTKTKFDNLYMCRESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICAL 114 (542)
Q Consensus 35 ~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~ 114 (542)
|.|.+||++||||++|++|||+|||++|++++++|+++..+.|++|+|+|+|+||+.+|++|+++||+|+++|++|.+..
T Consensus 205 g~L~~PvinVnds~tK~~fDn~yG~~eslvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~ 284 (464)
T 3n58_A 205 GLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICAL 284 (464)
T ss_dssp TCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred CCCCCCEEeeccHhhhhhhhhhhcchHHHHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhh
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhhcCCceeeCHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEec
Q psy4626 115 QACMDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIW 194 (542)
Q Consensus 115 ~A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~ 194 (542)
++.+.|+++++++++++.+|+|++++|++++|+.++|+.||+|++++|+||++.|+|.++|.. .++.+++++++.|.+
T Consensus 285 ~A~~~G~~vv~LeElL~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgdvEID~~aL~~--~~~~~ik~~v~~~~~ 362 (464)
T 3n58_A 285 QAAMDGFEVVTLDDAASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN--LKWTNVKPQVDLIEF 362 (464)
T ss_dssp HHHHTTCEECCHHHHGGGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSSTTTBTCGGGTT--SEEEEEETTEEEEEC
T ss_pred HHHhcCceeccHHHHHhhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCCcccCHHHHHh--CccccccCCeeEEEe
Confidence 888999999999999999999999999999999999999999999999999999999999984 677889999999999
Q ss_pred CCCCEEEEecCCCcccccCCC-ChhHHHhhHHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCccccccccc
Q psy4626 195 PDGKRIVLLAEGRLVNLSCSS-LPSFVVSITACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDAHLTEL 273 (542)
Q Consensus 195 ~dg~~I~LLa~GrLvnl~~~t-hp~~vmd~sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~~i~~l 273 (542)
|||+.|+||++|||+||+|++ ||+++||+||++|+|++++||+++ ++|+++||.||+++|++||++||++||++||+|
T Consensus 363 ~~g~~i~lLaeGrlvNL~~a~GhP~~vm~~sf~~Q~la~~~l~~~~-~~~~~~v~~lP~~lDe~VA~l~L~~~g~~l~~l 441 (464)
T 3n58_A 363 PDGKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTRT-DAYKNEVYVLPKHLDEKVARLHLDKLGAKLTVL 441 (464)
T ss_dssp TTSCEEEEEGGGSBHHHHHSCCSCHHHHHHHHHHHHHHHHHHHHSG-GGCCSSEECCCHHHHHHHHHHHHGGGTCCCCCC
T ss_pred CCCCEEEEEeCCceecccCCCCChHHHHhHHHHHHHHHHHHHHhCc-cccCCCeeECCHHHHHHHHHHHHHHcCCEeccC
Confidence 999999999999999999995 999999999999999999999998 789999999999999999999999999999999
Q ss_pred cHHHHhhcCCCCCCCCCCCcccc
Q psy4626 274 SDEQAKYMGLNKAGPFKPSYYSM 296 (542)
Q Consensus 274 t~~~a~~lg~~e~~p~~a~ea~m 296 (542)
|++|++|||+|..+|||...+++
T Consensus 442 t~~Q~~yl~~~~~gp~k~~~yry 464 (464)
T 3n58_A 442 SEEQAAYIGVTPQGPFKSEHYRY 464 (464)
T ss_dssp CHHHHHHHTCCTTSCCSCTTCCC
T ss_pred CHHHHHHcCCCCCCCCCCccCCC
Confidence 99999999999999999987653
No 2
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=100.00 E-value=2.1e-66 Score=550.91 Aligned_cols=291 Identities=83% Similarity=1.354 Sum_probs=280.8
Q ss_pred CccHHHHHHHhCCCCCCCCceeeceecccHHhh-----------------------------------------------
Q psy4626 1 MPGIMALRKRAGDDKPLKNARIVGCTHINAQTA----------------------------------------------- 33 (542)
Q Consensus 1 MP~l~~l~~~~~~~~pl~G~~i~~~lh~~~~tA----------------------------------------------- 33 (542)
||+|+++|++|+.+|||+|.||++|+|+|+|||
T Consensus 36 mp~l~~~r~~~~~~~pl~G~ri~~~lH~~~~Ta~l~~tL~~~GA~v~~~~~n~~stqd~~aaal~~~gi~v~a~~g~~~~ 115 (435)
T 3gvp_A 36 MPALMALRKRAQGEKPLAGAKIVGCTHITAQTAVLMETLGALGAQCRWAACNIYSTLNEVAAALAESGFPVFAWKGESED 115 (435)
T ss_dssp CHHHHHHHHHHSTTCTTTTCEEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSCCCHHHHHHHHHHTCCEECCTTCCHH
T ss_pred CHHHHHHHHHHhccCCCCCCEEEEEEccHHHHHHHHHHHHHCCCEEEEEecCCCcChHHHHHHHHhcCCeEEEecCCCHH
Confidence 999999999999999999999999999999998
Q ss_pred -------------------------------------------------------------hcccccceeecCchhhhHH
Q psy4626 34 -------------------------------------------------------------AGKLTVPAMNVNDSVTKTK 52 (542)
Q Consensus 34 -------------------------------------------------------------~~~L~~PV~~vn~s~~K~~ 52 (542)
+|.|.+||++||||++|++
T Consensus 116 ey~~~~~~~~~~~~~~p~~ilDdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~vnds~tK~~ 195 (435)
T 3gvp_A 116 DFWWCIDRCVNVEGWQPNMILDDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQK 195 (435)
T ss_dssp HHHHHHHHHHCBTTBCCSEEEESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEECTTCHHHHH
T ss_pred HHHHHHHHHHhccCCCCcEEEecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEEecchhhhhh
Confidence 5689999999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcC
Q psy4626 53 FDNLYMCRESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRT 132 (542)
Q Consensus 53 fd~~~g~~~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~ 132 (542)
|||+|||++|++++++|+++..+.|++|+|+|||+||+.+|+.|+++|++|+++|++|.+..+|.+.|+.+.++++++++
T Consensus 196 fDn~yGt~~s~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ 275 (435)
T 3gvp_A 196 FDNLYCCRESILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQ 275 (435)
T ss_dssp HHTHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTT
T ss_pred hhhhhhhHHHHHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhc
Confidence 99999999999999999998899999999999999999999999999999999999999988888999999999999999
Q ss_pred CcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCCccccc
Q psy4626 133 VDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLS 212 (542)
Q Consensus 133 aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLvnl~ 212 (542)
+|+||+|+|++++|+.++|+.||+|++++|+||++.|+|++++.....+..+++++++.|.+++|+.|+||++||++||+
T Consensus 276 ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~EId~~~L~~~~~~~~~ir~~v~~y~~~dg~~I~LLAeGrLvNl~ 355 (435)
T 3gvp_A 276 VDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLRTPELTWERVRSQVDHVIWPDGKRIVLLAEGRLLNLS 355 (435)
T ss_dssp CSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTTTBTGGGGCSTTCEEEEEETTEEEEECTTSCEEEEEGGGSBHHHH
T ss_pred CCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCccCCHHHHHhhcceeEEEEcCeeeEEcCCCcEEEEecCCCEeeec
Confidence 99999999999999999999999999999999999999999997666777889999999999999999999999999999
Q ss_pred CCCChhHHHhhHHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCccccccccccHHHHhhcCCCCCCCCCC
Q psy4626 213 CSSLPSFVVSITACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDAHLTELSDEQAKYMGLNKAGPFKP 291 (542)
Q Consensus 213 ~~thp~~vmd~sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~~i~~lt~~~a~~lg~~e~~p~~a 291 (542)
|++||+++||+||++|+|+++|||+++.++|+++||.||+++|++||++||++||++||+||++|++|||+|+.+|||.
T Consensus 356 ~~~hp~~vm~~sf~~q~la~~~l~~~~~~~~~~~v~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~~~g~~k~ 434 (435)
T 3gvp_A 356 CSTVPTFVLSITATTQALALIELYNAPEGRYKQDVYLLPKKMDEYVASLHLPTFDAHLTELTDEQAKYLGLNKNGPFKP 434 (435)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHHHHHCCTTTSCSSEEECCHHHHHHHHHHHGGGGTCCCCCCCHHHHHHHTCCTTCCCSC
T ss_pred CCCCcHHHHhHHHHHHHHHHHHHHhCcccccCCCeeeCCHHHHHHHHHHHHHhcCCEeccCCHHHHHHcCCCCCCCCCC
Confidence 9999999999999999999999999863589999999999999999999999999999999999999999999999996
No 3
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=100.00 E-value=1e-63 Score=531.57 Aligned_cols=296 Identities=53% Similarity=0.925 Sum_probs=283.1
Q ss_pred CccHHHHHHHhCCCCCCCCceeeceecccHHhh-----------------------------------------------
Q psy4626 1 MPGIMALRKRAGDDKPLKNARIVGCTHINAQTA----------------------------------------------- 33 (542)
Q Consensus 1 MP~l~~l~~~~~~~~pl~G~~i~~~lh~~~~tA----------------------------------------------- 33 (542)
||+|+++|++|+.+|||+|.||++|+|+|+|||
T Consensus 25 mp~l~~~r~~~~~~~pl~g~ri~~~lh~~~~Ta~l~~tL~~~GA~v~~~~~n~~stqd~~aaal~~~gi~v~a~~ge~~~ 104 (436)
T 3h9u_A 25 MPGLMELRREYGPSKPLKGAKIAGCLHMTMQTAVLIETLVELGAEVRWASCNIFSTQDHAAAAIAKRGIPVFAWKGETEE 104 (436)
T ss_dssp CHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTTCCHHHHHHHHHTTCCEEECTTCCHH
T ss_pred CHHHHHHHHHHhccCCCCCCEEEEEeccHHHHHHHHHHHHHcCCEEEEecCCCCCCcHHHHHHHHhcCCeEEEeCCCCHH
Confidence 999999999999999999999999999999998
Q ss_pred ---------------------------------------------------------------hcccccceeecCchhhh
Q psy4626 34 ---------------------------------------------------------------AGKLTVPAMNVNDSVTK 50 (542)
Q Consensus 34 ---------------------------------------------------------------~~~L~~PV~~vn~s~~K 50 (542)
++.|.+||++||+|++|
T Consensus 105 ey~~~~~~~l~~~~~~~~p~~ilDdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPVinvndsvtk 184 (436)
T 3h9u_A 105 EYMWCMKQTLKGFSGDGYPNMLLDDGGDLTNYVLDECKELDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTK 184 (436)
T ss_dssp HHHHHHHHTTSCBTTTBCCSEEEESSSHHHHHHHHHC-CCTTTCCCEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHH
T ss_pred HHHHHHHHHHHhcccCCCCceEeccccHHHHHHHHHhHHHHhhccceeeccCcChHHHHHHHHcCCCCCceEeechhhhh
Confidence 34688999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHh
Q psy4626 51 TKFDNLYMCRESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVI 130 (542)
Q Consensus 51 ~~fd~~~g~~~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l 130 (542)
+.||+.|||+++++++++++++..+.|++|+|+|+|+||+.+|+.|+++|++|+++|++|.+..++.+.|+.+.++++++
T Consensus 185 ~~~Dn~~Gt~~slldgi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal 264 (436)
T 3h9u_A 185 SKFDNLYGCRESLVDGIKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVV 264 (436)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHT
T ss_pred hhhhccccchHHHHHHHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888889999999999999
Q ss_pred cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCCccc
Q psy4626 131 RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVN 210 (542)
Q Consensus 131 ~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLvn 210 (542)
+++|+|+.+++++++++.+.|+.||+|++++|+||++.|||+++|...++++.+++++++.|.++||+.|+||++||++|
T Consensus 265 ~~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~~~~~~~ir~~vd~y~~~dg~~I~LLaeGrLvN 344 (436)
T 3h9u_A 265 EEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKANAKERVEVKPQVDRYTMANGRHIILLAEGRLVN 344 (436)
T ss_dssp TTCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSSSGGGBCHHHHHHHCSEEEEEETTEEEEECTTSCEEEEEGGGSCHH
T ss_pred hhCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCCCCCccCHHHHHhhcCceEeecCCceEEEcCCCCEEEEecCCCeec
Confidence 99999999999999999999999999999999999999999999988788888999999999999999999999999999
Q ss_pred ccCCC-ChhHHHhhHHHHHHHHHHHHhcCCC-CCCCCc----cccCChhhHHHHHHhcCCccccccccccHHHHhhcCCC
Q psy4626 211 LSCSS-LPSFVVSITACTQALALIELFNAPS-GRYKSD----VYLLPKKMDEYVASLHLPTFDAHLTELSDEQAKYMGLN 284 (542)
Q Consensus 211 l~~~t-hp~~vmd~sfa~q~la~~~L~~~~~-~~~~~g----v~~lp~~~d~~VA~l~L~~lg~~i~~lt~~~a~~lg~~ 284 (542)
|+|++ ||+++||+||++|+|++++||+++. ++|+++ ||.||+++|++||++||++||++||+||++|++|||+|
T Consensus 345 l~~~~Ghp~~vm~~sf~~q~la~~~l~~~~~~~~~~~~~~~~v~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~ 424 (436)
T 3h9u_A 345 LGCASGHPSFVMSNSFCNQVLAQIELWTNRDTGKYPRGAKAQVYFLPKKLDEKVAALHLGKLGAKLTKLTPKQAEYINCP 424 (436)
T ss_dssp HHHSCCSCHHHHHHHHHHHHHHHHHHHHTTTTTSSCC---CCEEECCHHHHHHHHHHHHHHHTCCCCCCCHHHHHHTTSC
T ss_pred ccCCCCChHHHhhHHHHHHHHHHHHHHhCCCcccCCCCCCceeeeCCHHHHHHHHHHHHHHcCCccccCCHHHHHhcCCC
Confidence 99995 9999999999999999999999972 389999 99999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccc
Q psy4626 285 KAGPFKPSYYSM 296 (542)
Q Consensus 285 e~~p~~a~ea~m 296 (542)
+.+|||...+++
T Consensus 425 ~~g~~~~~~~~~ 436 (436)
T 3h9u_A 425 VDGPFKPDHYRY 436 (436)
T ss_dssp TTCCCSCTTCCC
T ss_pred cCCCCCcccCCC
Confidence 999999987653
No 4
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=100.00 E-value=6.6e-55 Score=470.03 Aligned_cols=261 Identities=51% Similarity=0.876 Sum_probs=242.2
Q ss_pred ccccceeecCchhhhHHHHhHHHHHHHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhh
Q psy4626 36 KLTVPAMNVNDSVTKTKFDNLYMCRESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQ 115 (542)
Q Consensus 36 ~L~~PV~~vn~s~~K~~fd~~~g~~~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~ 115 (542)
.|.+||++|||+.+|++|||+|||++|++++++|.++..+.|++|+|+|+|.||+++|+.|+++|++|+++|++|.++.+
T Consensus 224 ~L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~ 303 (488)
T 3ond_A 224 TLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 303 (488)
T ss_dssp CCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCCCceecccchhhhhHhhhhccccHHHHHHHHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 37899999999999999999999999999999999888899999999999999999999999999999999999999888
Q ss_pred hhcCCceeeCHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCC-CcceeeeccceeeEec
Q psy4626 116 ACMDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTP-DLTWEKVRSQVDHVIW 194 (542)
Q Consensus 116 A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~-~l~v~~~~~~v~~y~~ 194 (542)
+.+.|+++.++++++..+|+|++++|+.++++.+.++.||++++++|+|+++.++++..+..- ......+++++..+.+
T Consensus 304 Aa~~g~dv~~lee~~~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~~~Ei~~~~l~~~~~v~~~~i~~~v~~~~~ 383 (488)
T 3ond_A 304 ATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQTDRWVF 383 (488)
T ss_dssp HHHTTCEECCGGGTTTTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSSTTTTBTHHHHHTSTTCEEEEEETTEEEEEC
T ss_pred HHHhCCccCCHHHHHHhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCCCcccchHHHHHhhhhheEEeeeeEEEEEe
Confidence 888999999999999999999999999999998899999999999999999889998877642 2245557777888888
Q ss_pred CC-CCEEEEecCCCcccccCC-CChhHHHhhHHHHHHHHHHHHhcCCC-CCCCCccccCChhhHHHHHHhcCCccccccc
Q psy4626 195 PD-GKRIVLLAEGRLVNLSCS-SLPSFVVSITACTQALALIELFNAPS-GRYKSDVYLLPKKMDEYVASLHLPTFDAHLT 271 (542)
Q Consensus 195 ~d-g~~I~LLa~GrLvnl~~~-thp~~vmd~sfa~q~la~~~L~~~~~-~~~~~gv~~lp~~~d~~VA~l~L~~lg~~i~ 271 (542)
++ ++.+.++++|+++|+++. +||+++|++||++|+|++++||+++. ++|+++||.||+++|++||++||++||++||
T Consensus 384 ~~fg~aI~lLaeGRIVNlsS~~G~p~~vm~~sfa~Q~la~~~l~~~~~~~~~~~gv~~lp~~ld~~vA~l~l~~~g~~l~ 463 (488)
T 3ond_A 384 PETNTGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLT 463 (488)
T ss_dssp TTTCCEEEEEGGGSCHHHHHSCCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSSEECCCHHHHHHHHHHHHGGGTCCCC
T ss_pred cchHHHHHHHcCCcEEEEecCcccCcccccccHHHHHHHHHHHHhCCCccccCCCceeCCHHHHHHHHHHhchhcCCchh
Confidence 88 999999999999999987 59999999999999999999999872 3899999999999999999999999999999
Q ss_pred cccHHHHhhcCCCCCCCCCCCcccc
Q psy4626 272 ELSDEQAKYMGLNKAGPFKPSYYSM 296 (542)
Q Consensus 272 ~lt~~~a~~lg~~e~~p~~a~ea~m 296 (542)
+||++|++|||+|+.+|||...+++
T Consensus 464 ~lt~~q~~y~~~~~~g~~k~~~~~y 488 (488)
T 3ond_A 464 KLSKDQADYISVPVEGPYKPFHYRY 488 (488)
T ss_dssp CCCHHHHHHTTCCTTSCCSCTTCCC
T ss_pred hcCHHHHHHcCCCCCCCCCccCCCC
Confidence 9999999999999999999987753
No 5
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=6.7e-43 Score=377.18 Aligned_cols=258 Identities=51% Similarity=0.911 Sum_probs=232.5
Q ss_pred ccceeecCchhhhHHHHhHHHHHHHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh
Q psy4626 38 TVPAMNVNDSVTKTKFDNLYMCRESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQAC 117 (542)
Q Consensus 38 ~~PV~~vn~s~~K~~fd~~~g~~~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~ 117 (542)
.+|+.++|+++.+.+|++.|++.+++++++.+.++..+.|++|+|+|+|.||+.+|++|+++|++|+++|+++.+..++.
T Consensus 218 v~p~~~vn~sVae~l~r~~~~~~~~l~~gw~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~ 297 (479)
T 1v8b_A 218 LFTAINVNDAVTKQKYDNVYGCRHSLPDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAV 297 (479)
T ss_dssp CSEEEECTTSHHHHTTHHHHHHHHHHHHHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH
T ss_pred EeccCCccHHHHHHHHhchHhHHHHHhhhhhhccccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH
Confidence 34555666666666678889999999988777777789999999999999999999999999999999999998876777
Q ss_pred cCCceeeCHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcC-CCcceeeeccceeeEecCC
Q psy4626 118 MDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRT-PDLTWEKVRSQVDHVIWPD 196 (542)
Q Consensus 118 ~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~-~~l~v~~~~~~v~~y~~~d 196 (542)
+.|+.+.+++++++.+|+||.+++++++|+.+.|+.||+|++++|+||++.++|..+|.+ ..+....+++.++.|.+|+
T Consensus 298 ~~g~~~~~l~ell~~aDiVi~~~~t~~lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~a~lDv~plp~ 377 (479)
T 1v8b_A 298 MEGFNVVTLDEIVDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVKPQVDRITLPN 377 (479)
T ss_dssp TTTCEECCHHHHTTTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEETTEEEEECTT
T ss_pred HcCCEecCHHHHHhcCCEEEECCChhhhcCHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEeeeEEEEECCC
Confidence 889998999999999999999999999999999999999999999999999999999975 4566666677889999999
Q ss_pred CCEEEEecCCCcccccCC-CChhHHHhhHHHHHHHHHHHHhcCCCC--CCCCccccCChhhHHHHHHhcCCccccccccc
Q psy4626 197 GKRIVLLAEGRLVNLSCS-SLPSFVVSITACTQALALIELFNAPSG--RYKSDVYLLPKKMDEYVASLHLPTFDAHLTEL 273 (542)
Q Consensus 197 g~~I~LLa~GrLvnl~~~-thp~~vmd~sfa~q~la~~~L~~~~~~--~~~~gv~~lp~~~d~~VA~l~L~~lg~~i~~l 273 (542)
++.+.++++++++++.++ +||.++|+.+|+.|+++++++|.++ + +++..|+.||+.+|++||.++|+++|..+++|
T Consensus 378 ~~~l~~l~~~nvv~tH~atghp~e~~~~s~a~~~~~ni~~~~~g-~~~~l~n~V~~lp~~~de~va~l~L~~lG~~l~~l 456 (479)
T 1v8b_A 378 GNKIIVLARGRLLNLGCATGHPAFVMSFSFCNQTFAQLDLWQNK-DTNKYENKVYLLPKHLDEKVALYHLKKLNASLTEL 456 (479)
T ss_dssp SCEEEEEGGGSBHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHTT-TSSSCCSSEECCCHHHHHHHHHHHHGGGTCCCCCC
T ss_pred CCeeeEecCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHcC-CCCcCCcceEeCChhhHHHHHHHHHHHcCChHhhc
Confidence 999999999999999777 4999999999999999999999987 6 78889999999999999999999999999999
Q ss_pred cHHHHhhcCCCCCCCCCCCcccc
Q psy4626 274 SDEQAKYMGLNKAGPFKPSYYSM 296 (542)
Q Consensus 274 t~~~a~~lg~~e~~p~~a~ea~m 296 (542)
|++|++|+++...+|+|...++|
T Consensus 457 t~~q~~yi~v~~~g~~~~~~~~~ 479 (479)
T 1v8b_A 457 DDNQCQFLGVNKSGPFKSNEYRY 479 (479)
T ss_dssp CHHHHHHHTCCTTSCCSCTTCCC
T ss_pred ChhhhhhEeeeeCCCCCcccCCC
Confidence 99999999999999999877653
No 6
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=3.2e-42 Score=373.12 Aligned_cols=256 Identities=58% Similarity=1.011 Sum_probs=230.8
Q ss_pred ccceeecCchhhhHHHHhHHHHHHHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh
Q psy4626 38 TVPAMNVNDSVTKTKFDNLYMCRESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQAC 117 (542)
Q Consensus 38 ~~PV~~vn~s~~K~~fd~~~g~~~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~ 117 (542)
.+|+.++|+++.+++|++.|++.+++++++.+.++..+.|++|+|+|+|.||+.+|++|+++|++|+++|+++.+..++.
T Consensus 238 v~n~~~vn~sVae~l~r~~~~~~~~l~~gw~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~ 317 (494)
T 3d64_A 238 PFPAFNVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAA 317 (494)
T ss_dssp CSCEEECTTSHHHHHHHHHHHHHTTHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH
T ss_pred EEECCCccHHHHHHHHhhhHhhhhhhhhhhhhccccccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH
Confidence 34566666666777788888999999988777777889999999999999999999999999999999999998876777
Q ss_pred cCCceeeCHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCC
Q psy4626 118 MDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDG 197 (542)
Q Consensus 118 ~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg 197 (542)
+.|+.+.+++++++.+|+||.+++++++|+++.|+.||+|++++|+||++.+||..+| . .+....+.+..+.|.+|++
T Consensus 318 ~~G~~~~~l~ell~~aDiVi~~~~t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL-~-AL~~g~I~~~~Dv~plp~~ 395 (494)
T 3d64_A 318 MEGYRVVTMEYAADKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVAST-R-QYQWENIKPQVDHIIFPDG 395 (494)
T ss_dssp TTTCEECCHHHHTTTCSEEEECSSSSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGG-T-TSEEEEEETTEEEEECTTS
T ss_pred HcCCEeCCHHHHHhcCCEEEECCCcccccCHHHHhhCCCCcEEEEcCCCcchhchHHH-H-hhhcCccceeEEEEECCCC
Confidence 8899989999999999999999999999999999999999999999999988888888 3 6666666678899999999
Q ss_pred CEEEEecCCCcccccCC-CChhHHHhhHHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCccccccccccHH
Q psy4626 198 KRIVLLAEGRLVNLSCS-SLPSFVVSITACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDAHLTELSDE 276 (542)
Q Consensus 198 ~~I~LLa~GrLvnl~~~-thp~~vmd~sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~~i~~lt~~ 276 (542)
+.+.++++++++++.++ +||+++|+.+|+.|+++++++|.++ ++++..|+.+|+++|++||.++|+++|+.|++||++
T Consensus 396 ~pL~~l~~~nvv~tH~atg~~~~~~~~~~a~~~~~ni~~~~~g-~~~~n~V~~lp~~~d~~va~l~L~~~g~~~~~l~~~ 474 (494)
T 3d64_A 396 KRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTRG-GEYANKVYVLPKHLDEKVARLHLARIGAQLSELSDD 474 (494)
T ss_dssp CEEEEEGGGSBHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHG-GGSCSSEEECCHHHHHHHHHHHHTTTTCCCCCCCHH
T ss_pred CchhhcCCCCEEEEeCcCCCCHHHHHHHHHHHHHHHHHHHHcC-CCCCCceeeCChhHHHHHHHHHHHHcCChHHhhChh
Confidence 99999999999999666 4999999999999999999999987 688899999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCCCCcccc
Q psy4626 277 QAKYMGLNKAGPFKPSYYSM 296 (542)
Q Consensus 277 ~a~~lg~~e~~p~~a~ea~m 296 (542)
|++|+++...+|+|...++|
T Consensus 475 q~~y~~v~~~g~~~~~~~~~ 494 (494)
T 3d64_A 475 QAAYIGVSKAGPFKPDHYRY 494 (494)
T ss_dssp HHHHHTCCTTSCCSCTTCCC
T ss_pred hHHhEeeccCCCCCcccCCC
Confidence 99999999999999876653
No 7
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=100.00 E-value=9.9e-42 Score=370.02 Aligned_cols=256 Identities=49% Similarity=0.850 Sum_probs=228.6
Q ss_pred ceeecCchhhhHHHHhHHHHHHHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcC
Q psy4626 40 PAMNVNDSVTKTKFDNLYMCRESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMD 119 (542)
Q Consensus 40 PV~~vn~s~~K~~fd~~~g~~~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~ 119 (542)
|+.++|+++++..|++.|+++++.|+++.+.++..+.|++|+|+|+|+||+.+|+.|+++|++|+++|++|.++.+|.+.
T Consensus 237 ~~~~vn~sVae~~~r~l~~~~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~ 316 (494)
T 3ce6_A 237 PAINVNDSVTKSKFDNKYGTRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMME 316 (494)
T ss_dssp CEEECTTSHHHHTTHHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT
T ss_pred ecCCccHHHHHHHHhhhhhhhhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc
Confidence 45555666666677899999999999998887667899999999999999999999999999999999999998888889
Q ss_pred CceeeCHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCC-CC
Q psy4626 120 GFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPD-GK 198 (542)
Q Consensus 120 G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~d-g~ 198 (542)
|+++.+++++++++|+||+|+|++++++.+.++.||+|++++|+|+++.++|..+|..+++....+.+..+.|.+++ ++
T Consensus 317 Ga~~~~l~e~l~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~~~ldv~~~~~~~~ 396 (494)
T 3ce6_A 317 GFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVKPQVDLWTFGDTGR 396 (494)
T ss_dssp TCEECCHHHHGGGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEETTEEEEECTTTCC
T ss_pred CCEEecHHHHHhCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEEEEEEEeecCCcch
Confidence 99888999999999999999999999988899999999999999999888998888765564445555667777777 89
Q ss_pred EEEEecCCCcccccCCC-ChhHHHhhHHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCccccccccccHHH
Q psy4626 199 RIVLLAEGRLVNLSCSS-LPSFVVSITACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDAHLTELSDEQ 277 (542)
Q Consensus 199 ~I~LLa~GrLvnl~~~t-hp~~vmd~sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~~i~~lt~~~ 277 (542)
.+.++++|+++|+.+.+ ||..+|+.+|+.|+++++++|.++ +.+...|+.+|+++|+.||.+||.+||..|++||++|
T Consensus 397 ~l~LL~~grlvnL~~~TPH~a~~~~~s~~~qa~~ai~~~~~g-~~~~~~V~~~P~~~De~vA~lhL~~lg~~l~~lt~~q 475 (494)
T 3ce6_A 397 SIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKN-DEYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQ 475 (494)
T ss_dssp EEEEEGGGSCHHHHHSCCSCHHHHHHHHHHHHHHHHHHHHTG-GGCCSSEECCCHHHHHHHHHHHHHHHTCCCCCCCHHH
T ss_pred HHHHHhCCCEEeccCCCCCccccchHHHHHHHHHHHHHHHcC-CCCCCEEEECHHHHHHHHHHhhHHHHHHHHHHhChhH
Confidence 99999999999999775 999999999999999999999876 5788889999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCCCcccc
Q psy4626 278 AKYMGLNKAGPFKPSYYSM 296 (542)
Q Consensus 278 a~~lg~~e~~p~~a~ea~m 296 (542)
++|+++...+|+|...++|
T Consensus 476 ~~y~~v~~~G~~k~~~~~~ 494 (494)
T 3ce6_A 476 AEYLGVDVEGPYKPDHYRY 494 (494)
T ss_dssp HHHHTCCTTSCCSCTTCCC
T ss_pred HHHcccccCCCCCcccCCC
Confidence 9999999999999877653
No 8
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=6.5e-41 Score=356.14 Aligned_cols=365 Identities=27% Similarity=0.392 Sum_probs=259.6
Q ss_pred CccHHHHHHHhCCCCCCCCceeeceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHHHHHHhhcCccccCcEE
Q psy4626 1 MPGIMALRKRAGDDKPLKNARIVGCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESIIDSLKRSTDVMFGGKQV 80 (542)
Q Consensus 1 MP~l~~l~~~~~~~~pl~G~~i~~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~~ai~r~~~~~l~GktV 80 (542)
||+|+++|++|+.+|||+|.||++|+|+|+|||. .-+ .+ .-.|..|
T Consensus 27 MP~L~~~r~~~~~~kPl~G~rI~~~lH~t~~Tav------------------------lie----tL------~a~GAev 72 (464)
T 3n58_A 27 MPGLMAAREEFGKSQPLKGARISGSLHMTIQTAV------------------------LIE----TL------KVLGAEV 72 (464)
T ss_dssp CHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHH------------------------HHH----HH------HHTTCEE
T ss_pred CHHHHHHHHHHhccCCCCCCEEEEEEecHHHHHH------------------------HHH----HH------HHcCCeE
Confidence 9999999999999999999999999999999997 111 21 2248999
Q ss_pred EEEcCChhH--HHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHh-----cCCcEEEEcCCCc-ccCCHHHHh
Q psy4626 81 VLCGYGEVG--KGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVI-----RTVDIVVTATGNK-NVVTREHMD 152 (542)
Q Consensus 81 vViG~G~IG--~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l-----~~aDvVi~atG~~-~lI~~e~l~ 152 (542)
.+.++++.. ..+|.++...|..|++|.-.. ..+ +.-.++.++ ..+|+|++..|.- .++. .-..
T Consensus 73 ~~~~cN~~STqd~~aaal~~~gi~v~A~kget--~ee------y~~~~~~~l~~~~~~~p~~ilDDGgDl~~~~h-~~~~ 143 (464)
T 3n58_A 73 RWASCNIFSTQDHAAAAIAATGTPVFAVKGET--LEE------YWTYTDQIFQWPDGEPSNMILDDGGDATMYIL-IGAR 143 (464)
T ss_dssp EEECSSTTCCCHHHHHHHHHTTCCEEECTTCC--HHH------HHHHHHHTTCCTTSCCCSEEEESSSHHHHHHH-HHHH
T ss_pred EEecCCCCCCcHHHHHHHHhcCCeEEEeCCCC--HHH------HHHHHHHHHcccCCCCCCEEEECchHHHHHHH-hhhh
Confidence 999999987 788888888999999984111 000 111123333 2489999987742 1121 0001
Q ss_pred ccCCCeEEEeccCCCcccChHhhcC----CCc-------ceeee----ccceeeEecCCCCEEEEecCCCcccccCCCCh
Q psy4626 153 KMKNGCVVCNMGHSNTEIDVNSLRT----PDL-------TWEKV----RSQVDHVIWPDGKRIVLLAEGRLVNLSCSSLP 217 (542)
Q Consensus 153 ~mk~GailvnvG~g~~eid~~aL~~----~~l-------~v~~~----~~~v~~y~~~dg~~I~LLa~GrLvnl~~~thp 217 (542)
.=+.+.++-+.+..+..+-+..++. ..- .+.++ ..++.++. .+.++|.|.. |
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~EeTtTGv~rL~-------~m~~~g~L~~------P 210 (464)
T 3n58_A 144 AEAGEDVLSNPQSEEEEVLFAQIKKRMAATPGFFTKQRAAIKGVTEETTTGVNRLY-------QLQKKGLLPF------P 210 (464)
T ss_dssp HHTTCCCSSSCCSHHHHHHHHHHHHHHHHSTTHHHHHHHHCCEEEECSHHHHHHHH-------HHHHHTCCCS------C
T ss_pred hhcccccCCCCCcHHHHHHHHHHHHHhhcCcchhHHHHhhccceeeccccchHHHH-------HHHHcCCCCC------C
Confidence 1122222211111000011111110 000 01111 11112111 2345566654 6
Q ss_pred hHHHhhHHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHH-HhcCCcccc----ccccccHHHHhhcCC----CCCCC
Q psy4626 218 SFVVSITACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVA-SLHLPTFDA----HLTELSDEQAKYMGL----NKAGP 288 (542)
Q Consensus 218 ~~vmd~sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA-~l~L~~lg~----~i~~lt~~~a~~lg~----~e~~p 288 (542)
...++.|.+++.....|=..+ . +...+.+.-- .+..+++++ .|++..+++++++|+ ++.||
T Consensus 211 vinVnds~tK~~fDn~yG~~e---------s-lvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 211 AINVNDSVTKSKFDNKYGCKE---------S-LVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp EEECTTSHHHHTTHHHHHHHH---------H-HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEeeccHhhhhhhhhhhcchH---------H-HHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 666677777754444431110 0 0011111000 234466666 899999999999999 47799
Q ss_pred CCCCccccCCeeeeehhhhcccCcEEEEccCCCCccCHhHHhcCCCCcEEEccCCCCcccccccccCCCcceecccCCee
Q psy4626 289 FKPSYYSMDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVD 368 (542)
Q Consensus 289 ~~a~ea~mdG~~v~~~~~a~~~~d~~~t~tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~~~l~~~~~~~~~~~~~v~ 368 (542)
.++++|.|+||++++++|+++.+|||+++||++++|+.++|++||+||||+|+|||++|||.++|.+ .++.++||||+
T Consensus 281 ~~a~~A~~~G~~vv~LeElL~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgdvEID~~aL~~--~~~~~ik~~v~ 358 (464)
T 3n58_A 281 ICALQAAMDGFEVVTLDDAASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN--LKWTNVKPQVD 358 (464)
T ss_dssp HHHHHHHHTTCEECCHHHHGGGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSSTTTBTCGGGTT--SEEEEEETTEE
T ss_pred chhhHHHhcCceeccHHHHHhhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCCcccCHHHHHh--CccccccCCee
Confidence 9999999999999999999999999999999999999999999999999999999999999999995 78899999999
Q ss_pred EEEcCCCCEEEEeecCceecccCCC-CChhhhhhhhhhh--------cccCCCcchhhHH---HHHHHHHHHhhccC
Q psy4626 369 HVIWPDGKRIVLLAEGRLVNLSCSS-LPSFVVSITACTQ--------RDKSSLIPCYHLR---FASNLAKYLLNSLT 433 (542)
Q Consensus 369 ~~~~~~g~~~~ll~~GrlvNl~~~~-~p~~~~~~~~~~~--------~~~~~l~~~~~~~---~~~~va~~~l~~~~ 433 (542)
+|++||||+||||+|||||||+||. ||+||||++|++| +++..++|+||.| +|++||+++|++|-
T Consensus 359 ~~~~~~g~~i~lLaeGrlvNL~~a~GhP~~vm~~sf~~Q~la~~~l~~~~~~~~~~v~~lP~~lDe~VA~l~L~~~g 435 (464)
T 3n58_A 359 LIEFPDGKRLILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTRTDAYKNEVYVLPKHLDEKVARLHLDKLG 435 (464)
T ss_dssp EEECTTSCEEEEEGGGSBHHHHHSCCSCHHHHHHHHHHHHHHHHHHHHSGGGCCSSEECCCHHHHHHHHHHHHGGGT
T ss_pred EEEeCCCCEEEEEeCCceecccCCCCChHHHHhHHHHHHHHHHHHHHhCccccCCCeeECCHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999997 9999999999994 4667899999999 99999999999984
No 9
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=100.00 E-value=3.7e-39 Score=347.52 Aligned_cols=104 Identities=51% Similarity=1.028 Sum_probs=101.1
Q ss_pred CCCcEEeecCCCHHHHHHHHHHHhhcC----CCceeecCCCchhhhhhh-------------------------------
Q psy4626 437 TGLPVFAWRGETEEDFWWCIDKCVNSW----QPNMILDDGGDATHWMLK------------------------------- 481 (542)
Q Consensus 437 ~g~~v~a~~g~~~~ey~~~~~~~~~~~----~p~~i~ddg~d~~~~~h~------------------------------- 481 (542)
+|||||||||||+|||||||+++| +| +||||||||||||+++|+
T Consensus 105 ~g~~v~a~~ge~~~ey~~~~~~~l-~~~~~~~p~~i~Ddggd~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (488)
T 3ond_A 105 DSAAVFAWKGETLQEYWWCTERAL-DWGPGGGPDLIVDDGGDTTLLIHEGVKAEEIYEKSGQFPDPDSTDNAEFKIVLSI 183 (488)
T ss_dssp HTCEEEECTTCCHHHHHHHHHHHH-CCCTTCCCSEEEESSSHHHHHHHHHHHHHHHHHHHCCCCCGGGCCCHHHHHHHHH
T ss_pred cCCeEEEeCCCCHHHHHHHHHHHH-hcccCCCCCEEEECchHHHHHHHcchhhhcchhhccccCCCCCCCchHHHHHHHH
Confidence 699999999999999999999999 46 599999999999999999
Q ss_pred ----------hccccccccceeccchhhHHHHHHHHHHcCCcccceeeeccccccccccccCCCCcccCC
Q psy4626 482 ----------KYPTMFKAIKGIVEESLTGVHRLYQLSKAGKLTVPAMNVNDSVTKTKFDNLYMCRESIID 541 (542)
Q Consensus 482 ----------~~~~~~~~~~g~~eetttgv~~l~~~~~~g~l~~p~i~vnd~~~k~~fdn~yg~~~s~~d 541 (542)
+||+++++|+|+||||||||+||++|.++|.|+||+||||||+||++|||+|||+||++|
T Consensus 184 ~~~~~~~~~~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yGt~~sl~d 253 (488)
T 3ond_A 184 IKEGLKTDPKRYHKMKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPD 253 (488)
T ss_dssp HHHHHTTCTTHHHHHHHHCCEEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHhhCcchhHHHHhhcceeEecccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhccccHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999876
No 10
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=100.00 E-value=6.5e-39 Score=340.40 Aligned_cols=315 Identities=39% Similarity=0.553 Sum_probs=227.6
Q ss_pred CccccCcEEEEEcCChhH-HHHHHHHHhCCCEEEEEeCCchh----hhhh-hcCCceee-----CHH-------HHh---
Q psy4626 72 DVMFGGKQVVLCGYGEVG-KGCCQSLKGLGCVIYITEIDPIC----ALQA-CMDGFSVV-----KLN-------EVI--- 130 (542)
Q Consensus 72 ~~~l~GktVvViG~G~IG-~~vA~~l~~~Ga~Viv~d~dp~r----~~~A-~~~G~~v~-----~l~-------e~l--- 130 (542)
...+.|.+++.+=-=.+= --++..|++.||+|.++--+|.- ...| ...|..+. +.+ .++
T Consensus 49 ~~pl~G~ri~~~lH~~~~Ta~l~~tL~~~GA~v~~~~~n~~stqd~~aaal~~~gi~v~a~~g~~~~ey~~~~~~~~~~~ 128 (435)
T 3gvp_A 49 EKPLAGAKIVGCTHITAQTAVLMETLGALGAQCRWAACNIYSTLNEVAAALAESGFPVFAWKGESEDDFWWCIDRCVNVE 128 (435)
T ss_dssp TCTTTTCEEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSCCCHHHHHHHHHHTCCEECCTTCCHHHHHHHHHHHHCBT
T ss_pred cCCCCCCEEEEEEccHHHHHHHHHHHHHCCCEEEEEecCCCcChHHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhcc
Confidence 356788887644322222 34467788999988887555531 1111 23466543 222 223
Q ss_pred -cCCcEEEEcCCCc-ccC---CHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecC
Q psy4626 131 -RTVDIVVTATGNK-NVV---TREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAE 205 (542)
Q Consensus 131 -~~aDvVi~atG~~-~lI---~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~ 205 (542)
..+|+|++..|.- .++ -.+.++.++.++....+| +.+|.+ +.++
T Consensus 129 ~~~p~~ilDdGgdl~~~~h~~~~~~~~~i~G~~EeTttG-------v~rl~~------------------------~~~~ 177 (435)
T 3gvp_A 129 GWQPNMILDDGGDLTHWIYKKYPNMFKKIKGIVEESVTG-------VHRLYQ------------------------LSKA 177 (435)
T ss_dssp TBCCSEEEESSSHHHHHHHHHCHHHHHTCCEEEECCHHH-------HHHHTC------------------------C--C
T ss_pred CCCCcEEEecchHHHHHHHHHhHHHHhhcceeEeccchh-------HHHHHH------------------------HHHc
Confidence 3689999988742 122 134566666666666666 455542 3344
Q ss_pred CCcccccCCCChhHHHhhHHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHH-HhcCCcccc----ccccccHHHHhh
Q psy4626 206 GRLVNLSCSSLPSFVVSITACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVA-SLHLPTFDA----HLTELSDEQAKY 280 (542)
Q Consensus 206 GrLvnl~~~thp~~vmd~sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA-~l~L~~lg~----~i~~lt~~~a~~ 280 (542)
|.|.. |.+.++.|.+++.....| ..+... -..+.+.-- .+..++.++ .|++..++++++
T Consensus 178 g~L~~------Pvi~vnds~tK~~fDn~y---------Gt~~s~-~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra 241 (435)
T 3gvp_A 178 GKLCV------PAMNVNDSVTKQKFDNLY---------CCRESI-LDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKA 241 (435)
T ss_dssp CCCCS------CEEECTTCHHHHHHHTHH---------HHHHHH-HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHH
T ss_pred CCCCC------CEEEecchhhhhhhhhhh---------hhHHHH-HHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHH
Confidence 44443 444445555553332221 111000 001111000 123345554 899999999999
Q ss_pred cCC----CCCCCCCCCccccCCeeeeehhhhcccCcEEEEccCCCCccCHhHHhcCCCCcEEEccCCCCcccccccccCC
Q psy4626 281 MGL----NKAGPFKPSYYSMDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTP 356 (542)
Q Consensus 281 lg~----~e~~p~~a~ea~mdG~~v~~~~~a~~~~d~~~t~tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~~~l~~~ 356 (542)
+|+ ++.+|.++++|.|+||++++++|+++.+||||++||++++|+.++|+.||+|++|+|+|||++|||+++|...
T Consensus 242 ~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~EId~~~L~~~ 321 (435)
T 3gvp_A 242 MGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLRTP 321 (435)
T ss_dssp TTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTTTBTGGGGCST
T ss_pred CCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCccCCHHHHHhh
Confidence 999 4778999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CcceecccCCeeEEEcCCCCEEEEeecCceecccCCCCChhhhhhhhhhh--------ccc-CCCcchhhHH---HHHHH
Q psy4626 357 DLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLSCSSLPSFVVSITACTQ--------RDK-SSLIPCYHLR---FASNL 424 (542)
Q Consensus 357 ~~~~~~~~~~v~~~~~~~g~~~~ll~~GrlvNl~~~~~p~~~~~~~~~~~--------~~~-~~l~~~~~~~---~~~~v 424 (542)
+.++.++||++++|.++|||+|+||++||||||+||.||+||||++|++| +++ +.++|+||.| +|++|
T Consensus 322 ~~~~~~ir~~v~~y~~~dg~~I~LLAeGrLvNl~~~~hp~~vm~~sf~~q~la~~~l~~~~~~~~~~~v~~lp~~~d~~v 401 (435)
T 3gvp_A 322 ELTWERVRSQVDHVIWPDGKRIVLLAEGRLLNLSCSTVPTFVLSITATTQALALIELYNAPEGRYKQDVYLLPKKMDEYV 401 (435)
T ss_dssp TCEEEEEETTEEEEECTTSCEEEEEGGGSBHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCTTTSCSSEEECCHHHHHHH
T ss_pred cceeEEEEcCeeeEEcCCCcEEEEecCCCEeeecCCCCcHHHHhHHHHHHHHHHHHHHhCcccccCCCeeeCCHHHHHHH
Confidence 88999999999999999999999999999999999999999999999994 353 5899999999 99999
Q ss_pred HHHHhhccC
Q psy4626 425 AKYLLNSLT 433 (542)
Q Consensus 425 a~~~l~~~~ 433 (542)
|+++|.+|-
T Consensus 402 A~~~l~~~g 410 (435)
T 3gvp_A 402 ASLHLPTFD 410 (435)
T ss_dssp HHHHGGGGT
T ss_pred HHHHHHhcC
Confidence 999999984
No 11
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=100.00 E-value=4.9e-38 Score=334.46 Aligned_cols=166 Identities=33% Similarity=0.568 Sum_probs=155.8
Q ss_pred ccccccHHHHhhcCC----CCCCCCCCCccccCCeeeeehhhhcccCcEEEEccCCCCccCHhHHhcCCCCcEEEccCCC
Q psy4626 269 HLTELSDEQAKYMGL----NKAGPFKPSYYSMDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHS 344 (542)
Q Consensus 269 ~i~~lt~~~a~~lg~----~e~~p~~a~ea~mdG~~v~~~~~a~~~~d~~~t~tg~~~vi~~~~~~~mk~gail~n~gh~ 344 (542)
.+++..+++++++|+ ++.+|.++.+|.++||++++++|+++.+|||++++|++++|+.++|+.||+|+||+|+|||
T Consensus 221 ~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgRg 300 (436)
T 3h9u_A 221 DVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHF 300 (436)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSSS
T ss_pred HHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCCC
Confidence 888889999999999 4778999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccccCCCcceecccCCeeEEEcCCCCEEEEeecCceecccCCC-CChhhhhhhhhhh--------cccC--CCc
Q psy4626 345 NTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLSCSS-LPSFVVSITACTQ--------RDKS--SLI 413 (542)
Q Consensus 345 ~~Ei~~~~l~~~~~~~~~~~~~v~~~~~~~g~~~~ll~~GrlvNl~~~~-~p~~~~~~~~~~~--------~~~~--~l~ 413 (542)
++|||+++|.+.+.++.++||+|+.|.++|||+|+||+|||||||+||. ||+||||++|++| +++. .++
T Consensus 301 ~vEID~~~L~~~~~~~~~ir~~vd~y~~~dg~~I~LLaeGrLvNl~~~~Ghp~~vm~~sf~~q~la~~~l~~~~~~~~~~ 380 (436)
T 3h9u_A 301 DTEIQVAWLKANAKERVEVKPQVDRYTMANGRHIILLAEGRLVNLGCASGHPSFVMSNSFCNQVLAQIELWTNRDTGKYP 380 (436)
T ss_dssp GGGBCHHHHHHHCSEEEEEETTEEEEECTTSCEEEEEGGGSCHHHHHSCCSCHHHHHHHHHHHHHHHHHHHHTTTTTSSC
T ss_pred CCccCHHHHHhhcCceEeecCCceEEEcCCCCEEEEecCCCeecccCCCCChHHHhhHHHHHHHHHHHHHHhCCCcccCC
Confidence 9999999999888889999999999999999999999999999999998 9999999999994 4554 899
Q ss_pred ch----hhHH---HHHHHHHHHhhccCC
Q psy4626 414 PC----YHLR---FASNLAKYLLNSLTS 434 (542)
Q Consensus 414 ~~----~~~~---~~~~va~~~l~~~~~ 434 (542)
|+ ||.| +|++||++||++|--
T Consensus 381 ~~~~~~v~~lp~~~d~~vA~~~l~~~g~ 408 (436)
T 3h9u_A 381 RGAKAQVYFLPKKLDEKVAALHLGKLGA 408 (436)
T ss_dssp C---CCEEECCHHHHHHHHHHHHHHHTC
T ss_pred CCCCceeeeCCHHHHHHHHHHHHHHcCC
Confidence 99 9999 999999999999843
No 12
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.95 E-value=8.5e-30 Score=276.52 Aligned_cols=110 Identities=54% Similarity=1.007 Sum_probs=104.3
Q ss_pred ccCCCCCCCcEEeecCCCHHHHHHHHHHHhhcC----CC-ceeecCCCchhhhhh-----------------h--h----
Q psy4626 431 SLTSSYTGLPVFAWRGETEEDFWWCIDKCVNSW----QP-NMILDDGGDATHWML-----------------K--K---- 482 (542)
Q Consensus 431 ~~~~~~~g~~v~a~~g~~~~ey~~~~~~~~~~~----~p-~~i~ddg~d~~~~~h-----------------~--~---- 482 (542)
..+.++.|||||||||||+|||||||+++| +| +| |||+|||||||+++| + +
T Consensus 111 ~~~~~~~g~~v~a~~g~~~~~y~~~~~~~~-~~~~~~~~~~~i~ddggd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (494)
T 3ce6_A 111 GTPDEPKGVPVFAWKGETLEEYWWAAEQML-TWPDPDKPANMILDDGGDATMLVLRGMQYEKAGVVPPAEEDDPAEWKVF 189 (494)
T ss_dssp CCSSSCCSCCEECCTTCCHHHHHHHHHHHH-CCSSTTSCCCEEEESSSHHHHHHHHHHHHHHHTSCCCCCTTSCHHHHHH
T ss_pred ccccCCCCeEEEEeCCCCHHHHHHHHHHHH-hccccCCCceEEeecchHHHHHHHcchhhhcccccCCcccCchHHHHHH
Confidence 467889999999999999999999999999 47 67 999999999999999 5 6
Q ss_pred --------------ccccccccceeccchhhHHHHHHHHHHcCCcccceeeeccccccccccccCCCCcccCC
Q psy4626 483 --------------YPTMFKAIKGIVEESLTGVHRLYQLSKAGKLTVPAMNVNDSVTKTKFDNLYMCRESIID 541 (542)
Q Consensus 483 --------------~~~~~~~~~g~~eetttgv~~l~~~~~~g~l~~p~i~vnd~~~k~~fdn~yg~~~s~~d 541 (542)
||++++++.|++|||++||+||++|.+.|++.+|++++|||++|++|||+|||++|+++
T Consensus 190 ~~~~~~~l~~~~~~~p~~~~~i~GvveetgtGVd~l~a~~~~Gilv~~~~~vn~sVae~~~r~l~~~~~s~~~ 262 (494)
T 3ce6_A 190 LNLLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFDNKYGTRHSLID 262 (494)
T ss_dssp HHHHHHHHHHCSSHHHHHHHHCCCEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCcccchhhhcCeEEEEEEeCCChhHHHHHHHcCCEEEecCCccHHHHHHHHhhhhhhhhhhhH
Confidence 99999999999999999999999999999999999999999999999999999998764
No 13
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=99.94 E-value=4.1e-28 Score=261.95 Aligned_cols=104 Identities=47% Similarity=0.940 Sum_probs=99.1
Q ss_pred CCCcEEeecCCCHHHHHHHHHHHhhcC------CCceeecCCCchhhhhh----------------------h--h----
Q psy4626 437 TGLPVFAWRGETEEDFWWCIDKCVNSW------QPNMILDDGGDATHWML----------------------K--K---- 482 (542)
Q Consensus 437 ~g~~v~a~~g~~~~ey~~~~~~~~~~~------~p~~i~ddg~d~~~~~h----------------------~--~---- 482 (542)
.|||||||||||+|||||||+++| +| +||||+|||||||+++| + +
T Consensus 95 ~gi~v~a~~g~~~~ey~~~~~~~l-~~~~~~~~~~~~i~ddggd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (479)
T 1v8b_A 95 ENVTVFAWKNETLEEYWWCVESAL-TWGDGDDNGPDMIVDDGGDATLLVHKGVEYEKLYEEKNILPDPEKAKNEEERCFL 173 (479)
T ss_dssp TTEEEECCTTCCHHHHHHHHHHHH-CCSSSSSCSCSEEEESSSHHHHHHHHHHHHHHHHHHHCCCCCGGGCSSHHHHHHH
T ss_pred CCceEEEeCCCCHHHHHHHHHHHh-cCcccccCCCCEEEeccchHHHHHHcchhhhhccccccccCCccccCchHHHHHH
Confidence 599999999999999999999999 46 89999999999999999 3 4
Q ss_pred -------------ccccccccceeccchhhHHHHHHHHHHcCCcccceeeeccccccccccccCCCCcccCC
Q psy4626 483 -------------YPTMFKAIKGIVEESLTGVHRLYQLSKAGKLTVPAMNVNDSVTKTKFDNLYMCRESIID 541 (542)
Q Consensus 483 -------------~~~~~~~~~g~~eetttgv~~l~~~~~~g~l~~p~i~vnd~~~k~~fdn~yg~~~s~~d 541 (542)
||+|+++++|++|||+|||+||.+|.+.|++.+|++++|+|+++++|+|+|||+||++|
T Consensus 174 ~~l~~~la~~~~~~~~l~~~l~gi~eet~~Gvd~l~a~~~~Gilv~p~~~vn~sVae~l~r~~~~~~~~l~~ 245 (479)
T 1v8b_A 174 TLLKNSILKNPKKWTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDNVYGCRHSLPD 245 (479)
T ss_dssp HHHHHHHTTCTTHHHHHHTTCCEEEECSHHHHHHHHHHHHTTCCCSEEEECTTSHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHhhhcChhhHHHHhcCeEEEEEeeCccHhHHHHHHHcCCEEeccCCccHHHHHHHHhchHhHHHHHhh
Confidence 89999999999999999999999999999999999999999999999999999998754
No 14
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=99.90 E-value=2.4e-25 Score=241.22 Aligned_cols=104 Identities=56% Similarity=1.010 Sum_probs=99.5
Q ss_pred CCCcEEeecCCCHHHHHHHHHHHhhcC----CCceeecCCCchhhhhh----------------h--h------------
Q psy4626 437 TGLPVFAWRGETEEDFWWCIDKCVNSW----QPNMILDDGGDATHWML----------------K--K------------ 482 (542)
Q Consensus 437 ~g~~v~a~~g~~~~ey~~~~~~~~~~~----~p~~i~ddg~d~~~~~h----------------~--~------------ 482 (542)
.|||||||||||.||||||++++| +| .||+|+|||||++.++| + +
T Consensus 123 ~gi~v~a~kget~~ey~~~~~~~l-~~~~~~~p~~i~Ddggd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~la 201 (494)
T 3d64_A 123 AGTPVFAFKGESLDEYWEFSHRIF-EWPNGEFANMILDDGGDATLLLILGSKAEKDRSVIARPTNEEEVALFKSIERHLE 201 (494)
T ss_dssp TTCCEECCTTCCHHHHHHHHHHTT-CCSTTCCCCEEEESSSHHHHHHHHHHHHHHCGGGGTCCCSHHHHHHHHHHHHHHT
T ss_pred CCceEEEecCCCHHHHHHHHHHHh-ccccCCCCceeecCCcceeehhhccchhhccccccCCccchhHHHHHHHHHHhhc
Confidence 599999999999999999999999 47 79999999999999999 5 5
Q ss_pred -----ccccccccceeccchhhHHHHHHHHHHcCCcccceeeeccccccccccccCCCCcccCC
Q psy4626 483 -----YPTMFKAIKGIVEESLTGVHRLYQLSKAGKLTVPAMNVNDSVTKTKFDNLYMCRESIID 541 (542)
Q Consensus 483 -----~~~~~~~~~g~~eetttgv~~l~~~~~~g~l~~p~i~vnd~~~k~~fdn~yg~~~s~~d 541 (542)
||+++++++|++|||++||+||.+|.+.|++.+|+++||+|++|++|+|+|||++|++|
T Consensus 202 ~~~~~~~~l~~~l~gi~eet~~Gvd~l~a~~~~Gilv~n~~~vn~sVae~l~r~~~~~~~~l~~ 265 (494)
T 3d64_A 202 IDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYGCRESLVD 265 (494)
T ss_dssp TCTTTTHHHHTTCCCEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHHHHHHHHHHTTHHH
T ss_pred cChHhHHHHhhCcEEEEEEcccCHhhHHHHHHCCCEEEECCCccHHHHHHHHhhhHhhhhhhhh
Confidence 89999999999999999999999999999999999999999999999999999999864
No 15
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.58 E-value=2.2e-14 Score=149.35 Aligned_cols=153 Identities=18% Similarity=0.320 Sum_probs=110.2
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHH------H-HHHh----------hcCccccCcEEEEEcCC
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESII------D-SLKR----------STDVMFGGKQVVLCGYG 86 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~------~-ai~r----------~~~~~l~GktVvViG~G 86 (542)
|..|++...+. ...++|+++.+.......+...+.--++. + .++. ..+..+.|++|+|+|+|
T Consensus 104 G~D~id~~~a~-~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG 182 (345)
T 4g2n_A 104 GYDHIDMAAAR-SLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMG 182 (345)
T ss_dssp CCTTBCHHHHH-HTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCS
T ss_pred cccccCHHHHH-hCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeC
Confidence 66788887664 45778888876544433333222211111 0 1110 11357899999999999
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee-CHHHHhcCCcEEEEcCC----CcccCCHHHHhccCCCeEEE
Q psy4626 87 EVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV-KLNEVIRTVDIVVTATG----NKNVVTREHMDKMKNGCVVC 161 (542)
Q Consensus 87 ~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~-~l~e~l~~aDvVi~atG----~~~lI~~e~l~~mk~Gailv 161 (542)
.||+.+|++|+++|++|+++|+++.....+. |+... +++++++++|+|+.+.. +.++++++.|+.||+|+++|
T Consensus 183 ~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailI 260 (345)
T 4g2n_A 183 RIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVI 260 (345)
T ss_dssp HHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEE
Confidence 9999999999999999999998775433232 66665 89999999999999753 67899999999999999999
Q ss_pred eccCCC---cccChHhhcCCC
Q psy4626 162 NMGHSN---TEIDVNSLRTPD 179 (542)
Q Consensus 162 nvG~g~---~eid~~aL~~~~ 179 (542)
|+|||. .+...++|..+.
T Consensus 261 N~aRG~~vde~aL~~aL~~g~ 281 (345)
T 4g2n_A 261 NISRGDLINDDALIEALRSKH 281 (345)
T ss_dssp ECSCGGGBCHHHHHHHHHHTS
T ss_pred ECCCCchhCHHHHHHHHHhCC
Confidence 999995 334455666553
No 16
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=99.58 E-value=6.8e-15 Score=152.65 Aligned_cols=153 Identities=13% Similarity=0.219 Sum_probs=111.9
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHH-------HHHHh--------hcCccccCcEEEEEcCChh
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESII-------DSLKR--------STDVMFGGKQVVLCGYGEV 88 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~-------~ai~r--------~~~~~l~GktVvViG~G~I 88 (542)
|..|++.+.+. ...++|+++.+.......+...+.-.++. +.+++ ..+..+.|++++|+|+|.|
T Consensus 74 G~d~id~~~~~-~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~I 152 (334)
T 3kb6_A 74 GFDHIDLDYCK-KKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRI 152 (334)
T ss_dssp CCTTBCHHHHH-HHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHH
T ss_pred ccchhcHHHHH-HCCCEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccccccceecCcEEEEECcchH
Confidence 56688877664 44678888876544443333222211111 11111 1235688999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcC----CCcccCCHHHHhccCCCeEEEecc
Q psy4626 89 GKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMG 164 (542)
Q Consensus 89 G~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~at----G~~~lI~~e~l~~mk~GailvnvG 164 (542)
|+.+|+++++||++|+++|+.+. ......++...+++++++.||+|+.+. .|+++|+++.|++||+|+++||+|
T Consensus 153 G~~va~~~~~fg~~v~~~d~~~~--~~~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~a 230 (334)
T 3kb6_A 153 GSRVAMYGLAFGMKVLCYDVVKR--EDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTA 230 (334)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCC--HHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred HHHHHHhhcccCceeeecCCccc--hhhhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecC
Confidence 99999999999999999986543 233456777889999999999999953 588999999999999999999999
Q ss_pred CCC---cccChHhhcCCC
Q psy4626 165 HSN---TEIDVNSLRTPD 179 (542)
Q Consensus 165 ~g~---~eid~~aL~~~~ 179 (542)
||. .+..+++|..+.
T Consensus 231 RG~iVde~aL~~aL~~g~ 248 (334)
T 3kb6_A 231 RGKVVDTDALYRAYQRGK 248 (334)
T ss_dssp CGGGBCHHHHHHHHHTTC
T ss_pred ccccccHHHHHHHHHhCC
Confidence 995 344466777664
No 17
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.57 E-value=1.7e-14 Score=149.38 Aligned_cols=155 Identities=15% Similarity=0.169 Sum_probs=112.7
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHHH-------HHHh---------hcCccccCcEEEEEcCCh
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESIID-------SLKR---------STDVMFGGKQVVLCGYGE 87 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~~-------ai~r---------~~~~~l~GktVvViG~G~ 87 (542)
|..|++...+. ...++|+++.+.......+...+.--++.. .+++ ..+..+.|++|+|+|+|.
T Consensus 77 G~d~id~~~~~-~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~ 155 (330)
T 4e5n_A 77 GFDNFDVDACT-ARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGA 155 (330)
T ss_dssp CCTTBCHHHHH-HTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSH
T ss_pred cccccCHHHHH-hcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCH
Confidence 55688776654 457788888775544443333322211110 1111 123468999999999999
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcC----CCcccCCHHHHhccCCCeEEEec
Q psy4626 88 VGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNM 163 (542)
Q Consensus 88 IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~at----G~~~lI~~e~l~~mk~Gailvnv 163 (542)
||+.+|+.|+++|++|+++|+++.....+...|+...+++++++.+|+|+.+. .+.++++.+.|+.||+|+++||+
T Consensus 156 IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~ 235 (330)
T 4e5n_A 156 IGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNP 235 (330)
T ss_dssp HHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEEC
Confidence 99999999999999999999887544445556777779999999999999964 47789999999999999999999
Q ss_pred cCCC---cccChHhhcCCC
Q psy4626 164 GHSN---TEIDVNSLRTPD 179 (542)
Q Consensus 164 G~g~---~eid~~aL~~~~ 179 (542)
|||. .+...++|..+.
T Consensus 236 arg~~vd~~aL~~aL~~g~ 254 (330)
T 4e5n_A 236 CRGSVVDEAAVLAALERGQ 254 (330)
T ss_dssp SCGGGBCHHHHHHHHHHTS
T ss_pred CCCchhCHHHHHHHHHhCC
Confidence 9995 233345666543
No 18
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.57 E-value=4.4e-14 Score=148.17 Aligned_cols=155 Identities=11% Similarity=0.197 Sum_probs=109.8
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHHH-------HHHh----------hcCccccCcEEEEEcCC
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESIID-------SLKR----------STDVMFGGKQVVLCGYG 86 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~~-------ai~r----------~~~~~l~GktVvViG~G 86 (542)
|..|++.+.+. ...++|+++.+.......+...+.--++.. .++. ..+..+.|++|+|+|+|
T Consensus 107 G~d~iD~~~a~-~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG 185 (365)
T 4hy3_A 107 LLNNMPYEVLF-QRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFG 185 (365)
T ss_dssp CCSCSCTTHHH-HSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCS
T ss_pred ccCcccHHHHh-cCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCC
Confidence 34577766553 456788888775544443333322211111 0110 12356889999999999
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcC----CCcccCCHHHHhccCCCeEEEe
Q psy4626 87 EVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCN 162 (542)
Q Consensus 87 ~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~at----G~~~lI~~e~l~~mk~Gailvn 162 (542)
.||+.+|+++++||++|+++|+++. ...+...|+...+++++++.+|+|+.+. .+.++++++.|+.||+|+++||
T Consensus 186 ~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN 264 (365)
T 4hy3_A 186 DLGKALRRVLSGFRARIRVFDPWLP-RSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFIL 264 (365)
T ss_dssp HHHHHHHHHHTTSCCEEEEECSSSC-HHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEE
T ss_pred cccHHHHHhhhhCCCEEEEECCCCC-HHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEE
Confidence 9999999999999999999998753 3345567888889999999999999964 4788999999999999999999
Q ss_pred ccCCC---cccChHhhcCCCc
Q psy4626 163 MGHSN---TEIDVNSLRTPDL 180 (542)
Q Consensus 163 vG~g~---~eid~~aL~~~~l 180 (542)
+|||+ .+...++|..+.+
T Consensus 265 ~aRG~~vde~aL~~aL~~g~i 285 (365)
T 4hy3_A 265 LSRADVVDFDALMAAVSSGHI 285 (365)
T ss_dssp CSCGGGSCHHHHHHHHHTTSS
T ss_pred CcCCchhCHHHHHHHHHcCCc
Confidence 99995 3344556766644
No 19
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.55 E-value=4.2e-14 Score=147.62 Aligned_cols=155 Identities=21% Similarity=0.324 Sum_probs=111.5
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHH-------HHHHh---------hcCccccCcEEEEEcCCh
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESII-------DSLKR---------STDVMFGGKQVVLCGYGE 87 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~-------~ai~r---------~~~~~l~GktVvViG~G~ 87 (542)
|..|++.+.+. ...++|+++.+.......+...+.--+.. +.+++ ..+..+.|++|+|+|+|.
T Consensus 96 G~d~id~~~a~-~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~ 174 (351)
T 3jtm_A 96 GSDHIDLQAAA-AAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGR 174 (351)
T ss_dssp CCTTBCHHHHH-HTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSH
T ss_pred eecccCHHHHH-hcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCH
Confidence 56688876654 45678888877543333222222211110 00110 123568999999999999
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee-CHHHHhcCCcEEEEcC----CCcccCCHHHHhccCCCeEEEe
Q psy4626 88 VGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV-KLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCN 162 (542)
Q Consensus 88 IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~-~l~e~l~~aDvVi~at----G~~~lI~~e~l~~mk~Gailvn 162 (542)
||+.+|++|+++|++|+++|+++.....+...|+... +++++++.+|+|+.+. .+.++++.+.|+.||+|+++||
T Consensus 175 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN 254 (351)
T 3jtm_A 175 IGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVN 254 (351)
T ss_dssp HHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEE
Confidence 9999999999999999999988755555555677655 8999999999999964 4778999999999999999999
Q ss_pred ccCCC---cccChHhhcCCC
Q psy4626 163 MGHSN---TEIDVNSLRTPD 179 (542)
Q Consensus 163 vG~g~---~eid~~aL~~~~ 179 (542)
+|||. .+....+|..+.
T Consensus 255 ~aRG~~vde~aL~~aL~~g~ 274 (351)
T 3jtm_A 255 NARGAIMERQAVVDAVESGH 274 (351)
T ss_dssp CSCGGGBCHHHHHHHHHHTS
T ss_pred CcCchhhCHHHHHHHHHhCC
Confidence 99995 333345666543
No 20
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.55 E-value=4.7e-14 Score=145.81 Aligned_cols=154 Identities=14% Similarity=0.205 Sum_probs=108.1
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHH-------HHHHhh-------cCccccCcEEEEEcCChhH
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESII-------DSLKRS-------TDVMFGGKQVVLCGYGEVG 89 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~-------~ai~r~-------~~~~l~GktVvViG~G~IG 89 (542)
|..|++...+. ...++|+++.+.......+...+.--+.. +...+. .+..+.|++|+|+|+|.||
T Consensus 71 G~d~id~~~~~-~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG 149 (324)
T 3evt_A 71 GVDYLPLKALQ-AAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIG 149 (324)
T ss_dssp CCTTSCHHHHH-HTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHH
T ss_pred cccccCHHHHH-HCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHH
Confidence 44577766553 45678888887554444333332221111 111111 2457899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcC----CCcccCCHHHHhccCCCeEEEeccC
Q psy4626 90 KGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 90 ~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~at----G~~~lI~~e~l~~mk~GailvnvG~ 165 (542)
+.+|++|+++|++|+++|+++...... ...+...+++++++++|+|+.+. .+.++++++.|+.||+|+++||+||
T Consensus 150 ~~vA~~l~~~G~~V~~~dr~~~~~~~~-~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 228 (324)
T 3evt_A 150 QSLAAKASALGMHVIGVNTTGHPADHF-HETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGR 228 (324)
T ss_dssp HHHHHHHHHTTCEEEEEESSCCCCTTC-SEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSC
T ss_pred HHHHHHHHhCCCEEEEECCCcchhHhH-hhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCC
Confidence 999999999999999999887543221 12233457889999999999964 3678999999999999999999999
Q ss_pred CC---cccChHhhcCCC
Q psy4626 166 SN---TEIDVNSLRTPD 179 (542)
Q Consensus 166 g~---~eid~~aL~~~~ 179 (542)
|. .+...++|..+.
T Consensus 229 G~~vd~~aL~~aL~~g~ 245 (324)
T 3evt_A 229 GPAVDTTALMTALDHHQ 245 (324)
T ss_dssp GGGBCHHHHHHHHHTTS
T ss_pred ChhhhHHHHHHHHHhCC
Confidence 95 333455676554
No 21
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.52 E-value=9.7e-14 Score=143.39 Aligned_cols=153 Identities=16% Similarity=0.223 Sum_probs=106.7
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHH------H-HHH-----hhcCccccCcEEEEEcCChhHHH
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESII------D-SLK-----RSTDVMFGGKQVVLCGYGEVGKG 91 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~------~-ai~-----r~~~~~l~GktVvViG~G~IG~~ 91 (542)
|..|++...+. . .++|+++.+.......+...+.--++. + .++ +.....+.|++++|+|+|.||+.
T Consensus 77 G~d~id~~~~~-~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~ 154 (324)
T 3hg7_A 77 GVDVLLDARCR-R-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQH 154 (324)
T ss_dssp CCGGGSCTTSC-C-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHH
T ss_pred CCCccChHHHh-C-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHH
Confidence 44577655443 2 688998887554444333332221111 0 111 11245789999999999999999
Q ss_pred HHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcC----CCcccCCHHHHhccCCCeEEEeccCCC
Q psy4626 92 CCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 92 vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~at----G~~~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
+|++|+++|++|+++|+++..... ...++...+++++++++|+|+.+. .+.++++.+.|+.||+|+++||+|||.
T Consensus 155 vA~~l~~~G~~V~~~dr~~~~~~~-~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~ 233 (324)
T 3hg7_A 155 IAHTGKHFGMKVLGVSRSGRERAG-FDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGN 233 (324)
T ss_dssp HHHHHHHTTCEEEEECSSCCCCTT-CSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGG
T ss_pred HHHHHHhCCCEEEEEcCChHHhhh-hhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCch
Confidence 999999999999999988743221 112233467899999999999964 467899988999999999999999995
Q ss_pred ---cccChHhhcCCC
Q psy4626 168 ---TEIDVNSLRTPD 179 (542)
Q Consensus 168 ---~eid~~aL~~~~ 179 (542)
.+....+|..+.
T Consensus 234 ~vde~aL~~aL~~g~ 248 (324)
T 3hg7_A 234 AINEGDLLTALRTGK 248 (324)
T ss_dssp GBCHHHHHHHHHTTS
T ss_pred hhCHHHHHHHHHcCC
Confidence 334456676654
No 22
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.50 E-value=1.9e-13 Score=142.77 Aligned_cols=108 Identities=17% Similarity=0.302 Sum_probs=90.0
Q ss_pred CccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee-CHHHHhcCCcEEEEcC----CCcccC
Q psy4626 72 DVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV-KLNEVIRTVDIVVTAT----GNKNVV 146 (542)
Q Consensus 72 ~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~-~l~e~l~~aDvVi~at----G~~~lI 146 (542)
+..+.|++|+|+|+|.||+.+|++|+++|++|+++|+++. ...+...|+... +++++++++|+|+.+. .+.+++
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li 233 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENS-KERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSII 233 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHH-HHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCC-HHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhh
Confidence 3568999999999999999999999999999999997753 334556788766 8999999999999964 367899
Q ss_pred CHHHHhccCCCeEEEeccCCC---cccChHhhcCCCc
Q psy4626 147 TREHMDKMKNGCVVCNMGHSN---TEIDVNSLRTPDL 180 (542)
Q Consensus 147 ~~e~l~~mk~GailvnvG~g~---~eid~~aL~~~~l 180 (542)
+.+.|+.||+|+++||+|||. .+...++|..+.+
T Consensus 234 ~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i 270 (352)
T 3gg9_A 234 TVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRP 270 (352)
T ss_dssp CHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSS
T ss_pred CHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCc
Confidence 999999999999999999995 3444566765543
No 23
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.50 E-value=3.9e-13 Score=142.77 Aligned_cols=151 Identities=19% Similarity=0.281 Sum_probs=105.2
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHH-----------HHHHHHH---hhcCccccCcEEEEEcCChhH
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRE-----------SIIDSLK---RSTDVMFGGKQVVLCGYGEVG 89 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~-----------s~~~ai~---r~~~~~l~GktVvViG~G~IG 89 (542)
|..|++.+.|. ...++|+++.++.+....+...+.-- .+-.+-+ ...+..+.|++++|+|+|.||
T Consensus 79 G~d~iD~~~a~-~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG 157 (404)
T 1sc6_A 79 GTNQVDLDAAA-KRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIG 157 (404)
T ss_dssp CCTTBCHHHHH-HTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHH
T ss_pred ccCccCHHHHH-hCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHH
Confidence 55577776554 56678888877544333222221111 1111111 012457899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcC----CCcccCCHHHHhccCCCeEEEecc
Q psy4626 90 KGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMG 164 (542)
Q Consensus 90 ~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~at----G~~~lI~~e~l~~mk~GailvnvG 164 (542)
+.+|++|+++|++|++||+++... ..++.. .+++++++.||+|+.+. .++++++++.|+.||+|++++|+|
T Consensus 158 ~~vA~~l~~~G~~V~~~d~~~~~~----~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~a 233 (404)
T 1sc6_A 158 TQLGILAESLGMYVYFYDIENKLP----LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINAS 233 (404)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCCC----CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred HHHHHHHHHCCCEEEEEcCCchhc----cCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECC
Confidence 999999999999999999766421 123443 48999999999999964 477899988999999999999999
Q ss_pred CCCc---ccChHhhcCCC
Q psy4626 165 HSNT---EIDVNSLRTPD 179 (542)
Q Consensus 165 ~g~~---eid~~aL~~~~ 179 (542)
|+.. +...++|..+.
T Consensus 234 Rg~~vd~~aL~~aL~~g~ 251 (404)
T 1sc6_A 234 RGTVVDIPALADALASKH 251 (404)
T ss_dssp CSSSBCHHHHHHHHHTTS
T ss_pred CChHHhHHHHHHHHHcCC
Confidence 9962 23345666553
No 24
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.49 E-value=2.7e-13 Score=140.76 Aligned_cols=153 Identities=14% Similarity=0.202 Sum_probs=109.1
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHH-------HHHHh-------hcCccccCcEEEEEcCChhH
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESII-------DSLKR-------STDVMFGGKQVVLCGYGEVG 89 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~-------~ai~r-------~~~~~l~GktVvViG~G~IG 89 (542)
|..|++.+.+. ...++|+++.+.......+...+.--++. ..+++ ..+..+.|++|+|+|+|.||
T Consensus 99 G~d~id~~~~~-~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG 177 (335)
T 2g76_A 99 GVDNVDLEAAT-RKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIG 177 (335)
T ss_dssp SCTTBCHHHHH-HHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHH
T ss_pred CcchhChHHHH-hCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHH
Confidence 55677766554 45678888776544433332222211110 01110 12356899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcC----CCcccCCHHHHhccCCCeEEEeccC
Q psy4626 90 KGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 90 ~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~at----G~~~lI~~e~l~~mk~GailvnvG~ 165 (542)
+.+|++|+++|++|+++|+++.+. .+...|+...+++++++++|+|+.+. .+.++++++.|+.||+|++++|+||
T Consensus 178 ~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~ar 256 (335)
T 2g76_A 178 REVATRMQSFGMKTIGYDPIISPE-VSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCAR 256 (335)
T ss_dssp HHHHHHHHTTTCEEEEECSSSCHH-HHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred HHHHHHHHHCCCEEEEECCCcchh-hhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence 999999999999999999877653 45567777778999999999999964 3678898889999999999999999
Q ss_pred CCc---ccChHhhcCC
Q psy4626 166 SNT---EIDVNSLRTP 178 (542)
Q Consensus 166 g~~---eid~~aL~~~ 178 (542)
+.. +....+|..+
T Consensus 257 g~vvd~~aL~~aL~~g 272 (335)
T 2g76_A 257 GGIVDEGALLRALQSG 272 (335)
T ss_dssp TTSBCHHHHHHHHHHT
T ss_pred ccccCHHHHHHHHHhC
Confidence 862 2224456544
No 25
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.49 E-value=4e-13 Score=142.88 Aligned_cols=152 Identities=20% Similarity=0.278 Sum_probs=106.1
Q ss_pred eceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHH-------HHHHh-------hcCccccCcEEEEEcCChh
Q psy4626 23 VGCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESII-------DSLKR-------STDVMFGGKQVVLCGYGEV 88 (542)
Q Consensus 23 ~~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~-------~ai~r-------~~~~~l~GktVvViG~G~I 88 (542)
+|..|++.+.+. ...++|+++..+......+...+.--+.. ..+++ ..+..+.|++++|+|+|.|
T Consensus 89 ~G~d~IDl~~a~-~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~I 167 (416)
T 3k5p_A 89 VGTNQVELKAAR-KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNI 167 (416)
T ss_dssp SCCTTBCHHHHH-HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHH
T ss_pred cccCccCHHHHH-hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHH
Confidence 356688776554 56788998887654443333222211110 01111 1135789999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCc-eeeCHHHHhcCCcEEEEcC----CCcccCCHHHHhccCCCeEEEec
Q psy4626 89 GKGCCQSLKGLGCVIYITEIDPICALQACMDGF-SVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNM 163 (542)
Q Consensus 89 G~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~-~v~~l~e~l~~aDvVi~at----G~~~lI~~e~l~~mk~Gailvnv 163 (542)
|+.+|+.++++|++|++||+++... ..+. .+.+++++++.||+|+.+. .++++++++.|+.||+|++++|+
T Consensus 168 G~~vA~~l~~~G~~V~~yd~~~~~~----~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~ 243 (416)
T 3k5p_A 168 GSQVGNLAESLGMTVRYYDTSDKLQ----YGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINN 243 (416)
T ss_dssp HHHHHHHHHHTTCEEEEECTTCCCC----BTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEECCcchhc----ccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEEC
Confidence 9999999999999999999775322 1222 3568999999999999965 36789999999999999999999
Q ss_pred cCCC---cccChHhhcCCC
Q psy4626 164 GHSN---TEIDVNSLRTPD 179 (542)
Q Consensus 164 G~g~---~eid~~aL~~~~ 179 (542)
|||. .+...++|..+.
T Consensus 244 aRG~vvd~~aL~~aL~~g~ 262 (416)
T 3k5p_A 244 ARGSDVDLEALAKVLQEGH 262 (416)
T ss_dssp SCTTSBCHHHHHHHHHTTS
T ss_pred CCChhhhHHHHHHHHHcCC
Confidence 9996 333455666654
No 26
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.48 E-value=3.7e-13 Score=138.01 Aligned_cols=153 Identities=16% Similarity=0.253 Sum_probs=109.1
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHH-------HHHH----h---hcCccccCcEEEEEcCChhH
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESII-------DSLK----R---STDVMFGGKQVVLCGYGEVG 89 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~-------~ai~----r---~~~~~l~GktVvViG~G~IG 89 (542)
|..|++.+.+. ...++|+++.+.......+...+.--+.. ..++ . ..+..+.|++|+|+|+|.||
T Consensus 76 G~d~id~~~~~-~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG 154 (307)
T 1wwk_A 76 GLDNIDVEAAK-EKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIG 154 (307)
T ss_dssp CCTTBCHHHHH-HHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHH
T ss_pred cccccCHHHHH-hCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHH
Confidence 45577765543 34578888777544443333322221111 0111 0 12346899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCC----CcccCCHHHHhccCCCeEEEeccC
Q psy4626 90 KGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATG----NKNVVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 90 ~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG----~~~lI~~e~l~~mk~GailvnvG~ 165 (542)
+.+|+.++++|++|+++|+++.+ ..+...|+...+++++++++|+|+.+.. +.++++.+.|+.||+|++++|+||
T Consensus 155 ~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~ar 233 (307)
T 1wwk_A 155 YQVAKIANALGMNILLYDPYPNE-ERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSR 233 (307)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred HHHHHHHHHCCCEEEEECCCCCh-hhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence 99999999999999999998866 3455678777789999999999999753 678898889999999999999999
Q ss_pred CCc---ccChHhhcCC
Q psy4626 166 SNT---EIDVNSLRTP 178 (542)
Q Consensus 166 g~~---eid~~aL~~~ 178 (542)
+.. +....+|..+
T Consensus 234 g~~vd~~aL~~aL~~g 249 (307)
T 1wwk_A 234 GPVVDTNALVKALKEG 249 (307)
T ss_dssp GGGBCHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHhC
Confidence 852 2224455544
No 27
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.47 E-value=2.4e-13 Score=141.07 Aligned_cols=153 Identities=14% Similarity=0.236 Sum_probs=110.1
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHH-------HHHHh--------hcCccccCcEEEEEcCChh
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESII-------DSLKR--------STDVMFGGKQVVLCGYGEV 88 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~-------~ai~r--------~~~~~l~GktVvViG~G~I 88 (542)
|..|++...+. ...++|+++.+.......+...+.--++. ..+++ ..+..+.|++|+|+|+|.|
T Consensus 74 G~d~id~~~~~-~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~I 152 (334)
T 2pi1_A 74 GFDHIDLDYCK-KKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRI 152 (334)
T ss_dssp CCTTBCHHHHH-HHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHH
T ss_pred cccccCHHHHH-HCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHH
Confidence 55688776653 45678888866433333222222211110 01110 1235689999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcC----CCcccCCHHHHhccCCCeEEEecc
Q psy4626 89 GKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMG 164 (542)
Q Consensus 89 G~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~at----G~~~lI~~e~l~~mk~GailvnvG 164 (542)
|+.+|++|+++|++|+++|+++..... ..|+...+++++++++|+|+.+. .+.++++++.|+.||+|+++||+|
T Consensus 153 G~~vA~~l~~~G~~V~~~d~~~~~~~~--~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 230 (334)
T 2pi1_A 153 GSRVAMYGLAFGMKVLCYDVVKREDLK--EKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTA 230 (334)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCHHHH--HTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred HHHHHHHHHHCcCEEEEECCCcchhhH--hcCceecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECC
Confidence 999999999999999999988765432 45777888999999999999964 478899999999999999999999
Q ss_pred CCC---cccChHhhcCCC
Q psy4626 165 HSN---TEIDVNSLRTPD 179 (542)
Q Consensus 165 ~g~---~eid~~aL~~~~ 179 (542)
|+. .+....+|..+.
T Consensus 231 Rg~~vd~~aL~~aL~~g~ 248 (334)
T 2pi1_A 231 RGKVVDTDALYRAYQRGK 248 (334)
T ss_dssp CGGGBCHHHHHHHHHTTC
T ss_pred CCcccCHHHHHHHHHhCC
Confidence 995 333455666554
No 28
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.47 E-value=7.5e-13 Score=140.06 Aligned_cols=155 Identities=13% Similarity=0.141 Sum_probs=109.7
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHH---------------HHHHHHH-hhcCccccCcEEEEEcCCh
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRE---------------SIIDSLK-RSTDVMFGGKQVVLCGYGE 87 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~---------------s~~~ai~-r~~~~~l~GktVvViG~G~ 87 (542)
|..|++.+.+. ...++|.++.+.......+...+.-- .-|+.-. ...+..+.|++++|+|+|.
T Consensus 123 G~d~iD~~aa~-~~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~ 201 (393)
T 2nac_A 123 GSDHVDLQSAI-DRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGR 201 (393)
T ss_dssp CCTTBCHHHHH-HTTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSH
T ss_pred cccccCHHHHh-cCCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECH
Confidence 56688876654 45678888776543332222221111 1121000 0113468999999999999
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcC----CCcccCCHHHHhccCCCeEEEe
Q psy4626 88 VGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCN 162 (542)
Q Consensus 88 IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~at----G~~~lI~~e~l~~mk~Gailvn 162 (542)
||+.+|+.|+++|++|+++|+++.....+...|+.. .+++++++.+|+|+.+. .+.++++++.|+.||+|+++||
T Consensus 202 IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN 281 (393)
T 2nac_A 202 IGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVN 281 (393)
T ss_dssp HHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEE
Confidence 999999999999999999998875544455567665 57899999999999964 4678999889999999999999
Q ss_pred ccCCCc---ccChHhhcCCC
Q psy4626 163 MGHSNT---EIDVNSLRTPD 179 (542)
Q Consensus 163 vG~g~~---eid~~aL~~~~ 179 (542)
+||+.. +...++|..+.
T Consensus 282 ~aRG~~vde~aL~~aL~~g~ 301 (393)
T 2nac_A 282 TARGKLCDRDAVARALESGR 301 (393)
T ss_dssp CSCGGGBCHHHHHHHHHTTS
T ss_pred CCCchHhhHHHHHHHHHcCC
Confidence 999952 23345666553
No 29
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=99.46 E-value=2.7e-13 Score=142.70 Aligned_cols=147 Identities=14% Similarity=0.194 Sum_probs=105.8
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEE
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVI 103 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~V 103 (542)
|..|++...+. ...++|+++.+.......+...+.-- ++.|..+..+.|++|+|+|+|.||+.+|++|+++|++|
T Consensus 71 G~D~iD~~~~~-~~gI~v~n~pg~~~~~VAE~~l~~lL----~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V 145 (381)
T 3oet_A 71 GTDHVDEAWLK-QAGIGFSAAPGCNAIAVVEYVFSALL----MLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEALGIRT 145 (381)
T ss_dssp CCTTBCHHHHH-HTTCEEECCTTTTHHHHHHHHHHHHH----HHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred cccccCHHHHH-hCCEEEEECCCcCcchhHHHHHHHHH----HHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHCCCEE
Confidence 44566655443 34566777666544444333322211 22233456899999999999999999999999999999
Q ss_pred EEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCC--------CcccCCHHHHhccCCCeEEEeccCCC---cccCh
Q psy4626 104 YITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATG--------NKNVVTREHMDKMKNGCVVCNMGHSN---TEIDV 172 (542)
Q Consensus 104 iv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG--------~~~lI~~e~l~~mk~GailvnvG~g~---~eid~ 172 (542)
+++|+.+ .. ...+....++++++++||+|+.++. +.++++.+.|+.||+|+++||+|||. .+...
T Consensus 146 ~~~d~~~--~~--~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~ 221 (381)
T 3oet_A 146 LLCDPPR--AA--RGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALL 221 (381)
T ss_dssp EEECHHH--HH--TTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHH
T ss_pred EEECCCh--HH--hccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHH
Confidence 9998532 21 1245567789999999999999752 78899999999999999999999996 33345
Q ss_pred HhhcCCC
Q psy4626 173 NSLRTPD 179 (542)
Q Consensus 173 ~aL~~~~ 179 (542)
.+|..+.
T Consensus 222 ~aL~~g~ 228 (381)
T 3oet_A 222 ARLNAGQ 228 (381)
T ss_dssp HHHHTTC
T ss_pred HHHHhCC
Confidence 5666553
No 30
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.46 E-value=9.6e-13 Score=136.81 Aligned_cols=149 Identities=11% Similarity=0.177 Sum_probs=95.8
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHH---------------HHHHH-HhhcCccccCcEEEEEcCCh
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRES---------------IIDSL-KRSTDVMFGGKQVVLCGYGE 87 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s---------------~~~ai-~r~~~~~l~GktVvViG~G~ 87 (542)
|..|++.+.+. ...++|+++.+.......+...+.--+ -|..- ....+..+.|++++|+|+|.
T Consensus 103 G~d~id~~~a~-~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~ 181 (340)
T 4dgs_A 103 GTDKVDLARAR-RRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQ 181 (340)
T ss_dssp CCTTBCHHHHH-HTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSH
T ss_pred CccccCHHHHH-hCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCH
Confidence 55677776554 456788888875544433332222111 12110 00113578999999999999
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCHHHHhcCCcEEEEcCC----CcccCCHHHHhccCCCeEEEe
Q psy4626 88 VGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKLNEVIRTVDIVVTATG----NKNVVTREHMDKMKNGCVVCN 162 (542)
Q Consensus 88 IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l~e~l~~aDvVi~atG----~~~lI~~e~l~~mk~Gailvn 162 (542)
||+.+|+.++++|++|+++|+++.+. .++. ..+++++++++|+|+.+.. +.++++++.|+.||+|++++|
T Consensus 182 IG~~vA~~l~~~G~~V~~~dr~~~~~-----~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN 256 (340)
T 4dgs_A 182 IGRALASRAEAFGMSVRYWNRSTLSG-----VDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVN 256 (340)
T ss_dssp HHHHHHHHHHTTTCEEEEECSSCCTT-----SCCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCcccc-----cCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEE
Confidence 99999999999999999999877542 2333 4588999999999999753 678999899999999999999
Q ss_pred ccCCC---cccChHhhcCC
Q psy4626 163 MGHSN---TEIDVNSLRTP 178 (542)
Q Consensus 163 vG~g~---~eid~~aL~~~ 178 (542)
+|||. .+...++|..+
T Consensus 257 ~aRG~vvde~aL~~aL~~g 275 (340)
T 4dgs_A 257 VARGNVVDEDALIEALKSG 275 (340)
T ss_dssp CSCC--------------C
T ss_pred CCCCcccCHHHHHHHHHcC
Confidence 99995 33334566554
No 31
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.46 E-value=4.1e-13 Score=140.78 Aligned_cols=156 Identities=17% Similarity=0.211 Sum_probs=109.5
Q ss_pred ceecccHHhhhcc-cccceeecCchhhhHHHHhHHHHHHH---------------HHHHH-HhhcCccccCcEEEEEcCC
Q psy4626 24 GCTHINAQTAAGK-LTVPAMNVNDSVTKTKFDNLYMCRES---------------IIDSL-KRSTDVMFGGKQVVLCGYG 86 (542)
Q Consensus 24 ~~lh~~~~tA~~~-L~~PV~~vn~s~~K~~fd~~~g~~~s---------------~~~ai-~r~~~~~l~GktVvViG~G 86 (542)
|..|++...+... -.++|+++.+.......+...+.--+ .|..- ....+..+.|++|+|+|+|
T Consensus 94 G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~G 173 (364)
T 2j6i_A 94 GSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAG 173 (364)
T ss_dssp CCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCS
T ss_pred ccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEEEEECcC
Confidence 5568887665422 16788888775433333222222111 12100 0012357899999999999
Q ss_pred hhHHHHHHHHHhCCCE-EEEEeCCchhhhhhhcCCceee-CHHHHhcCCcEEEEcCC----CcccCCHHHHhccCCCeEE
Q psy4626 87 EVGKGCCQSLKGLGCV-IYITEIDPICALQACMDGFSVV-KLNEVIRTVDIVVTATG----NKNVVTREHMDKMKNGCVV 160 (542)
Q Consensus 87 ~IG~~vA~~l~~~Ga~-Viv~d~dp~r~~~A~~~G~~v~-~l~e~l~~aDvVi~atG----~~~lI~~e~l~~mk~Gail 160 (542)
.||+.+|+.|+++|++ |+++|+++.....+...|+... +++++++.+|+|+.+.. +.++++.+.|+.||+|+++
T Consensus 174 ~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~l 253 (364)
T 2j6i_A 174 RIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWL 253 (364)
T ss_dssp HHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEE
T ss_pred HHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEE
Confidence 9999999999999996 9999988755554556677654 78999999999999753 5689998899999999999
Q ss_pred EeccCCC---cccChHhhcCCC
Q psy4626 161 CNMGHSN---TEIDVNSLRTPD 179 (542)
Q Consensus 161 vnvG~g~---~eid~~aL~~~~ 179 (542)
+|+||+. .+...++|..+.
T Consensus 254 In~arG~~vd~~aL~~aL~~g~ 275 (364)
T 2j6i_A 254 VNTARGAICVAEDVAAALESGQ 275 (364)
T ss_dssp EECSCGGGBCHHHHHHHHHHTS
T ss_pred EECCCCchhCHHHHHHHHHcCC
Confidence 9999995 233345665543
No 32
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.46 E-value=8.1e-13 Score=135.79 Aligned_cols=154 Identities=15% Similarity=0.240 Sum_probs=110.0
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHH------H-HHH-----hhcCccccCcEEEEEcCChhHHH
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESII------D-SLK-----RSTDVMFGGKQVVLCGYGEVGKG 91 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~------~-ai~-----r~~~~~l~GktVvViG~G~IG~~ 91 (542)
|..|++.+.+. ...++|+++.+.......+...+.--+.. + .++ ...+..+.|++|+|+|+|.||+.
T Consensus 78 G~d~id~~~~~-~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~ 156 (313)
T 2ekl_A 78 GLDNIDTEEAE-KRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTK 156 (313)
T ss_dssp CCTTBCHHHHH-HTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHH
T ss_pred CCCccCHHHHH-hCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHH
Confidence 55577765543 45678888877544433332222211111 0 111 11235789999999999999999
Q ss_pred HHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCC----CcccCCHHHHhccCCCeEEEeccCCC
Q psy4626 92 CCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATG----NKNVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 92 vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG----~~~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
+|+.++++|++|+++|+++.+. .+...|+...+++++++.+|+|+.+.. +.++++.+.++.||+|++++|+||++
T Consensus 157 ~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~ 235 (313)
T 2ekl_A 157 VGIIANAMGMKVLAYDILDIRE-KAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAV 235 (313)
T ss_dssp HHHHHHHTTCEEEEECSSCCHH-HHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGG
T ss_pred HHHHHHHCCCEEEEECCCcchh-HHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCc
Confidence 9999999999999999988664 355677777789999999999999753 67889888999999999999999985
Q ss_pred c---ccChHhhcCCC
Q psy4626 168 T---EIDVNSLRTPD 179 (542)
Q Consensus 168 ~---eid~~aL~~~~ 179 (542)
. +....+|..+.
T Consensus 236 ~vd~~aL~~aL~~g~ 250 (313)
T 2ekl_A 236 AVNGKALLDYIKKGK 250 (313)
T ss_dssp GBCHHHHHHHHHTTC
T ss_pred ccCHHHHHHHHHcCC
Confidence 2 22244565543
No 33
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.44 E-value=4.6e-13 Score=139.40 Aligned_cols=104 Identities=16% Similarity=0.259 Sum_probs=86.7
Q ss_pred CccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcC----CCcccCC
Q psy4626 72 DVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVT 147 (542)
Q Consensus 72 ~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~at----G~~~lI~ 147 (542)
+..+.|++|+|+|+|.||+.+|++|+++|++|+++|+++... ...+....+++++++++|+|+.+. .+.++++
T Consensus 143 ~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~ 219 (343)
T 2yq5_A 143 SNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE---FEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIG 219 (343)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG---GTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred ccccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh---hhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhh
Confidence 356889999999999999999999999999999999887542 233456679999999999999965 4788999
Q ss_pred HHHHhccCCCeEEEeccCCC---cccChHhhcCC
Q psy4626 148 REHMDKMKNGCVVCNMGHSN---TEIDVNSLRTP 178 (542)
Q Consensus 148 ~e~l~~mk~GailvnvG~g~---~eid~~aL~~~ 178 (542)
.+.|+.||+|+++||+|||. .+...++|..+
T Consensus 220 ~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g 253 (343)
T 2yq5_A 220 EKQLKEMKKSAYLINCARGELVDTGALIKALQDG 253 (343)
T ss_dssp HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcC
Confidence 99999999999999999995 33334566544
No 34
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=99.43 E-value=1.4e-12 Score=137.49 Aligned_cols=147 Identities=14% Similarity=0.223 Sum_probs=104.2
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEE
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVI 103 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~V 103 (542)
|..|++...+. ...++|+++.+.......+...+.-.+ +.|..+..+.|++|+|+|+|.||+.+|++|+++|++|
T Consensus 68 G~D~iD~~~~~-~~gI~v~n~pg~~~~~vAE~~l~~lL~----l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V 142 (380)
T 2o4c_A 68 GTDHLDLDYFA-EAGIAWSSAPGCNARGVVDYVLGCLLA----MAEVRGADLAERTYGVVGAGQVGGRLVEVLRGLGWKV 142 (380)
T ss_dssp CSTTBCHHHHH-HHTCEEECCTTTTHHHHHHHHHHHHHH----HHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred ccchhhHHHHH-hCCCEEEeCCCcChHHHHHHHHHHHHH----HHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHCCCEE
Confidence 34466655443 345677777665444443333222211 2222346789999999999999999999999999999
Q ss_pred EEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCC--------CcccCCHHHHhccCCCeEEEeccCCC---cccCh
Q psy4626 104 YITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATG--------NKNVVTREHMDKMKNGCVVCNMGHSN---TEIDV 172 (542)
Q Consensus 104 iv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG--------~~~lI~~e~l~~mk~GailvnvG~g~---~eid~ 172 (542)
+++|+++... ..|....+++++++++|+|+.++. +.++++++.|+.||+|++++|+||+. .+...
T Consensus 143 ~~~d~~~~~~----~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~ 218 (380)
T 2o4c_A 143 LVCDPPRQAR----EPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALR 218 (380)
T ss_dssp EEECHHHHHH----STTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHH
T ss_pred EEEcCChhhh----ccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHH
Confidence 9998544321 245556789999999999999752 77899988999999999999999995 23334
Q ss_pred HhhcCCC
Q psy4626 173 NSLRTPD 179 (542)
Q Consensus 173 ~aL~~~~ 179 (542)
.+|..+.
T Consensus 219 ~aL~~g~ 225 (380)
T 2o4c_A 219 RLLEGGA 225 (380)
T ss_dssp HHHHTTC
T ss_pred HHHHhCC
Confidence 5665543
No 35
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.41 E-value=3.2e-12 Score=129.68 Aligned_cols=149 Identities=17% Similarity=0.214 Sum_probs=106.4
Q ss_pred eceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCE
Q psy4626 23 VGCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCV 102 (542)
Q Consensus 23 ~~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~ 102 (542)
+|..|++...+.....++|++..+.. +..-.+.....+..+..+....+..+.|++|+|+|+|.||+.+|+.|+++|++
T Consensus 102 ~G~d~id~~~~~~~~gi~v~~~~~~~-~~~~~~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~ 180 (293)
T 3d4o_A 102 SGISNTYLNQCMKKTNRTLVKLMERD-DIAIYNSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGAK 180 (293)
T ss_dssp ESSCCHHHHHHHHHHTCEEEEGGGCH-HHHHHHHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred ecCCCHHHHHHHHHcCCeEEEecCCc-eeeeeccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCE
Confidence 56778876333335567888876411 00001111222333322222234578999999999999999999999999999
Q ss_pred EEEEeCCchhhhhhhcCCceee---CHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChH
Q psy4626 103 IYITEIDPICALQACMDGFSVV---KLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVN 173 (542)
Q Consensus 103 Viv~d~dp~r~~~A~~~G~~v~---~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~ 173 (542)
|+++|+++.+...+...|+... +++++++++|+|+.++.. ++++.+.++.||+|++++|+++++..+++.
T Consensus 181 V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-~~i~~~~l~~mk~~~~lin~ar~~~~~~~~ 253 (293)
T 3d4o_A 181 VKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPA-LVVTANVLAEMPSHTFVIDLASKPGGTDFR 253 (293)
T ss_dssp EEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS-CCBCHHHHHHSCTTCEEEECSSTTCSBCHH
T ss_pred EEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCCh-HHhCHHHHHhcCCCCEEEEecCCCCCCCHH
Confidence 9999998876555555676643 567788999999999854 788888999999999999999987656554
No 36
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=99.39 E-value=1.6e-12 Score=134.69 Aligned_cols=105 Identities=21% Similarity=0.397 Sum_probs=86.0
Q ss_pred CccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCC----CcccCC
Q psy4626 72 DVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATG----NKNVVT 147 (542)
Q Consensus 72 ~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG----~~~lI~ 147 (542)
+..+.|++|+|+|+|.||+.+|+.|+++|++|+++|+++... + ..++...+++++++.+|+|+.+.. +.++++
T Consensus 140 ~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~ 216 (333)
T 1dxy_A 140 GKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIIN 216 (333)
T ss_dssp CCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBC
T ss_pred ccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-HhccccCCHHHHHhcCCEEEEcCCCchhHHHHhC
Confidence 457899999999999999999999999999999999877543 1 223456688999999999999753 678899
Q ss_pred HHHHhccCCCeEEEeccCCC---cccChHhhcCCC
Q psy4626 148 REHMDKMKNGCVVCNMGHSN---TEIDVNSLRTPD 179 (542)
Q Consensus 148 ~e~l~~mk~GailvnvG~g~---~eid~~aL~~~~ 179 (542)
.+.|+.||+|++++|+||+. .+....+|..+.
T Consensus 217 ~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~ 251 (333)
T 1dxy_A 217 EAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGK 251 (333)
T ss_dssp HHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTS
T ss_pred HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCC
Confidence 88999999999999999995 233345666553
No 37
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.39 E-value=4.8e-12 Score=131.88 Aligned_cols=154 Identities=16% Similarity=0.247 Sum_probs=106.6
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHH------H-HHHhh--------------cCccccCcEEEE
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESII------D-SLKRS--------------TDVMFGGKQVVL 82 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~------~-ai~r~--------------~~~~l~GktVvV 82 (542)
|..|++.+.+. ...++|.++.+.......+...+.--++. + .+++. ....+.|++|+|
T Consensus 95 G~d~id~~~~~-~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGI 173 (347)
T 1mx3_A 95 GFDNIDIKSAG-DLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGI 173 (347)
T ss_dssp CCTTBCHHHHH-HTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEE
T ss_pred ccCcccHHHHH-hCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEE
Confidence 55688876554 45678888876543333222222111110 0 01000 013689999999
Q ss_pred EcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcC----CCcccCCHHHHhccCCC
Q psy4626 83 CGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNG 157 (542)
Q Consensus 83 iG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~at----G~~~lI~~e~l~~mk~G 157 (542)
+|+|.||+.+|+.|+++|++|+++|+++.+.. +...|+.. .+++++++.+|+|+.+. .+.++++++.|+.||+|
T Consensus 174 IG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~g 252 (347)
T 1mx3_A 174 IGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV-ERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQG 252 (347)
T ss_dssp ECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH-HHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTT
T ss_pred EeECHHHHHHHHHHHHCCCEEEEECCCcchhh-HhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCC
Confidence 99999999999999999999999998765432 33456654 47899999999999964 36789998899999999
Q ss_pred eEEEeccCCCc---ccChHhhcCCC
Q psy4626 158 CVVCNMGHSNT---EIDVNSLRTPD 179 (542)
Q Consensus 158 ailvnvG~g~~---eid~~aL~~~~ 179 (542)
++++|+||+.. +...++|..+.
T Consensus 253 ailIN~arg~~vd~~aL~~aL~~g~ 277 (347)
T 1mx3_A 253 AFLVNTARGGLVDEKALAQALKEGR 277 (347)
T ss_dssp EEEEECSCTTSBCHHHHHHHHHHTS
T ss_pred CEEEECCCChHHhHHHHHHHHHhCC
Confidence 99999999962 22344565543
No 38
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.38 E-value=3.4e-12 Score=131.52 Aligned_cols=142 Identities=11% Similarity=0.177 Sum_probs=103.1
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHH-----------HHHHHh------hcCccccCcEEEEEcCC
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESI-----------IDSLKR------STDVMFGGKQVVLCGYG 86 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~-----------~~ai~r------~~~~~l~GktVvViG~G 86 (542)
|..|++.+.+. ...++|.++.+.......+...+.--+. ..+.+. ..+..+.|++|+|+|+|
T Consensus 77 G~d~id~~~~~-~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G 155 (320)
T 1gdh_A 77 GFDHIDLDACK-ARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFG 155 (320)
T ss_dssp CCTTBCHHHHH-HTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCS
T ss_pred ccccccHHHHH-hCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcC
Confidence 45577776654 4567888887754433333222221111 111111 11246899999999999
Q ss_pred hhHHHHHHHHHhCCCEEEEEeC-CchhhhhhhcCCceee-CHHHHhcCCcEEEEcCC----CcccCCHHHHhccCCCeEE
Q psy4626 87 EVGKGCCQSLKGLGCVIYITEI-DPICALQACMDGFSVV-KLNEVIRTVDIVVTATG----NKNVVTREHMDKMKNGCVV 160 (542)
Q Consensus 87 ~IG~~vA~~l~~~Ga~Viv~d~-dp~r~~~A~~~G~~v~-~l~e~l~~aDvVi~atG----~~~lI~~e~l~~mk~Gail 160 (542)
.||+.+|+.++++|++|+++|+ ++.+. .+...|+... +++++++++|+|+.+.. +.++++++.++.||+|+++
T Consensus 156 ~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gail 234 (320)
T 1gdh_A 156 SIGQALAKRAQGFDMDIDYFDTHRASSS-DEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIV 234 (320)
T ss_dssp HHHHHHHHHHHTTTCEEEEECSSCCCHH-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCcChh-hhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEE
Confidence 9999999999999999999998 77653 3445677666 78899999999999753 6788988899999999999
Q ss_pred EeccCCC
Q psy4626 161 CNMGHSN 167 (542)
Q Consensus 161 vnvG~g~ 167 (542)
+|+|++.
T Consensus 235 In~arg~ 241 (320)
T 1gdh_A 235 VNTARGD 241 (320)
T ss_dssp EECSCGG
T ss_pred EECCCCc
Confidence 9999985
No 39
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.37 E-value=1.3e-12 Score=134.46 Aligned_cols=107 Identities=13% Similarity=0.145 Sum_probs=84.4
Q ss_pred CccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcC----CCcccCC
Q psy4626 72 DVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVT 147 (542)
Q Consensus 72 ~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~at----G~~~lI~ 147 (542)
...+.|++|+|+|+|.||+.+|++|+++|++|+++|+++......... ....+++++++++|+|+.+. .+.++++
T Consensus 134 ~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~-~~~~~l~ell~~aDiV~l~~Plt~~t~~li~ 212 (315)
T 3pp8_A 134 EYTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESY-VGREELRAFLNQTRVLINLLPNTAQTVGIIN 212 (315)
T ss_dssp CCCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEE-ESHHHHHHHHHTCSEEEECCCCCGGGTTCBS
T ss_pred CCCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhh-cccCCHHHHHhhCCEEEEecCCchhhhhhcc
Confidence 456889999999999999999999999999999999887532211100 01246888999999999964 3678999
Q ss_pred HHHHhccCCCeEEEeccCCC---cccChHhhcCCC
Q psy4626 148 REHMDKMKNGCVVCNMGHSN---TEIDVNSLRTPD 179 (542)
Q Consensus 148 ~e~l~~mk~GailvnvG~g~---~eid~~aL~~~~ 179 (542)
++.|+.||+|+++||+|||. .+...++|..+.
T Consensus 213 ~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~ 247 (315)
T 3pp8_A 213 SELLDQLPDGAYVLNLARGVHVQEADLLAALDSGK 247 (315)
T ss_dssp HHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTS
T ss_pred HHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCC
Confidence 99999999999999999995 334455666553
No 40
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.36 E-value=1.1e-11 Score=129.23 Aligned_cols=154 Identities=16% Similarity=0.179 Sum_probs=107.9
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHH---------------HHH---HH-HHH--hhcCccccCcEEEE
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCR---------------ESI---ID-SLK--RSTDVMFGGKQVVL 82 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~---------------~s~---~~-ai~--r~~~~~l~GktVvV 82 (542)
|..|++...+. ...++|.++.+.......+...+.- +.. |. ... ...+..+.|++|+|
T Consensus 90 G~d~id~~~~~-~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~l~g~~vgI 168 (348)
T 2w2k_A 90 GFDWLDLDALN-ERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIGKSAHNPRGHVLGA 168 (348)
T ss_dssp CCTTBCHHHHH-HTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTCCCSTTCEEEE
T ss_pred cccccCHHHHH-hCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccccccccccCcCCCCCEEEE
Confidence 55688876653 4567888877654333222221111 111 41 100 01245789999999
Q ss_pred EcCChhHHHHHHHHH-hCCCEEEEEeCCchhhhhhhcCCceee-CHHHHhcCCcEEEEcCC----CcccCCHHHHhccCC
Q psy4626 83 CGYGEVGKGCCQSLK-GLGCVIYITEIDPICALQACMDGFSVV-KLNEVIRTVDIVVTATG----NKNVVTREHMDKMKN 156 (542)
Q Consensus 83 iG~G~IG~~vA~~l~-~~Ga~Viv~d~dp~r~~~A~~~G~~v~-~l~e~l~~aDvVi~atG----~~~lI~~e~l~~mk~ 156 (542)
+|+|.||+.+|+.++ ++|++|+++|+++.+...+...|+... +++++++.+|+|+.++. +.++++++.++.||+
T Consensus 169 IG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~ 248 (348)
T 2w2k_A 169 VGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKP 248 (348)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCT
T ss_pred EEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCC
Confidence 999999999999999 999999999998765544444566655 78899999999999753 568898889999999
Q ss_pred CeEEEeccCCCc---ccChHhhcCC
Q psy4626 157 GCVVCNMGHSNT---EIDVNSLRTP 178 (542)
Q Consensus 157 GailvnvG~g~~---eid~~aL~~~ 178 (542)
|++++|++++.. +...++|..+
T Consensus 249 gailin~srg~~vd~~aL~~aL~~~ 273 (348)
T 2w2k_A 249 GSRIVNTARGPVISQDALIAALKSG 273 (348)
T ss_dssp TEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred CCEEEECCCCchhCHHHHHHHHHhC
Confidence 999999999952 2234455544
No 41
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.36 E-value=1.3e-11 Score=125.55 Aligned_cols=148 Identities=14% Similarity=0.224 Sum_probs=104.7
Q ss_pred eceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCE
Q psy4626 23 VGCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCV 102 (542)
Q Consensus 23 ~~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~ 102 (542)
++..|++...+.....++|+++.+...-....+. ...+..|....+..+..+.|++|+|+|+|.||+.+|+.|+++|++
T Consensus 104 ~g~~~~d~~~~~~~~gi~v~~~~~~~~v~~~r~~-~~~~g~~~~~~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~ 182 (300)
T 2rir_A 104 SGISNAYLENIAAQAKRKLVKLFERDDIAIYNSI-PTVEGTIMLAIQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGAN 182 (300)
T ss_dssp ESSCCHHHHHHHHHTTCCEEEGGGSHHHHHHHHH-HHHHHHHHHHHHTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred EecCCHHHHHHHHHCCCEEEeecCCCceEEEcCc-cHHHHHHHHHHHhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCE
Confidence 4567777333333556677777664211111111 112333432122234578999999999999999999999999999
Q ss_pred EEEEeCCchhhhhhhcCCcee---eCHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccCh
Q psy4626 103 IYITEIDPICALQACMDGFSV---VKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDV 172 (542)
Q Consensus 103 Viv~d~dp~r~~~A~~~G~~v---~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~ 172 (542)
|+++|+++.+...+...|+.+ .+++++++++|+||.++.. ++++.+.++.||+|++++|+++++...++
T Consensus 183 V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-~~i~~~~~~~mk~g~~lin~a~g~~~~~~ 254 (300)
T 2rir_A 183 VKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS-MILNQTVLSSMTPKTLILDLASRPGGTDF 254 (300)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-CCBCHHHHTTSCTTCEEEECSSTTCSBCH
T ss_pred EEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-hhhCHHHHHhCCCCCEEEEEeCCCCCcCH
Confidence 999999987655444456654 3577888999999999865 68888899999999999999998655544
No 42
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=99.35 E-value=3.8e-12 Score=131.75 Aligned_cols=103 Identities=26% Similarity=0.424 Sum_probs=84.6
Q ss_pred ccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcC----CCcccCCH
Q psy4626 73 VMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTR 148 (542)
Q Consensus 73 ~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~at----G~~~lI~~ 148 (542)
..+.|++|+|+|+|.||+.+|+.|+++|++|+++|+++.+.. ..++...+++++++.+|+|+.+. .+.+++++
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~ 218 (331)
T 1xdw_A 142 KEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKGI---EDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTR 218 (331)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSC---TTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCH
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHHH---HhccccCCHHHHHhhCCEEEEecCCchHHHHHhCH
Confidence 468999999999999999999999999999999998775431 12345568899999999999964 36789998
Q ss_pred HHHhccCCCeEEEeccCCC---cccChHhhcCC
Q psy4626 149 EHMDKMKNGCVVCNMGHSN---TEIDVNSLRTP 178 (542)
Q Consensus 149 e~l~~mk~GailvnvG~g~---~eid~~aL~~~ 178 (542)
+.|+.||+|++++|+||+. .+....+|..+
T Consensus 219 ~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g 251 (331)
T 1xdw_A 219 DFLKKMKDGAILVNCARGQLVDTEAVIEAVESG 251 (331)
T ss_dssp HHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHHhhCCCCcEEEECCCcccccHHHHHHHHHhC
Confidence 8999999999999999985 23334566554
No 43
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.33 E-value=1.3e-11 Score=125.69 Aligned_cols=102 Identities=15% Similarity=0.267 Sum_probs=83.6
Q ss_pred ccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcC----CCcccCC
Q psy4626 73 VMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTAT----GNKNVVT 147 (542)
Q Consensus 73 ~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~at----G~~~lI~ 147 (542)
..+.|++|+|+|+|.||+.+|+.|+++|++|+++|+++..... +.. .+++++++++|+|+.+. .+.++++
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~ 192 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----DVISESPADLFRQSDFVLIAIPLTDKTRGMVN 192 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----SEECSSHHHHHHHCSEEEECCCCCTTTTTCBS
T ss_pred eeeecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----ccccCChHHHhhccCeEEEEeeccccchhhhh
Confidence 3588999999999999999999999999999999987754321 333 48899999999999965 3678899
Q ss_pred HHHHhccCCCeEEEeccCCC---cccChHhhcCCC
Q psy4626 148 REHMDKMKNGCVVCNMGHSN---TEIDVNSLRTPD 179 (542)
Q Consensus 148 ~e~l~~mk~GailvnvG~g~---~eid~~aL~~~~ 179 (542)
.+.|+.||+|++++|+||+. .+...++|..+.
T Consensus 193 ~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~ 227 (290)
T 3gvx_A 193 SRLLANARKNLTIVNVARADVVSKPDMIGFLKERS 227 (290)
T ss_dssp HHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCT
T ss_pred HHHHhhhhcCceEEEeehhcccCCcchhhhhhhcc
Confidence 89999999999999999995 333345665543
No 44
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.32 E-value=8.1e-12 Score=129.39 Aligned_cols=103 Identities=20% Similarity=0.288 Sum_probs=84.1
Q ss_pred ccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee-CHHHHhcCCcEEEEcCC----CcccCC
Q psy4626 73 VMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV-KLNEVIRTVDIVVTATG----NKNVVT 147 (542)
Q Consensus 73 ~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~-~l~e~l~~aDvVi~atG----~~~lI~ 147 (542)
..+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.+.. .. ++... +++++++++|+|+.+.. ++++++
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~--~~-~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~ 218 (333)
T 1j4a_A 142 REVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPEL--EK-KGYYVDSLDDLYKQADVISLHVPDVPANVHMIN 218 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHH--HH-TTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBS
T ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchhH--Hh-hCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHh
Confidence 468999999999999999999999999999999998876542 12 24455 78899999999999754 668898
Q ss_pred HHHHhccCCCeEEEeccCCC---cccChHhhcCC
Q psy4626 148 REHMDKMKNGCVVCNMGHSN---TEIDVNSLRTP 178 (542)
Q Consensus 148 ~e~l~~mk~GailvnvG~g~---~eid~~aL~~~ 178 (542)
++.|+.||+|++++|+||+. .+....+|..+
T Consensus 219 ~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g 252 (333)
T 1j4a_A 219 DESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSG 252 (333)
T ss_dssp HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 88999999999999999985 23334455544
No 45
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.31 E-value=2.3e-11 Score=124.52 Aligned_cols=89 Identities=24% Similarity=0.357 Sum_probs=77.1
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcC----CCcccCCHH
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTRE 149 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~at----G~~~lI~~e 149 (542)
.+.|++++|+|+|.||+.+|+.|+++|++|+++|+++. . . ......+++++++.+|+|+.+. .+.++++++
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~-~--~--~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~ 195 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-E--G--PWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQ 195 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC-C--S--SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-c--c--CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHH
Confidence 68999999999999999999999999999999998775 1 1 1223457889999999999975 477899988
Q ss_pred HHhccCCCeEEEeccCCC
Q psy4626 150 HMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 150 ~l~~mk~GailvnvG~g~ 167 (542)
.|+.||+|++++|+||++
T Consensus 196 ~l~~mk~gailin~srg~ 213 (303)
T 1qp8_A 196 HLALMAEDAVFVNVGRAE 213 (303)
T ss_dssp HHTTSCTTCEEEECSCGG
T ss_pred HHhhCCCCCEEEECCCCc
Confidence 999999999999999985
No 46
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.31 E-value=2.1e-11 Score=133.65 Aligned_cols=142 Identities=16% Similarity=0.256 Sum_probs=103.4
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHH-----------HHHHHH-h--hcCccccCcEEEEEcCChhH
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRES-----------IIDSLK-R--STDVMFGGKQVVLCGYGEVG 89 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s-----------~~~ai~-r--~~~~~l~GktVvViG~G~IG 89 (542)
|..|++.+.+. ...++|+++.+..+....+...+.--+ +-.+-+ + ..+..+.|++++|+|+|.||
T Consensus 76 G~d~id~~~~~-~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG 154 (529)
T 1ygy_A 76 GLDNVDVDAAT-ARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIG 154 (529)
T ss_dssp CCTTBCHHHHH-HTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHH
T ss_pred CcCccCHhHHH-hCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHH
Confidence 44588876554 456788887765433332222222111 111111 1 12356899999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcC----CCcccCCHHHHhccCCCeEEEeccC
Q psy4626 90 KGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 90 ~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~at----G~~~lI~~e~l~~mk~GailvnvG~ 165 (542)
+.+|+.|+++|++|+++|+++.+ ..+...|+...+++++++.||+|+.|+ .+.++++.+.++.||+|++++|+|+
T Consensus 155 ~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~ar 233 (529)
T 1ygy_A 155 QLVAQRIAAFGAYVVAYDPYVSP-ARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAAR 233 (529)
T ss_dssp HHHHHHHHTTTCEEEEECTTSCH-HHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred HHHHHHHHhCCCEEEEECCCCCh-hHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCC
Confidence 99999999999999999987743 335566777778999999999999976 4678898778999999999999999
Q ss_pred CC
Q psy4626 166 SN 167 (542)
Q Consensus 166 g~ 167 (542)
+.
T Consensus 234 g~ 235 (529)
T 1ygy_A 234 GG 235 (529)
T ss_dssp TT
T ss_pred Cc
Confidence 86
No 47
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.31 E-value=5.4e-11 Score=122.10 Aligned_cols=137 Identities=18% Similarity=0.308 Sum_probs=99.6
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHH-----------HHHHHh------hcCccccCcEEEEEcCC
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESI-----------IDSLKR------STDVMFGGKQVVLCGYG 86 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~-----------~~ai~r------~~~~~l~GktVvViG~G 86 (542)
|..|++.+.+. ...++|+++.+.......+...+.--+. ..+-+. ..+..+.|++|+|+|+|
T Consensus 75 G~d~id~~~~~-~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G 153 (311)
T 2cuk_A 75 GVDHVDLEAAR-ERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMG 153 (311)
T ss_dssp CCTTBCHHHHH-TTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCS
T ss_pred CccccCHHHHH-hCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEEC
Confidence 55677776554 4567888887754443333222221111 011110 01246899999999999
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcC----CCcccCCHHHHhccCCCeEEEe
Q psy4626 87 EVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCN 162 (542)
Q Consensus 87 ~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~at----G~~~lI~~e~l~~mk~Gailvn 162 (542)
.||+.+|+.++++|++|+++|+++.+.. ....+++++++.+|+|+.+. .+.++++++.++.||+|++++|
T Consensus 154 ~IG~~~A~~l~~~G~~V~~~d~~~~~~~------~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin 227 (311)
T 2cuk_A 154 RIGQAVAKRALAFGMRVVYHARTPKPLP------YPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLN 227 (311)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCCSSS------SCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCcccc------cccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEE
Confidence 9999999999999999999998775432 23567889999999999974 3678898889999999999999
Q ss_pred ccCCC
Q psy4626 163 MGHSN 167 (542)
Q Consensus 163 vG~g~ 167 (542)
+||+.
T Consensus 228 ~srg~ 232 (311)
T 2cuk_A 228 TARGA 232 (311)
T ss_dssp CSCGG
T ss_pred CCCCC
Confidence 99985
No 48
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.26 E-value=3e-11 Score=125.22 Aligned_cols=149 Identities=19% Similarity=0.232 Sum_probs=103.3
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHH-----------HHHHHHhh----cCccccCcEEEEEcCChh
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRES-----------IIDSLKRS----TDVMFGGKQVVLCGYGEV 88 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s-----------~~~ai~r~----~~~~l~GktVvViG~G~I 88 (542)
|..|++.+.+. ...++|.++.+.......+...+.--+ +..+-+.. .+..+.|++++|+|+|.|
T Consensus 97 G~d~id~~~~~-~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~i 175 (333)
T 3ba1_A 97 GLDKVDLIKCE-EKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRI 175 (333)
T ss_dssp CCTTBCHHHHH-HHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHH
T ss_pred cccccCHHHHH-hCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHH
Confidence 44577665543 445788888775443333222222111 11111111 134689999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCHHHHhcCCcEEEEcCC----CcccCCHHHHhccCCCeEEEec
Q psy4626 89 GKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKLNEVIRTVDIVVTATG----NKNVVTREHMDKMKNGCVVCNM 163 (542)
Q Consensus 89 G~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l~e~l~~aDvVi~atG----~~~lI~~e~l~~mk~Gailvnv 163 (542)
|+.+|+.++++|++|+++|+++.+. .|+. ..+++++++++|+|+.++. ++++++++.++.||+|++++|+
T Consensus 176 G~~vA~~l~~~G~~V~~~dr~~~~~-----~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~ 250 (333)
T 3ba1_A 176 GLAVAERAEAFDCPISYFSRSKKPN-----TNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINI 250 (333)
T ss_dssp HHHHHHHHHTTTCCEEEECSSCCTT-----CCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEEC
T ss_pred HHHHHHHHHHCCCEEEEECCCchhc-----cCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEEC
Confidence 9999999999999999999887542 2444 4578899999999999753 5688988899999999999999
Q ss_pred cCCCc---ccChHhhcCC
Q psy4626 164 GHSNT---EIDVNSLRTP 178 (542)
Q Consensus 164 G~g~~---eid~~aL~~~ 178 (542)
+++.. +....+|..+
T Consensus 251 srG~~vd~~aL~~aL~~g 268 (333)
T 3ba1_A 251 GRGPHVDEPELVSALVEG 268 (333)
T ss_dssp SCGGGBCHHHHHHHHHHT
T ss_pred CCCchhCHHHHHHHHHcC
Confidence 99952 2334455544
No 49
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.26 E-value=9.7e-11 Score=121.00 Aligned_cols=143 Identities=17% Similarity=0.215 Sum_probs=103.1
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHHHH-------HHHHhh----------cCccccCcEEEEEcCC
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRESII-------DSLKRS----------TDVMFGGKQVVLCGYG 86 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s~~-------~ai~r~----------~~~~l~GktVvViG~G 86 (542)
|..|++...+. ...++|+++.+.......+...+.--+.. ..+++. .+..+.|++|+|+|+|
T Consensus 86 G~d~id~~~~~-~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G 164 (330)
T 2gcg_A 86 GIDHLALDEIK-KRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLG 164 (330)
T ss_dssp CCTTBCHHHHH-HTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCS
T ss_pred ccccccHHHHH-hCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcC
Confidence 45577776553 45678888877544433332222211111 011110 1246889999999999
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCC----CcccCCHHHHhccCCCeEEEe
Q psy4626 87 EVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATG----NKNVVTREHMDKMKNGCVVCN 162 (542)
Q Consensus 87 ~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG----~~~lI~~e~l~~mk~Gailvn 162 (542)
.||+.+|+.++++|++|+++|+++.+...+...|....+++++++++|+|+.+.. +.++++.+.++.||+|++++|
T Consensus 165 ~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn 244 (330)
T 2gcg_A 165 RIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFIN 244 (330)
T ss_dssp HHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEE
Confidence 9999999999999999999998876554445556666688899999999999763 567888788999999999999
Q ss_pred ccCCC
Q psy4626 163 MGHSN 167 (542)
Q Consensus 163 vG~g~ 167 (542)
++++.
T Consensus 245 ~srg~ 249 (330)
T 2gcg_A 245 ISRGD 249 (330)
T ss_dssp CSCGG
T ss_pred CCCCc
Confidence 99985
No 50
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.24 E-value=2e-10 Score=118.97 Aligned_cols=152 Identities=18% Similarity=0.208 Sum_probs=105.8
Q ss_pred ceecccHHhhhcccccceeecCchhhhHHHHhHHHHHHH---------------HHHHHH-hhcC----ccccCcEEEEE
Q psy4626 24 GCTHINAQTAAGKLTVPAMNVNDSVTKTKFDNLYMCRES---------------IIDSLK-RSTD----VMFGGKQVVLC 83 (542)
Q Consensus 24 ~~lh~~~~tA~~~L~~PV~~vn~s~~K~~fd~~~g~~~s---------------~~~ai~-r~~~----~~l~GktVvVi 83 (542)
|..|++...+. ...++|.++.+.......+...+.--+ .|.... ...+ ..+.|++|+|+
T Consensus 74 G~d~id~~~~~-~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~g~~vgII 152 (333)
T 2d0i_A 74 GYDNIDLEEAT-KRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGIL 152 (333)
T ss_dssp CCTTBCHHHHH-HTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEE
T ss_pred ccccccHHHHH-hCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCcccccCCcccCCCCcCEEEEE
Confidence 45577776554 456788888775443332222222111 121000 0123 46899999999
Q ss_pred cCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCC----CcccCCHHHHhccCCCeE
Q psy4626 84 GYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATG----NKNVVTREHMDKMKNGCV 159 (542)
Q Consensus 84 G~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG----~~~lI~~e~l~~mk~Gai 159 (542)
|+|.||+.+|+.++++|++|+++|+++.+ ..+...|+...+++++++++|+|+.++. +.++++++.++.||+| +
T Consensus 153 G~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-i 230 (333)
T 2d0i_A 153 GMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-Y 230 (333)
T ss_dssp CCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-E
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-E
Confidence 99999999999999999999999998875 3344456666688899999999999753 5678887789999999 9
Q ss_pred EEeccCCCc--cc-ChHhhcCC
Q psy4626 160 VCNMGHSNT--EI-DVNSLRTP 178 (542)
Q Consensus 160 lvnvG~g~~--ei-d~~aL~~~ 178 (542)
++|+|++.. +. ...+|..+
T Consensus 231 lin~srg~~vd~~aL~~aL~~~ 252 (333)
T 2d0i_A 231 LVNIGRGALVDEKAVTEAIKQG 252 (333)
T ss_dssp EEECSCGGGBCHHHHHHHHHTT
T ss_pred EEECCCCcccCHHHHHHHHHcC
Confidence 999999852 22 23456544
No 51
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.22 E-value=9.2e-11 Score=121.43 Aligned_cols=94 Identities=19% Similarity=0.260 Sum_probs=81.3
Q ss_pred ccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCC----CcccCCH
Q psy4626 73 VMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATG----NKNVVTR 148 (542)
Q Consensus 73 ~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG----~~~lI~~ 148 (542)
..+.|++|+|+|+|.||+.+|+.++++|++|+++|+++.+ ..+...|+...+++++++++|+|+.++. +++++++
T Consensus 146 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~ 224 (334)
T 2dbq_A 146 YDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINE 224 (334)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBCH
T ss_pred cCCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhCH
Confidence 4689999999999999999999999999999999998866 3344456666788899999999999763 4578887
Q ss_pred HHHhccCCCeEEEeccCCC
Q psy4626 149 EHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 149 e~l~~mk~GailvnvG~g~ 167 (542)
+.++.||+|++++|++++.
T Consensus 225 ~~~~~mk~~ailIn~srg~ 243 (334)
T 2dbq_A 225 ERLKLMKKTAILINIARGK 243 (334)
T ss_dssp HHHHHSCTTCEEEECSCGG
T ss_pred HHHhcCCCCcEEEECCCCc
Confidence 8899999999999999985
No 52
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=99.07 E-value=4e-10 Score=116.78 Aligned_cols=189 Identities=14% Similarity=0.213 Sum_probs=130.6
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.++++|+++....+ -++++.|+.+++-..+...|.|-+.+|++++.++++.+..+..
T Consensus 38 ~~l~~ad~i~v~~~~--~i~~~~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~-------------------- 95 (334)
T 3kb6_A 38 NELKKAELISVFVYD--KLTEELLSKMPRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPA-------------------- 95 (334)
T ss_dssp HHHHHCSEEEECTTS--CBCHHHHHTCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCTT--------------------
T ss_pred HHhcCCCEEEEeCCC--CCCHHHHhcCCCCcEEEECCcccchhcHHHHHHCCCEEEECCC--------------------
Confidence 456889998775433 3778999999998899999999888999988765544432210
Q ss_pred cccccCCCChhHHHhhHHHH------HHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHH
Q psy4626 208 LVNLSCSSLPSFVVSITACT------QALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQ 277 (542)
Q Consensus 208 Lvnl~~~thp~~vmd~sfa~------q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~ 277 (542)
.++..+-+..++. ++-........ ++|...-..... ++..+++|+ +|++..+++
T Consensus 96 -------~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~--~~~~~~~~~~~~-------~l~g~tvGIiG~G~IG~~va~~ 159 (334)
T 3kb6_A 96 -------YSPESVAEHTFAMILTLVKRLKRIEDRVKK--LNFSQDSEILAR-------ELNRLTLGVIGTGRIGSRVAMY 159 (334)
T ss_dssp -------SCHHHHHHHHHHHHHHHHTTHHHHHHHHHT--TCCCCCGGGCBC-------CGGGSEEEEECCSHHHHHHHHH
T ss_pred -------cCcHHHHHHHHHHHHHHhhccccccccccc--cccccccccccc-------eecCcEEEEECcchHHHHHHHh
Confidence 0111111111111 11111111222 234332111111 345567777 999999999
Q ss_pred HhhcCCCC--CCCCCCCccccCCeeeeehhhhcccCcEEEE----ccCCCCccCHhHHhcCCCCcEEEccCCCCcccccc
Q psy4626 278 AKYMGLNK--AGPFKPSYYSMDGFSVVKLNEVIRTVDIVVT----ATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVN 351 (542)
Q Consensus 278 a~~lg~~e--~~p~~a~ea~mdG~~v~~~~~a~~~~d~~~t----~tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~~ 351 (542)
++++|+.. .||.+.-...-.|+...+++|++++||||+. +..|+++|+.+.|++||+||+|+|+||+.+ ||-+
T Consensus 160 ~~~fg~~v~~~d~~~~~~~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~i-Vde~ 238 (334)
T 3kb6_A 160 GLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKV-VDTD 238 (334)
T ss_dssp HHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGG-BCHH
T ss_pred hcccCceeeecCCccchhhhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCcccc-ccHH
Confidence 99999953 3677766666678888899999999999999 778999999999999999999999999987 6766
Q ss_pred cccC
Q psy4626 352 SLRT 355 (542)
Q Consensus 352 ~l~~ 355 (542)
+|-+
T Consensus 239 aL~~ 242 (334)
T 3kb6_A 239 ALYR 242 (334)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 53
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.07 E-value=4.7e-10 Score=118.06 Aligned_cols=91 Identities=24% Similarity=0.354 Sum_probs=78.6
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee---C-------------------------
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV---K------------------------- 125 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~---~------------------------- 125 (542)
.+.|++|+|+|+|.+|+.+++.|+++|++|+++|+++.++.++...|..++ .
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 568999999999999999999999999999999999988777766776543 1
Q ss_pred --HHHHhcCCcEEEEcC---C--CcccCCHHHHhccCCCeEEEecc
Q psy4626 126 --LNEVIRTVDIVVTAT---G--NKNVVTREHMDKMKNGCVVCNMG 164 (542)
Q Consensus 126 --l~e~l~~aDvVi~at---G--~~~lI~~e~l~~mk~GailvnvG 164 (542)
+.+.++++|+||+|+ | ++++++.+.++.||+|++++++|
T Consensus 249 ~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 456678999999998 6 34578889999999999999999
No 54
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.07 E-value=4.3e-10 Score=119.24 Aligned_cols=90 Identities=26% Similarity=0.425 Sum_probs=77.7
Q ss_pred ccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeC----------------------------H
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVK----------------------------L 126 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~----------------------------l 126 (542)
+.|++|+|+|+|.||+.+++.|+++|++|+++|+++.++.++...|...+. +
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 679999999999999999999999999999999999887776667766442 4
Q ss_pred HHHhcCCcEEEEcC---C--CcccCCHHHHhccCCCeEEEecc
Q psy4626 127 NEVIRTVDIVVTAT---G--NKNVVTREHMDKMKNGCVVCNMG 164 (542)
Q Consensus 127 ~e~l~~aDvVi~at---G--~~~lI~~e~l~~mk~GailvnvG 164 (542)
.+.+.++|+||+++ | ++.+++.+.++.||+|++++++|
T Consensus 250 ~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 250 AAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 56678899999995 3 34678889999999999999999
No 55
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.06 E-value=3.3e-10 Score=118.24 Aligned_cols=220 Identities=18% Similarity=0.233 Sum_probs=143.3
Q ss_pred HHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcc
Q psy4626 90 KGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTE 169 (542)
Q Consensus 90 ~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~e 169 (542)
..+.+.|...|.+|++++.... ....+.+.++++|+++.....+.-++++.++.+++-..+...|.|-+.
T Consensus 30 l~~~~~L~~~g~ev~~~~~~~~----------~~~~~~~~~~~ad~li~~~~~~~~~~~~~l~~~p~Lk~i~~~g~G~d~ 99 (351)
T 3jtm_A 30 LGIRDWLESQGHQYIVTDDKEG----------PDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDH 99 (351)
T ss_dssp GGCHHHHHHTTCEEEEESCCSS----------TTSHHHHHTTTCSEEEECTTSCCCBCHHHHHHCSSCCEEEESSSCCTT
T ss_pred HHHHHHHHHCCCEEEEeCCCCC----------CHHHHHHHhCCCEEEEEccCCCCCCCHHHHhhCCCCeEEEEeCeeecc
Confidence 4567888899999988752211 001245667899999976544445788999999988999999999888
Q ss_pred cChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCCcccccCCCChhHHHh------hHHHHHHHHHHHHhcCCCCCC
Q psy4626 170 IDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLSCSSLPSFVVS------ITACTQALALIELFNAPSGRY 243 (542)
Q Consensus 170 id~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLvnl~~~thp~~vmd------~sfa~q~la~~~L~~~~~~~~ 243 (542)
+|+++..++++.+..... .| ...+-+ ++++.++.......++ ++|
T Consensus 100 id~~~a~~~gI~V~n~~g---------------------~~------~~~vAE~~~~l~L~~~R~~~~~~~~~~~--g~W 150 (351)
T 3jtm_A 100 IDLQAAAAAGLTVAEVTG---------------------SN------VVSVAEDELMRILILMRNFVPGYNQVVK--GEW 150 (351)
T ss_dssp BCHHHHHHTTCEEEECTT---------------------TT------HHHHHHHHHHHHHHHHHTHHHHHHHHHT--TCC
T ss_pred cCHHHHHhcCeeEEECCC---------------------cC------chHHHHHHHHHHHHHhhCcHHHHHHHHc--CCC
Confidence 999988765554443211 01 111111 2222222222222232 467
Q ss_pred CCccccCChhhHHHHHHhcCCcccc----ccccccHHHHhhcCCCC--CCCC--CCCccccCCeeee-ehhhhcccCcEE
Q psy4626 244 KSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQAKYMGLNK--AGPF--KPSYYSMDGFSVV-KLNEVIRTVDIV 314 (542)
Q Consensus 244 ~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~a~~lg~~e--~~p~--~a~ea~mdG~~v~-~~~~a~~~~d~~ 314 (542)
...-...+ --++..+++|+ .|++..+++++++|+.. .||. +.-.+...|++.. +++|+++++|||
T Consensus 151 ~~~~~~~~------~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV 224 (351)
T 3jtm_A 151 NVAGIAYR------AYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVI 224 (351)
T ss_dssp CHHHHHTT------CCCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEE
T ss_pred ccccccCC------cccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEE
Confidence 53210000 01345567776 89999999999999942 2333 2223333466655 899999999999
Q ss_pred EE----ccCCCCccCHhHHhcCCCCcEEEccCCCCcccccccccC
Q psy4626 315 VT----ATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRT 355 (542)
Q Consensus 315 ~t----~tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~~~l~~ 355 (542)
++ +..++++|+.+.|+.||+|++|+|+|++.. +|-++|.+
T Consensus 225 ~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~-vde~aL~~ 268 (351)
T 3jtm_A 225 VINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAI-MERQAVVD 268 (351)
T ss_dssp EECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGG-BCHHHHHH
T ss_pred EECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchh-hCHHHHHH
Confidence 99 346889999999999999999999999887 45555543
No 56
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.02 E-value=8.5e-10 Score=116.03 Aligned_cols=91 Identities=25% Similarity=0.328 Sum_probs=78.3
Q ss_pred ccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeC--------------------------HHH
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVK--------------------------LNE 128 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~--------------------------l~e 128 (542)
+++++|+|+|+|.+|+.+++.|+++|++|+++|+++.++.++...|..+.+ +.+
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 578999999999999999999999999999999999988777766765432 346
Q ss_pred HhcCCcEEEEcC---C--CcccCCHHHHhccCCCeEEEeccC
Q psy4626 129 VIRTVDIVVTAT---G--NKNVVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 129 ~l~~aDvVi~at---G--~~~lI~~e~l~~mk~GailvnvG~ 165 (542)
+++++|+||.+. | .+.+++++.++.||+|+++++++.
T Consensus 262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAG 303 (381)
T ss_dssp HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeC
Confidence 779999999974 3 446789999999999999999984
No 57
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.00 E-value=1e-09 Score=116.26 Aligned_cols=92 Identities=29% Similarity=0.450 Sum_probs=78.0
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee-----------------------------
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV----------------------------- 124 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~----------------------------- 124 (542)
.+++.+|+|+|+|++|+.+++.|+++|++|+++|+++.++..+...|..++
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence 357899999999999999999999999999999999988776666665422
Q ss_pred -CHHHHhcCCcEEEEcC---C--CcccCCHHHHhccCCCeEEEeccC
Q psy4626 125 -KLNEVIRTVDIVVTAT---G--NKNVVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 125 -~l~e~l~~aDvVi~at---G--~~~lI~~e~l~~mk~GailvnvG~ 165 (542)
++.++++++|+||+|. | .+.+++++.++.||+|+++++++.
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred hHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence 3456678999999984 3 556889999999999999999983
No 58
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.93 E-value=1.9e-09 Score=113.21 Aligned_cols=92 Identities=20% Similarity=0.259 Sum_probs=76.2
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-CCcee-------eCHHHHhcCCcEEEEcCCC---
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-DGFSV-------VKLNEVIRTVDIVVTATGN--- 142 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-~G~~v-------~~l~e~l~~aDvVi~atG~--- 142 (542)
.+.|++|+|+|+|.||+.+++.++++|++|+++|+++.++..+.. .|..+ .++++.++++|+||+|++.
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~ 244 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA 244 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 478999999999999999999999999999999999987665543 45431 2355677899999998753
Q ss_pred --cccCCHHHHhccCCCeEEEeccC
Q psy4626 143 --KNVVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 143 --~~lI~~e~l~~mk~GailvnvG~ 165 (542)
+++++.+.++.||+|++++|+|.
T Consensus 245 ~t~~li~~~~l~~mk~g~~iV~va~ 269 (377)
T 2vhw_A 245 KAPKLVSNSLVAHMKPGAVLVDIAI 269 (377)
T ss_dssp CCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred CCcceecHHHHhcCCCCcEEEEEec
Confidence 35677889999999999999993
No 59
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=98.88 E-value=9.8e-09 Score=107.13 Aligned_cols=109 Identities=18% Similarity=0.271 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHhhcCc-cccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhc-CC
Q psy4626 56 LYMCRESIIDSLKRSTDV-MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIR-TV 133 (542)
Q Consensus 56 ~~g~~~s~~~ai~r~~~~-~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~-~a 133 (542)
.||+-.++-.++... +. .+.||+|+|+|+|+||+.+|+.|+++|++|+++|+++.+...+...|.+.++.++++. .+
T Consensus 154 g~Gv~~~~~~~~~~~-G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~ 232 (355)
T 1c1d_A 154 AVGVFEAMKATVAHR-GLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPC 232 (355)
T ss_dssp HHHHHHHHHHHHHHT-TCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCC
T ss_pred HHHHHHHHHHHHHhc-CCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCcc
Confidence 334443333344333 55 6899999999999999999999999999999999998764334456777778888876 89
Q ss_pred cEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC
Q psy4626 134 DIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 134 DvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
|+++-|. +.+.|+.+.++.|| ..+++|.++++
T Consensus 233 DIliP~A-~~~~I~~~~~~~lk-~~iVie~AN~p 264 (355)
T 1c1d_A 233 DVFAPCA-MGGVITTEVARTLD-CSVVAGAANNV 264 (355)
T ss_dssp SEEEECS-CSCCBCHHHHHHCC-CSEECCSCTTC
T ss_pred ceecHhH-HHhhcCHHHHhhCC-CCEEEECCCCC
Confidence 9999864 67799999999997 67899999875
No 60
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.84 E-value=8.5e-09 Score=106.82 Aligned_cols=189 Identities=14% Similarity=0.222 Sum_probs=124.6
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.++++|+++.... .-++++.++.+++-..+...|.|-+.+|++++.++++.+.....
T Consensus 38 ~~~~~~d~li~~~~--~~i~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~-------------------- 95 (334)
T 2pi1_A 38 NELKKAELISVFVY--DKLTEELLSKMPRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPA-------------------- 95 (334)
T ss_dssp HHHHHCSEEEECTT--SCBCHHHHTTCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCTT--------------------
T ss_pred HHhcCCeEEEEcCC--CCCCHHHHhhCCCCeEEEECCccccccCHHHHHHCCeEEEECCC--------------------
Confidence 45688999987532 25778899999998888899999888999888755444432210
Q ss_pred cccccCCCChhHHHh------hHHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHH
Q psy4626 208 LVNLSCSSLPSFVVS------ITACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQ 277 (542)
Q Consensus 208 Lvnl~~~thp~~vmd------~sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~ 277 (542)
. ++..+-+ ++++.++.......++ ++|......... ++..+++|+ .|++-.+++
T Consensus 96 ------~-~~~~vAE~~~~l~L~~~R~~~~~~~~~~~--g~w~~~~~~~~~-------~l~g~tvgIiG~G~IG~~vA~~ 159 (334)
T 2pi1_A 96 ------Y-SPESVAEHTFAMILTLVKRLKRIEDRVKK--LNFSQDSEILAR-------ELNRLTLGVIGTGRIGSRVAMY 159 (334)
T ss_dssp ------S-CHHHHHHHHHHHHHHHHTTHHHHHHHHTT--TCCCCCGGGCBC-------CGGGSEEEEECCSHHHHHHHHH
T ss_pred ------c-CcHHHHHHHHHHHHHHHHhHHHHHHHHHc--CCCccccCccce-------eccCceEEEECcCHHHHHHHHH
Confidence 0 1111111 1122222111222222 466543100111 345567776 889999999
Q ss_pred HhhcCCCC--CCCCCCCccccCCeeeeehhhhcccCcEEEEc----cCCCCccCHhHHhcCCCCcEEEccCCCCcccccc
Q psy4626 278 AKYMGLNK--AGPFKPSYYSMDGFSVVKLNEVIRTVDIVVTA----TGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVN 351 (542)
Q Consensus 278 a~~lg~~e--~~p~~a~ea~mdG~~v~~~~~a~~~~d~~~t~----tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~~ 351 (542)
++++|+.. .||...-+..-.|++..+++|+++++|+|++. ..++++|+.+.|+.||+|++++|+|++.. +|-+
T Consensus 160 l~~~G~~V~~~d~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~-vd~~ 238 (334)
T 2pi1_A 160 GLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKV-VDTD 238 (334)
T ss_dssp HHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGG-BCHH
T ss_pred HHHCcCEEEEECCCcchhhHhcCceecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcc-cCHH
Confidence 99999842 34443322223588888999999999999993 47899999999999999999999999987 4555
Q ss_pred cccC
Q psy4626 352 SLRT 355 (542)
Q Consensus 352 ~l~~ 355 (542)
+|.+
T Consensus 239 aL~~ 242 (334)
T 2pi1_A 239 ALYR 242 (334)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5553
No 61
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.81 E-value=1.4e-08 Score=105.76 Aligned_cols=189 Identities=15% Similarity=0.209 Sum_probs=122.7
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhcc-CCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKM-KNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEG 206 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~m-k~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~G 206 (542)
+.++++|+++....+ -++++.++.+ ++-..|...|.|-+.+|++++.++++.+.....
T Consensus 67 ~~~~~~d~li~~~~~--~i~~~~l~~~~~~Lk~I~~~~~G~D~id~~~a~~~gI~V~n~pg------------------- 125 (345)
T 4g2n_A 67 SRAHGAEVLFVTATE--AITAEVIRKLQPGLKTIATLSVGYDHIDMAAARSLGIKVLHTPD------------------- 125 (345)
T ss_dssp HHTTTCSEEEECTTS--CBCHHHHHHTTTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCS-------------------
T ss_pred HHhcCCeEEEEeCCC--CCCHHHHHhhcCCceEEEEcCCcccccCHHHHHhCCEEEEECCc-------------------
Confidence 456899999875322 4778899988 566677788888788999988766554443211
Q ss_pred CcccccCCCChhHHHh------hHHHHHHHHHHHHhcCCCCCCCCccc-cCChhhHHHHHHhcCCcccc----ccccccH
Q psy4626 207 RLVNLSCSSLPSFVVS------ITACTQALALIELFNAPSGRYKSDVY-LLPKKMDEYVASLHLPTFDA----HLTELSD 275 (542)
Q Consensus 207 rLvnl~~~thp~~vmd------~sfa~q~la~~~L~~~~~~~~~~gv~-~lp~~~d~~VA~l~L~~lg~----~i~~lt~ 275 (542)
. +...+-+ ++++.++.......+. ++|...-. ..+. .++..+++|+ .|++-.+
T Consensus 126 -------~-~~~~vAE~a~~l~L~~~R~~~~~~~~~r~--g~W~~~~~~~~~g------~~l~gktvGIIGlG~IG~~vA 189 (345)
T 4g2n_A 126 -------V-LSDACAEIAMLLVLNACRRGYEADRMVRS--GSWPGWGPTQLLG------MGLTGRRLGIFGMGRIGRAIA 189 (345)
T ss_dssp -------C-CHHHHHHHHHHHHHHHHHTHHHHHHHHHT--TCCCCCCTTTTCB------CCCTTCEEEEESCSHHHHHHH
T ss_pred -------c-cchHHHHHHHHHHHHHHhCHHHHHHHHHc--CCCcccCcccccc------cccCCCEEEEEEeChhHHHHH
Confidence 0 1111111 2222222222223333 46653110 0000 1345567777 8999999
Q ss_pred HHHhhcCCCC--CCCCCCCccccCCeeee-ehhhhcccCcEEEEcc----CCCCccCHhHHhcCCCCcEEEccCCCCccc
Q psy4626 276 EQAKYMGLNK--AGPFKPSYYSMDGFSVV-KLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGHSNTEI 348 (542)
Q Consensus 276 ~~a~~lg~~e--~~p~~a~ea~mdG~~v~-~~~~a~~~~d~~~t~t----g~~~vi~~~~~~~mk~gail~n~gh~~~Ei 348 (542)
++++++|+.. .||...-.....|++.. +++|+++++|||++.+ .++++|+.+.|+.||+|++++|+|++.+ +
T Consensus 190 ~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~-v 268 (345)
T 4g2n_A 190 TRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDL-I 268 (345)
T ss_dssp HHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGG-B
T ss_pred HHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCch-h
Confidence 9999999942 35543222222387776 8999999999999944 3789999999999999999999999987 3
Q ss_pred cccccc
Q psy4626 349 DVNSLR 354 (542)
Q Consensus 349 ~~~~l~ 354 (542)
|-++|.
T Consensus 269 de~aL~ 274 (345)
T 4g2n_A 269 NDDALI 274 (345)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 544444
No 62
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.80 E-value=1.9e-08 Score=104.06 Aligned_cols=188 Identities=12% Similarity=0.098 Sum_probs=122.5
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.++++|+++....+ -++++.++.+++-..+...|.|-+.+|++++.++++.+.....
T Consensus 41 ~~~~~~d~~i~~~~~--~i~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~~~-------------------- 98 (330)
T 4e5n_A 41 RRCRDAQAMMAFMPD--RVDADFLQACPELRVIGCALKGFDNFDVDACTARGVWLTFVPD-------------------- 98 (330)
T ss_dssp HHHTTCSEEEECTTC--CBCHHHHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCSS--------------------
T ss_pred HHhCCCeEEEEeCCC--CCCHHHHhhCCCCcEEEECCCcccccCHHHHHhcCcEEEeCCC--------------------
Confidence 456899999874323 5778899999888889999999888999988765554432210
Q ss_pred cccccCCCChhHHHhh------HHHHHHHHHHHHhcCCCCCCCCcc-ccCChhhHHHHHHhcCCcccc----ccccccHH
Q psy4626 208 LVNLSCSSLPSFVVSI------TACTQALALIELFNAPSGRYKSDV-YLLPKKMDEYVASLHLPTFDA----HLTELSDE 276 (542)
Q Consensus 208 Lvnl~~~thp~~vmd~------sfa~q~la~~~L~~~~~~~~~~gv-~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~ 276 (542)
.++..+-+. +++.++.......++ ++|..-- ..... ++..+++|+ .|++..++
T Consensus 99 -------~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~--g~w~~~~~~~~~~-------~l~g~tvGIIG~G~IG~~vA~ 162 (330)
T 4e5n_A 99 -------LLTVPTAELAIGLAVGLGRHLRAADAFVRS--GKFRGWQPRFYGT-------GLDNATVGFLGMGAIGLAMAD 162 (330)
T ss_dssp -------TTHHHHHHHHHHHHHHHHTTHHHHHHHHHT--TCCCSCCSCCCCC-------CSTTCEEEEECCSHHHHHHHH
T ss_pred -------CCchHHHHHHHHHHHHHHhChHHHHHHHHh--CCccccCccccCC-------ccCCCEEEEEeeCHHHHHHHH
Confidence 011111111 122222111122232 3454100 11111 245566766 88888899
Q ss_pred HHhhcCCC--CCCCCC--CCccccCCeeeeehhhhcccCcEEEEc----cCCCCccCHhHHhcCCCCcEEEccCCCCccc
Q psy4626 277 QAKYMGLN--KAGPFK--PSYYSMDGFSVVKLNEVIRTVDIVVTA----TGNKNVVTREHMDKMKNGCVVCNMGHSNTEI 348 (542)
Q Consensus 277 ~a~~lg~~--e~~p~~--a~ea~mdG~~v~~~~~a~~~~d~~~t~----tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei 348 (542)
+++++|+. -.||.. ...+.-.|++..+++|+++++|+|+++ ..++++|+.+.|+.||+|++++|+|++.. +
T Consensus 163 ~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~-v 241 (330)
T 4e5n_A 163 RLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSV-V 241 (330)
T ss_dssp HTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGG-B
T ss_pred HHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCch-h
Confidence 99999984 234443 223334588778999999999999994 36889999999999999999999999876 4
Q ss_pred cccccc
Q psy4626 349 DVNSLR 354 (542)
Q Consensus 349 ~~~~l~ 354 (542)
|-++|.
T Consensus 242 d~~aL~ 247 (330)
T 4e5n_A 242 DEAAVL 247 (330)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 544444
No 63
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=98.78 E-value=1.3e-08 Score=106.52 Aligned_cols=93 Identities=22% Similarity=0.311 Sum_probs=74.3
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-CCcee-------eCHHHHhcCCcEEEEcCCCc--
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-DGFSV-------VKLNEVIRTVDIVVTATGNK-- 143 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-~G~~v-------~~l~e~l~~aDvVi~atG~~-- 143 (542)
.+.|++|+|+|+|.||+.+++.|+++|++|+++|+++.+...+.. .|..+ .+++++++++|+||+|+|..
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~ 242 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGA 242 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcc
Confidence 377899999999999999999999999999999999987665443 44432 13456678999999998743
Q ss_pred ---ccCCHHHHhccCCCeEEEeccCC
Q psy4626 144 ---NVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 144 ---~lI~~e~l~~mk~GailvnvG~g 166 (542)
.++..+.++.||+|++++|+|..
T Consensus 243 ~~~~li~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 243 KAPKLVTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp ---CCSCHHHHTTSCTTCEEEECC--
T ss_pred ccchhHHHHHHHhhcCCCEEEEEecC
Confidence 45678899999999999999954
No 64
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.78 E-value=8.8e-08 Score=101.89 Aligned_cols=223 Identities=14% Similarity=0.180 Sum_probs=134.7
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCCCcccCCHHHHhccCCC
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNG 157 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~G 157 (542)
+|++. .++.......++..|. .|...+... ....+.+.++++|+++..+.+ .++++.|+.+++-
T Consensus 17 kIl~~--~~i~~~~~~~l~~~g~~~v~~~~~~~-----------~~~~l~~~~~~~d~l~v~~~~--~i~~~~l~~~p~L 81 (416)
T 3k5p_A 17 NVLLL--EGISQTAVEYFKSSGYTNVTHLPKAL-----------DKADLIKAISSAHIIGIRSRT--QLTEEIFAAANRL 81 (416)
T ss_dssp CEEEC--SCCCHHHHHHHHHTTCCCEEECSSCC-----------CHHHHHHHHTTCSEEEECSSC--CBCHHHHHHCTTC
T ss_pred EEEEE--CCCCHHHHHHHHHCCCcEEEECCCCC-----------CHHHHHHHccCCEEEEEcCCC--CCCHHHHHhCCCc
Confidence 34443 3444444556666776 554432110 001123456899998765323 5788899999888
Q ss_pred eEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCCcccccCCCChhHHHhhHHHH------HHHH
Q psy4626 158 CVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLSCSSLPSFVVSITACT------QALA 231 (542)
Q Consensus 158 ailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLvnl~~~thp~~vmd~sfa~------q~la 231 (542)
..+...|.|-+.+|+++..++++.+..... . ++..+-+..++. ++..
T Consensus 82 k~I~~~~~G~d~IDl~~a~~~GI~V~n~p~---------------------~------n~~aVAE~~l~l~L~l~R~i~~ 134 (416)
T 3k5p_A 82 IAVGCFSVGTNQVELKAARKRGIPVFNAPF---------------------S------NTRSVAELVIGEIIMLMRRIFP 134 (416)
T ss_dssp CEEEECSSCCTTBCHHHHHHTTCCEECCSS---------------------T------THHHHHHHHHHHHHHHHTTHHH
T ss_pred EEEEECccccCccCHHHHHhcCcEEEeCCC---------------------c------ccHHHHHHHHHHHHHHhcccHH
Confidence 888898999889999988866655543211 0 111111111111 1111
Q ss_pred HHHHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHHHhhcCCCC--CCCCCCCccccCCeeeeehh
Q psy4626 232 LIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQAKYMGLNK--AGPFKPSYYSMDGFSVVKLN 305 (542)
Q Consensus 232 ~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~a~~lg~~e--~~p~~a~ea~mdG~~v~~~~ 305 (542)
....... ++|...-.. .. ++..+++|+ .|++..+++++++|+.. .||...... -....+.+++
T Consensus 135 ~~~~~~~--g~W~~~~~~-~~-------el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~-~~~~~~~sl~ 203 (416)
T 3k5p_A 135 RSVSAHA--GGWEKTAIG-SR-------EVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQY-GNVKPAASLD 203 (416)
T ss_dssp HHHHHHT--TCCCCCCTT-CC-------CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCB-TTBEECSSHH
T ss_pred HHHhhhc--ccccccCCC-Cc-------cCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhcc-cCcEecCCHH
Confidence 1112222 567653211 11 345677777 89999999999999942 244433222 1224556899
Q ss_pred hhcccCcEEEE----ccCCCCccCHhHHhcCCCCcEEEccCCCCcccccccccC
Q psy4626 306 EVIRTVDIVVT----ATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRT 355 (542)
Q Consensus 306 ~a~~~~d~~~t----~tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~~~l~~ 355 (542)
|++++||+|++ +..++++|+.+.|+.||+|++++|++++.+ +|-++|.+
T Consensus 204 ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~v-vd~~aL~~ 256 (416)
T 3k5p_A 204 ELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSD-VDLEALAK 256 (416)
T ss_dssp HHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTS-BCHHHHHH
T ss_pred HHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChh-hhHHHHHH
Confidence 99999999999 445789999999999999999999999987 45555543
No 65
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.73 E-value=3.7e-08 Score=103.66 Aligned_cols=171 Identities=13% Similarity=0.162 Sum_probs=116.6
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.++++|+++....+ -++++.++ .++-..+...|.|-+.+|++++.++++.+....
T Consensus 36 ~~l~~ad~li~~~~~--~v~~~ll~-~~~Lk~I~~~~~G~D~iD~~~~~~~gI~v~n~p--------------------- 91 (381)
T 3oet_A 36 EELNHADALMVRSVT--KVNESLLS-GTPINFVGTATAGTDHVDEAWLKQAGIGFSAAP--------------------- 91 (381)
T ss_dssp HHHTTCSEEEECTTS--CBSHHHHT-TSCCCEEEESSSCCTTBCHHHHHHTTCEEECCT---------------------
T ss_pred HHHCCCEEEEECCCC--CCCHHHHc-CCCCEEEEEccccccccCHHHHHhCCEEEEECC---------------------
Confidence 447899999875433 46777888 455777888888888899998876544333221
Q ss_pred cccccCCCChhHHHhhHHHHHHHHHH-HHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHHHhhcC
Q psy4626 208 LVNLSCSSLPSFVVSITACTQALALI-ELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQAKYMG 282 (542)
Q Consensus 208 Lvnl~~~thp~~vmd~sfa~q~la~~-~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~a~~lg 282 (542)
. .+ ..+.|..+++.+ .+.++ ... ++..+++|+ .|++-.+++++++|
T Consensus 92 -----g-~~-----~~~VAE~~l~~lL~l~r~----~g~--------------~l~gktvGIIGlG~IG~~vA~~l~a~G 142 (381)
T 3oet_A 92 -----G-CN-----AIAVVEYVFSALLMLAER----DGF--------------SLRDRTIGIVGVGNVGSRLQTRLEALG 142 (381)
T ss_dssp -----T-TT-----HHHHHHHHHHHHHHHHHH----TTC--------------CGGGCEEEEECCSHHHHHHHHHHHHTT
T ss_pred -----C-cC-----cchhHHHHHHHHHHHHHh----cCC--------------ccCCCEEEEEeECHHHHHHHHHHHHCC
Confidence 0 01 123344444433 22221 111 345567776 89999999999999
Q ss_pred CC--CCCCCCCCccccCCeeeeehhhhcccCcEEEEccC--------CCCccCHhHHhcCCCCcEEEccCCCCccccccc
Q psy4626 283 LN--KAGPFKPSYYSMDGFSVVKLNEVIRTVDIVVTATG--------NKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNS 352 (542)
Q Consensus 283 ~~--e~~p~~a~ea~mdG~~v~~~~~a~~~~d~~~t~tg--------~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~~~ 352 (542)
+. -.||.+..+. ++....+++|++++||||++.+- ++++|+.+.|+.||+|++|+|+|++.+ ||-++
T Consensus 143 ~~V~~~d~~~~~~~--~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~v-vde~a 219 (381)
T 3oet_A 143 IRTLLCDPPRAARG--DEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPV-VDNAA 219 (381)
T ss_dssp CEEEEECHHHHHTT--CCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGG-BCHHH
T ss_pred CEEEEECCChHHhc--cCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcc-cCHHH
Confidence 84 3356443222 56667799999999999999542 889999999999999999999999987 45444
Q ss_pred cc
Q psy4626 353 LR 354 (542)
Q Consensus 353 l~ 354 (542)
|.
T Consensus 220 L~ 221 (381)
T 3oet_A 220 LL 221 (381)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 66
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=98.71 E-value=5.2e-08 Score=100.30 Aligned_cols=121 Identities=12% Similarity=0.127 Sum_probs=92.8
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eC-HHHHhcCCcEEEE
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VK-LNEVIRTVDIVVT 138 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~-l~e~l~~aDvVi~ 138 (542)
...|+++.+. ...+|++|+|+|.|.||+.+++.++.+|++|++++.++.+...+...|++. +. .+...+++|++++
T Consensus 163 ~ta~~~l~~~--~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid 240 (348)
T 3two_A 163 ITTYSPLKFS--KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIIS 240 (348)
T ss_dssp HHHHHHHHHT--TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEE
T ss_pred HHHHHHHHhc--CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEE
Confidence 4456777665 346899999999999999999999999999999999999988888888763 22 2222348999999
Q ss_pred cCCCcccCCHHHHhccCCCeEEEeccCCC-cc---cChHhhc-CCCcceee
Q psy4626 139 ATGNKNVVTREHMDKMKNGCVVCNMGHSN-TE---IDVNSLR-TPDLTWEK 184 (542)
Q Consensus 139 atG~~~lI~~e~l~~mk~GailvnvG~g~-~e---id~~aL~-~~~l~v~~ 184 (542)
++|....+ .+.++.+++++.++.+|... .. ++...+. .+++++.+
T Consensus 241 ~~g~~~~~-~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g 290 (348)
T 3two_A 241 TIPTHYDL-KDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYG 290 (348)
T ss_dssp CCCSCCCH-HHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEE
T ss_pred CCCcHHHH-HHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEE
Confidence 99987666 47899999999999998765 32 4444444 45555444
No 67
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.71 E-value=6.9e-08 Score=100.36 Aligned_cols=225 Identities=13% Similarity=0.096 Sum_probs=135.1
Q ss_pred EEEEEcCChhHHHHHHH-HHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCCCcccCCHH-HHhccCC
Q psy4626 79 QVVLCGYGEVGKGCCQS-LKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATGNKNVVTRE-HMDKMKN 156 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~-l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e-~l~~mk~ 156 (542)
+++|++.-..-...... ++.+|.+|..++... . ....+.++++|+++....+ -++++ .++.++.
T Consensus 3 ki~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-----------~~~~~~~~~~d~li~~~~~--~~~~~~~l~~~~~ 68 (343)
T 2yq5_A 3 KIAMYNVSPIEVPYIEDWAKKNDVEIKTTDQAL-T-----------SATVDLAEGCSSVSLKPLG--PVDEEVVYQKLSE 68 (343)
T ss_dssp EEEEESCCGGGHHHHHHHHHHHTCEEEEESSCC-S-----------TTGGGGGTTCSEEEECCSS--CBCCHHHHHHHHH
T ss_pred eEEEEecCcccHHHHHHHHHhCCeEEEECCCCC-C-----------HHHHHHhcCCcEEEEcCCC--CcCHHHHHHhccc
Confidence 56777765655444433 345677776664211 0 0123456899999875322 46678 8888853
Q ss_pred --CeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCCcccccCCCChhHHHhhHHHH------H
Q psy4626 157 --GCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLSCSSLPSFVVSITACT------Q 228 (542)
Q Consensus 157 --GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLvnl~~~thp~~vmd~sfa~------q 228 (542)
-..+...|.|-+.+|++++.++++.+..+.. .++..+-+..++. +
T Consensus 69 ~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~---------------------------~~~~~vAE~~~~l~L~~~R~ 121 (343)
T 2yq5_A 69 YGVKCIGLRIVGFNTINFDWTKKYNLLVTNVPV---------------------------YSPRAIAEMTVTQAMYLLRK 121 (343)
T ss_dssp TTCCEEEESSSCCTTBCSSTTCC--CEEECCSC---------------------------SCHHHHHHHHHHHHHHHHHT
T ss_pred cCceEEEECceeecccchhHHHhCCEEEEECCC---------------------------CCcHHHHHHHHHHHHHHHhc
Confidence 3567788888788898888765544432210 0111111222221 1
Q ss_pred HHHHHHHhc-CCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHHHhhcCCCC--CCCCCCCccccCCeee
Q psy4626 229 ALALIELFN-APSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQAKYMGLNK--AGPFKPSYYSMDGFSV 301 (542)
Q Consensus 229 ~la~~~L~~-~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~a~~lg~~e--~~p~~a~ea~mdG~~v 301 (542)
+.......+ .+.-.|... ..+. ++..+++|+ .|++..+++++++|+.. .||...- +.-.+.+.
T Consensus 122 ~~~~~~~~~~~g~~~w~~~--~~~~-------~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~~~ 191 (343)
T 2yq5_A 122 IGEFRYRMDHDHDFTWPSN--LISN-------EIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP-EFEPFLTY 191 (343)
T ss_dssp HHHHHHHHHHHCCCCCCGG--GCBC-------CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCG-GGTTTCEE
T ss_pred hHHHHHHHHHcCCcccccC--CCcc-------ccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhh-hhhccccc
Confidence 111111111 210123221 1111 345566666 88999999999999942 2444332 22345666
Q ss_pred eehhhhcccCcEEEEc----cCCCCccCHhHHhcCCCCcEEEccCCCCcccccccccC
Q psy4626 302 VKLNEVIRTVDIVVTA----TGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRT 355 (542)
Q Consensus 302 ~~~~~a~~~~d~~~t~----tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~~~l~~ 355 (542)
.+++|+++++|||++. ..++++|+.+.|+.||+|++|+|+|++.. +|-++|.+
T Consensus 192 ~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~-vd~~aL~~ 248 (343)
T 2yq5_A 192 TDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGEL-VDTGALIK 248 (343)
T ss_dssp CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGG-BCHHHHHH
T ss_pred cCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChh-hhHHHHHH
Confidence 6999999999999993 46799999999999999999999999988 45555543
No 68
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.70 E-value=2.9e-08 Score=103.59 Aligned_cols=92 Identities=20% Similarity=0.257 Sum_probs=74.2
Q ss_pred ccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce---ee-----CHHHHhcCCcEEEEcCCCcc--
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS---VV-----KLNEVIRTVDIVVTATGNKN-- 144 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~---v~-----~l~e~l~~aDvVi~atG~~~-- 144 (542)
+.+++|+|+|+|.+|+.+++.|+.+|++|+++|+++.++..+...+.. +. ++.+.+.++|+||+|++.+.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~ 244 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRR 244 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCC
Confidence 567999999999999999999999999999999999887665443321 11 23456678999999987543
Q ss_pred ---cCCHHHHhccCCCeEEEeccCC
Q psy4626 145 ---VVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 145 ---lI~~e~l~~mk~GailvnvG~g 166 (542)
++..+.++.|++|+++++++..
T Consensus 245 ~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 245 APILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp CCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred CCeecCHHHHhhCCCCCEEEEEecC
Confidence 3567889999999999999864
No 69
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.70 E-value=4.2e-08 Score=101.89 Aligned_cols=184 Identities=16% Similarity=0.208 Sum_probs=107.0
Q ss_pred hcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCCcc
Q psy4626 130 IRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLV 209 (542)
Q Consensus 130 l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLv 209 (542)
++++|+++....+ -++++.++.+++-..+...|.|-+.+|++++.++++.+..... .
T Consensus 69 ~~~~d~li~~~~~--~i~~~~l~~~p~Lk~I~~~g~G~d~id~~~a~~~gI~V~n~pg---------------------~ 125 (340)
T 4dgs_A 69 LPSIRAVATGGGA--GLSNEWMEKLPSLGIIAINGVGTDKVDLARARRRNIDVTTTPG---------------------V 125 (340)
T ss_dssp GGGCCEEEEETTT--CBCHHHHHHCSSCCEEEEESSCCTTBCHHHHHHTTCEEECCCS---------------------S
T ss_pred hCCcEEEEEcCCC--CCCHHHHhhCCCCEEEEECCCCccccCHHHHHhCCEEEEECCC---------------------C
Confidence 3789999864322 3678899999988899999999888999988766554443211 0
Q ss_pred cccCCCChhHHHh------hHHHHHHHHHHHHhcCCCCCCCCc-cccCChhhHHHHHHhcCCcccc----ccccccHHHH
Q psy4626 210 NLSCSSLPSFVVS------ITACTQALALIELFNAPSGRYKSD-VYLLPKKMDEYVASLHLPTFDA----HLTELSDEQA 278 (542)
Q Consensus 210 nl~~~thp~~vmd------~sfa~q~la~~~L~~~~~~~~~~g-v~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~a 278 (542)
+...+-+ ++++.++-......++ ++|... -+.+. -++..+++|+ .|++..++++
T Consensus 126 ------~~~~vAE~a~~l~L~~~R~~~~~~~~~~~--g~W~~~~~~~~~-------~~l~gktiGIIGlG~IG~~vA~~l 190 (340)
T 4dgs_A 126 ------LADDVADLGIALMLAVLRRVGDGDRLVRE--GRWAAGEQLPLG-------HSPKGKRIGVLGLGQIGRALASRA 190 (340)
T ss_dssp ------SHHHHHHHHHHHHHHHHTTHHHHHHHHHT--TCC------CCC-------CCCTTCEEEEECCSHHHHHHHHHH
T ss_pred ------CcchHHHHHHHHHHHHHhChHHHHHHHhc--CCcccccCcCcc-------ccccCCEEEEECCCHHHHHHHHHH
Confidence 1111111 1222222222222232 467653 11111 1345567776 8899999999
Q ss_pred hhcCCCC--CCCCCCCccccCCee-eeehhhhcccCcEEEEc----cCCCCccCHhHHhcCCCCcEEEccCCCCcccccc
Q psy4626 279 KYMGLNK--AGPFKPSYYSMDGFS-VVKLNEVIRTVDIVVTA----TGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVN 351 (542)
Q Consensus 279 ~~lg~~e--~~p~~a~ea~mdG~~-v~~~~~a~~~~d~~~t~----tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~~ 351 (542)
+.+|+.. .||...-+ .++. +.+++|+++++|+|+++ ..++++|+.+.|+.||+|++++|++++.+ +|-+
T Consensus 191 ~~~G~~V~~~dr~~~~~---~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~v-vde~ 266 (340)
T 4dgs_A 191 EAFGMSVRYWNRSTLSG---VDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNV-VDED 266 (340)
T ss_dssp HTTTCEEEEECSSCCTT---SCCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC-------
T ss_pred HHCCCEEEEEcCCcccc---cCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcc-cCHH
Confidence 9999832 23332211 2333 34789999999999994 34789999999999999999999999988 6766
Q ss_pred cccC
Q psy4626 352 SLRT 355 (542)
Q Consensus 352 ~l~~ 355 (542)
+|.+
T Consensus 267 aL~~ 270 (340)
T 4dgs_A 267 ALIE 270 (340)
T ss_dssp ----
T ss_pred HHHH
Confidence 6665
No 70
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=98.68 E-value=9.1e-08 Score=99.47 Aligned_cols=121 Identities=16% Similarity=0.147 Sum_probs=89.7
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh-cCCce-eeCH------HHHhcC
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQAC-MDGFS-VVKL------NEVIRT 132 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~-~~G~~-v~~l------~e~l~~ 132 (542)
...|+++.+. +...+|++|+|+|+|.||+.+++.++.+|++|++++.++.+...+. ..|++ +++. .++..+
T Consensus 173 ~ta~~al~~~-~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~ 251 (366)
T 1yqd_A 173 ITVYSPLKYF-GLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGT 251 (366)
T ss_dssp HHHHHHHHHT-TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTC
T ss_pred HHHHHHHHhc-CcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCC
Confidence 3456676654 2323899999999999999999999999999999999998877665 67765 3321 223357
Q ss_pred CcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC--cccChHhhcCCCccee
Q psy4626 133 VDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN--TEIDVNSLRTPDLTWE 183 (542)
Q Consensus 133 aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~--~eid~~aL~~~~l~v~ 183 (542)
+|+||+++|....+ .+.++.|++++.++++|... .+++...+..+++++.
T Consensus 252 ~D~vid~~g~~~~~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~ 303 (366)
T 1yqd_A 252 LDGIIDTVSAVHPL-LPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVA 303 (366)
T ss_dssp EEEEEECCSSCCCS-HHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEE
T ss_pred CCEEEECCCcHHHH-HHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEE
Confidence 99999999976566 47899999999999999764 2345444544444443
No 71
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.67 E-value=3.7e-08 Score=103.20 Aligned_cols=223 Identities=17% Similarity=0.152 Sum_probs=135.3
Q ss_pred ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccC
Q psy4626 86 GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 86 G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~ 165 (542)
...-..+...++..|.+|..++.... ....+.+.++++|+++.......-++++.++.+++-..+...|.
T Consensus 24 d~~~~~~~~~l~~~~~~v~~~~~~~~----------~~~~~~~~~~~~d~~i~~~~~~~~~~~~~l~~~~~Lk~I~~~~~ 93 (364)
T 2j6i_A 24 TENKLGIANWLKDQGHELITTSDKEG----------GNSVLDQHIPDADIIITTPFHPAYITKERIDKAKKLKLVVVAGV 93 (364)
T ss_dssp TTTGGGCHHHHHHTTCEEEEESCCSS----------TTSHHHHHGGGCSEEEECTTSCCCBCHHHHHHCTTCCEEEESSS
T ss_pred cCccHHHHHHHHhCCCEEEEcCCCCC----------CHHHHHHHhhCCeEEEecCcCCCCCCHHHHhhCCCCeEEEECCc
Confidence 33334456677778888776642110 00123455788999987543333477888999988889999999
Q ss_pred CCcccChHhhcCC--CcceeeeccceeeEecCCCCEEEEecCCCcccccCCCChhHHHhhHHH------HHHHHHHHHhc
Q psy4626 166 SNTEIDVNSLRTP--DLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLSCSSLPSFVVSITAC------TQALALIELFN 237 (542)
Q Consensus 166 g~~eid~~aL~~~--~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLvnl~~~thp~~vmd~sfa------~q~la~~~L~~ 237 (542)
|-+.+|++++.++ ++.+.... .. ++..+-+..++ .++.......+
T Consensus 94 G~d~id~~~~~~~~~gI~V~n~p--------------------------g~-~~~~vAE~~~~~~L~~~R~~~~~~~~~~ 146 (364)
T 2j6i_A 94 GSDHIDLDYINQTGKKISVLEVT--------------------------GS-NVVSVAEHVVMTMLVLVRNFVPAHEQII 146 (364)
T ss_dssp CCTTBCHHHHHHHTCCCEEEECT--------------------------TS-SHHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred ccccccHHHHHhcCCCEEEEECC--------------------------Cc-CcHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 9888998887643 33333221 00 11111111111 11111111222
Q ss_pred CCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHHHhhcCCC-CC--CCCC--CCccccCCeeee-ehhhh
Q psy4626 238 APSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQAKYMGLN-KA--GPFK--PSYYSMDGFSVV-KLNEV 307 (542)
Q Consensus 238 ~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~a~~lg~~-e~--~p~~--a~ea~mdG~~v~-~~~~a 307 (542)
. ++|...-...+ --++..+++|+ .|++..+++++++|+. .. |+.. .-.+...|.+.. +++++
T Consensus 147 ~--g~W~~~~~~~~------~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~el 218 (364)
T 2j6i_A 147 N--HDWEVAAIAKD------AYDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEEL 218 (364)
T ss_dssp T--TCCCHHHHHTT------CCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHH
T ss_pred h--CCCCcCcccCC------cccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHH
Confidence 2 46642100000 01345566776 8888899999999985 32 4332 222334576654 78999
Q ss_pred cccCcEEEEcc----CCCCccCHhHHhcCCCCcEEEccCCCCccccccccc
Q psy4626 308 IRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLR 354 (542)
Q Consensus 308 ~~~~d~~~t~t----g~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~~~l~ 354 (542)
++++|||++++ .++++|+.+.|+.||+|++|+|+|++.. +|-++|.
T Consensus 219 l~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~-vd~~aL~ 268 (364)
T 2j6i_A 219 VAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAI-CVAEDVA 268 (364)
T ss_dssp HHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGG-BCHHHHH
T ss_pred HhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCch-hCHHHHH
Confidence 99999999943 5679999999999999999999999765 3444444
No 72
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=98.66 E-value=7.5e-08 Score=99.68 Aligned_cols=104 Identities=19% Similarity=0.200 Sum_probs=83.1
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCH------HHHh-cC
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKL------NEVI-RT 132 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l------~e~l-~~ 132 (542)
...|+++.++ ...+|++|+|+|.|.||+.+++.++.+|++|++++.++.+...+...|++ +++. .+.+ .+
T Consensus 166 ~ta~~~l~~~--~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~ 243 (360)
T 1piw_A 166 LTVYSPLVRN--GCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDT 243 (360)
T ss_dssp HHHHHHHHHT--TCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSC
T ss_pred HHHHHHHHHc--CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcC
Confidence 3446777664 34579999999999999999999999999999999999888777777865 3332 1222 47
Q ss_pred CcEEEEcCCC--cccCCHHHHhccCCCeEEEeccCCC
Q psy4626 133 VDIVVTATGN--KNVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 133 aDvVi~atG~--~~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
+|+||+++|. ...+. +.++.+++++.++.+|...
T Consensus 244 ~D~vid~~g~~~~~~~~-~~~~~l~~~G~iv~~g~~~ 279 (360)
T 1piw_A 244 FDLIVVCASSLTDIDFN-IMPKAMKVGGRIVSISIPE 279 (360)
T ss_dssp EEEEEECCSCSTTCCTT-TGGGGEEEEEEEEECCCCC
T ss_pred CCEEEECCCCCcHHHHH-HHHHHhcCCCEEEEecCCC
Confidence 9999999987 66665 6899999999999998754
No 73
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=98.66 E-value=9.9e-08 Score=99.47 Aligned_cols=120 Identities=15% Similarity=0.145 Sum_probs=88.4
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCH------HHHhcCC
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKL------NEVIRTV 133 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l------~e~l~~a 133 (542)
...|+++.+. ...+|++|+|+|.|.||+.+++.++.+|++|++++.++.+...+...|++ +++. +++..++
T Consensus 181 ~tA~~al~~~--~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~ 258 (369)
T 1uuf_A 181 ITTYSPLRHW--QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSF 258 (369)
T ss_dssp HHHHHHHHHT--TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCE
T ss_pred HHHHHHHHhc--CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCC
Confidence 3446676664 24579999999999999999999999999999999999888877777875 3322 1223578
Q ss_pred cEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCc---ccChHhhcCCCccee
Q psy4626 134 DIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNT---EIDVNSLRTPDLTWE 183 (542)
Q Consensus 134 DvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~---eid~~aL~~~~l~v~ 183 (542)
|++|+++|....+ .+.++.+++++.++.+|.... .++...+..+++++.
T Consensus 259 Dvvid~~g~~~~~-~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~ 310 (369)
T 1uuf_A 259 DFILNTVAAPHNL-DDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIA 310 (369)
T ss_dssp EEEEECCSSCCCH-HHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEE
T ss_pred CEEEECCCCHHHH-HHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEE
Confidence 9999999976666 378999999999999987642 344444444444433
No 74
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.66 E-value=5.2e-08 Score=87.77 Aligned_cols=88 Identities=17% Similarity=0.276 Sum_probs=71.2
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhh-hhcCCcee---eCHHHHhcCCcEEEEcCCCccc-CCHHH
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQ-ACMDGFSV---VKLNEVIRTVDIVVTATGNKNV-VTREH 150 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~-A~~~G~~v---~~l~e~l~~aDvVi~atG~~~l-I~~e~ 150 (542)
.|++|+|+|+|.+|+.+++.|+..|++|+++++++.+... +...|..+ .++++++.++|+||+|++..+. +.
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~~~~~--- 96 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKTPIVE--- 96 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSSCSBC---
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCCcEee---
Confidence 4999999999999999999999999999999999987653 44445442 3567788999999999986543 43
Q ss_pred HhccCCCeEEEeccCC
Q psy4626 151 MDKMKNGCVVCNMGHS 166 (542)
Q Consensus 151 l~~mk~GailvnvG~g 166 (542)
.+.+++|+.++++|..
T Consensus 97 ~~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 97 ERSLMPGKLFIDLGNP 112 (144)
T ss_dssp GGGCCTTCEEEECCSS
T ss_pred HHHcCCCCEEEEccCC
Confidence 2668899999999864
No 75
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=98.65 E-value=1.8e-08 Score=105.02 Aligned_cols=120 Identities=21% Similarity=0.205 Sum_probs=92.3
Q ss_pred HHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCce-eeC-----HHHHh-c---
Q psy4626 63 IIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFS-VVK-----LNEVI-R--- 131 (542)
Q Consensus 63 ~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~-v~~-----l~e~l-~--- 131 (542)
.++++.++ ...+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...+...|++ +++ ..+.+ +
T Consensus 171 a~~~l~~~--~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~ 248 (370)
T 4ej6_A 171 CLHGVDLS--GIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVG 248 (370)
T ss_dssp HHHHHHHH--TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTS
T ss_pred HHHHHHhc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhh
Confidence 45666544 24579999999999999999999999999 999999999988888888875 333 22222 2
Q ss_pred ----CCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC----cccChHhhcCCCcceeee
Q psy4626 132 ----TVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN----TEIDVNSLRTPDLTWEKV 185 (542)
Q Consensus 132 ----~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~----~eid~~aL~~~~l~v~~~ 185 (542)
++|+||+++|....+. +.++.+++++.++.+|... .+++...+..+++++.+.
T Consensus 249 ~~~gg~Dvvid~~G~~~~~~-~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 309 (370)
T 4ej6_A 249 LVPGGVDVVIECAGVAETVK-QSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGS 309 (370)
T ss_dssp SSTTCEEEEEECSCCHHHHH-HHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEEC
T ss_pred ccCCCCCEEEECCCCHHHHH-HHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEe
Confidence 5899999999766664 7899999999999998653 356666665566666554
No 76
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.65 E-value=8.9e-08 Score=97.11 Aligned_cols=225 Identities=14% Similarity=0.190 Sum_probs=138.0
Q ss_pred ccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee-CHHHHhcCCcEEEEc---C--------
Q psy4626 73 VMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV-KLNEVIRTVDIVVTA---T-------- 140 (542)
Q Consensus 73 ~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~-~l~e~l~~aDvVi~a---t-------- 140 (542)
.++.|.+++|+|........++.|...|.+|.+...+.. +....|.... ++.+.++++|+++.. .
T Consensus 3 ~~~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~---~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s 79 (300)
T 2rir_A 3 AMLTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQL---DHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVST 79 (300)
T ss_dssp CCCCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTS---SCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECB
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEecccc---ccccccceeccchHHHHhcCCEEEeccccccCCccccc
Confidence 346788999999999999999999999999987742211 1112343332 345667899999861 1
Q ss_pred ---CCcccCCHHHHhccCCCeEEEeccCCCcccC-hHhhcCCCcceeeeccceeeEecCCCCEEEEecCCCcccccCCCC
Q psy4626 141 ---GNKNVVTREHMDKMKNGCVVCNMGHSNTEID-VNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLSCSSL 216 (542)
Q Consensus 141 ---G~~~lI~~e~l~~mk~GailvnvG~g~~eid-~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLvnl~~~th 216 (542)
+.+..++++.++.++++..++ +|. +.+| ++++.++++.+..... ...+ .+
T Consensus 80 ~~a~~~~~~~~~~l~~~~~l~~i~-~g~--~~~d~~~~~~~~gi~v~~~~~---------~~~v---------~~----- 133 (300)
T 2rir_A 80 VFSNEEVVLKQDHLDRTPAHCVIF-SGI--SNAYLENIAAQAKRKLVKLFE---------RDDI---------AI----- 133 (300)
T ss_dssp SSCSSCEECCHHHHHTSCTTCEEE-ESS--CCHHHHHHHHHTTCCEEEGGG---------SHHH---------HH-----
T ss_pred ccccCCccchHHHHhhcCCCCEEE-Eec--CCHHHHHHHHHCCCEEEeecC---------CCce---------EE-----
Confidence 233337788899999998887 554 4566 6677655554433211 0000 00
Q ss_pred hhHHHhhHHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHHHhhcCCC--CCCCC-
Q psy4626 217 PSFVVSITACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQAKYMGLN--KAGPF- 289 (542)
Q Consensus 217 p~~vmd~sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~a~~lg~~--e~~p~- 289 (542)
.. .++.+..... ...... .. ++..+++++ .+++...++++.+|+. ..||.
T Consensus 134 -~r--~~~~~~g~~~--~~~~~~----~~--------------~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 134 -YN--SIPTVEGTIM--LAIQHT----DY--------------TIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp -HH--HHHHHHHHHH--HHHHTC----SS--------------CSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred -Ec--CccHHHHHHH--HHHHhc----CC--------------CCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 00 0111110000 000100 00 112234444 7777788888888873 22332
Q ss_pred -CCCccccCCeee---eehhhhcccCcEEEEccCCCCccCHhHHhcCCCCcEEEccCCCCccccc
Q psy4626 290 -KPSYYSMDGFSV---VKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDV 350 (542)
Q Consensus 290 -~a~ea~mdG~~v---~~~~~a~~~~d~~~t~tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~ 350 (542)
+..++.-.|+++ .+++++++.+|+||+++.. ++|+.+.|+.||+|++++|+++...++++
T Consensus 191 ~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-~~i~~~~~~~mk~g~~lin~a~g~~~~~~ 254 (300)
T 2rir_A 191 AHLARITEMGLVPFHTDELKEHVKDIDICINTIPS-MILNQTVLSSMTPKTLILDLASRPGGTDF 254 (300)
T ss_dssp HHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-CCBCHHHHTTSCTTCEEEECSSTTCSBCH
T ss_pred HHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-hhhCHHHHHhCCCCCEEEEEeCCCCCcCH
Confidence 221111236654 3578899999999999997 78999999999999999999998877664
No 77
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=98.65 E-value=3.5e-08 Score=102.05 Aligned_cols=120 Identities=17% Similarity=0.289 Sum_probs=90.1
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCce-eeCH-----HH---Hh-
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFS-VVKL-----NE---VI- 130 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~-v~~l-----~e---~l- 130 (542)
..++++.++ ...+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...+...|++ +++. ++ .+
T Consensus 159 ta~~al~~~--~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 159 VGIHACRRG--GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE 236 (356)
T ss_dssp HHHHHHHHH--TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHH
T ss_pred HHHHHHHhc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHH
Confidence 346666544 24579999999999999999999999999 999999999988878888874 3221 11 11
Q ss_pred ----cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC--cccChHhhcCCCcceee
Q psy4626 131 ----RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN--TEIDVNSLRTPDLTWEK 184 (542)
Q Consensus 131 ----~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~--~eid~~aL~~~~l~v~~ 184 (542)
.++|+||+++|....+ .+.++.+++++.++.+|... ..++...+..+++++.+
T Consensus 237 ~~~~~g~D~vid~~g~~~~~-~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g 295 (356)
T 1pl8_A 237 GQLGCKPEVTIECTGAEASI-QAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKG 295 (356)
T ss_dssp HHHTSCCSEEEECSCCHHHH-HHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEE
T ss_pred HHhCCCCCEEEECCCChHHH-HHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEE
Confidence 3699999999986566 37899999999999998653 34555555545555444
No 78
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.63 E-value=5.6e-08 Score=101.37 Aligned_cols=198 Identities=14% Similarity=0.246 Sum_probs=122.4
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC----cccChHhhcCCCcceeeeccceeeEecCCCCEEEEe
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN----TEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLL 203 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~----~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LL 203 (542)
+.++++|+++.... ..-++++.++.+++-..+...|.|- +.+|++++.++++.+.....
T Consensus 44 ~~~~~ad~li~~~~-~~~~~~~~l~~~~~Lk~I~~~g~G~~~~~d~id~~~a~~~gI~V~n~pg---------------- 106 (352)
T 3gg9_A 44 ARVADVEALVLIRE-RTRVTRQLLDRLPKLKIISQTGRVSRDAGGHIDLEACTDKGVVVLEGKG---------------- 106 (352)
T ss_dssp HHTTTCSEEEECTT-SSCBCHHHHTTCTTCCEEEESSCCCCSSSCSBCHHHHHHHTCEEECCCC----------------
T ss_pred HHhcCCeEEEEeCC-CCCCCHHHHhhCCCCeEEEEeCcccCCccCcccHHHHHhCCeEEEECCC----------------
Confidence 34689999987322 2246788999998888888889887 88999887755444432210
Q ss_pred cCCCcccccCCCChhHHH--hhHHHHHHHHHHHHhcCCCCCCCCccc---cCChhhHHHHHHhcCCcccc----cccccc
Q psy4626 204 AEGRLVNLSCSSLPSFVV--SITACTQALALIELFNAPSGRYKSDVY---LLPKKMDEYVASLHLPTFDA----HLTELS 274 (542)
Q Consensus 204 a~GrLvnl~~~thp~~vm--d~sfa~q~la~~~L~~~~~~~~~~gv~---~lp~~~d~~VA~l~L~~lg~----~i~~lt 274 (542)
. .. + ....++ -++++.++.......+. ++|...-. ..|... ..-.++..+++|+ .|++..
T Consensus 107 ---~-~~---~-vAE~al~l~L~~~R~~~~~~~~~~~--g~W~~~~~~~~~~~~~~-~~~~~l~g~tvGIIGlG~IG~~v 175 (352)
T 3gg9_A 107 ---S-PV---A-PAELTWALVMAAQRRIPQYVASLKH--GAWQQSGLKSTTMPPNF-GIGRVLKGQTLGIFGYGKIGQLV 175 (352)
T ss_dssp ---C-SH---H-HHHHHHHHHHHHHTTHHHHHHHHHT--TCTTCCCCCCTTSCTTT-TSBCCCTTCEEEEECCSHHHHHH
T ss_pred ---C-cH---H-HHHHHHHHHHHHHhhHHHHHHHHHc--CCCCccccccccccccc-ccCccCCCCEEEEEeECHHHHHH
Confidence 0 00 0 000000 11222222111122222 46654210 000000 0001345566766 888889
Q ss_pred HHHHhhcCCCC--CCCCCC-CccccCCeeee-ehhhhcccCcEEEE----ccCCCCccCHhHHhcCCCCcEEEccCCCCc
Q psy4626 275 DEQAKYMGLNK--AGPFKP-SYYSMDGFSVV-KLNEVIRTVDIVVT----ATGNKNVVTREHMDKMKNGCVVCNMGHSNT 346 (542)
Q Consensus 275 ~~~a~~lg~~e--~~p~~a-~ea~mdG~~v~-~~~~a~~~~d~~~t----~tg~~~vi~~~~~~~mk~gail~n~gh~~~ 346 (542)
+++++++|+.. .||... .++.-.|++.. +++|+++++|+|++ +..++++|+.+.|+.||+|++++|+|++..
T Consensus 176 A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~ 255 (352)
T 3gg9_A 176 AGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAEL 255 (352)
T ss_dssp HHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGG
T ss_pred HHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchh
Confidence 99999999843 244432 23445788877 89999999999999 345789999999999999999999999887
Q ss_pred cccccccc
Q psy4626 347 EIDVNSLR 354 (542)
Q Consensus 347 Ei~~~~l~ 354 (542)
+|-++|.
T Consensus 256 -vd~~aL~ 262 (352)
T 3gg9_A 256 -VEENGMV 262 (352)
T ss_dssp -BCTTHHH
T ss_pred -hcHHHHH
Confidence 3544444
No 79
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.63 E-value=1.2e-07 Score=100.52 Aligned_cols=178 Identities=11% Similarity=0.089 Sum_probs=117.2
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.++++|+++..+.+ .++++.|+.+++-..+...|.|-+.+|+++..++++.+.....
T Consensus 43 ~~~~~~d~l~~~~~~--~~~~~~l~~~~~Lk~I~~~~~G~d~iD~~~a~~~GI~V~n~p~-------------------- 100 (404)
T 1sc6_A 43 ESIRDAHFIGLRSRT--HLTEDVINAAEKLVAIGAFAIGTNQVDLDAAAKRGIPVFNAPF-------------------- 100 (404)
T ss_dssp HHTTSCSEEEECSSC--CBCHHHHHHCSSCCEEEECSSCCTTBCHHHHHHTTCCEECCTT--------------------
T ss_pred HHhcCCeEEEEcCCC--CCCHHHHhhCCCCcEEEECCcccCccCHHHHHhCCCEEEecCc--------------------
Confidence 456889998765433 4778889999888889899999889999988766554443210
Q ss_pred cccccCCCChhHHHhhHH------HHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHH
Q psy4626 208 LVNLSCSSLPSFVVSITA------CTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQ 277 (542)
Q Consensus 208 Lvnl~~~thp~~vmd~sf------a~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~ 277 (542)
.++..+-...+ +.++.......++ ++|...-+. . -++..+++|+ .|++..+++
T Consensus 101 -------~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~--g~W~~~~~~-~-------~el~gktlGiIGlG~IG~~vA~~ 163 (404)
T 1sc6_A 101 -------SNTRSVAELVIGELLLLLRGVPEANAKAHR--GVGNKLAAG-S-------FEARGKKLGIIGYGHIGTQLGIL 163 (404)
T ss_dssp -------TTHHHHHHHHHHHHHHHHHTHHHHHHHHHH--TCCC------C-------CCSTTCEEEEECCSHHHHHHHHH
T ss_pred -------ccHHHHHHHHHHHHHHHHhChHHHHHHHHc--CCccccCCC-c-------cccCCCEEEEEeECHHHHHHHHH
Confidence 01111111122 2211111111222 567542110 0 1355667777 899999999
Q ss_pred HhhcCCC--CCCCCCCCccccCCeee-eehhhhcccCcEEEE----ccCCCCccCHhHHhcCCCCcEEEccCCCCc
Q psy4626 278 AKYMGLN--KAGPFKPSYYSMDGFSV-VKLNEVIRTVDIVVT----ATGNKNVVTREHMDKMKNGCVVCNMGHSNT 346 (542)
Q Consensus 278 a~~lg~~--e~~p~~a~ea~mdG~~v-~~~~~a~~~~d~~~t----~tg~~~vi~~~~~~~mk~gail~n~gh~~~ 346 (542)
++++|+. -.||.+..+ ..|.+. .+++|+++++|+|++ +..++++|+.+.|+.||+|++++|++++..
T Consensus 164 l~~~G~~V~~~d~~~~~~--~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~ 237 (404)
T 1sc6_A 164 AESLGMYVYFYDIENKLP--LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTV 237 (404)
T ss_dssp HHHTTCEEEEECSSCCCC--CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSS
T ss_pred HHHCCCEEEEEcCCchhc--cCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChH
Confidence 9999984 335544332 234444 489999999999999 447889999999999999999999999876
No 80
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=98.63 E-value=6.1e-08 Score=99.95 Aligned_cols=121 Identities=15% Similarity=0.233 Sum_probs=90.8
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCH-------HHH---h
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKL-------NEV---I 130 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l-------~e~---l 130 (542)
..|+++.++ ...+|++|+|+|.|.+|+.+++.++.+|++|++++.++.+...+...|++ +++. +++ .
T Consensus 156 ta~~al~~~--~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~ 233 (352)
T 1e3j_A 156 VGVHACRRA--GVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERI 233 (352)
T ss_dssp HHHHHHHHH--TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHH
T ss_pred HHHHHHHhc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHh
Confidence 346666544 24579999999999999999999999999999999999888877777864 2221 111 2
Q ss_pred -----cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC--cccChHhhcCCCcceeee
Q psy4626 131 -----RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN--TEIDVNSLRTPDLTWEKV 185 (542)
Q Consensus 131 -----~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~--~eid~~aL~~~~l~v~~~ 185 (542)
.++|++|+++|....+ .+.++.+++++.++.+|... ..++...+..+++++.+.
T Consensus 234 ~~~~g~g~D~vid~~g~~~~~-~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~ 294 (352)
T 1e3j_A 234 RSAIGDLPNVTIDCSGNEKCI-TIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSV 294 (352)
T ss_dssp HHHSSSCCSEEEECSCCHHHH-HHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEEC
T ss_pred ccccCCCCCEEEECCCCHHHH-HHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEe
Confidence 2699999999986556 37899999999999998753 345555565555555543
No 81
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.62 E-value=4.3e-08 Score=101.16 Aligned_cols=182 Identities=15% Similarity=0.174 Sum_probs=115.2
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.++++|+++... .+ .++.++.+++-..|...|.|-+.+|.+++.. .+.+....
T Consensus 43 ~~~~~ad~li~~~---~~-~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~-gI~v~n~~--------------------- 96 (324)
T 3hg7_A 43 KLIGEAHILMAEP---AR-AKPLLAKANKLSWFQSTYAGVDVLLDARCRR-DYQLTNVR--------------------- 96 (324)
T ss_dssp HHGGGCSEEEECH---HH-HGGGGGGCTTCCEEEESSSCCGGGSCTTSCC-SSEEECCC---------------------
T ss_pred HHhCCCEEEEECC---CC-CHHHHhhCCCceEEEECCCCCCccChHHHhC-CEEEEECC---------------------
Confidence 4578999998632 23 3467888888889999999877777766543 23222211
Q ss_pred cccccCCCChhHHHhh------HHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHH
Q psy4626 208 LVNLSCSSLPSFVVSI------TACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQ 277 (542)
Q Consensus 208 Lvnl~~~thp~~vmd~------sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~ 277 (542)
. .+...+-+. +++.++.......+. ++|.+.... ++..+++|+ .|++..+++
T Consensus 97 -----g-~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~--g~W~~~~~~----------~l~g~tvGIIGlG~IG~~vA~~ 158 (324)
T 3hg7_A 97 -----G-IFGPLMSEYVFGHLLSLMRQLPLYREQQKQ--RLWQSHPYQ----------GLKGRTLLILGTGSIGQHIAHT 158 (324)
T ss_dssp -----S-CCHHHHHHHHHHHHHHHHTTHHHHHHHHHT--TCCCCCCCC----------CSTTCEEEEECCSHHHHHHHHH
T ss_pred -----C-cChHHHHHHHHHHHHHHHhChHHHHHHHhh--CCCcCCCCc----------ccccceEEEEEECHHHHHHHHH
Confidence 0 011111111 112221111122222 567653211 455567776 899999999
Q ss_pred HhhcCCCC--CCCC-CCCccccCCeeeeehhhhcccCcEEEE----ccCCCCccCHhHHhcCCCCcEEEccCCCCccccc
Q psy4626 278 AKYMGLNK--AGPF-KPSYYSMDGFSVVKLNEVIRTVDIVVT----ATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDV 350 (542)
Q Consensus 278 a~~lg~~e--~~p~-~a~ea~mdG~~v~~~~~a~~~~d~~~t----~tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~ 350 (542)
++++|+.. .||. +..+..-.++...+++|+++++|||++ +..++++|+.+.|+.||+|++++|+|++.. +|-
T Consensus 159 l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~-vde 237 (324)
T 3hg7_A 159 GKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNA-INE 237 (324)
T ss_dssp HHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGG-BCH
T ss_pred HHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchh-hCH
Confidence 99999842 2332 233332334555689999999999999 356789999999999999999999999987 344
Q ss_pred cccc
Q psy4626 351 NSLR 354 (542)
Q Consensus 351 ~~l~ 354 (542)
++|.
T Consensus 238 ~aL~ 241 (324)
T 3hg7_A 238 GDLL 241 (324)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4343
No 82
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.62 E-value=2.3e-08 Score=104.78 Aligned_cols=186 Identities=12% Similarity=0.177 Sum_probs=116.5
Q ss_pred HhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEec-cCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 129 VIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNM-GHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 129 ~l~~aDvVi~atG~~~lI~~e~l~~mk~Gailvnv-G~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
.+.++|+++.. .-++++.++.+++-..+..+ |.|-+.+|++++.++++.+.....
T Consensus 73 ~~~~~~~i~~~----~~i~~~~l~~~p~Lk~I~~~~~~G~d~iD~~~a~~~GI~V~n~~~-------------------- 128 (365)
T 4hy3_A 73 ILGRARYIIGQ----PPLSAETLARMPALRSILNVESNLLNNMPYEVLFQRGIHVVTTGQ-------------------- 128 (365)
T ss_dssp HHHHEEEEEEC----CCCCHHHHTTCTTCCEEECCSSSCCSCSCTTHHHHSCCEEEECGG--------------------
T ss_pred hhCCeEEEEeC----CCCCHHHHhhCCCCeEEEEecccccCcccHHHHhcCCeEEEeCCC--------------------
Confidence 44567887732 24678899999888777765 566667888888765554432211
Q ss_pred cccccCCCChhHHHhhHHHH------HHHHHHHHhcCCCCC--CCCccccCChhhHHHHHHhcCCcccc----ccccccH
Q psy4626 208 LVNLSCSSLPSFVVSITACT------QALALIELFNAPSGR--YKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSD 275 (542)
Q Consensus 208 Lvnl~~~thp~~vmd~sfa~------q~la~~~L~~~~~~~--~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~ 275 (542)
. +...+-+..++. ++.......+. ++ |...-...+ .++..+++|+ .|++..+
T Consensus 129 -~------~~~~vAE~~l~l~L~~~R~~~~~~~~~r~--g~~~w~~~~~~~~-------~~l~gktvGIIGlG~IG~~vA 192 (365)
T 4hy3_A 129 -V------FAEPVAEIGLGFALALARGIVDADIAFQE--GTELWGGEGNASA-------RLIAGSEIGIVGFGDLGKALR 192 (365)
T ss_dssp -G------GHHHHHHHHHHHHHHHHHTTTHHHHHHHH--TCCCCSSSSTTSC-------CCSSSSEEEEECCSHHHHHHH
T ss_pred -c------cchHHHHHHHHHHHHHHhchhHHHHHHHc--CCccccccccccc-------cccCCCEEEEecCCcccHHHH
Confidence 0 111111122221 11111111111 23 432110001 1345567777 8999999
Q ss_pred HHHhhcCCC--CCCCCCCC-ccccCCeeeeehhhhcccCcEEEE----ccCCCCccCHhHHhcCCCCcEEEccCCCCccc
Q psy4626 276 EQAKYMGLN--KAGPFKPS-YYSMDGFSVVKLNEVIRTVDIVVT----ATGNKNVVTREHMDKMKNGCVVCNMGHSNTEI 348 (542)
Q Consensus 276 ~~a~~lg~~--e~~p~~a~-ea~mdG~~v~~~~~a~~~~d~~~t----~tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei 348 (542)
++++++|+. -.||.... .+...|++..+++|+++++|||++ +..++++|+.+.|+.||+|++|+|+|++++ +
T Consensus 193 ~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~-v 271 (365)
T 4hy3_A 193 RVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADV-V 271 (365)
T ss_dssp HHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGG-S
T ss_pred HhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCch-h
Confidence 999999994 23555433 234578888899999999999998 456899999999999999999999999988 6
Q ss_pred ccccccC
Q psy4626 349 DVNSLRT 355 (542)
Q Consensus 349 ~~~~l~~ 355 (542)
|-++|.+
T Consensus 272 de~aL~~ 278 (365)
T 4hy3_A 272 DFDALMA 278 (365)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 7666654
No 83
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.60 E-value=2.6e-07 Score=93.40 Aligned_cols=91 Identities=24% Similarity=0.348 Sum_probs=75.2
Q ss_pred HHHHHHHHHHhhcCccccCcEEEEEcCCh-hHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEE
Q psy4626 59 CRESIIDSLKRSTDVMFGGKQVVLCGYGE-VGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVV 137 (542)
Q Consensus 59 ~~~s~~~ai~r~~~~~l~GktVvViG~G~-IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi 137 (542)
+-.+++..+.+ .+..+.|++++|+|.|. +|+.+|+.|...|++|++++.. ..++++.++.||+||
T Consensus 144 Tp~gv~~lL~~-~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~-------------t~~L~~~~~~ADIVI 209 (285)
T 3l07_A 144 TPKGIMTMLRE-YGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF-------------TTDLKSHTTKADILI 209 (285)
T ss_dssp HHHHHHHHHHH-TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT-------------CSSHHHHHTTCSEEE
T ss_pred CHHHHHHHHHH-hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC-------------chhHHHhcccCCEEE
Confidence 34566665444 45789999999999987 7999999999999999999742 236778899999999
Q ss_pred EcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 138 TATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 138 ~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
.++|.+++|+++ .+|+|++++++|..
T Consensus 210 ~Avg~p~~I~~~---~vk~GavVIDvgi~ 235 (285)
T 3l07_A 210 VAVGKPNFITAD---MVKEGAVVIDVGIN 235 (285)
T ss_dssp ECCCCTTCBCGG---GSCTTCEEEECCCE
T ss_pred ECCCCCCCCCHH---HcCCCcEEEEeccc
Confidence 999999999864 46999999999964
No 84
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=98.59 E-value=1.6e-07 Score=96.78 Aligned_cols=122 Identities=18% Similarity=0.186 Sum_probs=91.0
Q ss_pred HHHHHHHHhhcCcc-----ccCcEEEEE-cCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeC----HHHH
Q psy4626 61 ESIIDSLKRSTDVM-----FGGKQVVLC-GYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVK----LNEV 129 (542)
Q Consensus 61 ~s~~~ai~r~~~~~-----l~GktVvVi-G~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~----l~e~ 129 (542)
-..|+++.+..+.. .+|++|+|+ |.|.||+.+++.++.+|++|++++.++.+...+...|++ +++ ..+.
T Consensus 130 ~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~ 209 (346)
T 3fbg_A 130 ITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQ 209 (346)
T ss_dssp HHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHH
T ss_pred HHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHH
Confidence 34566665433322 179999999 799999999999999999999999999888877777875 332 2222
Q ss_pred h-----cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCccee
Q psy4626 130 I-----RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWE 183 (542)
Q Consensus 130 l-----~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~ 183 (542)
+ .+.|++++|+|....+. ..++.+++++.++.+|.....+++..+..++++..
T Consensus 210 ~~~~~~~g~Dvv~d~~g~~~~~~-~~~~~l~~~G~iv~~~~~~~~~~~~~~~~~~~~~~ 267 (346)
T 3fbg_A 210 FKTQGIELVDYVFCTFNTDMYYD-DMIQLVKPRGHIATIVAFENDQDLNALKPKSLSFS 267 (346)
T ss_dssp HHHHTCCCEEEEEESSCHHHHHH-HHHHHEEEEEEEEESSCCSSCBCGGGGTTTTCEEE
T ss_pred HHHhCCCCccEEEECCCchHHHH-HHHHHhccCCEEEEECCCCCCCccccccccceEEE
Confidence 2 36899999999766664 68899999999999886666677666655554443
No 85
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=98.59 E-value=1.1e-07 Score=98.41 Aligned_cols=105 Identities=17% Similarity=0.135 Sum_probs=82.2
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh-cCCce-eeCH---H---HHhcC
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQAC-MDGFS-VVKL---N---EVIRT 132 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~-~~G~~-v~~l---~---e~l~~ 132 (542)
...|+++.+. +...+|++|+|+|+|+||+.+++.++.+|++|++++.++.+...+. ..|++ +++. + ++..+
T Consensus 166 ~ta~~~l~~~-~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g 244 (357)
T 2cf5_A 166 VTVYSPLSHF-GLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADS 244 (357)
T ss_dssp HHHHHHHHHT-STTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTT
T ss_pred HHHHHHHHhc-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCC
Confidence 3456676654 2222899999999999999999999999999999999988877666 77875 3322 1 22357
Q ss_pred CcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC
Q psy4626 133 VDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 133 aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
+|++|+++|....+. +.++.+++++.++.+|...
T Consensus 245 ~D~vid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~ 278 (357)
T 2cf5_A 245 LDYVIDTVPVHHALE-PYLSLLKLDGKLILMGVIN 278 (357)
T ss_dssp EEEEEECCCSCCCSH-HHHTTEEEEEEEEECSCCS
T ss_pred CCEEEECCCChHHHH-HHHHHhccCCEEEEeCCCC
Confidence 899999999766664 7899999999999999754
No 86
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=98.59 E-value=1.5e-07 Score=96.56 Aligned_cols=120 Identities=16% Similarity=0.161 Sum_probs=91.0
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeC-----HHHHh----
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVK-----LNEVI---- 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~-----l~e~l---- 130 (542)
...|+++.+. ...+|++|+|+|.|.+|..+++.++.+|++|++++.++.+...+...|++ +++ ..+.+
T Consensus 153 ~ta~~~l~~~--~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~ 230 (340)
T 3s2e_A 153 VTVYKGLKVT--DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEI 230 (340)
T ss_dssp HHHHHHHHTT--TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHH
T ss_pred HHHHHHHHHc--CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhC
Confidence 4457777554 34689999999999999999999999999999999999998888888875 332 22222
Q ss_pred cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC--cccChHhhcCCCccee
Q psy4626 131 RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN--TEIDVNSLRTPDLTWE 183 (542)
Q Consensus 131 ~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~--~eid~~aL~~~~l~v~ 183 (542)
.++|++++++|....+. ..++.+++++.++.+|... ..++...+..+++++.
T Consensus 231 g~~d~vid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~ 284 (340)
T 3s2e_A 231 GGAHGVLVTAVSPKAFS-QAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIR 284 (340)
T ss_dssp SSEEEEEESSCCHHHHH-HHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEE
T ss_pred CCCCEEEEeCCCHHHHH-HHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEE
Confidence 37899999998777774 7899999999999998764 3344444433444443
No 87
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.58 E-value=2.1e-07 Score=93.64 Aligned_cols=89 Identities=20% Similarity=0.334 Sum_probs=74.2
Q ss_pred HHHHHHHHHHhhcCccccCcEEEEEcCCh-hHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEE
Q psy4626 59 CRESIIDSLKRSTDVMFGGKQVVLCGYGE-VGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVV 137 (542)
Q Consensus 59 ~~~s~~~ai~r~~~~~l~GktVvViG~G~-IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi 137 (542)
|-.+++..+.+. + +.|++++|+|.|. +|+.+|+.|...|++|++++.. ..++++.++.||+||
T Consensus 135 Tp~gv~~lL~~~-~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~-------------t~~L~~~~~~ADIVI 198 (276)
T 3ngx_A 135 TPRAVIDIMDYY-G--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK-------------TKDIGSMTRSSKIVV 198 (276)
T ss_dssp HHHHHHHHHHHH-T--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT-------------CSCHHHHHHHSSEEE
T ss_pred cHHHHHHHHHHh-C--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC-------------cccHHHhhccCCEEE
Confidence 345666666554 3 8999999999985 8999999999999999999742 246778889999999
Q ss_pred EcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 138 TATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 138 ~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
.++|.+++++++. +|+|++++++|..
T Consensus 199 ~Avg~p~~I~~~~---vk~GavVIDvgi~ 224 (276)
T 3ngx_A 199 VAVGRPGFLNREM---VTPGSVVIDVGIN 224 (276)
T ss_dssp ECSSCTTCBCGGG---CCTTCEEEECCCE
T ss_pred ECCCCCccccHhh---ccCCcEEEEeccC
Confidence 9999999998644 6999999999964
No 88
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.58 E-value=4.1e-07 Score=91.96 Aligned_cols=223 Identities=17% Similarity=0.194 Sum_probs=137.7
Q ss_pred ccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcC-C-----------
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTAT-G----------- 141 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~at-G----------- 141 (542)
+.|.+++|+|.-..-...++.|...|.+|.+...+... ....|... ..+.+.++++|+++... |
T Consensus 3 ~~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~~~~ 79 (293)
T 3d4o_A 3 LTGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLD---DGFIGVTKMRIDEVDWNTVDAILLPISGTNEAGKVDTIF 79 (293)
T ss_dssp CTTCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC-----CTTCEEECGGGCCGGGCSEEECCTTCCCTTCBCCBSS
T ss_pred ccCcEEEEECCCHHHHHHHHHHHhCCCEEEEecccccc---ccccccccccchHHHHhcCCEEEeccccccCCceeeccc
Confidence 56889999998888888899999999999886432110 11123322 23456678999998631 1
Q ss_pred --CcccCCHHHHhccCCCeEEEeccCCCcccCh-HhhcCCCcceeeeccceeeEecCCCCEEEEecCCCcccccCCCChh
Q psy4626 142 --NKNVVTREHMDKMKNGCVVCNMGHSNTEIDV-NSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLSCSSLPS 218 (542)
Q Consensus 142 --~~~lI~~e~l~~mk~GailvnvG~g~~eid~-~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLvnl~~~thp~ 218 (542)
.+..++++.++.+++...+. +|. +.+|+ +++..+++.+.... +. .. .|.
T Consensus 80 ~~~~~~~~~~~l~~~~~l~~i~-~G~--d~id~~~~~~~~gi~v~~~~---------~~-----------~~-----~~~ 131 (293)
T 3d4o_A 80 SNESIVLTEEMIEKTPNHCVVY-SGI--SNTYLNQCMKKTNRTLVKLM---------ER-----------DD-----IAI 131 (293)
T ss_dssp CSCCCBCCHHHHHTSCTTCEEE-ESS--CCHHHHHHHHHHTCEEEEGG---------GC-----------HH-----HHH
T ss_pred ccCCccchHHHHHhCCCCCEEE-ecC--CCHHHHHHHHHcCCeEEEec---------CC-----------ce-----eee
Confidence 22246788999998887776 443 45665 55554333332210 00 00 001
Q ss_pred HHHhhHHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHHHhhcCCC--CCCCC--C
Q psy4626 219 FVVSITACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQAKYMGLN--KAGPF--K 290 (542)
Q Consensus 219 ~vmd~sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~a~~lg~~--e~~p~--~ 290 (542)
....+.|..+++.+--+.. .. +..+++++ .+++...++++.+|+. ..||. +
T Consensus 132 -~~~~svae~a~~~~l~~~~--~~------------------l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~ 190 (293)
T 3d4o_A 132 -YNSIPTAEGTIMMAIQHTD--FT------------------IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDL 190 (293)
T ss_dssp -HHHHHHHHHHHHHHHHHCS--SC------------------STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred -eccHhHHHHHHHHHHHhcC--CC------------------CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 1133555555543321110 01 12233333 7888888888888873 22332 2
Q ss_pred CCccccCCeeee---ehhhhcccCcEEEEccCCCCccCHhHHhcCCCCcEEEccCCCCccccc
Q psy4626 291 PSYYSMDGFSVV---KLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDV 350 (542)
Q Consensus 291 a~ea~mdG~~v~---~~~~a~~~~d~~~t~tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~ 350 (542)
.-++.-.|.++. .++++++.+|+|+.++.. ++|+.+.|+.||+|++++|+++...++++
T Consensus 191 ~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-~~i~~~~l~~mk~~~~lin~ar~~~~~~~ 252 (293)
T 3d4o_A 191 LARIAEMGMEPFHISKAAQELRDVDVCINTIPA-LVVTANVLAEMPSHTFVIDLASKPGGTDF 252 (293)
T ss_dssp HHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS-CCBCHHHHHHSCTTCEEEECSSTTCSBCH
T ss_pred HHHHHHCCCeecChhhHHHHhcCCCEEEECCCh-HHhCHHHHHhcCCCCEEEEecCCCCCCCH
Confidence 222222365543 567889999999999975 78999999999999999999998877765
No 89
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.58 E-value=1.7e-07 Score=95.94 Aligned_cols=187 Identities=16% Similarity=0.226 Sum_probs=118.6
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.++++|+++..... -++++.++.+++-..+...|.|-+.+|++++.++++.+....
T Consensus 40 ~~~~~~d~~i~~~~~--~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~--------------------- 96 (307)
T 1wwk_A 40 ELVKDVEAIIVRSKP--KVTRRVIESAPKLKVIARAGVGLDNIDVEAAKEKGIEVVNAP--------------------- 96 (307)
T ss_dssp HHSTTCSEEEESSCS--CBCHHHHTTCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCG---------------------
T ss_pred HHhcCCEEEEEcCCC--CCCHHHHhhCCCCeEEEECCccccccCHHHHHhCCcEEEECC---------------------
Confidence 446889999864322 367788999999889999999988899888765444333221
Q ss_pred cccccCCCChhHHHhh------HHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHH
Q psy4626 208 LVNLSCSSLPSFVVSI------TACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQ 277 (542)
Q Consensus 208 Lvnl~~~thp~~vmd~------sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~ 277 (542)
.. ++..+-+. +++.++.......+. ++|.+.-. .+. ++..+++|+ .|++..+++
T Consensus 97 -----g~-~~~~vAE~~~~~~L~~~R~~~~~~~~~~~--g~w~~~~~-~~~-------~l~g~~vgIiG~G~IG~~~A~~ 160 (307)
T 1wwk_A 97 -----AA-SSRSVAELAVGLMFSVARKIAFADRKMRE--GVWAKKEA-MGI-------ELEGKTIGIIGFGRIGYQVAKI 160 (307)
T ss_dssp -----GG-GHHHHHHHHHHHHHHHHTTHHHHHHHHTT--TCCCTTTC-CBC-------CCTTCEEEEECCSHHHHHHHHH
T ss_pred -----CC-ChHHHHHHHHHHHHHHHhCHHHHHHHHHc--CCCCccCc-CCc-------ccCCceEEEEccCHHHHHHHHH
Confidence 00 11111111 111111111122222 46753110 011 334456666 888888999
Q ss_pred HhhcCCC--CCCCCCC-CccccCCeeeeehhhhcccCcEEEEcc----CCCCccCHhHHhcCCCCcEEEccCCCCccccc
Q psy4626 278 AKYMGLN--KAGPFKP-SYYSMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGHSNTEIDV 350 (542)
Q Consensus 278 a~~lg~~--e~~p~~a-~ea~mdG~~v~~~~~a~~~~d~~~t~t----g~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~ 350 (542)
++.+|+. ..||... ..+.-.|++..+++++++++|+|++++ .++++|+.+.|+.||+|++++|+|++.. +|-
T Consensus 161 l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~-vd~ 239 (307)
T 1wwk_A 161 ANALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPV-VDT 239 (307)
T ss_dssp HHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGG-BCH
T ss_pred HHHCCCEEEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcc-cCH
Confidence 9999983 2233322 233446788778999999999999954 3789999999999999999999999765 443
Q ss_pred cccc
Q psy4626 351 NSLR 354 (542)
Q Consensus 351 ~~l~ 354 (542)
.+|.
T Consensus 240 ~aL~ 243 (307)
T 1wwk_A 240 NALV 243 (307)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4333
No 90
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.56 E-value=2.3e-07 Score=97.21 Aligned_cols=110 Identities=19% Similarity=0.300 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHhhcCc-cccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhh-hhcCCceeeCHHHHhc-C
Q psy4626 56 LYMCRESIIDSLKRSTDV-MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQ-ACMDGFSVVKLNEVIR-T 132 (542)
Q Consensus 56 ~~g~~~s~~~ai~r~~~~-~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~-A~~~G~~v~~l~e~l~-~ 132 (542)
.||.-..+.+.+++..+. .+.|++|+|+|+|++|+.+|+.|..+|++|+++|+++.+..+ +...|...++.++++. .
T Consensus 151 g~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll~~~ 230 (364)
T 1leh_A 151 AYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVT 230 (364)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCC
T ss_pred hhHHHHHHHHHHHhhccccCCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHhccC
Confidence 344444444444443233 689999999999999999999999999999999999887653 3333666777777764 8
Q ss_pred CcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC
Q psy4626 133 VDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 133 aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
+|+++.|. ..++|+.+.++.++ ..++++.+.++
T Consensus 231 ~DIvip~a-~~~~I~~~~~~~lg-~~iV~e~An~p 263 (364)
T 1leh_A 231 CDIFAPCA-LGAVLNDFTIPQLK-AKVIAGSADNQ 263 (364)
T ss_dssp CSEEEECS-CSCCBSTTHHHHCC-CSEECCSCSCC
T ss_pred CcEeeccc-hHHHhCHHHHHhCC-CcEEEeCCCCC
Confidence 99999875 56688877788883 45677777665
No 91
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.56 E-value=9.9e-08 Score=100.91 Aligned_cols=216 Identities=13% Similarity=0.111 Sum_probs=133.5
Q ss_pred HHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccCh
Q psy4626 93 CQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDV 172 (542)
Q Consensus 93 A~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~ 172 (542)
...++.+|.+|.++...+.. ...+.+.++++|+++.......-++++.++.+++-..|...|.|-+.+|+
T Consensus 60 ~~~l~~~g~~v~~~~~~~~~----------~~~l~~~l~~ad~li~~~~~~~~i~~~~l~~~p~Lk~I~~~g~G~d~iD~ 129 (393)
T 2nac_A 60 RKYLESNGHTLVVTSDKDGP----------DSVFERELVDADVVISQPFWPAYLTPERIAKAKNLKLALTAGIGSDHVDL 129 (393)
T ss_dssp HHHHHHTTCEEEEESCCSST----------TSHHHHHHTTCSEEEEBTTBCCCBCHHHHHHCTTCCEEEESSSCCTTBCH
T ss_pred HHHHHhCCCEEEEecCCCCC----------HHHHHHhccCCCEEEEcCccCCCCCHHHHhhCCCCcEEEEcCccccccCH
Confidence 35677788887764211100 01134557899999875322235778899999999899999999888999
Q ss_pred HhhcCCCcceeeeccceeeEecCCCCEEEEecCCCcccccCCCChhHHHh------hHHHHHHHHHHHHhcCCCCCCCCc
Q psy4626 173 NSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLSCSSLPSFVVS------ITACTQALALIELFNAPSGRYKSD 246 (542)
Q Consensus 173 ~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLvnl~~~thp~~vmd------~sfa~q~la~~~L~~~~~~~~~~g 246 (542)
++...+++.+..+.. . +...+-+ ++++.++.......+. ++|...
T Consensus 130 ~aa~~~gI~V~n~~g--------------------------~-~~~~VAE~al~liL~~~R~~~~~~~~~~~--g~W~~~ 180 (393)
T 2nac_A 130 QSAIDRNVTVAEVTY--------------------------C-NSISVAEHVVMMILSLVRNYLPSHEWARK--GGWNIA 180 (393)
T ss_dssp HHHHHTTCEEEECTT--------------------------T-THHHHHHHHHHHHHHHHTTHHHHHHHHHT--TCCCHH
T ss_pred HHHhcCCEEEEeCCC--------------------------c-ccHHHHHHHHHHHHHHHhccHHHHHHHHc--CCCCcc
Confidence 988765554443210 0 0111111 1222222112222222 467431
Q ss_pred cccCChhhHHHHHHhcCCcccc----ccccccHHHHhhcCCC--CCCCC--CCCccccCCeee-eehhhhcccCcEEEEc
Q psy4626 247 VYLLPKKMDEYVASLHLPTFDA----HLTELSDEQAKYMGLN--KAGPF--KPSYYSMDGFSV-VKLNEVIRTVDIVVTA 317 (542)
Q Consensus 247 v~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~a~~lg~~--e~~p~--~a~ea~mdG~~v-~~~~~a~~~~d~~~t~ 317 (542)
-...+ --++..+++|+ .|++..+++++.+|+. -.||. +.-.+...|.+. .+++++++++|||++.
T Consensus 181 ~~~~~------~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~ 254 (393)
T 2nac_A 181 DCVSH------AYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLN 254 (393)
T ss_dssp HHHTT------CCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEEC
T ss_pred ccccC------CccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEe
Confidence 00000 01345567776 8888899999999984 22443 222333457765 4789999999999994
Q ss_pred ----cCCCCccCHhHHhcCCCCcEEEccCCCCccccccccc
Q psy4626 318 ----TGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLR 354 (542)
Q Consensus 318 ----tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~~~l~ 354 (542)
..++++|+.+.|+.||+|++|+|+|++.. +|-++|.
T Consensus 255 ~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~-vde~aL~ 294 (393)
T 2nac_A 255 CPLHPETEHMINDETLKLFKRGAYIVNTARGKL-CDRDAVA 294 (393)
T ss_dssp SCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGG-BCHHHHH
T ss_pred cCCchHHHHHhhHHHHhhCCCCCEEEECCCchH-hhHHHHH
Confidence 46789999999999999999999999865 3433444
No 92
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=98.56 E-value=1.4e-07 Score=96.91 Aligned_cols=118 Identities=12% Similarity=0.124 Sum_probs=88.1
Q ss_pred HHHHHHHHhh----cCccccCcEEEEEcCChhHHHHHHHHHhC--CCEEEEEeCCchhhhhhhcCCce-eeCHHH-----
Q psy4626 61 ESIIDSLKRS----TDVMFGGKQVVLCGYGEVGKGCCQSLKGL--GCVIYITEIDPICALQACMDGFS-VVKLNE----- 128 (542)
Q Consensus 61 ~s~~~ai~r~----~~~~l~GktVvViG~G~IG~~vA~~l~~~--Ga~Viv~d~dp~r~~~A~~~G~~-v~~l~e----- 128 (542)
...|+++.+. .+ . +|++|+|+|.|.||+.+++.++.+ |++|++++.++.+...+...|++ +++..+
T Consensus 153 ~ta~~al~~~~~~~~~-~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~ 230 (344)
T 2h6e_A 153 TTSMGAIRQALPFISK-F-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLI 230 (344)
T ss_dssp HHHHHHHHHHHHHHTT-C-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHH
T ss_pred HHHHHHHHhhhhcccC-C-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHH
Confidence 3456676654 13 3 899999999999999999999999 99999999999888777777875 444322
Q ss_pred -Hhc---CCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC--cccChHhhcCCCcc
Q psy4626 129 -VIR---TVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN--TEIDVNSLRTPDLT 181 (542)
Q Consensus 129 -~l~---~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~--~eid~~aL~~~~l~ 181 (542)
.+. ++|+||+++|....+ .+.++.+++++.++.+|... .+++...+..++++
T Consensus 231 ~~~~~g~g~D~vid~~g~~~~~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 288 (344)
T 2h6e_A 231 NKLTDGLGASIAIDLVGTEETT-YNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKK 288 (344)
T ss_dssp HHHHTTCCEEEEEESSCCHHHH-HHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCE
T ss_pred HHhhcCCCccEEEECCCChHHH-HHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcE
Confidence 122 689999999986566 47899999999999998653 23444444333333
No 93
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=98.56 E-value=1.7e-07 Score=96.18 Aligned_cols=119 Identities=18% Similarity=0.169 Sum_probs=88.6
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCH-----HHHh----
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKL-----NEVI---- 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l-----~e~l---- 130 (542)
...|+++.+. ...+|++|+|+|.|.||+.+++.++.+|++|+++++++.+...+...|++ +++. .+.+
T Consensus 151 ~ta~~~l~~~--~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 151 VTTYKALKVT--GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKV 228 (339)
T ss_dssp HHHHHHHHHH--TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHH
T ss_pred HHHHHHHHhc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHh
Confidence 3456676665 24579999999999999999999999999999999999888777777865 3332 1222
Q ss_pred cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCc--ccChHhhcCCCcce
Q psy4626 131 RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNT--EIDVNSLRTPDLTW 182 (542)
Q Consensus 131 ~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~--eid~~aL~~~~l~v 182 (542)
.++|++|+++|....+ .+.++.+++++.++.+|.... .++...+..+++++
T Consensus 229 ~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i 281 (339)
T 1rjw_A 229 GGVHAAVVTAVSKPAF-QSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKI 281 (339)
T ss_dssp SSEEEEEESSCCHHHH-HHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEE
T ss_pred CCCCEEEECCCCHHHH-HHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEE
Confidence 5799999999976666 478999999999999997643 33433333334433
No 94
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.56 E-value=1.2e-06 Score=90.54 Aligned_cols=185 Identities=18% Similarity=0.230 Sum_probs=114.9
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCC--CeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKN--GCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAE 205 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~--GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~ 205 (542)
+.++++|+++....+ -++++.++.+++ -..+...|.|-+.+|++++..+++.+.....
T Consensus 41 ~~~~~~d~~i~~~~~--~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~------------------ 100 (331)
T 1xdw_A 41 EMAAGFDAVILRGNC--FANKQNLDIYKKLGVKYILTRTAGTDHIDKEYAKELGFPMAFVPR------------------ 100 (331)
T ss_dssp HTTTTCSEEEECTTC--CBCHHHHHHHHHHTCCEEEESSSCCTTBCHHHHHHTTCCEECCCC------------------
T ss_pred HHhcCCeEEEEeCCC--CCCHHHHhhCcccCceEEEEccccccccCHHHHHhCCcEEEeCCC------------------
Confidence 346889999875322 367788888876 6778888888888999888765554433210
Q ss_pred CCcccccCCCChhHHHhhHH------HHHHHHHHHHhcCCCCCCC--CccccCChhhHHHHHHhcCCcccc----ccccc
Q psy4626 206 GRLVNLSCSSLPSFVVSITA------CTQALALIELFNAPSGRYK--SDVYLLPKKMDEYVASLHLPTFDA----HLTEL 273 (542)
Q Consensus 206 GrLvnl~~~thp~~vmd~sf------a~q~la~~~L~~~~~~~~~--~gv~~lp~~~d~~VA~l~L~~lg~----~i~~l 273 (542)
.++..+-+..+ +.++-......+. ++|. .+. ... ++..+++|+ .|++.
T Consensus 101 ---------~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~--g~w~~~~~~--~~~-------~l~g~~vgIiG~G~IG~~ 160 (331)
T 1xdw_A 101 ---------YSPNAIAELAVTQAMMLLRHTAYTTSRTAK--KNFKVDAFM--FSK-------EVRNCTVGVVGLGRIGRV 160 (331)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHTTHHHHHHHHTT--TCCCCCSTT--CCC-------CGGGSEEEEECCSHHHHH
T ss_pred ---------CCcHHHHHHHHHHHHHHHhCHHHHHHHHHc--CCCccccCc--Ccc-------CCCCCEEEEECcCHHHHH
Confidence 01111111111 1111111122222 4553 111 011 234456666 88999
Q ss_pred cHHHHhhcCCC--CCCCCCCCccccCCeeeeehhhhcccCcEEEE----ccCCCCccCHhHHhcCCCCcEEEccCCCCcc
Q psy4626 274 SDEQAKYMGLN--KAGPFKPSYYSMDGFSVVKLNEVIRTVDIVVT----ATGNKNVVTREHMDKMKNGCVVCNMGHSNTE 347 (542)
Q Consensus 274 t~~~a~~lg~~--e~~p~~a~ea~mdG~~v~~~~~a~~~~d~~~t----~tg~~~vi~~~~~~~mk~gail~n~gh~~~E 347 (542)
.+++++++|+. ..||...-++ -++....+++++++++|+|++ +..++++|+.+.|+.||+|++++|+|++..
T Consensus 161 ~A~~l~~~G~~V~~~d~~~~~~~-~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~- 238 (331)
T 1xdw_A 161 AAQIFHGMGATVIGEDVFEIKGI-EDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQL- 238 (331)
T ss_dssp HHHHHHHTTCEEEEECSSCCCSC-TTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGG-
T ss_pred HHHHHHHCCCEEEEECCCccHHH-HhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCccc-
Confidence 99999999983 2233222111 133555689999999999999 346789999999999999999999999876
Q ss_pred ccccccc
Q psy4626 348 IDVNSLR 354 (542)
Q Consensus 348 i~~~~l~ 354 (542)
+|-++|.
T Consensus 239 vd~~aL~ 245 (331)
T 1xdw_A 239 VDTEAVI 245 (331)
T ss_dssp BCHHHHH
T ss_pred ccHHHHH
Confidence 3444444
No 95
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.55 E-value=2.7e-07 Score=95.63 Aligned_cols=187 Identities=12% Similarity=0.186 Sum_probs=120.7
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.++++|+++....+ -++++.++.+++-..+...|.|-+.+|+++..++++.+....
T Consensus 63 ~~~~~~d~li~~~~~--~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p--------------------- 119 (335)
T 2g76_A 63 AELQDCEGLIVRSAT--KVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTP--------------------- 119 (335)
T ss_dssp HHGGGCSEEEECSSS--CBCHHHHHHCSSCCEEEESSSSCTTBCHHHHHHHTCEEECCS---------------------
T ss_pred HHhcCceEEEEcCCC--CCCHHHHhhCCCCcEEEECCCCcchhChHHHHhCCeEEEECC---------------------
Confidence 446889999874322 367788999998889999999988899887765443332211
Q ss_pred cccccCCCChhHHHhh------HHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHH
Q psy4626 208 LVNLSCSSLPSFVVSI------TACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQ 277 (542)
Q Consensus 208 Lvnl~~~thp~~vmd~------sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~ 277 (542)
. .++..+-+. +++.++.......+. ++|...-. .+. ++..+++|+ .|++..+++
T Consensus 120 -----~-~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~--g~W~~~~~-~~~-------~l~g~tvgIIGlG~IG~~vA~~ 183 (335)
T 2g76_A 120 -----N-GNSLSAAELTCGMIMCLARQIPQATASMKD--GKWERKKF-MGT-------ELNGKTLGILGLGRIGREVATR 183 (335)
T ss_dssp -----S-TTHHHHHHHHHHHHHHHHHTHHHHHHHHHT--TCCCTGGG-CBC-------CCTTCEEEEECCSHHHHHHHHH
T ss_pred -----C-ccchHHHHHHHHHHHHHHhchHHHHHHHHc--CCCCccCC-CCc-------CCCcCEEEEEeECHHHHHHHHH
Confidence 0 011111111 222222211222232 46754211 011 344566666 888889999
Q ss_pred HhhcCCC--CCCCCCCC-ccccCCeeeeehhhhcccCcEEEEc----cCCCCccCHhHHhcCCCCcEEEccCCCCccccc
Q psy4626 278 AKYMGLN--KAGPFKPS-YYSMDGFSVVKLNEVIRTVDIVVTA----TGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDV 350 (542)
Q Consensus 278 a~~lg~~--e~~p~~a~-ea~mdG~~v~~~~~a~~~~d~~~t~----tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~ 350 (542)
++.+|+. -.||...- .+...|++..+++++++++|+|+++ ..++++|+.+.|+.||+|++++|+|++.+ +|-
T Consensus 184 l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~v-vd~ 262 (335)
T 2g76_A 184 MQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGI-VDE 262 (335)
T ss_dssp HHTTTCEEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTS-BCH
T ss_pred HHHCCCEEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccc-cCH
Confidence 9999984 23443322 3445687777899999999999993 35789999999999999999999999875 453
Q ss_pred cccc
Q psy4626 351 NSLR 354 (542)
Q Consensus 351 ~~l~ 354 (542)
.+|.
T Consensus 263 ~aL~ 266 (335)
T 2g76_A 263 GALL 266 (335)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4343
No 96
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=98.53 E-value=6e-07 Score=93.34 Aligned_cols=103 Identities=19% Similarity=0.182 Sum_probs=81.2
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCce-eeCHH-------HHh--
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFS-VVKLN-------EVI-- 130 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~-v~~l~-------e~l-- 130 (542)
..|+++.+.. ...+|++|+|+|.|+||+.+++.++.+|+ +|++++.++.+...+...|++ +++.. +.+
T Consensus 182 ta~~~l~~~~-~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~ 260 (376)
T 1e3i_A 182 SGYGAAINTA-KVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITE 260 (376)
T ss_dssp HHHHHHHTTS-CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHH
T ss_pred HHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHH
Confidence 3455554332 24579999999999999999999999999 899999999998888888875 33322 222
Q ss_pred ---cCCcEEEEcCCCcccCCHHHHhccCCC-eEEEeccCC
Q psy4626 131 ---RTVDIVVTATGNKNVVTREHMDKMKNG-CVVCNMGHS 166 (542)
Q Consensus 131 ---~~aDvVi~atG~~~lI~~e~l~~mk~G-ailvnvG~g 166 (542)
.++|+||+++|....+ .+.++.++++ +.++.+|..
T Consensus 261 ~~~~g~Dvvid~~G~~~~~-~~~~~~l~~~~G~iv~~G~~ 299 (376)
T 1e3i_A 261 LTAGGVDYSLDCAGTAQTL-KAAVDCTVLGWGSCTVVGAK 299 (376)
T ss_dssp HHTSCBSEEEESSCCHHHH-HHHHHTBCTTTCEEEECCCS
T ss_pred HhCCCccEEEECCCCHHHH-HHHHHHhhcCCCEEEEECCC
Confidence 2689999999986666 3789999999 999999864
No 97
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.52 E-value=4.4e-07 Score=91.74 Aligned_cols=91 Identities=23% Similarity=0.429 Sum_probs=75.4
Q ss_pred HHHHHHHHHHhhcCccccCcEEEEEcCCh-hHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEE
Q psy4626 59 CRESIIDSLKRSTDVMFGGKQVVLCGYGE-VGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVV 137 (542)
Q Consensus 59 ~~~s~~~ai~r~~~~~l~GktVvViG~G~-IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi 137 (542)
+..+++..+.+ .+..+.|++++|+|.|. +|+.+|..|...|++|++++.. ..++++.++.||+||
T Consensus 143 Tp~gv~~lL~~-~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~-------------t~~L~~~~~~ADIVI 208 (285)
T 3p2o_A 143 TPLGVMKLLKA-YEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK-------------TKDLSLYTRQADLII 208 (285)
T ss_dssp HHHHHHHHHHH-TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT-------------CSCHHHHHTTCSEEE
T ss_pred CHHHHHHHHHH-hCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC-------------chhHHHHhhcCCEEE
Confidence 44556665444 45789999999999987 7999999999999999999742 235778899999999
Q ss_pred EcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 138 TATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 138 ~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
.++|.+++|+++ .+|+|++++++|..
T Consensus 209 ~Avg~p~~I~~~---~vk~GavVIDVgi~ 234 (285)
T 3p2o_A 209 VAAGCVNLLRSD---MVKEGVIVVDVGIN 234 (285)
T ss_dssp ECSSCTTCBCGG---GSCTTEEEEECCCE
T ss_pred ECCCCCCcCCHH---HcCCCeEEEEeccC
Confidence 999999999864 46999999999964
No 98
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.52 E-value=4e-07 Score=92.06 Aligned_cols=92 Identities=26% Similarity=0.398 Sum_probs=75.5
Q ss_pred HHHHHHHHHHhhcCccccCcEEEEEcCCh-hHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEE
Q psy4626 59 CRESIIDSLKRSTDVMFGGKQVVLCGYGE-VGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVV 137 (542)
Q Consensus 59 ~~~s~~~ai~r~~~~~l~GktVvViG~G~-IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi 137 (542)
+-.+++..+.+ .+..+.|++++|+|.|. +|+.+|..|...|++|++++.. ..++++.++.||+||
T Consensus 144 Tp~gv~~lL~~-~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~-------------T~~L~~~~~~ADIVI 209 (286)
T 4a5o_A 144 TPKGIMTLLAS-TGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF-------------TRDLADHVSRADLVV 209 (286)
T ss_dssp HHHHHHHHHHH-TTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT-------------CSCHHHHHHTCSEEE
T ss_pred CHHHHHHHHHH-hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC-------------CcCHHHHhccCCEEE
Confidence 34556665444 45789999999999876 8999999999999999999742 235778889999999
Q ss_pred EcCCCcccCCHHHHhccCCCeEEEeccCCC
Q psy4626 138 TATGNKNVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 138 ~atG~~~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
.++|.+++++++. +|+|++++++|...
T Consensus 210 ~Avg~p~~I~~~~---vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 210 VAAGKPGLVKGEW---IKEGAIVIDVGINR 236 (286)
T ss_dssp ECCCCTTCBCGGG---SCTTCEEEECCSCS
T ss_pred ECCCCCCCCCHHH---cCCCeEEEEecccc
Confidence 9999999998644 69999999999753
No 99
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=98.51 E-value=1.3e-07 Score=97.82 Aligned_cols=121 Identities=21% Similarity=0.211 Sum_probs=87.7
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCE-EEEEeCCchhhhhhhcCCceee-------CHH---HHh
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCV-IYITEIDPICALQACMDGFSVV-------KLN---EVI 130 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~-Viv~d~dp~r~~~A~~~G~~v~-------~l~---e~l 130 (542)
..|+++.++ ...+|++|+|+|.|.+|+.+++.++.+|++ |++++.++.+...+...+..+. +.+ +.+
T Consensus 167 ta~~~l~~~--~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v 244 (363)
T 3m6i_A 167 VALAGLQRA--GVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKI 244 (363)
T ss_dssp HHHHHHHHH--TCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHH
T ss_pred HHHHHHHHc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHH
Confidence 456676554 245799999999999999999999999997 9999999988776655431211 111 111
Q ss_pred ------cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC--cccChHhhcCCCcceeee
Q psy4626 131 ------RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN--TEIDVNSLRTPDLTWEKV 185 (542)
Q Consensus 131 ------~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~--~eid~~aL~~~~l~v~~~ 185 (542)
.++|++++++|....+. ..++.+++++.++.+|... ..++...+..+++++.+.
T Consensus 245 ~~~t~g~g~Dvvid~~g~~~~~~-~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~ 306 (363)
T 3m6i_A 245 VESFGGIEPAVALECTGVESSIA-AAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQ 306 (363)
T ss_dssp HHHTSSCCCSEEEECSCCHHHHH-HHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEEC
T ss_pred HHHhCCCCCCEEEECCCChHHHH-HHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEc
Confidence 37999999999876664 7899999999999998764 345555554444544443
No 100
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=98.50 E-value=2.8e-07 Score=95.53 Aligned_cols=118 Identities=17% Similarity=0.113 Sum_probs=86.7
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeC-----HHHHh----
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVK-----LNEVI---- 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~-----l~e~l---- 130 (542)
...|+++.+.. ...+|++|+|+|.|.||..+++.++.+|++|++++.++.+...+...|++ +++ ..+.+
T Consensus 175 ~ta~~al~~~~-~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~ 253 (363)
T 3uog_A 175 LTAWFALVEKG-HLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALT 253 (363)
T ss_dssp HHHHHHHTTTT-CCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHh
Confidence 34566764332 24589999999999999999999999999999999999888878777875 332 22221
Q ss_pred --cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC---cccChHhhcCCCcc
Q psy4626 131 --RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN---TEIDVNSLRTPDLT 181 (542)
Q Consensus 131 --~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~---~eid~~aL~~~~l~ 181 (542)
.++|++++++|. ..+ .+.++.+++++.++.+|... ..++...+..++++
T Consensus 254 ~g~g~D~vid~~g~-~~~-~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~ 307 (363)
T 3uog_A 254 GDRGADHILEIAGG-AGL-GQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPV 307 (363)
T ss_dssp TTCCEEEEEEETTS-SCH-HHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCE
T ss_pred CCCCceEEEECCCh-HHH-HHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcE
Confidence 279999999984 445 47899999999999998653 24444444333333
No 101
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=98.50 E-value=5.7e-07 Score=93.40 Aligned_cols=103 Identities=19% Similarity=0.172 Sum_probs=81.0
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCce-eeCH-------HHHh--
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFS-VVKL-------NEVI-- 130 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~-v~~l-------~e~l-- 130 (542)
..|+++.+.. ...+|++|+|+|.|.||+.+++.++.+|+ +|++++.++.+...+...|++ +++. .+.+
T Consensus 178 ta~~~l~~~~-~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~ 256 (373)
T 1p0f_A 178 TGYGAAVNTA-KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICE 256 (373)
T ss_dssp HHHHHHHTTT-CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHH
T ss_pred HHHHHHHhcc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHH
Confidence 3455554332 24579999999999999999999999999 899999999998888888875 3332 2222
Q ss_pred ---cCCcEEEEcCCCcccCCHHHHhccCCC-eEEEeccCC
Q psy4626 131 ---RTVDIVVTATGNKNVVTREHMDKMKNG-CVVCNMGHS 166 (542)
Q Consensus 131 ---~~aDvVi~atG~~~lI~~e~l~~mk~G-ailvnvG~g 166 (542)
.++|+||+++|....+ .+.++.++++ +.++.+|..
T Consensus 257 ~t~gg~Dvvid~~g~~~~~-~~~~~~l~~~~G~iv~~G~~ 295 (373)
T 1p0f_A 257 KTNGGVDYAVECAGRIETM-MNALQSTYCGSGVTVVLGLA 295 (373)
T ss_dssp HTTSCBSEEEECSCCHHHH-HHHHHTBCTTTCEEEECCCC
T ss_pred HhCCCCCEEEECCCCHHHH-HHHHHHHhcCCCEEEEEccC
Confidence 2689999999986666 4789999999 999999865
No 102
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.50 E-value=3.3e-07 Score=93.92 Aligned_cols=185 Identities=17% Similarity=0.212 Sum_probs=119.4
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.++++|+++..... -++++.++.+++-..+...|.|-+.+|++++.++++.+....
T Consensus 42 ~~~~~~d~~i~~~~~--~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~--------------------- 98 (313)
T 2ekl_A 42 NIIGNYDIIVVRSRT--KVTKDVIEKGKKLKIIARAGIGLDNIDTEEAEKRNIKVVYAP--------------------- 98 (313)
T ss_dssp HHGGGCSEEEECSSS--CBCHHHHHHCTTCCEEEECSSCCTTBCHHHHHHTTCEEECCT---------------------
T ss_pred HHhcCCeEEEEcCCC--CCCHHHHhhCCCCeEEEEcCCCCCccCHHHHHhCCeEEEeCC---------------------
Confidence 456889998875322 367788999998889999999988899988775544333221
Q ss_pred cccccCCCChhHHHh------hHHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHH
Q psy4626 208 LVNLSCSSLPSFVVS------ITACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQ 277 (542)
Q Consensus 208 Lvnl~~~thp~~vmd------~sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~ 277 (542)
.. ++..+-+ ++++.++.......+. ++|... .+. ++..+++|+ .|++..+++
T Consensus 99 -----g~-~~~~vAE~~~~~~L~~~R~~~~~~~~~~~--g~w~~~---~~~-------~l~g~~vgIIG~G~IG~~~A~~ 160 (313)
T 2ekl_A 99 -----GA-STDSAVELTIGLMIAAARKMYTSMALAKS--GIFKKI---EGL-------ELAGKTIGIVGFGRIGTKVGII 160 (313)
T ss_dssp -----TT-THHHHHHHHHHHHHHHHHTHHHHHHHHHT--TCCCCC---CCC-------CCTTCEEEEESCSHHHHHHHHH
T ss_pred -----CC-CchHHHHHHHHHHHHHHhCHHHHHHHHHc--CCCCCC---CCC-------CCCCCEEEEEeeCHHHHHHHHH
Confidence 00 1111111 1222222222222222 467411 111 234456665 888888999
Q ss_pred HhhcCCC--CCCCCCC-CccccCCeeeeehhhhcccCcEEEEcc----CCCCccCHhHHhcCCCCcEEEccCCCCccccc
Q psy4626 278 AKYMGLN--KAGPFKP-SYYSMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGHSNTEIDV 350 (542)
Q Consensus 278 a~~lg~~--e~~p~~a-~ea~mdG~~v~~~~~a~~~~d~~~t~t----g~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~ 350 (542)
++.+|+. ..||... .++.-.|++..+++++++++|+|++++ .++++|+.+.|+.||+|++++|+|+++. +|-
T Consensus 161 l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~-vd~ 239 (313)
T 2ekl_A 161 ANAMGMKVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVA-VNG 239 (313)
T ss_dssp HHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGG-BCH
T ss_pred HHHCCCEEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcc-cCH
Confidence 9999983 2233222 234456777778999999999999954 3889999999999999999999999765 454
Q ss_pred cccc
Q psy4626 351 NSLR 354 (542)
Q Consensus 351 ~~l~ 354 (542)
.+|.
T Consensus 240 ~aL~ 243 (313)
T 2ekl_A 240 KALL 243 (313)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 103
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=98.49 E-value=5.5e-07 Score=94.33 Aligned_cols=103 Identities=24% Similarity=0.306 Sum_probs=81.8
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCceeeCH------HHHh---
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFSVVKL------NEVI--- 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~v~~l------~e~l--- 130 (542)
...|+++.++ ...+|++|+|+|.|.||+.+++.++.+|+ +|++++.++.|+..+...|+++++. .+.+
T Consensus 172 ~ta~~al~~~--~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 172 PTGYHGAVTA--GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAAL 249 (398)
T ss_dssp HHHHHHHHHT--TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHH
T ss_pred HHHHHHHHHc--CCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHH
Confidence 3456777644 34589999999999999999999999999 8999999999988888888875432 2222
Q ss_pred ---cCCcEEEEcCCCcc---------------cCCHHHHhccCCCeEEEeccCC
Q psy4626 131 ---RTVDIVVTATGNKN---------------VVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 131 ---~~aDvVi~atG~~~---------------lI~~e~l~~mk~GailvnvG~g 166 (542)
.++|+||+++|... .+ .+.++.+++++.++.+|..
T Consensus 250 t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~G~iv~~G~~ 302 (398)
T 1kol_A 250 LGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVL-NSLMQVTRVAGKIGIPGLY 302 (398)
T ss_dssp HSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHH-HHHHHHEEEEEEEEECSCC
T ss_pred hCCCCCCEEEECCCCcccccccccccccchHHHH-HHHHHHHhcCCEEEEeccc
Confidence 26899999998653 34 4788999999999999864
No 104
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.49 E-value=3.2e-07 Score=94.36 Aligned_cols=105 Identities=21% Similarity=0.276 Sum_probs=79.1
Q ss_pred HHHHHHHHHHhh--------cCccccCcEEEEEcCCh-hHHHHHHHHHhCCCEEEEEeCCchhhh-hhhcCCc---ee--
Q psy4626 59 CRESIIDSLKRS--------TDVMFGGKQVVLCGYGE-VGKGCCQSLKGLGCVIYITEIDPICAL-QACMDGF---SV-- 123 (542)
Q Consensus 59 ~~~s~~~ai~r~--------~~~~l~GktVvViG~G~-IG~~vA~~l~~~Ga~Viv~d~dp~r~~-~A~~~G~---~v-- 123 (542)
+..+++.-+.+. .+..+.|++|+|+|.|. +|+.+|+.|.+.|++|++++++..+.. .+...+. ..
T Consensus 151 Tp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~ 230 (320)
T 1edz_A 151 TPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVED 230 (320)
T ss_dssp HHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEE
T ss_pred cHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccc
Confidence 345555555553 45578999999999996 599999999999999999998855432 1222221 11
Q ss_pred ------eCHHHHhcCCcEEEEcCCCccc-CCHHHHhccCCCeEEEeccCC
Q psy4626 124 ------VKLNEVIRTVDIVVTATGNKNV-VTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 124 ------~~l~e~l~~aDvVi~atG~~~l-I~~e~l~~mk~GailvnvG~g 166 (542)
.++.+.+++||+||.++|.++. |+.+. +|+|++++++|..
T Consensus 231 ~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 231 LGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp EEECCHHHHHHHHHHCSEEEECCCCTTCCBCTTT---SCTTEEEEECSSS
T ss_pred cccccHhHHHHHhccCCEEEECCCCCcceeCHHH---cCCCeEEEEcCCC
Confidence 3467888999999999999887 87544 6999999999975
No 105
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=98.48 E-value=3.7e-07 Score=93.91 Aligned_cols=117 Identities=20% Similarity=0.252 Sum_probs=87.3
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCce-eeCH-----HHHh----
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFS-VVKL-----NEVI---- 130 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~-v~~l-----~e~l---- 130 (542)
..++++.++ + . +|++|+|+|.|.||+.+++.++.+|+ +|+++++++.+...+...|++ +++. .+.+
T Consensus 156 ta~~~l~~~-~-~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~ 232 (348)
T 2d8a_A 156 NAVDTVLAG-P-I-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDIT 232 (348)
T ss_dssp HHHHHHTTS-C-C-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHT
T ss_pred HHHHHHHhc-C-C-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHc
Confidence 446777443 3 3 89999999999999999999999999 999999999888777777765 3332 2222
Q ss_pred --cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC--cccCh-HhhcCCCcce
Q psy4626 131 --RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN--TEIDV-NSLRTPDLTW 182 (542)
Q Consensus 131 --~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~--~eid~-~aL~~~~l~v 182 (542)
.++|++|+++|....+ .+.++.+++++.++.+|... ..++. ..+..+++++
T Consensus 233 ~g~g~D~vid~~g~~~~~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i 288 (348)
T 2d8a_A 233 DGNGVDVFLEFSGAPKAL-EQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTI 288 (348)
T ss_dssp TTSCEEEEEECSCCHHHH-HHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEE
T ss_pred CCCCCCEEEECCCCHHHH-HHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEE
Confidence 2689999999976666 37889999999999998754 34444 4444444433
No 106
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=98.48 E-value=3.4e-07 Score=96.90 Aligned_cols=91 Identities=24% Similarity=0.311 Sum_probs=72.4
Q ss_pred ccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhh-hhhhcCCceee---CHHHHhcCCcEEEEcCCCc-ccCCH
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICA-LQACMDGFSVV---KLNEVIRTVDIVVTATGNK-NVVTR 148 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~-~~A~~~G~~v~---~l~e~l~~aDvVi~atG~~-~lI~~ 148 (542)
+.|++|+|+|+|.+|+.+++.|+.+|+ +|+++++++.++ ..+...|..++ ++.+.+.++|+||+|||.. ++++.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~~~~~~~ 244 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPVIHV 244 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCCBCH
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCCCceecH
Confidence 689999999999999999999999999 999999998876 34555566543 4556678999999998854 45676
Q ss_pred HHHhc--cC----CCeEEEeccC
Q psy4626 149 EHMDK--MK----NGCVVCNMGH 165 (542)
Q Consensus 149 e~l~~--mk----~GailvnvG~ 165 (542)
+.++. || ++.++++++.
T Consensus 245 ~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 245 DDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp HHHHHHHHHCSSCCCEEEEECCS
T ss_pred HHHHHHHHhccCCCCEEEEEccC
Confidence 77887 42 5567778775
No 107
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.48 E-value=2.2e-07 Score=96.03 Aligned_cols=186 Identities=17% Similarity=0.250 Sum_probs=115.1
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCC--CeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKN--GCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAE 205 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~--GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~ 205 (542)
+.++++|+++....+ -++++.++.+++ -..+...|.|-+.+|++++..+++.+..+..
T Consensus 40 ~~~~~~d~~i~~~~~--~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~------------------ 99 (333)
T 1dxy_A 40 EWAKGFDGINSLQTT--PYAAGVFEKMHAYGIKFLTIRNVGTDNIDMTAMKQYGIRLSNVPA------------------ 99 (333)
T ss_dssp GGGTTCSEEEECCSS--CBCHHHHHHHHHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTT------------------
T ss_pred HHhcCCeEEEEcCCC--CCCHHHHHhCcccCceEEEEcCcccCccCHHHHHhCCCEEEeCCC------------------
Confidence 456889999875322 467788888876 6678888988888999888755544332210
Q ss_pred CCcccccCCCChhHHHhhHHHH------HHHHHHHHhcCCCCCCC--CccccCChhhHHHHHHhcCCcccc----ccccc
Q psy4626 206 GRLVNLSCSSLPSFVVSITACT------QALALIELFNAPSGRYK--SDVYLLPKKMDEYVASLHLPTFDA----HLTEL 273 (542)
Q Consensus 206 GrLvnl~~~thp~~vmd~sfa~------q~la~~~L~~~~~~~~~--~gv~~lp~~~d~~VA~l~L~~lg~----~i~~l 273 (542)
.++..+-+..++. ++-......+. ++|. .+. .+. ++..+++|+ .|++.
T Consensus 100 ---------~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~--g~w~~~~~~--~~~-------~l~g~~vgIiG~G~IG~~ 159 (333)
T 1dxy_A 100 ---------YSPAAIAEFALTDTLYLLRNMGKVQAQLQA--GDYEKAGTF--IGK-------ELGQQTVGVMGTGHIGQV 159 (333)
T ss_dssp ---------SCHHHHHHHHHHHHHHHHTTHHHHHHHHHT--TCHHHHTCC--CCC-------CGGGSEEEEECCSHHHHH
T ss_pred ---------CCchHHHHHHHHHHHHHhhhHHHHHHHHHc--CCcccccCC--Ccc-------CCCCCEEEEECcCHHHHH
Confidence 0111111111111 11111111122 3331 110 011 344456666 88889
Q ss_pred cHHHHhhcCCC--CCCCCCCCccccCCeeeeehhhhcccCcEEEEcc----CCCCccCHhHHhcCCCCcEEEccCCCCcc
Q psy4626 274 SDEQAKYMGLN--KAGPFKPSYYSMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGHSNTE 347 (542)
Q Consensus 274 t~~~a~~lg~~--e~~p~~a~ea~mdG~~v~~~~~a~~~~d~~~t~t----g~~~vi~~~~~~~mk~gail~n~gh~~~E 347 (542)
.+++++++|+. -.||...-++ -++.+..+++++++++|+|++.. .++++|+.+.|+.||+|++++|+|++..
T Consensus 160 ~A~~l~~~G~~V~~~d~~~~~~~-~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~- 237 (333)
T 1dxy_A 160 AIKLFKGFGAKVIAYDPYPMKGD-HPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNL- 237 (333)
T ss_dssp HHHHHHHTTCEEEEECSSCCSSC-CTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTS-
T ss_pred HHHHHHHCCCEEEEECCCcchhh-HhccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcc-
Confidence 99999999984 2233332222 23355568999999999999943 4788999999999999999999999876
Q ss_pred cccccccC
Q psy4626 348 IDVNSLRT 355 (542)
Q Consensus 348 i~~~~l~~ 355 (542)
+|-++|.+
T Consensus 238 vd~~aL~~ 245 (333)
T 1dxy_A 238 IDTQAMLS 245 (333)
T ss_dssp BCHHHHHH
T ss_pred cCHHHHHH
Confidence 56555554
No 108
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.48 E-value=5.3e-07 Score=91.79 Aligned_cols=91 Identities=27% Similarity=0.424 Sum_probs=74.3
Q ss_pred HHHHHHHHHHhhcCccccCcEEEEEcCCh-hHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHH--HHhcCCcE
Q psy4626 59 CRESIIDSLKRSTDVMFGGKQVVLCGYGE-VGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLN--EVIRTVDI 135 (542)
Q Consensus 59 ~~~s~~~ai~r~~~~~l~GktVvViG~G~-IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~--e~l~~aDv 135 (542)
+-.+++..+.+ .+..+.|++++|+|.|. +|+.+|..|...|++|+++++... +++ +.++.||+
T Consensus 148 Tp~gv~~lL~~-~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~-------------~l~l~~~~~~ADI 213 (300)
T 4a26_A 148 TAKGVIVLLKR-CGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS-------------TEDMIDYLRTADI 213 (300)
T ss_dssp HHHHHHHHHHH-HTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC-------------HHHHHHHHHTCSE
T ss_pred CHHHHHHHHHH-cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC-------------CchhhhhhccCCE
Confidence 34556665444 45789999999999887 799999999999999999985321 344 78899999
Q ss_pred EEEcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 136 VVTATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 136 Vi~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
||.++|.+++|+++. +|+|++++++|..
T Consensus 214 VI~Avg~p~~I~~~~---vk~GavVIDvgi~ 241 (300)
T 4a26_A 214 VIAAMGQPGYVKGEW---IKEGAAVVDVGTT 241 (300)
T ss_dssp EEECSCCTTCBCGGG---SCTTCEEEECCCE
T ss_pred EEECCCCCCCCcHHh---cCCCcEEEEEecc
Confidence 999999999998644 6999999999964
No 109
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.47 E-value=7.5e-07 Score=90.65 Aligned_cols=92 Identities=25% Similarity=0.367 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHhhcCccccCcEEEEEcCCh-hHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEE
Q psy4626 58 MCRESIIDSLKRSTDVMFGGKQVVLCGYGE-VGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIV 136 (542)
Q Consensus 58 g~~~s~~~ai~r~~~~~l~GktVvViG~G~-IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvV 136 (542)
.|-.+++..+.+ .+..+.|++|+|+|.|. +|+.+|+.|...|++|++++.. ..++.+.++.||+|
T Consensus 147 cTp~gi~~ll~~-~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~-------------t~~L~~~~~~ADIV 212 (301)
T 1a4i_A 147 CTPKGCLELIKE-TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK-------------TAHLDEEVNKGDIL 212 (301)
T ss_dssp HHHHHHHHHHHT-TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT-------------CSSHHHHHTTCSEE
T ss_pred chHHHHHHHHHH-cCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC-------------cccHHHHhccCCEE
Confidence 345666665544 45689999999999996 7999999999999999999732 24677888999999
Q ss_pred EEcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 137 VTATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 137 i~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
|.++|.+++|+++. +|+|++++++|..
T Consensus 213 I~Avg~p~~I~~~~---vk~GavVIDVgi~ 239 (301)
T 1a4i_A 213 VVATGQPEMVKGEW---IKPGAIVIDCGIN 239 (301)
T ss_dssp EECCCCTTCBCGGG---SCTTCEEEECCCB
T ss_pred EECCCCcccCCHHH---cCCCcEEEEccCC
Confidence 99999999998655 6899999999964
No 110
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=98.47 E-value=1.1e-06 Score=91.34 Aligned_cols=103 Identities=19% Similarity=0.186 Sum_probs=80.7
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCce-eeCH-------HHHh--
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFS-VVKL-------NEVI-- 130 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~-v~~l-------~e~l-- 130 (542)
..|+++.+.. ...+|++|+|+|.|.||+.+++.++.+|+ +|++++.++.+...+...|++ +++. .+.+
T Consensus 178 ta~~~l~~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~ 256 (374)
T 2jhf_A 178 TGYGSAVKVA-KVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTE 256 (374)
T ss_dssp HHHHHHHTTT-CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHH
T ss_pred HHHHHHHhcc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHH
Confidence 3455554332 24579999999999999999999999999 899999999988888888875 3332 2222
Q ss_pred ---cCCcEEEEcCCCcccCCHHHHhccCCC-eEEEeccCC
Q psy4626 131 ---RTVDIVVTATGNKNVVTREHMDKMKNG-CVVCNMGHS 166 (542)
Q Consensus 131 ---~~aDvVi~atG~~~lI~~e~l~~mk~G-ailvnvG~g 166 (542)
.++|++|+++|....+ .+.++.++++ +.++.+|..
T Consensus 257 ~~~~g~D~vid~~g~~~~~-~~~~~~l~~~~G~iv~~G~~ 295 (374)
T 2jhf_A 257 MSNGGVDFSFEVIGRLDTM-VTALSCCQEAYGVSVIVGVP 295 (374)
T ss_dssp HTTSCBSEEEECSCCHHHH-HHHHHHBCTTTCEEEECSCC
T ss_pred HhCCCCcEEEECCCCHHHH-HHHHHHhhcCCcEEEEeccC
Confidence 2689999999986666 3789999999 999999864
No 111
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=98.47 E-value=5.1e-07 Score=95.06 Aligned_cols=122 Identities=16% Similarity=0.142 Sum_probs=90.2
Q ss_pred HHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCce-eeCH-----HHH----h-
Q psy4626 63 IIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFS-VVKL-----NEV----I- 130 (542)
Q Consensus 63 ~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~-v~~l-----~e~----l- 130 (542)
.|+++........+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...+...|++ +++. .+. .
T Consensus 200 a~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~ 279 (404)
T 3ip1_A 200 AYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTN 279 (404)
T ss_dssp HHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTT
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhC
Confidence 466664332234689999999999999999999999999 999999999998888888875 3332 222 2
Q ss_pred -cCCcEEEEcCCCcc-cCCHHHHhcc----CCCeEEEeccCCC--cccChHhhcCCCcceeee
Q psy4626 131 -RTVDIVVTATGNKN-VVTREHMDKM----KNGCVVCNMGHSN--TEIDVNSLRTPDLTWEKV 185 (542)
Q Consensus 131 -~~aDvVi~atG~~~-lI~~e~l~~m----k~GailvnvG~g~--~eid~~aL~~~~l~v~~~ 185 (542)
.++|++|+++|... .+ ...++.+ ++++.++.+|... ..++...+..+++++.+.
T Consensus 280 g~g~D~vid~~g~~~~~~-~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~ 341 (404)
T 3ip1_A 280 GLGAKLFLEATGVPQLVW-PQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGS 341 (404)
T ss_dssp TCCCSEEEECSSCHHHHH-HHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEEC
T ss_pred CCCCCEEEECCCCcHHHH-HHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEe
Confidence 36999999999863 33 3456666 9999999999763 456666665555555443
No 112
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=98.47 E-value=3.1e-07 Score=95.36 Aligned_cols=120 Identities=19% Similarity=0.178 Sum_probs=87.9
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCce-eeC-----HHHHh----
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFS-VVK-----LNEVI---- 130 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~-v~~-----l~e~l---- 130 (542)
..++++.+.. ...+|++|+|+|.|.||..+++.++.+|+ +|++++.++.+...+...|++ +++ ..+.+
T Consensus 177 ta~~al~~~~-~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~ 255 (371)
T 1f8f_A 177 TGAGACINAL-KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEIT 255 (371)
T ss_dssp HHHHHHHTTT-CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT
T ss_pred HHHHHHHhcc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhc
Confidence 3456664332 24579999999999999999999999999 799999999988878777875 332 22222
Q ss_pred -cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC----cccChHhhcCCCccee
Q psy4626 131 -RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN----TEIDVNSLRTPDLTWE 183 (542)
Q Consensus 131 -~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~----~eid~~aL~~~~l~v~ 183 (542)
.++|+||+++|....+ .+.++.+++++.++.+|... ..++...+..+++++.
T Consensus 256 ~gg~D~vid~~g~~~~~-~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~ 312 (371)
T 1f8f_A 256 DGGVNFALESTGSPEIL-KQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTIL 312 (371)
T ss_dssp TSCEEEEEECSCCHHHH-HHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEE
T ss_pred CCCCcEEEECCCCHHHH-HHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEE
Confidence 2589999999976666 37899999999999998653 2455544443444433
No 113
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=98.47 E-value=2.2e-07 Score=97.49 Aligned_cols=102 Identities=21% Similarity=0.285 Sum_probs=81.2
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCceeeCH------HHHh----
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFSVVKL------NEVI---- 130 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~v~~l------~e~l---- 130 (542)
..|+++.++ ...+|++|+|+|+|.||..+++.++.+|+ +|+++++++.+...+...|+++++. .+.+
T Consensus 173 ta~~al~~~--~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~ 250 (398)
T 2dph_A 173 TGFHGCVSA--GVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQIL 250 (398)
T ss_dssp HHHHHHHHT--TCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHH
T ss_pred HHHHHHHHc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHh
Confidence 456777543 34589999999999999999999999999 9999999999888888888865432 2222
Q ss_pred --cCCcEEEEcCCCcc--------------cCCHHHHhccCCCeEEEeccCC
Q psy4626 131 --RTVDIVVTATGNKN--------------VVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 131 --~~aDvVi~atG~~~--------------lI~~e~l~~mk~GailvnvG~g 166 (542)
.++|+||+++|... .+ .+.++.+++++.++.+|..
T Consensus 251 ~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~-~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 251 GKPEVDCGVDAVGFEAHGLGDEANTETPNGAL-NSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHH-HHHHHHEEEEEEEECCSCC
T ss_pred CCCCCCEEEECCCCccccccccccccccHHHH-HHHHHHHhcCCEEEEeccc
Confidence 26899999998653 34 4688999999999999865
No 114
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=98.46 E-value=1.4e-06 Score=90.54 Aligned_cols=103 Identities=20% Similarity=0.295 Sum_probs=80.8
Q ss_pred HHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCce-eeCH-------HHHh---
Q psy4626 63 IIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFS-VVKL-------NEVI--- 130 (542)
Q Consensus 63 ~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~-v~~l-------~e~l--- 130 (542)
.|+++.+.. ...+|++|+|+|.|.||+.+++.++.+|+ +|++++.++.+...+...|++ +++. .+.+
T Consensus 180 a~~~l~~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~ 258 (374)
T 1cdo_A 180 GFGAAVNTA-KVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKM 258 (374)
T ss_dssp HHHHHHTTT-CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHH
T ss_pred HHHHHHhcc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHH
Confidence 455543332 24579999999999999999999999999 899999999988888888875 3332 2222
Q ss_pred --cCCcEEEEcCCCcccCCHHHHhccCCC-eEEEeccCCC
Q psy4626 131 --RTVDIVVTATGNKNVVTREHMDKMKNG-CVVCNMGHSN 167 (542)
Q Consensus 131 --~~aDvVi~atG~~~lI~~e~l~~mk~G-ailvnvG~g~ 167 (542)
.++|++|+++|....+ ...++.++++ +.++.+|...
T Consensus 259 ~~~g~D~vid~~g~~~~~-~~~~~~l~~~~G~iv~~G~~~ 297 (374)
T 1cdo_A 259 TNGGVDFSLECVGNVGVM-RNALESCLKGWGVSVLVGWTD 297 (374)
T ss_dssp HTSCBSEEEECSCCHHHH-HHHHHTBCTTTCEEEECSCCS
T ss_pred hCCCCCEEEECCCCHHHH-HHHHHHhhcCCcEEEEEcCCC
Confidence 2689999999976666 3789999999 9999998653
No 115
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=98.46 E-value=4e-07 Score=91.70 Aligned_cols=118 Identities=17% Similarity=0.202 Sum_probs=83.8
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCH---H---HHhcC
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKL---N---EVIRT 132 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l---~---e~l~~ 132 (542)
-..|+++.+.. ..+|++|+|+|. |.+|+.+++.++.+|++|+++++++.+...+...|.+ +++. + +.+.+
T Consensus 112 ~ta~~~l~~~~--~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~ 189 (302)
T 1iz0_A 112 LTAYLALKRAQ--ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGG 189 (302)
T ss_dssp HHHHHHHHHTT--CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTS
T ss_pred HHHHHHHHHhc--CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcC
Confidence 34466665432 457999999998 9999999999999999999999999888777777865 3332 1 22368
Q ss_pred CcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCc---ccChHhhcCCCccee
Q psy4626 133 VDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNT---EIDVNSLRTPDLTWE 183 (542)
Q Consensus 133 aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~---eid~~aL~~~~l~v~ 183 (542)
+|++|+ +|. ..+ ...++.+++++.++.+|.... +++...+..+++++.
T Consensus 190 ~d~vid-~g~-~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 240 (302)
T 1iz0_A 190 LDLVLE-VRG-KEV-EESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVL 240 (302)
T ss_dssp EEEEEE-CSC-TTH-HHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEE
T ss_pred ceEEEE-CCH-HHH-HHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEE
Confidence 999999 887 445 478999999999999986532 344443433344333
No 116
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.45 E-value=5.7e-07 Score=91.02 Aligned_cols=91 Identities=22% Similarity=0.380 Sum_probs=75.6
Q ss_pred HHHHHHHHHHhhcCccccCcEEEEEcCCh-hHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEE
Q psy4626 59 CRESIIDSLKRSTDVMFGGKQVVLCGYGE-VGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVV 137 (542)
Q Consensus 59 ~~~s~~~ai~r~~~~~l~GktVvViG~G~-IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi 137 (542)
|-.+++..+.+ .+..+.|++|+|+|.|. +|+.+|+.|...|++|++++... .++.+.++.||+||
T Consensus 142 Tp~gi~~ll~~-~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------~~L~~~~~~ADIVI 207 (288)
T 1b0a_A 142 TPRGIVTLLER-YNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT-------------KNLRHHVENADLLI 207 (288)
T ss_dssp HHHHHHHHHHH-TTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC-------------SCHHHHHHHCSEEE
T ss_pred cHHHHHHHHHH-cCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc-------------hhHHHHhccCCEEE
Confidence 44556665544 45689999999999996 69999999999999999997432 35678889999999
Q ss_pred EcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 138 TATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 138 ~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
.++|.+++|+++. +|+|++++++|..
T Consensus 208 ~Avg~p~lI~~~~---vk~GavVIDVgi~ 233 (288)
T 1b0a_A 208 VAVGKPGFIPGDW---IKEGAIVIDVGIN 233 (288)
T ss_dssp ECSCCTTCBCTTT---SCTTCEEEECCCE
T ss_pred ECCCCcCcCCHHH---cCCCcEEEEccCC
Confidence 9999999998654 6999999999964
No 117
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=98.45 E-value=8.2e-07 Score=92.68 Aligned_cols=122 Identities=20% Similarity=0.247 Sum_probs=90.2
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCC-CEEEEEeCCchhhhhhhcCCce-eeCHH--------HHh
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLG-CVIYITEIDPICALQACMDGFS-VVKLN--------EVI 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~G-a~Viv~d~dp~r~~~A~~~G~~-v~~l~--------e~l 130 (542)
...++++.++ +...+|++|+|+|.|.+|+.+++.++.+| ++|+++++++.+...+...|++ +++.. +.+
T Consensus 181 ~ta~~al~~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v 259 (380)
T 1vj0_A 181 ATAYHAFDEY-PESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAI 259 (380)
T ss_dssp HHHHHHHHTC-SSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHhc-CCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHH
Confidence 3456677543 21457999999999999999999999999 4999999999988888888875 33221 111
Q ss_pred ------cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC----cccChHh-hcCCCcceee
Q psy4626 131 ------RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN----TEIDVNS-LRTPDLTWEK 184 (542)
Q Consensus 131 ------~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~----~eid~~a-L~~~~l~v~~ 184 (542)
.++|+||+++|....+ .+.++.+++++.++.+|... ..++... +..+++++.+
T Consensus 260 ~~~~~g~g~Dvvid~~g~~~~~-~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g 323 (380)
T 1vj0_A 260 MDITHGRGADFILEATGDSRAL-LEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKG 323 (380)
T ss_dssp HHHTTTSCEEEEEECSSCTTHH-HHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEE
T ss_pred HHHhCCCCCcEEEECCCCHHHH-HHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEE
Confidence 2689999999876566 37899999999999998643 2455554 5555555444
No 118
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.44 E-value=3.6e-07 Score=96.23 Aligned_cols=169 Identities=12% Similarity=0.199 Sum_probs=111.7
Q ss_pred HhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCCc
Q psy4626 129 VIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRL 208 (542)
Q Consensus 129 ~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrL 208 (542)
.++++|+++....+ -++++.++ .++-..+...|.|-+.+|++++.++++.+...
T Consensus 34 ~l~~ad~li~~~~~--~~~~~~l~-~~~Lk~I~~~~~G~D~iD~~~~~~~gI~v~n~----------------------- 87 (380)
T 2o4c_A 34 ALAEVDVLLVRSVT--EVSRAALA-GSPVRFVGTCTIGTDHLDLDYFAEAGIAWSSA----------------------- 87 (380)
T ss_dssp TTTTCSEEEECTTS--CBCHHHHT-TSCCCEEEECSSCSTTBCHHHHHHHTCEEECC-----------------------
T ss_pred HHCCcEEEEEcCCC--CCCHHHhc-CCCceEEEEcCcccchhhHHHHHhCCCEEEeC-----------------------
Confidence 35789999875322 46778888 78888888999998889998886433322211
Q ss_pred ccccCCCChhHHHhhHHHHHHHHHHH-HhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHHHhhcCC
Q psy4626 209 VNLSCSSLPSFVVSITACTQALALIE-LFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQAKYMGL 283 (542)
Q Consensus 209 vnl~~~thp~~vmd~sfa~q~la~~~-L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~a~~lg~ 283 (542)
.. .+. .+.|.++++.+- +.+ +|.. ++..+++|+ .|++..+++++.+|+
T Consensus 88 ---pg-~~~-----~~vAE~~l~~lL~l~r----~~~~--------------~l~g~tvGIIGlG~IG~~vA~~l~~~G~ 140 (380)
T 2o4c_A 88 ---PG-CNA-----RGVVDYVLGCLLAMAE----VRGA--------------DLAERTYGVVGAGQVGGRLVEVLRGLGW 140 (380)
T ss_dssp ---TT-TTH-----HHHHHHHHHHHHHHHH----HHTC--------------CGGGCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred ---CC-cCh-----HHHHHHHHHHHHHHHh----hhhc--------------ccCCCEEEEEeCCHHHHHHHHHHHHCCC
Confidence 10 011 233333333332 211 1211 234455665 888888999999998
Q ss_pred C--CCCCCCCCccccCCeeeeehhhhcccCcEEEEccC--------CCCccCHhHHhcCCCCcEEEccCCCCcccccccc
Q psy4626 284 N--KAGPFKPSYYSMDGFSVVKLNEVIRTVDIVVTATG--------NKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSL 353 (542)
Q Consensus 284 ~--e~~p~~a~ea~mdG~~v~~~~~a~~~~d~~~t~tg--------~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~~~l 353 (542)
. -.||..... -.|....+++|+++++|||++.+- ++++|+.+.|+.||+|++++|+|++.+ +|-.+|
T Consensus 141 ~V~~~d~~~~~~--~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~v-vd~~aL 217 (380)
T 2o4c_A 141 KVLVCDPPRQAR--EPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAV-VDNQAL 217 (380)
T ss_dssp EEEEECHHHHHH--STTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGG-BCHHHH
T ss_pred EEEEEcCChhhh--ccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcc-cCHHHH
Confidence 4 335443221 245566789999999999999542 889999999999999999999999876 343333
No 119
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=98.43 E-value=1.1e-06 Score=91.12 Aligned_cols=103 Identities=21% Similarity=0.229 Sum_probs=80.4
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCce-eeCH-------HHHh--
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFS-VVKL-------NEVI-- 130 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~-v~~l-------~e~l-- 130 (542)
..|+++.+.. ...+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...+...|++ +++. .+.+
T Consensus 177 ta~~~l~~~~-~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~ 255 (373)
T 2fzw_A 177 TGYGAAVNTA-KLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIE 255 (373)
T ss_dssp HHHHHHHTTT-CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHH
T ss_pred HHHHHHHhhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHH
Confidence 3455554332 24579999999999999999999999999 899999999988877777865 3332 2222
Q ss_pred ---cCCcEEEEcCCCcccCCHHHHhccCCC-eEEEeccCC
Q psy4626 131 ---RTVDIVVTATGNKNVVTREHMDKMKNG-CVVCNMGHS 166 (542)
Q Consensus 131 ---~~aDvVi~atG~~~lI~~e~l~~mk~G-ailvnvG~g 166 (542)
.++|++|+++|....+ .+.++.++++ +.++.+|..
T Consensus 256 ~~~~g~D~vid~~g~~~~~-~~~~~~l~~~~G~iv~~G~~ 294 (373)
T 2fzw_A 256 MTDGGVDYSFECIGNVKVM-RAALEACHKGWGVSVVVGVA 294 (373)
T ss_dssp HTTSCBSEEEECSCCHHHH-HHHHHTBCTTTCEEEECSCC
T ss_pred HhCCCCCEEEECCCcHHHH-HHHHHhhccCCcEEEEEecC
Confidence 2689999999976666 4789999999 999999865
No 120
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.43 E-value=8.4e-07 Score=89.50 Aligned_cols=91 Identities=27% Similarity=0.431 Sum_probs=75.2
Q ss_pred HHHHHHHHHHhhcCccccCcEEEEEcCCh-hHHHHHHHHHhC--CCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcE
Q psy4626 59 CRESIIDSLKRSTDVMFGGKQVVLCGYGE-VGKGCCQSLKGL--GCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDI 135 (542)
Q Consensus 59 ~~~s~~~ai~r~~~~~l~GktVvViG~G~-IG~~vA~~l~~~--Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDv 135 (542)
+-.++++.+.+. +..+.|++++|+|.|. +|+.+|+.|... |++|+++++.. .++.+.++.||+
T Consensus 141 Tp~gi~~ll~~~-~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t-------------~~L~~~~~~ADI 206 (281)
T 2c2x_A 141 TPRGIVHLLRRY-DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT-------------RDLPALTRQADI 206 (281)
T ss_dssp HHHHHHHHHHHT-TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC-------------SCHHHHHTTCSE
T ss_pred hHHHHHHHHHHc-CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch-------------hHHHHHHhhCCE
Confidence 345555555444 5689999999999997 599999999999 89999997432 467788899999
Q ss_pred EEEcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 136 VVTATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 136 Vi~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
||.++|.+++|+++. +|+|++++++|..
T Consensus 207 VI~Avg~p~~I~~~~---vk~GavVIDVgi~ 234 (281)
T 2c2x_A 207 VVAAVGVAHLLTADM---VRPGAAVIDVGVS 234 (281)
T ss_dssp EEECSCCTTCBCGGG---SCTTCEEEECCEE
T ss_pred EEECCCCCcccCHHH---cCCCcEEEEccCC
Confidence 999999999998655 6999999999965
No 121
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=98.42 E-value=5.4e-07 Score=92.46 Aligned_cols=106 Identities=15% Similarity=0.175 Sum_probs=84.2
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhC-CCEEEEEeCCchhhhhhhcCCce-eeC----HHH----Hh
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGL-GCVIYITEIDPICALQACMDGFS-VVK----LNE----VI 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~-Ga~Viv~d~dp~r~~~A~~~G~~-v~~----l~e----~l 130 (542)
...|+++.+......+|++|+|+|.|.+|+.+++.++.+ |++|++++.++.+...+...|++ +++ ..+ ..
T Consensus 156 ~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t 235 (345)
T 3jv7_A 156 LTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELT 235 (345)
T ss_dssp HHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHh
Confidence 345677766422346899999999999999999999998 67999999999998888888876 322 212 12
Q ss_pred --cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC
Q psy4626 131 --RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 131 --~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
.++|++++++|....+. +.++.+++++.++.+|...
T Consensus 236 ~g~g~d~v~d~~G~~~~~~-~~~~~l~~~G~iv~~G~~~ 273 (345)
T 3jv7_A 236 GGQGATAVFDFVGAQSTID-TAQQVVAVDGHISVVGIHA 273 (345)
T ss_dssp GGGCEEEEEESSCCHHHHH-HHHHHEEEEEEEEECSCCT
T ss_pred CCCCCeEEEECCCCHHHHH-HHHHHHhcCCEEEEECCCC
Confidence 37999999999876664 7899999999999998653
No 122
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=98.42 E-value=2.8e-07 Score=94.96 Aligned_cols=102 Identities=22% Similarity=0.261 Sum_probs=82.2
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCce-eeCH-----HHH----h
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFS-VVKL-----NEV----I 130 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~-v~~l-----~e~----l 130 (542)
..|+++.++ ...+|++|+|+|.|.||..+++.++.+|+ +|++++.++.|...+...|++ +++. .+. .
T Consensus 154 ta~~al~~~--~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t 231 (352)
T 3fpc_A 154 TGFHGAELA--NIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKAT 231 (352)
T ss_dssp HHHHHHHHT--TCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHT
T ss_pred HHHHHHHhc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHc
Confidence 346666544 34579999999999999999999999999 899999999888888888875 3332 122 1
Q ss_pred --cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 131 --RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 131 --~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
.++|++++++|....+. +.++.+++++.++.+|..
T Consensus 232 ~g~g~D~v~d~~g~~~~~~-~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 232 DGKGVDKVVIAGGDVHTFA-QAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp TTCCEEEEEECSSCTTHHH-HHHHHEEEEEEEEECCCC
T ss_pred CCCCCCEEEECCCChHHHH-HHHHHHhcCCEEEEeccc
Confidence 26999999999876664 789999999999999965
No 123
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.41 E-value=1.7e-07 Score=96.79 Aligned_cols=183 Identities=9% Similarity=0.150 Sum_probs=115.7
Q ss_pred HhcCCcEEEEcCCCcccCCHHHH-hccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 129 VIRTVDIVVTATGNKNVVTREHM-DKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 129 ~l~~aDvVi~atG~~~lI~~e~l-~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
.+.++|+++.. .. . + ++.| +.+++-..+...|.|-+.+|++++.++++.+.....
T Consensus 37 ~~~~ad~l~~~-~~-~-~-~~~l~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~~g-------------------- 92 (324)
T 3evt_A 37 DYDQIEVMYGN-HP-L-L-KTILARPTNQLKFVQVISAGVDYLPLKALQAAGVVVANTSG-------------------- 92 (324)
T ss_dssp TGGGEEEEESC-CT-H-H-HHHHHSTTCCCCEEECSSSCCTTSCHHHHHHTTCEEECCTT--------------------
T ss_pred HhCCcEEEEEC-Cc-C-h-HHHHHhhCCCceEEEECCccccccCHHHHHHCCcEEEECCC--------------------
Confidence 45678987632 22 2 4 6778 678888899999999778999988765554433211
Q ss_pred cccccCCCChhHHHh------hHHHHHHHHH-HHHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHH
Q psy4626 208 LVNLSCSSLPSFVVS------ITACTQALAL-IELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDE 276 (542)
Q Consensus 208 Lvnl~~~thp~~vmd------~sfa~q~la~-~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~ 276 (542)
. +...+-+ ++++.++... ...... ++|.+.. + .-++..+++|+ .|++..++
T Consensus 93 -~------~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~--~~W~~~~---~------~~~l~gktvGIiGlG~IG~~vA~ 154 (324)
T 3evt_A 93 -I------HADAISESVLAAMLSVVRGYHAAWLNQRGA--RQWALPM---T------TSTLTGQQLLIYGTGQIGQSLAA 154 (324)
T ss_dssp -H------HHHHHHHHHHHHHHHHHTTHHHHHHHHTTT--CCSSCSS---C------CCCSTTCEEEEECCSHHHHHHHH
T ss_pred -c------CchHHHHHHHHHHHHHHhChhHHHHHHHhc--CCcccCC---C------CccccCCeEEEECcCHHHHHHHH
Confidence 0 0111111 1222221111 111121 5676532 0 01345567776 88999999
Q ss_pred HHhhcCCCCC--CCC-CCCccccCCeeeeehhhhcccCcEEEEc----cCCCCccCHhHHhcCCCCcEEEccCCCCcccc
Q psy4626 277 QAKYMGLNKA--GPF-KPSYYSMDGFSVVKLNEVIRTVDIVVTA----TGNKNVVTREHMDKMKNGCVVCNMGHSNTEID 349 (542)
Q Consensus 277 ~a~~lg~~e~--~p~-~a~ea~mdG~~v~~~~~a~~~~d~~~t~----tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei~ 349 (542)
+++++|+... ||. +..+..-+++...+++|+++++|+|+++ ..++++|+.+.|+.||+|++++|+|++.. +|
T Consensus 155 ~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~-vd 233 (324)
T 3evt_A 155 KASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPA-VD 233 (324)
T ss_dssp HHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGG-BC
T ss_pred HHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChh-hh
Confidence 9999999422 222 2223333445556889999999999993 46789999999999999999999999987 34
Q ss_pred ccccc
Q psy4626 350 VNSLR 354 (542)
Q Consensus 350 ~~~l~ 354 (542)
-++|.
T Consensus 234 ~~aL~ 238 (324)
T 3evt_A 234 TTALM 238 (324)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 124
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=98.41 E-value=5.4e-07 Score=93.13 Aligned_cols=111 Identities=14% Similarity=0.110 Sum_probs=83.4
Q ss_pred HHHHHHHhhcCccccC------cEEEEEcCChhHHHH-HHHH-HhCCCE-EEEEeCCch---hhhhhhcCCceeeCH---
Q psy4626 62 SIIDSLKRSTDVMFGG------KQVVLCGYGEVGKGC-CQSL-KGLGCV-IYITEIDPI---CALQACMDGFSVVKL--- 126 (542)
Q Consensus 62 s~~~ai~r~~~~~l~G------ktVvViG~G~IG~~v-A~~l-~~~Ga~-Viv~d~dp~---r~~~A~~~G~~v~~l--- 126 (542)
..++++.++ ...+| ++|+|+|.|.||..+ ++.+ +.+|++ |++++.++. +...+...|++.++.
T Consensus 154 ta~~al~~~--~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~ 231 (357)
T 2b5w_A 154 ITEKALEHA--YASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQT 231 (357)
T ss_dssp HHHHHHHHH--HHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTS
T ss_pred HHHHHHHhc--CCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCcc
Confidence 345565443 23467 999999999999999 9999 999996 999999888 887788888764332
Q ss_pred --HHHh---cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC---cccChHhh
Q psy4626 127 --NEVI---RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN---TEIDVNSL 175 (542)
Q Consensus 127 --~e~l---~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~---~eid~~aL 175 (542)
.++. .++|+||+++|....+ .+.++.+++++.++.+|... .+++...+
T Consensus 232 ~~~~i~~~~gg~Dvvid~~g~~~~~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~ 287 (357)
T 2b5w_A 232 PVEDVPDVYEQMDFIYEATGFPKHA-IQSVQALAPNGVGALLGVPSDWAFEVDAGAF 287 (357)
T ss_dssp CGGGHHHHSCCEEEEEECSCCHHHH-HHHHHHEEEEEEEEECCCCCCCCCCCCHHHH
T ss_pred CHHHHHHhCCCCCEEEECCCChHHH-HHHHHHHhcCCEEEEEeCCCCCCceecHHHH
Confidence 1211 1589999999986556 37899999999999998654 24454444
No 125
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.41 E-value=9e-07 Score=96.95 Aligned_cols=186 Identities=14% Similarity=0.218 Sum_probs=121.5
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.+.++|+++....+ -++++.++.+++-.++...|.|-+.+|+++...+++.+....
T Consensus 40 ~~~~~~d~li~~~~~--~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gi~v~n~p--------------------- 96 (529)
T 1ygy_A 40 AAVPEADALLVRSAT--TVDAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAP--------------------- 96 (529)
T ss_dssp HHGGGCSEEEECSSS--CBCHHHHHTCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCT---------------------
T ss_pred HHhcCCEEEEEcCCC--CCCHHHHhhCCCCcEEEECCcCcCccCHhHHHhCCeEEEECC---------------------
Confidence 346899999876444 367888998888888989999988899888775544333221
Q ss_pred cccccCCCChhHHHh------hHHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHH
Q psy4626 208 LVNLSCSSLPSFVVS------ITACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQ 277 (542)
Q Consensus 208 Lvnl~~~thp~~vmd------~sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~ 277 (542)
. .+...+-. ++++.++-......++ ++|...-+ .+. ++..+++|+ .|++..+.+
T Consensus 97 -----~-~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~--g~w~~~~~-~~~-------~l~g~~vgIIG~G~IG~~vA~~ 160 (529)
T 1ygy_A 97 -----T-SNIHSAAEHALALLLAASRQIPAADASLRE--HTWKRSSF-SGT-------EIFGKTVGVVGLGRIGQLVAQR 160 (529)
T ss_dssp -----T-SSHHHHHHHHHHHHHHHHTTHHHHHHHHHT--TCCCGGGC-CBC-------CCTTCEEEEECCSHHHHHHHHH
T ss_pred -----C-cchHHHHHHHHHHHHHHHhhhHHHHHHHHh--CCCcccCc-Ccc-------ccCCCEEEEEeeCHHHHHHHHH
Confidence 0 01111111 1222222211222222 56754211 111 234455665 788888899
Q ss_pred HhhcCCC--CCCCCCCC-ccccCCeeeeehhhhcccCcEEEEcc----CCCCccCHhHHhcCCCCcEEEccCCCCccccc
Q psy4626 278 AKYMGLN--KAGPFKPS-YYSMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGHSNTEIDV 350 (542)
Q Consensus 278 a~~lg~~--e~~p~~a~-ea~mdG~~v~~~~~a~~~~d~~~t~t----g~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~ 350 (542)
++.+|+. -.||.... +|...|+...+++++++++|+|++++ .++++|+.+.++.||+|++++|+|++.. +|-
T Consensus 161 l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~i-v~~ 239 (529)
T 1ygy_A 161 IAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGL-VDE 239 (529)
T ss_dssp HHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTS-BCH
T ss_pred HHhCCCEEEEECCCCChhHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCch-hhH
Confidence 9988873 33555432 24456888888999999999999965 7889999999999999999999999887 454
Q ss_pred ccc
Q psy4626 351 NSL 353 (542)
Q Consensus 351 ~~l 353 (542)
.+|
T Consensus 240 ~aL 242 (529)
T 1ygy_A 240 AAL 242 (529)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 126
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=98.41 E-value=1.4e-06 Score=88.87 Aligned_cols=119 Identities=17% Similarity=0.164 Sum_probs=87.6
Q ss_pred HHHHHHHHhhcCccccCcEEEEEc-CChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeC-----HHHH----
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCG-YGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVK-----LNEV---- 129 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG-~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~-----l~e~---- 129 (542)
-..|+++.+.. ...+|++|+|+| .|.||+.+++.++.+|++|+++++++.+...+...|.+ +++ ..+.
T Consensus 134 ~ta~~~l~~~~-~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~ 212 (334)
T 3qwb_A 134 LTALSFTNEAY-HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKF 212 (334)
T ss_dssp HHHHHHHHTTS-CCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHHhc-cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHH
Confidence 34455655442 245899999999 79999999999999999999999999888888888875 322 1121
Q ss_pred h--cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC---cccChHhhcCCCcce
Q psy4626 130 I--RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN---TEIDVNSLRTPDLTW 182 (542)
Q Consensus 130 l--~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~---~eid~~aL~~~~l~v 182 (542)
. .+.|++++++|. ..+ ...++.+++++.++.+|... ..++...+..+++++
T Consensus 213 ~~~~g~D~vid~~g~-~~~-~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 268 (334)
T 3qwb_A 213 TNGKGVDASFDSVGK-DTF-EISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITL 268 (334)
T ss_dssp TTTSCEEEEEECCGG-GGH-HHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEE
T ss_pred hCCCCceEEEECCCh-HHH-HHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEE
Confidence 1 368999999987 344 47899999999999998753 244555554444433
No 127
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=98.40 E-value=5.2e-07 Score=93.58 Aligned_cols=97 Identities=13% Similarity=0.207 Sum_probs=76.1
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCc---hhhhhhhcCCceeeC---HHHHh----cCCcEEEEcCCCcccC
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDP---ICALQACMDGFSVVK---LNEVI----RTVDIVVTATGNKNVV 146 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp---~r~~~A~~~G~~v~~---l~e~l----~~aDvVi~atG~~~lI 146 (542)
|++|+|+|.|.||+.+++.++.+|++|+++++++ .+...+...|++.++ +.+.+ .++|++|+++|....+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 260 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGADVNI 260 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCCTHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCChHHH
Confidence 9999999999999999999999999999999988 777666667765432 11111 4689999999976554
Q ss_pred -CHHHHhccCCCeEEEeccCCC---cccChHh
Q psy4626 147 -TREHMDKMKNGCVVCNMGHSN---TEIDVNS 174 (542)
Q Consensus 147 -~~e~l~~mk~GailvnvG~g~---~eid~~a 174 (542)
. +.++.|++++.++++|... .+++...
T Consensus 261 ~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~ 291 (366)
T 2cdc_A 261 LG-NVIPLLGRNGVLGLFGFSTSGSVPLDYKT 291 (366)
T ss_dssp HH-HHGGGEEEEEEEEECSCCCSCEEEEEHHH
T ss_pred HH-HHHHHHhcCCEEEEEecCCCCccccChhh
Confidence 4 6889999999999998753 3445444
No 128
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=98.40 E-value=1.3e-06 Score=90.78 Aligned_cols=120 Identities=15% Similarity=0.166 Sum_probs=88.4
Q ss_pred HHHHHHHhhcCcc----ccCcEEEEEc-CChhHHHHHHHHHh-CCCEEEEEeCCchhhhhhhcCCce-eeC----HHHHh
Q psy4626 62 SIIDSLKRSTDVM----FGGKQVVLCG-YGEVGKGCCQSLKG-LGCVIYITEIDPICALQACMDGFS-VVK----LNEVI 130 (542)
Q Consensus 62 s~~~ai~r~~~~~----l~GktVvViG-~G~IG~~vA~~l~~-~Ga~Viv~d~dp~r~~~A~~~G~~-v~~----l~e~l 130 (542)
..|+++.+..+.. ..|++|+|+| .|.+|+.+++.++. .|++|++++.++.+...+...|++ +++ ..+.+
T Consensus 153 ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v 232 (363)
T 4dvj_A 153 TAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEV 232 (363)
T ss_dssp HHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHH
T ss_pred HHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHH
Confidence 4456654433222 1799999999 89999999999998 589999999999888888888876 333 22222
Q ss_pred -----cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCccee
Q psy4626 131 -----RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWE 183 (542)
Q Consensus 131 -----~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~ 183 (542)
.++|++++|+|....+. +.++.+++++.++.+|. ...++...+..+++++.
T Consensus 233 ~~~~~~g~Dvvid~~g~~~~~~-~~~~~l~~~G~iv~~g~-~~~~~~~~~~~k~~~i~ 288 (363)
T 4dvj_A 233 AALGLGAPAFVFSTTHTDKHAA-EIADLIAPQGRFCLIDD-PSAFDIMLFKRKAVSIH 288 (363)
T ss_dssp HTTCSCCEEEEEECSCHHHHHH-HHHHHSCTTCEEEECSC-CSSCCGGGGTTTTCEEE
T ss_pred HHhcCCCceEEEECCCchhhHH-HHHHHhcCCCEEEEECC-CCccchHHHhhccceEE
Confidence 37999999999776664 78999999999999864 34556655555544443
No 129
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=98.40 E-value=6.4e-07 Score=93.25 Aligned_cols=104 Identities=23% Similarity=0.264 Sum_probs=82.6
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCce-eeCHH-------HHh-
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFS-VVKLN-------EVI- 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~-v~~l~-------e~l- 130 (542)
...|+++.+.. ...+|++|+|+|.|+||..+++.++.+|+ +|+++++++.|...+...|++ +++.. +.+
T Consensus 179 ~ta~~al~~~~-~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 179 PTGLGAVWNTA-KVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIV 257 (378)
T ss_dssp HHHHHHHHTTT-CCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHH
T ss_pred HHHHHHHHhhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHH
Confidence 34456654432 24579999999999999999999999999 899999999999888888875 33322 222
Q ss_pred ----cCCcEEEEcCCCcccCCHHHHhccCCC-eEEEeccCC
Q psy4626 131 ----RTVDIVVTATGNKNVVTREHMDKMKNG-CVVCNMGHS 166 (542)
Q Consensus 131 ----~~aDvVi~atG~~~lI~~e~l~~mk~G-ailvnvG~g 166 (542)
.++|++|+|+|....+. +.++.+++| +.++.+|..
T Consensus 258 ~~~~gg~D~vid~~g~~~~~~-~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 258 DLTDGGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp HHTTSCBSEEEECSCCHHHHH-HHHHTBCTTTCEEEECSCC
T ss_pred HhcCCCCCEEEECCCCHHHHH-HHHHHhhccCCEEEEEccc
Confidence 36999999999876764 789999996 999999964
No 130
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=98.39 E-value=5.2e-07 Score=92.63 Aligned_cols=118 Identities=19% Similarity=0.302 Sum_probs=85.8
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCce-eeC-----HHHHh----
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFS-VVK-----LNEVI---- 130 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~-v~~-----l~e~l---- 130 (542)
..++++.+..+ . +|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+... .+ +++ +.+.+
T Consensus 152 ta~~~l~~~~~-~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~ 228 (343)
T 2dq4_A 152 NAVHTVYAGSG-V-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT 228 (343)
T ss_dssp HHHHHHHSTTC-C-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHH
T ss_pred HHHHHHHHhCC-C-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhc
Confidence 34667652323 3 89999999999999999999999999 999999998887666555 43 332 22222
Q ss_pred -cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC--cccCh-HhhcCCCccee
Q psy4626 131 -RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN--TEIDV-NSLRTPDLTWE 183 (542)
Q Consensus 131 -~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~--~eid~-~aL~~~~l~v~ 183 (542)
.++|++|+++|....+ .+.++.|++++.++.+|... ..++. ..+..+++++.
T Consensus 229 ~~g~D~vid~~g~~~~~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~ 284 (343)
T 2dq4_A 229 GSGVEVLLEFSGNEAAI-HQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAF 284 (343)
T ss_dssp SSCEEEEEECSCCHHHH-HHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEE
T ss_pred CCCCCEEEECCCCHHHH-HHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEE
Confidence 3689999999986566 47899999999999998753 34555 44444444443
No 131
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=98.38 E-value=7.3e-07 Score=90.70 Aligned_cols=102 Identities=18% Similarity=0.181 Sum_probs=80.3
Q ss_pred HHHHHHHHhhcCccccCcEEEEEc-CChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeC------HHHHhcC
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCG-YGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVK------LNEVIRT 132 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG-~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~------l~e~l~~ 132 (542)
...|+++.++ ...+|++|+|+| .|.+|+.+++.++.+|++|+++. ++.+...+...|++ +++ ..+.+.+
T Consensus 139 ~ta~~al~~~--~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g 215 (321)
T 3tqh_A 139 LTALQALNQA--EVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAISTP 215 (321)
T ss_dssp HHHHHHHHHT--TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCSEEEETTTSCHHHHCCSC
T ss_pred HHHHHHHHhc--CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCCEEEeCCCcchhhhhccC
Confidence 3456777443 346899999997 89999999999999999999987 45566667777875 332 3344578
Q ss_pred CcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC
Q psy4626 133 VDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 133 aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
+|++++|+|.... .+.++.+++++.++.+|...
T Consensus 216 ~D~v~d~~g~~~~--~~~~~~l~~~G~iv~~g~~~ 248 (321)
T 3tqh_A 216 VDAVIDLVGGDVG--IQSIDCLKETGCIVSVPTIT 248 (321)
T ss_dssp EEEEEESSCHHHH--HHHGGGEEEEEEEEECCSTT
T ss_pred CCEEEECCCcHHH--HHHHHhccCCCEEEEeCCCC
Confidence 9999999997654 57899999999999998654
No 132
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=98.38 E-value=9.9e-07 Score=90.67 Aligned_cols=119 Identities=13% Similarity=0.115 Sum_probs=86.8
Q ss_pred HHHHHHHhhcCccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeC------HHHHh---
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVK------LNEVI--- 130 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~------l~e~l--- 130 (542)
..|+++.+. ....|++|+|+|. |.||+.+++.++..|++|+++++++.+...+...|.. +.+ +.+.+
T Consensus 157 ta~~~l~~~--~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~ 234 (347)
T 2hcy_A 157 TVYKALKSA--NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKA 234 (347)
T ss_dssp HHHHHHHTT--TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHH
T ss_pred HHHHHHHhc--CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHH
Confidence 456676655 2457999999999 8999999999999999999999998887766666754 222 22222
Q ss_pred --cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC---cccChHhhcCCCccee
Q psy4626 131 --RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN---TEIDVNSLRTPDLTWE 183 (542)
Q Consensus 131 --~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~---~eid~~aL~~~~l~v~ 183 (542)
.+.|++|+++|....+ .+.++.|++++.++++|... ..++...+..+++++.
T Consensus 235 ~~~~~D~vi~~~g~~~~~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~ 291 (347)
T 2hcy_A 235 TDGGAHGVINVSVSEAAI-EASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIV 291 (347)
T ss_dssp HTSCEEEEEECSSCHHHH-HHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEE
T ss_pred hCCCCCEEEECCCcHHHH-HHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEE
Confidence 1689999999875555 47889999999999998754 2344444433444433
No 133
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=98.38 E-value=1.7e-06 Score=88.59 Aligned_cols=121 Identities=14% Similarity=0.123 Sum_probs=90.6
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhC-CCEEEEEeCCchhhhhhhcCCce-eeC-----HHH-H---
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGL-GCVIYITEIDPICALQACMDGFS-VVK-----LNE-V--- 129 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~-Ga~Viv~d~dp~r~~~A~~~G~~-v~~-----l~e-~--- 129 (542)
...|+++.++. ..+|++|+|+|.|.+|...++.++.. |++|++++.++.|...+...|++ +++ ..+ +
T Consensus 150 ~ta~~~l~~~~--~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~ 227 (348)
T 4eez_A 150 VTTYKAIKVSG--VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKI 227 (348)
T ss_dssp HHHHHHHHHHT--CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHH
T ss_pred eeEEeeecccC--CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhh
Confidence 34466665552 46899999999999999999999865 67999999999998888888875 322 222 2
Q ss_pred h--cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC--cccChHhhcCCCcceee
Q psy4626 130 I--RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN--TEIDVNSLRTPDLTWEK 184 (542)
Q Consensus 130 l--~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~--~eid~~aL~~~~l~v~~ 184 (542)
. .++|++++++|....+. ..++.+++++.++.+|... ..+++..+..+++++.+
T Consensus 228 t~g~g~d~~~~~~~~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g 285 (348)
T 4eez_A 228 TGGLGVQSAIVCAVARIAFE-QAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAG 285 (348)
T ss_dssp TTSSCEEEEEECCSCHHHHH-HHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEE
T ss_pred cCCCCceEEEEeccCcchhh-eeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEE
Confidence 1 36889999998877774 7899999999999998764 45666666555555544
No 134
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=98.38 E-value=1.2e-06 Score=89.99 Aligned_cols=104 Identities=16% Similarity=0.248 Sum_probs=76.9
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eC----HHHH----h
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VK----LNEV----I 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~----l~e~----l 130 (542)
...|+++.+.. ....|++|+|+|+ |.||+.+++.++.+|++|++++.++.+...+...|++. .+ ..+. .
T Consensus 145 ~ta~~~l~~~~-~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~ 223 (342)
T 4eye_A 145 HTMYFAYARRG-QLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREAT 223 (342)
T ss_dssp HHHHHHHHTTS-CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHT
T ss_pred HHHHHHHHHhc-CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHh
Confidence 34566664432 2457999999998 99999999999999999999999998887777777653 21 2222 2
Q ss_pred --cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC
Q psy4626 131 --RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 131 --~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
.+.|++|+|+|.. .+ .+.++.+++++.++.+|...
T Consensus 224 ~~~g~Dvvid~~g~~-~~-~~~~~~l~~~G~iv~~G~~~ 260 (342)
T 4eye_A 224 GGAGVDMVVDPIGGP-AF-DDAVRTLASEGRLLVVGFAA 260 (342)
T ss_dssp TTSCEEEEEESCC---CH-HHHHHTEEEEEEEEEC----
T ss_pred CCCCceEEEECCchh-HH-HHHHHhhcCCCEEEEEEccC
Confidence 2699999999875 34 47899999999999998653
No 135
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=98.37 E-value=4.4e-06 Score=87.81 Aligned_cols=106 Identities=20% Similarity=0.218 Sum_probs=85.1
Q ss_pred hcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCC----chhh---------hhhhcCCc--eeeCHHHHhcCC
Q psy4626 70 STDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEID----PICA---------LQACMDGF--SVVKLNEVIRTV 133 (542)
Q Consensus 70 ~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~d----p~r~---------~~A~~~G~--~v~~l~e~l~~a 133 (542)
..+..+...+|+|+|.|..|.++|+.+.++|+ +|+++|++ ..|. ..|..... ...++.++++++
T Consensus 185 i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~A 264 (388)
T 1vl6_A 185 LTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGA 264 (388)
T ss_dssp HHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTC
T ss_pred HhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccC
Confidence 34557889999999999999999999999999 89999987 4442 22322211 134688999999
Q ss_pred cEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhc
Q psy4626 134 DIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLR 176 (542)
Q Consensus 134 DvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~ 176 (542)
|++|.+++ +++++++.++.|+++.+++..+....|+..+...
T Consensus 265 DVlIG~Sa-p~l~t~emVk~Ma~~pIIfalSNPt~E~~p~~a~ 306 (388)
T 1vl6_A 265 DFFIGVSR-GNILKPEWIKKMSRKPVIFALANPVPEIDPELAR 306 (388)
T ss_dssp SEEEECSC-SSCSCHHHHTTSCSSCEEEECCSSSCSSCHHHHH
T ss_pred CEEEEeCC-CCccCHHHHHhcCCCCEEEEcCCCCCCCCHHHHH
Confidence 99999998 7999999999999999999988876677766554
No 136
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=98.36 E-value=5.3e-07 Score=91.39 Aligned_cols=102 Identities=14% Similarity=0.211 Sum_probs=76.0
Q ss_pred HHHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eC-HHHHhcCCcEEE
Q psy4626 60 RESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VK-LNEVIRTVDIVV 137 (542)
Q Consensus 60 ~~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~-l~e~l~~aDvVi 137 (542)
....|+++.++ ...+|++|+|.|.|.+|+.+++.++.+|++|++++ ++.+...+...|++. ++ .+++-.++|+++
T Consensus 128 ~~ta~~al~~~--~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~ 204 (315)
T 3goh_A 128 LLTAWQAFEKI--PLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKYFAIF 204 (315)
T ss_dssp HHHHHHHHTTS--CCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCEEEEE
T ss_pred HHHHHHHHhhc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCccEEE
Confidence 34557777333 34689999999999999999999999999999999 888888888888763 32 111225799999
Q ss_pred EcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 138 TATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 138 ~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
+|+|.... .+.++.+++++.++.+|..
T Consensus 205 d~~g~~~~--~~~~~~l~~~G~~v~~g~~ 231 (315)
T 3goh_A 205 DAVNSQNA--AALVPSLKANGHIICIQDR 231 (315)
T ss_dssp CC---------TTGGGEEEEEEEEEECCC
T ss_pred ECCCchhH--HHHHHHhcCCCEEEEEeCC
Confidence 99987654 3688999999999998753
No 137
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=98.32 E-value=1.8e-06 Score=89.41 Aligned_cols=119 Identities=16% Similarity=0.190 Sum_probs=86.0
Q ss_pred HHHHHHHHhh-cCccccCcEEEEEcCChhHHHHHHHHHhC-CCEEEEEeCCchhhhhhhcCCce-eeCH----HHH----
Q psy4626 61 ESIIDSLKRS-TDVMFGGKQVVLCGYGEVGKGCCQSLKGL-GCVIYITEIDPICALQACMDGFS-VVKL----NEV---- 129 (542)
Q Consensus 61 ~s~~~ai~r~-~~~~l~GktVvViG~G~IG~~vA~~l~~~-Ga~Viv~d~dp~r~~~A~~~G~~-v~~l----~e~---- 129 (542)
...++++.+. . ...+|++|+|+|.|.+|+.+++.++.+ |++|++++.++.+...+...|++ +++. .+.
T Consensus 171 ~ta~~al~~~~~-~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~v~~~ 249 (359)
T 1h2b_A 171 ITAYRAVKKAAR-TLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMEL 249 (359)
T ss_dssp HHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHH
T ss_pred HHHHHHHHhhcc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccchHHHHHHHH
Confidence 4457777662 2 245799999999999999999999999 99999999999888888888875 3332 121
Q ss_pred h--cCCcEEEEcCCCcc--cCCHHHHhccCCCeEEEeccCCCc-ccChHhhcCCCccee
Q psy4626 130 I--RTVDIVVTATGNKN--VVTREHMDKMKNGCVVCNMGHSNT-EIDVNSLRTPDLTWE 183 (542)
Q Consensus 130 l--~~aDvVi~atG~~~--lI~~e~l~~mk~GailvnvG~g~~-eid~~aL~~~~l~v~ 183 (542)
. .++|++|+++|... .+. +.++. +++.++.+|.... +++...+..+++++.
T Consensus 250 ~~g~g~Dvvid~~G~~~~~~~~-~~~~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~i~ 305 (359)
T 1h2b_A 250 TRGRGVNVAMDFVGSQATVDYT-PYLLG--RMGRLIIVGYGGELRFPTIRVISSEVSFE 305 (359)
T ss_dssp TTTCCEEEEEESSCCHHHHHHG-GGGEE--EEEEEEECCCSSCCCCCHHHHHHTTCEEE
T ss_pred hCCCCCcEEEECCCCchHHHHH-HHhhc--CCCEEEEEeCCCCCCCCHHHHHhCCcEEE
Confidence 1 26899999999875 554 56666 8889998886532 455544443444433
No 138
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=98.30 E-value=1.4e-06 Score=89.60 Aligned_cols=113 Identities=13% Similarity=0.185 Sum_probs=84.7
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCC-hhHHHHHHHHHhC-CCEEEEEeCCchhhhhhhcCCce-eeCH---------HH
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYG-EVGKGCCQSLKGL-GCVIYITEIDPICALQACMDGFS-VVKL---------NE 128 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G-~IG~~vA~~l~~~-Ga~Viv~d~dp~r~~~A~~~G~~-v~~l---------~e 128 (542)
...|+++.++ ....|++|+|+|.| .||+.+++.++.. |++|+++++++.+...+...|.+ +++. .+
T Consensus 157 ~ta~~~l~~~--~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 234 (347)
T 1jvb_A 157 ITTYRAVRKA--SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRR 234 (347)
T ss_dssp HHHHHHHHHT--TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHH
T ss_pred HHHHHHHHhc--CCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHH
Confidence 4457777654 34589999999999 9999999999999 99999999999887766666654 2221 12
Q ss_pred Hh--cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC-c-ccChHhhc
Q psy4626 129 VI--RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN-T-EIDVNSLR 176 (542)
Q Consensus 129 ~l--~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~-~-eid~~aL~ 176 (542)
.. .+.|++|+++|....+. +.++.+++++.++.+|... . +++...+.
T Consensus 235 ~~~~~~~d~vi~~~g~~~~~~-~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~ 285 (347)
T 1jvb_A 235 ITESKGVDAVIDLNNSEKTLS-VYPKALAKQGKYVMVGLFGADLHYHAPLIT 285 (347)
T ss_dssp HTTTSCEEEEEESCCCHHHHT-TGGGGEEEEEEEEECCSSCCCCCCCHHHHH
T ss_pred HhcCCCceEEEECCCCHHHHH-HHHHHHhcCCEEEEECCCCCCCCCCHHHHH
Confidence 22 36899999999865664 6789999999999998653 2 44544443
No 139
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=98.30 E-value=1.7e-06 Score=88.51 Aligned_cols=92 Identities=22% Similarity=0.278 Sum_probs=75.2
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcccCCH-----H
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKNVVTR-----E 149 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~~-----e 149 (542)
..++|+|||+|.+|..+|+.|...|.+|+++|+++.+.......|... .+++++++++|+||.|+.+...+.. +
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~ 109 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQG 109 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTC
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchh
Confidence 457999999999999999999999999999999998877666667764 5788899999999999875433321 2
Q ss_pred HHhccCCCeEEEeccCCC
Q psy4626 150 HMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 150 ~l~~mk~GailvnvG~g~ 167 (542)
.++.+++|.++++++...
T Consensus 110 ~~~~l~~~~~vi~~st~~ 127 (320)
T 4dll_A 110 VAAAMKPGSLFLDMASIT 127 (320)
T ss_dssp HHHHCCTTCEEEECSCCC
T ss_pred HHhhCCCCCEEEecCCCC
Confidence 344689999999998764
No 140
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=98.30 E-value=2.6e-06 Score=90.68 Aligned_cols=123 Identities=20% Similarity=0.136 Sum_probs=88.8
Q ss_pred HHHHHHHHhh-cCccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCHH----------
Q psy4626 61 ESIIDSLKRS-TDVMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKLN---------- 127 (542)
Q Consensus 61 ~s~~~ai~r~-~~~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l~---------- 127 (542)
...|+++.+. .....+|++|+|+|. |.||+.+++.++.+|++|++++.++.+...+...|++ +++..
T Consensus 204 ~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~ 283 (447)
T 4a0s_A 204 GTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIAD 283 (447)
T ss_dssp HHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGG
T ss_pred HHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccc
Confidence 3456666421 123468999999998 9999999999999999999999999888888888875 23211
Q ss_pred -------------HH----h-cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC---cccChHhhcCCCcceeee
Q psy4626 128 -------------EV----I-RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN---TEIDVNSLRTPDLTWEKV 185 (542)
Q Consensus 128 -------------e~----l-~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~---~eid~~aL~~~~l~v~~~ 185 (542)
+. . .+.|++|+++|.. .+ ...+..+++++.++++|... ..++...+..+.+++.+.
T Consensus 284 ~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~-~~-~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~ 360 (447)
T 4a0s_A 284 DPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV-TF-GLSVIVARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGS 360 (447)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHH-HH-HHHHHHSCTTCEEEESCCTTCSEEEEEHHHHHHTTCEEEEC
T ss_pred cccccchhhhHHHHHHHHHhCCCceEEEECCCch-HH-HHHHHHHhcCCEEEEEecCCCcccccCHHHHHhCCCEEEec
Confidence 11 1 3699999999974 44 46889999999999999653 345555554444444443
No 141
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=98.29 E-value=2.1e-06 Score=88.62 Aligned_cols=120 Identities=16% Similarity=0.227 Sum_probs=87.2
Q ss_pred HHHHHHHHhhcCccccCcEEEEE-cCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeC-----HHHHh---
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLC-GYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVK-----LNEVI--- 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvVi-G~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~-----l~e~l--- 130 (542)
...|+++.+.. ...+|++|+|+ |.|.||+.+++.++..|++|+++++++.+...+...|++ +++ ..+.+
T Consensus 153 ~ta~~~l~~~~-~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~ 231 (353)
T 4dup_A 153 FTVWANLFQMA-GLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAE 231 (353)
T ss_dssp HHHHHHHTTTT-CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHH
Confidence 34566664332 24589999999 679999999999999999999999999988877777765 222 22222
Q ss_pred --cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCc---c-cChHhhcCCCccee
Q psy4626 131 --RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNT---E-IDVNSLRTPDLTWE 183 (542)
Q Consensus 131 --~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~---e-id~~aL~~~~l~v~ 183 (542)
.+.|++|+|+|.. .+ ...++.+++++.++.+|.... + +++..+..+++++.
T Consensus 232 ~~~g~Dvvid~~g~~-~~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~ 288 (353)
T 4dup_A 232 TGQGVDIILDMIGAA-YF-ERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVT 288 (353)
T ss_dssp HSSCEEEEEESCCGG-GH-HHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEE
T ss_pred hCCCceEEEECCCHH-HH-HHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEE
Confidence 3699999999875 34 468999999999999986531 2 55555544444443
No 142
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=98.29 E-value=1.9e-06 Score=87.75 Aligned_cols=113 Identities=19% Similarity=0.254 Sum_probs=84.5
Q ss_pred HHHHHHHHhhcCccccCcEEEEEc-CChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeC-----HHHH----
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCG-YGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVK-----LNEV---- 129 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG-~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~-----l~e~---- 129 (542)
.+.+.++.+.. ...+|++|+|+| .|.||+.+++.++..|++|+++++++.+...+...|++ +++ ..+.
T Consensus 126 ~ta~~~l~~~~-~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~ 204 (325)
T 3jyn_A 126 LTVQYLLRQTY-QVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLEL 204 (325)
T ss_dssp HHHHHHHHTTS-CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHH
Confidence 44555655433 245799999999 79999999999999999999999999888877777764 322 2222
Q ss_pred h--cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCc---ccChHhhc
Q psy4626 130 I--RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNT---EIDVNSLR 176 (542)
Q Consensus 130 l--~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~---eid~~aL~ 176 (542)
. .+.|++++++|. ..+ ...++.+++++.++.+|.... .++...+.
T Consensus 205 ~~~~g~Dvvid~~g~-~~~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~ 254 (325)
T 3jyn_A 205 TDGKKCPVVYDGVGQ-DTW-LTSLDSVAPRGLVVSFGNASGPVSGVNLGILA 254 (325)
T ss_dssp TTTCCEEEEEESSCG-GGH-HHHHTTEEEEEEEEECCCTTCCCCSCCTHHHH
T ss_pred hCCCCceEEEECCCh-HHH-HHHHHHhcCCCEEEEEecCCCCCCCCCHHHHh
Confidence 1 379999999987 445 478999999999999997532 34444443
No 143
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=98.29 E-value=2e-06 Score=86.12 Aligned_cols=90 Identities=16% Similarity=0.238 Sum_probs=73.2
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcccCC------HHH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKNVVT------REH 150 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~------~e~ 150 (542)
++|+|||+|.+|..+|+.|...|.+|+++|+++.+.......|... .++++++.++|+||.|+.+...+. .+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 5899999999999999999999999999999998877666667764 478888999999999987543332 123
Q ss_pred HhccCCCeEEEeccCCC
Q psy4626 151 MDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 151 l~~mk~GailvnvG~g~ 167 (542)
.+.+++|.++++++...
T Consensus 82 ~~~l~~~~~vi~~st~~ 98 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVD 98 (287)
T ss_dssp HHHCCTTCEEEECSCCC
T ss_pred hhcCCCCCEEEeCCCCC
Confidence 35689999999998654
No 144
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=98.28 E-value=2.4e-06 Score=87.72 Aligned_cols=120 Identities=17% Similarity=0.089 Sum_probs=86.5
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCH-----HHH----
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKL-----NEV---- 129 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l-----~e~---- 129 (542)
...|+++.+..+ ...|++|+|+|. |.+|+.+++.++.+|++|+++++++.+...+...|.+ +++. .+.
T Consensus 152 ~ta~~al~~~~~-~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~ 230 (343)
T 2eih_A 152 LTAWQMVVDKLG-VRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRL 230 (343)
T ss_dssp HHHHHHHTTTSC-CCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHH
T ss_pred HHHHHHHHHhcC-CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHH
Confidence 345667655322 357999999999 9999999999999999999999998887766666654 2221 121
Q ss_pred h--cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCc---ccChHhhcCCCccee
Q psy4626 130 I--RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNT---EIDVNSLRTPDLTWE 183 (542)
Q Consensus 130 l--~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~---eid~~aL~~~~l~v~ 183 (542)
. .+.|++|+++| ...+ ...++.|++++.++.+|.... .++...+..+++++.
T Consensus 231 ~~~~~~d~vi~~~g-~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 287 (343)
T 2eih_A 231 TGGKGADKVVDHTG-ALYF-EGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSIL 287 (343)
T ss_dssp TTTTCEEEEEESSC-SSSH-HHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEE
T ss_pred hCCCCceEEEECCC-HHHH-HHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEE
Confidence 2 26899999999 4455 478999999999999987532 345444443444443
No 145
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.28 E-value=1.6e-06 Score=89.12 Aligned_cols=188 Identities=10% Similarity=0.143 Sum_probs=117.0
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCC-CeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKN-GCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEG 206 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~-GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~G 206 (542)
+.++++|+++....+ -++++.++.+++ -..+...|.|-+.+|++++.++++.+....
T Consensus 40 ~~~~~~d~~i~~~~~--~~~~~~l~~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~p-------------------- 97 (320)
T 1gdh_A 40 ETAKSVDALLITLNE--KCRKEVIDRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAP-------------------- 97 (320)
T ss_dssp HHHTTCSEEEEETTS--CBCHHHHHHSCTTCCEEEEESSCCTTBCHHHHHHTTCEEECCC--------------------
T ss_pred HHhcCCEEEEECCCC--CCCHHHHHhCCccceEEEECCcccccccHHHHHhCCcEEEEcC--------------------
Confidence 456889999865322 367788999988 677888898888899988875544433221
Q ss_pred CcccccCCCChhHHHhhH------HHHHHHHHHHHhcCCCCCCCCcc--ccCChhhHHHHHHhcCCcccc----cccccc
Q psy4626 207 RLVNLSCSSLPSFVVSIT------ACTQALALIELFNAPSGRYKSDV--YLLPKKMDEYVASLHLPTFDA----HLTELS 274 (542)
Q Consensus 207 rLvnl~~~thp~~vmd~s------fa~q~la~~~L~~~~~~~~~~gv--~~lp~~~d~~VA~l~L~~lg~----~i~~lt 274 (542)
.. ++..+-+.. ++.++-......+. +.|...- ...+. ++..+++|+ .|++..
T Consensus 98 ------~~-~~~~vAE~~~~l~L~~~R~~~~~~~~~~~--g~w~~~~~~~~~~~-------~l~g~~vgIIG~G~IG~~~ 161 (320)
T 1gdh_A 98 ------HG-VTVATAEIAMLLLLGSARRAGEGEKMIRT--RSWPGWEPLELVGE-------KLDNKTLGIYGFGSIGQAL 161 (320)
T ss_dssp ------CS-CHHHHHHHHHHHHHHHHTTHHHHHHHHHT--TCCCCCCTTTTCBC-------CCTTCEEEEECCSHHHHHH
T ss_pred ------CC-CHHHHHHHHHHHHHHHHccHHHHHHHHHc--CCCCccccccccCc-------CCCCCEEEEECcCHHHHHH
Confidence 00 111111111 11111111122222 4664210 00011 334456666 888888
Q ss_pred HHHHhhcCCC--CCCC-CCC-CccccCCeeee-ehhhhcccCcEEEEcc----CCCCccCHhHHhcCCCCcEEEccCCCC
Q psy4626 275 DEQAKYMGLN--KAGP-FKP-SYYSMDGFSVV-KLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGHSN 345 (542)
Q Consensus 275 ~~~a~~lg~~--e~~p-~~a-~ea~mdG~~v~-~~~~a~~~~d~~~t~t----g~~~vi~~~~~~~mk~gail~n~gh~~ 345 (542)
+++++.+|+. ..|| ... ..+.-.|.+.. +++++++++|+|++++ .++++|+.+.|+.||+|++++|+|++.
T Consensus 162 A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~ 241 (320)
T 1gdh_A 162 AKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGD 241 (320)
T ss_dssp HHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGG
T ss_pred HHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCc
Confidence 9999999983 2344 222 23334577766 7899999999999953 478999999999999999999999975
Q ss_pred ccccccccc
Q psy4626 346 TEIDVNSLR 354 (542)
Q Consensus 346 ~Ei~~~~l~ 354 (542)
. +|..+|.
T Consensus 242 ~-vd~~aL~ 249 (320)
T 1gdh_A 242 L-VDNELVV 249 (320)
T ss_dssp G-BCHHHHH
T ss_pred c-cCHHHHH
Confidence 4 3434333
No 146
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.27 E-value=2.1e-06 Score=88.13 Aligned_cols=93 Identities=11% Similarity=0.093 Sum_probs=67.7
Q ss_pred HhcCCcccc----ccccccHHHHhhcCCCC----CCCCCCCccccCCeeeeehhhhcccCcEEEEc----cCCCCccCHh
Q psy4626 260 SLHLPTFDA----HLTELSDEQAKYMGLNK----AGPFKPSYYSMDGFSVVKLNEVIRTVDIVVTA----TGNKNVVTRE 327 (542)
Q Consensus 260 ~l~L~~lg~----~i~~lt~~~a~~lg~~e----~~p~~a~ea~mdG~~v~~~~~a~~~~d~~~t~----tg~~~vi~~~ 327 (542)
++..+++|+ .|++..+++++++|+.. .+|.+. +..-..+...+++|+++++|||+++ ..++++|+.+
T Consensus 136 ~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~-~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~ 214 (315)
T 3pp8_A 136 TREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSW-PGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSE 214 (315)
T ss_dssp CSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCC-TTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHH
T ss_pred CcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhh-hhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHH
Confidence 345567776 89999999999999943 233221 1111111124789999999999994 4688999999
Q ss_pred HHhcCCCCcEEEccCCCCccccccccc
Q psy4626 328 HMDKMKNGCVVCNMGHSNTEIDVNSLR 354 (542)
Q Consensus 328 ~~~~mk~gail~n~gh~~~Ei~~~~l~ 354 (542)
.|+.||+|++++|+|++.. +|-++|.
T Consensus 215 ~l~~mk~gailIN~aRG~~-vd~~aL~ 240 (315)
T 3pp8_A 215 LLDQLPDGAYVLNLARGVH-VQEADLL 240 (315)
T ss_dssp HHTTSCTTEEEEECSCGGG-BCHHHHH
T ss_pred HHhhCCCCCEEEECCCChh-hhHHHHH
Confidence 9999999999999999987 3544444
No 147
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=98.27 E-value=3.1e-06 Score=86.55 Aligned_cols=111 Identities=15% Similarity=0.152 Sum_probs=84.3
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCce-eeC-----HHHH------hcCCcEEEEcC
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFS-VVK-----LNEV------IRTVDIVVTAT 140 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~-v~~-----l~e~------l~~aDvVi~at 140 (542)
..+|++|+|.|+|.+|...++.++.+|+ .|++++.++.|...++..|++ +++ ..+. ..+.|++++++
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~ 237 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETA 237 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECS
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcccccccc
Confidence 4689999999999999999999999999 567889999998888889975 332 2221 15789999999
Q ss_pred CCcccCCHHHHhccCCCeEEEeccCCCc-----ccChHhhcCCCcceeee
Q psy4626 141 GNKNVVTREHMDKMKNGCVVCNMGHSNT-----EIDVNSLRTPDLTWEKV 185 (542)
Q Consensus 141 G~~~lI~~e~l~~mk~GailvnvG~g~~-----eid~~aL~~~~l~v~~~ 185 (542)
|....++ ..++.+++++.++.+|.... ..++..+..+++++.++
T Consensus 238 G~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~ 286 (346)
T 4a2c_A 238 GVPQTVE-LAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGS 286 (346)
T ss_dssp CSHHHHH-HHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEEC
T ss_pred cccchhh-hhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEE
Confidence 9877774 78999999999999987642 22333444445555443
No 148
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=98.26 E-value=1.4e-06 Score=88.89 Aligned_cols=104 Identities=16% Similarity=0.181 Sum_probs=80.3
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhh-hcCCce-eeC-----HHHHh--
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQA-CMDGFS-VVK-----LNEVI-- 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A-~~~G~~-v~~-----l~e~l-- 130 (542)
...|+++.+.. ...+|++|+|+|. |.||+.+++.++..|++|+++++++.+...+ ...|.+ +++ ..+.+
T Consensus 135 ~tA~~al~~~~-~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 213 (336)
T 4b7c_A 135 MTAYFALLDVG-QPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKR 213 (336)
T ss_dssp HHHHHHHHHTT-CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHH
Confidence 44566764332 3458999999999 9999999999999999999999999888777 677765 222 22222
Q ss_pred ---cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC
Q psy4626 131 ---RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 131 ---~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
.+.|++|+++|.. .+ ...++.+++++.++.+|...
T Consensus 214 ~~~~~~d~vi~~~g~~-~~-~~~~~~l~~~G~iv~~G~~~ 251 (336)
T 4b7c_A 214 ECPKGIDVFFDNVGGE-IL-DTVLTRIAFKARIVLCGAIS 251 (336)
T ss_dssp HCTTCEEEEEESSCHH-HH-HHHHTTEEEEEEEEECCCGG
T ss_pred hcCCCceEEEECCCcc-hH-HHHHHHHhhCCEEEEEeecc
Confidence 3699999999863 44 47899999999999998653
No 149
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=98.26 E-value=2.9e-06 Score=87.22 Aligned_cols=117 Identities=16% Similarity=0.127 Sum_probs=84.8
Q ss_pred HHHHHHHHhhcCccccCcEEEEEc-CChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeC----HHHHh-----
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCG-YGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVK----LNEVI----- 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG-~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~----l~e~l----- 130 (542)
...|+++.+.. ...+|++|+|+| .|.||+.+++.++..|++|+++ .++.+...+...|++.++ ..+.+
T Consensus 136 ~ta~~~l~~~~-~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~~~~~~~~~~~~~~~ 213 (343)
T 3gaz_A 136 ITAWEGLVDRA-QVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPIDASREPEDYAAEHTA 213 (343)
T ss_dssp HHHHHHHTTTT-CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEETTSCHHHHHHHHHT
T ss_pred HHHHHHHHHhc-CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEeccCCCHHHHHHHHhc
Confidence 34566663332 345899999999 7999999999999999999999 788888777777876543 22221
Q ss_pred -cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcce
Q psy4626 131 -RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTW 182 (542)
Q Consensus 131 -~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v 182 (542)
.++|++++++|.. .+ ...++.+++++.++.+|... .++...+..+++++
T Consensus 214 ~~g~D~vid~~g~~-~~-~~~~~~l~~~G~iv~~g~~~-~~~~~~~~~~~~~~ 263 (343)
T 3gaz_A 214 GQGFDLVYDTLGGP-VL-DASFSAVKRFGHVVSCLGWG-THKLAPLSFKQATY 263 (343)
T ss_dssp TSCEEEEEESSCTH-HH-HHHHHHEEEEEEEEESCCCS-CCCCHHHHHTTCEE
T ss_pred CCCceEEEECCCcH-HH-HHHHHHHhcCCeEEEEcccC-ccccchhhhcCcEE
Confidence 3799999999863 44 46889999999999998654 33444443333433
No 150
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=98.25 E-value=2.2e-06 Score=87.71 Aligned_cols=90 Identities=19% Similarity=0.276 Sum_probs=73.2
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhhhhhcCCc--e-eeCHHH-HhcCCcEEEEcCCCcc---cCC
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICALQACMDGF--S-VVKLNE-VIRTVDIVVTATGNKN---VVT 147 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~~A~~~G~--~-v~~l~e-~l~~aDvVi~atG~~~---lI~ 147 (542)
-++|+|||+|.||..+|+.++..|. +|+++|+++.+...+...|. . ..++++ +++++|+||.|+.... ++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl- 111 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIA- 111 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGGHHHHH-
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHHHHHHH-
Confidence 4799999999999999999999999 99999999988777777776 2 346777 8899999999975432 22
Q ss_pred HHHHhccCCCeEEEeccCCC
Q psy4626 148 REHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 148 ~e~l~~mk~GailvnvG~g~ 167 (542)
.+....+++++++++++...
T Consensus 112 ~~l~~~l~~~~iv~d~~Svk 131 (314)
T 3ggo_A 112 KKLSYILSEDATVTDQGSVK 131 (314)
T ss_dssp HHHHHHSCTTCEEEECCSCC
T ss_pred HHHhhccCCCcEEEECCCCc
Confidence 24455689999999988764
No 151
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=98.25 E-value=1.2e-06 Score=90.40 Aligned_cols=90 Identities=21% Similarity=0.327 Sum_probs=71.3
Q ss_pred ccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchh-hhhhhcCCceeeCHHHHhcCCcEEEEcCCCcc---cCCHHH
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPIC-ALQACMDGFSVVKLNEVIRTVDIVVTATGNKN---VVTREH 150 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r-~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~---lI~~e~ 150 (542)
+.+++|+|||+|.+|..+|+.++..|.+|+++++++.+ ...+...|+.+.+++++++.+|+||.|+.... ++..+.
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~~~~~v~~~~i 93 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLYKEEI 93 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHHHHHT
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcHHHHHHHHHHH
Confidence 56889999999999999999999999999999998765 44566678876688888999999999975432 221123
Q ss_pred HhccCCCeEEEecc
Q psy4626 151 MDKMKNGCVVCNMG 164 (542)
Q Consensus 151 l~~mk~GailvnvG 164 (542)
...+++|++++.++
T Consensus 94 ~~~l~~~~ivi~~~ 107 (338)
T 1np3_A 94 EPNLKKGATLAFAH 107 (338)
T ss_dssp GGGCCTTCEEEESC
T ss_pred HhhCCCCCEEEEcC
Confidence 34688999999774
No 152
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.24 E-value=5e-06 Score=83.28 Aligned_cols=100 Identities=22% Similarity=0.243 Sum_probs=75.6
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhh-hhcCCceee-CHHHHhcCCcEEEEc
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQ-ACMDGFSVV-KLNEVIRTVDIVVTA 139 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~-A~~~G~~v~-~l~e~l~~aDvVi~a 139 (542)
++..++.+. +..+.|++++|+|+|.+|+.++..|...|++|+++++++.+... +...|..+. ++.+.++++|+||.|
T Consensus 115 G~~~~l~~~-~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~a 193 (275)
T 2hk9_A 115 GFLKSLKSL-IPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNT 193 (275)
T ss_dssp HHHHHHHHH-CTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEEC
T ss_pred HHHHHHHHh-CCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEe
Confidence 344444443 34678999999999999999999999999999999999877553 333465554 667788899999999
Q ss_pred CCCcc------cCCHHHHhccCCCeEEEeccC
Q psy4626 140 TGNKN------VVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 140 tG~~~------lI~~e~l~~mk~GailvnvG~ 165 (542)
+.... .+. ++.+++|.++++++.
T Consensus 194 tp~~~~~~~~~~i~---~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 194 TSVGLKDEDPEIFN---YDLIKKDHVVVDIIY 222 (275)
T ss_dssp SSTTSSTTCCCSSC---GGGCCTTSEEEESSS
T ss_pred CCCCCCCCCCCCCC---HHHcCCCCEEEEcCC
Confidence 86432 222 456889999999886
No 153
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=98.24 E-value=2.4e-06 Score=86.79 Aligned_cols=92 Identities=16% Similarity=0.136 Sum_probs=74.7
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcccCC------H
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKNVVT------R 148 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~------~ 148 (542)
.-++|+|||+|.+|..+|+.|...|.+|+++|+++.+.......|... .+++++++.+|+||.|+.++..+. .
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~ 99 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKG 99 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTT
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCch
Confidence 347899999999999999999999999999999998877666677764 468888999999999986543332 1
Q ss_pred HHHhccCCCeEEEeccCCC
Q psy4626 149 EHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 149 e~l~~mk~GailvnvG~g~ 167 (542)
+.+..+++|.++++++...
T Consensus 100 ~l~~~l~~g~~vv~~st~~ 118 (310)
T 3doj_A 100 GVLEQICEGKGYIDMSTVD 118 (310)
T ss_dssp CGGGGCCTTCEEEECSCCC
T ss_pred hhhhccCCCCEEEECCCCC
Confidence 2245688999999998764
No 154
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=98.24 E-value=2.8e-06 Score=87.36 Aligned_cols=118 Identities=16% Similarity=0.048 Sum_probs=85.2
Q ss_pred HHHHHHhhcCccccC-cEEEEE-cCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeC-----HHHHh----
Q psy4626 63 IIDSLKRSTDVMFGG-KQVVLC-GYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVK-----LNEVI---- 130 (542)
Q Consensus 63 ~~~ai~r~~~~~l~G-ktVvVi-G~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~-----l~e~l---- 130 (542)
.|+++.++. ..| ++|+|. |.|.||+.+++.++.+|++|++++.++.+...+...|++ +++ ..+.+
T Consensus 153 a~~~~~~~~---~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~ 229 (349)
T 3pi7_A 153 AIAMFDIVK---QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVM 229 (349)
T ss_dssp HHHHHHHHH---HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHH
T ss_pred HHHHHHHHh---hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHh
Confidence 344444442 345 677776 899999999999999999999999999988878777875 332 22221
Q ss_pred --cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC---cccCh-HhhcCCCcceeee
Q psy4626 131 --RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN---TEIDV-NSLRTPDLTWEKV 185 (542)
Q Consensus 131 --~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~---~eid~-~aL~~~~l~v~~~ 185 (542)
.+.|++++|+|.... .+.++.+++++.++.+|... ..++. ..+..+++++.+.
T Consensus 230 ~~~g~D~vid~~g~~~~--~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 288 (349)
T 3pi7_A 230 KAEQPRIFLDAVTGPLA--SAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGF 288 (349)
T ss_dssp HHHCCCEEEESSCHHHH--HHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEEC
T ss_pred cCCCCcEEEECCCChhH--HHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEE
Confidence 379999999997654 57899999999999998542 34454 4454455555543
No 155
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.24 E-value=1.1e-06 Score=90.70 Aligned_cols=187 Identities=13% Similarity=0.146 Sum_probs=115.4
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCC--CeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKN--GCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAE 205 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~--GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~ 205 (542)
+.++++|+++....+ -++++.++.+++ -..+...|.|-+.+|++++..+++.+.....
T Consensus 42 ~~~~~~d~~i~~~~~--~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~p~------------------ 101 (333)
T 1j4a_A 42 ALAKGADGVVVYQQL--DYIAETLQALADNGITKMSLRNVGVDNIDMAKAKELGFQITNVPV------------------ 101 (333)
T ss_dssp GGGTTCSEEEECCSS--CBCHHHHHHHHHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCC------------------
T ss_pred HHhcCCcEEEEcCCC--CCCHHHHHhccccCCeEEEECCcccccccHHHHHhCCCEEEeCCC------------------
Confidence 456889999875322 366788888865 6677788888888999888765544432210
Q ss_pred CCcccccCCCChhHHHh------hHHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccH
Q psy4626 206 GRLVNLSCSSLPSFVVS------ITACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSD 275 (542)
Q Consensus 206 GrLvnl~~~thp~~vmd------~sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~ 275 (542)
.++..+-+ ++++.++-......+. ++|... ..... ++..+++|+ .|++..+
T Consensus 102 ---------~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~--g~w~~~-~~~~~-------~l~g~~vgIiG~G~IG~~~A 162 (333)
T 1j4a_A 102 ---------YSPNAIAEHAAIQAARILRQDKAMDEKVAR--HDLRWA-PTIGR-------EVRDQVVGVVGTGHIGQVFM 162 (333)
T ss_dssp ---------SCHHHHHHHHHHHHHHHHHTHHHHHHHHHT--TBCCCT-TCCBC-------CGGGSEEEEECCSHHHHHHH
T ss_pred ---------CCchHHHHHHHHHHHHHHcCHHHHHHHHHc--CCCccC-Ccccc-------cCCCCEEEEEccCHHHHHHH
Confidence 01111111 1222222222222222 345311 00111 234456665 8888889
Q ss_pred HHHhhcCCC--CCCCCCCCccccCCeeee-ehhhhcccCcEEEEcc----CCCCccCHhHHhcCCCCcEEEccCCCCccc
Q psy4626 276 EQAKYMGLN--KAGPFKPSYYSMDGFSVV-KLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGHSNTEI 348 (542)
Q Consensus 276 ~~a~~lg~~--e~~p~~a~ea~mdG~~v~-~~~~a~~~~d~~~t~t----g~~~vi~~~~~~~mk~gail~n~gh~~~Ei 348 (542)
++++.+|+. ..||...-++ -++++.. +++++++++|+|++++ .++++|+.+.|+.||+|++++|+|++.. +
T Consensus 163 ~~l~~~G~~V~~~d~~~~~~~-~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~-v 240 (333)
T 1j4a_A 163 QIMEGFGAKVITYDIFRNPEL-EKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPL-V 240 (333)
T ss_dssp HHHHHTTCEEEEECSSCCHHH-HHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGG-B
T ss_pred HHHHHCCCEEEEECCCcchhH-HhhCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcc-c
Confidence 999999983 2233332111 1234444 7899999999999954 4789999999999999999999999876 5
Q ss_pred ccccccC
Q psy4626 349 DVNSLRT 355 (542)
Q Consensus 349 ~~~~l~~ 355 (542)
|-++|.+
T Consensus 241 d~~aL~~ 247 (333)
T 1j4a_A 241 DTDAVIR 247 (333)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 6555554
No 156
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=98.23 E-value=3.4e-06 Score=84.89 Aligned_cols=90 Identities=16% Similarity=0.249 Sum_probs=72.9
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcccCCH------HH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKNVVTR------EH 150 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~~------e~ 150 (542)
++|+|+|+|.+|..+|+.|...|.+|+++|+++.+.......|... .+++++++.+|+||.|+.....+.. +.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 5899999999999999999999999999999998877666667764 4678889999999999864433321 23
Q ss_pred HhccCCCeEEEeccCCC
Q psy4626 151 MDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 151 l~~mk~GailvnvG~g~ 167 (542)
++.++++.++++++...
T Consensus 84 ~~~l~~~~~vi~~st~~ 100 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIA 100 (302)
T ss_dssp GGSSCSSCEEEECSCCC
T ss_pred HhcCCCCcEEEECCCCC
Confidence 44688999999987664
No 157
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=98.22 E-value=2.4e-06 Score=86.47 Aligned_cols=91 Identities=21% Similarity=0.236 Sum_probs=73.3
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee--eCHHHHhcCCcEEEEcCCCcccCC------H
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV--VKLNEVIRTVDIVVTATGNKNVVT------R 148 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v--~~l~e~l~~aDvVi~atG~~~lI~------~ 148 (542)
.++|+|||+|.+|..+|..|...|.+|+++|+++.+.......|... .+++++++.+|+||.|+.+...+. .
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 46899999999999999999999999999999998877666667643 567888899999999987643332 1
Q ss_pred HHHhccCCCeEEEeccCCC
Q psy4626 149 EHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 149 e~l~~mk~GailvnvG~g~ 167 (542)
+..+.+++|.++++++...
T Consensus 87 ~l~~~l~~g~ivv~~st~~ 105 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTIS 105 (303)
T ss_dssp CCGGGSCTTCEEEECSCCC
T ss_pred hHHhhCCCCCEEEecCCCC
Confidence 2235678999999998764
No 158
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=98.21 E-value=1.5e-06 Score=88.22 Aligned_cols=88 Identities=22% Similarity=0.275 Sum_probs=72.5
Q ss_pred CcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCHHHH-----h--cCCcEEEEcCCCcccCC
Q psy4626 77 GKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKLNEV-----I--RTVDIVVTATGNKNVVT 147 (542)
Q Consensus 77 GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l~e~-----l--~~aDvVi~atG~~~lI~ 147 (542)
|+ |+|.|. |.+|+.+++.++.+|++|++++.++.+...+...|++ +++..+. + .+.|++++++|.. .+
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~~-~~- 224 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDK-VL- 224 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCHH-HH-
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCcH-HH-
Confidence 56 999998 9999999999999999999999999988888888875 3333221 1 3689999999875 44
Q ss_pred HHHHhccCCCeEEEeccCCC
Q psy4626 148 REHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 148 ~e~l~~mk~GailvnvG~g~ 167 (542)
.+.++.+++++.++.+|...
T Consensus 225 ~~~~~~l~~~G~iv~~G~~~ 244 (324)
T 3nx4_A 225 AKVLAQMNYGGCVAACGLAG 244 (324)
T ss_dssp HHHHHTEEEEEEEEECCCTT
T ss_pred HHHHHHHhcCCEEEEEecCC
Confidence 47899999999999999753
No 159
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=98.21 E-value=5.2e-06 Score=84.68 Aligned_cols=115 Identities=19% Similarity=0.242 Sum_probs=83.3
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeC-----HHH----H
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVK-----LNE----V 129 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~-----l~e----~ 129 (542)
...|+++.+.. ....|++|+|+|. |.||+.+++.++..|++|+++++++.+...+...|.+ +.+ ..+ .
T Consensus 131 ~ta~~~l~~~~-~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~ 209 (333)
T 1wly_A 131 MTAQYLLHQTH-KVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREI 209 (333)
T ss_dssp HHHHHHHHTTS-CCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHHhh-CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHH
Confidence 34567765432 2457999999995 9999999999999999999999998777666656654 222 111 1
Q ss_pred h--cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC---cccChH-hhcCC
Q psy4626 130 I--RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN---TEIDVN-SLRTP 178 (542)
Q Consensus 130 l--~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~---~eid~~-aL~~~ 178 (542)
. .+.|++|+++|. ..+ .+.++.+++++.++.+|... .+++.. .+..+
T Consensus 210 ~~~~~~d~vi~~~g~-~~~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~ 262 (333)
T 1wly_A 210 TGGKGVDVVYDSIGK-DTL-QKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVR 262 (333)
T ss_dssp HTTCCEEEEEECSCT-TTH-HHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTT
T ss_pred hCCCCCeEEEECCcH-HHH-HHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhc
Confidence 2 368999999987 444 47899999999999998653 234544 44333
No 160
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.21 E-value=3.3e-06 Score=87.85 Aligned_cols=190 Identities=18% Similarity=0.233 Sum_probs=116.2
Q ss_pred hcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCCcc
Q psy4626 130 IRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLV 209 (542)
Q Consensus 130 l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLv 209 (542)
+.++|+++..... .++++.++.+++-..|...|.|-+.+|++++.++++.+..+..
T Consensus 61 ~~~~~~~~~~~~~--~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~V~n~~~---------------------- 116 (347)
T 1mx3_A 61 LNEAVGALMYHTI--TLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPA---------------------- 116 (347)
T ss_dssp HHHEEEEEECSSS--CBCHHHHTTCSSCCEEEESSSCCTTBCHHHHHHTTCEEECCCS----------------------
T ss_pred hcCCeEEEEeCCC--CCCHHHHhhCCCCCEEEEcccccCcccHHHHHhCCceEEECCC----------------------
Confidence 3567776654322 3678889999888899999999888999888765544433210
Q ss_pred cccCCCChhHHHhhHHH------HHHHHHHHHhcCCCCCCCCccccCChhhHHH---HHHhcCCcccc----ccccccHH
Q psy4626 210 NLSCSSLPSFVVSITAC------TQALALIELFNAPSGRYKSDVYLLPKKMDEY---VASLHLPTFDA----HLTELSDE 276 (542)
Q Consensus 210 nl~~~thp~~vmd~sfa------~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~---VA~l~L~~lg~----~i~~lt~~ 276 (542)
. ++..+-+..++ .++-......+. ++|..... ..... .-++..+++|+ .|++..++
T Consensus 117 ----~-~~~~vAE~~~~l~L~~~R~~~~~~~~~~~--g~w~~~~~----~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~ 185 (347)
T 1mx3_A 117 ----A-SVEETADSTLCHILNLYRRATWLHQALRE--GTRVQSVE----QIREVASGAARIRGETLGIIGLGRVGQAVAL 185 (347)
T ss_dssp ----T-THHHHHHHHHHHHHHHHHCHHHHHHHHHT--TCCCCSHH----HHHHHTTTCCCCTTCEEEEECCSHHHHHHHH
T ss_pred ----C-CHHHHHHHHHHHHHHHHHhHHHHHHHHHc--CCcccccc----cccccccCccCCCCCEEEEEeECHHHHHHHH
Confidence 0 11111121111 111111112222 45643210 00000 01344566666 88888999
Q ss_pred HHhhcCCC--CCCCCCC-CccccCCeeee-ehhhhcccCcEEEEc----cCCCCccCHhHHhcCCCCcEEEccCCCCccc
Q psy4626 277 QAKYMGLN--KAGPFKP-SYYSMDGFSVV-KLNEVIRTVDIVVTA----TGNKNVVTREHMDKMKNGCVVCNMGHSNTEI 348 (542)
Q Consensus 277 ~a~~lg~~--e~~p~~a-~ea~mdG~~v~-~~~~a~~~~d~~~t~----tg~~~vi~~~~~~~mk~gail~n~gh~~~Ei 348 (542)
+++.+|+. ..||... ..+...|.+.. +++|+++++|||+++ ..++++|+.+.|+.||+|++++|++++...
T Consensus 186 ~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~v- 264 (347)
T 1mx3_A 186 RAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLV- 264 (347)
T ss_dssp HHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSB-
T ss_pred HHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHH-
Confidence 99999983 2233322 11223466543 789999999999994 357899999999999999999999999874
Q ss_pred ccccccC
Q psy4626 349 DVNSLRT 355 (542)
Q Consensus 349 ~~~~l~~ 355 (542)
|.++|.+
T Consensus 265 d~~aL~~ 271 (347)
T 1mx3_A 265 DEKALAQ 271 (347)
T ss_dssp CHHHHHH
T ss_pred hHHHHHH
Confidence 4444443
No 161
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=98.21 E-value=9.8e-07 Score=94.02 Aligned_cols=98 Identities=16% Similarity=0.242 Sum_probs=67.1
Q ss_pred cCcc-ccCcEEEEEcCChhHHHHHHHHHh-CCCEEEEE-eCCchhhhhhhcCCceeeCHHHHhcCC---cEEEEcCCCcc
Q psy4626 71 TDVM-FGGKQVVLCGYGEVGKGCCQSLKG-LGCVIYIT-EIDPICALQACMDGFSVVKLNEVIRTV---DIVVTATGNKN 144 (542)
Q Consensus 71 ~~~~-l~GktVvViG~G~IG~~vA~~l~~-~Ga~Viv~-d~dp~r~~~A~~~G~~v~~l~e~l~~a---DvVi~atG~~~ 144 (542)
.+.. +.|+||+|+|+|.||+.+|+.|++ +|++|+.+ |.+.. . ....-++++++++.+ +.+.....+.+
T Consensus 205 ~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~--~----~~~~gvdl~~L~~~~d~~~~l~~l~~t~~ 278 (419)
T 1gtm_A 205 LGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGG--I----YNPDGLNADEVLKWKNEHGSVKDFPGATN 278 (419)
T ss_dssp TTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCE--E----EEEEEECHHHHHHHHHHHSSSTTCTTSEE
T ss_pred hCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCcc--c----cCccCCCHHHHHHHHHhcCEeecCccCee
Confidence 4567 899999999999999999999999 99999988 43321 0 011223555554322 22212234666
Q ss_pred cCCHHHHhccCCCeEEEeccCCC--cccChHhhc
Q psy4626 145 VVTREHMDKMKNGCVVCNMGHSN--TEIDVNSLR 176 (542)
Q Consensus 145 lI~~e~l~~mk~GailvnvG~g~--~eid~~aL~ 176 (542)
++.+.|..||+ .+++|+++++ ++-+..+|.
T Consensus 279 -i~~~~l~~mk~-dilIn~ArG~~Vde~a~~aL~ 310 (419)
T 1gtm_A 279 -ITNEELLELEV-DVLAPAAIEEVITKKNADNIK 310 (419)
T ss_dssp -ECHHHHHHSCC-SEEEECSCSCCBCTTGGGGCC
T ss_pred -eCHHHHHhCCC-CEEEECCCcccCCHHHHHHhc
Confidence 77888999988 5999999986 233355554
No 162
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=98.21 E-value=4e-06 Score=86.57 Aligned_cols=121 Identities=12% Similarity=0.066 Sum_probs=86.8
Q ss_pred HHHHHHHHhhcCccccCcEEEEEc-CChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCH-----HHH----
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCG-YGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKL-----NEV---- 129 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG-~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l-----~e~---- 129 (542)
...|+++.+..+ ...|++|+|+| .|.||+.+++.++..|++|+++++++.+...+...|.+ +++. .+.
T Consensus 148 ~tA~~al~~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 226 (354)
T 2j8z_A 148 LTAFQLLHLVGN-VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKF 226 (354)
T ss_dssp HHHHHHHTTTSC-CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHHhcC-CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHH
Confidence 345666643322 45799999999 69999999999999999999999999887766666654 2221 111
Q ss_pred h--cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC---cccCh-HhhcCCCcceee
Q psy4626 130 I--RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN---TEIDV-NSLRTPDLTWEK 184 (542)
Q Consensus 130 l--~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~---~eid~-~aL~~~~l~v~~ 184 (542)
. .+.|++|+++|.. .+ .+.++.|++++.++.+|... .++++ ..+..+++++.+
T Consensus 227 ~~~~~~d~vi~~~G~~-~~-~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g 285 (354)
T 2j8z_A 227 TKGAGVNLILDCIGGS-YW-EKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLIT 285 (354)
T ss_dssp TTTSCEEEEEESSCGG-GH-HHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEE
T ss_pred hcCCCceEEEECCCch-HH-HHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEE
Confidence 2 3689999999975 44 46799999999999998653 34555 545444444443
No 163
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=98.21 E-value=3e-06 Score=84.99 Aligned_cols=89 Identities=12% Similarity=0.103 Sum_probs=66.4
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcC-----------C--------------c-eeeCHHHHhc
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMD-----------G--------------F-SVVKLNEVIR 131 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~-----------G--------------~-~v~~l~e~l~ 131 (542)
++|+|+|+|.+|..+|+.+...|.+|+++|+++.+...+... | . ...+++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 689999999999999999999999999999999776544322 1 1 2346677889
Q ss_pred CCcEEEEcCCCc----ccCCHHHHhccCCCeEEEeccCC
Q psy4626 132 TVDIVVTATGNK----NVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 132 ~aDvVi~atG~~----~lI~~e~l~~mk~GailvnvG~g 166 (542)
++|+||+|.... ..+-.+..+.+++++++++.+++
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~ 123 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST 123 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 999999997642 11213445568999999954433
No 164
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=98.20 E-value=2.9e-06 Score=84.44 Aligned_cols=89 Identities=20% Similarity=0.320 Sum_probs=70.6
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhhhhhcCCce---eeCHHHHhc-CCcEEEEcCCCcc---cCCH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICALQACMDGFS---VVKLNEVIR-TVDIVVTATGNKN---VVTR 148 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~~A~~~G~~---v~~l~e~l~-~aDvVi~atG~~~---lI~~ 148 (542)
++|+|+|+|.+|..++..++..|. +|+++|+++.+...+...|.. ..+++++++ ++|+||.|+.... ++ .
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~-~ 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIA-K 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHH-H
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHHHHHHHH-H
Confidence 479999999999999999999998 999999999877666666763 335778888 9999999986432 22 2
Q ss_pred HHHhccCCCeEEEeccCCC
Q psy4626 149 EHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 149 e~l~~mk~GailvnvG~g~ 167 (542)
+....+++++++++++...
T Consensus 81 ~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 81 KLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp HHHHHSCTTCEEEECCSCC
T ss_pred HHHhhCCCCcEEEECCCCc
Confidence 3445688999999988664
No 165
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=98.20 E-value=9.7e-06 Score=85.34 Aligned_cols=122 Identities=17% Similarity=0.191 Sum_probs=91.3
Q ss_pred HhHHHHHHHHHHHHH---hhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCch----h---h-----hhhh
Q psy4626 54 DNLYMCRESIIDSLK---RSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPI----C---A-----LQAC 117 (542)
Q Consensus 54 d~~~g~~~s~~~ai~---r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~----r---~-----~~A~ 117 (542)
|...|++--+.-++. +.++..+...+|+|+|.|..|.++|+.+.++|+ +|+++|++.. | + ..+.
T Consensus 162 DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~ 241 (398)
T 2a9f_A 162 DDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAK 241 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHH
T ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhh
Confidence 445566544443332 345667888999999999999999999999999 9999998741 1 1 1111
Q ss_pred cCC--ceeeCHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhc
Q psy4626 118 MDG--FSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLR 176 (542)
Q Consensus 118 ~~G--~~v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~ 176 (542)
... ....++.++++++|++|-+++ +++++++.++.|+++.+|...+....|+..+...
T Consensus 242 ~~~~~~~~~~L~eav~~ADV~IG~Sa-pgl~T~EmVk~Ma~~pIIfalsNPt~E~~pe~a~ 301 (398)
T 2a9f_A 242 VTNREFKSGTLEDALEGADIFIGVSA-PGVLKAEWISKMAARPVIFAMANPIPEIYPDEAL 301 (398)
T ss_dssp HHSCTTCCCSCSHHHHTTCSEEECCS-TTCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHH
T ss_pred ccCcccchhhHHHHhccCCEEEecCC-CCCCCHHHHHhhCCCCEEEECCCCCccCCHHHHH
Confidence 100 012357889999999999986 8999999999999999999999877777776554
No 166
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=98.20 E-value=7.7e-06 Score=84.99 Aligned_cols=104 Identities=15% Similarity=0.205 Sum_probs=78.2
Q ss_pred HHHHHHHHhhcCc---cccCcEEEEEc-CChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeC-----HHHHh
Q psy4626 61 ESIIDSLKRSTDV---MFGGKQVVLCG-YGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVK-----LNEVI 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~---~l~GktVvViG-~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~-----l~e~l 130 (542)
...|+++.+..+. ..+|++|+|+| .|.||+.+++.++.+|++|++++ ++.+...+...|++ +++ ..+.+
T Consensus 165 ~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~ 243 (375)
T 2vn8_A 165 LTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQL 243 (375)
T ss_dssp HHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHH
T ss_pred HHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHH
Confidence 4456676433221 45799999999 79999999999999999999988 67777777777875 332 22222
Q ss_pred ---cCCcEEEEcCCCc-ccCCHHHHhccCCCeEEEeccCC
Q psy4626 131 ---RTVDIVVTATGNK-NVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 131 ---~~aDvVi~atG~~-~lI~~e~l~~mk~GailvnvG~g 166 (542)
.++|++|+|+|.. ..+. +.++.+++++.++.+|..
T Consensus 244 ~~~~g~D~vid~~g~~~~~~~-~~~~~l~~~G~iv~~g~~ 282 (375)
T 2vn8_A 244 KSLKPFDFILDNVGGSTETWA-PDFLKKWSGATYVTLVTP 282 (375)
T ss_dssp HTSCCBSEEEESSCTTHHHHG-GGGBCSSSCCEEEESCCS
T ss_pred hhcCCCCEEEECCCChhhhhH-HHHHhhcCCcEEEEeCCC
Confidence 4799999999876 3333 678899999999999865
No 167
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=98.19 E-value=1.8e-06 Score=86.41 Aligned_cols=90 Identities=14% Similarity=0.157 Sum_probs=72.6
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcccCC------HHH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKNVVT------REH 150 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~------~e~ 150 (542)
++|+|+|+|.+|..+|+.|...|.+|+++|+++.+.......|... .+++++++++|+||.|+.+...+. .+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 3799999999999999999999999999999998877665667664 478888999999999987643332 123
Q ss_pred HhccCCCeEEEeccCCC
Q psy4626 151 MDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 151 l~~mk~GailvnvG~g~ 167 (542)
++.+++|.++++++...
T Consensus 82 ~~~l~~g~~vv~~st~~ 98 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVD 98 (287)
T ss_dssp GGTCCTTCEEEECSCCC
T ss_pred hhcccCCCEEEECCCCC
Confidence 45678999999998764
No 168
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=98.19 E-value=5.1e-06 Score=85.78 Aligned_cols=117 Identities=20% Similarity=0.250 Sum_probs=84.6
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCH-----HHH----
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKL-----NEV---- 129 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l-----~e~---- 129 (542)
...|+++.+..+ ...|++|+|+|. |.||+.+++.++..|++|+++++++.+...+...|.+ +.+. .+.
T Consensus 156 ~ta~~al~~~~~-~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~ 234 (351)
T 1yb5_A 156 FTAYRALIHSAC-VKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKY 234 (351)
T ss_dssp HHHHHHHHTTSC-CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHH
T ss_pred HHHHHHHHHhhC-CCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHH
Confidence 345667654322 457999999998 9999999999999999999999999887777777764 2221 111
Q ss_pred h--cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC-cccChHhhcCCCc
Q psy4626 130 I--RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN-TEIDVNSLRTPDL 180 (542)
Q Consensus 130 l--~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~-~eid~~aL~~~~l 180 (542)
. .+.|++|+++|.. .+ .+.++.+++++.++.+|... .+++...+..+++
T Consensus 235 ~~~~~~D~vi~~~G~~-~~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~ 286 (351)
T 1yb5_A 235 VGEKGIDIIIEMLANV-NL-SKDLSLLSHGGRVIVVGSRGTIEINPRDTMAKES 286 (351)
T ss_dssp HCTTCEEEEEESCHHH-HH-HHHHHHEEEEEEEEECCCCSCEEECTHHHHTTTC
T ss_pred cCCCCcEEEEECCChH-HH-HHHHHhccCCCEEEEEecCCCCccCHHHHHhCCc
Confidence 2 2689999999865 34 36789999999999998642 3444444443333
No 169
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.19 E-value=6.3e-06 Score=84.38 Aligned_cols=184 Identities=16% Similarity=0.225 Sum_probs=114.2
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.++++|+++....+ -++++.++.+++-..+...|.|-+.+|++++.++++.+.....
T Consensus 39 ~~~~~~d~~i~~~~~--~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gi~v~n~~~-------------------- 96 (311)
T 2cuk_A 39 KRVEGAVGLIPTVED--RIDAEVMDRAKGLKVIACYSVGVDHVDLEAARERGIRVTHTPG-------------------- 96 (311)
T ss_dssp HHHTTCSEEECCTTS--CBCHHHHHHSTTCCEEECSSSCCTTBCHHHHHTTTCEEECCCS--------------------
T ss_pred HHhcCCeEEEEcCCC--CCCHHHHhhCCCCeEEEECCcCccccCHHHHHhCCcEEEECCC--------------------
Confidence 456889999854322 3677889999888889999999888999988765554432210
Q ss_pred cccccCCCChhHHHhh------HHHHHHHHHHHHhcCCCCCCCCcc--ccCChhhHHHHHHhcCCcccc----ccccccH
Q psy4626 208 LVNLSCSSLPSFVVSI------TACTQALALIELFNAPSGRYKSDV--YLLPKKMDEYVASLHLPTFDA----HLTELSD 275 (542)
Q Consensus 208 Lvnl~~~thp~~vmd~------sfa~q~la~~~L~~~~~~~~~~gv--~~lp~~~d~~VA~l~L~~lg~----~i~~lt~ 275 (542)
. +...+-+. +++.++-......+. ++|...- ...+. ++..+++|+ .|++..+
T Consensus 97 ------~-~~~~vAE~~~~~~L~~~R~~~~~~~~~~~--g~w~~~~~~~~~~~-------~l~g~~vgIIG~G~IG~~~A 160 (311)
T 2cuk_A 97 ------V-LTEATADLTLALLLAVARRVVEGAAYARD--GLWKAWHPELLLGL-------DLQGLTLGLVGMGRIGQAVA 160 (311)
T ss_dssp ------T-THHHHHHHHHHHHHHHHTTHHHHHHHHHT--TCCCCCCTTTTCBC-------CCTTCEEEEECCSHHHHHHH
T ss_pred ------C-ChHHHHHHHHHHHHHHHcChHHHHHHHHc--CCCCccccccccCc-------CCCCCEEEEEEECHHHHHHH
Confidence 0 11111111 111111111122222 4664210 00011 234455665 8888889
Q ss_pred HHHhhcCCC--CCCCCCCCccccCCeeeeehhhhcccCcEEEEc---c-CCCCccCHhHHhcCCCCcEEEccCCCCcccc
Q psy4626 276 EQAKYMGLN--KAGPFKPSYYSMDGFSVVKLNEVIRTVDIVVTA---T-GNKNVVTREHMDKMKNGCVVCNMGHSNTEID 349 (542)
Q Consensus 276 ~~a~~lg~~--e~~p~~a~ea~mdG~~v~~~~~a~~~~d~~~t~---t-g~~~vi~~~~~~~mk~gail~n~gh~~~Ei~ 349 (542)
++++.+|+. -.||...-.. ....+++++++++|+|+++ | .++++|+.+.|+.||+|++++|+|++.. +|
T Consensus 161 ~~l~~~G~~V~~~d~~~~~~~----~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~-vd 235 (311)
T 2cuk_A 161 KRALAFGMRVVYHARTPKPLP----YPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGAL-VD 235 (311)
T ss_dssp HHHHHTTCEEEEECSSCCSSS----SCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGG-BC
T ss_pred HHHHHCCCEEEEECCCCcccc----cccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCc-cC
Confidence 999999983 2233322111 2344789999999999995 3 6789999999999999999999999765 34
Q ss_pred ccccc
Q psy4626 350 VNSLR 354 (542)
Q Consensus 350 ~~~l~ 354 (542)
-++|.
T Consensus 236 ~~aL~ 240 (311)
T 2cuk_A 236 TEALV 240 (311)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 34443
No 170
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.18 E-value=6.5e-06 Score=81.62 Aligned_cols=100 Identities=19% Similarity=0.301 Sum_probs=74.3
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhh-hhcCCceeeCHHHHhcCCcEEEEcC
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQ-ACMDGFSVVKLNEVIRTVDIVVTAT 140 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~-A~~~G~~v~~l~e~l~~aDvVi~at 140 (542)
+++.++.+. +..+.| +++|+|+|.+|+.+++.|...|++|+++++++.+... +...|....+++++ +++|+||.|+
T Consensus 103 g~~~~l~~~-~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~~~~~~~~-~~~Divi~~t 179 (263)
T 2d5c_A 103 GFLEALKAG-GIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAVPLEKA-REARLLVNAT 179 (263)
T ss_dssp HHHHHHHHT-TCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCEECCGGGG-GGCSEEEECS
T ss_pred HHHHHHHHh-CCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccchhhHhhc-cCCCEEEEcc
Confidence 334444443 346789 9999999999999999999999999999999876543 22334444466777 8999999998
Q ss_pred CCc------ccCCHHHHhccCCCeEEEeccCCC
Q psy4626 141 GNK------NVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 141 G~~------~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
+.. ..+. .+.+++|.++++++...
T Consensus 180 p~~~~~~~~~~l~---~~~l~~g~~viD~~~~p 209 (263)
T 2d5c_A 180 RVGLEDPSASPLP---AELFPEEGAAVDLVYRP 209 (263)
T ss_dssp STTTTCTTCCSSC---GGGSCSSSEEEESCCSS
T ss_pred CCCCCCCCCCCCC---HHHcCCCCEEEEeecCC
Confidence 643 2232 46689999999988654
No 171
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=98.17 E-value=1.7e-06 Score=87.93 Aligned_cols=94 Identities=12% Similarity=0.047 Sum_probs=74.6
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcccC----CH
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKNVV----TR 148 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI----~~ 148 (542)
....++|+|||+|.+|..+|+.|...|.+|++||+++.+.......|... .++.++++++|+||.+......+ ..
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 85 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGM 85 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcc
Confidence 34567899999999999999999999999999999998876655557654 47888899999999998654322 21
Q ss_pred HHHhccCCCeEEEeccCCC
Q psy4626 149 EHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 149 e~l~~mk~GailvnvG~g~ 167 (542)
+.+..+++|.++++++...
T Consensus 86 ~~l~~~~~g~ivid~st~~ 104 (306)
T 3l6d_A 86 PGVARALAHRTIVDYTTNA 104 (306)
T ss_dssp TTHHHHTTTCEEEECCCCC
T ss_pred cchhhccCCCEEEECCCCC
Confidence 1344568999999998764
No 172
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=98.17 E-value=2.6e-06 Score=91.10 Aligned_cols=122 Identities=16% Similarity=0.133 Sum_probs=88.1
Q ss_pred HHHHHHHHhh-cCccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCH-----------
Q psy4626 61 ESIIDSLKRS-TDVMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKL----------- 126 (542)
Q Consensus 61 ~s~~~ai~r~-~~~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l----------- 126 (542)
...|+++.+. .....+|++|+|+|. |+||+.+++.++.+|++|++++.++.++..+...|++ +++.
T Consensus 212 ~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~ 291 (456)
T 3krt_A 212 STAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDE 291 (456)
T ss_dssp HHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEET
T ss_pred HHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccc
Confidence 3445565432 123468999999998 9999999999999999999999899888888778875 2221
Q ss_pred ------------HHH---h--cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC---cccChHhhcCCCcceee
Q psy4626 127 ------------NEV---I--RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN---TEIDVNSLRTPDLTWEK 184 (542)
Q Consensus 127 ------------~e~---l--~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~---~eid~~aL~~~~l~v~~ 184 (542)
+.+ . .++|+||+++|. ..+ ...++.+++++.++.+|... .+++...+..+.+++.+
T Consensus 292 ~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~-~~~-~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g 367 (456)
T 3krt_A 292 NTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR-ETF-GASVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIG 367 (456)
T ss_dssp TEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH-HHH-HHHHHHEEEEEEEEESCCTTCSEEEEEHHHHHHTTCEEEE
T ss_pred cccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc-hhH-HHHHHHhhCCcEEEEEecCCCcccccCHHHHHhcCeEEEE
Confidence 111 1 479999999997 455 47899999999999998643 34555555444444443
No 173
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.17 E-value=2.6e-06 Score=86.95 Aligned_cols=179 Identities=16% Similarity=0.163 Sum_probs=108.1
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.++++|+++... .+.+.++.+++-..+...|.|-+.+|+++.. +++.+...
T Consensus 27 ~~~~~~d~~i~~~-----~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~-~gi~v~~~---------------------- 78 (303)
T 1qp8_A 27 GDLGNVEAALVSR-----ITAEELAKMPRLKFIQVVTAGLDHLPWESIP-PHVTVAGN---------------------- 78 (303)
T ss_dssp SCCTTBCCCCBSC-----CCHHHHHHCTTCCCEEBSSSCCTTSCCTTSC-TTSCEECC----------------------
T ss_pred hhhCCCEEEEECC-----CCHHHHhhCCCCcEEEECCcCcccccHHHHh-cCCEEEEC----------------------
Confidence 4457788877432 2346788888888888888887777776542 22222211
Q ss_pred cccccCCCChhHHHh------hHHHHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHH
Q psy4626 208 LVNLSCSSLPSFVVS------ITACTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQ 277 (542)
Q Consensus 208 Lvnl~~~thp~~vmd------~sfa~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~ 277 (542)
... +...+-+ ++++.++.......+. ++|.... |.. ++..+++|+ .|++..+++
T Consensus 79 ----~~~-~~~~vAE~~~~~~L~~~R~~~~~~~~~~~--g~w~~~~---~~~------~l~g~~vgIIG~G~IG~~~A~~ 142 (303)
T 1qp8_A 79 ----AGS-NADAVAEFALALLLAPYKRIIQYGEKMKR--GDYGRDV---EIP------LIQGEKVAVLGLGEIGTRVGKI 142 (303)
T ss_dssp ----CSS-SHHHHHHHHHHHHHHHHTTHHHHHHHHHT--TCCCCCS---CCC------CCTTCEEEEESCSTHHHHHHHH
T ss_pred ----CCC-CchHHHHHHHHHHHHHHhCHHHHHHHHHc--CCCCCCC---CCC------CCCCCEEEEEccCHHHHHHHHH
Confidence 100 1111111 1111111111122222 4675320 110 344556666 888888999
Q ss_pred HhhcCCC--CCCCCCCCccccCCeeeeehhhhcccCcEEEEcc----CCCCccCHhHHhcCCCCcEEEccCCCCcccccc
Q psy4626 278 AKYMGLN--KAGPFKPSYYSMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVN 351 (542)
Q Consensus 278 a~~lg~~--e~~p~~a~ea~mdG~~v~~~~~a~~~~d~~~t~t----g~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~~ 351 (542)
++.+|+. -.||... +. ......+++++++++|+|++++ .++++|+.+.|+.||+|++++|+|+++. +|-.
T Consensus 143 l~~~G~~V~~~dr~~~-~~--~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~-vd~~ 218 (303)
T 1qp8_A 143 LAALGAQVRGFSRTPK-EG--PWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEV-LDRD 218 (303)
T ss_dssp HHHTTCEEEEECSSCC-CS--SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGG-BCHH
T ss_pred HHHCCCEEEEECCCcc-cc--CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcc-cCHH
Confidence 9999983 2344333 22 2333457899999999999943 6899999999999999999999999765 4544
Q ss_pred ccc
Q psy4626 352 SLR 354 (542)
Q Consensus 352 ~l~ 354 (542)
+|.
T Consensus 219 aL~ 221 (303)
T 1qp8_A 219 GVL 221 (303)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 174
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=98.17 E-value=4.9e-06 Score=78.22 Aligned_cols=102 Identities=19% Similarity=0.217 Sum_probs=76.1
Q ss_pred HHHHHHHhhcCccccCcEEEEEc-CChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCH-----HHH----h
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCG-YGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKL-----NEV----I 130 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG-~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l-----~e~----l 130 (542)
..|+++.+.. ....|++|+|+| .|.||+.+++.++..|++|+++++++.+...+...|.. +.+. .+. .
T Consensus 25 ta~~~l~~~~-~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~ 103 (198)
T 1pqw_A 25 TAWHSLCEVG-RLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELT 103 (198)
T ss_dssp HHHHHHHTTS-CCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHT
T ss_pred HHHHHHHHHh-CCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHh
Confidence 3456664432 245799999999 69999999999999999999999998877666666653 2221 111 1
Q ss_pred --cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 131 --RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 131 --~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
.+.|++|++.|.. .+ .+.++.|++++.++++|..
T Consensus 104 ~~~~~D~vi~~~g~~-~~-~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 104 DGYGVDVVLNSLAGE-AI-QRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp TTCCEEEEEECCCTH-HH-HHHHHTEEEEEEEEECSCG
T ss_pred CCCCCeEEEECCchH-HH-HHHHHHhccCCEEEEEcCC
Confidence 2589999998853 34 4788999999999999864
No 175
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=98.16 E-value=3.1e-06 Score=85.42 Aligned_cols=89 Identities=13% Similarity=0.151 Sum_probs=73.5
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcccCC---HHHHhc
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKNVVT---REHMDK 153 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~---~e~l~~ 153 (542)
++|+|||+|.+|..+|+.|...|.+|+++|+++.+.......|... .+++++++ +|+||.|+.+...+. .+..+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~~ 94 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAGH 94 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHTT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999998877666677765 47888888 999999987542221 345677
Q ss_pred cCCCeEEEeccCCC
Q psy4626 154 MKNGCVVCNMGHSN 167 (542)
Q Consensus 154 mk~GailvnvG~g~ 167 (542)
+++|.++++++...
T Consensus 95 l~~g~ivv~~st~~ 108 (296)
T 3qha_A 95 AKPGTVIAIHSTIS 108 (296)
T ss_dssp CCTTCEEEECSCCC
T ss_pred cCCCCEEEEeCCCC
Confidence 89999999998764
No 176
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=98.16 E-value=2.8e-06 Score=87.01 Aligned_cols=112 Identities=11% Similarity=0.089 Sum_probs=83.3
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCC-hhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeC-----HHHHh---
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYG-EVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVK-----LNEVI--- 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G-~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~-----l~e~l--- 130 (542)
.+.+.++.+.. ...+|++|+|+|.| .||+.+++.++.+|++|+++++++.+...+...|.+ +++ ..+.+
T Consensus 130 ~ta~~~~~~~~-~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~ 208 (340)
T 3gms_A 130 LTAWVTCTETL-NLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMEL 208 (340)
T ss_dssp HHHHHHHHTTS-CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHHhc-ccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHH
Confidence 34555554332 34589999999998 999999999999999999999999888877777775 332 22221
Q ss_pred ---cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC-cccChHhh
Q psy4626 131 ---RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN-TEIDVNSL 175 (542)
Q Consensus 131 ---~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~-~eid~~aL 175 (542)
.+.|++|+|+|..... +.++.+++++.++.+|... .++++..+
T Consensus 209 ~~~~g~Dvvid~~g~~~~~--~~~~~l~~~G~iv~~G~~~~~~~~~~~~ 255 (340)
T 3gms_A 209 TNGIGADAAIDSIGGPDGN--ELAFSLRPNGHFLTIGLLSGIQVNWAEI 255 (340)
T ss_dssp TTTSCEEEEEESSCHHHHH--HHHHTEEEEEEEEECCCTTSCCCCHHHH
T ss_pred hCCCCCcEEEECCCChhHH--HHHHHhcCCCEEEEEeecCCCCCCHHHh
Confidence 3799999999976543 5678999999999999753 34444433
No 177
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.15 E-value=3.2e-06 Score=87.43 Aligned_cols=185 Identities=15% Similarity=0.152 Sum_probs=114.1
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.++++|+++....+ -++++.++.+++-..+...|.|-+.+|++++.++++.+....
T Consensus 61 ~~~~~~d~~i~~~~~--~~~~~~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p--------------------- 117 (333)
T 3ba1_A 61 LQAESIRAVVGNSNA--GADAELIDALPKLEIVSSFSVGLDKVDLIKCEEKGVRVTNTP--------------------- 117 (333)
T ss_dssp HHTTTEEEEEECSSS--CBCHHHHHHCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCC---------------------
T ss_pred HHhCCCEEEEEcCCC--CCCHHHHhhCCCCcEEEEcCccccccCHHHHHhCCcEEEECC---------------------
Confidence 345789988864322 467888999999889999999988899988875444333221
Q ss_pred cccccCCCChhHHHhhHH------HHHHHHHHHHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----ccccccHHH
Q psy4626 208 LVNLSCSSLPSFVVSITA------CTQALALIELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQ 277 (542)
Q Consensus 208 Lvnl~~~thp~~vmd~sf------a~q~la~~~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~ 277 (542)
.. ++..+-+..+ +.++.......+. +.|.......+. ++..+++|+ .+++..+++
T Consensus 118 -----g~-~~~~vAE~~~~l~L~~~R~~~~~~~~~~~--g~w~~~~~~~~~-------~l~g~~vgIIG~G~iG~~vA~~ 182 (333)
T 3ba1_A 118 -----DV-LTDDVADLAIGLILAVLRRICECDKYVRR--GAWKFGDFKLTT-------KFSGKRVGIIGLGRIGLAVAER 182 (333)
T ss_dssp -----ST-THHHHHHHHHHHHHHHHTTHHHHHHHHHT--TGGGGCCCCCCC-------CCTTCCEEEECCSHHHHHHHHH
T ss_pred -----Cc-chHHHHHHHHHHHHHHHhCHHHHHHHHHc--CCCCcccccccc-------ccCCCEEEEECCCHHHHHHHHH
Confidence 00 1111111111 1111111122222 456421111111 233445555 888888999
Q ss_pred HhhcCCCC--CCCCCCCccccCCee-eeehhhhcccCcEEEEcc----CCCCccCHhHHhcCCCCcEEEccCCCCccccc
Q psy4626 278 AKYMGLNK--AGPFKPSYYSMDGFS-VVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGHSNTEIDV 350 (542)
Q Consensus 278 a~~lg~~e--~~p~~a~ea~mdG~~-v~~~~~a~~~~d~~~t~t----g~~~vi~~~~~~~mk~gail~n~gh~~~Ei~~ 350 (542)
++.+|+.. .||...- .+|+. ..+++++++++|+|+.++ .++++|+.+.|+.||+|++++|++++.. +|.
T Consensus 183 l~~~G~~V~~~dr~~~~---~~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~-vd~ 258 (333)
T 3ba1_A 183 AEAFDCPISYFSRSKKP---NTNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPH-VDE 258 (333)
T ss_dssp HHTTTCCEEEECSSCCT---TCCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGG-BCH
T ss_pred HHHCCCEEEEECCCchh---ccCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCch-hCH
Confidence 99998832 2332221 12655 347899999999999954 4689999999999999999999999875 344
Q ss_pred cccc
Q psy4626 351 NSLR 354 (542)
Q Consensus 351 ~~l~ 354 (542)
++|.
T Consensus 259 ~aL~ 262 (333)
T 3ba1_A 259 PELV 262 (333)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 178
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=98.15 E-value=4.6e-06 Score=85.27 Aligned_cols=89 Identities=12% Similarity=0.162 Sum_probs=70.8
Q ss_pred cEEEEEcCChhHHHHHHHHHhCC-CEEEEEeCCc-------hhhhhhhcCCceee-CHHHHhcCCcEEEEcCCCcccCC-
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLG-CVIYITEIDP-------ICALQACMDGFSVV-KLNEVIRTVDIVVTATGNKNVVT- 147 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~G-a~Viv~d~dp-------~r~~~A~~~G~~v~-~l~e~l~~aDvVi~atG~~~lI~- 147 (542)
++|+|||+|.+|..+|..|...| .+|+++|+++ .+.......|. .. ++.++++++|+||.|..+.....
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~~~s~~e~~~~aDvVi~avp~~~~~~~ 103 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-EPLDDVAGIACADVVLSLVVGAATKAV 103 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-EEESSGGGGGGCSEEEECCCGGGHHHH
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-CCCCHHHHHhcCCEEEEecCCHHHHHH
Confidence 68999999999999999999999 8999999987 33333445576 66 78889999999999986543332
Q ss_pred -HHHHhccCCCeEEEeccCCC
Q psy4626 148 -REHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 148 -~e~l~~mk~GailvnvG~g~ 167 (542)
.+..+.++++.++++++...
T Consensus 104 ~~~i~~~l~~~~ivv~~st~~ 124 (317)
T 4ezb_A 104 AASAAPHLSDEAVFIDLNSVG 124 (317)
T ss_dssp HHHHGGGCCTTCEEEECCSCC
T ss_pred HHHHHhhcCCCCEEEECCCCC
Confidence 34456789999999988654
No 179
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=98.15 E-value=5.1e-06 Score=86.70 Aligned_cols=94 Identities=16% Similarity=0.229 Sum_probs=74.3
Q ss_pred ccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCC---cEEEEcCCCcccCC-
Q psy4626 73 VMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTV---DIVVTATGNKNVVT- 147 (542)
Q Consensus 73 ~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~a---DvVi~atG~~~lI~- 147 (542)
.++.+++|+|||+|.+|..+|+.|...|.+|+++|+++.+.......|... .++++++..+ |+||.++... .+.
T Consensus 18 ~Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~ 96 (358)
T 4e21_A 18 LYFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDS 96 (358)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHH
T ss_pred hhhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHH
Confidence 456678999999999999999999999999999999998877666667654 4778888777 9999998654 221
Q ss_pred --HHHHhccCCCeEEEeccCCC
Q psy4626 148 --REHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 148 --~e~l~~mk~GailvnvG~g~ 167 (542)
.+.+..+++|.++++++...
T Consensus 97 vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 97 MLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHHHHGGGCCTTCEEEECSSCC
T ss_pred HHHHHHhhCCCCCEEEeCCCCC
Confidence 24456789999999998775
No 180
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.14 E-value=4.6e-06 Score=80.35 Aligned_cols=90 Identities=12% Similarity=0.227 Sum_probs=69.7
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCCCcccCCHHH--Hhc
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATGNKNVVTREH--MDK 153 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~--l~~ 153 (542)
.+++++|+|+|.+|..++..+...|.+|+++++++.+.......|....+.+++++++|+||.|+.... +. +. +..
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~~~-~~-~v~~l~~ 104 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFREH-YS-SLCSLSD 104 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCGGG-SG-GGGGGHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCChHH-HH-HHHHHHH
Confidence 356899999999999999999999999999999988766555557776678888899999999986432 21 22 222
Q ss_pred cCCCeEEEeccCCC
Q psy4626 154 MKNGCVVCNMGHSN 167 (542)
Q Consensus 154 mk~GailvnvG~g~ 167 (542)
+.++.++++++.+.
T Consensus 105 ~~~~~~vv~~s~g~ 118 (215)
T 2vns_A 105 QLAGKILVDVSNPT 118 (215)
T ss_dssp HHTTCEEEECCCCC
T ss_pred hcCCCEEEEeCCCc
Confidence 33789999998874
No 181
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=98.14 E-value=3.1e-06 Score=86.55 Aligned_cols=103 Identities=17% Similarity=0.167 Sum_probs=78.5
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh-cCCce-eeC------HHHHh-
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQAC-MDGFS-VVK------LNEVI- 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~-~~G~~-v~~------l~e~l- 130 (542)
...|+++.+..+ ...|++|+|+|. |.||+.+++.++..|++|+++++++.+...+. ..|.. +++ +.+.+
T Consensus 141 ~ta~~al~~~~~-~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~ 219 (345)
T 2j3h_A 141 MTAYAGFYEVCS-PKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALK 219 (345)
T ss_dssp HHHHHHHHTTSC-CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHH
T ss_pred HHHHHHHHHHhC-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHH
Confidence 345667644322 457999999997 99999999999999999999999988877666 56764 222 22222
Q ss_pred ----cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 131 ----RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 131 ----~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
.+.|++|+++|.. .+ ...++.+++++.++.+|..
T Consensus 220 ~~~~~~~d~vi~~~g~~-~~-~~~~~~l~~~G~~v~~G~~ 257 (345)
T 2j3h_A 220 RCFPNGIDIYFENVGGK-ML-DAVLVNMNMHGRIAVCGMI 257 (345)
T ss_dssp HHCTTCEEEEEESSCHH-HH-HHHHTTEEEEEEEEECCCG
T ss_pred HHhCCCCcEEEECCCHH-HH-HHHHHHHhcCCEEEEEccc
Confidence 3689999999873 44 4789999999999998864
No 182
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=98.14 E-value=4.1e-06 Score=85.01 Aligned_cols=90 Identities=17% Similarity=0.203 Sum_probs=69.4
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcc----cCCHHHHh
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKN----VVTREHMD 152 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~----lI~~e~l~ 152 (542)
++|++||.|.+|..+|+.|...|.+|++||+++.+.......|... .++.++++.+|+||.+..+.. ++..+.+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 5799999999999999999999999999999998877666778765 468889999999999876543 33345677
Q ss_pred ccCCCeEEEeccCCC
Q psy4626 153 KMKNGCVVCNMGHSN 167 (542)
Q Consensus 153 ~mk~GailvnvG~g~ 167 (542)
.+++|.++|+.+...
T Consensus 86 ~~~~~~iiid~sT~~ 100 (297)
T 4gbj_A 86 KLGKDGVHVSMSTIS 100 (297)
T ss_dssp HHCTTCEEEECSCCC
T ss_pred hcCCCeEEEECCCCC
Confidence 899999999988764
No 183
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.14 E-value=8.9e-06 Score=73.90 Aligned_cols=71 Identities=17% Similarity=0.191 Sum_probs=56.4
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh-cCCceee--C------HHHH-hcCCcEEEEcCCCc
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQAC-MDGFSVV--K------LNEV-IRTVDIVVTATGNK 143 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~-~~G~~v~--~------l~e~-l~~aDvVi~atG~~ 143 (542)
...+++|+|+|+|.+|+.+++.|+..|.+|+++|+++.+...+. ..|..++ + +.++ +.++|+||.++++.
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~ 95 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD 95 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence 45789999999999999999999999999999999998876655 5565433 1 1222 57899999999875
Q ss_pred c
Q psy4626 144 N 144 (542)
Q Consensus 144 ~ 144 (542)
.
T Consensus 96 ~ 96 (155)
T 2g1u_A 96 S 96 (155)
T ss_dssp H
T ss_pred H
Confidence 4
No 184
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=98.13 E-value=8.5e-06 Score=82.77 Aligned_cols=103 Identities=21% Similarity=0.270 Sum_probs=78.2
Q ss_pred HHHHHHHHhhcCccccCcEEEEEc-CChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCH-----HH-H---
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCG-YGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKL-----NE-V--- 129 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG-~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l-----~e-~--- 129 (542)
...|+++.+.. ....|++|+|+| .|.||+.+++.++..|++|+++++++.+...+...|.+ +.+. .+ +
T Consensus 126 ~ta~~al~~~~-~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 204 (327)
T 1qor_A 126 LTVYYLLRKTY-EIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEI 204 (327)
T ss_dssp HHHHHHHHTTS-CCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHHhh-CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHH
Confidence 34567765332 245799999999 69999999999999999999999998877666666654 2221 11 1
Q ss_pred h--cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 130 I--RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 130 l--~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
. .+.|++|+++| ...+ ...++.+++++.++.+|..
T Consensus 205 ~~~~~~D~vi~~~g-~~~~-~~~~~~l~~~G~iv~~g~~ 241 (327)
T 1qor_A 205 TGGKKVRVVYDSVG-RDTW-ERSLDCLQRRGLMVSFGNS 241 (327)
T ss_dssp TTTCCEEEEEECSC-GGGH-HHHHHTEEEEEEEEECCCT
T ss_pred hCCCCceEEEECCc-hHHH-HHHHHHhcCCCEEEEEecC
Confidence 1 25899999999 4455 4789999999999999865
No 185
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=98.12 E-value=1.8e-05 Score=82.17 Aligned_cols=90 Identities=16% Similarity=0.070 Sum_probs=73.5
Q ss_pred ccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCH-----HHHh-----cCCcEEEEcCCC
Q psy4626 75 FGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKL-----NEVI-----RTVDIVVTATGN 142 (542)
Q Consensus 75 l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l-----~e~l-----~~aDvVi~atG~ 142 (542)
..|++|+|+|. |.+|+.+++.++.+|++|+++. ++.+...+...|++ +++. .+.+ .++|++++|+|.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~ 241 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN 241 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCS
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCc
Confidence 57999999999 8999999999999999999885 78888888888876 3332 2222 359999999998
Q ss_pred cccCCHHHHhcc-CCCeEEEeccCC
Q psy4626 143 KNVVTREHMDKM-KNGCVVCNMGHS 166 (542)
Q Consensus 143 ~~lI~~e~l~~m-k~GailvnvG~g 166 (542)
...+. ..++.+ ++++.++.+|..
T Consensus 242 ~~~~~-~~~~~l~~~~G~iv~~g~~ 265 (371)
T 3gqv_A 242 VESTT-FCFAAIGRAGGHYVSLNPF 265 (371)
T ss_dssp HHHHH-HHHHHSCTTCEEEEESSCC
T ss_pred hHHHH-HHHHHhhcCCCEEEEEecC
Confidence 76664 678888 699999999854
No 186
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=98.12 E-value=6.7e-06 Score=83.72 Aligned_cols=90 Identities=16% Similarity=0.249 Sum_probs=73.9
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcccCCH------HH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKNVVTR------EH 150 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~~------e~ 150 (542)
++|++||.|.+|..+|+.|...|.+|++||+++.+.......|... .++.++++.+|+||+|..+...+.. ..
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 5899999999999999999999999999999999887777778764 4788999999999998765544421 13
Q ss_pred HhccCCCeEEEeccCCC
Q psy4626 151 MDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 151 l~~mk~GailvnvG~g~ 167 (542)
++.+++|.++|+.+..+
T Consensus 84 ~~~~~~g~iiId~sT~~ 100 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIA 100 (300)
T ss_dssp TTSCCC-CEEEECSCCC
T ss_pred hhcCCCCCEEEECCCCC
Confidence 45688999999999774
No 187
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=98.12 E-value=4.7e-06 Score=84.81 Aligned_cols=106 Identities=20% Similarity=0.181 Sum_probs=78.9
Q ss_pred ccCc-EEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCHHHH----h-----cCCcEEEEcCCC
Q psy4626 75 FGGK-QVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKLNEV----I-----RTVDIVVTATGN 142 (542)
Q Consensus 75 l~Gk-tVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l~e~----l-----~~aDvVi~atG~ 142 (542)
.+|+ +|+|+|. |.+|+.+++.++.+|++|++++.++.+...+...|++ +++..+. + .++|++|+|+|.
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~ 227 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGG 227 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCT
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcH
Confidence 4575 8999998 9999999999999999999999988887777777765 3443221 1 358999999997
Q ss_pred cccCCHHHHhccCCCeEEEeccCCC---cccChHhhcCCCcce
Q psy4626 143 KNVVTREHMDKMKNGCVVCNMGHSN---TEIDVNSLRTPDLTW 182 (542)
Q Consensus 143 ~~lI~~e~l~~mk~GailvnvG~g~---~eid~~aL~~~~l~v 182 (542)
. .+ .+.++.+++++.++.+|... .++++..+..+++++
T Consensus 228 ~-~~-~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i 268 (330)
T 1tt7_A 228 K-QL-ASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSL 268 (330)
T ss_dssp H-HH-HHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEE
T ss_pred H-HH-HHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEE
Confidence 4 45 47899999999999998643 234444443344433
No 188
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.12 E-value=5.5e-06 Score=84.14 Aligned_cols=163 Identities=17% Similarity=0.178 Sum_probs=104.0
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.++++|+++. .+.+ + .+++-..+...|.|-+.+|++++.++.+ +..
T Consensus 30 ~~~~~ad~li~-~~~~--~------~~~~Lk~I~~~~~G~d~id~~~~~~~~~---------------------~~~--- 76 (290)
T 3gvx_A 30 PDYYDAEAQVI-KDRY--V------LGKRTKMIQAISAGVDHIDVNGIPENVV---------------------LCS--- 76 (290)
T ss_dssp TSCCCCSEEEE-SSCC--C------CCSSCCEEEECSSCCTTSCGGGSCTTSE---------------------EEC---
T ss_pred cchhhhhhhhh-hhhh--h------hhhhhHHHHHHhcCCceeecCCCccceE---------------------Eee---
Confidence 55688999987 3332 2 5677778888898877788877653211 110
Q ss_pred cccccCCCChhHHHhhHHHHHHHHHH-----------HHhcCCCCCCCCccccCChhhHHHHHHhcCCcccc----cccc
Q psy4626 208 LVNLSCSSLPSFVVSITACTQALALI-----------ELFNAPSGRYKSDVYLLPKKMDEYVASLHLPTFDA----HLTE 272 (542)
Q Consensus 208 Lvnl~~~thp~~vmd~sfa~q~la~~-----------~L~~~~~~~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~ 272 (542)
| | -....+.|..+++.+ ..... ++|....+ -++..+++|+ .|++
T Consensus 77 --~------~-~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~--g~w~~~~~----------~~l~g~tvGIIGlG~IG~ 135 (290)
T 3gvx_A 77 --N------A-GAYSISVAEHAFALLLAHAKNILENNELMKA--GIFRQSPT----------TLLYGKALGILGYGGIGR 135 (290)
T ss_dssp --C------H-HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHT--TCCCCCCC----------CCCTTCEEEEECCSHHHH
T ss_pred --c------C-CcceeeHHHHHHHHHHHHHHhhhhhhhHhhh--cccccCCc----------eeeecchheeeccCchhH
Confidence 1 0 011123333333322 11222 46654311 1344566666 8888
Q ss_pred ccHHHHhhcCCCC--CCCCCCCccccCCeeee-ehhhhcccCcEEEE----ccCCCCccCHhHHhcCCCCcEEEccCCCC
Q psy4626 273 LSDEQAKYMGLNK--AGPFKPSYYSMDGFSVV-KLNEVIRTVDIVVT----ATGNKNVVTREHMDKMKNGCVVCNMGHSN 345 (542)
Q Consensus 273 lt~~~a~~lg~~e--~~p~~a~ea~mdG~~v~-~~~~a~~~~d~~~t----~tg~~~vi~~~~~~~mk~gail~n~gh~~ 345 (542)
..+++++.+|+.. .||...-.. .++.. +++|+++++|+|++ +..++++|+.+.|+.||+|++++|+|++.
T Consensus 136 ~vA~~l~~~G~~V~~~dr~~~~~~---~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~ 212 (290)
T 3gvx_A 136 RVAHLAKAFGMRVIAYTRSSVDQN---VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARAD 212 (290)
T ss_dssp HHHHHHHHHTCEEEEECSSCCCTT---CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGG
T ss_pred HHHHHHHhhCcEEEEEeccccccc---cccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhc
Confidence 8999999999832 233322211 13333 89999999999999 34578999999999999999999999998
Q ss_pred cc
Q psy4626 346 TE 347 (542)
Q Consensus 346 ~E 347 (542)
.-
T Consensus 213 ~v 214 (290)
T 3gvx_A 213 VV 214 (290)
T ss_dssp GB
T ss_pred cc
Confidence 63
No 189
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=98.11 E-value=4.6e-06 Score=86.46 Aligned_cols=103 Identities=19% Similarity=0.173 Sum_probs=79.3
Q ss_pred HHHHHHHHhhcCccccCcEEEEEc-CChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eC-----HHHHh---
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCG-YGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VK-----LNEVI--- 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG-~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~-----l~e~l--- 130 (542)
...|+++.+.. ....|++|+|+| .|.||+.+++.++.+|++|+++++++.+...+...|++. ++ ..+.+
T Consensus 149 ~ta~~al~~~~-~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~ 227 (362)
T 2c0c_A 149 TTAYISLKELG-GLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQE 227 (362)
T ss_dssp HHHHHHHHHHT-CCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHh
Confidence 34556665432 245799999999 799999999999999999999999988877777777652 22 22222
Q ss_pred --cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 131 --RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 131 --~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
.++|++|+|+|.. .+ ...++.+++++.++.+|..
T Consensus 228 ~~~g~D~vid~~g~~-~~-~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 228 YPEGVDVVYESVGGA-MF-DLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp CTTCEEEEEECSCTH-HH-HHHHHHEEEEEEEEECCCG
T ss_pred cCCCCCEEEECCCHH-HH-HHHHHHHhcCCEEEEEeCC
Confidence 3689999999873 44 4688999999999999864
No 190
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.10 E-value=5.8e-06 Score=82.76 Aligned_cols=90 Identities=19% Similarity=0.297 Sum_probs=71.4
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcccCC------HHH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKNVVT------REH 150 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~------~e~ 150 (542)
.+|+|+|+|.+|..++..+...|.+|+++|+++.+.......|... .+++++++++|+||.|+.++..+. .+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 4799999999999999999999999999999998776555557654 467788889999999987543222 122
Q ss_pred HhccCCCeEEEeccCCC
Q psy4626 151 MDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 151 l~~mk~GailvnvG~g~ 167 (542)
.+.+++|.++++++.+.
T Consensus 86 ~~~l~~~~~vv~~s~~~ 102 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIA 102 (299)
T ss_dssp HHHCCTTCEEEECSCCC
T ss_pred hhcCCCCCEEEECCCCC
Confidence 35688999999998764
No 191
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=98.07 E-value=5.2e-06 Score=84.38 Aligned_cols=90 Identities=18% Similarity=0.192 Sum_probs=71.8
Q ss_pred ccCc-EEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeCH----HHH---h--cCCcEEEEcCCC
Q psy4626 75 FGGK-QVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVKL----NEV---I--RTVDIVVTATGN 142 (542)
Q Consensus 75 l~Gk-tVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~l----~e~---l--~~aDvVi~atG~ 142 (542)
.+|+ +|+|+|. |.+|+.+++.++.+|++|++++.++.+...+...|++ +++. .+. + .++|++|+++|.
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~ 226 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG 226 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH
Confidence 4565 8999998 9999999999999999999999988888777778865 2221 111 1 368999999987
Q ss_pred cccCCHHHHhccCCCeEEEeccCC
Q psy4626 143 KNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 143 ~~lI~~e~l~~mk~GailvnvG~g 166 (542)
. .+ .+.++.+++++.++.+|..
T Consensus 227 ~-~~-~~~~~~l~~~G~~v~~G~~ 248 (328)
T 1xa0_A 227 R-TL-ATVLSRMRYGGAVAVSGLT 248 (328)
T ss_dssp T-TH-HHHHHTEEEEEEEEECSCC
T ss_pred H-HH-HHHHHhhccCCEEEEEeec
Confidence 4 45 4789999999999999865
No 192
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=98.07 E-value=1.6e-05 Score=80.81 Aligned_cols=89 Identities=25% Similarity=0.460 Sum_probs=73.4
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCCh-hHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEc
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGE-VGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTA 139 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~-IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~a 139 (542)
.++++-+ +..+..+.||+++|+|-+. +|+-+|..|...||+|++++.. ..++.+.++.|||+|.+
T Consensus 164 ~gv~~lL-~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~-------------T~dl~~~~~~ADIvV~A 229 (303)
T 4b4u_A 164 AGIMTIL-KENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSR-------------TQNLPELVKQADIIVGA 229 (303)
T ss_dssp HHHHHHH-HHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT-------------CSSHHHHHHTCSEEEEC
T ss_pred HHHHHHH-HHHCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCC-------------CCCHHHHhhcCCeEEec
Confidence 4444433 3456789999999999875 6999999999999999999732 24677888999999999
Q ss_pred CCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 140 TGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 140 tG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
.|.+++|+.+ ++|+|+++|++|..
T Consensus 230 ~G~p~~i~~d---~vk~GavVIDVGin 253 (303)
T 4b4u_A 230 VGKAELIQKD---WIKQGAVVVDAGFH 253 (303)
T ss_dssp SCSTTCBCGG---GSCTTCEEEECCCB
T ss_pred cCCCCccccc---cccCCCEEEEecee
Confidence 9999999854 57999999999954
No 193
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=98.07 E-value=8.5e-06 Score=84.04 Aligned_cols=112 Identities=17% Similarity=0.103 Sum_probs=79.3
Q ss_pred HHHHHHHhhcCccccC-cEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchh----hhhhhcCCce-eeCHHH------
Q psy4626 62 SIIDSLKRSTDVMFGG-KQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPIC----ALQACMDGFS-VVKLNE------ 128 (542)
Q Consensus 62 s~~~ai~r~~~~~l~G-ktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r----~~~A~~~G~~-v~~l~e------ 128 (542)
..|+++.+..+ ..+| ++|+|.|. |.+|+.+++.++.+|++|+++..++.+ ...+...|++ +++..+
T Consensus 153 ta~~~l~~~~~-~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~ 231 (364)
T 1gu7_A 153 TAYLMLTHYVK-LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREF 231 (364)
T ss_dssp HHHHHHHSSSC-CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGG
T ss_pred HHHHHHHHhhc-cCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHH
Confidence 44666665322 3478 99999998 999999999999999998888655543 3445566765 333221
Q ss_pred --Hh--------cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC---cccChHhhc
Q psy4626 129 --VI--------RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN---TEIDVNSLR 176 (542)
Q Consensus 129 --~l--------~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~---~eid~~aL~ 176 (542)
.+ .++|++|+|+|..... +.++.+++++.++.+|... ..++...+.
T Consensus 232 ~~~i~~~t~~~~~g~Dvvid~~G~~~~~--~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 290 (364)
T 1gu7_A 232 GPTIKEWIKQSGGEAKLALNCVGGKSST--GIARKLNNNGLMLTYGGMSFQPVTIPTSLYI 290 (364)
T ss_dssp HHHHHHHHHHHTCCEEEEEESSCHHHHH--HHHHTSCTTCEEEECCCCSSCCEEECHHHHH
T ss_pred HHHHHHHhhccCCCceEEEECCCchhHH--HHHHHhccCCEEEEecCCCCCCcccCHHHHh
Confidence 11 2689999999976554 5789999999999998642 334544443
No 194
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=98.06 E-value=1.2e-05 Score=81.99 Aligned_cols=103 Identities=19% Similarity=0.172 Sum_probs=78.3
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeC------HHHHh--
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVK------LNEVI-- 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~------l~e~l-- 130 (542)
...|+++.+.. ....|++|+|+|. |.||+.+++.++..|++|+++++++.+...+...|.. +.+ ..+.+
T Consensus 131 ~ta~~al~~~~-~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~ 209 (333)
T 1v3u_A 131 LTAYFGLLEVC-GVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKK 209 (333)
T ss_dssp HHHHHHHHTTS-CCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHH
T ss_pred HHHHHHHHHhh-CCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHH
Confidence 34566764432 2457999999998 9999999999999999999999988877766666653 222 22222
Q ss_pred ---cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 131 ---RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 131 ---~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
.+.|++|+++|.. .+ .+.++.+++++.++.+|..
T Consensus 210 ~~~~~~d~vi~~~g~~-~~-~~~~~~l~~~G~~v~~g~~ 246 (333)
T 1v3u_A 210 ASPDGYDCYFDNVGGE-FL-NTVLSQMKDFGKIAICGAI 246 (333)
T ss_dssp HCTTCEEEEEESSCHH-HH-HHHHTTEEEEEEEEECCCC
T ss_pred HhCCCCeEEEECCChH-HH-HHHHHHHhcCCEEEEEecc
Confidence 2589999999874 34 4788999999999999864
No 195
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=98.06 E-value=1.9e-05 Score=81.46 Aligned_cols=117 Identities=17% Similarity=0.166 Sum_probs=79.2
Q ss_pred HHHHHHHhhcCccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEE-eCCch---hhhhhhcCCce-eeCHH--------
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYIT-EIDPI---CALQACMDGFS-VVKLN-------- 127 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~-d~dp~---r~~~A~~~G~~-v~~l~-------- 127 (542)
..|+++.+.. ...+|++|+|.|. |.+|+.+++.++.+|++|+++ +.++. +...+...|++ +++..
T Consensus 154 ta~~~l~~~~-~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~ 232 (357)
T 1zsy_A 154 TAYRMLMDFE-QLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMK 232 (357)
T ss_dssp HHHHHHHHSS-CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGG
T ss_pred HHHHHHHHHh-ccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHH
Confidence 4566665432 2457999999998 999999999999999987665 44332 33456677875 34432
Q ss_pred HHhc---CCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCC---CcccChHhhcCCCcc
Q psy4626 128 EVIR---TVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHS---NTEIDVNSLRTPDLT 181 (542)
Q Consensus 128 e~l~---~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g---~~eid~~aL~~~~l~ 181 (542)
+... ++|++|+|+|.... .+.++.+++++.++.+|.. +..++...+..++++
T Consensus 233 ~~~~~~~~~Dvvid~~g~~~~--~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~ 290 (357)
T 1zsy_A 233 NFFKDMPQPRLALNCVGGKSS--TELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLK 290 (357)
T ss_dssp GTTSSSCCCSEEEESSCHHHH--HHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCE
T ss_pred HHHhCCCCceEEEECCCcHHH--HHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCce
Confidence 1122 48999999997654 3589999999999998743 234444444333333
No 196
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=98.03 E-value=8.8e-06 Score=82.86 Aligned_cols=91 Identities=13% Similarity=0.221 Sum_probs=71.6
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCC--chhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcccCC--HHH
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEID--PICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKNVVT--REH 150 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~d--p~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~--~e~ 150 (542)
-.+|+|||+|.+|..+|+.|...|. +|+++|++ +.+...+...|... .++.++++.+|+||.|+.+..... .+.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~~~~l 103 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALEVAQQA 103 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHHHHHhh
Confidence 4689999999999999999999999 99999997 35555555667765 467888999999999986543321 244
Q ss_pred HhccCCCeEEEeccCCC
Q psy4626 151 MDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 151 l~~mk~GailvnvG~g~ 167 (542)
.+.++++.++++++...
T Consensus 104 ~~~l~~~~ivvd~st~~ 120 (312)
T 3qsg_A 104 GPHLCEGALYADFTSCS 120 (312)
T ss_dssp GGGCCTTCEEEECCCCC
T ss_pred HhhcCCCCEEEEcCCCC
Confidence 56788999999888654
No 197
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.01 E-value=5.4e-06 Score=82.35 Aligned_cols=88 Identities=14% Similarity=0.056 Sum_probs=67.6
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCCCcccCC---HHHHhccC
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATGNKNVVT---REHMDKMK 155 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~---~e~l~~mk 155 (542)
+|+|+|+|.+|..++..+.. |.+|+++|+++.+.......|....++++++..+|+||.|+.....+. .+..+.++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~l~ 81 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR 81 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHHHHHHhhCC
Confidence 69999999999999999999 999999999988765544445544446677889999999987553221 12335678
Q ss_pred CCeEEEeccCCC
Q psy4626 156 NGCVVCNMGHSN 167 (542)
Q Consensus 156 ~GailvnvG~g~ 167 (542)
+|.++++++...
T Consensus 82 ~~~~vv~~s~~~ 93 (289)
T 2cvz_A 82 EGTYWVDATSGE 93 (289)
T ss_dssp TTEEEEECSCCC
T ss_pred CCCEEEECCCCC
Confidence 999999887654
No 198
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.00 E-value=3e-05 Score=77.41 Aligned_cols=103 Identities=19% Similarity=0.305 Sum_probs=71.6
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhh-hhcCC----ceeeCHHHHh-cCCc
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQ-ACMDG----FSVVKLNEVI-RTVD 134 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~-A~~~G----~~v~~l~e~l-~~aD 134 (542)
.+++.++.+. +..+.|++++|+|.|.+|+.++..|...|++|+++++++.++.. +...+ ..+.+.+++. .++|
T Consensus 104 ~G~~~~L~~~-~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~D 182 (271)
T 1nyt_A 104 VGLLSDLERL-SFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFD 182 (271)
T ss_dssp HHHHHHHHHH-TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCS
T ss_pred HHHHHHHHhc-CcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCC
Confidence 4444555443 34578999999999999999999999999999999999876542 22222 2233433333 5899
Q ss_pred EEEEcCCCccc-----CCHHHHhccCCCeEEEeccCCC
Q psy4626 135 IVVTATGNKNV-----VTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 135 vVi~atG~~~l-----I~~e~l~~mk~GailvnvG~g~ 167 (542)
+||+++|.... +. .+.++++.+++++...+
T Consensus 183 ivVn~t~~~~~~~~~~i~---~~~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 183 LIINATSSGISGDIPAIP---SSLIHPGIYCYDMFYQK 217 (271)
T ss_dssp EEEECCSCGGGTCCCCCC---GGGCCTTCEEEESCCCS
T ss_pred EEEECCCCCCCCCCCCCC---HHHcCCCCEEEEeccCC
Confidence 99999875432 32 12357888888877654
No 199
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.00 E-value=3.5e-05 Score=78.21 Aligned_cols=105 Identities=15% Similarity=0.225 Sum_probs=72.6
Q ss_pred HHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhh-hhcCCc---eeeC---HHHHhcCCc
Q psy4626 63 IIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQ-ACMDGF---SVVK---LNEVIRTVD 134 (542)
Q Consensus 63 ~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~-A~~~G~---~v~~---l~e~l~~aD 134 (542)
+..++.+.....+.|++++|+|+|.+|+.++..|...|+ +|+++++++.++.. +...+. .+.+ +.+.+.++|
T Consensus 127 ~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aD 206 (297)
T 2egg_A 127 YVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYD 206 (297)
T ss_dssp HHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCS
T ss_pred HHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCC
Confidence 334444332145789999999999999999999999998 99999999877543 333333 3433 445678999
Q ss_pred EEEEcCCCccc--CC--HHHHhccCCCeEEEeccCCC
Q psy4626 135 IVVTATGNKNV--VT--REHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 135 vVi~atG~~~l--I~--~e~l~~mk~GailvnvG~g~ 167 (542)
+||+|++.... .. .-..+.++++.+++++...+
T Consensus 207 ivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P 243 (297)
T 2egg_A 207 IIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNP 243 (297)
T ss_dssp EEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCSS
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCCC
Confidence 99999864321 00 00134578888988887643
No 200
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=97.99 E-value=7.1e-06 Score=88.55 Aligned_cols=91 Identities=22% Similarity=0.295 Sum_probs=71.1
Q ss_pred cccC-cEEEEEcCChhHHHHHHHHHhC------CCEEEEEeCCch-hhhhhhcCCcee-----eCHHHHhcCCcEEEEcC
Q psy4626 74 MFGG-KQVVLCGYGEVGKGCCQSLKGL------GCVIYITEIDPI-CALQACMDGFSV-----VKLNEVIRTVDIVVTAT 140 (542)
Q Consensus 74 ~l~G-ktVvViG~G~IG~~vA~~l~~~------Ga~Viv~d~dp~-r~~~A~~~G~~v-----~~l~e~l~~aDvVi~at 140 (542)
.+.| ++|+|||+|.+|..+|+.|+.. |.+|++.+++.. ....|...|+.+ .++.+++++||+||.++
T Consensus 50 ~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaV 129 (525)
T 3fr7_A 50 AFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLI 129 (525)
T ss_dssp HTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECS
T ss_pred HhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECC
Confidence 3678 9999999999999999999988 999988765543 344566778764 67889999999999987
Q ss_pred CCc---ccCCHHHHhccCCCeEEEeccCC
Q psy4626 141 GNK---NVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 141 G~~---~lI~~e~l~~mk~GailvnvG~g 166 (542)
... .++. +.+..||+|++++. .+|
T Consensus 130 P~~~~~eVl~-eI~p~LK~GaILs~-AaG 156 (525)
T 3fr7_A 130 SDAAQADNYE-KIFSHMKPNSILGL-SHG 156 (525)
T ss_dssp CHHHHHHHHH-HHHHHSCTTCEEEE-SSS
T ss_pred ChHHHHHHHH-HHHHhcCCCCeEEE-eCC
Confidence 532 3453 67788999998644 444
No 201
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=97.99 E-value=1.7e-05 Score=81.74 Aligned_cols=181 Identities=15% Similarity=0.207 Sum_probs=111.3
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhcc-CCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKM-KNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEG 206 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~m-k~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~G 206 (542)
+.++++|+++..... -++++.++.+ ++-..+...|.|-+.+|++++.++++.+....
T Consensus 49 ~~~~~~d~~~~~~~~--~~~~~~l~~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~-------------------- 106 (330)
T 2gcg_A 49 RGVAGAHGLLCLLSD--HVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTP-------------------- 106 (330)
T ss_dssp HHHTTCSEEEECTTS--CBCHHHHHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCC--------------------
T ss_pred HHhcCCeEEEECCCC--CCCHHHHHhcCCCceEEEECCcccccccHHHHHhCCceEEeCC--------------------
Confidence 446789998864332 3677889988 88888889999988899988875544333221
Q ss_pred CcccccCCCChhHHHh------hHHHHHHHHHHHHhcCCCCCCCCc--cccCChhhHHHHHHhcCCcccc----cccccc
Q psy4626 207 RLVNLSCSSLPSFVVS------ITACTQALALIELFNAPSGRYKSD--VYLLPKKMDEYVASLHLPTFDA----HLTELS 274 (542)
Q Consensus 207 rLvnl~~~thp~~vmd------~sfa~q~la~~~L~~~~~~~~~~g--v~~lp~~~d~~VA~l~L~~lg~----~i~~lt 274 (542)
.. +...+-+ ++++.++.......+. ++|... ...... ++...++|+ .+++..
T Consensus 107 ------~~-~~~~vAe~~~~~~L~~~R~~~~~~~~~~~--~~w~~~~~~~~~~~-------~l~g~~vgIIG~G~iG~~i 170 (330)
T 2gcg_A 107 ------DV-LTDTTAELAVSLLLTTCRRLPEAIEEVKN--GGWTSWKPLWLCGY-------GLTQSTVGIIGLGRIGQAI 170 (330)
T ss_dssp ------ST-THHHHHHHHHHHHHHHHTTHHHHHHHHHT--TCCCSCCTTSSCBC-------CCTTCEEEEECCSHHHHHH
T ss_pred ------CC-ChHHHHHHHHHHHHHHHhCHHHHHHHHHc--CCCcccCcccccCc-------CCCCCEEEEECcCHHHHHH
Confidence 00 1111111 1111111111122222 456421 000001 223344554 777778
Q ss_pred HHHHhhcCCCC--CC--CCCCCccccCCeeeeehhhhcccCcEEEEcc----CCCCccCHhHHhcCCCCcEEEccCCCCc
Q psy4626 275 DEQAKYMGLNK--AG--PFKPSYYSMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGHSNT 346 (542)
Q Consensus 275 ~~~a~~lg~~e--~~--p~~a~ea~mdG~~v~~~~~a~~~~d~~~t~t----g~~~vi~~~~~~~mk~gail~n~gh~~~ 346 (542)
+++++.+|+.. .| +.+..++.-.|....+++++++.+|+|+.++ .++++|+.+.++.||+|++++|++++..
T Consensus 171 A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~ 250 (330)
T 2gcg_A 171 ARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDV 250 (330)
T ss_dssp HHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGG
T ss_pred HHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcc
Confidence 88888888742 23 3222222234666668899999999999955 4688999999999999999999999865
No 202
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=97.98 E-value=1.5e-05 Score=78.18 Aligned_cols=92 Identities=21% Similarity=0.368 Sum_probs=66.1
Q ss_pred ccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchh--------------hhh-hhcCC-ceeeCHHHHhcCCcEE
Q psy4626 73 VMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPIC--------------ALQ-ACMDG-FSVVKLNEVIRTVDIV 136 (542)
Q Consensus 73 ~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r--------------~~~-A~~~G-~~v~~l~e~l~~aDvV 136 (542)
..+.+++++|+|+|.+|..+|+.|...|.+|+++|+++.+ ... +...| ....+..++++++|+|
T Consensus 15 ~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDvV 94 (245)
T 3dtt_A 15 LYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAELV 94 (245)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSEE
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCEE
Confidence 4577999999999999999999999999999999999886 222 12223 3456778889999999
Q ss_pred EEcCCCcccCC--HHH-HhccCCCeEEEeccC
Q psy4626 137 VTATGNKNVVT--REH-MDKMKNGCVVCNMGH 165 (542)
Q Consensus 137 i~atG~~~lI~--~e~-l~~mk~GailvnvG~ 165 (542)
|.|+....... .+. ...+ ++.++++++-
T Consensus 95 ilavp~~~~~~~~~~i~~~~l-~g~ivi~~s~ 125 (245)
T 3dtt_A 95 VNATEGASSIAALTAAGAENL-AGKILVDIAN 125 (245)
T ss_dssp EECSCGGGHHHHHHHHCHHHH-TTSEEEECCC
T ss_pred EEccCcHHHHHHHHHhhhhhc-CCCEEEECCC
Confidence 99986543321 111 1233 7899999883
No 203
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=97.98 E-value=1.8e-05 Score=79.14 Aligned_cols=90 Identities=20% Similarity=0.300 Sum_probs=70.4
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcccCCH------HH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKNVVTR------EH 150 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~~------e~ 150 (542)
.+|+|+|+|.+|..++..+...|.+|+++|+++.+.......|... .++++++..+|+||.|+..+..+.. +.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 5899999999999999999999999999999988766555557654 3677888899999999854332210 22
Q ss_pred HhccCCCeEEEeccCCC
Q psy4626 151 MDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 151 l~~mk~GailvnvG~g~ 167 (542)
...++++.++++++.+.
T Consensus 85 ~~~l~~~~~vv~~~~~~ 101 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVS 101 (301)
T ss_dssp HHHSCTTCEEEECCCCC
T ss_pred hhcCCCCCEEEECCCCC
Confidence 34678999999988764
No 204
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=97.98 E-value=8.8e-06 Score=81.38 Aligned_cols=88 Identities=19% Similarity=0.252 Sum_probs=68.9
Q ss_pred cEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCCCcc---cCCHHHHhc
Q psy4626 78 KQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATGNKN---VVTREHMDK 153 (542)
Q Consensus 78 ktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~---lI~~e~l~~ 153 (542)
.+|+|+|+ |.+|..++..|...|.+|+++|+++.+.......|....+..++++.+|+||.|+.... ++ .+....
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~~~~v~-~~l~~~ 90 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNIIEKVA-EDIVPR 90 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHHHHHHH-HHHGGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchHHHHHH-HHHHHh
Confidence 48999999 99999999999999999999999987766554566655566778889999999986433 22 123345
Q ss_pred cCCCeEEEeccCC
Q psy4626 154 MKNGCVVCNMGHS 166 (542)
Q Consensus 154 mk~GailvnvG~g 166 (542)
++++.++++++.+
T Consensus 91 l~~~~ivv~~s~~ 103 (286)
T 3c24_A 91 VRPGTIVLILDAA 103 (286)
T ss_dssp SCTTCEEEESCSH
T ss_pred CCCCCEEEECCCC
Confidence 6889999987655
No 205
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=97.97 E-value=1.6e-05 Score=78.89 Aligned_cols=87 Identities=13% Similarity=0.182 Sum_probs=67.9
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce---eeCHHHHhcCCcEEEEcCCCc---ccCCHHHHh
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS---VVKLNEVIRTVDIVVTATGNK---NVVTREHMD 152 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~---v~~l~e~l~~aDvVi~atG~~---~lI~~e~l~ 152 (542)
+|+|+|+|.+|..++..+...|.+|+++|+++.+...+...|.. ..+++++ .++|+||.|+... .++ .+...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~-~~l~~ 79 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQLILPTL-EKLIP 79 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHHHHHHHH-HHHGG
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHHHHHHHH-HHHHh
Confidence 79999999999999999999999999999998877655555652 3466777 8999999998643 222 23345
Q ss_pred ccCCCeEEEeccCCC
Q psy4626 153 KMKNGCVVCNMGHSN 167 (542)
Q Consensus 153 ~mk~GailvnvG~g~ 167 (542)
.+++++++++++...
T Consensus 80 ~~~~~~~vv~~~~~~ 94 (279)
T 2f1k_A 80 HLSPTAIVTDVASVK 94 (279)
T ss_dssp GSCTTCEEEECCSCC
T ss_pred hCCCCCEEEECCCCc
Confidence 678899999986543
No 206
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=97.97 E-value=1.6e-05 Score=80.36 Aligned_cols=89 Identities=17% Similarity=0.260 Sum_probs=70.5
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee-CHHHHhcCCcEEEEcCCCcccCCHHHH-----
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV-KLNEVIRTVDIVVTATGNKNVVTREHM----- 151 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~-~l~e~l~~aDvVi~atG~~~lI~~e~l----- 151 (542)
.+|+|+|+|.+|..+|..|...|.+|+++|+++.+.......|..+. +.++++.++|+||.|+.++..+. +.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~-~v~~~~~~ 109 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAK-DLVLGPSG 109 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHH-HHHHSTTC
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHH-HHHcCchh
Confidence 67999999999999999999999999999999887665555676543 67788889999999987443332 222
Q ss_pred --hccCCCeEEEeccCCC
Q psy4626 152 --DKMKNGCVVCNMGHSN 167 (542)
Q Consensus 152 --~~mk~GailvnvG~g~ 167 (542)
+.++++..+++++...
T Consensus 110 ~~~~l~~~~~vv~~s~~~ 127 (316)
T 2uyy_A 110 VLQGIRPGKCYVDMSTVD 127 (316)
T ss_dssp GGGGCCTTCEEEECSCCC
T ss_pred HhhcCCCCCEEEECCCCC
Confidence 4578999999988654
No 207
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=97.96 E-value=8.1e-06 Score=83.00 Aligned_cols=88 Identities=16% Similarity=0.265 Sum_probs=65.8
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcC-------Ccee-eCHHHHhcCCcEEEEcCCCcccCC
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMD-------GFSV-VKLNEVIRTVDIVVTATGNKNVVT 147 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~-------G~~v-~~l~e~l~~aDvVi~atG~~~lI~ 147 (542)
.-++|+|+|.|.+|.++|+.+. .|.+|+++|+++.++..+... +..+ .++++ +++||+||+|.....-+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk 88 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTK 88 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHH
Confidence 4789999999999999999999 999999999999877655443 4443 34555 789999999875433222
Q ss_pred HH---HHhccCCCeEEE-eccCC
Q psy4626 148 RE---HMDKMKNGCVVC-NMGHS 166 (542)
Q Consensus 148 ~e---~l~~mk~Gailv-nvG~g 166 (542)
.. .++.+ ++++++ |++..
T Consensus 89 ~~l~~~l~~~-~~~IlasntSti 110 (293)
T 1zej_A 89 VEVLREVERL-TNAPLCSNTSVI 110 (293)
T ss_dssp HHHHHHHHTT-CCSCEEECCSSS
T ss_pred HHHHHHHhcC-CCCEEEEECCCc
Confidence 22 25666 898885 77654
No 208
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.96 E-value=2.4e-05 Score=82.05 Aligned_cols=220 Identities=16% Similarity=0.171 Sum_probs=118.9
Q ss_pred HHHHHHHhCCCEEEEEeCCc-----hhhhhhhcCCceeeC-HHHHhcCCcEEEEcCCCccc---CCHHHHhccCCCeEEE
Q psy4626 91 GCCQSLKGLGCVIYITEIDP-----ICALQACMDGFSVVK-LNEVIRTVDIVVTATGNKNV---VTREHMDKMKNGCVVC 161 (542)
Q Consensus 91 ~vA~~l~~~Ga~Viv~d~dp-----~r~~~A~~~G~~v~~-l~e~l~~aDvVi~atG~~~l---I~~e~l~~mk~Gailv 161 (542)
..++.|...|.+|++- .+. +...+....|+.+++ .++.+.++|+|+... . ++ ++.+.++.++++..++
T Consensus 21 ~~v~~L~~~G~~V~ve-~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~~adiil~v~-~-p~~~~~~~~~i~~l~~~~~~i 97 (384)
T 1l7d_A 21 EVVKKLVGLGFEVIVE-QGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQ-R-PMTAEEGTDEVALIKEGAVLM 97 (384)
T ss_dssp HHHHHHHHTTCEEEEE-TTTTGGGTCCHHHHHHTTCEEESSHHHHHSSCSEEEEEE-C-CCCGGGSCCGGGGSCTTCEEE
T ss_pred HHHHHHHhCCCEEEEE-cCCCccCCCCHHHHHHCCCEEecChhhhhcCCCEEEEec-C-cccccCCHHHHHhhccCCEEE
Confidence 3456777788888652 222 111222345777664 467888999988642 1 22 1457889999988887
Q ss_pred eccCC-CcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCCcccccCCCChhHHHhhHHHHHHHHHHHHhcCCC
Q psy4626 162 NMGHS-NTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLSCSSLPSFVVSITACTQALALIELFNAPS 240 (542)
Q Consensus 162 nvG~g-~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLvnl~~~thp~~vmd~sfa~q~la~~~L~~~~~ 240 (542)
...+. .+..+++++.++.+++.... .+ + ...+.+.++-|. |+....-..+ ++...+.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~gi~~~~~e-~~-----~-----~~~~~~~l~~l~----~~a~~ag~~a--v~~~~~~~---- 156 (384)
T 1l7d_A 98 CHLGALTNRPVVEALTKRKITAYAME-LM-----P-----RISRAQSMDILS----SQSNLAGYRA--VIDGAYEF---- 156 (384)
T ss_dssp EECCGGGCHHHHHHHHHTTCEEEEGG-GC-----C-----CSGGGGGGCHHH----HHHHHHHHHH--HHHHHHHC----
T ss_pred EEecccCCHHHHHHHHHCCCEEEEec-cc-----c-----ccccccccchhh----HHHHHHHHHH--HHHHHHHh----
Confidence 54443 34556777776655543211 00 0 000111122111 1111111111 22222221
Q ss_pred CCCCCc----cccCChhhHHHHHHhcCCcccc-ccccccHHHHhhcCCC----CCCCCCCCccccCCeeee---e-----
Q psy4626 241 GRYKSD----VYLLPKKMDEYVASLHLPTFDA-HLTELSDEQAKYMGLN----KAGPFKPSYYSMDGFSVV---K----- 303 (542)
Q Consensus 241 ~~~~~g----v~~lp~~~d~~VA~l~L~~lg~-~i~~lt~~~a~~lg~~----e~~p~~a~ea~mdG~~v~---~----- 303 (542)
+++.+. +..+|.. +.-.+|. .++....+.++.+|+. +..|.+.-++.--|.++. .
T Consensus 157 ~~~~~~~~~~~~~l~g~--------~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~ 228 (384)
T 1l7d_A 157 ARAFPMMMTAAGTVPPA--------RVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKT 228 (384)
T ss_dssp SSCSSCEEETTEEECCC--------EEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-------
T ss_pred hhcccchhccCCCCCCC--------EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeeccccccc
Confidence 122111 1111111 1222233 7777788888888873 334554333322343322 1
Q ss_pred ----------------------hhhhcccCcEEEEcc---CC--CCccCHhHHhcCCCCcEEEccC
Q psy4626 304 ----------------------LNEVIRTVDIVVTAT---GN--KNVVTREHMDKMKNGCVVCNMG 342 (542)
Q Consensus 304 ----------------------~~~a~~~~d~~~t~t---g~--~~vi~~~~~~~mk~gail~n~g 342 (542)
+++.++.+|+||+++ |. +.+|+.+.++.||+|++++|.|
T Consensus 229 ~~~~~~~~~~~s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 229 AETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp ----------------CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred ccccccchhhcCHHHHhhhHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 678889999999999 74 4588999999999999999999
No 209
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=97.95 E-value=1.5e-05 Score=79.51 Aligned_cols=88 Identities=19% Similarity=0.254 Sum_probs=68.5
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcccCCHHH-------
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKNVVTREH------- 150 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~~e~------- 150 (542)
+|+|+|+|.+|..++..+...|.+|+++|+++.+.......|..+ .+++++++.+|+||.|+..+..+. +.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~-~v~~~~~~~ 80 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAI-EAYSGANGI 80 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHH-HHHHSTTSG
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHH-HHHhCchhH
Confidence 689999999999999999999999999999998776655667764 467788889999999975432221 22
Q ss_pred HhccCCCeEEEeccCCC
Q psy4626 151 MDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 151 l~~mk~GailvnvG~g~ 167 (542)
++.++++.++++++...
T Consensus 81 ~~~l~~~~~vv~~s~~~ 97 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTID 97 (296)
T ss_dssp GGTCCTTCEEEECSCCC
T ss_pred HhcCCCCCEEEECCCCC
Confidence 23568899999966543
No 210
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.95 E-value=1.1e-05 Score=75.05 Aligned_cols=91 Identities=21% Similarity=0.293 Sum_probs=65.6
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhC-CCEEEEEeCCchhhhhhhcCCceee--C------HHHH--hcCCcEEEEcCCC
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGL-GCVIYITEIDPICALQACMDGFSVV--K------LNEV--IRTVDIVVTATGN 142 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~-Ga~Viv~d~dp~r~~~A~~~G~~v~--~------l~e~--l~~aDvVi~atG~ 142 (542)
.+.+++++|+|+|.+|+.+++.|+.. |.+|+++|+++.+...+...|+.++ + +.++ +.++|+||.++++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 45688999999999999999999999 9999999999988776666676543 2 2333 5689999999876
Q ss_pred cccCC--HHHHhccCCCeEEEecc
Q psy4626 143 KNVVT--REHMDKMKNGCVVCNMG 164 (542)
Q Consensus 143 ~~lI~--~e~l~~mk~GailvnvG 164 (542)
..... ...+..+.+...++...
T Consensus 116 ~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 116 HQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 43211 12344455455555444
No 211
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=97.94 E-value=1.8e-05 Score=81.64 Aligned_cols=184 Identities=15% Similarity=0.177 Sum_probs=112.2
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.++++|+++..... -++++.++.+++-..+...|.|-+.+|++++..+++.+.....
T Consensus 38 ~~~~~~d~~i~~~~~--~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~~-------------------- 95 (333)
T 2d0i_A 38 GVIGRFDGIIVSPTT--KITREVLENAERLKVISCHSAGYDNIDLEEATKRGIYVTKVSG-------------------- 95 (333)
T ss_dssp HHGGGCSEEEECTTS--CBCHHHHTTCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCH--------------------
T ss_pred HHhcCCEEEEECCCC--CCCHHHHhhCCCceEEEECCcccccccHHHHHhCCcEEEeCCC--------------------
Confidence 446889999865433 4678889999999999999999888999888755544332210
Q ss_pred cccccCCCChhHHHh------hHHHHHHHHHHHHhcCCCCCCCCcc-ccCChhhHHHHHHhcCCcccc----ccccccHH
Q psy4626 208 LVNLSCSSLPSFVVS------ITACTQALALIELFNAPSGRYKSDV-YLLPKKMDEYVASLHLPTFDA----HLTELSDE 276 (542)
Q Consensus 208 Lvnl~~~thp~~vmd------~sfa~q~la~~~L~~~~~~~~~~gv-~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~ 276 (542)
.| +..+-+ ++++.++.......++ +.|...- ...+.. .+-++..+++|+ .+++..++
T Consensus 96 -~~------~~~vAE~~~~~~L~~~R~~~~~~~~~~~--g~w~~~~~~~~~~~---~~~~l~g~~vgIIG~G~iG~~vA~ 163 (333)
T 2d0i_A 96 -LL------SEAVAEFTVGLIINLMRKIHYADKFIRR--GEWESHAKIWTGFK---RIESLYGKKVGILGMGAIGKAIAR 163 (333)
T ss_dssp -HH------HHHHHHHHHHHHHHHHHCHHHHHHHHHT--TCCCCHHHHHTTSC---CCCCSTTCEEEEECCSHHHHHHHH
T ss_pred -cC------hHHHHHHHHHHHHHHHhHHHHHHHHHHc--CCCCcCcccccCCc---ccCCCCcCEEEEEccCHHHHHHHH
Confidence 00 111111 1122222111222222 4674310 000000 001234455555 78888888
Q ss_pred HHhhcCCC--CCCCCCCC-ccccCCeeeeehhhhcccCcEEEEcc----CCCCccCHhHHhcCCCCcEEEccCCCCc
Q psy4626 277 QAKYMGLN--KAGPFKPS-YYSMDGFSVVKLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCNMGHSNT 346 (542)
Q Consensus 277 ~a~~lg~~--e~~p~~a~-ea~mdG~~v~~~~~a~~~~d~~~t~t----g~~~vi~~~~~~~mk~gail~n~gh~~~ 346 (542)
+++.+|+. -.||.... .+.-.|.+..+++++++++|+|+.++ .++++|+.+.++.||+| +++|++++..
T Consensus 164 ~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~ 239 (333)
T 2d0i_A 164 RLIPFGVKLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGAL 239 (333)
T ss_dssp HHGGGTCEEEEECSSCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGG
T ss_pred HHHHCCCEEEEECCCcchhhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcc
Confidence 89888873 22333221 22234666668899999999999944 56789999999999999 9999998764
No 212
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=97.93 E-value=2.2e-05 Score=81.59 Aligned_cols=186 Identities=13% Similarity=0.126 Sum_probs=112.6
Q ss_pred CCcEEEEcC---C-CcccCCHHHHhccCC-CeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCC
Q psy4626 132 TVDIVVTAT---G-NKNVVTREHMDKMKN-GCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEG 206 (542)
Q Consensus 132 ~aDvVi~at---G-~~~lI~~e~l~~mk~-GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~G 206 (542)
++|+++..- + ...-++++.|+.+++ -..+...|.|-+.+|++++.++++.+....
T Consensus 51 ~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p-------------------- 110 (348)
T 2w2k_A 51 DFEAIIKLAVENGTESYPWNADLISHLPSSLKVFAAAGAGFDWLDLDALNERGVAFANSR-------------------- 110 (348)
T ss_dssp CCSEEEECSTTTTGGGCCBCHHHHTTSCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCT--------------------
T ss_pred CeEEEEEcccccccccCCCCHHHHHhcccCceEEEECCccccccCHHHHHhCCcEEEECC--------------------
Confidence 789887631 1 233578889999974 788889999988899998875554443221
Q ss_pred CcccccCCCChhHHHhhHH------HHHHHHHHHHhcCCCCC---CCCcc---ccCChhhHHHHHHhcCCcccc----cc
Q psy4626 207 RLVNLSCSSLPSFVVSITA------CTQALALIELFNAPSGR---YKSDV---YLLPKKMDEYVASLHLPTFDA----HL 270 (542)
Q Consensus 207 rLvnl~~~thp~~vmd~sf------a~q~la~~~L~~~~~~~---~~~gv---~~lp~~~d~~VA~l~L~~lg~----~i 270 (542)
.. +...+-+..+ +.++.......+. ++ |...- ...+. ++..+++|+ .|
T Consensus 111 ------~~-~~~~vAe~~~~l~L~~~R~~~~~~~~~~~--g~~~~w~~~~~~~~~~~~-------~l~g~~vgIIG~G~I 174 (348)
T 2w2k_A 111 ------GA-GDTATSDLALYLILSVFRLASYSERAART--GDPETFNRVHLEIGKSAH-------NPRGHVLGAVGLGAI 174 (348)
T ss_dssp ------TT-THHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCHHHHHHHHHHHHTTCC-------CSTTCEEEEECCSHH
T ss_pred ------CC-CcHHHHHHHHHHHHHHHhChHHHHHHHHc--CCCcccccccccccccCc-------CCCCCEEEEEEECHH
Confidence 00 1111112222 2222111122222 34 42100 00000 234456665 88
Q ss_pred ccccHHHHh-hcCCC--CCCCC--CCCccccCCeeee-ehhhhcccCcEEEEcc----CCCCccCHhHHhcCCCCcEEEc
Q psy4626 271 TELSDEQAK-YMGLN--KAGPF--KPSYYSMDGFSVV-KLNEVIRTVDIVVTAT----GNKNVVTREHMDKMKNGCVVCN 340 (542)
Q Consensus 271 ~~lt~~~a~-~lg~~--e~~p~--~a~ea~mdG~~v~-~~~~a~~~~d~~~t~t----g~~~vi~~~~~~~mk~gail~n 340 (542)
++..+++++ .+|+. -.||. +.-.+.-.|.+.. +++++++.+|+|+.++ .++++|+.+.|+.||+|++|+|
T Consensus 175 G~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin 254 (348)
T 2w2k_A 175 QKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVN 254 (348)
T ss_dssp HHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEE
T ss_pred HHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEE
Confidence 888889998 88873 22443 2222222366665 7899999999999954 3679999999999999999999
Q ss_pred cCCCCccccccccc
Q psy4626 341 MGHSNTEIDVNSLR 354 (542)
Q Consensus 341 ~gh~~~Ei~~~~l~ 354 (542)
++++.. +|.++|.
T Consensus 255 ~srg~~-vd~~aL~ 267 (348)
T 2w2k_A 255 TARGPV-ISQDALI 267 (348)
T ss_dssp CSCGGG-BCHHHHH
T ss_pred CCCCch-hCHHHHH
Confidence 999966 3334443
No 213
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=97.92 E-value=2.3e-05 Score=76.94 Aligned_cols=87 Identities=11% Similarity=0.158 Sum_probs=68.9
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-CCcee-eCHHHHhcCCcEEEEcCCCcccCCHHHHhccC
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-DGFSV-VKLNEVIRTVDIVVTATGNKNVVTREHMDKMK 155 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-~G~~v-~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk 155 (542)
.+|+|+|+|.+|..++..+...|.+|.++|+++.+...... .|..+ .+.+++++++|+||.|+. +..+ .+.+..++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~-~~v~~~l~ 81 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLF-ETVLKPLH 81 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGH-HHHHTTSC
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhH-HHHHHHhc
Confidence 47999999999999999999999999999999887654432 36554 467788889999999986 3333 46777788
Q ss_pred CCeEEEeccCC
Q psy4626 156 NGCVVCNMGHS 166 (542)
Q Consensus 156 ~GailvnvG~g 166 (542)
+|.++++...+
T Consensus 82 ~~~~vv~~~~~ 92 (259)
T 2ahr_A 82 FKQPIISMAAG 92 (259)
T ss_dssp CCSCEEECCTT
T ss_pred cCCEEEEeCCC
Confidence 88888887544
No 214
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=97.92 E-value=9.5e-06 Score=79.99 Aligned_cols=92 Identities=12% Similarity=0.143 Sum_probs=69.8
Q ss_pred ccCcEEEEEcCChhHHHHHHHHHhCCCE-EEEEeCCchhhhhhhc-CCcee-eCHHHHhcCCcEEEEcCCCccc---CCH
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLKGLGCV-IYITEIDPICALQACM-DGFSV-VKLNEVIRTVDIVVTATGNKNV---VTR 148 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~~~Ga~-Viv~d~dp~r~~~A~~-~G~~v-~~l~e~l~~aDvVi~atG~~~l---I~~ 148 (542)
+.+.+|+|+|+|.+|..++..+...|.+ |.++|+++.+...... .|..+ .+++++++++|+||.|+....+ + .
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v~-~ 86 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSAFAELL-Q 86 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHHHHHHH-H
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHHHHHHH-H
Confidence 3456899999999999999999988997 9999999887654433 36654 4677788899999999865422 2 1
Q ss_pred HHHhccCCCeEEEeccCCC
Q psy4626 149 EHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 149 e~l~~mk~GailvnvG~g~ 167 (542)
+....++++.++++++.+.
T Consensus 87 ~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 87 GIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp HHHTTCCTTCEEEECCTTS
T ss_pred HHHhhcCCCcEEEECCCCC
Confidence 2334567899999888763
No 215
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=97.92 E-value=1.9e-05 Score=78.65 Aligned_cols=88 Identities=16% Similarity=0.146 Sum_probs=68.7
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcccCCHHHH-----
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKNVVTREHM----- 151 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~~e~l----- 151 (542)
.+|+|+|+|.+|..++..|...|.+|+++| ++.+.......|... .++++++..+|+||.|+.....+. +.+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~-~v~~~~~~ 81 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVE-DVLFGEHG 81 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHH-HHHHSTTS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHH-HHHhCchh
Confidence 479999999999999999999999999999 887765554556553 467788889999999986543222 233
Q ss_pred --hccCCCeEEEeccCCC
Q psy4626 152 --DKMKNGCVVCNMGHSN 167 (542)
Q Consensus 152 --~~mk~GailvnvG~g~ 167 (542)
+.+++|.++++++.+.
T Consensus 82 l~~~l~~~~~vv~~s~~~ 99 (295)
T 1yb4_A 82 CAKTSLQGKTIVDMSSIS 99 (295)
T ss_dssp STTSCCTTEEEEECSCCC
T ss_pred HhhcCCCCCEEEECCCCC
Confidence 3578899999988764
No 216
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=97.90 E-value=1.6e-05 Score=79.36 Aligned_cols=89 Identities=16% Similarity=0.207 Sum_probs=68.2
Q ss_pred cEEEEEcCChhHHHHHHHHHhC--CCEEEEEeCCchhhhhhhcCCce---eeCHHHHhcCCcEEEEcCCCcc---cCCHH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGL--GCVIYITEIDPICALQACMDGFS---VVKLNEVIRTVDIVVTATGNKN---VVTRE 149 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~--Ga~Viv~d~dp~r~~~A~~~G~~---v~~l~e~l~~aDvVi~atG~~~---lI~~e 149 (542)
++|+|||+|.+|..+|..+... |.+|+++|+++.+...+...|.. ..+++++++.+|+||.|+.... ++ .+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~-~~ 85 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKTIDFI-KI 85 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHHHHHH-HH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHHHHHH-HH
Confidence 5899999999999999999876 67999999998877655556652 3466778889999999986432 22 23
Q ss_pred HHhc-cCCCeEEEeccCCC
Q psy4626 150 HMDK-MKNGCVVCNMGHSN 167 (542)
Q Consensus 150 ~l~~-mk~GailvnvG~g~ 167 (542)
.... ++++.++++++...
T Consensus 86 l~~~~l~~~~ivi~~~~~~ 104 (290)
T 3b1f_A 86 LADLDLKEDVIITDAGSTK 104 (290)
T ss_dssp HHTSCCCTTCEEECCCSCH
T ss_pred HHhcCCCCCCEEEECCCCc
Confidence 3445 78899999887653
No 217
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.90 E-value=3e-05 Score=65.73 Aligned_cols=87 Identities=15% Similarity=0.120 Sum_probs=61.6
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCC-CEEEEEeCCchhhhhhhcCCceee--C------HHHHhcCCcEEEEcCCCcccC
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLG-CVIYITEIDPICALQACMDGFSVV--K------LNEVIRTVDIVVTATGNKNVV 146 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~G-a~Viv~d~dp~r~~~A~~~G~~v~--~------l~e~l~~aDvVi~atG~~~lI 146 (542)
.+++|+|+|+|.+|+.+++.|...| .+|+++++++.+.......+.... + +.+++.++|+||.+++...
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~-- 81 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL-- 81 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG--
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh--
Confidence 4689999999999999999999999 799999999987765544554422 1 3355689999999986432
Q ss_pred CHHHHhc-cCCCeEEEecc
Q psy4626 147 TREHMDK-MKNGCVVCNMG 164 (542)
Q Consensus 147 ~~e~l~~-mk~GailvnvG 164 (542)
....+.. .+.|...+..+
T Consensus 82 ~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 82 TPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp HHHHHHHHHHTTCEEECCC
T ss_pred hHHHHHHHHHhCCCEEEec
Confidence 1222222 34555555544
No 218
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=97.89 E-value=1.9e-05 Score=81.34 Aligned_cols=103 Identities=18% Similarity=0.243 Sum_probs=77.4
Q ss_pred HHHHHHHHhhcCccccC--cEEEEEcC-ChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhc-CCce-eeCH-----HHH
Q psy4626 61 ESIIDSLKRSTDVMFGG--KQVVLCGY-GEVGKGCCQSLKGLGC-VIYITEIDPICALQACM-DGFS-VVKL-----NEV 129 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~G--ktVvViG~-G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~-~G~~-v~~l-----~e~ 129 (542)
...|+++.+..+ ...| ++|+|+|. |.||+.+++.++..|+ +|+++++++.+...+.. .|.+ +++. .+.
T Consensus 144 ~ta~~al~~~~~-~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~ 222 (357)
T 2zb4_A 144 LTSLIGIQEKGH-ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQ 222 (357)
T ss_dssp HHHHHHHHHHSC-CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHH
T ss_pred HHHHHHHHHhcC-CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHH
Confidence 345666643322 3578 99999998 9999999999999999 99999998877766654 6754 2321 122
Q ss_pred h-----cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 130 I-----RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 130 l-----~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
+ .+.|++|+++|. ..+ .+.++.+++++.++.+|..
T Consensus 223 ~~~~~~~~~d~vi~~~G~-~~~-~~~~~~l~~~G~iv~~G~~ 262 (357)
T 2zb4_A 223 LRESCPAGVDVYFDNVGG-NIS-DTVISQMNENSHIILCGQI 262 (357)
T ss_dssp HHHHCTTCEEEEEESCCH-HHH-HHHHHTEEEEEEEEECCCG
T ss_pred HHHhcCCCCCEEEECCCH-HHH-HHHHHHhccCcEEEEECCc
Confidence 2 258999999986 344 4789999999999999864
No 219
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=97.88 E-value=2.5e-05 Score=80.25 Aligned_cols=88 Identities=17% Similarity=0.249 Sum_probs=66.2
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-----------CC--------------ce-eeCHHHHhc
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-----------DG--------------FS-VVKLNEVIR 131 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-----------~G--------------~~-v~~l~e~l~ 131 (542)
++|+|||.|.+|.++|..+...|.+|+++|+++.+...+.. .| .. ..+++++++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav~ 86 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAVE 86 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHTT
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHHh
Confidence 68999999999999999999999999999999976554321 22 12 346778899
Q ss_pred CCcEEEEcCCCc-----ccCCHHHHhccCCCeEEEeccCC
Q psy4626 132 TVDIVVTATGNK-----NVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 132 ~aDvVi~atG~~-----~lI~~e~l~~mk~GailvnvG~g 166 (542)
+||+||+|.... .++ .+..+.+++++++++.+++
T Consensus 87 ~aDlVieavpe~~~~k~~v~-~~l~~~~~~~~Ii~s~tS~ 125 (319)
T 2dpo_A 87 GVVHIQECVPENLDLKRKIF-AQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp TEEEEEECCCSCHHHHHHHH-HHHHTTCCSSSEEEECCSS
T ss_pred cCCEEEEeccCCHHHHHHHH-HHHHhhCCCCeEEEEeCCC
Confidence 999999997542 122 2344567999999755443
No 220
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=97.11 E-value=1.7e-06 Score=82.91 Aligned_cols=90 Identities=17% Similarity=0.204 Sum_probs=67.4
Q ss_pred ccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCCCcccCCHHH--Hh
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATGNKNVVTREH--MD 152 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~--l~ 152 (542)
..+++++|+|+|.+|..++..|...|.+|+++++++. .......|....+..++++.+|+||.++.... +. +. +.
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~~~~~~~~~aDvVilav~~~~-~~-~v~~l~ 93 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVLCYSEAASRSDVIVLAVHREH-YD-FLAELA 93 (201)
Confidence 4677999999999999999999999999999998876 32223345555567778889999999875432 21 22 33
Q ss_pred ccCCCeEEEeccCCC
Q psy4626 153 KMKNGCVVCNMGHSN 167 (542)
Q Consensus 153 ~mk~GailvnvG~g~ 167 (542)
.++++.++++++.+.
T Consensus 94 ~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 94 DSLKGRVLIDVSNNQ 108 (201)
Confidence 456788999988774
No 221
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=97.86 E-value=9e-06 Score=84.81 Aligned_cols=99 Identities=14% Similarity=0.085 Sum_probs=73.7
Q ss_pred HHHHHHhhcCccccCcEEEEE--cCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-eeC-----HHHHh----
Q psy4626 63 IIDSLKRSTDVMFGGKQVVLC--GYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VVK-----LNEVI---- 130 (542)
Q Consensus 63 ~~~ai~r~~~~~l~GktVvVi--G~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~~-----l~e~l---- 130 (542)
.|+++.+.. .+|++|+|+ |.|.+|+.+++.++.+|++|++++.++.+...+...|++ +++ ..+.+
T Consensus 160 a~~~~~~~~---~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~v~~~t 236 (379)
T 3iup_A 160 ALGMVETMR---LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEAL 236 (379)
T ss_dssp HHHHHHHHH---HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHHHHHHH
T ss_pred HHHHHHHhc---cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHHHHHHh
Confidence 345554442 579999999 899999999999999999999999999998888888876 332 22222
Q ss_pred --cCCcEEEEcCCCcccCCHHHHhcc-----CCCeEEEeccC
Q psy4626 131 --RTVDIVVTATGNKNVVTREHMDKM-----KNGCVVCNMGH 165 (542)
Q Consensus 131 --~~aDvVi~atG~~~lI~~e~l~~m-----k~GailvnvG~ 165 (542)
.++|++++|+|....+. ..++.+ ++++.++.+|.
T Consensus 237 ~~~g~d~v~d~~g~~~~~~-~~~~~l~~~~~r~~G~~~~~G~ 277 (379)
T 3iup_A 237 VSTGATIAFDATGGGKLGG-QILTCMEAALNKSAREYSRYGS 277 (379)
T ss_dssp HHHCCCEEEESCEEESHHH-HHHHHHHHHHHTTCCSCCTTCC
T ss_pred cCCCceEEEECCCchhhHH-HHHHhcchhhhccccceeeccc
Confidence 37999999999766653 556665 56666655553
No 222
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=97.86 E-value=1e-05 Score=83.97 Aligned_cols=90 Identities=14% Similarity=0.212 Sum_probs=70.1
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-eCHHHHhc----CCcEEEEcCCCcccCCH--H
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-VKLNEVIR----TVDIVVTATGNKNVVTR--E 149 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~----~aDvVi~atG~~~lI~~--e 149 (542)
-++|+|||+|.||..+|+.|+..|.+|+++|+++.+...+...|+.. .+++++++ ++|+||.|+... .+.. +
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~-~~~~vl~ 86 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMT-AIDSLLD 86 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHH-HHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHH-HHHHHHH
Confidence 45799999999999999999999999999999998877777788754 45666654 579999997632 2210 2
Q ss_pred HHhccCCCeEEEeccCCC
Q psy4626 150 HMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 150 ~l~~mk~GailvnvG~g~ 167 (542)
.+..++++++++++|...
T Consensus 87 ~l~~~~~~~iv~Dv~Svk 104 (341)
T 3ktd_A 87 AVHTHAPNNGFTDVVSVK 104 (341)
T ss_dssp HHHHHCTTCCEEECCSCS
T ss_pred HHHccCCCCEEEEcCCCC
Confidence 344458999999998754
No 223
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.84 E-value=3e-05 Score=69.29 Aligned_cols=88 Identities=13% Similarity=0.089 Sum_probs=63.5
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeC-----H---HHH-hcCCcEEEEcCCCcccC-
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVK-----L---NEV-IRTVDIVVTATGNKNVV- 146 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~-----l---~e~-l~~aDvVi~atG~~~lI- 146 (542)
.++++|+|+|.+|+.+|+.|+..|.+|+++|.||.+...+...|+.++. . .++ +.++|++|.++++...-
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 4579999999999999999999999999999999988777777876432 1 121 46899999998754211
Q ss_pred -CHHHHhccCCCeEEEecc
Q psy4626 147 -TREHMDKMKNGCVVCNMG 164 (542)
Q Consensus 147 -~~e~l~~mk~GailvnvG 164 (542)
-...+..+.+...++-..
T Consensus 87 ~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 87 EIVASARAKNPDIEIIARA 105 (140)
T ss_dssp HHHHHHHHHCSSSEEEEEE
T ss_pred HHHHHHHHHCCCCeEEEEE
Confidence 012344555555555433
No 224
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=97.81 E-value=3.1e-05 Score=81.65 Aligned_cols=80 Identities=19% Similarity=0.250 Sum_probs=65.8
Q ss_pred cCcEEEEEcC-ChhHHHHHHHHHhCCC---EEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCC----CcccCC
Q psy4626 76 GGKQVVLCGY-GEVGKGCCQSLKGLGC---VIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATG----NKNVVT 147 (542)
Q Consensus 76 ~GktVvViG~-G~IG~~vA~~l~~~Ga---~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG----~~~lI~ 147 (542)
...+|+|+|+ |.+|++.++.|+++|+ .|.++|+++... |... +.+..+|+||.|.- .+.+|+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~------g~~~----~~i~~aDivIn~vlig~~aP~Lvt 282 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSR------GGPF----DEIPQADIFINCIYLSKPIAPFTN 282 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTT------CSCC----THHHHSSEEEECCCCCSSCCCSCC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccccc------CCch----hhHhhCCEEEECcCcCCCCCcccC
Confidence 4678999999 9999999999999998 899999766211 2221 34568999999762 578899
Q ss_pred HHHHhcc-CCCeEEEeccC
Q psy4626 148 REHMDKM-KNGCVVCNMGH 165 (542)
Q Consensus 148 ~e~l~~m-k~GailvnvG~ 165 (542)
++.++.| |+|++|+.++-
T Consensus 283 ~e~v~~m~k~gsVIVDVA~ 301 (394)
T 2qrj_A 283 MEKLNNPNRRLRTVVDVSA 301 (394)
T ss_dssp HHHHCCTTCCCCEEEETTC
T ss_pred HHHHhcCcCCCeEEEEEec
Confidence 9999999 99999999873
No 225
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.80 E-value=3.3e-05 Score=68.56 Aligned_cols=67 Identities=16% Similarity=0.235 Sum_probs=53.4
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee--C---HH---HH-hcCCcEEEEcCCC
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV--K---LN---EV-IRTVDIVVTATGN 142 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~--~---l~---e~-l~~aDvVi~atG~ 142 (542)
.+++++|+|+|.+|+.+++.|...|.+|+++|.++.+...+...|+.+. + .+ ++ +.++|+||.++++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~ 80 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSD 80 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCC
Confidence 3578999999999999999999999999999999988776666676543 1 11 11 3689999999874
No 226
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.79 E-value=4.5e-05 Score=66.91 Aligned_cols=69 Identities=22% Similarity=0.319 Sum_probs=52.7
Q ss_pred ccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee-----CHH---HH-hcCCcEEEEcCCCc
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV-----KLN---EV-IRTVDIVVTATGNK 143 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~-----~l~---e~-l~~aDvVi~atG~~ 143 (542)
+.+++++|+|+|.+|+.+++.|+..|.+|+++|+++.+...+...|..+. +.+ ++ +.++|+||.+++..
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 45778999999999999999999999999999999877655544555432 222 22 56899999998863
No 227
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=97.78 E-value=5.7e-05 Score=76.99 Aligned_cols=89 Identities=13% Similarity=0.114 Sum_probs=68.9
Q ss_pred ccCcEEEEEcCChhHHHHHHHHHhC-CC-EEEEEeCCchhhhhh-hcCC--ce-eeCHHHHhcCCcEEEEcCCC-cccCC
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLKGL-GC-VIYITEIDPICALQA-CMDG--FS-VVKLNEVIRTVDIVVTATGN-KNVVT 147 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~~~-Ga-~Viv~d~dp~r~~~A-~~~G--~~-v~~l~e~l~~aDvVi~atG~-~~lI~ 147 (542)
..+++++|||+|.+|+.+++.+... |. +|.++|+++.+.... ...+ +. ..+++++++++|+|++|+.. ..++.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~~~v~~ 212 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLATEPILF 212 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCSSCCBC
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCCCcccC
Confidence 3578999999999999999988654 87 999999999876543 2334 44 34678889999999998753 33443
Q ss_pred HHHHhccCCCeEEEeccCC
Q psy4626 148 REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 148 ~e~l~~mk~GailvnvG~g 166 (542)
. +.+++|..++++|..
T Consensus 213 ~---~~l~~g~~vi~~g~~ 228 (312)
T 2i99_A 213 G---EWVKPGAHINAVGAS 228 (312)
T ss_dssp G---GGSCTTCEEEECCCC
T ss_pred H---HHcCCCcEEEeCCCC
Confidence 2 578999999998866
No 228
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=97.78 E-value=0.00015 Score=74.63 Aligned_cols=187 Identities=16% Similarity=0.225 Sum_probs=112.2
Q ss_pred HHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCC
Q psy4626 128 EVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGR 207 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~Gr 207 (542)
+.++++|+++....+ -++++.++.+++-..+...|.|-+.+|++++..+++.+....
T Consensus 41 ~~~~~~d~~~~~~~~--~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~--------------------- 97 (334)
T 2dbq_A 41 KKVKEVDALVTMLSE--RIDKEVFENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTP--------------------- 97 (334)
T ss_dssp HHTTSCSEEEECTTS--CBCHHHHHTCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCC---------------------
T ss_pred HHhcCcEEEEEcCCC--CCCHHHHhhCCCceEEEECCcccccccHHHHHhCCCEEEeCC---------------------
Confidence 446889999875322 367788999999889999999988899988875544433221
Q ss_pred cccccCCCChhHHHh------hHHHHHHHHHHHHhcCCCCCCC-------CccccCChhhHHHHHHhcCCcccc----cc
Q psy4626 208 LVNLSCSSLPSFVVS------ITACTQALALIELFNAPSGRYK-------SDVYLLPKKMDEYVASLHLPTFDA----HL 270 (542)
Q Consensus 208 Lvnl~~~thp~~vmd------~sfa~q~la~~~L~~~~~~~~~-------~gv~~lp~~~d~~VA~l~L~~lg~----~i 270 (542)
.. +...+-+ ++++.++.......+. +.|. +. ..... ++...++|+ .+
T Consensus 98 -----~~-~~~~vAE~~~~~~L~~~R~~~~~~~~~~~--~~w~~~~~~~~~~-~~~~~-------~l~g~~vgIIG~G~i 161 (334)
T 2dbq_A 98 -----DV-LTDATADLAFALLLATARHVVKGDRFVRS--GEWKKRGVAWHPK-WFLGY-------DVYGKTIGIIGLGRI 161 (334)
T ss_dssp -----ST-THHHHHHHHHHHHHHHHHTHHHHHHHHHT--SHHHHTTCCCCTT-TTCCC-------CCTTCEEEEECCSHH
T ss_pred -----Cc-CHHHHHHHHHHHHHHHHhCHHHHHHHHHc--CCCcccccccccc-ccccc-------CCCCCEEEEEccCHH
Confidence 00 1111111 1122222111111221 2342 10 00000 123334444 77
Q ss_pred ccccHHHHhhcCCC--CCCCCCCCc-cccCCeeeeehhhhcccCcEEEEccC----CCCccCHhHHhcCCCCcEEEccCC
Q psy4626 271 TELSDEQAKYMGLN--KAGPFKPSY-YSMDGFSVVKLNEVIRTVDIVVTATG----NKNVVTREHMDKMKNGCVVCNMGH 343 (542)
Q Consensus 271 ~~lt~~~a~~lg~~--e~~p~~a~e-a~mdG~~v~~~~~a~~~~d~~~t~tg----~~~vi~~~~~~~mk~gail~n~gh 343 (542)
++..+.+++.+|+. -.||...-+ +.-.|.+..+++++++.+|+|+.++. ++++|+.+.++.||+|++++|+++
T Consensus 162 G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~sr 241 (334)
T 2dbq_A 162 GQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIAR 241 (334)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred HHHHHHHHHhCCCEEEEECCCcchhhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence 78888888888873 223322212 22236666688999999999999443 568999999999999999999998
Q ss_pred CCccccccccc
Q psy4626 344 SNTEIDVNSLR 354 (542)
Q Consensus 344 ~~~Ei~~~~l~ 354 (542)
+.. +|-.+|.
T Consensus 242 g~~-v~~~aL~ 251 (334)
T 2dbq_A 242 GKV-VDTNALV 251 (334)
T ss_dssp GGG-BCHHHHH
T ss_pred Ccc-cCHHHHH
Confidence 765 4433343
No 229
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.77 E-value=6.3e-05 Score=75.16 Aligned_cols=102 Identities=19% Similarity=0.202 Sum_probs=67.7
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh-cC----CceeeCHHHHhc-CCc
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQAC-MD----GFSVVKLNEVIR-TVD 134 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~-~~----G~~v~~l~e~l~-~aD 134 (542)
.+++.++.+. +..+.|++++|+|.|.+|+.++..|...|.+|+++++++.++.... .. .....+++++.. ++|
T Consensus 104 ~G~~~~L~~~-~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~D 182 (272)
T 1p77_A 104 IGLVTDLQRL-NWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYD 182 (272)
T ss_dssp HHHHHHHHHT-TCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCS
T ss_pred HHHHHHHHHh-CCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCC
Confidence 4455555543 3467899999999999999999999999999999999987654321 11 123344444334 899
Q ss_pred EEEEcCCCccc-----CCHHHHhccCCCeEEEeccCC
Q psy4626 135 IVVTATGNKNV-----VTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 135 vVi~atG~~~l-----I~~e~l~~mk~GailvnvG~g 166 (542)
+||.+++.... +.. +.++++.+++++...
T Consensus 183 ivIn~t~~~~~~~~~~i~~---~~l~~~~~v~D~~y~ 216 (272)
T 1p77_A 183 LVINATSAGLSGGTASVDA---EILKLGSAFYDMQYA 216 (272)
T ss_dssp EEEECCCC-------CCCH---HHHHHCSCEEESCCC
T ss_pred EEEECCCCCCCCCCCCCCH---HHcCCCCEEEEeeCC
Confidence 99999875321 221 223556666666654
No 230
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.76 E-value=0.00018 Score=76.06 Aligned_cols=221 Identities=17% Similarity=0.183 Sum_probs=114.7
Q ss_pred HHHHHHHhCCCEEEEEeCCchh-----hhhhhcCCceeeCHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEec-c
Q psy4626 91 GCCQSLKGLGCVIYITEIDPIC-----ALQACMDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNM-G 164 (542)
Q Consensus 91 ~vA~~l~~~Ga~Viv~d~dp~r-----~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~Gailvnv-G 164 (542)
..++.|...|.+|.|- .++.. -.+....|+.+++-+++++ +|+|+.. ..+ ..+.++.++++..++.. +
T Consensus 28 ~~v~~L~~~G~~V~ve-~~ag~~~gf~d~~y~~aGa~i~~~~~~~~-adiil~v-k~p---~~~~i~~l~~~~~li~~~~ 101 (401)
T 1x13_A 28 KTVEQLLKLGFTVAVE-SGAGQLASFDDKAFVQAGAEIVEGNSVWQ-SEIILKV-NAP---LDDEIALLNPGTTLVSFIW 101 (401)
T ss_dssp HHHHHHHHTTCEEEEE-TTTTGGGTCCHHHHHHHTCEEECGGGGGS-SSEEECS-SCC---CHHHHTTCCTTCEEEECCC
T ss_pred HHHHHHHHCCCEEEEE-ECCCcccCCChHHHHHCCCEEeccHHHhc-CCeEEEe-CCC---CHHHHHHhcCCCcEEEEec
Confidence 3456677788887653 22211 1112234666655444555 9998743 222 35788999888877743 3
Q ss_pred CCCcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCCcccccCCCChhHHHhhHHHHHHHHHHHHhcCCCCCCC
Q psy4626 165 HSNTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLSCSSLPSFVVSITACTQALALIELFNAPSGRYK 244 (542)
Q Consensus 165 ~g~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLvnl~~~thp~~vmd~sfa~q~la~~~L~~~~~~~~~ 244 (542)
.+.+.++++++.++++.+.... .+.+ +-..++++-+. ++-... ....++...+.+ +++.
T Consensus 102 ~~~d~~~~~al~~~gI~v~~~e-~v~~----------~~~a~~l~~l~----~~a~~a--g~~av~~~~~~~----~~~~ 160 (401)
T 1x13_A 102 PAQNPELMQKLAERNVTVMAMD-SVPR----------ISRAQSLDALS----SMANIA--GYRAIVEAAHEF----GRFF 160 (401)
T ss_dssp GGGCHHHHHHHHHTTCEEEEGG-GCCC----------SGGGGGGCHHH----HHHHHH--HHHHHHHHHHHC----SSCS
T ss_pred CCCCHHHHHHHHHCCCEEEEee-hhhh----------hhhhcccchHH----HHHHHH--HHHHHHHHHHhc----cccc
Confidence 3446777888876665543211 0000 00001111111 111111 111122222222 2222
Q ss_pred CccccCChhhHHHHHHhcCCcccc-ccccccHHHHhhcCCC----CCCCCCCCccccCCeeee-----------------
Q psy4626 245 SDVYLLPKKMDEYVASLHLPTFDA-HLTELSDEQAKYMGLN----KAGPFKPSYYSMDGFSVV----------------- 302 (542)
Q Consensus 245 ~gv~~lp~~~d~~VA~l~L~~lg~-~i~~lt~~~a~~lg~~----e~~p~~a~ea~mdG~~v~----------------- 302 (542)
.+...+-. .+...+.-.+|. .++....+.++.+|+. +.+|.+.-++.--|.+..
T Consensus 161 ~~~~~~~g----~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~ 236 (401)
T 1x13_A 161 TGQITAAG----KVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKV 236 (401)
T ss_dssp SCEEETTE----EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHH
T ss_pred CCceeecc----CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhh
Confidence 22111000 000001222333 7777778888888883 334544322222244322
Q ss_pred -----------ehhhhcccCcEEEEccCC-----CCccCHhHHhcCCCCcEEEccC
Q psy4626 303 -----------KLNEVIRTVDIVVTATGN-----KNVVTREHMDKMKNGCVVCNMG 342 (542)
Q Consensus 303 -----------~~~~a~~~~d~~~t~tg~-----~~vi~~~~~~~mk~gail~n~g 342 (542)
.++++++.+||||++++. +.+|+.+.++.||+|++++|.|
T Consensus 237 ~~~~~~~~~~~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 237 MSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HSHHHHHHHHHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred ccHHHHHHHHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 367888999999998643 4789999999999999999999
No 231
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=97.75 E-value=3.2e-05 Score=75.70 Aligned_cols=88 Identities=18% Similarity=0.312 Sum_probs=65.3
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCC----EEEEEeCCchhhhhhh-cCCcee-eCHHHHhcCCcEEEEcCCCcccCC---H
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGC----VIYITEIDPICALQAC-MDGFSV-VKLNEVIRTVDIVVTATGNKNVVT---R 148 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga----~Viv~d~dp~r~~~A~-~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~---~ 148 (542)
++++|||+|.+|..+++.+...|. +|+++|+++.+..... ..|..+ .+.+++++++|+||.|+- +..+. .
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~-~~~~~~v~~ 81 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIK-PDLYASIIN 81 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSC-TTTHHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeC-HHHHHHHHH
Confidence 479999999999999999999998 9999999998776543 346664 467788889999999983 33321 1
Q ss_pred HHHhccCCCeEEEeccCC
Q psy4626 149 EHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 149 e~l~~mk~GailvnvG~g 166 (542)
+....++++.+++++..+
T Consensus 82 ~l~~~l~~~~~vvs~~~g 99 (247)
T 3gt0_A 82 EIKEIIKNDAIIVTIAAG 99 (247)
T ss_dssp --CCSSCTTCEEEECSCC
T ss_pred HHHhhcCCCCEEEEecCC
Confidence 223346788888855444
No 232
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=97.75 E-value=7.5e-05 Score=76.71 Aligned_cols=101 Identities=17% Similarity=0.150 Sum_probs=69.1
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcC-ChhHHHHHHHHHhCC-CEEEEEeCCchhhhhhhcCCce-eeC----HHHHh---
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGY-GEVGKGCCQSLKGLG-CVIYITEIDPICALQACMDGFS-VVK----LNEVI--- 130 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~-G~IG~~vA~~l~~~G-a~Viv~d~dp~r~~~A~~~G~~-v~~----l~e~l--- 130 (542)
...|+++.+.. ...+|++|+|.|. |.+|..+++.++..| ++|++++ ++.+...+. .|++ +++ ..+.+
T Consensus 128 ~ta~~~l~~~~-~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~~~~~~~~~~~~~ 204 (349)
T 4a27_A 128 VTAYVMLFEVA-NLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFDRNADYVQEVKRI 204 (349)
T ss_dssp HHHHHHHHTTS-CCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEETTSCHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEcCCccHHHHHHHh
Confidence 34566664433 3458999999999 999999999999985 6899887 555655555 6764 222 22222
Q ss_pred --cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 131 --RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 131 --~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
.++|++++|+|...+ .+.++.+++++.++.+|..
T Consensus 205 ~~~g~Dvv~d~~g~~~~--~~~~~~l~~~G~~v~~G~~ 240 (349)
T 4a27_A 205 SAEGVDIVLDCLCGDNT--GKGLSLLKPLGTYILYGSS 240 (349)
T ss_dssp CTTCEEEEEEECC---------CTTEEEEEEEEEEC--
T ss_pred cCCCceEEEECCCchhH--HHHHHHhhcCCEEEEECCC
Confidence 479999999987654 4789999999999999864
No 233
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.74 E-value=5e-05 Score=76.52 Aligned_cols=104 Identities=11% Similarity=0.134 Sum_probs=71.7
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCceeeC---HHHHhcCCcEEE
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFSVVK---LNEVIRTVDIVV 137 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~v~~---l~e~l~~aDvVi 137 (542)
+++.++.+. +..+.|++++|+|+|.+|+.++..|...|+ +|+++++++.++.... ......+ +.+++.++|+||
T Consensus 103 G~~~~L~~~-~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la-~~~~~~~~~~~~~~~~~aDiVI 180 (277)
T 3don_A 103 GYVNGLKQI-YEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWS-LNINKINLSHAESHLDEFDIII 180 (277)
T ss_dssp HHHHHHHHH-STTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC-SCCEEECHHHHHHTGGGCSEEE
T ss_pred HHHHHHHHh-CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH-HhcccccHhhHHHHhcCCCEEE
Confidence 344454443 346789999999999999999999999999 9999999988765332 2333333 345578999999
Q ss_pred EcCCCc--ccCCH-HHHhccCCCeEEEeccCCC
Q psy4626 138 TATGNK--NVVTR-EHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 138 ~atG~~--~lI~~-e~l~~mk~GailvnvG~g~ 167 (542)
+||... +-... -..+.++++.+++.+...+
T Consensus 181 naTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P 213 (277)
T 3don_A 181 NTTPAGMNGNTDSVISLNRLASHTLVSDIVYNP 213 (277)
T ss_dssp ECCC-------CCSSCCTTCCSSCEEEESCCSS
T ss_pred ECccCCCCCCCcCCCCHHHcCCCCEEEEecCCC
Confidence 987421 11100 0245678888888887654
No 234
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.74 E-value=5.8e-05 Score=75.79 Aligned_cols=90 Identities=14% Similarity=0.124 Sum_probs=68.4
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCCCc----ccCCHHHHh
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATGNK----NVVTREHMD 152 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~----~lI~~e~l~ 152 (542)
|++++|+|+|.+|+.++..|...|.+|+++++++.++......|....+.+++ .++|+||+||... ..+..+.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~~~~~l-~~~DiVInaTp~Gm~~~~~l~~~~l~ 196 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPK-SAFDLIINATSASLHNELPLNKEVLK 196 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEESSCCS-SCCSEEEECCTTCCCCSCSSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEecHHHh-ccCCEEEEcccCCCCCCCCCChHHHH
Confidence 99999999999999999999999999999999998875433556565555543 3899999987421 135544332
Q ss_pred -ccCCCeEEEeccCCC
Q psy4626 153 -KMKNGCVVCNMGHSN 167 (542)
Q Consensus 153 -~mk~GailvnvG~g~ 167 (542)
.++++.+++.+...+
T Consensus 197 ~~l~~~~~v~D~vY~P 212 (269)
T 3phh_A 197 GYFKEGKLAYDLAYGF 212 (269)
T ss_dssp HHHHHCSEEEESCCSS
T ss_pred hhCCCCCEEEEeCCCC
Confidence 577888888887655
No 235
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.73 E-value=8.7e-05 Score=78.59 Aligned_cols=228 Identities=19% Similarity=0.215 Sum_probs=119.1
Q ss_pred HHHHHHHhCCCEEEEEeCCch-h----hhhhhcCCceeeCHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccC
Q psy4626 91 GCCQSLKGLGCVIYITEIDPI-C----ALQACMDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 91 ~vA~~l~~~Ga~Viv~d~dp~-r----~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~ 165 (542)
..++.|...|.+|+|= ...- . -.+....|+.+ +.++++..||+|+-.-. +. .+.++.||+|.+++..-+
T Consensus 46 ~~v~~L~~~G~~V~VE-~gaG~~~~f~D~~Y~~aGa~i-~~~~~~~~adiIlkVk~--p~--~~e~~~l~~g~~l~~~lh 119 (405)
T 4dio_A 46 ESVKKLKSLGFDVVVE-AGAGLGSRIPDQEYEKAGARV-GTAADAKTADVILKVRR--PS--AQEISGYRSGAVVIAIMD 119 (405)
T ss_dssp HHHHHHHHTTCEEEEE-TTTTGGGTCCHHHHHHTTCEE-ECGGGGGGCSEEEEEEC--CC--TTTGGGSCTTCEEEEECC
T ss_pred HHHHHHHhCCCEEEEe-CCCCccCCCCHHHHHHcCCEE-chHHhhccCCEEEEeCC--CC--hhHHhhcCCCcEEEEEec
Confidence 4566777889998774 3321 1 12234557776 55677888999876421 11 357899999999998776
Q ss_pred CC-cccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCCcccccCCCChhHHHhhHHHHHHHHHHHHhcCCCCCCC
Q psy4626 166 SN-TEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLSCSSLPSFVVSITACTQALALIELFNAPSGRYK 244 (542)
Q Consensus 166 g~-~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLvnl~~~thp~~vmd~sfa~q~la~~~L~~~~~~~~~ 244 (542)
.. +.-.+++|.++.++...-. ..++ .-..|+++-|. |+--+.-..|.|..+ +.+....+-+-
T Consensus 120 ~~~~~~l~~~l~~~~it~ia~E------~i~r-----~~ra~~l~~ls----~~s~iAGy~Av~~aa--~~l~~~~~~l~ 182 (405)
T 4dio_A 120 PYGNEEAISAMAGAGLTTFAME------LMPR-----ITRAQSMDVLS----SQANLAGYQAVIDAA--YEYDRALPMMM 182 (405)
T ss_dssp CTTCHHHHHHHHHTTCEEEEGG------GSCC-----SGGGGGGCHHH----HHHHHHHHHHHHHHH--HHCSSCSSCEE
T ss_pred cccCHHHHHHHHHCCCeEEEee------cccc-----ccccCccceec----chhHHHHHHHHHHHH--HHhHhhhchhh
Confidence 53 2233455554443332111 0010 00112333222 222212222333322 33321101111
Q ss_pred CccccCChhhHHHHHHhcCCcccc-ccccccHHHHhhcCC----CCCCCCCCCccc-------------------cCCee
Q psy4626 245 SDVYLLPKKMDEYVASLHLPTFDA-HLTELSDEQAKYMGL----NKAGPFKPSYYS-------------------MDGFS 300 (542)
Q Consensus 245 ~gv~~lp~~~d~~VA~l~L~~lg~-~i~~lt~~~a~~lg~----~e~~p~~a~ea~-------------------mdG~~ 300 (542)
.++-.+|.. +.-.+|. .++....+.++++|+ ++.+|.+.-++. .+||.
T Consensus 183 t~~g~v~~~--------kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya 254 (405)
T 4dio_A 183 TAAGTVPAA--------KIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYA 254 (405)
T ss_dssp ETTEEECCC--------EEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-------------
T ss_pred ccCCCcCCC--------EEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchh
Confidence 111111111 2223333 566666777888887 244444321111 11232
Q ss_pred e-----------eehhhhcccCcEEEEcc---C--CCCccCHhHHhcCCCCcEEEccCC---CCcccc
Q psy4626 301 V-----------VKLNEVIRTVDIVVTAT---G--NKNVVTREHMDKMKNGCVVCNMGH---SNTEID 349 (542)
Q Consensus 301 v-----------~~~~~a~~~~d~~~t~t---g--~~~vi~~~~~~~mk~gail~n~gh---~~~Ei~ 349 (542)
. ..++++++.+||||++. | .+.+|+++.++.||+|++++|.+- +++|..
T Consensus 255 ~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 255 KEMSGEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp ----CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTC
T ss_pred hhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCcccc
Confidence 1 25788999999999973 3 556899999999999999999973 344544
No 236
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.72 E-value=0.00012 Score=77.00 Aligned_cols=218 Identities=18% Similarity=0.158 Sum_probs=112.9
Q ss_pred HHHHHHHhCCCEEEEEeCCch-h----hhhhhcCCceeeCHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccC
Q psy4626 91 GCCQSLKGLGCVIYITEIDPI-C----ALQACMDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 91 ~vA~~l~~~Ga~Viv~d~dp~-r----~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~ 165 (542)
..++.|...|.+|+| +...- . -.+....|+.+. +++. ||+|+-.-. ...+.++.||+|.+++..-+
T Consensus 43 ~~v~~L~~~G~~V~V-E~gaG~~~~f~D~~Y~~aGa~i~---~~~~-adiIlkVk~----p~~~e~~~l~~g~~l~~~lh 113 (381)
T 3p2y_A 43 KVVEKLSARGLEVVV-ESAAGAGALFSDADYERAGATIG---DPWP-ADVVVKVNP----PTSDEISQLKPGSVLIGFLA 113 (381)
T ss_dssp HHHHHHHHTTCEEEE-CTTTTGGGTCCHHHHHHTTCEES---CCTT-SSEEECSSC----CCHHHHTTSCTTCEEEECCC
T ss_pred HHHHHHHhCCCEEEE-eCCCCccCCCChHHHHHCCCEEe---eeec-CCEEEEeCC----CChhHHhhccCCCEEEEEec
Confidence 456677788998776 33321 1 112234566655 3556 899865421 13578999999999998776
Q ss_pred CC-cccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCCcccccCCCChhHHHhhHHHHHHHHHHHHhcCCCCCCC
Q psy4626 166 SN-TEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLSCSSLPSFVVSITACTQALALIELFNAPSGRYK 244 (542)
Q Consensus 166 g~-~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLvnl~~~thp~~vmd~sfa~q~la~~~L~~~~~~~~~ 244 (542)
.. +.-.+++|.++.++...-. ..+. .-..++++-|. |+--+.-..|.|..+ +.+....+-+-
T Consensus 114 ~~~~~~l~~~l~~~~it~ia~E------~i~~-----~~~~~~l~~l~----~~s~iAGy~Av~~aa--~~l~~~~~~l~ 176 (381)
T 3p2y_A 114 PRTQPELASRLRIADVTAFAME------SIPR-----ISRAQTMDALS----SQANVAGYKAVLLGA--SLSTRFVPMLT 176 (381)
T ss_dssp TTTCHHHHHHHHHTTCEEEEGG------GCCS-----SGGGGGGCHHH----HHHHHHHHHHHHHHH--HHCSSCSSCEE
T ss_pred cccCHHHHHHHHHCCCeEEEee------cccc-----ccccccceeec----chhHHHHHHHHHHHH--HHhhhhhhhhh
Confidence 53 2223455554443332111 0010 00012222222 222222222333322 22221101111
Q ss_pred CccccCChhhHHHHHHhcCCcccc-ccccccHHHHhhcCCC----CCCCCCCCcccc---------------CCeee---
Q psy4626 245 SDVYLLPKKMDEYVASLHLPTFDA-HLTELSDEQAKYMGLN----KAGPFKPSYYSM---------------DGFSV--- 301 (542)
Q Consensus 245 ~gv~~lp~~~d~~VA~l~L~~lg~-~i~~lt~~~a~~lg~~----e~~p~~a~ea~m---------------dG~~v--- 301 (542)
.++-.+|.. +.-.+|. .++....+.++++|+. +.+|.+.-++.- .||..
T Consensus 177 ~~~~~v~~~--------kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~ 248 (381)
T 3p2y_A 177 TAAGTVKPA--------SALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELS 248 (381)
T ss_dssp CSSCEECCC--------EEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------C
T ss_pred cccCCcCCC--------EEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhh
Confidence 122222222 2223333 6666677778888872 333433222211 22321
Q ss_pred --------eehhhhcccCcEEEEcc---C--CCCccCHhHHhcCCCCcEEEccC
Q psy4626 302 --------VKLNEVIRTVDIVVTAT---G--NKNVVTREHMDKMKNGCVVCNMG 342 (542)
Q Consensus 302 --------~~~~~a~~~~d~~~t~t---g--~~~vi~~~~~~~mk~gail~n~g 342 (542)
..++++++.+||||++. | .+.+|+++.++.||+|++++|.+
T Consensus 249 ~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 249 EAERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 14678999999999974 3 34689999999999999999987
No 237
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.70 E-value=0.00011 Score=74.03 Aligned_cols=102 Identities=16% Similarity=0.222 Sum_probs=71.8
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhh-hcC----CceeeCHHHHhcCCcE
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQA-CMD----GFSVVKLNEVIRTVDI 135 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A-~~~----G~~v~~l~e~l~~aDv 135 (542)
+++.++.+. +..+.|++++|+|+|.+|+.++..|...|+ +|+++++++.++... ... ...+.+++++..++|+
T Consensus 112 G~~~~L~~~-~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDi 190 (281)
T 3o8q_A 112 GLVQDLLAQ-QVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDV 190 (281)
T ss_dssp HHHHHHHHT-TCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEE
T ss_pred HHHHHHHHh-CCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCE
Confidence 344455432 456789999999999999999999999997 999999998875432 211 1345566665578999
Q ss_pred EEEcCCCc-----ccCCHHHHhccCCCeEEEeccCCC
Q psy4626 136 VVTATGNK-----NVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 136 Vi~atG~~-----~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
||+||... ..+. .+.++++.+++.+...+
T Consensus 191 IInaTp~gm~~~~~~l~---~~~l~~~~~V~DlvY~P 224 (281)
T 3o8q_A 191 IINSTSASLDGELPAID---PVIFSSRSVCYDMMYGK 224 (281)
T ss_dssp EEECSCCCC----CSCC---GGGEEEEEEEEESCCCS
T ss_pred EEEcCcCCCCCCCCCCC---HHHhCcCCEEEEecCCC
Confidence 99998532 1222 24467777777776543
No 238
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=97.69 E-value=0.00011 Score=73.93 Aligned_cols=87 Identities=16% Similarity=0.181 Sum_probs=61.9
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh-----------cCC------------------ce-eeCHH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQAC-----------MDG------------------FS-VVKLN 127 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~-----------~~G------------------~~-v~~l~ 127 (542)
++|+|+|.|.+|..+|..+...|.+|+++|+++.+...+. ..| .. ..+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 6899999999999999999999999999999987654321 122 12 23566
Q ss_pred HHhcCCcEEEEcCCCcc-c---CCHHHHhccCCCeEEEecc
Q psy4626 128 EVIRTVDIVVTATGNKN-V---VTREHMDKMKNGCVVCNMG 164 (542)
Q Consensus 128 e~l~~aDvVi~atG~~~-l---I~~e~l~~mk~GailvnvG 164 (542)
++++++|+||+|..... + +-.+..+.++++++++...
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~t 136 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNT 136 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECC
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECC
Confidence 68899999999975421 1 1122233567888887433
No 239
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=97.68 E-value=8.1e-05 Score=74.67 Aligned_cols=88 Identities=15% Similarity=0.082 Sum_probs=67.3
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCC---EEEEEeCCchhhhhhhc-CCceee-CHHHHhcCCcEEEEcCCCcccCCHHHH
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGC---VIYITEIDPICALQACM-DGFSVV-KLNEVIRTVDIVVTATGNKNVVTREHM 151 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga---~Viv~d~dp~r~~~A~~-~G~~v~-~l~e~l~~aDvVi~atG~~~lI~~e~l 151 (542)
.++++|||+|.+|..++..+...|. +|+++|+++.+...... .|..+. +..++++++|+||.|+- +..+. +.+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~-p~~~~-~vl 80 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVK-PHQIK-MVC 80 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSC-GGGHH-HHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeC-HHHHH-HHH
Confidence 4689999999999999999999998 89999999988765544 377654 67788999999999983 33332 332
Q ss_pred ----hc-cCCCeEEEeccCC
Q psy4626 152 ----DK-MKNGCVVCNMGHS 166 (542)
Q Consensus 152 ----~~-mk~GailvnvG~g 166 (542)
.. ++++.+++++..+
T Consensus 81 ~~l~~~~l~~~~iiiS~~ag 100 (280)
T 3tri_A 81 EELKDILSETKILVISLAVG 100 (280)
T ss_dssp HHHHHHHHTTTCEEEECCTT
T ss_pred HHHHhhccCCCeEEEEecCC
Confidence 23 5777788766544
No 240
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=97.67 E-value=8e-05 Score=73.11 Aligned_cols=86 Identities=16% Similarity=0.255 Sum_probs=63.1
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEeC--CchhhhhhhcCCceeeCHHHHhcCCcEEEEcCCCcccCC--HHHHhcc
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGCVIYITEI--DPICALQACMDGFSVVKLNEVIRTVDIVVTATGNKNVVT--REHMDKM 154 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga~Viv~d~--dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~--~e~l~~m 154 (542)
+|+|||+|.+|..+|..|...|.+|+++|+ ++.+.......|.. .++++++..+|+||.|+....... .+..+.+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~aDvvi~~v~~~~~~~~~~~~~~~~ 80 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-ETSEEDVYSCPVVISAVTPGVALGAARRAGRHV 80 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-ECCHHHHHTSSEEEECSCGGGHHHHHHHHHTTC
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc-CCHHHHHhcCCEEEEECCCHHHHHHHHHHHHhc
Confidence 799999999999999999999999999987 55444434344666 667788889999999976543221 2334456
Q ss_pred CCCeEEEeccCCC
Q psy4626 155 KNGCVVCNMGHSN 167 (542)
Q Consensus 155 k~GailvnvG~g~ 167 (542)
++ ++++++...
T Consensus 81 ~~--~vi~~s~~~ 91 (264)
T 1i36_A 81 RG--IYVDINNIS 91 (264)
T ss_dssp CS--EEEECSCCC
T ss_pred Cc--EEEEccCCC
Confidence 66 888876543
No 241
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.67 E-value=0.00025 Score=75.91 Aligned_cols=123 Identities=15% Similarity=0.179 Sum_probs=85.2
Q ss_pred HhHHHHHHHHHHHHHhh---cCccccCcEEEEEcCChhHHHHHHHHHhCCC---EEEEEe----CC--chhh-----hh-
Q psy4626 54 DNLYMCRESIIDSLKRS---TDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC---VIYITE----ID--PICA-----LQ- 115 (542)
Q Consensus 54 d~~~g~~~s~~~ai~r~---~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga---~Viv~d----~d--p~r~-----~~- 115 (542)
|..++++...+.++.++ .+..+.+++|+|+|+|..|++++..|...|+ +|+++| ++ ..+. ..
T Consensus 160 dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~ 239 (439)
T 2dvm_A 160 DDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFP 239 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHST
T ss_pred CCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHH
Confidence 34456663333343322 3456789999999999999999999999998 899999 76 2221 10
Q ss_pred -----hhcCCc--eeeCHHHHhcCCcEEEEcCCCc-ccCCHHHHhccCCCeEEEeccCCCcccChHhhc
Q psy4626 116 -----ACMDGF--SVVKLNEVIRTVDIVVTATGNK-NVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLR 176 (542)
Q Consensus 116 -----A~~~G~--~v~~l~e~l~~aDvVi~atG~~-~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~ 176 (542)
+..... ...++.++++++|++|.+|+.+ ++++.+.++.|+++.++........+..+....
T Consensus 240 ~~~~~a~~~~~~~~~~~L~e~l~~aDVlInaT~~~~G~~~~e~v~~m~~~~iVfDLynP~~t~~~~~A~ 308 (439)
T 2dvm_A 240 YRGWLLKKTNGENIEGGPQEALKDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPLANPVPEILPEEAK 308 (439)
T ss_dssp TCHHHHTTSCTTCCCSSHHHHHTTCSEEEECSCCCSSSSCHHHHTTSCTTCEEEECCSSSCSSCHHHHH
T ss_pred HHHHHhhccccccccccHHHHhccCCEEEEcCCCccCCCChHHHHhcCCCCEEEECCCCCCcchHHHHH
Confidence 111111 1335778889999999999763 788877889999999999884333466666554
No 242
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=97.66 E-value=6.5e-05 Score=73.62 Aligned_cols=85 Identities=18% Similarity=0.234 Sum_probs=64.7
Q ss_pred EEEEEcCChhHHHHHHHHHhCC-CEEEEEeCCchhhhhhhc-CCceee-CHHHHhcCCcEEEEcCCCcccCCHHHHhccC
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLG-CVIYITEIDPICALQACM-DGFSVV-KLNEVIRTVDIVVTATGNKNVVTREHMDKMK 155 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~G-a~Viv~d~dp~r~~~A~~-~G~~v~-~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk 155 (542)
+|+|+|+|.+|..++..+...| .+|+++|+++.+...... .|..+. +.++++ .+|+||.|+. +..+ .+.+..++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~-~~v~~~l~ 78 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDM-EAACKNIR 78 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHH-HHHHTTCC
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhH-HHHHHHhc
Confidence 6999999999999999999889 899999999887654433 366543 556677 9999999986 3333 35565554
Q ss_pred C-CeEEEeccCC
Q psy4626 156 N-GCVVCNMGHS 166 (542)
Q Consensus 156 ~-GailvnvG~g 166 (542)
+ +.+++++..+
T Consensus 79 ~~~~ivv~~~~g 90 (263)
T 1yqg_A 79 TNGALVLSVAAG 90 (263)
T ss_dssp CTTCEEEECCTT
T ss_pred cCCCEEEEecCC
Confidence 2 8888887443
No 243
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=97.64 E-value=8.5e-05 Score=74.98 Aligned_cols=78 Identities=14% Similarity=0.293 Sum_probs=61.7
Q ss_pred CcEEEEEc-CChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCCCcc---cCCHHHHh
Q psy4626 77 GKQVVLCG-YGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATGNKN---VVTREHMD 152 (542)
Q Consensus 77 GktVvViG-~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~---lI~~e~l~ 152 (542)
.++|+||| +|.+|..+|..++..|.+|+++|+++.. +..+++..+|+||.|+.... ++ .+...
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~------------~~~~~~~~aDvVilavp~~~~~~vl-~~l~~ 87 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA------------VAESILANADVVIVSVPINLTLETI-ERLKP 87 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG------------GHHHHHTTCSEEEECSCGGGHHHHH-HHHGG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc------------CHHHHhcCCCEEEEeCCHHHHHHHH-HHHHh
Confidence 56899999 9999999999999999999999987642 45677889999999975433 22 23334
Q ss_pred ccCCCeEEEeccCCC
Q psy4626 153 KMKNGCVVCNMGHSN 167 (542)
Q Consensus 153 ~mk~GailvnvG~g~ 167 (542)
.+++++++++++...
T Consensus 88 ~l~~~~iv~~~~svk 102 (298)
T 2pv7_A 88 YLTENMLLADLTSVK 102 (298)
T ss_dssp GCCTTSEEEECCSCC
T ss_pred hcCCCcEEEECCCCC
Confidence 578999999987654
No 244
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.64 E-value=0.00014 Score=77.46 Aligned_cols=92 Identities=27% Similarity=0.368 Sum_probs=73.7
Q ss_pred ccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCc------hhhhhhhcCCceeeCHHHHhcCCcEEEEcCCC---c
Q psy4626 73 VMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDP------ICALQACMDGFSVVKLNEVIRTVDIVVTATGN---K 143 (542)
Q Consensus 73 ~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp------~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~---~ 143 (542)
..+.||+|+|||||.-|..-|+.||..|.+|+|-=+.. .....|..+|+.+.+..++++.||+|+..+.. +
T Consensus 33 ~~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~~~eA~~~ADvV~~L~PD~~q~ 112 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHS 112 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEEHHHHGGGCSEEEECSCGGGHH
T ss_pred HHHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecCHHHHHHhCCEEEEeCChhhHH
Confidence 35789999999999999999999999999999974311 12345788999999999999999999996542 2
Q ss_pred ccCCHHHHhccCCCeEEEeccCC
Q psy4626 144 NVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 144 ~lI~~e~l~~mk~GailvnvG~g 166 (542)
.+. .+....||+|+.+.- +||
T Consensus 113 ~vy-~~I~p~lk~G~~L~f-aHG 133 (491)
T 3ulk_A 113 DVV-RTVQPLMKDGAALGY-SHG 133 (491)
T ss_dssp HHH-HHHGGGSCTTCEEEE-SSC
T ss_pred HHH-HHHHhhCCCCCEEEe-cCc
Confidence 333 356778999999986 454
No 245
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=97.63 E-value=7.3e-05 Score=80.88 Aligned_cols=92 Identities=9% Similarity=0.162 Sum_probs=70.5
Q ss_pred ccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcC----Ccee-eCHHHHhcC---CcEEEEcCCCc---
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMD----GFSV-VKLNEVIRT---VDIVVTATGNK--- 143 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~----G~~v-~~l~e~l~~---aDvVi~atG~~--- 143 (542)
..-++|+|||+|.+|..+|..|...|.+|+++++++.+....... |... .+++++++. +|+||.++...
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 92 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGT 92 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHH
Confidence 456789999999999999999999999999999998876544332 5543 467787766 99999987542
Q ss_pred -ccCCHHHHhccCCCeEEEeccCCC
Q psy4626 144 -NVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 144 -~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
.++ .+....+++|.++++++.+.
T Consensus 93 ~~vl-~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 93 DAAI-DSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHHH-HHHGGGCCTTCEEEECSCCC
T ss_pred HHHH-HHHHhhcCCCCEEEECCCCC
Confidence 233 24456788999999998874
No 246
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.62 E-value=0.00035 Score=70.08 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=71.5
Q ss_pred HHHHHH-HHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhh-hcCC---ceeeCHHHHh-cCC
Q psy4626 61 ESIIDS-LKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQA-CMDG---FSVVKLNEVI-RTV 133 (542)
Q Consensus 61 ~s~~~a-i~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A-~~~G---~~v~~l~e~l-~~a 133 (542)
.+++.+ +. ..+..+.|++++|+|+|.+|+.++..|...|+ +|+++++++.++.+. ...+ ..+.+.+++- .++
T Consensus 104 ~G~~~~lL~-~~~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~ 182 (272)
T 3pwz_A 104 IGLLRDIEE-NLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSF 182 (272)
T ss_dssp HHHHHHHHT-TSCCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCC
T ss_pred HHHHHHHHH-HcCCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCC
Confidence 344455 43 33456789999999999999999999999997 999999999876532 2212 3445555543 789
Q ss_pred cEEEEcCCCc-----ccCCHHHHhccCCCeEEEeccCCC
Q psy4626 134 DIVVTATGNK-----NVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 134 DvVi~atG~~-----~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
|+||+||... ..+. .+.++++.+++.+...+
T Consensus 183 DivInaTp~gm~~~~~~i~---~~~l~~~~~V~DlvY~P 218 (272)
T 3pwz_A 183 DIVVNATSASLTADLPPLP---ADVLGEAALAYELAYGK 218 (272)
T ss_dssp SEEEECSSGGGGTCCCCCC---GGGGTTCSEEEESSCSC
T ss_pred CEEEECCCCCCCCCCCCCC---HHHhCcCCEEEEeecCC
Confidence 9999998531 1232 24567888887776544
No 247
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=97.62 E-value=0.00014 Score=74.33 Aligned_cols=86 Identities=12% Similarity=0.134 Sum_probs=63.9
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcC-Cc---------------eeeCHHHHhcCCcEEEEcCC
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMD-GF---------------SVVKLNEVIRTVDIVVTATG 141 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~-G~---------------~v~~l~e~l~~aDvVi~atG 141 (542)
.+|+|+|+|.+|..+|..|...|.+|+++++++.+....... +. ...++++++..+|+||.|+.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 589999999999999999999999999999998765543332 21 12356677889999999987
Q ss_pred CcccCC--HHHHhccCCCeEEEec
Q psy4626 142 NKNVVT--REHMDKMKNGCVVCNM 163 (542)
Q Consensus 142 ~~~lI~--~e~l~~mk~Gailvnv 163 (542)
+...-. .+....++++..+++.
T Consensus 85 ~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 85 AIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEES
T ss_pred chHHHHHHHHHHHhCCCCCEEEEc
Confidence 543311 1233457889988877
No 248
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=97.60 E-value=0.00015 Score=77.76 Aligned_cols=89 Identities=18% Similarity=0.223 Sum_probs=67.4
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-------------------CC-ce-eeCHHHHhcCCcEE
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-------------------DG-FS-VVKLNEVIRTVDIV 136 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-------------------~G-~~-v~~l~e~l~~aDvV 136 (542)
.+|+|+|+|.+|..+|..|...|.+|+++|+++.+...... .+ .. ..+++++++++|+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 48999999999999999999999999999999977543222 11 22 24567788999999
Q ss_pred EEcCCCcc---------cCC---HHHHhccCCCeEEEeccCC
Q psy4626 137 VTATGNKN---------VVT---REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 137 i~atG~~~---------lI~---~e~l~~mk~GailvnvG~g 166 (542)
|.|.+++. .+. .+..+.+++|.++++.+.-
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv 124 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTV 124 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred EEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeC
Confidence 99988762 121 2344568899999987753
No 249
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=97.58 E-value=0.00011 Score=79.89 Aligned_cols=90 Identities=10% Similarity=0.117 Sum_probs=70.6
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-----CCcee-eCHHHHhcC---CcEEEEcCCCc----
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-----DGFSV-VKLNEVIRT---VDIVVTATGNK---- 143 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-----~G~~v-~~l~e~l~~---aDvVi~atG~~---- 143 (542)
..+|+|||+|.+|..+|..|...|.+|+++|+++.+...... .|... .++++++.. +|+||.++...
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 458999999999999999999999999999999987765443 45543 467777765 99999987553
Q ss_pred ccCCHHHHhccCCCeEEEeccCCC
Q psy4626 144 NVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 144 ~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
.++ .+....+++|.++++++.+.
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCC
T ss_pred HHH-HHHHHhCCCCCEEEECCCCC
Confidence 233 24456788999999988764
No 250
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.57 E-value=0.00029 Score=72.09 Aligned_cols=97 Identities=23% Similarity=0.290 Sum_probs=72.0
Q ss_pred cCcEEEEEcCChhHHHHHHHHHh-CCC-EEEEEeCCchhhhhhhc----CCce--eeCHHHHhcCCcEEEEcCCCc-ccC
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKG-LGC-VIYITEIDPICALQACM----DGFS--VVKLNEVIRTVDIVVTATGNK-NVV 146 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~-~Ga-~Viv~d~dp~r~~~A~~----~G~~--v~~l~e~l~~aDvVi~atG~~-~lI 146 (542)
..++++|||.|.+|+..++.++. ++. +|.+++++ .....+.. .|.. ..+++++++++|+||+||... +++
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~~pvl 198 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRSTTPLF 198 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCSSCSS
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCCCccc
Confidence 47899999999999999998876 455 89999998 22222221 2442 348889999999999998643 455
Q ss_pred CHHHHhccCCCeEEEeccCCC---cccChHhhc
Q psy4626 147 TREHMDKMKNGCVVCNMGHSN---TEIDVNSLR 176 (542)
Q Consensus 147 ~~e~l~~mk~GailvnvG~g~---~eid~~aL~ 176 (542)
.. +.+++|..++.+|... .|++...+.
T Consensus 199 ~~---~~l~~G~~V~~vGs~~p~~~El~~~~~~ 228 (313)
T 3hdj_A 199 AG---QALRAGAFVGAIGSSLPHTRELDDEALR 228 (313)
T ss_dssp CG---GGCCTTCEEEECCCSSTTCCCCCHHHHH
T ss_pred CH---HHcCCCcEEEECCCCCCchhhcCHHHHh
Confidence 42 4689999999999863 577766554
No 251
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.56 E-value=0.00014 Score=72.21 Aligned_cols=99 Identities=21% Similarity=0.230 Sum_probs=69.9
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhc-CCc-eeeCHHHHhcCCcEEE
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACM-DGF-SVVKLNEVIRTVDIVV 137 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~-~G~-~v~~l~e~l~~aDvVi 137 (542)
.+++.++.+. .+.| +++|+|+|.+|+.++..|...|+ +|+++++++.++..... .+. ...++.+.+.++|+||
T Consensus 96 ~G~~~~l~~~---~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVI 171 (253)
T 3u62_A 96 VGVVKSLEGV---EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLF 171 (253)
T ss_dssp HHHHHHTTTC---CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEE
T ss_pred HHHHHHHHhc---CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEE
Confidence 3455555443 3578 99999999999999999999999 99999999987654222 221 2234566788999999
Q ss_pred EcCCC--c---ccCCHHHHhccCCCeEEEeccCC
Q psy4626 138 TATGN--K---NVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 138 ~atG~--~---~lI~~e~l~~mk~GailvnvG~g 166 (542)
.||.. . ..+.. +.++++.+++.+..+
T Consensus 172 natp~gm~p~~~~i~~---~~l~~~~~V~Divy~ 202 (253)
T 3u62_A 172 NTTSVGMKGEELPVSD---DSLKNLSLVYDVIYF 202 (253)
T ss_dssp ECSSTTTTSCCCSCCH---HHHTTCSEEEECSSS
T ss_pred ECCCCCCCCCCCCCCH---HHhCcCCEEEEeeCC
Confidence 98732 1 12332 345788888887765
No 252
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=97.56 E-value=0.00011 Score=79.47 Aligned_cols=90 Identities=12% Similarity=0.201 Sum_probs=70.5
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcC---Cce---eeCHHHHhc---CCcEEEEcCCCc----
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMD---GFS---VVKLNEVIR---TVDIVVTATGNK---- 143 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~---G~~---v~~l~e~l~---~aDvVi~atG~~---- 143 (542)
-++|+|||+|.+|..+|..|...|.+|+++|+++.+....... |.. ..++++++. .+|+|+.+....
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 3579999999999999999999999999999999876654433 322 356777765 699999987553
Q ss_pred ccCCHHHHhccCCCeEEEeccCCC
Q psy4626 144 NVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 144 ~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
.++ .+....|++|.+++++|...
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCC
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCC
Confidence 233 35567889999999999875
No 253
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=97.56 E-value=0.00014 Score=72.60 Aligned_cols=89 Identities=13% Similarity=0.168 Sum_probs=63.1
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-------------eCHHHHh---cCCcEEEEcCC
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-------------VKLNEVI---RTVDIVVTATG 141 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-------------~~l~e~l---~~aDvVi~atG 141 (542)
.+|+|+|+|.+|..+|..|...|.+|+++++++.+.......|... .+..++. +.+|+||.|+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 4799999999999999999999999999999987665444445332 2333433 38999999986
Q ss_pred CcccCC--HHHHhccCCCeEEEeccCC
Q psy4626 142 NKNVVT--REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 142 ~~~lI~--~e~l~~mk~GailvnvG~g 166 (542)
...+-. .+....++++.+++++..+
T Consensus 84 ~~~~~~v~~~l~~~l~~~~~iv~~~~g 110 (316)
T 2ew2_A 84 AQQLDAMFKAIQPMITEKTYVLCLLNG 110 (316)
T ss_dssp HHHHHHHHHHHGGGCCTTCEEEECCSS
T ss_pred cccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 532211 1223456788998887644
No 254
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.55 E-value=0.00022 Score=62.20 Aligned_cols=85 Identities=22% Similarity=0.319 Sum_probs=57.9
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-CCceee-----CHH---HH-hcCCcEEEEcCCCcccC
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-DGFSVV-----KLN---EV-IRTVDIVVTATGNKNVV 146 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-~G~~v~-----~l~---e~-l~~aDvVi~atG~~~lI 146 (542)
+++++|+|+|.+|+.+++.|...|.+|+++|+++.+...... .|..+. +.+ +. +.++|+||.+++....-
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 568999999999999999999999999999999876654332 354322 222 12 57899999998754221
Q ss_pred --CHHHHhccCCCeEEE
Q psy4626 147 --TREHMDKMKNGCVVC 161 (542)
Q Consensus 147 --~~e~l~~mk~Gailv 161 (542)
-.+..+.++++.+++
T Consensus 84 ~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 84 LMSSLLAKSYGINKTIA 100 (140)
T ss_dssp HHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 012344455555544
No 255
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.55 E-value=0.00018 Score=72.18 Aligned_cols=103 Identities=18% Similarity=0.135 Sum_probs=69.7
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh-cC----------CceeeCHHHHh
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQAC-MD----------GFSVVKLNEVI 130 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~-~~----------G~~v~~l~e~l 130 (542)
+++.++.+. +..+.|++++|+|.|.+|+.+|..|...| +|+++++++.++.... .. ..++.++.+.+
T Consensus 114 G~~~~L~~~-~~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 191 (287)
T 1nvt_A 114 GARMALEEE-IGRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDL 191 (287)
T ss_dssp HHHHHHHHH-HCCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCC
T ss_pred HHHHHHHHh-CCCcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhh
Confidence 344444432 23578999999999999999999999999 9999999887653221 11 11233334556
Q ss_pred cCCcEEEEcCCCccc--CCHH---HHhccCCCeEEEeccCC
Q psy4626 131 RTVDIVVTATGNKNV--VTRE---HMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 131 ~~aDvVi~atG~~~l--I~~e---~l~~mk~GailvnvG~g 166 (542)
.++|++|.++|.... .+.. ..+.++++.+++++...
T Consensus 192 ~~~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~ 232 (287)
T 1nvt_A 192 DGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYN 232 (287)
T ss_dssp TTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCS
T ss_pred CCCCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeeeC
Confidence 789999999874321 0000 13567888888888754
No 256
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=97.54 E-value=0.00024 Score=76.38 Aligned_cols=90 Identities=12% Similarity=0.206 Sum_probs=66.7
Q ss_pred cEEEEEcCChhHHHHHHHHHhC--CCEEEEEeCCchhhhhhhc-------------------CCcee-eCHHHHhcCCcE
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGL--GCVIYITEIDPICALQACM-------------------DGFSV-VKLNEVIRTVDI 135 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~--Ga~Viv~d~dp~r~~~A~~-------------------~G~~v-~~l~e~l~~aDv 135 (542)
.+|+|+|+|.+|..+|..|... |.+|+++|+++.+...... .+... .++.++++++|+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 4899999999999999999888 7899999999876543211 23333 356778889999
Q ss_pred EEEcCCCcccCC-----------------HHHHhccCCCeEEEeccCCC
Q psy4626 136 VVTATGNKNVVT-----------------REHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 136 Vi~atG~~~lI~-----------------~e~l~~mk~GailvnvG~g~ 167 (542)
||.|.+++.-.+ .+..+.+++|.++++.+...
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~ 134 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVP 134 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCC
Confidence 999987654221 12345689999999876543
No 257
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=97.53 E-value=0.0002 Score=76.28 Aligned_cols=88 Identities=16% Similarity=0.234 Sum_probs=65.5
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-------------------CC-ce-eeCHHHHhcCCcEEE
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-------------------DG-FS-VVKLNEVIRTVDIVV 137 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-------------------~G-~~-v~~l~e~l~~aDvVi 137 (542)
+|+|+|+|.+|..+|..|...|.+|+++|+++.+...... .| .. ..+++++++.+|+||
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvvi 81 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVSF 81 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEEE
Confidence 6999999999999999999999999999999987654322 22 22 235667788999999
Q ss_pred EcCCCccc---------CC---HHHHhccCC---CeEEEeccCC
Q psy4626 138 TATGNKNV---------VT---REHMDKMKN---GCVVCNMGHS 166 (542)
Q Consensus 138 ~atG~~~l---------I~---~e~l~~mk~---GailvnvG~g 166 (542)
.|++++.- +. .+..+.+++ +.++++.+..
T Consensus 82 iaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv 125 (436)
T 1mv8_A 82 ICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTV 125 (436)
T ss_dssp ECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCC
T ss_pred EEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCc
Confidence 99876542 21 122345678 8999987543
No 258
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.53 E-value=0.0003 Score=73.08 Aligned_cols=99 Identities=24% Similarity=0.423 Sum_probs=73.0
Q ss_pred ccCcEEEEEcCChhHHHHHHHHH-hCCC-EEEEEeCCchhhhhhhcC-----Cce---eeCHHHHhcCCcEEEEcCCCc-
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLK-GLGC-VIYITEIDPICALQACMD-----GFS---VVKLNEVIRTVDIVVTATGNK- 143 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~-~~Ga-~Viv~d~dp~r~~~A~~~-----G~~---v~~l~e~l~~aDvVi~atG~~- 143 (542)
...++++|||+|.+|+..+..+. ..+. +|.++++++.++...... |.. +.++++++.++|+||+||.+.
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~ 206 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA 206 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC
Confidence 35789999999999999988764 4554 899999999876543221 532 246788899999999998753
Q ss_pred --ccCCHHHHhccCCCeEEEeccCCC---cccChHhhc
Q psy4626 144 --NVVTREHMDKMKNGCVVCNMGHSN---TEIDVNSLR 176 (542)
Q Consensus 144 --~lI~~e~l~~mk~GailvnvG~g~---~eid~~aL~ 176 (542)
+++.. +.+++|..++.+|... .|++...+.
T Consensus 207 ~~pvl~~---~~l~~G~~V~~vgs~~p~~~El~~~~~~ 241 (350)
T 1x7d_A 207 YATIITP---DMLEPGMHLNAVGGDCPGKTELHADVLR 241 (350)
T ss_dssp EEEEECG---GGCCTTCEEEECSCCBTTBEEECHHHHH
T ss_pred CCceecH---HHcCCCCEEEECCCCCCCceeeCHHHHh
Confidence 44542 5689999999999752 566655444
No 259
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=97.52 E-value=0.0001 Score=70.58 Aligned_cols=76 Identities=16% Similarity=0.312 Sum_probs=54.9
Q ss_pred CccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCCCcccCC---H
Q psy4626 72 DVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATGNKNVVT---R 148 (542)
Q Consensus 72 ~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~---~ 148 (542)
+..+.+++++|+|+|.+|..+|..|...|.+|+++|+++. .++++|+||.|+... .+. .
T Consensus 14 ~~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-----------------~~~~aD~vi~av~~~-~~~~v~~ 75 (209)
T 2raf_A 14 NLYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------------ATTLGEIVIMAVPYP-ALAALAK 75 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-----------------CSSCCSEEEECSCHH-HHHHHHH
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-----------------HhccCCEEEEcCCcH-HHHHHHH
Confidence 4567889999999999999999999999999999997653 457899999998632 221 1
Q ss_pred HHHhccCCCeEEEeccCC
Q psy4626 149 EHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 149 e~l~~mk~GailvnvG~g 166 (542)
+....++ +.++++++.+
T Consensus 76 ~l~~~~~-~~~vi~~~~g 92 (209)
T 2raf_A 76 QYATQLK-GKIVVDITNP 92 (209)
T ss_dssp HTHHHHT-TSEEEECCCC
T ss_pred HHHHhcC-CCEEEEECCC
Confidence 2223456 8899988775
No 260
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=97.50 E-value=0.00014 Score=74.21 Aligned_cols=89 Identities=13% Similarity=0.176 Sum_probs=66.4
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCC----CEEEEEeCCch--hhhhhhcCCceee-CHHHHhcCCcEEEEcCCCcccCC--
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLG----CVIYITEIDPI--CALQACMDGFSVV-KLNEVIRTVDIVVTATGNKNVVT-- 147 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~G----a~Viv~d~dp~--r~~~A~~~G~~v~-~l~e~l~~aDvVi~atG~~~lI~-- 147 (542)
-.+|+|||+|.+|..+|..|...| .+|+++++++. +.......|..+. +..++++.+|+||.|+.. ..+.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~~-~~~~~v 100 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKP-HIIPFI 100 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSCG-GGHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeCH-HHHHHH
Confidence 457999999999999999999999 68999999885 4444445577654 567788899999999853 3332
Q ss_pred -HHHHhccCCCeEEEeccCC
Q psy4626 148 -REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 148 -~e~l~~mk~GailvnvG~g 166 (542)
.+....++++.+++++..+
T Consensus 101 l~~l~~~l~~~~ivvs~s~g 120 (322)
T 2izz_A 101 LDEIGADIEDRHIVVSCAAG 120 (322)
T ss_dssp HHHHGGGCCTTCEEEECCTT
T ss_pred HHHHHhhcCCCCEEEEeCCC
Confidence 1222356788899987544
No 261
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=97.49 E-value=0.00076 Score=69.28 Aligned_cols=89 Identities=18% Similarity=0.238 Sum_probs=61.6
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh-----------cCC----c-----------eeeCHHHHh
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQAC-----------MDG----F-----------SVVKLNEVI 130 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~-----------~~G----~-----------~v~~l~e~l 130 (542)
-.+|+|+|+|.+|.++|+.+...|.+|+++|++|.....+. ..| . ...++.+++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 45899999999999999999999999999999986533221 111 0 123567788
Q ss_pred cCCcEEEEcCCCcccCCHHHH----hccCCCeEEE-eccC
Q psy4626 131 RTVDIVVTATGNKNVVTREHM----DKMKNGCVVC-NMGH 165 (542)
Q Consensus 131 ~~aDvVi~atG~~~lI~~e~l----~~mk~Gailv-nvG~ 165 (542)
+++|+||++.--.--+..+.| +.+++++++. |++.
T Consensus 86 ~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs 125 (319)
T 3ado_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred ccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh
Confidence 999999998632111222233 3468999988 5443
No 262
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=97.49 E-value=0.00014 Score=78.49 Aligned_cols=90 Identities=10% Similarity=0.165 Sum_probs=68.2
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcC----Ccee-eCHHHHhcC---CcEEEEcCCCcccCC--
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMD----GFSV-VKLNEVIRT---VDIVVTATGNKNVVT-- 147 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~----G~~v-~~l~e~l~~---aDvVi~atG~~~lI~-- 147 (542)
.+|+|||+|.+|..+|..+...|.+|.++|+++.+....... |... .++++++.. +|+||.++.....+.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 479999999999999999999999999999998776543322 5543 467777765 999999876532221
Q ss_pred -HHHHhccCCCeEEEeccCCC
Q psy4626 148 -REHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 148 -~e~l~~mk~GailvnvG~g~ 167 (542)
.+....+++|.++++++.+.
T Consensus 86 l~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 86 IKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp HHHHGGGCCTTCEEEECSCCC
T ss_pred HHHHHhhCCCCCEEEECCCCC
Confidence 23345688999999988764
No 263
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.48 E-value=0.00012 Score=69.36 Aligned_cols=85 Identities=20% Similarity=0.178 Sum_probs=62.6
Q ss_pred EEEEEc-CChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-CC-------ceeeCHHHHhcCCcEEEEcCCCcccCCHH
Q psy4626 79 QVVLCG-YGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-DG-------FSVVKLNEVIRTVDIVVTATGNKNVVTRE 149 (542)
Q Consensus 79 tVvViG-~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-~G-------~~v~~l~e~l~~aDvVi~atG~~~lI~~e 149 (542)
+++|+| +|.+|..++..|...|.+|+++++++.+...... .+ ....+++++++++|+||.|+.... + .+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~~~-~-~~ 79 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEH-A-ID 79 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHH-H-HH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCChhh-H-HH
Confidence 689999 9999999999999999999999998876543221 12 333466778889999999986432 2 13
Q ss_pred HHh----ccCCCeEEEeccCC
Q psy4626 150 HMD----KMKNGCVVCNMGHS 166 (542)
Q Consensus 150 ~l~----~mk~GailvnvG~g 166 (542)
.++ .+ ++.++++++.+
T Consensus 80 ~~~~l~~~~-~~~~vi~~~~g 99 (212)
T 1jay_A 80 TARDLKNIL-REKIVVSPLVP 99 (212)
T ss_dssp HHHHTHHHH-TTSEEEECCCC
T ss_pred HHHHHHHHc-CCCEEEEcCCC
Confidence 332 34 48899988865
No 264
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=97.48 E-value=0.00026 Score=71.57 Aligned_cols=86 Identities=13% Similarity=0.174 Sum_probs=62.9
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEeC--CchhhhhhhcCCc-----------eee---CHHHHhcCCcEEEEcCCC
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGCVIYITEI--DPICALQACMDGF-----------SVV---KLNEVIRTVDIVVTATGN 142 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga~Viv~d~--dp~r~~~A~~~G~-----------~v~---~l~e~l~~aDvVi~atG~ 142 (542)
+|+|+|+|.+|..+|..|...|.+|+++++ ++.+.......|. .+. ++.++++.+|+||.|+..
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~ 81 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVST 81 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSCG
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCCh
Confidence 699999999999999999999999999999 8776554444442 333 456778899999999865
Q ss_pred cccCC--HHHHhccCCCeEEEeccC
Q psy4626 143 KNVVT--REHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 143 ~~lI~--~e~l~~mk~GailvnvG~ 165 (542)
..+-. .+... ++++.+++++..
T Consensus 82 ~~~~~v~~~i~~-l~~~~~vv~~~n 105 (335)
T 1txg_A 82 DGVLPVMSRILP-YLKDQYIVLISK 105 (335)
T ss_dssp GGHHHHHHHHTT-TCCSCEEEECCC
T ss_pred HHHHHHHHHHhc-CCCCCEEEEEcC
Confidence 43211 12233 677888887753
No 265
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.46 E-value=0.00053 Score=70.24 Aligned_cols=96 Identities=20% Similarity=0.229 Sum_probs=70.2
Q ss_pred cCcEEEEEcCChhHHHHHHHHHh-CCC-EEEEEeCCchhhhhhhc-C-----CceeeCHHHHhcCCcEEEEcCCCc-ccC
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKG-LGC-VIYITEIDPICALQACM-D-----GFSVVKLNEVIRTVDIVVTATGNK-NVV 146 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~-~Ga-~Viv~d~dp~r~~~A~~-~-----G~~v~~l~e~l~~aDvVi~atG~~-~lI 146 (542)
..++++|+|+|.+|+..++.+.. .+. +|.++++++.++..... . ...+.++++++ ++|+|++||.+. +++
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~~pv~ 202 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSRKPVV 202 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCSSCCB
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCCCcee
Confidence 57899999999999999998876 454 89999999987653321 1 12245678888 999999988643 344
Q ss_pred CHHHHhccCCCeEEEeccCCC---cccChHhh
Q psy4626 147 TREHMDKMKNGCVVCNMGHSN---TEIDVNSL 175 (542)
Q Consensus 147 ~~e~l~~mk~GailvnvG~g~---~eid~~aL 175 (542)
. .+.+++|..++.+|... .|++...+
T Consensus 203 ~---~~~l~~G~~V~~ig~~~p~~~el~~~~~ 231 (322)
T 1omo_A 203 K---AEWVEEGTHINAIGADGPGKQELDVEIL 231 (322)
T ss_dssp C---GGGCCTTCEEEECSCCSTTCCCBCHHHH
T ss_pred c---HHHcCCCeEEEECCCCCCCccccCHHHH
Confidence 3 25689999999998763 45554433
No 266
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.46 E-value=0.00046 Score=70.78 Aligned_cols=104 Identities=20% Similarity=0.246 Sum_probs=69.3
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCC---chhhhhhh-c----CCc--eeeC----
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEID---PICALQAC-M----DGF--SVVK---- 125 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~d---p~r~~~A~-~----~G~--~v~~---- 125 (542)
.+++.++.+. +..+.|++++|+|+|.+|+.++..|...|+ +|++++++ +.++.+.. . .+. .+.+
T Consensus 139 ~Gf~~~L~~~-~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~ 217 (315)
T 3tnl_A 139 TGYMRALKEA-GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDH 217 (315)
T ss_dssp HHHHHHHHHT-TCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH
T ss_pred HHHHHHHHHc-CCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchH
Confidence 3344555442 456889999999999999999999999999 99999999 55543211 1 122 2332
Q ss_pred --HHHHhcCCcEEEEcCCC--cc-----cCCHHHHhccCCCeEEEeccCCC
Q psy4626 126 --LNEVIRTVDIVVTATGN--KN-----VVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 126 --l~e~l~~aDvVi~atG~--~~-----lI~~e~l~~mk~GailvnvG~g~ 167 (542)
+.+.+.++|+||.||.. .+ .+. ..+.++++.+++.+--.+
T Consensus 218 ~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P 266 (315)
T 3tnl_A 218 EQLRKEIAESVIFTNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKP 266 (315)
T ss_dssp HHHHHHHHTCSEEEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSS
T ss_pred HHHHhhhcCCCEEEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCC
Confidence 23456789999998742 11 110 234567777777766544
No 267
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=97.46 E-value=0.00019 Score=77.58 Aligned_cols=90 Identities=12% Similarity=0.161 Sum_probs=68.6
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-----CCce-eeCHHHHh---cCCcEEEEcCCCcccCC-
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-----DGFS-VVKLNEVI---RTVDIVVTATGNKNVVT- 147 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-----~G~~-v~~l~e~l---~~aDvVi~atG~~~lI~- 147 (542)
.+|+|||+|.+|..+|..|...|.+|.++|+++.+...... .|.. ..++++++ +.+|+||.++.+...+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 36999999999999999999999999999999887655443 4554 34677776 48999999876532221
Q ss_pred --HHHHhccCCCeEEEeccCCC
Q psy4626 148 --REHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 148 --~e~l~~mk~GailvnvG~g~ 167 (542)
.+....+++|.++++++.+.
T Consensus 83 vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 83 FIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp HHHHHHHHCCTTCEEEECSCCC
T ss_pred HHHHHHhhcCCCCEEEECCCCC
Confidence 23445688999999987764
No 268
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=97.44 E-value=0.00037 Score=74.48 Aligned_cols=88 Identities=16% Similarity=0.135 Sum_probs=65.8
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc------------------CCcee-eCHHHHhcCCcEEE
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM------------------DGFSV-VKLNEVIRTVDIVV 137 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~------------------~G~~v-~~l~e~l~~aDvVi 137 (542)
-.+|+|+|.|.+|..+|..+.. |.+|+++|+++.+...... .+... .+++++++++|+||
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDvVi 114 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADYVI 114 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCEEE
Confidence 3489999999999999999987 9999999999987653322 12333 35678899999999
Q ss_pred EcCCCcc----------cCC---HHHHhccCCCeEEEeccCC
Q psy4626 138 TATGNKN----------VVT---REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 138 ~atG~~~----------lI~---~e~l~~mk~GailvnvG~g 166 (542)
.|+.++. .+. ....+ +++|.++++.+.-
T Consensus 115 iaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv 155 (432)
T 3pid_A 115 IATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTI 155 (432)
T ss_dssp ECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCC
T ss_pred EeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCC
Confidence 9987652 111 23345 8999999987754
No 269
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=97.41 E-value=0.00036 Score=75.14 Aligned_cols=87 Identities=13% Similarity=0.153 Sum_probs=62.1
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhh--------hhhcCCc-------------e-eeCHHHHhcCCcE
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICAL--------QACMDGF-------------S-VVKLNEVIRTVDI 135 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~--------~A~~~G~-------------~-v~~l~e~l~~aDv 135 (542)
++|+|||.|.+|.++|+.+...|.+|+++|+++.+.. .+...|. . ..++ +.+++||+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl-~al~~aDl 133 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDF-HKLSNCDL 133 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCG-GGCTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCH-HHHccCCE
Confidence 6899999999999999999999999999999987422 1222232 1 2344 36789999
Q ss_pred EEEcCCCcccCC----HHHHhccCCCeEEE-eccC
Q psy4626 136 VVTATGNKNVVT----REHMDKMKNGCVVC-NMGH 165 (542)
Q Consensus 136 Vi~atG~~~lI~----~e~l~~mk~Gailv-nvG~ 165 (542)
||+|.....-+. .+..+.++++++++ |++.
T Consensus 134 VIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSs 168 (460)
T 3k6j_A 134 IVESVIEDMKLKKELFANLENICKSTCIFGTNTSS 168 (460)
T ss_dssp EEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS
T ss_pred EEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCC
Confidence 999975421111 23445679999996 5553
No 270
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.38 E-value=0.00033 Score=70.69 Aligned_cols=102 Identities=19% Similarity=0.127 Sum_probs=69.0
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhh-hcC-----C--ceee---CHHHH
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQA-CMD-----G--FSVV---KLNEV 129 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A-~~~-----G--~~v~---~l~e~ 129 (542)
+++.++.+. +..+.|++++|+|+|.+|+.++..|...|+ +|+++++++.++... ... + .... ++.+.
T Consensus 113 G~~~~l~~~-~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~ 191 (283)
T 3jyo_A 113 GFGRGMEEG-LPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDV 191 (283)
T ss_dssp HHHHHHHHH-CTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHH
T ss_pred HHHHHHHHh-CcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHH
Confidence 344454433 245789999999999999999999999999 899999998876432 111 1 1122 45567
Q ss_pred hcCCcEEEEcCCC--cc----cCCHHHHhccCCCeEEEeccCCC
Q psy4626 130 IRTVDIVVTATGN--KN----VVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 130 l~~aDvVi~atG~--~~----lI~~e~l~~mk~GailvnvG~g~ 167 (542)
+.++|+||+||.. .+ .+. .+.++++.++..+-..+
T Consensus 192 l~~~DiVInaTp~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P 232 (283)
T 3jyo_A 192 IAAADGVVNATPMGMPAHPGTAFD---VSCLTKDHWVGDVVYMP 232 (283)
T ss_dssp HHHSSEEEECSSTTSTTSCSCSSC---GGGCCTTCEEEECCCSS
T ss_pred HhcCCEEEECCCCCCCCCCCCCCC---HHHhCCCCEEEEecCCC
Confidence 7899999998742 11 122 34466777766655443
No 271
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.38 E-value=0.00041 Score=62.51 Aligned_cols=67 Identities=16% Similarity=0.204 Sum_probs=49.7
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCc-hhh---hhhhcCCceee-----C---HHHH-hcCCcEEEEcCCCc
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDP-ICA---LQACMDGFSVV-----K---LNEV-IRTVDIVVTATGNK 143 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp-~r~---~~A~~~G~~v~-----~---l~e~-l~~aDvVi~atG~~ 143 (542)
.++++|+|+|.+|+.+++.|...|.+|+++|.++ .+. ......|+.++ + +.++ +.++|+|+.+++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 5679999999999999999999999999999985 322 12223455543 1 2333 67899999998754
No 272
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=97.36 E-value=0.0005 Score=78.76 Aligned_cols=90 Identities=18% Similarity=0.293 Sum_probs=69.1
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-ee-----CHHHHh------cCCcEEEEcC
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-VV-----KLNEVI------RTVDIVVTAT 140 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-v~-----~l~e~l------~~aDvVi~at 140 (542)
..+|++|+|.|. |.||+..++.++.+|++|+++..++ +.. ....|.+ +. ++.+.+ +++|+|+++.
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~-~l~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~ 420 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQ-AVELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSL 420 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGG-GSCSCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhh-hhhcChhheeecCChhHHHHHHHHcCCCCeEEEEECC
Confidence 468999999996 9999999999999999999998655 333 2235654 22 222222 4799999998
Q ss_pred CCcccCCHHHHhccCCCeEEEeccCCC
Q psy4626 141 GNKNVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 141 G~~~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
|. ..+ .+.++.++++++++.+|..+
T Consensus 421 gg-~~~-~~~l~~l~~~Gr~v~iG~~~ 445 (795)
T 3slk_A 421 AG-EFA-DASLRMLPRGGRFLELGKTD 445 (795)
T ss_dssp CT-TTT-HHHHTSCTTCEEEEECCSTT
T ss_pred Cc-HHH-HHHHHHhcCCCEEEEecccc
Confidence 76 345 57899999999999999764
No 273
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.35 E-value=0.00081 Score=67.89 Aligned_cols=101 Identities=17% Similarity=0.190 Sum_probs=69.5
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcCCceeeCHHHH--hcCCcEEE
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQACMDGFSVVKLNEV--IRTVDIVV 137 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~~~G~~v~~l~e~--l~~aDvVi 137 (542)
.+++.++.+. +..+.|++++|+|+|.+|+.++..|...|+ +|+++++++.++... ...+...+.+++ + ++|+||
T Consensus 107 ~G~~~~L~~~-~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~L-a~~~~~~~~~~l~~l-~~DivI 183 (282)
T 3fbt_A 107 IGFGKMLSKF-RVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI-YGEFKVISYDELSNL-KGDVII 183 (282)
T ss_dssp HHHHHHHHHT-TCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHH-CTTSEEEEHHHHTTC-CCSEEE
T ss_pred HHHHHHHHHc-CCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH-HHhcCcccHHHHHhc-cCCEEE
Confidence 3344455443 456789999999999999999999999999 999999999876432 223333333322 4 899999
Q ss_pred EcCCC--cc-----cCCHHHHhccCCCeEEEeccCCC
Q psy4626 138 TATGN--KN-----VVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 138 ~atG~--~~-----lI~~e~l~~mk~GailvnvG~g~ 167 (542)
+||.. .+ .+. .+.++++.+++.+.-.+
T Consensus 184 naTp~Gm~~~~~~~pi~---~~~l~~~~~v~DlvY~P 217 (282)
T 3fbt_A 184 NCTPKGMYPKEGESPVD---KEVVAKFSSAVDLIYNP 217 (282)
T ss_dssp ECSSTTSTTSTTCCSSC---HHHHTTCSEEEESCCSS
T ss_pred ECCccCccCCCccCCCC---HHHcCCCCEEEEEeeCC
Confidence 98832 11 132 33457788877776544
No 274
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.35 E-value=0.00054 Score=69.93 Aligned_cols=87 Identities=21% Similarity=0.223 Sum_probs=65.4
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCC-----------cee-eCHHHHhcCCcEEEEcCCCcc
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDG-----------FSV-VKLNEVIRTVDIVVTATGNKN 144 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G-----------~~v-~~l~e~l~~aDvVi~atG~~~ 144 (542)
-.+++|+|+|.+|..+|..|...|.+|+++++++.+.......| ..+ .++++ +..+|+||.|+...
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~~- 91 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPVQ- 91 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCGG-
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCHH-
Confidence 45899999999999999999999999999999887654333333 232 35666 88999999998653
Q ss_pred cCCHHHHhccC-CCeEEEeccCC
Q psy4626 145 VVTREHMDKMK-NGCVVCNMGHS 166 (542)
Q Consensus 145 lI~~e~l~~mk-~GailvnvG~g 166 (542)
.+ .+.++.++ ++.+++++.-+
T Consensus 92 ~~-~~v~~~l~~~~~~vv~~~nG 113 (335)
T 1z82_A 92 YI-REHLLRLPVKPSMVLNLSKG 113 (335)
T ss_dssp GH-HHHHTTCSSCCSEEEECCCC
T ss_pred HH-HHHHHHhCcCCCEEEEEeCC
Confidence 33 35666665 67788877644
No 275
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=97.35 E-value=0.00057 Score=73.28 Aligned_cols=90 Identities=20% Similarity=0.257 Sum_probs=68.2
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-------------------CC-ce-eeCHHHHhcCCcE
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-------------------DG-FS-VVKLNEVIRTVDI 135 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-------------------~G-~~-v~~l~e~l~~aDv 135 (542)
.-+++|+|.|.+|..+|..|...|.+|++||+++.+...... .| .. ..++.+++++||+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv 87 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA 87 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence 348999999999999999999999999999999987653222 11 23 2456788899999
Q ss_pred EEEcCCCccc----------CC---HHHHhccCCCeEEEeccCC
Q psy4626 136 VVTATGNKNV----------VT---REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 136 Vi~atG~~~l----------I~---~e~l~~mk~GailvnvG~g 166 (542)
||.|.+++.- +. ....+.+++|.++++.+.-
T Consensus 88 vii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv 131 (446)
T 4a7p_A 88 VFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTV 131 (446)
T ss_dssp EEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCC
T ss_pred EEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 9999776531 21 2345678999999987743
No 276
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=97.35 E-value=0.00045 Score=74.64 Aligned_cols=89 Identities=17% Similarity=0.208 Sum_probs=66.2
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcC-------C-------------ce-eeCHHHHhcCCcE
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMD-------G-------------FS-VVKLNEVIRTVDI 135 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~-------G-------------~~-v~~l~e~l~~aDv 135 (542)
..+|+|+|.|.+|..+|..|...|.+|+++|+++.+....... | .. ..+++++++.+|+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 4689999999999999999999999999999998776543222 2 12 2245567889999
Q ss_pred EEEcCCCc---------ccCC---HHHHhccCCCeEEEeccC
Q psy4626 136 VVTATGNK---------NVVT---REHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 136 Vi~atG~~---------~lI~---~e~l~~mk~GailvnvG~ 165 (542)
||.|.+++ ..+. .+..+.++++.++++.+.
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ST 129 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKST 129 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred EEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 99998774 1221 223346889999998764
No 277
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=97.34 E-value=0.00029 Score=76.30 Aligned_cols=87 Identities=16% Similarity=0.281 Sum_probs=63.6
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-----------CCc-------------e-eeCHHHHhcC
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-----------DGF-------------S-VVKLNEVIRT 132 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-----------~G~-------------~-v~~l~e~l~~ 132 (542)
++|+|||.|.+|.++|+.+...|.+|+++|+++.+...+.. .|. . ..++ +.+++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 84 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDI-HALAA 84 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCG-GGGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCH-HHhcC
Confidence 57999999999999999999999999999999987654322 231 1 2234 35789
Q ss_pred CcEEEEcCCCc-----ccCCHHHHhccCCCeEEE-eccCC
Q psy4626 133 VDIVVTATGNK-----NVVTREHMDKMKNGCVVC-NMGHS 166 (542)
Q Consensus 133 aDvVi~atG~~-----~lI~~e~l~~mk~Gailv-nvG~g 166 (542)
||+||+|.... .++ .+..+.++++++++ |++.-
T Consensus 85 aDlVIeAVpe~~~vk~~v~-~~l~~~~~~~~IlasntSti 123 (483)
T 3mog_A 85 ADLVIEAASERLEVKKALF-AQLAEVCPPQTLLTTNTSSI 123 (483)
T ss_dssp CSEEEECCCCCHHHHHHHH-HHHHHHSCTTCEEEECCSSS
T ss_pred CCEEEEcCCCcHHHHHHHH-HHHHHhhccCcEEEecCCCC
Confidence 99999997543 122 23445679999985 66643
No 278
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=97.33 E-value=0.00077 Score=72.91 Aligned_cols=90 Identities=17% Similarity=0.051 Sum_probs=66.2
Q ss_pred CcEEEEEcCChhHHHHHHHHHhC-CC-EEEEEeCCch----hhhhhhc---------------------CC-ceeeCHHH
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGL-GC-VIYITEIDPI----CALQACM---------------------DG-FSVVKLNE 128 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~-Ga-~Viv~d~dp~----r~~~A~~---------------------~G-~~v~~l~e 128 (542)
-++|+|+|.|.+|..+|..+... |. +|+++|+++. +...... .| ....+..+
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~e 97 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFS 97 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcHH
Confidence 46899999999999999999999 99 9999999998 5432211 12 22223356
Q ss_pred HhcCCcEEEEcCCCcccC------C--------HHHHhccCCCeEEEeccCC
Q psy4626 129 VIRTVDIVVTATGNKNVV------T--------REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 129 ~l~~aDvVi~atG~~~lI------~--------~e~l~~mk~GailvnvG~g 166 (542)
++++||+||.|.+++... + ....+.+++|.++++.+.-
T Consensus 98 a~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv 149 (478)
T 3g79_A 98 RISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTI 149 (478)
T ss_dssp GGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCC
T ss_pred HHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCC
Confidence 788999999998775311 0 2345668999999987754
No 279
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=97.31 E-value=0.00031 Score=73.04 Aligned_cols=90 Identities=9% Similarity=0.061 Sum_probs=66.0
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCC--------------ce-eeCHHHHhcCCcEEEEcCC
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDG--------------FS-VVKLNEVIRTVDIVVTATG 141 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G--------------~~-v~~l~e~l~~aDvVi~atG 141 (542)
-.+|+|+|+|.+|..+|..|...|.+|.+|++++.+.......+ .. ..+++++++++|+||.++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp 108 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVP 108 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCC
Confidence 35899999999999999999999999999999987654332222 12 2356788899999999976
Q ss_pred CcccCC--HHHHhccCCCeEEEeccCC
Q psy4626 142 NKNVVT--REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 142 ~~~lI~--~e~l~~mk~GailvnvG~g 166 (542)
...+-. .+....++++.+++++.-|
T Consensus 109 ~~~~~~vl~~i~~~l~~~~ivvs~~kG 135 (356)
T 3k96_A 109 SFAFHEVITRMKPLIDAKTRIAWGTKG 135 (356)
T ss_dssp HHHHHHHHHHHGGGCCTTCEEEECCCS
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 432210 2333457789999887655
No 280
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.27 E-value=0.00059 Score=69.86 Aligned_cols=104 Identities=18% Similarity=0.151 Sum_probs=67.1
Q ss_pred HHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCC---chhhhhh-h----cCCc--eeeC---H-
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEID---PICALQA-C----MDGF--SVVK---L- 126 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~d---p~r~~~A-~----~~G~--~v~~---l- 126 (542)
+++.++.+. +..+.|++++|+|+|.+|+.++..|...|+ +|++++++ +.++.+. . ..+. .+.+ +
T Consensus 134 Gf~~~L~~~-~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~ 212 (312)
T 3t4e_A 134 GHIRAIKES-GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQH 212 (312)
T ss_dssp HHHHHHHHT-TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHH
T ss_pred HHHHHHHhc-CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhh
Confidence 344455443 456789999999999999999999999999 89999999 5554321 1 1122 2222 2
Q ss_pred --HHHhcCCcEEEEcCCCcccC--CHH----HHhccCCCeEEEeccCCC
Q psy4626 127 --NEVIRTVDIVVTATGNKNVV--TRE----HMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 127 --~e~l~~aDvVi~atG~~~lI--~~e----~l~~mk~GailvnvG~g~ 167 (542)
.+.+.++|+||+||.. ++- ... ..+.++++.++..+--.+
T Consensus 213 ~~~~~l~~~DiIINaTp~-Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P 260 (312)
T 3t4e_A 213 AFTEALASADILTNGTKV-GMKPLENESLIGDVSLLRPELLVTECVYNP 260 (312)
T ss_dssp HHHHHHHHCSEEEECSST-TSTTSTTCCSCCCGGGSCTTCEEEECCCSS
T ss_pred hhHhhccCceEEEECCcC-CCCCCCCCcccCCHHHcCCCCEEEEeccCC
Confidence 3456789999998742 110 000 123456666666655443
No 281
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=97.26 E-value=0.00031 Score=75.90 Aligned_cols=89 Identities=8% Similarity=0.123 Sum_probs=66.6
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-CC-------ce-eeCHHHHhc---CCcEEEEcCCCcccC
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-DG-------FS-VVKLNEVIR---TVDIVVTATGNKNVV 146 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-~G-------~~-v~~l~e~l~---~aDvVi~atG~~~lI 146 (542)
+|+|+|+|.+|..+|..+...|.+|.++|+++.+...... .| .. ..++++++. .+|+||.++.....+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~v 82 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT 82 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHHH
Confidence 6999999999999999999999999999999877654332 24 33 346777765 599999987653222
Q ss_pred C---HHHHhccCCCeEEEeccCCC
Q psy4626 147 T---REHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 147 ~---~e~l~~mk~GailvnvG~g~ 167 (542)
. .+....+++|.++++++.+.
T Consensus 83 ~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 83 DSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHHHHHHHHHCCTTCEEEECCCCC
T ss_pred HHHHHHHHhhCCCCCEEEECCCCC
Confidence 1 23445678999999988764
No 282
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=97.25 E-value=0.00038 Score=67.04 Aligned_cols=88 Identities=14% Similarity=0.159 Sum_probs=64.1
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEE-EeCCchhhhhh-hcCCce-eeCHHHHhcCCcEEEEcCCCcccCCHHHHhc
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYI-TEIDPICALQA-CMDGFS-VVKLNEVIRTVDIVVTATGNKNVVTREHMDK 153 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv-~d~dp~r~~~A-~~~G~~-v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~ 153 (542)
-.+++|+|+|.+|..+|..+...|.+|++ +++++.+.... ...|.. ..+..+.+.++|+||.|+.. ..+ .+.++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~-~~~-~~v~~~ 100 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY-DSI-ADIVTQ 100 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG-GGH-HHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh-HHH-HHHHHH
Confidence 36899999999999999999999999999 99998876542 333543 23445567899999999753 233 345555
Q ss_pred cC--CCeEEEeccCC
Q psy4626 154 MK--NGCVVCNMGHS 166 (542)
Q Consensus 154 mk--~GailvnvG~g 166 (542)
++ ++.+++++..+
T Consensus 101 l~~~~~~ivi~~~~g 115 (220)
T 4huj_A 101 VSDWGGQIVVDASNA 115 (220)
T ss_dssp CSCCTTCEEEECCCC
T ss_pred hhccCCCEEEEcCCC
Confidence 42 57788877744
No 283
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=97.23 E-value=0.00098 Score=71.16 Aligned_cols=92 Identities=16% Similarity=0.172 Sum_probs=64.7
Q ss_pred ccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee--eCHHHH---------------hcCCcEEE
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV--VKLNEV---------------IRTVDIVV 137 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v--~~l~e~---------------l~~aDvVi 137 (542)
-.|.++-|+|.|.+|..+|..|...|.+|+++|+|+.+........... ..++++ +++||+||
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 3688999999999999999999999999999999998765432211111 111211 35799999
Q ss_pred EcCCCcccCC--------------HHHHhccCCCeEEEeccCC
Q psy4626 138 TATGNKNVVT--------------REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 138 ~atG~~~lI~--------------~e~l~~mk~GailvnvG~g 166 (542)
.|.+++.-.+ ....+.+++|.++++.+.-
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV 131 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTI 131 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCC
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 9988765211 2345568999999987754
No 284
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=97.22 E-value=0.00049 Score=74.00 Aligned_cols=84 Identities=25% Similarity=0.316 Sum_probs=60.1
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-----------CC-----------cee-eCHHHHhcCCc
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-----------DG-----------FSV-VKLNEVIRTVD 134 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-----------~G-----------~~v-~~l~e~l~~aD 134 (542)
++|+|||+|.+|.++|..+...|.+|+++|+++.+...+.. .| ..+ .++ +.+++||
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~aD 116 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTVD 116 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCCC
Confidence 58999999999999999999999999999999876543321 01 112 234 5678999
Q ss_pred EEEEcCCCcccCC----HHHHhccCCCeEEEe
Q psy4626 135 IVVTATGNKNVVT----REHMDKMKNGCVVCN 162 (542)
Q Consensus 135 vVi~atG~~~lI~----~e~l~~mk~Gailvn 162 (542)
+||+|+....-+. .+.-..+++++++++
T Consensus 117 lVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 117 LVVEAVFEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 9999986421111 223345789998885
No 285
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.19 E-value=0.00052 Score=67.03 Aligned_cols=91 Identities=18% Similarity=0.255 Sum_probs=63.8
Q ss_pred ccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhh--hhcCCceeeC--H-HHHhcCCcEEEEcCCCcccCC
Q psy4626 73 VMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQ--ACMDGFSVVK--L-NEVIRTVDIVVTATGNKNVVT 147 (542)
Q Consensus 73 ~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~--A~~~G~~v~~--l-~e~l~~aDvVi~atG~~~lI~ 147 (542)
..+.|++|+|+|.|.+|...++.|...|++|+|++.+.....+ +...+..... . ++-+.++|+||.+|+.+. +|
T Consensus 27 l~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~-~N 105 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQA-VN 105 (223)
T ss_dssp ECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCTH-HH
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCHH-HH
Confidence 4578999999999999999999999999999999865533221 2222333321 1 345789999999998764 45
Q ss_pred HHHHhccCCCeEEEeccC
Q psy4626 148 REHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 148 ~e~l~~mk~GailvnvG~ 165 (542)
.......+ -++.+|+.-
T Consensus 106 ~~I~~~ak-~gi~VNvvD 122 (223)
T 3dfz_A 106 KFVKQHIK-NDQLVNMAS 122 (223)
T ss_dssp HHHHHHSC-TTCEEEC--
T ss_pred HHHHHHHh-CCCEEEEeC
Confidence 44444455 778888763
No 286
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=97.19 E-value=0.00064 Score=71.67 Aligned_cols=84 Identities=15% Similarity=0.139 Sum_probs=61.9
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCc------------------ee-eCHHHHhcCCcEEEEc
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGF------------------SV-VKLNEVIRTVDIVVTA 139 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~------------------~v-~~l~e~l~~aDvVi~a 139 (542)
+|+|+|.|.+|..+|..|.. |.+|+++|+++.+.......+. .. .++.++++.+|+||.|
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvviia 80 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVIIA 80 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEEe
Confidence 69999999999999999988 9999999999987654433332 22 2456778899999999
Q ss_pred CCCcc----------cCC---HHHHhccCCCeEEEecc
Q psy4626 140 TGNKN----------VVT---REHMDKMKNGCVVCNMG 164 (542)
Q Consensus 140 tG~~~----------lI~---~e~l~~mk~GailvnvG 164 (542)
++++. .+. .+... ++++.+++..+
T Consensus 81 vpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~S 117 (402)
T 1dlj_A 81 TPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKS 117 (402)
T ss_dssp CCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECS
T ss_pred cCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeC
Confidence 87752 121 12334 78899888633
No 287
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.18 E-value=0.00067 Score=70.96 Aligned_cols=218 Identities=17% Similarity=0.152 Sum_probs=113.7
Q ss_pred HHHHHHHhCCCEEEEEeCCc-----hhhhhhhcCCceee-CHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEecc
Q psy4626 91 GCCQSLKGLGCVIYITEIDP-----ICALQACMDGFSVV-KLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMG 164 (542)
Q Consensus 91 ~vA~~l~~~Ga~Viv~d~dp-----~r~~~A~~~G~~v~-~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG 164 (542)
..++.|...|.+|++ +... +...+....|+.++ +.++.+.++|+|+.. +..+ .+.+..+++|..++...
T Consensus 21 ~~v~~L~~~G~~V~v-e~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~~adii~~v---k~p~-~~e~~~l~~~~~l~~~~ 95 (377)
T 2vhw_A 21 AGVAELTRRGHEVLI-QAGAGEGSAITDADFKAAGAQLVGTADQVWADADLLLKV---KEPI-AAEYGRLRHGQILFTFL 95 (377)
T ss_dssp HHHHHHHHTTCEEEE-ETTTTGGGTCCHHHHHHHTCEEESCHHHHHHHCSEEECS---SCCC-GGGGGGCCTTCEEEECC
T ss_pred HHHHHHHhCCCEEEE-eCCCCcCCCCCHHHHHHCCCEEecCHHHHhccCCEEEEe---CCCC-hHHHhhcCCCCEEEEEe
Confidence 345677788999865 3222 11122233477655 467888889987532 2223 36777788887766554
Q ss_pred CC-CcccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCCcccccCCCChhHHHhhHHHHHHHHHHHHhcCCCC--
Q psy4626 165 HS-NTEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLSCSSLPSFVVSITACTQALALIELFNAPSG-- 241 (542)
Q Consensus 165 ~g-~~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLvnl~~~thp~~vmd~sfa~q~la~~~L~~~~~~-- 241 (542)
+. .+...++++.+++++....+ ..+. ..|+++.+. |+--.....+.+.. ..++-....+
T Consensus 96 ~~~~~~~~l~~l~~~gi~~ia~e------~v~~-------~~~~~p~~s----~~ae~ag~~a~~~a-~r~l~~~~~g~~ 157 (377)
T 2vhw_A 96 HLAASRACTDALLDSGTTSIAYE------TVQT-------ADGALPLLA----PMSEVAGRLAAQVG-AYHLMRTQGGRG 157 (377)
T ss_dssp CGGGCHHHHHHHHHHTCEEEEGG------GCCC-------TTSCCTTTH----HHHHHHHHHHHHHH-HHHTSGGGTSCC
T ss_pred cccCCHHHHHHHHHcCCeEEEee------eccc-------cCCCccccC----chHHHHHHHHHHHH-HHHHHHhcCCCc
Confidence 32 23344555554334332211 0010 113332211 11101111122222 1222110001
Q ss_pred CCCCccccCChhhHHHHHHhcCCcccc----ccccccHHHHhhcCCC----CCCCCCCCccc-cCCee-------eeehh
Q psy4626 242 RYKSDVYLLPKKMDEYVASLHLPTFDA----HLTELSDEQAKYMGLN----KAGPFKPSYYS-MDGFS-------VVKLN 305 (542)
Q Consensus 242 ~~~~gv~~lp~~~d~~VA~l~L~~lg~----~i~~lt~~~a~~lg~~----e~~p~~a~ea~-mdG~~-------v~~~~ 305 (542)
.|..++.. +..++.++ .++....+.++.+|+. +.+|.+.-++. +-|.. ..+++
T Consensus 158 ~~~~~~~~-----------l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~ 226 (377)
T 2vhw_A 158 VLMGGVPG-----------VEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELE 226 (377)
T ss_dssp CCTTCBTT-----------BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHH
T ss_pred ccccCCCC-----------CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHH
Confidence 12222211 22333333 8888889999999983 23333321111 11221 12467
Q ss_pred hhcccCcEEEEccCCC-----CccCHhHHhcCCCCcEEEccC
Q psy4626 306 EVIRTVDIVVTATGNK-----NVVTREHMDKMKNGCVVCNMG 342 (542)
Q Consensus 306 ~a~~~~d~~~t~tg~~-----~vi~~~~~~~mk~gail~n~g 342 (542)
++++.+|+||.++|.. .+|+.+.++.||+|++++|+|
T Consensus 227 ~~l~~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 227 GAVKRADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp HHHHHCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred HHHcCCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 8889999999988654 578999999999999999999
No 288
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=97.15 E-value=0.00056 Score=67.39 Aligned_cols=88 Identities=13% Similarity=0.086 Sum_probs=61.0
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcC---Cc----e-eeCHHHHhcCCcEEEEcCCCcccCC--H
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMD---GF----S-VVKLNEVIRTVDIVVTATGNKNVVT--R 148 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~---G~----~-v~~l~e~l~~aDvVi~atG~~~lI~--~ 148 (542)
+|+|+|+|.+|..+|..|...|.+|+++++++.+....... |. . ..+..+.++.+|+||.|+....+-. .
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~~~~v~~ 81 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVK 81 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHHhHHHHHH
Confidence 69999999999999999999999999999988654322111 21 0 1233456788999999987654311 1
Q ss_pred HHHhccCCCeEEEeccCC
Q psy4626 149 EHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 149 e~l~~mk~GailvnvG~g 166 (542)
+....++++.+++++..+
T Consensus 82 ~l~~~l~~~~~vv~~~~g 99 (291)
T 1ks9_A 82 SLASTLPVTTPILLIHNG 99 (291)
T ss_dssp HHHTTSCTTSCEEEECSS
T ss_pred HHHhhCCCCCEEEEecCC
Confidence 223456778888876544
No 289
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.13 E-value=0.0027 Score=63.58 Aligned_cols=105 Identities=16% Similarity=0.267 Sum_probs=71.9
Q ss_pred HHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhh-cC-----CceeeCHHHHhcCC
Q psy4626 61 ESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQAC-MD-----GFSVVKLNEVIRTV 133 (542)
Q Consensus 61 ~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~-~~-----G~~v~~l~e~l~~a 133 (542)
.+++.++.+. +....|++++|+|+|-.+++++..|...|+ +|+++++++.|+.... .. ...+....+.+.++
T Consensus 110 ~Gf~~~L~~~-g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~ 188 (269)
T 3tum_A 110 AGFLGAAHKH-GFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDF 188 (269)
T ss_dssp HHHHHHHHHT-TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTC
T ss_pred HHHHHHHHHh-CCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcc
Confidence 3445555543 456789999999999999999999999997 9999999998764321 11 11222223345789
Q ss_pred cEEEEcCC--C---cc-cCCHHHHhccCCCeEEEeccCC
Q psy4626 134 DIVVTATG--N---KN-VVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 134 DvVi~atG--~---~~-lI~~e~l~~mk~GailvnvG~g 166 (542)
|+||.||. - .. -+....++.++++.++..+--.
T Consensus 189 dliiNaTp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~vY~ 227 (269)
T 3tum_A 189 DLVANASPVGMGTRAELPLSAALLATLQPDTLVADVVTS 227 (269)
T ss_dssp SEEEECSSTTCSTTCCCSSCHHHHHTCCTTSEEEECCCS
T ss_pred cccccCCccccCCCCCCCCChHHHhccCCCcEEEEEccC
Confidence 99999873 1 11 1344556778888877766544
No 290
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.12 E-value=0.00056 Score=72.59 Aligned_cols=89 Identities=15% Similarity=0.244 Sum_probs=65.2
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee-----CH---HHH-hcCCcEEEEcCCCcccC-
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV-----KL---NEV-IRTVDIVVTATGNKNVV- 146 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~-----~l---~e~-l~~aDvVi~atG~~~lI- 146 (542)
+.+|+|+|+|.+|+.+++.|+..|.+|+++|.||.+...+...|+.++ +. .++ +..+|+||.++++...-
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 457999999999999999999999999999999998877777787654 22 222 57899999998754221
Q ss_pred -CHHHHhccCCCeEEEeccC
Q psy4626 147 -TREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 147 -~~e~l~~mk~GailvnvG~ 165 (542)
-....+.+.+...++.-.+
T Consensus 84 ~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 84 QLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp HHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHhCCCCeEEEEEC
Confidence 1234455556655554443
No 291
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=97.10 E-value=0.0027 Score=67.77 Aligned_cols=83 Identities=18% Similarity=0.336 Sum_probs=59.6
Q ss_pred cCccccCcEEEEEcCChhHHHHHHHHHhCCCEEE-EEeC----------Cchhhhhhh-cCC-------ceeeCHHHHh-
Q psy4626 71 TDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIY-ITEI----------DPICALQAC-MDG-------FSVVKLNEVI- 130 (542)
Q Consensus 71 ~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Vi-v~d~----------dp~r~~~A~-~~G-------~~v~~l~e~l- 130 (542)
.+..+.|++|+|.|+|++|+.+|+.|..+|++|+ +.|. |+..+.+.. ..| ...++.++.+
T Consensus 229 ~g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~ 308 (440)
T 3aog_A 229 IGLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWG 308 (440)
T ss_dssp HTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTT
T ss_pred cCCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhc
Confidence 3567899999999999999999999999999988 6776 333322211 111 2344556665
Q ss_pred cCCcEEEEcCCCcccCCHHHHhcc
Q psy4626 131 RTVDIVVTATGNKNVVTREHMDKM 154 (542)
Q Consensus 131 ~~aDvVi~atG~~~lI~~e~l~~m 154 (542)
..|||++.|+. .+.++.+....+
T Consensus 309 ~~~DIlvPcA~-~n~i~~~na~~l 331 (440)
T 3aog_A 309 LPVEFLVPAAL-EKQITEQNAWRI 331 (440)
T ss_dssp CCCSEEEECSS-SSCBCTTTGGGC
T ss_pred CCCcEEEecCC-cCccchhhHHHc
Confidence 47999999863 457776777777
No 292
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=97.08 E-value=0.00098 Score=71.97 Aligned_cols=89 Identities=15% Similarity=0.202 Sum_probs=64.5
Q ss_pred cEEEEEcCChhHHHHHHHHHhC--CCEEEEEeCCchhhhhhhcC-------------------Ccee-eCHHHHhcCCcE
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGL--GCVIYITEIDPICALQACMD-------------------GFSV-VKLNEVIRTVDI 135 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~--Ga~Viv~d~dp~r~~~A~~~-------------------G~~v-~~l~e~l~~aDv 135 (542)
.+|+|||.|.+|..+|..|... |.+|+++|+++.+....... +... .++.++++++|+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 4899999999999999999877 78999999999876543221 1222 245677889999
Q ss_pred EEEcCCCccc--------------CC---HHHHhccCCCeEEEeccCC
Q psy4626 136 VVTATGNKNV--------------VT---REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 136 Vi~atG~~~l--------------I~---~e~l~~mk~GailvnvG~g 166 (542)
||.|.+++.- +. .+..+.+++|.++++.+..
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv 137 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTV 137 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred EEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCC
Confidence 9999876431 11 1234568899999986543
No 293
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.07 E-value=0.00078 Score=64.31 Aligned_cols=65 Identities=15% Similarity=0.118 Sum_probs=51.0
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhh-hcCCceee-----C---HHHH-hcCCcEEEEcCCCc
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQA-CMDGFSVV-----K---LNEV-IRTVDIVVTATGNK 143 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A-~~~G~~v~-----~---l~e~-l~~aDvVi~atG~~ 143 (542)
+|+|+|+|.+|+.+|+.|...|.+|+++|.++.+.... ...|+.++ + +.++ +.++|+||.+++..
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 76 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRD 76 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCc
Confidence 68999999999999999999999999999999876543 33455432 1 2233 57899999998764
No 294
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=97.06 E-value=0.00079 Score=65.75 Aligned_cols=60 Identities=15% Similarity=0.239 Sum_probs=49.8
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCC----CEEEEEeCCchhhhhhhcCCceee-CHHHHhcCCcEEEEcCCC
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLG----CVIYITEIDPICALQACMDGFSVV-KLNEVIRTVDIVVTATGN 142 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~G----a~Viv~d~dp~r~~~A~~~G~~v~-~l~e~l~~aDvVi~atG~ 142 (542)
..+|+|+|+|.+|..++..+...| .+|+++|+++.+ .|..+. +..++++.+|+||.|+..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~~~~~~~~~~~~D~vi~~v~~ 68 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TTLNYMSSNEELARHCDIIVCAVKP 68 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEECSCHHHHHHHCSEEEECSCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEEeCCHHHHHhcCCEEEEEeCH
Confidence 357999999999999999998888 689999988765 455543 567788899999999863
No 295
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=97.04 E-value=0.00086 Score=68.55 Aligned_cols=88 Identities=10% Similarity=0.118 Sum_probs=62.8
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCC-------CEEEEEeCCch-----hhhhhhc--------------CCcee-eCHHHH
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLG-------CVIYITEIDPI-----CALQACM--------------DGFSV-VKLNEV 129 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~G-------a~Viv~d~dp~-----r~~~A~~--------------~G~~v-~~l~e~ 129 (542)
.++|+|+|+|.+|..+|..|...| .+|+++++++. +...... .+... .+++++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 358999999999999999998888 89999999886 4432211 12222 356778
Q ss_pred hcCCcEEEEcCCCcccCCHHHH----hccCCCeEEEeccCC
Q psy4626 130 IRTVDIVVTATGNKNVVTREHM----DKMKNGCVVCNMGHS 166 (542)
Q Consensus 130 l~~aDvVi~atG~~~lI~~e~l----~~mk~GailvnvG~g 166 (542)
++.+|+||.|+... .+ .+.+ ..++++.+++++..+
T Consensus 88 ~~~aD~Vilav~~~-~~-~~v~~~i~~~l~~~~ivv~~~~G 126 (354)
T 1x0v_A 88 AEDADILIFVVPHQ-FI-GKICDQLKGHLKANATGISLIKG 126 (354)
T ss_dssp HTTCSEEEECCCGG-GH-HHHHHHHTTCSCTTCEEEECCCC
T ss_pred HcCCCEEEEeCCHH-HH-HHHHHHHHhhCCCCCEEEEECCc
Confidence 88999999998543 22 2333 346788888887654
No 296
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=97.02 E-value=0.0012 Score=65.07 Aligned_cols=93 Identities=14% Similarity=0.248 Sum_probs=63.5
Q ss_pred cccCcEEEEEcCC-hhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-----eeCHH---H---HhcCCcEEEEcCC
Q psy4626 74 MFGGKQVVLCGYG-EVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-----VVKLN---E---VIRTVDIVVTATG 141 (542)
Q Consensus 74 ~l~GktVvViG~G-~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-----v~~l~---e---~l~~aDvVi~atG 141 (542)
.+.||+++|.|.+ -||+.+|+.|...|++|+++|+++.....+...... +.+.+ + .+...|++|.+.|
T Consensus 8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG 87 (242)
T 4b79_A 8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAG 87 (242)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 3589999999996 599999999999999999999988765433322222 12222 2 2467999999876
Q ss_pred CcccC---C-------------------HHHHhcc-CCCeEEEeccCC
Q psy4626 142 NKNVV---T-------------------REHMDKM-KNGCVVCNMGHS 166 (542)
Q Consensus 142 ~~~lI---~-------------------~e~l~~m-k~GailvnvG~g 166 (542)
...-+ + +..+..| ++++.|||+++.
T Consensus 88 i~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~ 135 (242)
T 4b79_A 88 ISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASM 135 (242)
T ss_dssp CCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCG
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeec
Confidence 22111 1 2344555 357889998864
No 297
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=97.00 E-value=0.00034 Score=72.19 Aligned_cols=86 Identities=10% Similarity=0.115 Sum_probs=62.1
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcC--------------Ccee-eCHHHHhcCCcEEEEcCCCc
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMD--------------GFSV-VKLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~--------------G~~v-~~l~e~l~~aDvVi~atG~~ 143 (542)
+|+|||+|.+|..+|..|...|.+|+++++++.+....... +..+ .++.+++..+|+||.|+...
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~~ 96 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQ 96 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCChH
Confidence 89999999999999999999999999999998765433222 2232 35677788999999998642
Q ss_pred ccCCHHHH--------hccCC-CeEEEeccCC
Q psy4626 144 NVVTREHM--------DKMKN-GCVVCNMGHS 166 (542)
Q Consensus 144 ~lI~~e~l--------~~mk~-GailvnvG~g 166 (542)
.+ .+.+ ..+++ +.+++++..+
T Consensus 97 -~~-~~v~~~~~~gl~~~l~~~~~ivv~~~~g 126 (366)
T 1evy_A 97 -FL-RGFFEKSGGNLIAYAKEKQVPVLVCTKG 126 (366)
T ss_dssp -HH-HHHHHHHCHHHHHHHHHHTCCEEECCCS
T ss_pred -HH-HHHHHHhHHHHHHhcCccCCEEEEECCc
Confidence 22 1222 33566 8888877643
No 298
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.99 E-value=0.0007 Score=65.26 Aligned_cols=85 Identities=18% Similarity=0.339 Sum_probs=59.6
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeC--------HHHH-hcCCcEEEEcCCCcc--
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVK--------LNEV-IRTVDIVVTATGNKN-- 144 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~--------l~e~-l~~aDvVi~atG~~~-- 144 (542)
..++++|+|+|.+|+.+++.|...|. |+++|.+|.+...+. .|+.++. ++++ +.++|.||.+++...
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n 85 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET 85 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHH
Confidence 35689999999999999999999999 999999998766555 6655431 2233 578999999987541
Q ss_pred cCCHHHHhccCCCeEEEe
Q psy4626 145 VVTREHMDKMKNGCVVCN 162 (542)
Q Consensus 145 lI~~e~l~~mk~Gailvn 162 (542)
+.-....+.+.+...++.
T Consensus 86 ~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 86 IHCILGIRKIDESVRIIA 103 (234)
T ss_dssp HHHHHHHHHHCSSSEEEE
T ss_pred HHHHHHHHHHCCCCeEEE
Confidence 222234555666644443
No 299
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=96.98 E-value=0.0063 Score=64.57 Aligned_cols=83 Identities=17% Similarity=0.238 Sum_probs=60.4
Q ss_pred cCccccCcEEEEEcCChhHHHHHHHHHh-CCCEEE-EEeC----------Cchhhhhhhc-C-------CceeeCHHHHh
Q psy4626 71 TDVMFGGKQVVLCGYGEVGKGCCQSLKG-LGCVIY-ITEI----------DPICALQACM-D-------GFSVVKLNEVI 130 (542)
Q Consensus 71 ~~~~l~GktVvViG~G~IG~~vA~~l~~-~Ga~Vi-v~d~----------dp~r~~~A~~-~-------G~~v~~l~e~l 130 (542)
.+..+.|++|+|.|+|++|..+|+.|.. .|++|+ +.|. |+..+.+... . +...++.++.+
T Consensus 203 ~g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil 282 (415)
T 2tmg_A 203 LGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELL 282 (415)
T ss_dssp TTCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHT
T ss_pred cCCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhh
Confidence 4567899999999999999999999998 999988 6666 3433322111 1 12345556665
Q ss_pred -cCCcEEEEcCCCcccCCHHHHhcc
Q psy4626 131 -RTVDIVVTATGNKNVVTREHMDKM 154 (542)
Q Consensus 131 -~~aDvVi~atG~~~lI~~e~l~~m 154 (542)
..+||++.|+ ....++.+....+
T Consensus 283 ~~~~DIliP~A-~~n~i~~~~a~~l 306 (415)
T 2tmg_A 283 ELDVDILVPAA-LEGAIHAGNAERI 306 (415)
T ss_dssp TCSCSEEEECS-STTSBCHHHHTTC
T ss_pred cCCCcEEEecC-CcCccCcccHHHc
Confidence 5899999986 3457887777777
No 300
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.98 E-value=0.002 Score=61.53 Aligned_cols=70 Identities=23% Similarity=0.303 Sum_probs=52.8
Q ss_pred ccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCc-eee--C----HHHHhcCCcEEEEcCCC
Q psy4626 73 VMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGF-SVV--K----LNEVIRTVDIVVTATGN 142 (542)
Q Consensus 73 ~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~-~v~--~----l~e~l~~aDvVi~atG~ 142 (542)
..+.|++|+|+|. |.||+.+++.|...|.+|+++++++.+.......++ .++ + +.+++.++|+||.+.|.
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCC
Confidence 3578999999998 999999999999999999999999877654444455 432 2 34566789999998764
No 301
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.97 E-value=0.0046 Score=61.71 Aligned_cols=81 Identities=19% Similarity=0.148 Sum_probs=56.2
Q ss_pred HHHHHHHhhcCccccCcEEEEEc-CChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-----CCc-----eeeC---HH
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCG-YGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-----DGF-----SVVK---LN 127 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG-~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-----~G~-----~v~~---l~ 127 (542)
+.+..+.+..+..+.|++++|+| .|.+|+.++..|...|++|+++++++.+..+... .+. ++.+ ++
T Consensus 104 g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~ 183 (287)
T 1lu9_A 104 AGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRA 183 (287)
T ss_dssp HHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHH
T ss_pred HHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHH
Confidence 34444443212457899999999 8999999999999999999999998776542211 121 1222 23
Q ss_pred HHhcCCcEEEEcCCC
Q psy4626 128 EVIRTVDIVVTATGN 142 (542)
Q Consensus 128 e~l~~aDvVi~atG~ 142 (542)
++++.+|++|.++|.
T Consensus 184 ~~~~~~DvlVn~ag~ 198 (287)
T 1lu9_A 184 EAVKGAHFVFTAGAI 198 (287)
T ss_dssp HHTTTCSEEEECCCT
T ss_pred HHHHhCCEEEECCCc
Confidence 456778999998863
No 302
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=96.94 E-value=0.005 Score=65.79 Aligned_cols=123 Identities=14% Similarity=0.109 Sum_probs=90.5
Q ss_pred HhHHHHHHHHHHHHH---hhcCccccCcEEEEEcCChhHHHHHHHHHhCCC---EEEEEeCCc----hhh----------
Q psy4626 54 DNLYMCRESIIDSLK---RSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGC---VIYITEIDP----ICA---------- 113 (542)
Q Consensus 54 d~~~g~~~s~~~ai~---r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga---~Viv~d~dp----~r~---------- 113 (542)
|..+||+-.+..++. +.++..+...+++|.|+|.-|.++|..+...|+ +++++|... .|.
T Consensus 193 DD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~ 272 (487)
T 3nv9_A 193 DDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLHNGREDIKKDTRFYR 272 (487)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEECCTTCHHHHHCGGGHH
T ss_pred cccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccccCCcchhhhhcccHH
Confidence 445677655544443 345677888999999999999999999999999 899998752 221
Q ss_pred --hhhhcC-CceeeCHHHHhcCCcEEEEcCCC-cccCCHHHHhccCCCeEEEeccCCCcccChHhhc
Q psy4626 114 --LQACMD-GFSVVKLNEVIRTVDIVVTATGN-KNVVTREHMDKMKNGCVVCNMGHSNTEIDVNSLR 176 (542)
Q Consensus 114 --~~A~~~-G~~v~~l~e~l~~aDvVi~atG~-~~lI~~e~l~~mk~GailvnvG~g~~eid~~aL~ 176 (542)
..|... .....++.++++++|++|-+++. +++++++.++.|.+.-+|.-.+....|+..+...
T Consensus 273 k~~~A~~~n~~~~~~L~eav~~adVlIG~S~~~pg~ft~e~V~~Ma~~PIIFaLSNPtpEi~pe~A~ 339 (487)
T 3nv9_A 273 KWEICETTNPSKFGSIAEACVGADVLISLSTPGPGVVKAEWIKSMGEKPIVFCCANPVPEIYPYEAK 339 (487)
T ss_dssp HHHHHHHSCTTCCCSHHHHHTTCSEEEECCCSSCCCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHH
T ss_pred HHHHHHhcccccCCCHHHHHhcCCEEEEecccCCCCCCHHHHHhhcCCCEEEECCCCCccCCHHHHH
Confidence 112211 11345789999999999998833 7899999999999888888777666677766443
No 303
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=96.94 E-value=0.0018 Score=65.05 Aligned_cols=93 Identities=16% Similarity=0.228 Sum_probs=65.8
Q ss_pred cccCcEEEEEcCC-hhHHHHHHHHHhCCCEEEEEeCCchhhhhhh-cCCce-------eeCHH---HH-------hcCCc
Q psy4626 74 MFGGKQVVLCGYG-EVGKGCCQSLKGLGCVIYITEIDPICALQAC-MDGFS-------VVKLN---EV-------IRTVD 134 (542)
Q Consensus 74 ~l~GktVvViG~G-~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~-~~G~~-------v~~l~---e~-------l~~aD 134 (542)
.+.||+++|.|.+ -||+.+|+.|...|++|+++++++.++.++. +.|.. +.+.+ ++ +...|
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999986 5999999999999999999999987765432 22321 12221 11 24789
Q ss_pred EEEEcCCCcc---cCC---------------------HHHHhccCCCeEEEeccCC
Q psy4626 135 IVVTATGNKN---VVT---------------------REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 135 vVi~atG~~~---lI~---------------------~e~l~~mk~GailvnvG~g 166 (542)
++|.+.|... +.+ +..+..|++++.+||+++.
T Consensus 106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~ 161 (273)
T 4fgs_A 106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGST 161 (273)
T ss_dssp EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeeh
Confidence 9999766211 111 5567788888889988864
No 304
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.94 E-value=0.0011 Score=69.06 Aligned_cols=221 Identities=17% Similarity=0.193 Sum_probs=114.0
Q ss_pred HHHHHHHhCCCEEEEEeCCc-----hhhhhhhcCCceeeCHHHHhcCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccC
Q psy4626 91 GCCQSLKGLGCVIYITEIDP-----ICALQACMDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 91 ~vA~~l~~~Ga~Viv~d~dp-----~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~ 165 (542)
..++.|...|.+|++ +... +...+....|+.+++-++.+ ++|+|+.. .. .+ .+.+..+++|..++...+
T Consensus 21 ~~v~~L~~~g~~v~v-e~~ag~~~~~~d~~y~~aga~i~~~~~~~-~ad~il~v-k~--p~-~~~~~~l~~~~~~~~~~~ 94 (369)
T 2eez_A 21 GGVESLVRRGHTVLV-ERGAGEGSGLSDAEYARAGAELVGREEAW-GAEMVVKV-KE--PL-PEEYGFLREGLILFTYLH 94 (369)
T ss_dssp HHHHHHHHTTCEEEE-ETTTTGGGTCCHHHHHHHTCEEECHHHHT-TSSEEECS-SC--CC-GGGGGGCCTTCEEEECCC
T ss_pred HHHHHHHhCCCEEEE-eCCCCccCCCCHHHHHHCCCEEeccccee-cCCEEEEE-CC--CC-HHHHhhcCCCcEEEEEec
Confidence 345677788999865 3222 11122234477766656678 89998732 22 23 356899999988876554
Q ss_pred CC-cccChHhhcCCCcceeeeccceeeEecCCCCEEEEecCCCcccccCCCChhHHHhhHHHHHHHHHHHHhcCC---CC
Q psy4626 166 SN-TEIDVNSLRTPDLTWEKVRSQVDHVIWPDGKRIVLLAEGRLVNLSCSSLPSFVVSITACTQALALIELFNAP---SG 241 (542)
Q Consensus 166 g~-~eid~~aL~~~~l~v~~~~~~v~~y~~~dg~~I~LLa~GrLvnl~~~thp~~vmd~sfa~q~la~~~L~~~~---~~ 241 (542)
.. +..+++.+.+++++....+ ..++ ..|+++-+. |+-...-..+.+ ...+.+... .+
T Consensus 95 ~~~~~~~~~~l~~~gi~~ia~e------~~~~-------~~~~~~~l~----~~s~~ag~~av~--~a~~~l~~~~~g~~ 155 (369)
T 2eez_A 95 LAADRGLTEAMLRSGVTGIAYE------TVQL-------PDGTLPLLV----PMSEVAGRMAPQ--VGAQFLEKPKGGRG 155 (369)
T ss_dssp GGGCHHHHHHHHHHTCEEEEGG------GCCC-------TTCCCTTTH----HHHHHHHHHHHH--HHHHHTSGGGTSCC
T ss_pred ccCCHHHHHHHHHCCCeEEEee------cccc-------ccCCeeecc----cchHHHHHHHHH--HHHHHHHHhcCCCc
Confidence 32 3445566654444332110 0111 113332211 221111111222 222222211 00
Q ss_pred CCCCccccCChhhHHHHHHhcCCcccc-ccccccHHHHhhcCCC----CCCCCCCCccc-cCCee-------eeehhhhc
Q psy4626 242 RYKSDVYLLPKKMDEYVASLHLPTFDA-HLTELSDEQAKYMGLN----KAGPFKPSYYS-MDGFS-------VVKLNEVI 308 (542)
Q Consensus 242 ~~~~gv~~lp~~~d~~VA~l~L~~lg~-~i~~lt~~~a~~lg~~----e~~p~~a~ea~-mdG~~-------v~~~~~a~ 308 (542)
.+..++..++.. +.-.+|. .++....+.++.+|+. +.+|.+.-++. .-|.. ...+++++
T Consensus 156 ~~~~~~~~l~~~--------~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~ 227 (369)
T 2eez_A 156 VLLGGVPGVAPA--------SVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSV 227 (369)
T ss_dssp CCTTCBTBBCCC--------EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHH
T ss_pred eecCCCCCCCCC--------EEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHH
Confidence 122222111111 1112222 7788888889999983 23343321111 11222 12456888
Q ss_pred ccCcEEEEccCCC-----CccCHhHHhcCCCCcEEEccCCC
Q psy4626 309 RTVDIVVTATGNK-----NVVTREHMDKMKNGCVVCNMGHS 344 (542)
Q Consensus 309 ~~~d~~~t~tg~~-----~vi~~~~~~~mk~gail~n~gh~ 344 (542)
+.+|++|.++|.. .++..+.++.||+|++++|.|..
T Consensus 228 ~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 228 QHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp HHCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC--
T ss_pred hCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecC
Confidence 9999999988754 56899999999999999999954
No 305
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.91 E-value=0.00066 Score=70.81 Aligned_cols=90 Identities=17% Similarity=0.165 Sum_probs=62.9
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCc-ee------eCHHHHhcCCcEEEEcCCCcccC
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGF-SV------VKLNEVIRTVDIVVTATGNKNVV 146 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~-~v------~~l~e~l~~aDvVi~atG~~~lI 146 (542)
.-.+++|+|+|+|.+|+.+++.|... .+|.++++++.++........ .. .+++++++++|+||.|+... .-
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~-~~ 90 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF-LG 90 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHH-HH
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChh-hh
Confidence 34689999999999999999999877 899999999988764333221 11 12456778999999996532 11
Q ss_pred CHHHHhccCCCeEEEeccC
Q psy4626 147 TREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 147 ~~e~l~~mk~GailvnvG~ 165 (542)
..-....++.|..++.++.
T Consensus 91 ~~v~~a~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 91 FKSIKAAIKSKVDMVDVSF 109 (365)
T ss_dssp HHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHHHhCCeEEEccC
Confidence 1112345678888888774
No 306
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.90 E-value=0.0049 Score=65.52 Aligned_cols=83 Identities=18% Similarity=0.337 Sum_probs=60.5
Q ss_pred cCccccCcEEEEEcCChhHHHHHHHHHhCCCEEE-EEeCC----------chhhhhhhc-CC------ceeeCHHHHh-c
Q psy4626 71 TDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIY-ITEID----------PICALQACM-DG------FSVVKLNEVI-R 131 (542)
Q Consensus 71 ~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Vi-v~d~d----------p~r~~~A~~-~G------~~v~~l~e~l-~ 131 (542)
.+..+.|++|+|-|+|++|..+|+.|..+|++|+ +.|.+ +..+.+... .| ...++.++.+ .
T Consensus 215 ~g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~ 294 (424)
T 3k92_A 215 KGIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEK 294 (424)
T ss_dssp TTCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHS
T ss_pred cCCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceec
Confidence 3567999999999999999999999999999975 67766 333222221 22 2344556655 5
Q ss_pred CCcEEEEcCCCcccCCHHHHhcc
Q psy4626 132 TVDIVVTATGNKNVVTREHMDKM 154 (542)
Q Consensus 132 ~aDvVi~atG~~~lI~~e~l~~m 154 (542)
.|||++-|+.. +.|+.+....+
T Consensus 295 ~~DIliPcA~~-n~I~~~~a~~l 316 (424)
T 3k92_A 295 DCDILVPAAIS-NQITAKNAHNI 316 (424)
T ss_dssp CCSEEEECSCS-SCBCTTTGGGC
T ss_pred cccEEeecCcc-cccChhhHhhc
Confidence 89999998743 67887777777
No 307
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=96.90 E-value=0.0013 Score=63.94 Aligned_cols=79 Identities=25% Similarity=0.297 Sum_probs=59.3
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEE-EEEeCCchhhhhhhcCCceeeCHHHHh-cCCcEEEEcCCCcccCCHHHHhccCC
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGCVI-YITEIDPICALQACMDGFSVVKLNEVI-RTVDIVVTATGNKNVVTREHMDKMKN 156 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga~V-iv~d~dp~r~~~A~~~G~~v~~l~e~l-~~aDvVi~atG~~~lI~~e~l~~mk~ 156 (542)
+|+|+|+|.+|+.+++.+...|.++ .++|+++ +.. . .+.++++++ .++|+|++|+++.... ......++.
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-~~~---~---~~~~~~~l~~~~~DvVv~~~~~~~~~-~~~~~~l~~ 73 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-EHE---K---MVRGIDEFLQREMDVAVEAASQQAVK-DYAEKILKA 73 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-CCT---T---EESSHHHHTTSCCSEEEECSCHHHHH-HHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-chh---h---hcCCHHHHhcCCCCEEEECCCHHHHH-HHHHHHHHC
Confidence 6999999999999999998889987 6899875 221 1 345788888 6999999998754222 234566788
Q ss_pred CeEEEeccC
Q psy4626 157 GCVVCNMGH 165 (542)
Q Consensus 157 GailvnvG~ 165 (542)
|..++....
T Consensus 74 G~~vv~~~~ 82 (236)
T 2dc1_A 74 GIDLIVLST 82 (236)
T ss_dssp TCEEEESCG
T ss_pred CCcEEEECc
Confidence 887776554
No 308
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=96.88 E-value=0.0056 Score=60.05 Aligned_cols=41 Identities=20% Similarity=0.240 Sum_probs=36.0
Q ss_pred cccCcEEEEEcCC---hhHHHHHHHHHhCCCEEEEEeCCchhhh
Q psy4626 74 MFGGKQVVLCGYG---EVGKGCCQSLKGLGCVIYITEIDPICAL 114 (542)
Q Consensus 74 ~l~GktVvViG~G---~IG~~vA~~l~~~Ga~Viv~d~dp~r~~ 114 (542)
.+.||+++|.|.+ -||+.+|+.|...|++|+++++++....
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~ 46 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRK 46 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 4789999999974 5999999999999999999999876543
No 309
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.84 E-value=0.0027 Score=64.48 Aligned_cols=92 Identities=15% Similarity=0.244 Sum_probs=61.6
Q ss_pred CccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-------------eCHHHHhcCCcEEEE
Q psy4626 72 DVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-------------VKLNEVIRTVDIVVT 138 (542)
Q Consensus 72 ~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-------------~~l~e~l~~aDvVi~ 138 (542)
+....-++|+|+|+|.+|..+|..|...|.+|+++ +++.+.......|... .+..+.+..+|+||.
T Consensus 14 ~~~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~vil 92 (318)
T 3hwr_A 14 NLYFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSAVQGADLVLF 92 (318)
T ss_dssp ------CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGGGTTCSEEEE
T ss_pred hhhccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHcCCCCEEEE
Confidence 34455779999999999999999999999999999 8886655443334321 111233578999999
Q ss_pred cCCCcccCCHHHHh----ccCCCeEEEeccCC
Q psy4626 139 ATGNKNVVTREHMD----KMKNGCVVCNMGHS 166 (542)
Q Consensus 139 atG~~~lI~~e~l~----~mk~GailvnvG~g 166 (542)
|+....+ .+.++ .++++.+++++.-|
T Consensus 93 avk~~~~--~~~l~~l~~~l~~~~~iv~~~nG 122 (318)
T 3hwr_A 93 CVKSTDT--QSAALAMKPALAKSALVLSLQNG 122 (318)
T ss_dssp CCCGGGH--HHHHHHHTTTSCTTCEEEEECSS
T ss_pred EcccccH--HHHHHHHHHhcCCCCEEEEeCCC
Confidence 9865433 23333 45678888876655
No 310
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=96.83 E-value=0.0013 Score=65.89 Aligned_cols=86 Identities=15% Similarity=0.128 Sum_probs=61.1
Q ss_pred cEEEEEcCChhHHHHHHHHHhC-----C-CEEEEEeCCchhhhhhhc-CCceee--------------CHHHHhcCCcEE
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGL-----G-CVIYITEIDPICALQACM-DGFSVV--------------KLNEVIRTVDIV 136 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~-----G-a~Viv~d~dp~r~~~A~~-~G~~v~--------------~l~e~l~~aDvV 136 (542)
.+|+|+|+|.+|..+|..|... | .+|+++++ +.+...... .|..+. +..+.+..+|+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 4799999999999999999888 9 89999998 655444334 565432 223456789999
Q ss_pred EEcCCCcccCCHHHHh----ccCCCeEEEeccCC
Q psy4626 137 VTATGNKNVVTREHMD----KMKNGCVVCNMGHS 166 (542)
Q Consensus 137 i~atG~~~lI~~e~l~----~mk~GailvnvG~g 166 (542)
|.|+....+ .+.++ .++++..++.+.-|
T Consensus 88 il~vk~~~~--~~v~~~i~~~l~~~~~iv~~~nG 119 (317)
T 2qyt_A 88 LFCTKDYDM--ERGVAEIRPMIGQNTKILPLLNG 119 (317)
T ss_dssp EECCSSSCH--HHHHHHHGGGEEEEEEEEECSCS
T ss_pred EEecCcccH--HHHHHHHHhhcCCCCEEEEccCC
Confidence 999866543 23333 35567788876544
No 311
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.81 E-value=0.0019 Score=61.11 Aligned_cols=90 Identities=10% Similarity=0.079 Sum_probs=60.5
Q ss_pred CcEEEEEcC-ChhHHHHHHHHH-hCCCEEEEEeCCch-hhhhh--hcCCceee-----C---HHHHhcCCcEEEEcCCCc
Q psy4626 77 GKQVVLCGY-GEVGKGCCQSLK-GLGCVIYITEIDPI-CALQA--CMDGFSVV-----K---LNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 77 GktVvViG~-G~IG~~vA~~l~-~~Ga~Viv~d~dp~-r~~~A--~~~G~~v~-----~---l~e~l~~aDvVi~atG~~ 143 (542)
.|+|+|+|. |.||+.+++.|. ..|.+|+++++++. +.... ...+..++ + ++++++++|+||.+.|..
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 367999995 999999999999 89999999999887 54332 22233322 2 245678999999988753
Q ss_pred ccCCHHHHhccC--CCeEEEeccCC
Q psy4626 144 NVVTREHMDKMK--NGCVVCNMGHS 166 (542)
Q Consensus 144 ~lI~~e~l~~mk--~GailvnvG~g 166 (542)
++-....++.|+ ..+.+++++..
T Consensus 85 n~~~~~~~~~~~~~~~~~iv~iSs~ 109 (221)
T 3r6d_A 85 GSDMASIVKALSRXNIRRVIGVSMA 109 (221)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred ChhHHHHHHHHHhcCCCeEEEEeec
Confidence 221234455553 22467766653
No 312
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=96.81 E-value=0.00099 Score=69.12 Aligned_cols=87 Identities=9% Similarity=0.101 Sum_probs=61.9
Q ss_pred cEEEEEcCChhHHHHHHHHHhCC-------CEEEEEeCCch-----hhhhhhc--------------CCcee-eCHHHHh
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLG-------CVIYITEIDPI-----CALQACM--------------DGFSV-VKLNEVI 130 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~G-------a~Viv~d~dp~-----r~~~A~~--------------~G~~v-~~l~e~l 130 (542)
++|+|+|+|.+|..+|..|...| .+|+++++++. +...... .+..+ .++.+++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998888 89999999886 4432211 12232 3466778
Q ss_pred cCCcEEEEcCCCcccCCHHHH----h----ccCCCeEEEeccCC
Q psy4626 131 RTVDIVVTATGNKNVVTREHM----D----KMKNGCVVCNMGHS 166 (542)
Q Consensus 131 ~~aDvVi~atG~~~lI~~e~l----~----~mk~GailvnvG~g 166 (542)
+.+|+||.|+... .+ .+.+ . .++++.+++++..+
T Consensus 102 ~~aDvVilav~~~-~~-~~vl~~i~~~~~~~l~~~~ivvs~~~G 143 (375)
T 1yj8_A 102 NDADLLIFIVPCQ-YL-ESVLASIKESESIKIASHAKAISLTKG 143 (375)
T ss_dssp TTCSEEEECCCHH-HH-HHHHHHHTC---CCCCTTCEEEECCCS
T ss_pred cCCCEEEEcCCHH-HH-HHHHHHHhhhhhccCCCCCEEEEeCCc
Confidence 8999999998643 22 2333 2 46678888877644
No 313
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.80 E-value=0.0055 Score=65.54 Aligned_cols=106 Identities=18% Similarity=0.174 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEe-CC-----c-----hhhh---h-------
Q psy4626 57 YMCRESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITE-ID-----P-----ICAL---Q------- 115 (542)
Q Consensus 57 ~g~~~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d-~d-----p-----~r~~---~------- 115 (542)
||+-..+-+++.+ .+..+.|++|+|-|+|++|..+|+.|...|++|++++ .+ | .... +
T Consensus 216 ~Gv~~~~~~~~~~-~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g 294 (450)
T 4fcc_A 216 YGLVYFTEAMLKR-HGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDG 294 (450)
T ss_dssp HHHHHHHHHHHHH-TTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTC
T ss_pred eeHHHHHHHHHHH-cCCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCC
Confidence 3444333333333 3567899999999999999999999999999998764 11 1 1111 0
Q ss_pred -----hhcCCceeeCHHHHh-cCCcEEEEcCCCcccCCHHHHhccCC-CeE-EEecc
Q psy4626 116 -----ACMDGFSVVKLNEVI-RTVDIVVTATGNKNVVTREHMDKMKN-GCV-VCNMG 164 (542)
Q Consensus 116 -----A~~~G~~v~~l~e~l-~~aDvVi~atG~~~lI~~e~l~~mk~-Gai-lvnvG 164 (542)
+...|...++.++.+ ..|||++-|. ..+.|+.+....++. |+. +++.+
T Consensus 295 ~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcA-l~~~I~~~~a~~L~a~g~k~IaEgA 350 (450)
T 4fcc_A 295 RVADYAKEFGLVYLEGQQPWSVPVDIALPCA-TQNELDVDAAHQLIANGVKAVAEGA 350 (450)
T ss_dssp CHHHHHHHHTCEEEETCCGGGSCCSEEEECS-CTTCBCHHHHHHHHHTTCCEEECCS
T ss_pred ccccccccCCcEEecCcccccCCccEEeecc-ccccccHHHHHHHHhcCceEEecCC
Confidence 111234444444544 5799999975 335788888888864 444 44433
No 314
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=96.80 E-value=0.0014 Score=74.30 Aligned_cols=87 Identities=22% Similarity=0.265 Sum_probs=62.2
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhh-----------hcCCc-------------e-eeCHHHHhc
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQA-----------CMDGF-------------S-VVKLNEVIR 131 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A-----------~~~G~-------------~-v~~l~e~l~ 131 (542)
=++|+|||.|.+|.++|..+...|.+|+++|+++.+...+ ...|. . ..++ +.++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 392 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFG 392 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGG
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHC
Confidence 3579999999999999999999999999999998765442 12231 1 1234 5678
Q ss_pred CCcEEEEcCCCcccCC----HHHHhccCCCeEEE-ecc
Q psy4626 132 TVDIVVTATGNKNVVT----REHMDKMKNGCVVC-NMG 164 (542)
Q Consensus 132 ~aDvVi~atG~~~lI~----~e~l~~mk~Gailv-nvG 164 (542)
+||+||+|.....-+. .+..+.++++++++ |++
T Consensus 393 ~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntS 430 (715)
T 1wdk_A 393 NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTS 430 (715)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCS
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCC
Confidence 9999999975332111 23345678999887 444
No 315
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.76 E-value=0.0034 Score=66.77 Aligned_cols=95 Identities=22% Similarity=0.327 Sum_probs=57.4
Q ss_pred cCccccCcEEEEEcCChhHHHHHHHHHhCCCEEE-EEeCCc---------------hhhhhhhc-CC-------ceeeCH
Q psy4626 71 TDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIY-ITEIDP---------------ICALQACM-DG-------FSVVKL 126 (542)
Q Consensus 71 ~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Vi-v~d~dp---------------~r~~~A~~-~G-------~~v~~l 126 (542)
.+..+.|++|+|.|+|++|+.+|+.|..+|++|+ +.|.++ ..+.+... .| ...++.
T Consensus 206 ~g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~ 285 (421)
T 2yfq_A 206 FGIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITD 285 (421)
T ss_dssp TTCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC------------
T ss_pred cCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCc
Confidence 4567899999999999999999999999999988 678773 11111111 11 122333
Q ss_pred HHHh-cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCCC
Q psy4626 127 NEVI-RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 127 ~e~l-~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g~ 167 (542)
++.+ ..|||++.|+ ..+.|+.+....+ ...+++..+-++
T Consensus 286 ~~~~~~~~DIliP~A-~~n~i~~~~A~~l-~ak~VvEgAN~P 325 (421)
T 2yfq_A 286 EEFWTKEYDIIVPAA-LENVITGERAKTI-NAKLVCEAANGP 325 (421)
T ss_dssp ---------CEEECS-CSSCSCHHHHTTC-CCSEEECCSSSC
T ss_pred cchhcCCccEEEEcC-CcCcCCcccHHHc-CCeEEEeCCccc
Confidence 4444 4799999986 4568888877777 334444444333
No 316
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.73 E-value=0.0047 Score=58.02 Aligned_cols=64 Identities=19% Similarity=0.202 Sum_probs=50.3
Q ss_pred EEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee--CHH----HHhcCCcEEEEcCCC
Q psy4626 79 QVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV--KLN----EVIRTVDIVVTATGN 142 (542)
Q Consensus 79 tVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~--~l~----e~l~~aDvVi~atG~ 142 (542)
+|+|+|. |.||+.+++.|...|.+|+++++++.+.......+..++ ++. +++.++|+||.+.|.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 6999998 999999999999999999999999876654333454432 221 567899999998875
No 317
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=96.71 E-value=0.0021 Score=72.83 Aligned_cols=86 Identities=20% Similarity=0.285 Sum_probs=60.6
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh-----------cCCc-------------e-eeCHHHHhcC
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQAC-----------MDGF-------------S-VVKLNEVIRT 132 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~-----------~~G~-------------~-v~~l~e~l~~ 132 (542)
++|+|||.|.+|.++|..+...|.+|+++|+++.+...+. ..|. . ..++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 5799999999999999999999999999999987654321 1221 1 1234 56789
Q ss_pred CcEEEEcCCCcccCC----HHHHhccCCCeEEE-ecc
Q psy4626 133 VDIVVTATGNKNVVT----REHMDKMKNGCVVC-NMG 164 (542)
Q Consensus 133 aDvVi~atG~~~lI~----~e~l~~mk~Gailv-nvG 164 (542)
||+||+|.....-+. .+..+.++++++++ |++
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntS 428 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTS 428 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCC
Confidence 999999875432111 23345678999886 444
No 318
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.70 E-value=0.0078 Score=63.93 Aligned_cols=91 Identities=20% Similarity=0.327 Sum_probs=63.4
Q ss_pred cCccccCcEEEEEcCChhHHHHHHHHHhCCCEEE-EEeC----------Cchhhhhhhc-CC----ceeeCHHHHh-cCC
Q psy4626 71 TDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIY-ITEI----------DPICALQACM-DG----FSVVKLNEVI-RTV 133 (542)
Q Consensus 71 ~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Vi-v~d~----------dp~r~~~A~~-~G----~~v~~l~e~l-~~a 133 (542)
.+..+.|++|+|.|+|.+|+.+|+.|...|++|+ +.|. |+..+.+... .| | ..+.++++ ..|
T Consensus 212 ~g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~-~~~~~e~~~~~~ 290 (419)
T 3aoe_E 212 RGLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRL-DLAPEEVFGLEA 290 (419)
T ss_dssp HTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCC-CBCTTTGGGSSC
T ss_pred cCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCccee-eccchhhhccCc
Confidence 3567899999999999999999999999999998 7887 4443332211 11 2 22334444 479
Q ss_pred cEEEEcCCCcccCCHHHHhccCCCeEEEecc
Q psy4626 134 DIVVTATGNKNVVTREHMDKMKNGCVVCNMG 164 (542)
Q Consensus 134 DvVi~atG~~~lI~~e~l~~mk~GailvnvG 164 (542)
||++-|+ ..+.++.+....++- .+|+..+
T Consensus 291 DVliP~A-~~n~i~~~~A~~l~a-k~V~EgA 319 (419)
T 3aoe_E 291 EVLVLAA-REGALDGDRARQVQA-QAVVEVA 319 (419)
T ss_dssp SEEEECS-CTTCBCHHHHTTCCC-SEEEECS
T ss_pred eEEEecc-cccccccchHhhCCc-eEEEECC
Confidence 9999986 456888777777733 2444444
No 319
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.65 E-value=0.0035 Score=62.77 Aligned_cols=88 Identities=18% Similarity=0.213 Sum_probs=60.7
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhh-hhcCCceeeCHHHHhcCCcEEEEcCCCccc--------
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQ-ACMDGFSVVKLNEVIRTVDIVVTATGNKNV-------- 145 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~-A~~~G~~v~~l~e~l~~aDvVi~atG~~~l-------- 145 (542)
.+++++|+|+|..|+.++..|...|+ +|+++++++.++.. +...+....+..+ +..+|+||+||.....
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~-~~~~DivInaTp~gm~~~~~~~~~ 196 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE-NQQADILVNVTSIGMKGGKEEMDL 196 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT-TCCCSEEEECSSTTCTTSTTTTSC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh-cccCCEEEECCCCCccCccccCCC
Confidence 67899999999999999999999998 89999999877543 3333433321111 4689999998853210
Q ss_pred -CCHHHHhccCCCeEEEeccCCC
Q psy4626 146 -VTREHMDKMKNGCVVCNMGHSN 167 (542)
Q Consensus 146 -I~~e~l~~mk~GailvnvG~g~ 167 (542)
+. .+.++++.+++++...+
T Consensus 197 ~~~---~~~l~~~~~v~DlvY~P 216 (271)
T 1npy_A 197 AFP---KAFIDNASVAFDVVAMP 216 (271)
T ss_dssp SSC---HHHHHHCSEEEECCCSS
T ss_pred CCC---HHHcCCCCEEEEeecCC
Confidence 11 22345677777766543
No 320
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.64 E-value=0.0021 Score=63.32 Aligned_cols=71 Identities=21% Similarity=0.323 Sum_probs=52.1
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCc-------------------hhhhhhh------cCCcee----
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDP-------------------ICALQAC------MDGFSV---- 123 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp-------------------~r~~~A~------~~G~~v---- 123 (542)
.+.+++|+|+|+|.+|..+|..|...|+ +++++|.|. .|...+. .....+
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 107 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 107 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence 3568899999999999999999999998 999999987 4433221 112221
Q ss_pred --e---CHHHHhcCCcEEEEcCCCcc
Q psy4626 124 --V---KLNEVIRTVDIVVTATGNKN 144 (542)
Q Consensus 124 --~---~l~e~l~~aDvVi~atG~~~ 144 (542)
. ++++.+.++|+||+|+++..
T Consensus 108 ~~~~~~~~~~~~~~~DvVi~~~d~~~ 133 (249)
T 1jw9_B 108 ALLDDAELAALIAEHDLVLDCTDNVA 133 (249)
T ss_dssp SCCCHHHHHHHHHTSSEEEECCSSHH
T ss_pred ccCCHhHHHHHHhCCCEEEEeCCCHH
Confidence 1 13456789999999987643
No 321
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.63 E-value=0.0058 Score=62.77 Aligned_cols=67 Identities=13% Similarity=0.091 Sum_probs=51.1
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhh-hh-------cCC----cee-eCHHHHhcCCcEEEEcCCC
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQ-AC-------MDG----FSV-VKLNEVIRTVDIVVTATGN 142 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~-A~-------~~G----~~v-~~l~e~l~~aDvVi~atG~ 142 (542)
..+|+|+|+|.+|..+|..|...|. +|..+|+++.++.. +. ..+ ... .+++++++++|+||.+.|.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~ 88 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL 88 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence 4589999999999999999998887 99999999865543 11 011 112 4667789999999998764
Q ss_pred c
Q psy4626 143 K 143 (542)
Q Consensus 143 ~ 143 (542)
+
T Consensus 89 p 89 (331)
T 1pzg_A 89 T 89 (331)
T ss_dssp S
T ss_pred C
Confidence 3
No 322
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=96.62 E-value=0.0076 Score=59.74 Aligned_cols=68 Identities=19% Similarity=0.235 Sum_probs=50.5
Q ss_pred cccCcEEEEEcCC-hhHHHHHHHHHhCCCEEEEEeCCchhhhhh----hcCCcee-------eCHH---H-------Hhc
Q psy4626 74 MFGGKQVVLCGYG-EVGKGCCQSLKGLGCVIYITEIDPICALQA----CMDGFSV-------VKLN---E-------VIR 131 (542)
Q Consensus 74 ~l~GktVvViG~G-~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A----~~~G~~v-------~~l~---e-------~l~ 131 (542)
.+.||+++|.|.+ -||+.+|+.|...|++|+++|+++.++.+. ...|.++ .+.+ + .+.
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5789999999986 599999999999999999999998765432 1233221 1221 1 135
Q ss_pred CCcEEEEcCC
Q psy4626 132 TVDIVVTATG 141 (542)
Q Consensus 132 ~aDvVi~atG 141 (542)
..|++|.+.|
T Consensus 84 ~iDiLVNNAG 93 (254)
T 4fn4_A 84 RIDVLCNNAG 93 (254)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 7999999876
No 323
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.61 E-value=0.0024 Score=61.34 Aligned_cols=91 Identities=13% Similarity=0.126 Sum_probs=61.9
Q ss_pred cCcEEEEEc-CChhHHHHHHHHHhCC-CEEEEEeCCchhhhhhhcCCceee-----C---HHHHhcCCcEEEEcCCCccc
Q psy4626 76 GGKQVVLCG-YGEVGKGCCQSLKGLG-CVIYITEIDPICALQACMDGFSVV-----K---LNEVIRTVDIVVTATGNKNV 145 (542)
Q Consensus 76 ~GktVvViG-~G~IG~~vA~~l~~~G-a~Viv~d~dp~r~~~A~~~G~~v~-----~---l~e~l~~aDvVi~atG~~~l 145 (542)
..++|+|+| .|.||+.+++.|...| .+|+++++++.+.......++.++ + ++++++++|+||.+.|....
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~ 101 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDL 101 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTH
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCch
Confidence 467999999 5999999999999999 899999998876543223343322 2 24567899999987764322
Q ss_pred C--CHHHHhccC--CCeEEEeccCC
Q psy4626 146 V--TREHMDKMK--NGCVVCNMGHS 166 (542)
Q Consensus 146 I--~~e~l~~mk--~GailvnvG~g 166 (542)
. ....++.|+ ..+.+|+++..
T Consensus 102 ~~~~~~~~~~~~~~~~~~iV~iSS~ 126 (236)
T 3qvo_A 102 DIQANSVIAAMKACDVKRLIFVLSL 126 (236)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred hHHHHHHHHHHHHcCCCEEEEEecc
Confidence 1 123455553 23467777763
No 324
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=96.61 E-value=0.00071 Score=67.27 Aligned_cols=85 Identities=14% Similarity=0.128 Sum_probs=56.7
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEE-EEEeCCchhhhhhh-cCCceeeCHHHHhcCCcEEEEcCCCcccCCHHHHhcc-C
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGCVI-YITEIDPICALQAC-MDGFSVVKLNEVIRTVDIVVTATGNKNVVTREHMDKM-K 155 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga~V-iv~d~dp~r~~~A~-~~G~~v~~l~e~l~~aDvVi~atG~~~lI~~e~l~~m-k 155 (542)
+|+|||+|.+|..+++.+... .+| .++|+++.+..... ..|....+++++++.+|+||.|+.... + .+.+..+ +
T Consensus 4 ~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~DvVilav~~~~-~-~~v~~~l~~ 80 (276)
T 2i76_A 4 VLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRY-I-KTVANHLNL 80 (276)
T ss_dssp CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTTT-H-HHHHTTTCC
T ss_pred eEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCCccCCHHHHHhcCCEEEEeCChHH-H-HHHHHHhcc
Confidence 699999999999999998776 888 59999987765432 334423355667788999999985533 3 4566666 5
Q ss_pred CCeEEEeccCC
Q psy4626 156 NGCVVCNMGHS 166 (542)
Q Consensus 156 ~GailvnvG~g 166 (542)
++.++++++.+
T Consensus 81 ~~~ivi~~s~~ 91 (276)
T 2i76_A 81 GDAVLVHCSGF 91 (276)
T ss_dssp SSCCEEECCSS
T ss_pred CCCEEEECCCC
Confidence 78888887743
No 325
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.60 E-value=0.0056 Score=56.39 Aligned_cols=66 Identities=17% Similarity=0.183 Sum_probs=49.5
Q ss_pred CcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee-----C---HHHHhcCCcEEEEcCCC
Q psy4626 77 GKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV-----K---LNEVIRTVDIVVTATGN 142 (542)
Q Consensus 77 GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~-----~---l~e~l~~aDvVi~atG~ 142 (542)
+++|+|+|. |.||+.+++.|...|.+|+++++++.+.......++.+. + +.++++++|+||.+.|.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT 77 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence 479999998 999999999999999999999998865432212233321 2 23556889999998764
No 326
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.60 E-value=0.0028 Score=65.45 Aligned_cols=83 Identities=22% Similarity=0.244 Sum_probs=61.2
Q ss_pred cEEEEEcCChhHHHHHHHHHhC-CCEEE-EEeCCchhhhhhhcCCce-eeCHHHHhc--CCcEEEEcCCCcccCCHHHHh
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGL-GCVIY-ITEIDPICALQACMDGFS-VVKLNEVIR--TVDIVVTATGNKNVVTREHMD 152 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~-Ga~Vi-v~d~dp~r~~~A~~~G~~-v~~l~e~l~--~aDvVi~atG~~~lI~~e~l~ 152 (542)
-+|+|||+|.+|...+..++.. +++|+ ++|+++.++..+...|.. +.++++++. +.|+|+.||.+..-. .....
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~-~~~~~ 84 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHK-ELAIS 84 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHH-HHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHH-HHHHH
Confidence 4799999999999999998877 67765 679999887666666765 356888885 799999998653222 23455
Q ss_pred ccCCCeEEE
Q psy4626 153 KMKNGCVVC 161 (542)
Q Consensus 153 ~mk~Gailv 161 (542)
.++.|.-++
T Consensus 85 al~aGkhVl 93 (359)
T 3e18_A 85 ALEAGKHVV 93 (359)
T ss_dssp HHHTTCEEE
T ss_pred HHHCCCCEE
Confidence 666676444
No 327
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.57 E-value=0.0073 Score=61.19 Aligned_cols=87 Identities=11% Similarity=0.082 Sum_probs=59.3
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce---------------e-eCHHHHhcCCcEEEEcCC
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS---------------V-VKLNEVIRTVDIVVTATG 141 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~---------------v-~~l~e~l~~aDvVi~atG 141 (542)
.+|+|+|+|.+|..+|..|...|.+|+++++++... ....|.. + .+.+++.+.+|+||.|+-
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~--i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK 80 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDYET--VKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIK 80 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTHHH--HHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChHHH--HHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecC
Confidence 479999999999999999999999999999887422 1122221 1 233444458999999986
Q ss_pred CcccCC--HHHHhccCCCeEEEeccCC
Q psy4626 142 NKNVVT--REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 142 ~~~lI~--~e~l~~mk~GailvnvG~g 166 (542)
...+.. .+.-..++++..++.+.-|
T Consensus 81 ~~~~~~~l~~l~~~l~~~t~Iv~~~nG 107 (320)
T 3i83_A 81 VVEGADRVGLLRDAVAPDTGIVLISNG 107 (320)
T ss_dssp CCTTCCHHHHHTTSCCTTCEEEEECSS
T ss_pred CCChHHHHHHHHhhcCCCCEEEEeCCC
Confidence 544332 1222345677877766544
No 328
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=96.56 E-value=0.0052 Score=62.14 Aligned_cols=66 Identities=15% Similarity=0.209 Sum_probs=49.7
Q ss_pred cEEEEEcCChhHHHHHHHHHhCC--CEEEEEeCCchhhhhhh-cC---------Ccee--eCHHHHhcCCcEEEEcCCCc
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLG--CVIYITEIDPICALQAC-MD---------GFSV--VKLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~G--a~Viv~d~dp~r~~~A~-~~---------G~~v--~~l~e~l~~aDvVi~atG~~ 143 (542)
++|+|+|+|.+|..+|..|...| .+|+++|+++.++.... .. ...+ .+. +.++++|+||.+++.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 47999999999999999998888 59999999986653221 11 1222 344 6788999999998864
Q ss_pred c
Q psy4626 144 N 144 (542)
Q Consensus 144 ~ 144 (542)
.
T Consensus 81 ~ 81 (309)
T 1hyh_A 81 K 81 (309)
T ss_dssp G
T ss_pred c
Confidence 4
No 329
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=96.53 E-value=0.0093 Score=63.39 Aligned_cols=83 Identities=24% Similarity=0.305 Sum_probs=58.3
Q ss_pred CccccCcEEEEEcCChhHHHHHHHHHhCCCEEE-EEeC----------Cchhhhhhhc-CCc------------eee-CH
Q psy4626 72 DVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIY-ITEI----------DPICALQACM-DGF------------SVV-KL 126 (542)
Q Consensus 72 ~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Vi-v~d~----------dp~r~~~A~~-~G~------------~v~-~l 126 (542)
+..+.|++|+|.|+|++|..+++.|..+|++|+ +.|. |+..+.+... .|. ..+ +.
T Consensus 205 g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~ 284 (421)
T 1v9l_A 205 WGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNP 284 (421)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSST
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCc
Confidence 457899999999999999999999999999988 6676 3433322211 121 233 44
Q ss_pred HHHh-cCCcEEEEcCCCcccCCHHHHhccC
Q psy4626 127 NEVI-RTVDIVVTATGNKNVVTREHMDKMK 155 (542)
Q Consensus 127 ~e~l-~~aDvVi~atG~~~lI~~e~l~~mk 155 (542)
++.+ ..|||++-|. ....|+.+....++
T Consensus 285 ~~~~~~~~Dil~P~A-~~~~I~~~~a~~l~ 313 (421)
T 1v9l_A 285 DAIFKLDVDIFVPAA-IENVIRGDNAGLVK 313 (421)
T ss_dssp TGGGGCCCSEEEECS-CSSCBCTTTTTTCC
T ss_pred hhhhcCCccEEEecC-cCCccchhhHHHcC
Confidence 5555 5799999976 44577766666663
No 330
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.53 E-value=0.012 Score=54.95 Aligned_cols=63 Identities=16% Similarity=0.193 Sum_probs=49.2
Q ss_pred EEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee--CH----HHHhcCCcEEEEcCCC
Q psy4626 79 QVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV--KL----NEVIRTVDIVVTATGN 142 (542)
Q Consensus 79 tVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~--~l----~e~l~~aDvVi~atG~ 142 (542)
+|+|+|. |.||+.+++.|...|.+|+++++++.+..... .+..++ ++ .+++.++|+||.+.|.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 6999995 99999999999999999999999987654322 444432 22 1567899999998775
No 331
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.52 E-value=0.003 Score=67.79 Aligned_cols=90 Identities=14% Similarity=0.277 Sum_probs=64.1
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh--cCCceee--CH-HHHhcCCcEEEEcCCCcccCCH
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQAC--MDGFSVV--KL-NEVIRTVDIVVTATGNKNVVTR 148 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~--~~G~~v~--~l-~e~l~~aDvVi~atG~~~lI~~ 148 (542)
.+.|++|+|+|.|.+|...++.|...|++|+|++.+........ ..+..+. .. ++.+.++|+||.+||.+. +|.
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at~~~~-~n~ 87 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDDT-VNQ 87 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCHH-HHH
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcCCCHH-HHH
Confidence 46899999999999999999999999999999986543322221 1233332 11 234678999999998764 344
Q ss_pred HHHhccCCCeEEEecc
Q psy4626 149 EHMDKMKNGCVVCNMG 164 (542)
Q Consensus 149 e~l~~mk~GailvnvG 164 (542)
......+.-++.+|+.
T Consensus 88 ~i~~~a~~~~i~vn~~ 103 (457)
T 1pjq_A 88 RVSDAAESRRIFCNVV 103 (457)
T ss_dssp HHHHHHHHTTCEEEET
T ss_pred HHHHHHHHcCCEEEEC
Confidence 5566666667777765
No 332
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=96.52 E-value=0.0041 Score=63.11 Aligned_cols=83 Identities=19% Similarity=0.226 Sum_probs=60.3
Q ss_pred cEEEEEcCChhHHHHHHHHHhC-CCEEE-EEeCCchhhhh-hhcCCceeeCHHHHhc--CCcEEEEcCCCcccCCHHHHh
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGL-GCVIY-ITEIDPICALQ-ACMDGFSVVKLNEVIR--TVDIVVTATGNKNVVTREHMD 152 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~-Ga~Vi-v~d~dp~r~~~-A~~~G~~v~~l~e~l~--~aDvVi~atG~~~lI~~e~l~ 152 (542)
.+|+|||+|.+|...+..++.. +++++ ++|+++.++.. +...|..+.++++++. ++|+|+.|+.+..-. .....
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~-~~~~~ 82 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCEVRTIDAIEAAADIDAVVICTPTDTHA-DLIER 82 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCEECCHHHHHHCTTCCEEEECSCGGGHH-HHHHH
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCCcCCHHHHhcCCCCCEEEEeCCchhHH-HHHHH
Confidence 3799999999999999999876 77776 68999987653 3445666667888885 899999998543222 23445
Q ss_pred ccCCCeEEE
Q psy4626 153 KMKNGCVVC 161 (542)
Q Consensus 153 ~mk~Gailv 161 (542)
.++.|.-++
T Consensus 83 al~~gk~v~ 91 (331)
T 4hkt_A 83 FARAGKAIF 91 (331)
T ss_dssp HHHTTCEEE
T ss_pred HHHcCCcEE
Confidence 566665444
No 333
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.50 E-value=0.0075 Score=61.85 Aligned_cols=65 Identities=17% Similarity=0.216 Sum_probs=49.7
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhh-c----------C-Ccee-eCHHHHhcCCcEEEEcCCCc
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQAC-M----------D-GFSV-VKLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~-~----------~-G~~v-~~l~e~l~~aDvVi~atG~~ 143 (542)
++|+|+|+|.+|..+|..+...|. +|..+|+++.++.... . . -... .++ +++++||+||.+.|.+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg~p 93 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAGVP 93 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 689999999999999999999998 9999999986654211 0 0 1122 344 6789999999998654
No 334
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.49 E-value=0.0039 Score=67.14 Aligned_cols=91 Identities=16% Similarity=0.142 Sum_probs=60.4
Q ss_pred ccccCcEEEEEcCChhHHHHHHHHHhC-CCEEEEEeCCchhhhhhh-cCCcee--e------CHHHHhcCCcEEEEcCCC
Q psy4626 73 VMFGGKQVVLCGYGEVGKGCCQSLKGL-GCVIYITEIDPICALQAC-MDGFSV--V------KLNEVIRTVDIVVTATGN 142 (542)
Q Consensus 73 ~~l~GktVvViG~G~IG~~vA~~l~~~-Ga~Viv~d~dp~r~~~A~-~~G~~v--~------~l~e~l~~aDvVi~atG~ 142 (542)
..+.+++|+|+|+|.+|+.++..|... |.+|+++++++.++.... ..+... . ++.+++.++|+||.|++.
T Consensus 19 ~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~ 98 (467)
T 2axq_A 19 GRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPY 98 (467)
T ss_dssp ----CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred cCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence 456789999999999999999999987 679999999987754322 223321 1 234567899999999875
Q ss_pred cccCCHH-HHhccCCCeEEEeccC
Q psy4626 143 KNVVTRE-HMDKMKNGCVVCNMGH 165 (542)
Q Consensus 143 ~~lI~~e-~l~~mk~GailvnvG~ 165 (542)
. .... ....++.|..++.+..
T Consensus 99 ~--~~~~v~~a~l~~g~~vvd~~~ 120 (467)
T 2axq_A 99 T--FHPNVVKSAIRTKTDVVTSSY 120 (467)
T ss_dssp G--GHHHHHHHHHHHTCEEEECSC
T ss_pred h--hhHHHHHHHHhcCCEEEEeec
Confidence 3 1111 1223456777766543
No 335
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=96.48 E-value=0.0033 Score=64.20 Aligned_cols=85 Identities=15% Similarity=0.154 Sum_probs=60.1
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee--------------eCHHHHhcCCcEEEEcCCCc
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV--------------VKLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v--------------~~l~e~l~~aDvVi~atG~~ 143 (542)
.+|+|+|+|.+|..+|..|...|.+|++++++ .+.......|... .++++ +..+|+||.|+.+.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~~ 81 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKAP 81 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCch
Confidence 57999999999999999999999999999975 3333333445432 13444 58899999998653
Q ss_pred ccCCHHHHh----ccCCCeEEEeccCC
Q psy4626 144 NVVTREHMD----KMKNGCVVCNMGHS 166 (542)
Q Consensus 144 ~lI~~e~l~----~mk~GailvnvG~g 166 (542)
.+ .+.++ .++++..++.+.-|
T Consensus 82 ~~--~~~~~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 82 AL--ESVAAGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp HH--HHHHGGGSSSCCTTCEEEECCSS
T ss_pred hH--HHHHHHHHhhCCCCCEEEEECCC
Confidence 32 23444 34578888876554
No 336
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=96.47 E-value=0.0083 Score=59.49 Aligned_cols=93 Identities=19% Similarity=0.348 Sum_probs=63.8
Q ss_pred cccCcEEEEEcCC-hhHHHHHHHHHhCCCEEEEEeCCchhhhhh----hcCCcee-------eCHH---H----H---hc
Q psy4626 74 MFGGKQVVLCGYG-EVGKGCCQSLKGLGCVIYITEIDPICALQA----CMDGFSV-------VKLN---E----V---IR 131 (542)
Q Consensus 74 ~l~GktVvViG~G-~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A----~~~G~~v-------~~l~---e----~---l~ 131 (542)
.+.||+++|.|.+ -||+.+|+.|...|++|+++++++.++.+. ...|..+ .+.+ + + +.
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 5789999999996 599999999999999999999998765432 2233221 1221 1 1 24
Q ss_pred CCcEEEEcCCCc---ccCC---------------------HHHHhcc---CCCeEEEeccCC
Q psy4626 132 TVDIVVTATGNK---NVVT---------------------REHMDKM---KNGCVVCNMGHS 166 (542)
Q Consensus 132 ~aDvVi~atG~~---~lI~---------------------~e~l~~m---k~GailvnvG~g 166 (542)
..|++|.+.|.. ++.+ +..+..| +.++.|+|+++.
T Consensus 86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~ 147 (255)
T 4g81_D 86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSL 147 (255)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeeh
Confidence 789999977621 1111 3445666 357899998864
No 337
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=96.47 E-value=0.0048 Score=64.42 Aligned_cols=84 Identities=12% Similarity=0.112 Sum_probs=59.1
Q ss_pred cEEEEEcCChhHHHHHHHHHh-CCCEEEEEe---CCchhhhhh-hcCC------------c--------eeeCHHHHhcC
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKG-LGCVIYITE---IDPICALQA-CMDG------------F--------SVVKLNEVIRT 132 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~-~Ga~Viv~d---~dp~r~~~A-~~~G------------~--------~v~~l~e~l~~ 132 (542)
.+|+|+|+|.+|..+|..|.. .|.+|++++ +++.+...+ ...| . ...++++++..
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 379999999999999999977 499999999 766554432 2222 1 11246677889
Q ss_pred CcEEEEcCCCcccCCHHHHh----ccCCCeEEEec
Q psy4626 133 VDIVVTATGNKNVVTREHMD----KMKNGCVVCNM 163 (542)
Q Consensus 133 aDvVi~atG~~~lI~~e~l~----~mk~Gailvnv 163 (542)
+|+||.|+.+... .+.++ .++++.++++.
T Consensus 83 aD~Vilav~~~~~--~~v~~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAFAH--EGYFQAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGGGH--HHHHHHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchHHH--HHHHHHHHhhCCCCcEEEEc
Confidence 9999999865432 23333 45678888874
No 338
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.43 E-value=0.0051 Score=62.55 Aligned_cols=83 Identities=14% Similarity=0.171 Sum_probs=59.7
Q ss_pred cEEEEEcCChhHHHHHHHHH-h-CCCEE-EEEeCCchhhhh-hhcCCc-e-eeCHHHHhc--CCcEEEEcCCCcccCCHH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLK-G-LGCVI-YITEIDPICALQ-ACMDGF-S-VVKLNEVIR--TVDIVVTATGNKNVVTRE 149 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~-~-~Ga~V-iv~d~dp~r~~~-A~~~G~-~-v~~l~e~l~--~aDvVi~atG~~~lI~~e 149 (542)
.+|+|+|+|.+|+..+..++ . .|+++ .++|+++.++.. +...|. . +.+.++++. ++|+|+.|+.+.... ..
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~-~~ 87 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHP-EM 87 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHH-HH
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHH-HH
Confidence 48999999999999999887 5 47774 578999987653 344465 3 456788875 799999998754322 23
Q ss_pred HHhccCCCeEEE
Q psy4626 150 HMDKMKNGCVVC 161 (542)
Q Consensus 150 ~l~~mk~Gailv 161 (542)
....++.|..++
T Consensus 88 ~~~al~~G~~v~ 99 (346)
T 3cea_A 88 TIYAMNAGLNVF 99 (346)
T ss_dssp HHHHHHTTCEEE
T ss_pred HHHHHHCCCEEE
Confidence 456677776544
No 339
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.42 E-value=0.013 Score=59.99 Aligned_cols=90 Identities=14% Similarity=0.120 Sum_probs=60.3
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCc-hhhhhhhc-----------CCcee--eCHHHHhcCCcEEEEcC
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDP-ICALQACM-----------DGFSV--VKLNEVIRTVDIVVTAT 140 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp-~r~~~A~~-----------~G~~v--~~l~e~l~~aDvVi~at 140 (542)
..++|+|+|.|.+|..+|..+...|. +|+.+|+++ ....++.. ....+ .+..+.+++||+||.+.
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVITA 86 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEeC
Confidence 46799999999999999999998898 999999984 22111110 01111 22246789999999998
Q ss_pred CCccc--------C--C-------HHHHhccCCCeEEEeccC
Q psy4626 141 GNKNV--------V--T-------REHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 141 G~~~l--------I--~-------~e~l~~mk~GailvnvG~ 165 (542)
|.+.- + | .+.+....|.+++++++-
T Consensus 87 g~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 87 GIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 74421 1 0 122333457888888873
No 340
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=96.41 E-value=0.0047 Score=62.96 Aligned_cols=83 Identities=18% Similarity=0.182 Sum_probs=59.2
Q ss_pred cEEEEEcCChhHHHHHHHHHhC-CCEEE-EEeCCchhhhh-hhcCCce-eeCHHHHhc--CCcEEEEcCCCcccCCHHHH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGL-GCVIY-ITEIDPICALQ-ACMDGFS-VVKLNEVIR--TVDIVVTATGNKNVVTREHM 151 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~-Ga~Vi-v~d~dp~r~~~-A~~~G~~-v~~l~e~l~--~aDvVi~atG~~~lI~~e~l 151 (542)
.+|+|||+|.+|...+..++.. +++++ ++|+++.++.. +...|.. +.++++++. ++|+|+.|+.+..-. .-..
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~-~~~~ 83 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHV-DLIT 83 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHH-HHHH
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhH-HHHH
Confidence 4799999999999999998876 67766 78999987654 4445654 457888886 899999998643222 2334
Q ss_pred hccCCCeEEE
Q psy4626 152 DKMKNGCVVC 161 (542)
Q Consensus 152 ~~mk~Gailv 161 (542)
..++.|.-++
T Consensus 84 ~al~~gk~v~ 93 (344)
T 3euw_A 84 RAVERGIPAL 93 (344)
T ss_dssp HHHHTTCCEE
T ss_pred HHHHcCCcEE
Confidence 4555565333
No 341
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=96.39 E-value=0.0098 Score=60.55 Aligned_cols=64 Identities=19% Similarity=0.279 Sum_probs=48.0
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhhhhhc---C------Cce--eeCHHHHhcCCcEEEEcCCCc
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICALQACM---D------GFS--VVKLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~~A~~---~------G~~--v~~l~e~l~~aDvVi~atG~~ 143 (542)
+|+|+|+|.+|..+|..+...|. +|+++|+++.++..... . ... ..+ .+.++++|+||.+.+.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~ 78 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVP 78 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCC
Confidence 79999999999999999988888 99999999865432111 1 111 223 35678999999998753
No 342
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.37 E-value=0.0049 Score=62.44 Aligned_cols=66 Identities=20% Similarity=0.161 Sum_probs=47.2
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhhh-hhc--CC------ceee-CHHHHhcCCcEEEEcCCCc
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICALQ-ACM--DG------FSVV-KLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~~-A~~--~G------~~v~-~l~e~l~~aDvVi~atG~~ 143 (542)
.+|+|+|.|.+|..+|..+...|. +|..+|+++.++.. +.. .+ ..+. +..+++++||+||.+.|.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~~ 78 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGAN 78 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC---
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 379999999999999999999898 99999999875431 111 11 1111 2235689999999998754
No 343
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=96.37 E-value=0.015 Score=56.50 Aligned_cols=38 Identities=21% Similarity=0.362 Sum_probs=33.9
Q ss_pred cccCcEEEEEcC-Ch--hHHHHHHHHHhCCCEEEEEeCCch
Q psy4626 74 MFGGKQVVLCGY-GE--VGKGCCQSLKGLGCVIYITEIDPI 111 (542)
Q Consensus 74 ~l~GktVvViG~-G~--IG~~vA~~l~~~Ga~Viv~d~dp~ 111 (542)
.+.||+++|.|. |. ||+.+|+.|...|++|+++++++.
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~ 44 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGER 44 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchH
Confidence 468999999998 45 999999999999999999998764
No 344
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.35 E-value=0.013 Score=60.12 Aligned_cols=90 Identities=19% Similarity=0.162 Sum_probs=61.0
Q ss_pred ccCcEEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhh-hhh--cCC------cee-eCHHHHhcCCcEEEEcCCC
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICAL-QAC--MDG------FSV-VKLNEVIRTVDIVVTATGN 142 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~-~A~--~~G------~~v-~~l~e~l~~aDvVi~atG~ 142 (542)
..+++|+|+|+|.+|..+|..+...|. ++.++|+++.++. .+. .+. ..+ .+..+.+++||+||.+.|.
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 357899999999999999999988777 9999999886543 111 111 111 2335678999999998774
Q ss_pred cc--------cCC---------HHHHhccCCCeEEEecc
Q psy4626 143 KN--------VVT---------REHMDKMKNGCVVCNMG 164 (542)
Q Consensus 143 ~~--------lI~---------~e~l~~mk~GailvnvG 164 (542)
+. ++. .+.+....|.+++++++
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt 125 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 32 111 12344445778888876
No 345
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.34 E-value=0.0072 Score=61.34 Aligned_cols=66 Identities=11% Similarity=0.100 Sum_probs=49.9
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhh------------cCCcee-eCHHHHhcCCcEEEEcCCC
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQAC------------MDGFSV-VKLNEVIRTVDIVVTATGN 142 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~------------~~G~~v-~~l~e~l~~aDvVi~atG~ 142 (542)
.++|+|+|+|.+|..+|..+...|. +|+++|+++.++.... ...... .+. ++++++|+||.+.|.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4689999999999999999998898 9999999986544210 011222 344 678999999999874
Q ss_pred c
Q psy4626 143 K 143 (542)
Q Consensus 143 ~ 143 (542)
+
T Consensus 83 p 83 (317)
T 2ewd_A 83 P 83 (317)
T ss_dssp S
T ss_pred C
Confidence 3
No 346
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.33 E-value=0.0085 Score=61.56 Aligned_cols=90 Identities=18% Similarity=0.163 Sum_probs=61.8
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhhh-h--hcCC-------cee-eCHHHHhcCCcEEEEcCCC
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICALQ-A--CMDG-------FSV-VKLNEVIRTVDIVVTATGN 142 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~~-A--~~~G-------~~v-~~l~e~l~~aDvVi~atG~ 142 (542)
...+|+|+|+|.+|..+|..+...|. +|+.+|+++.++.. + ..++ ..+ .+..+++++||+||.+.|.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~ 83 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGA 83 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEeccc
Confidence 35789999999999999999988886 99999998876431 1 1111 111 2234678999999998875
Q ss_pred cccC--C---------------HHHHhccCCCeEEEeccC
Q psy4626 143 KNVV--T---------------REHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 143 ~~lI--~---------------~e~l~~mk~GailvnvG~ 165 (542)
+.-- + .+.+....+.+++++++-
T Consensus 84 p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 84 NQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 3211 1 122334467888888883
No 347
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=96.32 E-value=0.015 Score=57.39 Aligned_cols=65 Identities=18% Similarity=0.321 Sum_probs=47.9
Q ss_pred CcEEEEEcCC-hhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-------eeCHH---H-------HhcCCcEEEE
Q psy4626 77 GKQVVLCGYG-EVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-------VVKLN---E-------VIRTVDIVVT 138 (542)
Q Consensus 77 GktVvViG~G-~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-------v~~l~---e-------~l~~aDvVi~ 138 (542)
.|+|+|.|.+ -||+.+|+.|...|++|+++|+++.+..+....+.. +.+.+ + .+...|++|.
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN 81 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN 81 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4899999975 699999999999999999999998776554443322 11221 1 1357899999
Q ss_pred cCC
Q psy4626 139 ATG 141 (542)
Q Consensus 139 atG 141 (542)
+.|
T Consensus 82 NAG 84 (247)
T 3ged_A 82 NAC 84 (247)
T ss_dssp CCC
T ss_pred CCC
Confidence 765
No 348
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.32 E-value=0.012 Score=59.37 Aligned_cols=87 Identities=14% Similarity=0.129 Sum_probs=59.0
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee--------------eCHHHHhcCCcEEEEcCCCc
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV--------------VKLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v--------------~~l~e~l~~aDvVi~atG~~ 143 (542)
.+++|+|+|.+|..+|..|...|.+|+++++++. ......|... .+..+.+..+|+||.|+-..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~vilavk~~ 80 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRDY--EAIAGNGLKVFSINGDFTLPHVKGYRAPEEIGPMDLVLVGLKTF 80 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTTH--HHHHHTCEEEEETTCCEEESCCCEESCHHHHCCCSEEEECCCGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCcH--HHHHhCCCEEEcCCCeEEEeeceeecCHHHcCCCCEEEEecCCC
Confidence 4799999999999999999999999999998873 2222334321 11123467899999997554
Q ss_pred ccCC--HHHHhccCCCeEEEeccCC
Q psy4626 144 NVVT--REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 144 ~lI~--~e~l~~mk~GailvnvG~g 166 (542)
.+-. .+.-..++++..++.+.-|
T Consensus 81 ~~~~~l~~l~~~l~~~~~iv~l~nG 105 (312)
T 3hn2_A 81 ANSRYEELIRPLVEEGTQILTLQNG 105 (312)
T ss_dssp GGGGHHHHHGGGCCTTCEEEECCSS
T ss_pred CcHHHHHHHHhhcCCCCEEEEecCC
Confidence 3321 1222346778888876655
No 349
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.32 E-value=0.0059 Score=65.35 Aligned_cols=88 Identities=15% Similarity=0.094 Sum_probs=59.0
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-CC-ce-----eeC---HHHHhcCCcEEEEcCCCccc
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM-DG-FS-----VVK---LNEVIRTVDIVVTATGNKNV 145 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-~G-~~-----v~~---l~e~l~~aDvVi~atG~~~l 145 (542)
.+++|+|+|+|.+|+.++..|...|.+|+++++++.++..... .+ .. +.+ +.+++.++|+||.+++...-
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~ 81 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFH 81 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccc
Confidence 4789999999999999999999999999999999876543221 22 22 122 33567899999999874211
Q ss_pred CCHHHHhccCCCeEEEecc
Q psy4626 146 VTREHMDKMKNGCVVCNMG 164 (542)
Q Consensus 146 I~~e~l~~mk~GailvnvG 164 (542)
..-..+.++.|..++..+
T Consensus 82 -~~i~~a~l~~g~~vvd~~ 99 (450)
T 1ff9_A 82 -ATVIKSAIRQKKHVVTTS 99 (450)
T ss_dssp -HHHHHHHHHHTCEEEESS
T ss_pred -hHHHHHHHhCCCeEEEee
Confidence 001223345566666554
No 350
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.31 E-value=0.0023 Score=64.28 Aligned_cols=91 Identities=18% Similarity=0.230 Sum_probs=60.5
Q ss_pred ccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchh----hhhhh-----------------------cCC-c-ee
Q psy4626 73 VMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPIC----ALQAC-----------------------MDG-F-SV 123 (542)
Q Consensus 73 ~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r----~~~A~-----------------------~~G-~-~v 123 (542)
..+.|++|+|+|.|.+|...++.|...|++|+|++.+... ..... ..| . .+
T Consensus 9 ~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ 88 (274)
T 1kyq_A 9 HQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEIYEY 88 (274)
T ss_dssp ECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCCCSEE
T ss_pred EEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCCeeEE
Confidence 3568999999999999999999999999999999865431 11111 112 2 32
Q ss_pred eC--H-HHHhc------CCcEEEEcCCCcccCCHHHHhccCCC---eEEEecc
Q psy4626 124 VK--L-NEVIR------TVDIVVTATGNKNVVTREHMDKMKNG---CVVCNMG 164 (542)
Q Consensus 124 ~~--l-~e~l~------~aDvVi~atG~~~lI~~e~l~~mk~G---ailvnvG 164 (542)
.. + .+.+. ++|+||.+||.+. ++.......+.- ++++|+.
T Consensus 89 i~~~~~~~dL~~l~~~~~adlViaat~d~~-~n~~I~~~Ar~~f~~~i~VNvv 140 (274)
T 1kyq_A 89 IRSDFKDEYLDLENENDAWYIIMTCIPDHP-ESARIYHLCKERFGKQQLVNVA 140 (274)
T ss_dssp ECSSCCGGGGCCSSTTCCEEEEEECCSCHH-HHHHHHHHHHHHHCTTSEEEET
T ss_pred EcCCCCHHHHhhcccCCCeEEEEEcCCChH-HHHHHHHHHHHhcCCCcEEEEC
Confidence 21 1 23345 8899999988653 344444455555 6777765
No 351
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=96.30 E-value=0.012 Score=63.11 Aligned_cols=106 Identities=17% Similarity=0.254 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEE-EEeC----------Cchhh---hhhhc----
Q psy4626 57 YMCRESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIY-ITEI----------DPICA---LQACM---- 118 (542)
Q Consensus 57 ~g~~~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Vi-v~d~----------dp~r~---~~A~~---- 118 (542)
||+-..+-+++.. .+..+.|++|+|-|+|++|..+|+.|..+|++|+ +.|. |+... .+.+.
T Consensus 233 ~Gv~~~~~~~l~~-~G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g 311 (470)
T 2bma_A 233 YGLVYFVLEVLKS-LNIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKG 311 (470)
T ss_dssp HHHHHHHHHHHHT-TTCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHh-ccCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCC
Confidence 3443333333333 3567899999999999999999999999999988 6773 22211 11000
Q ss_pred ---------CCceeeCHHHHh-cCCcEEEEcCCCcccCCHHHHhcc-CCCeEEEecc
Q psy4626 119 ---------DGFSVVKLNEVI-RTVDIVVTATGNKNVVTREHMDKM-KNGCVVCNMG 164 (542)
Q Consensus 119 ---------~G~~v~~l~e~l-~~aDvVi~atG~~~lI~~e~l~~m-k~GailvnvG 164 (542)
.+...++.++.+ ..|||++-|. ..+.|+.+....+ +.++.+|--|
T Consensus 312 ~v~~~~~~~~~a~~v~~~~~~~~~~DI~iPcA-~~~~I~~~na~~l~~~~ak~V~Eg 367 (470)
T 2bma_A 312 RIKEYLNHSSTAKYFPNEKPWGVPCTLAFPCA-TQNDVDLDQAKLLQKNGCILVGEG 367 (470)
T ss_dssp CGGGGGGTCSSCEECSSCCTTSSCCSEEEECS-STTCBCSHHHHHHHHTTCCEEECC
T ss_pred cHHHHHhhcCCcEEecCcCeeecCccEEEecc-ccCcCCHHHHHHHHhcCcEEEEeC
Confidence 023333333444 4799999987 5568886666665 4556555433
No 352
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.30 E-value=0.0068 Score=61.60 Aligned_cols=90 Identities=17% Similarity=0.137 Sum_probs=61.6
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc----CCc---eee--CHHHH-hcCCcEEEEcCCCc
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM----DGF---SVV--KLNEV-IRTVDIVVTATGNK 143 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~----~G~---~v~--~l~e~-l~~aDvVi~atG~~ 143 (542)
..+|++|+.+|+|+.|......++..|++|+.+|++|.....|.. .|. ++. +..+. -...|+|+.+...+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~~~ 199 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAALAE 199 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTTCS
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCCcc
Confidence 357999999999998766555566679999999999987665543 232 221 12221 25689999865432
Q ss_pred ---ccCCHHHHhccCCCeEEEecc
Q psy4626 144 ---NVVTREHMDKMKNGCVVCNMG 164 (542)
Q Consensus 144 ---~lI~~e~l~~mk~GailvnvG 164 (542)
.++ ++..+.|||||+++...
T Consensus 200 d~~~~l-~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 200 PKRRVF-RNIHRYVDTETRIIYRT 222 (298)
T ss_dssp CHHHHH-HHHHHHCCTTCEEEEEE
T ss_pred CHHHHH-HHHHHHcCCCcEEEEEc
Confidence 233 46778899999988543
No 353
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.29 E-value=0.0055 Score=78.16 Aligned_cols=102 Identities=16% Similarity=0.181 Sum_probs=74.3
Q ss_pred HHHHHHHhhcCccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc----CCce-eeC-----HHH-H
Q psy4626 62 SIIDSLKRSTDVMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACM----DGFS-VVK-----LNE-V 129 (542)
Q Consensus 62 s~~~ai~r~~~~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~----~G~~-v~~-----l~e-~ 129 (542)
..++++.+.. ...+|++|+|.|. |.||..+++.++.+|++|++++.++.+...+.. .|.. +.+ ..+ +
T Consensus 1654 TA~~al~~~a-~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i 1732 (2512)
T 2vz8_A 1654 TAYYSLVVRG-RMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHV 1732 (2512)
T ss_dssp HHHHHHTTTT-CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHH
T ss_pred HHHHHHHHHh-cCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHH
Confidence 3455554332 3458999999985 999999999999999999999988877665543 3443 221 222 2
Q ss_pred h-----cCCcEEEEcCCCcccCCHHHHhccCCCeEEEeccCC
Q psy4626 130 I-----RTVDIVVTATGNKNVVTREHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 130 l-----~~aDvVi~atG~~~lI~~e~l~~mk~GailvnvG~g 166 (542)
. +++|+|+++.|. ..+ .+.++.++++|.++.+|..
T Consensus 1733 ~~~t~g~GvDvVld~~g~-~~l-~~~l~~L~~~Gr~V~iG~~ 1772 (2512)
T 2vz8_A 1733 LRHTAGKGVDLVLNSLAE-EKL-QASVRCLAQHGRFLEIGKF 1772 (2512)
T ss_dssp HHTTTSCCEEEEEECCCH-HHH-HHHHTTEEEEEEEEECCCH
T ss_pred HHhcCCCCceEEEECCCc-hHH-HHHHHhcCCCcEEEEeecc
Confidence 1 368999999873 445 4789999999999999854
No 354
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.24 E-value=0.0096 Score=61.80 Aligned_cols=68 Identities=18% Similarity=0.250 Sum_probs=47.4
Q ss_pred ccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee---C---HHHHhcCCcEEEEcC
Q psy4626 73 VMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV---K---LNEVIRTVDIVVTAT 140 (542)
Q Consensus 73 ~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~---~---l~e~l~~aDvVi~at 140 (542)
..+.|++|+|+|.|.+|+.+++.++.+|.+|+++|.++........+.+... + +.++++.+|+|+...
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~~~ 83 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYEF 83 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEESC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeeecc
Confidence 3568999999999999999999999999999999977642211111111111 2 335567889875443
No 355
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.23 E-value=0.015 Score=58.92 Aligned_cols=86 Identities=14% Similarity=0.057 Sum_probs=60.5
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhh-hhh-----c--C--Ccee--eCHHHHhcCCcEEEEcCCCcc
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICAL-QAC-----M--D--GFSV--VKLNEVIRTVDIVVTATGNKN 144 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~-~A~-----~--~--G~~v--~~l~e~l~~aDvVi~atG~~~ 144 (542)
+|+|+|+|.+|..+|..+...|. +|..+|+++.++. .+. . . ...+ .+-.+++++||+||.+.|.+.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~~aDiVViaag~~~ 81 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLAR 81 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEECCCCCC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCCHHHhCCCCEEEECCCCCC
Confidence 79999999999999999988887 9999999997643 111 0 1 1122 222678899999999887542
Q ss_pred cC--C---------------HHHHhccCCCeEEEecc
Q psy4626 145 VV--T---------------REHMDKMKNGCVVCNMG 164 (542)
Q Consensus 145 lI--~---------------~e~l~~mk~GailvnvG 164 (542)
-- + .+.+....|.+++++++
T Consensus 82 kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs 118 (294)
T 1oju_A 82 KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 11 1 12344556888988888
No 356
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.23 E-value=0.013 Score=59.08 Aligned_cols=67 Identities=22% Similarity=0.298 Sum_probs=49.2
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhh-hhh--cCCc------ee--eCHHHHhcCCcEEEEcCCCc
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICAL-QAC--MDGF------SV--VKLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~-~A~--~~G~------~v--~~l~e~l~~aDvVi~atG~~ 143 (542)
-.+|+|+|+|.+|..++..|...|. +|+++|+++.+.. .+. ..+. .+ .+..+.++++|+||.+++.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~~~ 86 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPR 86 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCCCC
Confidence 3589999999999999999998898 9999999885543 111 1121 11 11235678999999998754
No 357
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=96.21 E-value=0.0074 Score=64.58 Aligned_cols=66 Identities=20% Similarity=0.256 Sum_probs=51.3
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhh-------------------hcCC-ce-eeCHHHHhcCCcEE
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQA-------------------CMDG-FS-VVKLNEVIRTVDIV 136 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A-------------------~~~G-~~-v~~l~e~l~~aDvV 136 (542)
+++.|+|.|-+|+.+|..+...|.+|+.+|+|+.|...- ...| .. ..+.++++..+|++
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad~~ 101 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATDAT 101 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSSEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCCce
Confidence 589999999999999999999999999999999764321 1111 11 23456778899999
Q ss_pred EEcCCCc
Q psy4626 137 VTATGNK 143 (542)
Q Consensus 137 i~atG~~ 143 (542)
|.|.+|+
T Consensus 102 ~I~VpTP 108 (444)
T 3vtf_A 102 FIAVGTP 108 (444)
T ss_dssp EECCCCC
T ss_pred EEEecCC
Confidence 9998765
No 358
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.19 E-value=0.019 Score=58.82 Aligned_cols=67 Identities=13% Similarity=0.137 Sum_probs=49.8
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhh-hh------h-c--CCcee--eCHHHHhcCCcEEEEcCCC
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICAL-QA------C-M--DGFSV--VKLNEVIRTVDIVVTATGN 142 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~-~A------~-~--~G~~v--~~l~e~l~~aDvVi~atG~ 142 (542)
...+|+|+|+|.+|..+|..+...|. +|..+|+++.++. .+ . . ....+ .+-.+++++||+||.+.|.
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~~a~~~aDiVIiaag~ 85 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYAAIEGADVVIVTAGV 85 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSGGGGTTCSEEEECCSC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCHHHHCCCCEEEEccCc
Confidence 45689999999999999999988887 9999999987642 11 0 0 11122 2223788999999999874
No 359
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=96.18 E-value=0.0057 Score=62.68 Aligned_cols=83 Identities=8% Similarity=0.013 Sum_probs=59.5
Q ss_pred cEEEEEcCChhHHHHHHHHHhC-CCEEE-EEeCCchhhhh-hhcCCce-eeCHHHHh--cCCcEEEEcCCCcccCCHHHH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGL-GCVIY-ITEIDPICALQ-ACMDGFS-VVKLNEVI--RTVDIVVTATGNKNVVTREHM 151 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~-Ga~Vi-v~d~dp~r~~~-A~~~G~~-v~~l~e~l--~~aDvVi~atG~~~lI~~e~l 151 (542)
.+|+|||+|.+|...+..++.. |++++ ++|+++.++.. +...|.. +.++++++ .++|+|+.|+.+..-. ....
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~-~~~~ 84 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHA-EVIE 84 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHH-HHHH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHH-HHHH
Confidence 4899999999999999999887 78855 78999987654 3334554 45788888 6799999998653222 2345
Q ss_pred hccCCCeEEE
Q psy4626 152 DKMKNGCVVC 161 (542)
Q Consensus 152 ~~mk~Gailv 161 (542)
..++.|.-++
T Consensus 85 ~al~~gk~vl 94 (354)
T 3db2_A 85 QCARSGKHIY 94 (354)
T ss_dssp HHHHTTCEEE
T ss_pred HHHHcCCEEE
Confidence 5566665444
No 360
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.17 E-value=0.021 Score=58.40 Aligned_cols=68 Identities=18% Similarity=0.230 Sum_probs=50.1
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhh-hhh--cC-------Ccee--eCHHHHhcCCcEEEEcCCC
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICAL-QAC--MD-------GFSV--VKLNEVIRTVDIVVTATGN 142 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~-~A~--~~-------G~~v--~~l~e~l~~aDvVi~atG~ 142 (542)
...+|+|+|+|.+|..+|..+...|. +|..+|+++.++. .+. .+ ...+ .+..+++++||+||.+.|.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGV 83 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCc
Confidence 35689999999999999999988777 9999999987642 111 11 1122 2334688999999998874
Q ss_pred c
Q psy4626 143 K 143 (542)
Q Consensus 143 ~ 143 (542)
+
T Consensus 84 p 84 (321)
T 3p7m_A 84 P 84 (321)
T ss_dssp C
T ss_pred C
Confidence 3
No 361
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=96.17 E-value=0.0081 Score=57.18 Aligned_cols=68 Identities=15% Similarity=0.206 Sum_probs=49.9
Q ss_pred ccCcEEEEEcC-ChhHHHHHHHHHhCCC--EEEEEeCCchhhhhhhcCCcee--eC------HHHHhcCCcEEEEcCCC
Q psy4626 75 FGGKQVVLCGY-GEVGKGCCQSLKGLGC--VIYITEIDPICALQACMDGFSV--VK------LNEVIRTVDIVVTATGN 142 (542)
Q Consensus 75 l~GktVvViG~-G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~~A~~~G~~v--~~------l~e~l~~aDvVi~atG~ 142 (542)
+.+++++|+|. |.||+.+++.|...|. +|+++++++.+.......+..+ .+ ++++++++|+||.+.|.
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~ 94 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT 94 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence 46899999995 9999999999999999 9999998876433211112221 12 23456789999998874
No 362
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=96.16 E-value=0.014 Score=58.22 Aligned_cols=39 Identities=18% Similarity=0.349 Sum_probs=35.2
Q ss_pred ccccCcEEEEEcCC---hhHHHHHHHHHhCCCEEEEEeCCch
Q psy4626 73 VMFGGKQVVLCGYG---EVGKGCCQSLKGLGCVIYITEIDPI 111 (542)
Q Consensus 73 ~~l~GktVvViG~G---~IG~~vA~~l~~~Ga~Viv~d~dp~ 111 (542)
..+.||+++|.|.+ -||+.+|+.|...|++|+++++++.
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~ 67 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSET 67 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChH
Confidence 35789999999986 8999999999999999999998864
No 363
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.16 E-value=0.0068 Score=62.14 Aligned_cols=83 Identities=18% Similarity=0.266 Sum_probs=59.5
Q ss_pred cEEEEEcCChhHHHHHHHHHhC--CCEEE-EEeCCchhhhh-hhcCCce-eeCHHHHhc--CCcEEEEcCCCcccCCHHH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGL--GCVIY-ITEIDPICALQ-ACMDGFS-VVKLNEVIR--TVDIVVTATGNKNVVTREH 150 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~--Ga~Vi-v~d~dp~r~~~-A~~~G~~-v~~l~e~l~--~aDvVi~atG~~~lI~~e~ 150 (542)
.+|+|||+|.+|...+..++.. +++++ ++|+++.++.. +...|.. +.++++++. ++|+|+.|+.+..-. ...
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~-~~~ 92 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLHP-TQS 92 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGGHH-HHH
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHHHH-HHH
Confidence 4899999999999999999877 77755 78999987654 3344654 457888885 899999998653222 234
Q ss_pred HhccCCCeEEE
Q psy4626 151 MDKMKNGCVVC 161 (542)
Q Consensus 151 l~~mk~Gailv 161 (542)
...++.|.-++
T Consensus 93 ~~al~~gk~v~ 103 (354)
T 3q2i_A 93 IECSEAGFHVM 103 (354)
T ss_dssp HHHHHTTCEEE
T ss_pred HHHHHCCCCEE
Confidence 45566665554
No 364
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=96.15 E-value=0.0083 Score=60.58 Aligned_cols=85 Identities=14% Similarity=0.189 Sum_probs=58.5
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeC----------H-HHHhcCCcEEEEcCCCcccC
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVK----------L-NEVIRTVDIVVTATGNKNVV 146 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~----------l-~e~l~~aDvVi~atG~~~lI 146 (542)
.+++|+|+|.+|..++..|. .|.+|+++++++.+.......|..... . .+....+|+||.|+-...+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~~~- 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQHQL- 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGGGH-
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHHHH-
Confidence 58999999999999999999 899999999988665443344544321 1 2345789999999754332
Q ss_pred CHHHHhcc---CCCeEEEeccCC
Q psy4626 147 TREHMDKM---KNGCVVCNMGHS 166 (542)
Q Consensus 147 ~~e~l~~m---k~GailvnvG~g 166 (542)
.+.++.+ .++. ++.+.-|
T Consensus 81 -~~~l~~l~~~~~~~-ivs~~nG 101 (307)
T 3ego_A 81 -QSVFSSLERIGKTN-ILFLQNG 101 (307)
T ss_dssp -HHHHHHTTSSCCCE-EEECCSS
T ss_pred -HHHHHHhhcCCCCe-EEEecCC
Confidence 3445544 3455 6655544
No 365
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.13 E-value=0.0088 Score=60.41 Aligned_cols=82 Identities=17% Similarity=0.242 Sum_probs=57.3
Q ss_pred EEEEEcCChhHHHH-HHHHHhCCCEEE-EEeCCchhhhh-hhcCCce--eeCHHHHhc--CCcEEEEcCCCcccCCHHHH
Q psy4626 79 QVVLCGYGEVGKGC-CQSLKGLGCVIY-ITEIDPICALQ-ACMDGFS--VVKLNEVIR--TVDIVVTATGNKNVVTREHM 151 (542)
Q Consensus 79 tVvViG~G~IG~~v-A~~l~~~Ga~Vi-v~d~dp~r~~~-A~~~G~~--v~~l~e~l~--~aDvVi~atG~~~lI~~e~l 151 (542)
+|+|||+|.+|+.. +..++..|.+++ ++|+++.++.. +...|.. +.+.++++. ++|+|+.++.+..-. ....
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~-~~~~ 80 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHR-EQTL 80 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHH-HHHH
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhH-HHHH
Confidence 69999999999987 767766788765 78999987653 3444553 456788875 599999998643222 2344
Q ss_pred hccCCCeEEE
Q psy4626 152 DKMKNGCVVC 161 (542)
Q Consensus 152 ~~mk~Gailv 161 (542)
..++.|.-++
T Consensus 81 ~al~~Gk~v~ 90 (332)
T 2glx_A 81 AAIRAGKHVL 90 (332)
T ss_dssp HHHHTTCEEE
T ss_pred HHHHCCCeEE
Confidence 5667776443
No 366
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=96.13 E-value=0.023 Score=60.73 Aligned_cols=104 Identities=14% Similarity=0.160 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHhhcCccccCcEEEEEcCChhHHHHHHHHHhCCCEEE-EEeCC----------chhhhh-----hh---
Q psy4626 57 YMCRESIIDSLKRSTDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIY-ITEID----------PICALQ-----AC--- 117 (542)
Q Consensus 57 ~g~~~s~~~ai~r~~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Vi-v~d~d----------p~r~~~-----A~--- 117 (542)
||+-..+-+++.. .+..+.|++|+|-|+|++|..+|+.|...|++|+ +.|.+ +..+.. ..
T Consensus 220 ~Gv~~~~~~~~~~-~g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~ 298 (456)
T 3r3j_A 220 YGVVYFAENVLKD-LNDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRL 298 (456)
T ss_dssp HHHHHHHHHHHHT-TTCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCC
T ss_pred hHHHHHHHHHHHH-cCCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCc
Confidence 3444433333333 3567899999999999999999999999999986 77743 222110 00
Q ss_pred --------cCCceeeCHHHHh-cCCcEEEEcCCCcccCCHHHHhcc-CCCeEEEe
Q psy4626 118 --------MDGFSVVKLNEVI-RTVDIVVTATGNKNVVTREHMDKM-KNGCVVCN 162 (542)
Q Consensus 118 --------~~G~~v~~l~e~l-~~aDvVi~atG~~~lI~~e~l~~m-k~Gailvn 162 (542)
..+...++.++.+ ..|||++-|.. .+.|+.+....+ +.++.+|-
T Consensus 299 ~v~~~~~~~~~a~~v~~~~i~~~~~DI~iPcA~-~~~I~~~na~~l~~~~ak~V~ 352 (456)
T 3r3j_A 299 RLKEYLKYSKTAKYFENQKPWNIPCDIAFPCAT-QNEINENDADLFIQNKCKMIV 352 (456)
T ss_dssp CGGGGGGTCSSCEEECSCCGGGSCCSEEEECSC-TTCBCHHHHHHHHHHTCCEEE
T ss_pred chhhhhhcCCCceEeCCccccccCccEEEeCCC-ccchhhHHHHHHHhcCCeEEE
Confidence 0234445545554 57999999864 468988777776 23454443
No 367
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=96.13 E-value=0.011 Score=67.22 Aligned_cols=88 Identities=25% Similarity=0.328 Sum_probs=59.9
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc---------------CCc-------eeeCHHHHhcCCcE
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM---------------DGF-------SVVKLNEVIRTVDI 135 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~---------------~G~-------~v~~l~e~l~~aDv 135 (542)
++|+|+|+|.+|.++|..+...|.+|+++|+++..+..+.. .+. ...+..+.+.+||+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aDl 396 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELSTVDL 396 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGGSCSE
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHhhCCE
Confidence 69999999999999999999999999999999865432211 000 11122345789999
Q ss_pred EEEcCCCcccCCHH----HHhccCCCeEEE-eccC
Q psy4626 136 VVTATGNKNVVTRE----HMDKMKNGCVVC-NMGH 165 (542)
Q Consensus 136 Vi~atG~~~lI~~e----~l~~mk~Gailv-nvG~ 165 (542)
||++.--.--+..+ .=+.+++++++. |++.
T Consensus 397 VIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs 431 (742)
T 3zwc_A 397 VVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA 431 (742)
T ss_dssp EEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred EEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc
Confidence 99986321112222 233569999998 5553
No 368
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.09 E-value=0.011 Score=62.92 Aligned_cols=69 Identities=22% Similarity=0.379 Sum_probs=51.2
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchh----hhhhhcCCceee---CHHHHhcC-CcEEEEcCCC
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPIC----ALQACMDGFSVV---KLNEVIRT-VDIVVTATGN 142 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r----~~~A~~~G~~v~---~l~e~l~~-aDvVi~atG~ 142 (542)
.+.|++|.|+|.|..|..+|+.|+..|.+|+++|.++.. ...-...|..+. ..++.+.+ +|+||.++|-
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi 82 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGI 82 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcC
Confidence 357999999999999999999999999999999986531 112234566543 12344565 8999988774
No 369
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.07 E-value=0.011 Score=59.78 Aligned_cols=82 Identities=15% Similarity=0.081 Sum_probs=58.1
Q ss_pred EEEEEcCChhHHHHHHHHHhC-CCEE-EEEeCCchhhhh-hhcCCc-e-eeCHHHHh-cCCcEEEEcCCCcccCCHHHHh
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGL-GCVI-YITEIDPICALQ-ACMDGF-S-VVKLNEVI-RTVDIVVTATGNKNVVTREHMD 152 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~-Ga~V-iv~d~dp~r~~~-A~~~G~-~-v~~l~e~l-~~aDvVi~atG~~~lI~~e~l~ 152 (542)
+|+|||+|.+|...+..++.. ++++ .++|+++.++.. +...|. . +.+.++++ .++|+|+.|+.+..-. .-...
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~-~~~~~ 81 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLHF-AQAKA 81 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGHH-HHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHHH-HHHHH
Confidence 799999999999999998876 5665 478999887653 344453 3 45788888 7899999998643211 23445
Q ss_pred ccCCCeEEE
Q psy4626 153 KMKNGCVVC 161 (542)
Q Consensus 153 ~mk~Gailv 161 (542)
.++.|.-++
T Consensus 82 al~~gk~V~ 90 (325)
T 2ho3_A 82 ALSAGKHVI 90 (325)
T ss_dssp HHHTTCEEE
T ss_pred HHHcCCcEE
Confidence 567776433
No 370
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.06 E-value=0.0091 Score=58.35 Aligned_cols=66 Identities=17% Similarity=0.097 Sum_probs=50.0
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee--CHHHH-hcCCcEEEEcCCC
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV--KLNEV-IRTVDIVVTATGN 142 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~--~l~e~-l~~aDvVi~atG~ 142 (542)
.++|+|+|+|.||+.+++.|...|.+|+++++++.+.......+++++ ++.+. +.++|+||.+.+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~ 73 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTAP 73 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCCc
Confidence 368999999999999999999999999999998876544333454432 21111 6789999998764
No 371
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=96.05 E-value=0.027 Score=56.02 Aligned_cols=39 Identities=23% Similarity=0.348 Sum_probs=35.1
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchh
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPIC 112 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r 112 (542)
.+.||+++|.|. |-||+.+|+.|...|++|+++++++..
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~ 83 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEG 83 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 468999999998 679999999999999999999988754
No 372
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=96.05 E-value=0.0092 Score=58.47 Aligned_cols=38 Identities=16% Similarity=0.357 Sum_probs=34.7
Q ss_pred ccCcEEEEEcC---ChhHHHHHHHHHhCCCEEEEEeCCchh
Q psy4626 75 FGGKQVVLCGY---GEVGKGCCQSLKGLGCVIYITEIDPIC 112 (542)
Q Consensus 75 l~GktVvViG~---G~IG~~vA~~l~~~Ga~Viv~d~dp~r 112 (542)
+.||+++|.|. |-||+.+|+.|...|++|+++++++.+
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~ 45 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR 45 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHH
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHH
Confidence 67999999994 899999999999999999999988755
No 373
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=96.04 E-value=0.014 Score=57.86 Aligned_cols=68 Identities=16% Similarity=0.206 Sum_probs=47.4
Q ss_pred cccCcEEEEEcCC-hhHHHHHHHHHhCCCEEEEEeCCchhhh-hhhcCCceeeCHH----------HHhcCCcEEEEcCC
Q psy4626 74 MFGGKQVVLCGYG-EVGKGCCQSLKGLGCVIYITEIDPICAL-QACMDGFSVVKLN----------EVIRTVDIVVTATG 141 (542)
Q Consensus 74 ~l~GktVvViG~G-~IG~~vA~~l~~~Ga~Viv~d~dp~r~~-~A~~~G~~v~~l~----------e~l~~aDvVi~atG 141 (542)
.+.||+++|.|.+ -||+.+|+.|...|++|++++++..... ++.....++.+.+ +.+...|++|.+.|
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG 87 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLG 87 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCC
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5789999999986 5999999999999999999998754321 1110011222222 12357899999765
No 374
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.04 E-value=0.019 Score=59.20 Aligned_cols=88 Identities=14% Similarity=0.141 Sum_probs=60.2
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhhh-hh--cCC--c----ee---eCHHHHhcCCcEEEEcCC
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICALQ-AC--MDG--F----SV---VKLNEVIRTVDIVVTATG 141 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~~-A~--~~G--~----~v---~~l~e~l~~aDvVi~atG 141 (542)
+.++|+|+|.|.+|..+|..+...|. +|..+|+++.++.. +. .++ + .+ .+.++ +++||+||.+.|
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 57899999999999999999988887 99999998865431 11 011 1 11 13333 899999999877
Q ss_pred Ccc--------cCC---------HHHHhccCCCeEEEecc
Q psy4626 142 NKN--------VVT---------REHMDKMKNGCVVCNMG 164 (542)
Q Consensus 142 ~~~--------lI~---------~e~l~~mk~GailvnvG 164 (542)
.+. ++. .+.+....+.+++++++
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt 138 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP 138 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence 542 111 12344446788888877
No 375
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=96.03 E-value=0.018 Score=56.15 Aligned_cols=93 Identities=15% Similarity=0.245 Sum_probs=62.1
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-CC--ce-----eeCHH---HH-------hcCCc
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACM-DG--FS-----VVKLN---EV-------IRTVD 134 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-~G--~~-----v~~l~---e~-------l~~aD 134 (542)
.+.||+++|.|. |-||+.+|+.|...|++|+++++++.+..+... .+ +. +.+.+ ++ +...|
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 367999999998 579999999999999999999998876543211 11 11 12222 11 24789
Q ss_pred EEEEcCCCccc-----CC-------------------HHHHhccCCCeEEEeccCC
Q psy4626 135 IVVTATGNKNV-----VT-------------------REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 135 vVi~atG~~~l-----I~-------------------~e~l~~mk~GailvnvG~g 166 (542)
++|.+.|.... .+ ...+..|++++.++|+++.
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 140 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSV 140 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECCh
Confidence 99998763211 01 2234556677888888764
No 376
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=95.99 E-value=0.037 Score=60.22 Aligned_cols=122 Identities=14% Similarity=0.216 Sum_probs=87.2
Q ss_pred HhHHHHHHHHHHHHH---hhcCccccCcEEEEEcCChhHHHHHHHHHh----CCC-------EEEEEeCCc---------
Q psy4626 54 DNLYMCRESIIDSLK---RSTDVMFGGKQVVLCGYGEVGKGCCQSLKG----LGC-------VIYITEIDP--------- 110 (542)
Q Consensus 54 d~~~g~~~s~~~ai~---r~~~~~l~GktVvViG~G~IG~~vA~~l~~----~Ga-------~Viv~d~dp--------- 110 (542)
|...||+-.++.++. +.++..+...++++.|+|.-|.++|..+.. .|+ +++++|..-
T Consensus 256 DDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r~~l 335 (555)
T 1gq2_A 256 DDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASL 335 (555)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSC
T ss_pred CccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeeeCCCCCc
Confidence 455677755544443 345677888999999999999999999887 784 689888632
Q ss_pred --hhhhhhhcCCceeeCHHHHhc--CCcEEEEcCCCcccCCHHHHhccC---CCeEEEeccCCCc--ccChHhhc
Q psy4626 111 --ICALQACMDGFSVVKLNEVIR--TVDIVVTATGNKNVVTREHMDKMK---NGCVVCNMGHSNT--EIDVNSLR 176 (542)
Q Consensus 111 --~r~~~A~~~G~~v~~l~e~l~--~aDvVi~atG~~~lI~~e~l~~mk---~GailvnvG~g~~--eid~~aL~ 176 (542)
.+...|.... ..-++.++++ ++|++|-+++.+++++++.++.|. +.-+|.-.+.... |+..+...
T Consensus 336 ~~~k~~~A~~~~-~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~~pe~a~ 409 (555)
T 1gq2_A 336 TPEKEHFAHEHC-EMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTSKAECTAEQLY 409 (555)
T ss_dssp CTTGGGGCBSCC-CCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSGGGCSSCHHHHH
T ss_pred hHHHHHHHhhcC-CCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCCCccCcCHHHHH
Confidence 2222222211 2346888887 599999999878999999999996 6777777776543 77766544
No 377
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=95.97 E-value=0.02 Score=58.51 Aligned_cols=86 Identities=13% Similarity=0.151 Sum_probs=58.4
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhh-hhh--c-----C--Ccee--eCHHHHhcCCcEEEEcCCCcc
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICAL-QAC--M-----D--GFSV--VKLNEVIRTVDIVVTATGNKN 144 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~-~A~--~-----~--G~~v--~~l~e~l~~aDvVi~atG~~~ 144 (542)
+|+|+|+|.+|..+|..+...|. +|+.+|+++.++. .+. . . ...+ .+..+.+++||+||.+.|.+.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~~ 81 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLPR 81 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC--
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCCC
Confidence 79999999999999999987776 9999999986642 111 0 1 1122 245678899999999987542
Q ss_pred c---CC--------------HHHHhccCCCeEEEecc
Q psy4626 145 V---VT--------------REHMDKMKNGCVVCNMG 164 (542)
Q Consensus 145 l---I~--------------~e~l~~mk~GailvnvG 164 (542)
- -. .+.+....|.+++++++
T Consensus 82 kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 118 (314)
T 3nep_X 82 SPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA 118 (314)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred CCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence 1 11 12334445778888877
No 378
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=95.96 E-value=0.008 Score=60.78 Aligned_cols=80 Identities=19% Similarity=0.368 Sum_probs=51.3
Q ss_pred cEEEEEcCChhHHHHHHHHHh-CCCEEE-EEeCCchhhhhhhcCCcee---eCHHHHhcCCcEEEEcCCCcccCCHHHHh
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKG-LGCVIY-ITEIDPICALQACMDGFSV---VKLNEVIRTVDIVVTATGNKNVVTREHMD 152 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~-~Ga~Vi-v~d~dp~r~~~A~~~G~~v---~~l~e~l~~aDvVi~atG~~~lI~~e~l~ 152 (542)
-+|+|+|+|.||+..+..++. -+++++ ++|++|.++.. .|..+ .++.+. .++|+|+.|+.+..-. .....
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~~~~~~~~l~~~-~~~DvViiatp~~~h~-~~~~~ 84 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQPFRVVSDIEQL-ESVDVALVCSPSREVE-RTALE 84 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCTTSCEESSGGGS-SSCCEEEECSCHHHHH-HHHHH
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCCCcCCHHHHHhC-CCCCEEEECCCchhhH-HHHHH
Confidence 489999999999999999886 467877 68998876543 44332 233333 6899999998753222 23455
Q ss_pred ccCCCeEEEe
Q psy4626 153 KMKNGCVVCN 162 (542)
Q Consensus 153 ~mk~Gailvn 162 (542)
.++.|..++.
T Consensus 85 al~aG~~Vi~ 94 (304)
T 3bio_A 85 ILKKGICTAD 94 (304)
T ss_dssp HHTTTCEEEE
T ss_pred HHHcCCeEEE
Confidence 6677777664
No 379
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=95.95 E-value=0.0068 Score=61.06 Aligned_cols=82 Identities=20% Similarity=0.265 Sum_probs=56.9
Q ss_pred cEEEEEcCChhHHHHHHHHHhC-CCEE-EEEeCCchhhhhhhcCCce-eeCHHHHhc--CCcEEEEcCCCcccCCHHHHh
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGL-GCVI-YITEIDPICALQACMDGFS-VVKLNEVIR--TVDIVVTATGNKNVVTREHMD 152 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~-Ga~V-iv~d~dp~r~~~A~~~G~~-v~~l~e~l~--~aDvVi~atG~~~lI~~e~l~ 152 (542)
.+|+|||+|.+|+..+..++.. +.++ .++|+++.++...... .. ..+.++++. ++|+|+.|+.+.... .-...
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp~~~h~-~~~~~ 88 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATPPATHA-EITLA 88 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESCGGGHH-HHHHH
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCChHHHH-HHHHH
Confidence 4899999999999999998876 5664 5899998876543333 33 346778874 799999997643222 23345
Q ss_pred ccCCCeEEE
Q psy4626 153 KMKNGCVVC 161 (542)
Q Consensus 153 ~mk~Gailv 161 (542)
.++.|.-++
T Consensus 89 al~~Gk~v~ 97 (315)
T 3c1a_A 89 AIASGKAVL 97 (315)
T ss_dssp HHHTTCEEE
T ss_pred HHHCCCcEE
Confidence 567776433
No 380
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=95.94 E-value=0.0081 Score=60.27 Aligned_cols=83 Identities=7% Similarity=0.018 Sum_probs=59.0
Q ss_pred cEEEEEcCChhHHH-HHHHHHh-CCCEEE-EEeCCchhhhh-hhcCCce-eeCHHHHhcCCcEEEEcCCCcccCCHHHHh
Q psy4626 78 KQVVLCGYGEVGKG-CCQSLKG-LGCVIY-ITEIDPICALQ-ACMDGFS-VVKLNEVIRTVDIVVTATGNKNVVTREHMD 152 (542)
Q Consensus 78 ktVvViG~G~IG~~-vA~~l~~-~Ga~Vi-v~d~dp~r~~~-A~~~G~~-v~~l~e~l~~aDvVi~atG~~~lI~~e~l~ 152 (542)
.+++|||+|.+|.. .+..++. -|++++ ++|+++.++.. +...|.. +.++++++.++|+|+.|+.+..-. .-...
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~-~~~~~ 85 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHY-EIIKI 85 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHH-HHHHH
T ss_pred CcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHH-HHHHH
Confidence 58999999999986 7887876 477777 79999987654 3334544 467888888999999998653222 23345
Q ss_pred ccCCCeEEE
Q psy4626 153 KMKNGCVVC 161 (542)
Q Consensus 153 ~mk~Gailv 161 (542)
.++.|.-++
T Consensus 86 al~~gk~vl 94 (308)
T 3uuw_A 86 LLNLGVHVY 94 (308)
T ss_dssp HHHTTCEEE
T ss_pred HHHCCCcEE
Confidence 566665444
No 381
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=95.94 E-value=0.0075 Score=61.01 Aligned_cols=82 Identities=13% Similarity=0.142 Sum_probs=56.6
Q ss_pred EEEEEcCChhHH-HHHHHHHhC-CCEEEEEeCCchhhhh-hhcCCce--eeCHHHHh-cCCcEEEEcCCCcccCCHHHHh
Q psy4626 79 QVVLCGYGEVGK-GCCQSLKGL-GCVIYITEIDPICALQ-ACMDGFS--VVKLNEVI-RTVDIVVTATGNKNVVTREHMD 152 (542)
Q Consensus 79 tVvViG~G~IG~-~vA~~l~~~-Ga~Viv~d~dp~r~~~-A~~~G~~--v~~l~e~l-~~aDvVi~atG~~~lI~~e~l~ 152 (542)
+|+|||+|.+|. ..+..++.. +.+++++|+++.++.. +...|.. +.+..+.+ .++|+|+.|+.+..-. .....
T Consensus 4 ~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~-~~~~~ 82 (323)
T 1xea_A 4 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHS-TLAAF 82 (323)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHH-HHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHH-HHHHH
Confidence 799999999998 488888765 6788899999987653 3344654 34445555 6899999998643222 23345
Q ss_pred ccCCCe-EEE
Q psy4626 153 KMKNGC-VVC 161 (542)
Q Consensus 153 ~mk~Ga-ilv 161 (542)
.++.|. +++
T Consensus 83 al~~Gk~V~~ 92 (323)
T 1xea_A 83 FLHLGIPTFV 92 (323)
T ss_dssp HHHTTCCEEE
T ss_pred HHHCCCeEEE
Confidence 667776 444
No 382
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=95.93 E-value=0.01 Score=60.45 Aligned_cols=67 Identities=27% Similarity=0.348 Sum_probs=48.0
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhhh-hhc--CC-------cee-eCHHHHhcCCcEEEEcCCCc
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICALQ-ACM--DG-------FSV-VKLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~~-A~~--~G-------~~v-~~l~e~l~~aDvVi~atG~~ 143 (542)
-++|+|+|.|.+|..+|..++..|. +|..+|+++.++.. +.. +. ..+ .+..+++++||+||.+.|.+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 4689999999999999999987675 89999999864321 110 00 111 12346789999999997643
No 383
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.93 E-value=0.0082 Score=64.42 Aligned_cols=66 Identities=24% Similarity=0.314 Sum_probs=52.0
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh-cCCceee-----C---HHHH-hcCCcEEEEcCCC
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQAC-MDGFSVV-----K---LNEV-IRTVDIVVTATGN 142 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~-~~G~~v~-----~---l~e~-l~~aDvVi~atG~ 142 (542)
..+++|+|+|.+|..+|+.|...|.+|+++|.|+.+..... ..++.++ + ++++ +..||+++-+|++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~ 78 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNT 78 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCC
Confidence 45899999999999999999999999999999998876543 3455443 1 2333 5789999988864
No 384
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=95.93 E-value=0.014 Score=62.41 Aligned_cols=93 Identities=23% Similarity=0.260 Sum_probs=62.5
Q ss_pred cCccccCcEEEEEcCChhHHHHHHHHHhCCCEEEE-EeC-----------Cchh---hhhhh-cC-----------Ccee
Q psy4626 71 TDVMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYI-TEI-----------DPIC---ALQAC-MD-----------GFSV 123 (542)
Q Consensus 71 ~~~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv-~d~-----------dp~r---~~~A~-~~-----------G~~v 123 (542)
.+..+.|++|+|.|+|++|..+|+.|...|++|+. .|. ||.. +.... .. +...
T Consensus 224 ~G~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~ 303 (449)
T 1bgv_A 224 ENDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQF 303 (449)
T ss_dssp TTCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEE
T ss_pred ccCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEE
Confidence 35678999999999999999999999999999885 662 3321 11100 00 2333
Q ss_pred eCHHHHh-cCCcEEEEcCCCcccCCHHHHhccC-CCeEEEecc
Q psy4626 124 VKLNEVI-RTVDIVVTATGNKNVVTREHMDKMK-NGCVVCNMG 164 (542)
Q Consensus 124 ~~l~e~l-~~aDvVi~atG~~~lI~~e~l~~mk-~GailvnvG 164 (542)
++.++++ ..|||++-|. ..+.|+.+....++ .|+.+|--|
T Consensus 304 i~~~e~~~~~~Dil~P~A-~~~~I~~~na~~l~a~g~kiV~Eg 345 (449)
T 1bgv_A 304 FPGEKPWGQKVDIIMPCA-TQNDVDLEQAKKIVANNVKYYIEV 345 (449)
T ss_dssp EETCCGGGSCCSEEECCS-CTTCBCHHHHHHHHHTTCCEEECC
T ss_pred eCchhhhcCCcceeeccc-cccccchhhHHHHHhcCCeEEEeC
Confidence 3333344 4799999876 55688877777775 466665444
No 385
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=95.92 E-value=0.0081 Score=61.29 Aligned_cols=82 Identities=18% Similarity=0.245 Sum_probs=58.5
Q ss_pred EEEEEcCChhHHHHHHHHHhC-CCEEE-EEeCCchhhhh-hhcCCc--eeeCHHHHhc--CCcEEEEcCCCcccCCHHHH
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGL-GCVIY-ITEIDPICALQ-ACMDGF--SVVKLNEVIR--TVDIVVTATGNKNVVTREHM 151 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~-Ga~Vi-v~d~dp~r~~~-A~~~G~--~v~~l~e~l~--~aDvVi~atG~~~lI~~e~l 151 (542)
+|+|||+|.+|...+..++.. +++++ ++|+++.++.. +...|. .+.++++++. ++|+|+.|+.+..-. ....
T Consensus 4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~-~~~~ 82 (344)
T 3ezy_A 4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHS-ELVI 82 (344)
T ss_dssp EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHH-HHHH
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcchH-HHHH
Confidence 799999999999999988765 67766 68999987654 334454 2567888885 899999998653222 2344
Q ss_pred hccCCCeEEE
Q psy4626 152 DKMKNGCVVC 161 (542)
Q Consensus 152 ~~mk~Gailv 161 (542)
..++.|.-++
T Consensus 83 ~al~~gk~v~ 92 (344)
T 3ezy_A 83 ACAKAKKHVF 92 (344)
T ss_dssp HHHHTTCEEE
T ss_pred HHHhcCCeEE
Confidence 5566666444
No 386
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=95.88 E-value=0.009 Score=61.13 Aligned_cols=66 Identities=15% Similarity=0.167 Sum_probs=49.7
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhhhh---cC-------C--cee-eCHHHHhcCCcEEEEcCCC
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQAC---MD-------G--FSV-VKLNEVIRTVDIVVTATGN 142 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~A~---~~-------G--~~v-~~l~e~l~~aDvVi~atG~ 142 (542)
..+|+|+|+|.+|..+|..+...|. +|..+|+++.++.... .. . ... .+. +++++||+||.+.|.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g~ 82 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAGF 82 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 3589999999999999999998897 9999999987653110 01 1 112 344 678999999999875
Q ss_pred c
Q psy4626 143 K 143 (542)
Q Consensus 143 ~ 143 (542)
+
T Consensus 83 p 83 (322)
T 1t2d_A 83 T 83 (322)
T ss_dssp S
T ss_pred C
Confidence 3
No 387
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=95.88 E-value=0.014 Score=60.58 Aligned_cols=39 Identities=21% Similarity=0.261 Sum_probs=35.6
Q ss_pred ccccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCch
Q psy4626 73 VMFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPI 111 (542)
Q Consensus 73 ~~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~ 111 (542)
..+.|++|+|+|.|.+|+.+++.++.+|.+|+++|.++.
T Consensus 8 ~~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 8 KLKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 356899999999999999999999999999999997764
No 388
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=95.87 E-value=0.08 Score=53.87 Aligned_cols=120 Identities=19% Similarity=0.311 Sum_probs=80.8
Q ss_pred hcccccceeecCch----hhhHHHHhHHHHHHHHHHHHHhhcCccccCcEEEEEcCC---hhHHHHHHHHHhCCCEEEEE
Q psy4626 34 AGKLTVPAMNVNDS----VTKTKFDNLYMCRESIIDSLKRSTDVMFGGKQVVLCGYG---EVGKGCCQSLKGLGCVIYIT 106 (542)
Q Consensus 34 ~~~L~~PV~~vn~s----~~K~~fd~~~g~~~s~~~ai~r~~~~~l~GktVvViG~G---~IG~~vA~~l~~~Ga~Viv~ 106 (542)
.....+||||.-+. ++-.+.|-. .+.+..+ .+.|.+|+++|-| ++....+..+..+|++|.++
T Consensus 110 a~~~~vPVINagdg~~~HPtQaLaDl~---------Ti~e~~g-~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~ 179 (304)
T 3r7f_A 110 VSQVNIPILNAGDGCGQHPTQSLLDLM---------TIYEEFN-TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFS 179 (304)
T ss_dssp HHHCSSCEEESCCTTSCCHHHHHHHHH---------HHHHHHS-CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHhCCCCEEeCCCCCCcCcHHHHHHHH---------HHHHHhC-CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEE
Confidence 34567899988543 333333321 2333322 4789999999986 58899999999999999998
Q ss_pred eCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCCC---------------cccCCHHHHhccCCCeEEEeccC
Q psy4626 107 EIDPICALQACMDGFSVVKLNEVIRTVDIVVTATGN---------------KNVVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 107 d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG~---------------~~lI~~e~l~~mk~GailvnvG~ 165 (542)
-+..... .....| ...+++++++++|||++.... .--++.+.++.+|+++++.-++.
T Consensus 180 ~P~~~~~-~~~~~g-~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mHclP 251 (304)
T 3r7f_A 180 GPSEWQD-EENTFG-TYVSMDEAVESSDVVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKRHAIIMHPAP 251 (304)
T ss_dssp SCGGGSC-TTCSSC-EECCHHHHHHHCSEEEECCCCTTTCCSSCCSTTHHHHHSBCHHHHTTSCTTCEEECCSC
T ss_pred CCCccCc-chhhcC-ccCCHHHHhCCCCEEEeccchhhccccchhHHHHhCCCccCHHHHhhcCCCCEEECCCC
Confidence 6433222 111223 356889999999999995320 12366777888899998887764
No 389
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=95.86 E-value=0.037 Score=60.64 Aligned_cols=122 Identities=18% Similarity=0.257 Sum_probs=87.9
Q ss_pred HhHHHHHHHHHHHHH---hhcCccccCcEEEEEcCChhHHHHHHHHHh----CCC-------EEEEEeCCch--------
Q psy4626 54 DNLYMCRESIIDSLK---RSTDVMFGGKQVVLCGYGEVGKGCCQSLKG----LGC-------VIYITEIDPI-------- 111 (542)
Q Consensus 54 d~~~g~~~s~~~ai~---r~~~~~l~GktVvViG~G~IG~~vA~~l~~----~Ga-------~Viv~d~dp~-------- 111 (542)
|...||+-.++.++. +.++..+...+++|.|+|.-|.++|..+.. .|+ +++++|..-.
T Consensus 294 DDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l 373 (605)
T 1o0s_A 294 DDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEM 373 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSC
T ss_pred cccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEECCCceeCCCCCc
Confidence 566788755555443 345677888999999999999999999987 895 6888886331
Q ss_pred ---hhhhhhcCCceeeCHHHHhc--CCcEEEEcCCCcccCCHHHHhccC---CCeEEEeccCCCc--ccChHhhc
Q psy4626 112 ---CALQACMDGFSVVKLNEVIR--TVDIVVTATGNKNVVTREHMDKMK---NGCVVCNMGHSNT--EIDVNSLR 176 (542)
Q Consensus 112 ---r~~~A~~~G~~v~~l~e~l~--~aDvVi~atG~~~lI~~e~l~~mk---~GailvnvG~g~~--eid~~aL~ 176 (542)
+...|.... ..-++.++++ ++|++|-+++.+++++++.++.|. +.-+|.-.+.... |+..+...
T Consensus 374 ~~~k~~~A~~~~-~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~~pe~a~ 447 (605)
T 1o0s_A 374 NPRHVQFAKDMP-ETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSNPTSKAECTAEEAY 447 (605)
T ss_dssp CGGGTTTCBSSC-CCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECCSSGGGCSSCHHHHH
T ss_pred hHHHHHHHhhcC-CCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCCCCcCcCHHHHH
Confidence 222222111 1346888887 599999999878999999999996 6777777776543 77766544
No 390
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=95.86 E-value=0.02 Score=57.08 Aligned_cols=38 Identities=16% Similarity=0.293 Sum_probs=34.0
Q ss_pred cccCcEEEEEcC-Ch--hHHHHHHHHHhCCCEEEEEeCCch
Q psy4626 74 MFGGKQVVLCGY-GE--VGKGCCQSLKGLGCVIYITEIDPI 111 (542)
Q Consensus 74 ~l~GktVvViG~-G~--IG~~vA~~l~~~Ga~Viv~d~dp~ 111 (542)
.+.||+++|.|. |. ||+.+|+.|...|++|+++++++.
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~ 68 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA 68 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 478999999998 45 999999999999999999998853
No 391
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=95.83 E-value=0.012 Score=60.31 Aligned_cols=83 Identities=14% Similarity=-0.016 Sum_probs=58.3
Q ss_pred cEEEEEcCChhHH-HHHHHHHhC-CCEEE-EEeCCchhhhh-hhcCCce-eeCHHHHhc--CCcEEEEcCCCcccCCHHH
Q psy4626 78 KQVVLCGYGEVGK-GCCQSLKGL-GCVIY-ITEIDPICALQ-ACMDGFS-VVKLNEVIR--TVDIVVTATGNKNVVTREH 150 (542)
Q Consensus 78 ktVvViG~G~IG~-~vA~~l~~~-Ga~Vi-v~d~dp~r~~~-A~~~G~~-v~~l~e~l~--~aDvVi~atG~~~lI~~e~ 150 (542)
.+++|||+|.+|. ..+..++.. |++|+ ++|+++.++.. +...|.. +.++++++. +.|+|+.|+.+..-. ...
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~-~~~ 106 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHA-EWI 106 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHH-HHH
T ss_pred eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHH-HHH
Confidence 5899999999998 688888877 77765 78999887654 3344654 467888884 689999997543222 233
Q ss_pred HhccCCCeEEE
Q psy4626 151 MDKMKNGCVVC 161 (542)
Q Consensus 151 l~~mk~Gailv 161 (542)
...++.|.-++
T Consensus 107 ~~al~aGk~Vl 117 (350)
T 3rc1_A 107 DRALRAGKHVL 117 (350)
T ss_dssp HHHHHTTCEEE
T ss_pred HHHHHCCCcEE
Confidence 45566665443
No 392
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=95.78 E-value=0.029 Score=54.95 Aligned_cols=36 Identities=22% Similarity=0.225 Sum_probs=33.1
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCC
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEID 109 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~d 109 (542)
.+.||+++|.|. |-||+.+|+.|...|++|++++++
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 468999999998 579999999999999999999986
No 393
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=95.78 E-value=0.017 Score=56.10 Aligned_cols=41 Identities=22% Similarity=0.335 Sum_probs=36.2
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhh
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICAL 114 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~ 114 (542)
.+.||+++|.|. |-||+.+++.|...|++|+++++++.+..
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~ 44 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQ 44 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 367999999998 68999999999999999999999886544
No 394
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.77 E-value=0.021 Score=58.73 Aligned_cols=90 Identities=16% Similarity=0.273 Sum_probs=61.7
Q ss_pred ccCcEEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhhh-hh--cCC--c----ee---eCHHHHhcCCcEEEEcC
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICALQ-AC--MDG--F----SV---VKLNEVIRTVDIVVTAT 140 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~~-A~--~~G--~----~v---~~l~e~l~~aDvVi~at 140 (542)
...++|+|+|+|.+|..+|..+...|. ++..+|+++.++.. +. .+. + .+ .+. +.+++||+||.+.
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~~aDiVvi~a 95 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTANSKLVIITA 95 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGTTEEEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhCCCCEEEEcc
Confidence 467899999999999999999988886 89999998765431 11 111 1 11 123 4689999999988
Q ss_pred CCcc--------cCC---------HHHHhccCCCeEEEeccC
Q psy4626 141 GNKN--------VVT---------REHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 141 G~~~--------lI~---------~e~l~~mk~GailvnvG~ 165 (542)
|.+. ++. .+.+....|.+++++++-
T Consensus 96 G~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 96 GARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp SCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 7432 111 123444568889988883
No 395
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=95.75 E-value=0.027 Score=55.58 Aligned_cols=69 Identities=16% Similarity=0.250 Sum_probs=48.8
Q ss_pred ccccCcEEEEEcCC-hhHHHHHHHHHhCCCEEEEEeCCchh--hhhhhcCCcee----eCH---H---HHh--cCCcEEE
Q psy4626 73 VMFGGKQVVLCGYG-EVGKGCCQSLKGLGCVIYITEIDPIC--ALQACMDGFSV----VKL---N---EVI--RTVDIVV 137 (542)
Q Consensus 73 ~~l~GktVvViG~G-~IG~~vA~~l~~~Ga~Viv~d~dp~r--~~~A~~~G~~v----~~l---~---e~l--~~aDvVi 137 (542)
..+.||+++|.|.+ -||+.+|+.|...|++|++++++... ..+....|..+ .++ + +++ ...|++|
T Consensus 5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLV 84 (247)
T 4hp8_A 5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILV 84 (247)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 35789999999996 59999999999999999999987642 12223344331 122 1 112 3689999
Q ss_pred EcCC
Q psy4626 138 TATG 141 (542)
Q Consensus 138 ~atG 141 (542)
.+.|
T Consensus 85 NNAG 88 (247)
T 4hp8_A 85 NNAG 88 (247)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9776
No 396
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=95.73 E-value=0.012 Score=59.93 Aligned_cols=80 Identities=14% Similarity=0.193 Sum_probs=56.1
Q ss_pred EEEEEcCChhHHHHHHHHHhC-CCE-EEEEeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcccCCHHHHhccC
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGL-GCV-IYITEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKNVVTREHMDKMK 155 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~-Ga~-Viv~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk 155 (542)
+|+|+|+|.+|+.+++.+... +++ |.++|+++.+ ..+ .|..+ .++++++.++|+|+.|+.+.... ......++
T Consensus 5 rV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~~~--~gv~~~~d~~~ll~~~DvViiatp~~~h~-~~~~~al~ 80 (320)
T 1f06_A 5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-DTK--TPVFDVADVDKHADDVDVLFLCMGSATDI-PEQAPKFA 80 (320)
T ss_dssp EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-SSS--SCEEEGGGGGGTTTTCSEEEECSCTTTHH-HHHHHHHT
T ss_pred EEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-hhc--CCCceeCCHHHHhcCCCEEEEcCCcHHHH-HHHHHHHH
Confidence 799999999999999998876 566 4578988655 212 34443 35566667899999998654222 24556677
Q ss_pred CCeEEEe
Q psy4626 156 NGCVVCN 162 (542)
Q Consensus 156 ~Gailvn 162 (542)
.|.-++.
T Consensus 81 aG~~Vv~ 87 (320)
T 1f06_A 81 QFACTVD 87 (320)
T ss_dssp TTSEEEC
T ss_pred CCCEEEE
Confidence 7776654
No 397
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.71 E-value=0.019 Score=54.00 Aligned_cols=64 Identities=23% Similarity=0.234 Sum_probs=48.8
Q ss_pred cEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee-----C---HHHHhcCCcEEEEcCCC
Q psy4626 78 KQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV-----K---LNEVIRTVDIVVTATGN 142 (542)
Q Consensus 78 ktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~-----~---l~e~l~~aDvVi~atG~ 142 (542)
++|+|+|. |.||+.+++.|...|.+|+++++++.+.... ..++.++ + +.++++++|+||.+.|.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-NEHLKVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 68999995 9999999999999999999999988654321 1333322 2 34567899999998764
No 398
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=95.71 E-value=0.082 Score=53.66 Aligned_cols=130 Identities=18% Similarity=0.227 Sum_probs=85.4
Q ss_pred hcccccceeecCch----hhhHHHHhHHHHHHHHHHHHHhhcCccccCcEEEEEcC---ChhHHHHHHHHHhC-CCEEEE
Q psy4626 34 AGKLTVPAMNVNDS----VTKTKFDNLYMCRESIIDSLKRSTDVMFGGKQVVLCGY---GEVGKGCCQSLKGL-GCVIYI 105 (542)
Q Consensus 34 ~~~L~~PV~~vn~s----~~K~~fd~~~g~~~s~~~ai~r~~~~~l~GktVvViG~---G~IG~~vA~~l~~~-Ga~Viv 105 (542)
.....+||||.-++ ++-.+.|-. .+++..+ .+.|.+|+++|- |++....+..+..+ |++|.+
T Consensus 112 a~~~~vPVINaG~g~~~HPtQ~LaDl~---------Ti~e~~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~ 181 (299)
T 1pg5_A 112 SEISDIPVINAGDGKHEHPTQAVIDIY---------TINKHFN-TIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYL 181 (299)
T ss_dssp HHHCSSCEEEEEETTTBCHHHHHHHHH---------HHHHHHS-CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEE
T ss_pred HHhCCCCEEeCCCCCCcCcHHHHHHHH---------HHHHHhC-CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEE
Confidence 33556899988443 333333321 2332222 478999999998 58999999999999 999999
Q ss_pred EeCCchhhhh--hhcCCce---eeCHHHHhcCCcEEEEcCCC---------------cccCCHHHHhccCCCeEEEeccC
Q psy4626 106 TEIDPICALQ--ACMDGFS---VVKLNEVIRTVDIVVTATGN---------------KNVVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 106 ~d~dp~r~~~--A~~~G~~---v~~l~e~l~~aDvVi~atG~---------------~~lI~~e~l~~mk~GailvnvG~ 165 (542)
+-+....... +...|.. ..+++++++++|+|.+..-. ..-++.+.++.+|+++++.-++-
T Consensus 182 ~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lP 261 (299)
T 1pg5_A 182 ISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPLP 261 (299)
T ss_dssp ECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCSC
T ss_pred ECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccccccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCCC
Confidence 8643322211 2344543 24688999999999995321 34567778888889988887775
Q ss_pred CCcccChH
Q psy4626 166 SNTEIDVN 173 (542)
Q Consensus 166 g~~eid~~ 173 (542)
-..||+-+
T Consensus 262 rg~EI~~e 269 (299)
T 1pg5_A 262 RVNEIDRK 269 (299)
T ss_dssp CSSSBCGG
T ss_pred CCCccCHH
Confidence 34444433
No 399
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=95.70 E-value=0.024 Score=57.39 Aligned_cols=64 Identities=16% Similarity=0.225 Sum_probs=47.3
Q ss_pred EEEEEcCChhHHHHHHHHHh--CCCEEEEEeCCchhhhhhh---cCC---------cee-eCHHHHhcCCcEEEEcCCCc
Q psy4626 79 QVVLCGYGEVGKGCCQSLKG--LGCVIYITEIDPICALQAC---MDG---------FSV-VKLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~--~Ga~Viv~d~dp~r~~~A~---~~G---------~~v-~~l~e~l~~aDvVi~atG~~ 143 (542)
+|+|+|.|.+|..+|..+.. +|.+|+++|+++.+..... ..+ ... .+.++ ++++|+||.+.|++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~p 80 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGLP 80 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSCC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCCC
Confidence 79999999999999999986 4789999999987654211 111 112 34444 88999999998754
No 400
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=95.67 E-value=0.03 Score=53.59 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=35.9
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhh
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICAL 114 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~ 114 (542)
.+.|++++|+|. |.||+.+++.|...|++|+++++++.+..
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~ 44 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGE 44 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 357999999997 78999999999999999999999876543
No 401
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=95.66 E-value=0.018 Score=59.35 Aligned_cols=82 Identities=21% Similarity=0.270 Sum_probs=56.4
Q ss_pred cEEEEEcCChhHHH-HHHHHHhC-CCEEE-EEeCCchhhhhhhcCCce-eeCHHHHhc--CCcEEEEcCCCcccCCHHHH
Q psy4626 78 KQVVLCGYGEVGKG-CCQSLKGL-GCVIY-ITEIDPICALQACMDGFS-VVKLNEVIR--TVDIVVTATGNKNVVTREHM 151 (542)
Q Consensus 78 ktVvViG~G~IG~~-vA~~l~~~-Ga~Vi-v~d~dp~r~~~A~~~G~~-v~~l~e~l~--~aDvVi~atG~~~lI~~e~l 151 (542)
-+|+|||+|.+|+. .+..++.. +++|+ ++|+++.++. +...+.. +.++++++. +.|+|+.||.+..-. ....
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~-~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~-~~~~ 85 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVK-RDLPDVTVIASPEAAVQHPDVDLVVIASPNATHA-PLAR 85 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH-HHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHH-HHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH-hhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHH-HHHH
Confidence 47999999999986 67777765 77765 7899987654 2233444 457888885 799999997542211 2345
Q ss_pred hccCCCeEEE
Q psy4626 152 DKMKNGCVVC 161 (542)
Q Consensus 152 ~~mk~Gailv 161 (542)
..++.|.-++
T Consensus 86 ~al~aGk~Vl 95 (364)
T 3e82_A 86 LALNAGKHVV 95 (364)
T ss_dssp HHHHTTCEEE
T ss_pred HHHHCCCcEE
Confidence 5566666554
No 402
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=95.66 E-value=0.018 Score=56.63 Aligned_cols=37 Identities=22% Similarity=0.323 Sum_probs=33.9
Q ss_pred ccCcEEEEEcC---ChhHHHHHHHHHhCCCEEEEEeCCch
Q psy4626 75 FGGKQVVLCGY---GEVGKGCCQSLKGLGCVIYITEIDPI 111 (542)
Q Consensus 75 l~GktVvViG~---G~IG~~vA~~l~~~Ga~Viv~d~dp~ 111 (542)
+.||+++|.|. |-||+.+|+.|...|++|+++++++.
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES 43 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 57999999998 58999999999999999999998874
No 403
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=95.66 E-value=0.03 Score=54.99 Aligned_cols=69 Identities=17% Similarity=0.258 Sum_probs=49.7
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh-cCC--ce-----eeCH---HHHh-------cCCc
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQAC-MDG--FS-----VVKL---NEVI-------RTVD 134 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~-~~G--~~-----v~~l---~e~l-------~~aD 134 (542)
.+.||+++|.|. |-||+.+|+.|...|++|+++++++.+..+.. ..+ .. +.+. ++++ ...|
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 87 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLD 87 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999998 67999999999999999999999886654321 112 11 1222 2222 3789
Q ss_pred EEEEcCCC
Q psy4626 135 IVVTATGN 142 (542)
Q Consensus 135 vVi~atG~ 142 (542)
++|.+.|.
T Consensus 88 ~lv~nAg~ 95 (271)
T 3tzq_B 88 IVDNNAAH 95 (271)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998764
No 404
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=95.66 E-value=0.12 Score=52.69 Aligned_cols=100 Identities=15% Similarity=0.144 Sum_probs=72.4
Q ss_pred cccCcEEEEEcCC--hhHHHHHHHHHhCCCEEEEEeCCchhh-----hh----hhcCCce---eeCHHHHhcCCcEEEEc
Q psy4626 74 MFGGKQVVLCGYG--EVGKGCCQSLKGLGCVIYITEIDPICA-----LQ----ACMDGFS---VVKLNEVIRTVDIVVTA 139 (542)
Q Consensus 74 ~l~GktVvViG~G--~IG~~vA~~l~~~Ga~Viv~d~dp~r~-----~~----A~~~G~~---v~~l~e~l~~aDvVi~a 139 (542)
.+.|.+|+++|-| ++....+..+..+|++|.++-+..... .. |...|.. +.+++++++++|+|.+.
T Consensus 145 ~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~ 224 (307)
T 2i6u_A 145 ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTD 224 (307)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEec
Confidence 4789999999996 899999999999999999985432211 11 2244532 35688999999999994
Q ss_pred C----C------------CcccCCHHHHhccCCCeEEEeccCC--CcccChH
Q psy4626 140 T----G------------NKNVVTREHMDKMKNGCVVCNMGHS--NTEIDVN 173 (542)
Q Consensus 140 t----G------------~~~lI~~e~l~~mk~GailvnvG~g--~~eid~~ 173 (542)
. | ...-++.+.++.+|+++++.-++-. ..||+-+
T Consensus 225 ~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~e 276 (307)
T 2i6u_A 225 TWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCLPAHRGDEITDA 276 (307)
T ss_dssp CSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHH
T ss_pred ceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCCCCCCCcccCHh
Confidence 3 2 1244677888889999999887754 3455544
No 405
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=95.66 E-value=0.011 Score=60.18 Aligned_cols=82 Identities=15% Similarity=0.059 Sum_probs=58.3
Q ss_pred cEEEEEcCChhHHHHHHHHHhC-CCEEE-EEeCCchhhhh-hhcCCce--eeCHHHHhc--CCcEEEEcCCCcccCCHHH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGL-GCVIY-ITEIDPICALQ-ACMDGFS--VVKLNEVIR--TVDIVVTATGNKNVVTREH 150 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~-Ga~Vi-v~d~dp~r~~~-A~~~G~~--v~~l~e~l~--~aDvVi~atG~~~lI~~e~ 150 (542)
.+++|||+|.+|...+..++.. +++|+ ++|+++.++.. +...|.. +.++++++. ++|+|+.|+.+..-. ...
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~-~~~ 84 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHY-SAA 84 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHH-HHH
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHH-HHH
Confidence 4899999999999999999875 67766 68999887654 3444652 457888885 899999997653222 233
Q ss_pred HhccCCCeEE
Q psy4626 151 MDKMKNGCVV 160 (542)
Q Consensus 151 l~~mk~Gail 160 (542)
...++.|.-+
T Consensus 85 ~~al~~gk~v 94 (330)
T 3e9m_A 85 KLALSQGKPV 94 (330)
T ss_dssp HHHHHTTCCE
T ss_pred HHHHHCCCeE
Confidence 4456666533
No 406
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=95.65 E-value=0.03 Score=55.42 Aligned_cols=69 Identities=25% Similarity=0.351 Sum_probs=49.2
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc-CC--ce-----eeCHH---HH-------hcCCc
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACM-DG--FS-----VVKLN---EV-------IRTVD 134 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~-~G--~~-----v~~l~---e~-------l~~aD 134 (542)
.+.||+++|.|. |-||+.+|+.|...|++|+++++++.+..+... .+ +. +.+.+ ++ +...|
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVD 105 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 478999999997 579999999999999999999998876543221 12 11 12222 22 24789
Q ss_pred EEEEcCCC
Q psy4626 135 IVVTATGN 142 (542)
Q Consensus 135 vVi~atG~ 142 (542)
++|.+.|.
T Consensus 106 ~lvnnAg~ 113 (277)
T 3gvc_A 106 KLVANAGV 113 (277)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998763
No 407
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=95.65 E-value=0.053 Score=53.41 Aligned_cols=38 Identities=18% Similarity=0.348 Sum_probs=33.6
Q ss_pred ccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCc
Q psy4626 73 VMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDP 110 (542)
Q Consensus 73 ~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp 110 (542)
..+.||+++|.|. |-||+.+|+.|...|++|++++.++
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~ 65 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNA 65 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3578999999998 5799999999999999999987655
No 408
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=95.65 E-value=0.041 Score=59.34 Aligned_cols=95 Identities=17% Similarity=0.153 Sum_probs=61.6
Q ss_pred chhhhHHHHhHHHHHHHHHHHHHhhcCcccc-CcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee
Q psy4626 46 DSVTKTKFDNLYMCRESIIDSLKRSTDVMFG-GKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV 123 (542)
Q Consensus 46 ~s~~K~~fd~~~g~~~s~~~ai~r~~~~~l~-GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v 123 (542)
...++..|..+.......+....+....... +++|+|+|. |.||+.+++.|...|.+|+++++++.+.....-+. .
T Consensus 115 ~~~L~~~f~~R~~~l~~~l~~~~~~~~~~~~k~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~--~ 192 (516)
T 3oh8_A 115 ASTLTGMFAYRQTQLIEDLKFLSRTSTLFDGSPLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDP--L 192 (516)
T ss_dssp GGGTHHHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCT--T
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecc--c
Confidence 5567777766654443333332222222234 789999995 99999999999999999999998876432100000 0
Q ss_pred eCHHHHhcCCcEEEEcCCC
Q psy4626 124 VKLNEVIRTVDIVVTATGN 142 (542)
Q Consensus 124 ~~l~e~l~~aDvVi~atG~ 142 (542)
....+++.++|+||.+.|.
T Consensus 193 ~~~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 193 NPASDLLDGADVLVHLAGE 211 (516)
T ss_dssp SCCTTTTTTCSEEEECCCC
T ss_pred chhHHhcCCCCEEEECCCC
Confidence 1224567899999998764
No 409
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=95.65 E-value=0.025 Score=55.45 Aligned_cols=69 Identities=14% Similarity=0.157 Sum_probs=47.0
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCH---HHHh-------cCCcEEEEcCCC
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKL---NEVI-------RTVDIVVTATGN 142 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l---~e~l-------~~aDvVi~atG~ 142 (542)
.+.||+++|.|. |-||+.+++.|...|++|+++++++.+.........++.+. ++++ ...|++|.+.|.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~ 84 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI 84 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 367999999997 68999999999999999999998765311000000112222 2222 379999998763
No 410
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=95.62 E-value=0.009 Score=60.94 Aligned_cols=84 Identities=18% Similarity=0.190 Sum_probs=56.5
Q ss_pred cEEEEEcCChhHHHHHHHHH--hCCCE-EEEEeCCchh-h-hhhhcCCcee--eCHHHHh-----cCCcEEEEcCCCccc
Q psy4626 78 KQVVLCGYGEVGKGCCQSLK--GLGCV-IYITEIDPIC-A-LQACMDGFSV--VKLNEVI-----RTVDIVVTATGNKNV 145 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~--~~Ga~-Viv~d~dp~r-~-~~A~~~G~~v--~~l~e~l-----~~aDvVi~atG~~~l 145 (542)
-+|+|+|+|++|+..++.+. .-+++ +.++|++|.+ . ..+...|... .+.++++ .+.|+|++|+++..-
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~~~h 84 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSASAH 84 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCChHHH
Confidence 48999999999999999884 35675 5568998876 3 3345566643 3445654 468999999984321
Q ss_pred CCHHHHhccCC--CeEEEe
Q psy4626 146 VTREHMDKMKN--GCVVCN 162 (542)
Q Consensus 146 I~~e~l~~mk~--Gailvn 162 (542)
. .-....++. |..++.
T Consensus 85 ~-~~a~~al~a~~Gk~Vi~ 102 (312)
T 1nvm_B 85 V-QNEALLRQAKPGIRLID 102 (312)
T ss_dssp H-HHHHHHHHHCTTCEEEE
T ss_pred H-HHHHHHHHhCCCCEEEE
Confidence 1 223444555 887775
No 411
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.62 E-value=0.01 Score=58.45 Aligned_cols=37 Identities=24% Similarity=0.419 Sum_probs=33.7
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCc
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDP 110 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp 110 (542)
.+.+++|+|+|+|.+|..++..|...|+ +++++|.|.
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4678899999999999999999999998 899998775
No 412
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=95.60 E-value=0.024 Score=50.84 Aligned_cols=87 Identities=16% Similarity=0.198 Sum_probs=58.8
Q ss_pred cccCcEEEEEcC----ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee-CHHHHhcCCcEEEEcCCCcccCC-
Q psy4626 74 MFGGKQVVLCGY----GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV-KLNEVIRTVDIVVTATGNKNVVT- 147 (542)
Q Consensus 74 ~l~GktVvViG~----G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~-~l~e~l~~aDvVi~atG~~~lI~- 147 (542)
...-++|+|+|. |.+|..+++.++..|.+|+.++ |.+. .-.|..+. ++.++...+|+++.++.......
T Consensus 11 l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vn--p~~~---~i~G~~~~~s~~el~~~vDlvii~vp~~~v~~v 85 (138)
T 1y81_A 11 SKEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVN--PNYD---EIEGLKCYRSVRELPKDVDVIVFVVPPKVGLQV 85 (138)
T ss_dssp ---CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC--TTCS---EETTEECBSSGGGSCTTCCEEEECSCHHHHHHH
T ss_pred ccCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeC--CCCC---eECCeeecCCHHHhCCCCCEEEEEeCHHHHHHH
Confidence 345679999999 9999999999999999855554 5431 22576654 67787788999999876322211
Q ss_pred -HHHHhccCCCeEEEeccCC
Q psy4626 148 -REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 148 -~e~l~~mk~GailvnvG~g 166 (542)
.+..+ ...+++++..+..
T Consensus 86 ~~~~~~-~g~~~i~~~~~~~ 104 (138)
T 1y81_A 86 AKEAVE-AGFKKLWFQPGAE 104 (138)
T ss_dssp HHHHHH-TTCCEEEECTTSC
T ss_pred HHHHHH-cCCCEEEEcCccH
Confidence 12233 5567777777654
No 413
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=95.60 E-value=0.014 Score=56.81 Aligned_cols=38 Identities=18% Similarity=0.273 Sum_probs=34.3
Q ss_pred cccCcEEEEEcC---ChhHHHHHHHHHhCCCEEEEEeCCch
Q psy4626 74 MFGGKQVVLCGY---GEVGKGCCQSLKGLGCVIYITEIDPI 111 (542)
Q Consensus 74 ~l~GktVvViG~---G~IG~~vA~~l~~~Ga~Viv~d~dp~ 111 (542)
.+.||+++|.|. |-||+.+++.|...|++|+++++++.
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~ 45 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER 45 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 467999999998 58999999999999999999998874
No 414
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=95.59 E-value=0.016 Score=58.85 Aligned_cols=83 Identities=13% Similarity=0.101 Sum_probs=57.0
Q ss_pred cEEEEEcCChhHHHHHHHHHhC-CCEEE-EEeCCchhhhh-hhcCCce--eeCHHHHhc--CCcEEEEcCCCcccCCHHH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGL-GCVIY-ITEIDPICALQ-ACMDGFS--VVKLNEVIR--TVDIVVTATGNKNVVTREH 150 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~-Ga~Vi-v~d~dp~r~~~-A~~~G~~--v~~l~e~l~--~aDvVi~atG~~~lI~~e~ 150 (542)
.+++|||+|.||...+..++.. +++++ ++|+++.++.. +...|.. +.++++++. ++|+|+.|+.+..-. ...
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~-~~~ 84 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHY-KVA 84 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHH-HHH
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHH-HHH
Confidence 4899999999999988888765 56655 67999887653 3344553 457888886 799999997643222 234
Q ss_pred HhccCCCeEEE
Q psy4626 151 MDKMKNGCVVC 161 (542)
Q Consensus 151 l~~mk~Gailv 161 (542)
...++.|.-++
T Consensus 85 ~~al~aGk~Vl 95 (329)
T 3evn_A 85 KAALLAGKHVL 95 (329)
T ss_dssp HHHHHTTCEEE
T ss_pred HHHHHCCCeEE
Confidence 55566665444
No 415
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=95.56 E-value=0.02 Score=58.40 Aligned_cols=82 Identities=16% Similarity=0.194 Sum_probs=57.8
Q ss_pred EEEEEcCChhHHHHHHHHH-h-CCCEEE-EEeCCchhhhh-hhcCC--ce-eeCHHHHhc--CCcEEEEcCCCcccCCHH
Q psy4626 79 QVVLCGYGEVGKGCCQSLK-G-LGCVIY-ITEIDPICALQ-ACMDG--FS-VVKLNEVIR--TVDIVVTATGNKNVVTRE 149 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~-~-~Ga~Vi-v~d~dp~r~~~-A~~~G--~~-v~~l~e~l~--~aDvVi~atG~~~lI~~e 149 (542)
+|+|||+|.+|...+..++ . -+++++ ++|+++.++.. +...| .. +.++++++. ++|+|+.|+.+..-. ..
T Consensus 4 rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~-~~ 82 (344)
T 3mz0_A 4 RIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHE-SS 82 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGHH-HH
T ss_pred EEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhHH-HH
Confidence 7999999999999999888 4 467765 78999887654 34456 33 457888885 499999998543222 23
Q ss_pred HHhccCCCeEEE
Q psy4626 150 HMDKMKNGCVVC 161 (542)
Q Consensus 150 ~l~~mk~Gailv 161 (542)
....++.|.-++
T Consensus 83 ~~~al~~Gk~vl 94 (344)
T 3mz0_A 83 VLKAIKAQKYVF 94 (344)
T ss_dssp HHHHHHTTCEEE
T ss_pred HHHHHHCCCcEE
Confidence 455566666444
No 416
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=95.55 E-value=0.029 Score=55.25 Aligned_cols=39 Identities=18% Similarity=0.359 Sum_probs=34.5
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchh
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPIC 112 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r 112 (542)
.+.||+++|.|. |-||+.+|+.|...|++|+++++++.+
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 65 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTE 65 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 367999999997 679999999999999999999988653
No 417
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.54 E-value=0.011 Score=60.20 Aligned_cols=83 Identities=18% Similarity=0.358 Sum_probs=58.5
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeC--------HHHH-hcCCcEEEEcCCCc--cc
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVK--------LNEV-IRTVDIVVTATGNK--NV 145 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~--------l~e~-l~~aDvVi~atG~~--~l 145 (542)
.+.++|+|+|.+|+.+++.|...|. |+++|.||.+.. ....|+.++. ++++ +.++|.++.++++. .+
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~n~ 192 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETI 192 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHHHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHHHH
Confidence 4589999999999999999999999 999999998876 5556666432 2233 57899999988753 11
Q ss_pred CCHHHHhccCCCeEEE
Q psy4626 146 VTREHMDKMKNGCVVC 161 (542)
Q Consensus 146 I~~e~l~~mk~Gailv 161 (542)
......+.+.+...++
T Consensus 193 ~~~~~ar~~~~~~~ii 208 (336)
T 1lnq_A 193 HCILGIRKIDESVRII 208 (336)
T ss_dssp HHHHHHHTTCTTSEEE
T ss_pred HHHHHHHHHCCCCeEE
Confidence 2123445555554443
No 418
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=95.54 E-value=0.022 Score=56.49 Aligned_cols=42 Identities=26% Similarity=0.268 Sum_probs=33.6
Q ss_pred ccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhh
Q psy4626 73 VMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICAL 114 (542)
Q Consensus 73 ~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~ 114 (542)
..+.||+++|.|. |-||+.+|+.|...|++|+++++++.+..
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~ 71 (281)
T 4dry_A 29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLD 71 (281)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 3578999999997 67999999999999999999999886543
No 419
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=95.54 E-value=0.025 Score=58.35 Aligned_cols=86 Identities=16% Similarity=0.248 Sum_probs=60.3
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCc----eeeC---HHHHhcCCcEEEEcCCCcccCCHH
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGF----SVVK---LNEVIRTVDIVVTATGNKNVVTRE 149 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~----~v~~---l~e~l~~aDvVi~atG~~~lI~~e 149 (542)
..+|+|+|+|.+|+.+++.|.. ..+|.++|+++.++..+....- ++.+ +.++++++|+||.|++.. .+..
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~--~~~~ 92 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF--LGFK 92 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG--GHHH
T ss_pred ccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc--ccch
Confidence 3479999999999999999964 5799999999877665433221 1222 345678999999997642 3323
Q ss_pred HH-hccCCCeEEEeccC
Q psy4626 150 HM-DKMKNGCVVCNMGH 165 (542)
Q Consensus 150 ~l-~~mk~GailvnvG~ 165 (542)
.. ..++.|.-+++++-
T Consensus 93 v~~~~~~~g~~yvD~s~ 109 (365)
T 3abi_A 93 SIKAAIKSKVDMVDVSF 109 (365)
T ss_dssp HHHHHHHHTCEEEECCC
T ss_pred HHHHHHhcCcceEeeec
Confidence 32 34577888888763
No 420
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.54 E-value=0.0094 Score=54.68 Aligned_cols=32 Identities=19% Similarity=0.335 Sum_probs=30.0
Q ss_pred EEEEEcCChhHHHHHHHHHhCCCEEEEEeCCc
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGCVIYITEIDP 110 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp 110 (542)
.|+|||+||.|+.+|..|+..|.+|+++|.++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 49999999999999999999999999999765
No 421
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=95.51 E-value=0.02 Score=54.33 Aligned_cols=83 Identities=13% Similarity=0.169 Sum_probs=57.5
Q ss_pred ccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCH---HHH---hcCCcEEEEcCCCcc---
Q psy4626 75 FGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKL---NEV---IRTVDIVVTATGNKN--- 144 (542)
Q Consensus 75 l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l---~e~---l~~aDvVi~atG~~~--- 144 (542)
+.||+++|.|. |-||+.+|+.|...|++|+++++++. .++.+. +++ +...|++|.+.|...
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~ 74 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------LDISDEKSVYHYFETIGAFDHLIVTAGSYAPAG 74 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------CCTTCHHHHHHHHHHHCSEEEEEECCCCCCCCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------cCCCCHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 56899999998 67999999999999999999986543 222222 222 357899999877321
Q ss_pred -c--CC-------------------HHHHhccCCCeEEEeccCC
Q psy4626 145 -V--VT-------------------REHMDKMKNGCVVCNMGHS 166 (542)
Q Consensus 145 -l--I~-------------------~e~l~~mk~GailvnvG~g 166 (542)
+ .+ ...+..|++++.++++++.
T Consensus 75 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~ 118 (223)
T 3uce_A 75 KVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM 118 (223)
T ss_dssp CTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred CcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence 1 11 2234566677888888764
No 422
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=95.51 E-value=0.021 Score=55.95 Aligned_cols=41 Identities=12% Similarity=0.293 Sum_probs=36.3
Q ss_pred ccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhh
Q psy4626 75 FGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQ 115 (542)
Q Consensus 75 l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~ 115 (542)
+.|++++|.|. |-||+.+++.|...|++|+++++++.+..+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~ 45 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAE 45 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 57899999998 689999999999999999999998876543
No 423
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=95.50 E-value=0.031 Score=54.49 Aligned_cols=40 Identities=18% Similarity=0.317 Sum_probs=35.7
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhh
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICA 113 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~ 113 (542)
++.|++++|.|. |.||+.+++.|...|++|+++++++.+.
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 44 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAG 44 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 467999999998 6899999999999999999999987654
No 424
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.50 E-value=0.04 Score=52.19 Aligned_cols=66 Identities=18% Similarity=0.110 Sum_probs=48.0
Q ss_pred cCcEEEEEcC-ChhHHHHHHHHHhC--CCEEEEEeCCchhhhhhhcCCcee-----eC---HHHHhcCCcEEEEcCCC
Q psy4626 76 GGKQVVLCGY-GEVGKGCCQSLKGL--GCVIYITEIDPICALQACMDGFSV-----VK---LNEVIRTVDIVVTATGN 142 (542)
Q Consensus 76 ~GktVvViG~-G~IG~~vA~~l~~~--Ga~Viv~d~dp~r~~~A~~~G~~v-----~~---l~e~l~~aDvVi~atG~ 142 (542)
.+++|+|+|. |.||+.+++.|... |.+|+++++++.+.... ..+..+ .+ ++++++++|+||.+.|.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 5789999995 99999999999998 89999999987654322 122221 12 23456788888887663
No 425
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.50 E-value=0.038 Score=56.26 Aligned_cols=88 Identities=20% Similarity=0.166 Sum_probs=59.6
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhhh-hhc--C-------Ccee-eCHHHHhcCCcEEEEcCCCc
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICALQ-ACM--D-------GFSV-VKLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~~-A~~--~-------G~~v-~~l~e~l~~aDvVi~atG~~ 143 (542)
..+|+|+|.|.+|..++..+...|. +|..+|+++.++.. +.. . ...+ .+..+++++||+||.+.|.+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~~ 85 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGAA 85 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCCC
Confidence 4689999999999999998887774 89999999865431 111 1 1111 13456789999999988754
Q ss_pred ccCC-----------------HHHHhccCCCeEEEecc
Q psy4626 144 NVVT-----------------REHMDKMKNGCVVCNMG 164 (542)
Q Consensus 144 ~lI~-----------------~e~l~~mk~GailvnvG 164 (542)
.--. .+.+....+++++++++
T Consensus 86 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (317)
T 3d0o_A 86 QKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT 123 (317)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 2110 12333446888888865
No 426
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.49 E-value=0.031 Score=56.63 Aligned_cols=65 Identities=18% Similarity=0.199 Sum_probs=48.6
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCchhhhh-hh--cCC---------cee-eCHHHHhcCCcEEEEcCCCc
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDPICALQ-AC--MDG---------FSV-VKLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp~r~~~-A~--~~G---------~~v-~~l~e~l~~aDvVi~atG~~ 143 (542)
.+|+|+|.|.+|..++..+...|. +|..+|+++.++.. +. ..+ ... .+. +++++||+||.+.|.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAP 81 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 489999999999999999999896 99999999865431 11 111 112 344 6789999999998764
No 427
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=95.49 E-value=0.15 Score=52.07 Aligned_cols=100 Identities=16% Similarity=0.193 Sum_probs=72.7
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhh-----h----hhhcCCce---eeCHHHHhcCCcEEEEcC
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICA-----L----QACMDGFS---VVKLNEVIRTVDIVVTAT 140 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~-----~----~A~~~G~~---v~~l~e~l~~aDvVi~at 140 (542)
.+.|.+|+++|- +++....+..+..+|++|.++-+..... . .|...|.. +.+++++++++|+|.+..
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~ 231 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV 231 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcc
Confidence 478999999998 6888999999999999999985432211 1 12244533 356889999999999943
Q ss_pred ----C------------CcccCCHHHHhccCCCeEEEeccCC--CcccChH
Q psy4626 141 ----G------------NKNVVTREHMDKMKNGCVVCNMGHS--NTEIDVN 173 (542)
Q Consensus 141 ----G------------~~~lI~~e~l~~mk~GailvnvG~g--~~eid~~ 173 (542)
| ...-++.+.++.+|+++++.-++-. ..||+-+
T Consensus 232 w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~lP~~Rg~EI~~e 282 (315)
T 1pvv_A 232 WASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTDD 282 (315)
T ss_dssp CCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCHH
T ss_pred eeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCCCCCCCCccCHH
Confidence 2 1245678888889999999887764 3565544
No 428
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=95.48 E-value=0.033 Score=54.99 Aligned_cols=37 Identities=22% Similarity=0.390 Sum_probs=34.0
Q ss_pred ccCcEEEEEcC---ChhHHHHHHHHHhCCCEEEEEeCCch
Q psy4626 75 FGGKQVVLCGY---GEVGKGCCQSLKGLGCVIYITEIDPI 111 (542)
Q Consensus 75 l~GktVvViG~---G~IG~~vA~~l~~~Ga~Viv~d~dp~ 111 (542)
+.||+++|.|. |-||+.+|+.|...|++|+++++++.
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~ 58 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK 58 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 67999999998 58999999999999999999998874
No 429
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=95.47 E-value=0.035 Score=52.89 Aligned_cols=88 Identities=10% Similarity=-0.002 Sum_probs=62.3
Q ss_pred ccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhc----CCc----eee--CHHHHh---cCCcEEEEcCC
Q psy4626 75 FGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACM----DGF----SVV--KLNEVI---RTVDIVVTATG 141 (542)
Q Consensus 75 l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~----~G~----~v~--~l~e~l---~~aDvVi~atG 141 (542)
..|++|+.+|+| .|......++. +.+|+.+|.++.....|.. .+. .+. +..+.. ...|+|+.+.+
T Consensus 90 ~~~~~vldiG~G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 167 (248)
T 2yvl_A 90 NKEKRVLEFGTG-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVR 167 (248)
T ss_dssp CTTCEEEEECCT-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECSS
T ss_pred CCCCEEEEeCCC-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECCc
Confidence 478999999999 68877777777 8899999999987655433 232 221 222222 35899999877
Q ss_pred Cc-ccCCHHHHhccCCCeEEEeccC
Q psy4626 142 NK-NVVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 142 ~~-~lI~~e~l~~mk~GailvnvG~ 165 (542)
.+ ..+ .+..+.|++|+.++....
T Consensus 168 ~~~~~l-~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 168 EPWHYL-EKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp CGGGGH-HHHHHHBCTTCEEEEEES
T ss_pred CHHHHH-HHHHHHcCCCCEEEEEeC
Confidence 65 444 467888999998876554
No 430
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=95.45 E-value=0.018 Score=57.91 Aligned_cols=83 Identities=13% Similarity=0.115 Sum_probs=56.0
Q ss_pred cEEEEEcCChhHHH-HHHHHHh-CCCEEE-EEeCCchhhhh-hhcCCcee-eCHHHHhcCCcEEEEcCCCcccCCHHHHh
Q psy4626 78 KQVVLCGYGEVGKG-CCQSLKG-LGCVIY-ITEIDPICALQ-ACMDGFSV-VKLNEVIRTVDIVVTATGNKNVVTREHMD 152 (542)
Q Consensus 78 ktVvViG~G~IG~~-vA~~l~~-~Ga~Vi-v~d~dp~r~~~-A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~~e~l~ 152 (542)
.+|+|+|+|.+|+. .+..++. -|++++ ++|+++.++.. +...|..+ .+.+++..++|+|+.|+.+..-. .....
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~-~~~~~ 84 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHF-DVVST 84 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHH-HHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHH-HHHHH
Confidence 48999999999986 8887765 467766 89999987653 33335443 34555557899999998643222 23445
Q ss_pred ccCCCeEEE
Q psy4626 153 KMKNGCVVC 161 (542)
Q Consensus 153 ~mk~Gailv 161 (542)
.++.|.-++
T Consensus 85 al~~G~~v~ 93 (319)
T 1tlt_A 85 LLNAGVHVC 93 (319)
T ss_dssp HHHTTCEEE
T ss_pred HHHcCCeEE
Confidence 667776433
No 431
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.45 E-value=0.045 Score=55.00 Aligned_cols=68 Identities=19% Similarity=0.217 Sum_probs=49.1
Q ss_pred ccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhh----hhc-------CCceee--C------HHHHhcCCc
Q psy4626 75 FGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQ----ACM-------DGFSVV--K------LNEVIRTVD 134 (542)
Q Consensus 75 l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~----A~~-------~G~~v~--~------l~e~l~~aD 134 (542)
..+++|+|+|. |.||+.+++.|...|.+|+++++++..... ... .++.++ + +.++++++|
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 102 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD 102 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence 56899999996 999999999999999999999986542211 111 233322 2 235567899
Q ss_pred EEEEcCCC
Q psy4626 135 IVVTATGN 142 (542)
Q Consensus 135 vVi~atG~ 142 (542)
+||.+.|.
T Consensus 103 ~Vih~A~~ 110 (351)
T 3ruf_A 103 HVLHQAAL 110 (351)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99998763
No 432
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=95.43 E-value=0.15 Score=52.28 Aligned_cols=100 Identities=16% Similarity=0.130 Sum_probs=72.4
Q ss_pred cccCcEEEEEcCC--hhHHHHHHHHHhCCCEEEEEeCCchhh-----h----hhhcCCce---eeCHHHHhcCCcEEEEc
Q psy4626 74 MFGGKQVVLCGYG--EVGKGCCQSLKGLGCVIYITEIDPICA-----L----QACMDGFS---VVKLNEVIRTVDIVVTA 139 (542)
Q Consensus 74 ~l~GktVvViG~G--~IG~~vA~~l~~~Ga~Viv~d~dp~r~-----~----~A~~~G~~---v~~l~e~l~~aDvVi~a 139 (542)
.+.|.+|+++|-| ++....+..+..+|++|.++-+..... . .|...|.. +.+++++++++|+|.+.
T Consensus 164 ~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~ 243 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTD 243 (325)
T ss_dssp CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEec
Confidence 4789999999995 899999999999999999985432211 1 12244633 34688999999999994
Q ss_pred CC----------------CcccCCHHHHhcc-CCCeEEEeccCC--CcccChH
Q psy4626 140 TG----------------NKNVVTREHMDKM-KNGCVVCNMGHS--NTEIDVN 173 (542)
Q Consensus 140 tG----------------~~~lI~~e~l~~m-k~GailvnvG~g--~~eid~~ 173 (542)
.- .+.-++.+.++.+ |+++++.-++-. ..||+-+
T Consensus 244 ~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~LP~~Rg~EI~~e 296 (325)
T 1vlv_A 244 VWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTYE 296 (325)
T ss_dssp CCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBCHH
T ss_pred cccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCCCCCCCcccCHH
Confidence 31 1345677888889 999999887764 3455544
No 433
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=95.42 E-value=0.036 Score=55.36 Aligned_cols=40 Identities=23% Similarity=0.339 Sum_probs=35.7
Q ss_pred ccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhh
Q psy4626 75 FGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICAL 114 (542)
Q Consensus 75 l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~ 114 (542)
+.||+++|.|. |-||+.+|+.|...|++|+++++++.+..
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~ 64 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLE 64 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 67999999998 68999999999999999999999886543
No 434
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=95.42 E-value=0.025 Score=57.93 Aligned_cols=82 Identities=21% Similarity=0.236 Sum_probs=56.2
Q ss_pred cEEEEEcCChhHHH-HHHHHHhC-CCEEE-EEeCCchhhhhhhcCCce-eeCHHHHhc--CCcEEEEcCCCcccCCHHHH
Q psy4626 78 KQVVLCGYGEVGKG-CCQSLKGL-GCVIY-ITEIDPICALQACMDGFS-VVKLNEVIR--TVDIVVTATGNKNVVTREHM 151 (542)
Q Consensus 78 ktVvViG~G~IG~~-vA~~l~~~-Ga~Vi-v~d~dp~r~~~A~~~G~~-v~~l~e~l~--~aDvVi~atG~~~lI~~e~l 151 (542)
-+|+|||+|.+|+. .+..++.. +++|+ ++|+++.++. +...+.. +.++++++. +.|+|+.||.+..-. .-..
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~-~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~-~~~~ 85 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH-ADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHF-PLAQ 85 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH-TTCSSCCEESCHHHHHHCSSCCEEEECSCTTTHH-HHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH-hhCCCCceECCHHHHhcCCCCCEEEEeCChHHHH-HHHH
Confidence 48999999999986 77777766 77765 7899988765 2233443 457888884 599999997542111 2345
Q ss_pred hccCCCeEEE
Q psy4626 152 DKMKNGCVVC 161 (542)
Q Consensus 152 ~~mk~Gailv 161 (542)
..++.|.-++
T Consensus 86 ~al~aGkhV~ 95 (352)
T 3kux_A 86 SALAAGKHVV 95 (352)
T ss_dssp HHHHTTCEEE
T ss_pred HHHHCCCcEE
Confidence 5667776443
No 435
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=95.41 E-value=0.068 Score=58.37 Aligned_cols=123 Identities=11% Similarity=0.140 Sum_probs=87.4
Q ss_pred HhHHHHHHHHHHHHH---hhcCccccCcEEEEEcCChhHHHHHHHHHh----CCC-------EEEEEeCCch--------
Q psy4626 54 DNLYMCRESIIDSLK---RSTDVMFGGKQVVLCGYGEVGKGCCQSLKG----LGC-------VIYITEIDPI-------- 111 (542)
Q Consensus 54 d~~~g~~~s~~~ai~---r~~~~~l~GktVvViG~G~IG~~vA~~l~~----~Ga-------~Viv~d~dp~-------- 111 (542)
|...||+-.++.++. +.++..+...++++.|+|.-|.++|..+.. .|+ +++++|..-.
T Consensus 258 DDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~ 337 (564)
T 1pj3_A 258 DDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAK 337 (564)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSC
T ss_pred CCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHcCCChHHhhCcEEEEeCCCeEECCCccc
Confidence 566788755555443 345677888999999999999999999886 794 6888886331
Q ss_pred ----hhhhhhcCCc-eeeCHHHHhc--CCcEEEEcCCCcccCCHHHHhccC---CCeEEEeccCCCc--ccChHhhc
Q psy4626 112 ----CALQACMDGF-SVVKLNEVIR--TVDIVVTATGNKNVVTREHMDKMK---NGCVVCNMGHSNT--EIDVNSLR 176 (542)
Q Consensus 112 ----r~~~A~~~G~-~v~~l~e~l~--~aDvVi~atG~~~lI~~e~l~~mk---~GailvnvG~g~~--eid~~aL~ 176 (542)
+...|..... ...++.++++ ++|++|-+++.+++++++.++.|. +.-+|.-.+.... |+..+...
T Consensus 338 l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~~pe~a~ 414 (564)
T 1pj3_A 338 IDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAY 414 (564)
T ss_dssp CCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCSSGGGCSCCHHHHH
T ss_pred chHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCCCCccCcCHHHHH
Confidence 1112221110 0136888887 799999999878999999999997 5778877776543 77766443
No 436
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=95.39 E-value=0.043 Score=53.26 Aligned_cols=41 Identities=20% Similarity=0.442 Sum_probs=36.2
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhh
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICAL 114 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~ 114 (542)
.+.||+++|.|. |-||+.+++.|...|++|+++++++.+..
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 50 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQ 50 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 367999999998 68999999999999999999999886554
No 437
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.36 E-value=0.028 Score=55.02 Aligned_cols=64 Identities=17% Similarity=0.090 Sum_probs=49.4
Q ss_pred EEEEEcC-ChhHHHHHHHHHhC-CCEEEEEeCCchhhhhhhcCCceee-----C---HHHHhcCCcEEEEcCCC
Q psy4626 79 QVVLCGY-GEVGKGCCQSLKGL-GCVIYITEIDPICALQACMDGFSVV-----K---LNEVIRTVDIVVTATGN 142 (542)
Q Consensus 79 tVvViG~-G~IG~~vA~~l~~~-Ga~Viv~d~dp~r~~~A~~~G~~v~-----~---l~e~l~~aDvVi~atG~ 142 (542)
+|+|+|. |.||+.+++.|... |.+|++..+++.+.......+..++ + +.++++++|+||.+.|.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 6899996 99999999999988 9999999998876543334455432 2 34567899999998764
No 438
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=95.36 E-value=0.031 Score=54.12 Aligned_cols=66 Identities=18% Similarity=0.134 Sum_probs=46.1
Q ss_pred ccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHH---HHh-------cCCcEEEEcCC
Q psy4626 75 FGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLN---EVI-------RTVDIVVTATG 141 (542)
Q Consensus 75 l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~---e~l-------~~aDvVi~atG 141 (542)
.-||+++|.|. |.||+.+|+.|...|++|+++++++.+.... ..-+++.+.+ +++ ...|++|.+.|
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag 96 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH-SFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAG 96 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSE-EEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccc-ceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence 44899999998 6799999999999999999999887654321 1111233322 222 35799999877
No 439
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=95.35 E-value=0.17 Score=51.55 Aligned_cols=130 Identities=19% Similarity=0.228 Sum_probs=83.5
Q ss_pred hccc-ccceeecCch----hhhHHHHhHHHHHHHHHHHHHhhcCccccCcEEEEEcCC---hhHHHHHHHHHhC-CCEEE
Q psy4626 34 AGKL-TVPAMNVNDS----VTKTKFDNLYMCRESIIDSLKRSTDVMFGGKQVVLCGYG---EVGKGCCQSLKGL-GCVIY 104 (542)
Q Consensus 34 ~~~L-~~PV~~vn~s----~~K~~fd~~~g~~~s~~~ai~r~~~~~l~GktVvViG~G---~IG~~vA~~l~~~-Ga~Vi 104 (542)
.... .+||||.-+. ++-.+.|-. .+++..+ .+.|.+|+++|-| ++....+..+..+ |++|.
T Consensus 116 a~~~~~vPVINag~G~~~HPtQaLaDl~---------Ti~e~~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~ 185 (310)
T 3csu_A 116 TEFSGNVPVLNAGDGSNQHPTQTLLDLF---------TIQETQG-RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFY 185 (310)
T ss_dssp HHHCTTCCEEEEEETTSCCHHHHHHHHH---------HHHHHHS-CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEE
T ss_pred HHhcCCCCEEcCccCCCCCchHHHHHHH---------HHHHHhC-CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEE
Confidence 3345 7899987552 344443322 2222222 4789999999984 8899999999999 99999
Q ss_pred EEeCCchhh-----hhhhcCCce---eeCHHHHhcCCcEEEEcCCC--------------cccCCHHHHhccCCCeEEEe
Q psy4626 105 ITEIDPICA-----LQACMDGFS---VVKLNEVIRTVDIVVTATGN--------------KNVVTREHMDKMKNGCVVCN 162 (542)
Q Consensus 105 v~d~dp~r~-----~~A~~~G~~---v~~l~e~l~~aDvVi~atG~--------------~~lI~~e~l~~mk~Gailvn 162 (542)
++-+..... ..+...|.. ..+++++++++|+|.+..-. ..-++.+.++.+|+++++.-
T Consensus 186 ~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH 265 (310)
T 3csu_A 186 FIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLH 265 (310)
T ss_dssp EECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-----------------CCBCGGGGTTCCTTCEEEC
T ss_pred EECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCccccccCHHHHHHHhhccCCCHHHHhhcCCCCEEEC
Confidence 985432211 223344543 24688999999999986421 23456667777778887776
Q ss_pred ccCCCcccChH
Q psy4626 163 MGHSNTEIDVN 173 (542)
Q Consensus 163 vG~g~~eid~~ 173 (542)
++--..||+-+
T Consensus 266 ~lPrg~EI~~e 276 (310)
T 3csu_A 266 PLPRVDEIATD 276 (310)
T ss_dssp CSCCSSSBCHH
T ss_pred CCCCCCeecHH
Confidence 66544455444
No 440
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=95.35 E-value=0.15 Score=51.73 Aligned_cols=100 Identities=12% Similarity=0.003 Sum_probs=71.1
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhh--hcCCce-eeCHHHHhcCCcEEEEcC----C----
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQA--CMDGFS-VVKLNEVIRTVDIVVTAT----G---- 141 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A--~~~G~~-v~~l~e~l~~aDvVi~at----G---- 141 (542)
.+.|.+|+++|- +++....+..+..+|++|.++-+........ ....+. ..+++++++++|+|.+.. |
T Consensus 151 ~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~ 230 (301)
T 2ef0_A 151 GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAE 230 (301)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC-------
T ss_pred CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccc
Confidence 478999999999 6788999999999999999986433221110 001233 457899999999999943 1
Q ss_pred --------CcccCCHHHHhccCCCeEEEeccCC--CcccChH
Q psy4626 142 --------NKNVVTREHMDKMKNGCVVCNMGHS--NTEIDVN 173 (542)
Q Consensus 142 --------~~~lI~~e~l~~mk~GailvnvG~g--~~eid~~ 173 (542)
...-++.+.++.+|+++++.-++-. ..||+-+
T Consensus 231 ~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~~e 272 (301)
T 2ef0_A 231 REKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETTEE 272 (301)
T ss_dssp -CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCHH
T ss_pred hhHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccCHH
Confidence 1244677888888999999887754 3555544
No 441
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=95.35 E-value=0.023 Score=58.43 Aligned_cols=83 Identities=14% Similarity=0.172 Sum_probs=58.1
Q ss_pred cEEEEEcCChhHHHHHHHHH-h-CCCEEE-EEeCCchhhhh-hhcCC--ce-eeCHHHHhc--CCcEEEEcCCCcccCCH
Q psy4626 78 KQVVLCGYGEVGKGCCQSLK-G-LGCVIY-ITEIDPICALQ-ACMDG--FS-VVKLNEVIR--TVDIVVTATGNKNVVTR 148 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~-~-~Ga~Vi-v~d~dp~r~~~-A~~~G--~~-v~~l~e~l~--~aDvVi~atG~~~lI~~ 148 (542)
.+|+|||+|.+|+..+..++ . -|++++ ++|+++.++.. +...| .. +.++++++. +.|+|+.|+.+..-. .
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~-~ 102 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAHA-D 102 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGGHH-H
T ss_pred eeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHHH-H
Confidence 48999999999999999887 4 477766 78999987654 33345 33 457888875 689999998643222 2
Q ss_pred HHHhccCCCeEEE
Q psy4626 149 EHMDKMKNGCVVC 161 (542)
Q Consensus 149 e~l~~mk~Gailv 161 (542)
.....++.|.-++
T Consensus 103 ~~~~al~aGk~Vl 115 (357)
T 3ec7_A 103 VAVAALNANKYVF 115 (357)
T ss_dssp HHHHHHHTTCEEE
T ss_pred HHHHHHHCCCCEE
Confidence 3455566665444
No 442
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.34 E-value=0.0064 Score=60.88 Aligned_cols=87 Identities=14% Similarity=0.103 Sum_probs=59.4
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce---e-eCHHHHh-cCCcEEEEcCCCcccCCHHHHh
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS---V-VKLNEVI-RTVDIVVTATGNKNVVTREHMD 152 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~---v-~~l~e~l-~~aDvVi~atG~~~lI~~e~l~ 152 (542)
.+++|+|+|.+|..+|..|...|.+|+++++++.+.......|.. + .+..+.+ ..+|+||.|+-...+ .+.++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~~~--~~~l~ 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTHQL--DAVIP 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGGGH--HHHGG
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCccCH--HHHHH
Confidence 479999999999999999998899999999887544322233421 1 2333444 789999999754332 23333
Q ss_pred ----ccCCCeEEEeccCC
Q psy4626 153 ----KMKNGCVVCNMGHS 166 (542)
Q Consensus 153 ----~mk~GailvnvG~g 166 (542)
.++++..++.+.-|
T Consensus 81 ~l~~~l~~~~~iv~~~nG 98 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNG 98 (294)
T ss_dssp GHHHHEEEEEEEEECCSS
T ss_pred HHHHhhCCCCEEEEeccC
Confidence 34567777776655
No 443
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=95.34 E-value=0.073 Score=57.51 Aligned_cols=80 Identities=24% Similarity=0.376 Sum_probs=55.2
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCCEEEE-Ee----------CCchhhhhhhc-----C---CceeeCHHHHh-cCC
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYI-TE----------IDPICALQACM-----D---GFSVVKLNEVI-RTV 133 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv-~d----------~dp~r~~~A~~-----~---G~~v~~l~e~l-~~a 133 (542)
.+.|++|+|-|+|++|..+|+.|..+|++|+. .| +|+..+..... . +...++ ++++ ..|
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~-~~il~~~~ 319 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYE-GSILEVDC 319 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEEC-SCGGGSCC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeec-cccccccc
Confidence 47899999999999999999999999999886 33 33333222111 1 122222 2334 579
Q ss_pred cEEEEcCCCcccCCHHHHhccC
Q psy4626 134 DIVVTATGNKNVVTREHMDKMK 155 (542)
Q Consensus 134 DvVi~atG~~~lI~~e~l~~mk 155 (542)
||++-|... +.|+.+....++
T Consensus 320 DIliPcA~~-n~I~~~na~~l~ 340 (501)
T 3mw9_A 320 DILIPAASE-KQLTKSNAPRVK 340 (501)
T ss_dssp SEEEECSSS-CCBCTTTGGGCC
T ss_pred eEEeecccc-CccCHhHHHHcC
Confidence 999998643 688877777775
No 444
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=95.34 E-value=0.023 Score=54.99 Aligned_cols=69 Identities=17% Similarity=0.193 Sum_probs=48.5
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHH---HHh-------cCCcEEEEcCCC
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLN---EVI-------RTVDIVVTATGN 142 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~---e~l-------~~aDvVi~atG~ 142 (542)
.+.||+++|.|. |-||+.+++.|...|++|+++++++.+.........++.+.+ +++ ...|++|.+.|.
T Consensus 12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~ 91 (247)
T 1uzm_A 12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL 91 (247)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSC
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 467999999997 689999999999999999999988765432210001222222 222 368999998763
No 445
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.34 E-value=0.025 Score=57.72 Aligned_cols=67 Identities=22% Similarity=0.247 Sum_probs=48.7
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhhh-hhc--CC------cee-eCHHHHhcCCcEEEEcCCCc
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICALQ-ACM--DG------FSV-VKLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~~-A~~--~G------~~v-~~l~e~l~~aDvVi~atG~~ 143 (542)
..+|+|+|.|.+|..++..+...+. ++..+|+++.++.. +.. +. ..+ .+..+++++||+||.+.|.+
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~ 83 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAP 83 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCC
Confidence 4689999999999999999887675 89999999876542 211 11 111 13456789999999988743
No 446
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=95.32 E-value=0.018 Score=62.72 Aligned_cols=68 Identities=22% Similarity=0.215 Sum_probs=44.2
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhh-hcCCceeeCHHHH----hcCCcEEEEcCC
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQA-CMDGFSVVKLNEV----IRTVDIVVTATG 141 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A-~~~G~~v~~l~e~----l~~aDvVi~atG 141 (542)
.+.|++++|+|.|-+|+.++..|...|++|+++++++.++... ...+..+..++++ ....|++|.++|
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~~~~~dl~~~~~~~~DilVN~ag 433 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYHPEDGMVLANTTS 433 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-CEETTTTTTC--CCSEEEEECSS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceeeHHHhhhccccCceEEEECCC
Confidence 4678999999999999999999999999999999988765432 2223222222221 234688888876
No 447
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=95.32 E-value=0.024 Score=59.92 Aligned_cols=66 Identities=20% Similarity=0.321 Sum_probs=47.0
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee---CH---HHHhcCCcEEEEc
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV---KL---NEVIRTVDIVVTA 139 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~---~l---~e~l~~aDvVi~a 139 (542)
.++|++|+|+|.|.+|+.+++.++.+|.+|+++|.+|........+.+.+. +. .++++++|+|+..
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~~ 103 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVSTE 103 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEEc
Confidence 568999999999999999999999999999999877653321111212221 22 2345788988743
No 448
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=95.30 E-value=0.063 Score=54.57 Aligned_cols=64 Identities=20% Similarity=0.222 Sum_probs=47.3
Q ss_pred EEEEEcC-ChhHHHHHHHHHhCC--CEEEEEeCCchhhhhhh--cCC-----cee----eCHHHHhcCCcEEEEcCCCc
Q psy4626 79 QVVLCGY-GEVGKGCCQSLKGLG--CVIYITEIDPICALQAC--MDG-----FSV----VKLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 79 tVvViG~-G~IG~~vA~~l~~~G--a~Viv~d~dp~r~~~A~--~~G-----~~v----~~l~e~l~~aDvVi~atG~~ 143 (542)
+|+|+|. |.+|..++..|...| -+|..+|+++.+ ..+. .++ ... .+++++++++|+||.+.|.+
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~-~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~ 79 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP-GVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP 79 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH-HHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccH-HHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcC
Confidence 7999998 999999999998877 589999998832 2221 111 111 24667899999999988754
No 449
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=95.30 E-value=0.033 Score=54.22 Aligned_cols=36 Identities=19% Similarity=0.356 Sum_probs=33.4
Q ss_pred ccCcEEEEEcC---ChhHHHHHHHHHhCCCEEEEEeCCc
Q psy4626 75 FGGKQVVLCGY---GEVGKGCCQSLKGLGCVIYITEIDP 110 (542)
Q Consensus 75 l~GktVvViG~---G~IG~~vA~~l~~~Ga~Viv~d~dp 110 (542)
+.||+++|.|. |-||+.+|+.|...|++|+++++++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 57899999998 5899999999999999999999887
No 450
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.29 E-value=0.017 Score=59.76 Aligned_cols=69 Identities=12% Similarity=0.212 Sum_probs=50.2
Q ss_pred ccCcEEEEEcC-ChhHHHHHHHHHhCCC--EEEEEeCCchhhhh-hh--cC------Cce-eeCHHHHhcCCcEEEEcCC
Q psy4626 75 FGGKQVVLCGY-GEVGKGCCQSLKGLGC--VIYITEIDPICALQ-AC--MD------GFS-VVKLNEVIRTVDIVVTATG 141 (542)
Q Consensus 75 l~GktVvViG~-G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~~-A~--~~------G~~-v~~l~e~l~~aDvVi~atG 141 (542)
+.+++|+|+|. |.||..+|..+..+|. +|..+|+++.++.- +. .+ ... ..+..+++++||+||.+.|
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 45789999998 9999999999988885 89999998765431 10 11 111 1345678899999999988
Q ss_pred Cc
Q psy4626 142 NK 143 (542)
Q Consensus 142 ~~ 143 (542)
.+
T Consensus 86 ~p 87 (343)
T 3fi9_A 86 AP 87 (343)
T ss_dssp --
T ss_pred CC
Confidence 64
No 451
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=95.27 E-value=0.14 Score=52.73 Aligned_cols=100 Identities=16% Similarity=0.088 Sum_probs=71.5
Q ss_pred HHhhcCccccCcEEEEEcCC--hhHHHHHHHHHhCCCEEEEEeCCchhh-----h----hhhcCCce---eeCHHHHhcC
Q psy4626 67 LKRSTDVMFGGKQVVLCGYG--EVGKGCCQSLKGLGCVIYITEIDPICA-----L----QACMDGFS---VVKLNEVIRT 132 (542)
Q Consensus 67 i~r~~~~~l~GktVvViG~G--~IG~~vA~~l~~~Ga~Viv~d~dp~r~-----~----~A~~~G~~---v~~l~e~l~~ 132 (542)
+++..+..+.|.+|+++|-| ++....+..+..+|++|.++-+..... . .|...|.. ..++++++++
T Consensus 145 i~e~~g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~ 224 (335)
T 1dxh_A 145 MREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKG 224 (335)
T ss_dssp HHHTCSSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTT
T ss_pred HHHHcCCCcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCC
Confidence 44433325789999999996 899999999999999999985432211 1 12244533 3468899999
Q ss_pred CcEEEEcCC-----------------CcccCCHHHHhcc-CCCeEEEeccCC
Q psy4626 133 VDIVVTATG-----------------NKNVVTREHMDKM-KNGCVVCNMGHS 166 (542)
Q Consensus 133 aDvVi~atG-----------------~~~lI~~e~l~~m-k~GailvnvG~g 166 (542)
+|||.+..- .+.-++.+.++.+ ++++++.-++-.
T Consensus 225 aDvvytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP~ 276 (335)
T 1dxh_A 225 VDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLPA 276 (335)
T ss_dssp CSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECSCC
T ss_pred CCEEEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCCCC
Confidence 999999532 1245677888888 899988877753
No 452
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.27 E-value=0.038 Score=54.91 Aligned_cols=69 Identities=19% Similarity=0.140 Sum_probs=49.3
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh-------cCCceee---C------HHHHhcCCcEE
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQAC-------MDGFSVV---K------LNEVIRTVDIV 136 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~-------~~G~~v~---~------l~e~l~~aDvV 136 (542)
...|++|+|+|. |.||+.+++.|...|.+|+++++++.+..... ..++..+ + ++++++++|+|
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 357899999998 99999999999999999999998875432111 0122221 2 23445678998
Q ss_pred EEcCCC
Q psy4626 137 VTATGN 142 (542)
Q Consensus 137 i~atG~ 142 (542)
|.+.|.
T Consensus 88 ih~A~~ 93 (342)
T 1y1p_A 88 AHIASV 93 (342)
T ss_dssp EECCCC
T ss_pred EEeCCC
Confidence 887653
No 453
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.26 E-value=0.064 Score=54.55 Aligned_cols=67 Identities=18% Similarity=0.105 Sum_probs=48.6
Q ss_pred CcEEEEEcCChhHHH-HHHHHHhCCCEEEEEeCCch--hhhhhhcCCceee---CHHHHh-cCCcEEEEcCCCc
Q psy4626 77 GKQVVLCGYGEVGKG-CCQSLKGLGCVIYITEIDPI--CALQACMDGFSVV---KLNEVI-RTVDIVVTATGNK 143 (542)
Q Consensus 77 GktVvViG~G~IG~~-vA~~l~~~Ga~Viv~d~dp~--r~~~A~~~G~~v~---~l~e~l-~~aDvVi~atG~~ 143 (542)
.++|.|+|.|.+|.. +|+.|+..|++|.++|..+. ...+-...|..+. +.+.+. .++|+||..+|-+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~ 77 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAK 77 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcC
Confidence 578999999999985 89999999999999998653 2222234566543 233333 4789999887743
No 454
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=95.25 E-value=0.028 Score=55.39 Aligned_cols=76 Identities=14% Similarity=0.216 Sum_probs=52.5
Q ss_pred cEEEEEcCChhHHHHHHHHHhCCCEEEE-EeCCchhhhhhhcCCcee-eCHHHHhcCCcEEEEcCCCcccCCHHHHhccC
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGLGCVIYI-TEIDPICALQACMDGFSV-VKLNEVIRTVDIVVTATGNKNVVTREHMDKMK 155 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~Ga~Viv-~d~dp~r~~~A~~~G~~v-~~l~e~l~~aDvVi~atG~~~lI~~e~l~~mk 155 (542)
.+|+|+|+|.+|+.+++.+...+-+++. +|+++.. ..|+.+ .++++++ .+|++|+.|... .+ .+.++ ++
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~-----~~gv~v~~dl~~l~-~~DVvIDft~p~-a~-~~~~~-l~ 74 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA-----TTPYQQYQHIADVK-GADVAIDFSNPN-LL-FPLLD-ED 74 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------CCSCBCSCTTTCT-TCSEEEECSCHH-HH-HHHHT-SC
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc-----cCCCceeCCHHHHh-CCCEEEEeCChH-HH-HHHHH-Hh
Confidence 4799999999999999999877656544 6766542 345554 3567777 899999987433 33 24566 77
Q ss_pred CCeEEEe
Q psy4626 156 NGCVVCN 162 (542)
Q Consensus 156 ~Gailvn 162 (542)
.|.-++.
T Consensus 75 ~g~~vVi 81 (243)
T 3qy9_A 75 FHLPLVV 81 (243)
T ss_dssp CCCCEEE
T ss_pred cCCceEe
Confidence 7765553
No 455
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=95.22 E-value=0.037 Score=56.76 Aligned_cols=83 Identities=8% Similarity=0.110 Sum_probs=57.9
Q ss_pred cEEEEEcCChhHHHHHHHHHhC-CCEE-EEEeCCchhhhh-hhcCCc----e-eeCHHHHhc--CCcEEEEcCCCcccCC
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGL-GCVI-YITEIDPICALQ-ACMDGF----S-VVKLNEVIR--TVDIVVTATGNKNVVT 147 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~-Ga~V-iv~d~dp~r~~~-A~~~G~----~-v~~l~e~l~--~aDvVi~atG~~~lI~ 147 (542)
-+|+|||+|.+|+..+..++.. ++++ .++|+++.++.. +...|+ . +.++++++. ++|+|+.|+.+..-.
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~- 85 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHV- 85 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHH-
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHHH-
Confidence 3799999999999999888875 5665 578998877543 334453 2 357788874 699999998543211
Q ss_pred HHHHhccCCCeEEE
Q psy4626 148 REHMDKMKNGCVVC 161 (542)
Q Consensus 148 ~e~l~~mk~Gailv 161 (542)
.-....++.|.-++
T Consensus 86 ~~~~~al~aGk~V~ 99 (362)
T 1ydw_A 86 EWAIKAAEKGKHIL 99 (362)
T ss_dssp HHHHHHHTTTCEEE
T ss_pred HHHHHHHHCCCeEE
Confidence 23455677777544
No 456
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=95.18 E-value=0.092 Score=52.21 Aligned_cols=37 Identities=11% Similarity=0.246 Sum_probs=33.4
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCc
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDP 110 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp 110 (542)
.+.||+++|.|. |-||+.+|+.|...|++|+++++++
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~ 83 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPA 83 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 468999999998 5799999999999999999998763
No 457
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=95.18 E-value=0.071 Score=51.54 Aligned_cols=37 Identities=24% Similarity=0.389 Sum_probs=33.7
Q ss_pred ccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCch
Q psy4626 75 FGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPI 111 (542)
Q Consensus 75 l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~ 111 (542)
+.||+++|.|. |-||+.+++.|...|++|+++++++.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~ 39 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP 39 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 46899999998 78999999999999999999998765
No 458
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=95.17 E-value=0.022 Score=58.57 Aligned_cols=83 Identities=19% Similarity=0.115 Sum_probs=57.0
Q ss_pred cEEEEEcCChhHHH-HHHHHHhC-CCEEE-EEeCCchhhhhhhc-C-Cce-eeCHHHHhc--CCcEEEEcCCCcccCCHH
Q psy4626 78 KQVVLCGYGEVGKG-CCQSLKGL-GCVIY-ITEIDPICALQACM-D-GFS-VVKLNEVIR--TVDIVVTATGNKNVVTRE 149 (542)
Q Consensus 78 ktVvViG~G~IG~~-vA~~l~~~-Ga~Vi-v~d~dp~r~~~A~~-~-G~~-v~~l~e~l~--~aDvVi~atG~~~lI~~e 149 (542)
-+|+|||+|.+|.. .+..++.. +++++ ++|+++.++..... . +.. +.++++++. +.|+|+.|+.+..-. .-
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~-~~ 84 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHF-EM 84 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHH-HH
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHH-HH
Confidence 48999999999985 78888776 67776 78999988765433 2 333 457888885 569999997643211 22
Q ss_pred HHhccCCCeEEE
Q psy4626 150 HMDKMKNGCVVC 161 (542)
Q Consensus 150 ~l~~mk~Gailv 161 (542)
....++.|.-+.
T Consensus 85 ~~~al~aGkhVl 96 (359)
T 3m2t_A 85 GLLAMSKGVNVF 96 (359)
T ss_dssp HHHHHHTTCEEE
T ss_pred HHHHHHCCCeEE
Confidence 345566665443
No 459
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.15 E-value=0.045 Score=56.10 Aligned_cols=68 Identities=15% Similarity=0.089 Sum_probs=50.1
Q ss_pred ccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee--C------HHHHhcCCcEEEEcCCC
Q psy4626 75 FGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV--K------LNEVIRTVDIVVTATGN 142 (542)
Q Consensus 75 l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~--~------l~e~l~~aDvVi~atG~ 142 (542)
..+++|+|+|. |.||+.+++.|...|.+|+++++++.+.......+..++ + +.++++++|+||.+.|.
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~ 103 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD 103 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECcee
Confidence 35789999998 999999999999999999999987754322222233321 2 23556889999998764
No 460
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=95.15 E-value=0.029 Score=57.03 Aligned_cols=81 Identities=15% Similarity=0.201 Sum_probs=55.3
Q ss_pred EEEEEcCChhHHH-HHHHHHhC-CCEEE-EEeCCchhhhh-hhcCCce--eeCHHHHh--cCCcEEEEcCCCcccCCHHH
Q psy4626 79 QVVLCGYGEVGKG-CCQSLKGL-GCVIY-ITEIDPICALQ-ACMDGFS--VVKLNEVI--RTVDIVVTATGNKNVVTREH 150 (542)
Q Consensus 79 tVvViG~G~IG~~-vA~~l~~~-Ga~Vi-v~d~dp~r~~~-A~~~G~~--v~~l~e~l--~~aDvVi~atG~~~lI~~e~ 150 (542)
+++|||+|.||+. .+..++.. +++|+ ++|+++.++.. |...|.. +.+.++++ .+.|+|+.||.+..=. .-.
T Consensus 25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~H~-~~~ 103 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQHI-EWS 103 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGGHH-HHH
T ss_pred EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCchhH-HHH
Confidence 8999999999975 56667655 67766 68999988654 4455653 46788988 4689999987542111 223
Q ss_pred HhccCCCeEE
Q psy4626 151 MDKMKNGCVV 160 (542)
Q Consensus 151 l~~mk~Gail 160 (542)
...++.|.-+
T Consensus 104 ~~al~aGkhV 113 (350)
T 4had_A 104 IKAADAGKHV 113 (350)
T ss_dssp HHHHHTTCEE
T ss_pred HHHHhcCCEE
Confidence 4555566544
No 461
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=95.14 E-value=0.15 Score=52.42 Aligned_cols=92 Identities=13% Similarity=0.125 Sum_probs=68.5
Q ss_pred cccCcEEEEEcCC--hhHHHHHHHHHhCCCEEEEEeCCchhh-----h----hhhcCCce---eeCHHHHhcCCcEEEEc
Q psy4626 74 MFGGKQVVLCGYG--EVGKGCCQSLKGLGCVIYITEIDPICA-----L----QACMDGFS---VVKLNEVIRTVDIVVTA 139 (542)
Q Consensus 74 ~l~GktVvViG~G--~IG~~vA~~l~~~Ga~Viv~d~dp~r~-----~----~A~~~G~~---v~~l~e~l~~aDvVi~a 139 (542)
.+.|.+|+++|-| ++....+..+..+|++|.++-+..... . .|...|.. ..+++++++++|||.+.
T Consensus 152 ~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 231 (333)
T 1duv_G 152 AFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTD 231 (333)
T ss_dssp CGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeC
Confidence 5789999999996 899999999999999999985432211 1 12255643 34688999999999994
Q ss_pred C----C-------------CcccCCHHHHhcc-CCCeEEEeccC
Q psy4626 140 T----G-------------NKNVVTREHMDKM-KNGCVVCNMGH 165 (542)
Q Consensus 140 t----G-------------~~~lI~~e~l~~m-k~GailvnvG~ 165 (542)
. | .+.-++.+.++.+ ++.+++.-++-
T Consensus 232 ~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP 275 (333)
T 1duv_G 232 VWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLP 275 (333)
T ss_dssp CSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECSC
T ss_pred CccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCCC
Confidence 3 2 1245677888888 89998887775
No 462
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=95.14 E-value=0.051 Score=53.09 Aligned_cols=42 Identities=21% Similarity=0.279 Sum_probs=36.9
Q ss_pred ccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhh
Q psy4626 73 VMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICAL 114 (542)
Q Consensus 73 ~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~ 114 (542)
..+.||+++|.|. |-||+.+|+.|...|++|+++++++.+..
T Consensus 6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 48 (267)
T 3t4x_A 6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVN 48 (267)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3578999999997 67999999999999999999999886543
No 463
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.10 E-value=0.03 Score=57.42 Aligned_cols=68 Identities=22% Similarity=0.246 Sum_probs=49.7
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhhh-hh--cCCc------ee-eCHHHHhcCCcEEEEcCCCc
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICALQ-AC--MDGF------SV-VKLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~~-A~--~~G~------~v-~~l~e~l~~aDvVi~atG~~ 143 (542)
...+|+|+|.|.+|..++..+...+. ++..+|+++.++.. +. .+.. .+ .+..+++++||+||.+.|.+
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~ 87 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 35799999999999999998877665 89999999876532 21 1221 11 13456789999999988743
No 464
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.09 E-value=0.049 Score=53.61 Aligned_cols=65 Identities=20% Similarity=0.244 Sum_probs=48.8
Q ss_pred CcEEEEEcC-ChhHHHHHHHHHhCC-CEEEEEeCCchhhh--hhhcCCceee-----C---HHHHhcCCcEEEEcCC
Q psy4626 77 GKQVVLCGY-GEVGKGCCQSLKGLG-CVIYITEIDPICAL--QACMDGFSVV-----K---LNEVIRTVDIVVTATG 141 (542)
Q Consensus 77 GktVvViG~-G~IG~~vA~~l~~~G-a~Viv~d~dp~r~~--~A~~~G~~v~-----~---l~e~l~~aDvVi~atG 141 (542)
.++|+|+|. |.||+.+++.|...| .+|+++++++.+.. .....+++++ + +.++++++|+||.++|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 579999998 999999999999888 89999999876532 1112344432 2 3456788999999876
No 465
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=95.07 E-value=0.029 Score=54.96 Aligned_cols=68 Identities=13% Similarity=0.168 Sum_probs=48.0
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHHHHhcCCcEEEEcCC--CcccCCHHHHhcc
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLNEVIRTVDIVVTATG--NKNVVTREHMDKM 154 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~e~l~~aDvVi~atG--~~~lI~~e~l~~m 154 (542)
-.+|+|||.|.+|..+|..|+..|.+|+++++. + .+.++| |+...- ...++ .+....+
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~-----------------~-~~~~aD-ilavP~~ai~~vl-~~l~~~l 65 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP-----------------E-DIRDFE-LVVIDAHGVEGYV-EKLSAFA 65 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG-----------------G-GGGGCS-EEEECSSCHHHHH-HHHHTTC
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH-----------------H-HhccCC-EEEEcHHHHHHHH-HHHHHhc
Confidence 358999999999999999999999999999851 1 146688 443321 11222 2334457
Q ss_pred CCCeEEEecc
Q psy4626 155 KNGCVVCNMG 164 (542)
Q Consensus 155 k~GailvnvG 164 (542)
++|+++++++
T Consensus 66 ~~g~ivvd~s 75 (232)
T 3dfu_A 66 RRGQMFLHTS 75 (232)
T ss_dssp CTTCEEEECC
T ss_pred CCCCEEEEEC
Confidence 8899999863
No 466
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=95.06 E-value=0.04 Score=54.10 Aligned_cols=69 Identities=16% Similarity=0.134 Sum_probs=48.5
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-----eeCH---HHHh-------cCCcEEE
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-----VVKL---NEVI-------RTVDIVV 137 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-----v~~l---~e~l-------~~aDvVi 137 (542)
.+.||+++|.|. |-||+.+|+.|...|++|+++++++.+.......... +.+. ++++ ...|++|
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 92 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIV 92 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 367899999998 6799999999999999999999988765443222222 1222 1222 3789999
Q ss_pred EcCCC
Q psy4626 138 TATGN 142 (542)
Q Consensus 138 ~atG~ 142 (542)
.+.|.
T Consensus 93 nnAg~ 97 (266)
T 3p19_A 93 NNAGM 97 (266)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 87763
No 467
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.06 E-value=0.018 Score=56.41 Aligned_cols=62 Identities=15% Similarity=0.254 Sum_probs=45.8
Q ss_pred cCcEEEEEcCChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee--C------HHHHhcC-CcEEEEcCC
Q psy4626 76 GGKQVVLCGYGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV--K------LNEVIRT-VDIVVTATG 141 (542)
Q Consensus 76 ~GktVvViG~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~--~------l~e~l~~-aDvVi~atG 141 (542)
.+++|+|+|+|.||+.+++.|...|.+|+++++++.+. ..++.++ + +.+++++ +|+||.+.|
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPM----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCC----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcccc----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 35789999999999999999999999999999876542 1222221 2 2334555 899988754
No 468
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.06 E-value=0.025 Score=53.18 Aligned_cols=62 Identities=19% Similarity=0.270 Sum_probs=46.9
Q ss_pred EEEEEc-CChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-----eC-H---HHHhcCCcEEEEcCCC
Q psy4626 79 QVVLCG-YGEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-----VK-L---NEVIRTVDIVVTATGN 142 (542)
Q Consensus 79 tVvViG-~G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-----~~-l---~e~l~~aDvVi~atG~ 142 (542)
+|+|+| .|.||+.+++.|...|.+|+++++++.+.... .++.+ .+ . .++++++|+||.+.|.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~ 73 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGS 73 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence 689999 59999999999999999999999988654321 23322 23 2 3456889999998774
No 469
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=95.06 E-value=0.2 Score=50.95 Aligned_cols=126 Identities=18% Similarity=0.218 Sum_probs=81.2
Q ss_pred ccccceeecCch----hhhHHHHhHHHHHHHHHHHHHhhcCccccCcEEEEEcCC---hhHHHHHHHHHhCCCEEEEEeC
Q psy4626 36 KLTVPAMNVNDS----VTKTKFDNLYMCRESIIDSLKRSTDVMFGGKQVVLCGYG---EVGKGCCQSLKGLGCVIYITEI 108 (542)
Q Consensus 36 ~L~~PV~~vn~s----~~K~~fd~~~g~~~s~~~ai~r~~~~~l~GktVvViG~G---~IG~~vA~~l~~~Ga~Viv~d~ 108 (542)
...+||||.-+. ++-.+.|-. .+++..+ .+.|.+|+++|-| ++....+..+..+|++|.++-+
T Consensus 120 ~~~vPVINag~g~~~HPtQ~LaDl~---------Ti~e~~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P 189 (308)
T 1ml4_A 120 VAEVPVINAGDGSNQHPTQTLLDLY---------TIKKEFG-RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISP 189 (308)
T ss_dssp TCSSCEEEEEETTSCCHHHHHHHHH---------HHHHHSS-CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECC
T ss_pred hCCCCEEeCccCCccCcHHHHHHHH---------HHHHHhC-CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECC
Confidence 456788886552 343333321 2333333 4789999999985 7889999999999999999854
Q ss_pred Cchh-----hhhhhcCCce---eeCHHHHhcCCcEEEEcCCC---------------cccCCHHHHhccCCCeEEEeccC
Q psy4626 109 DPIC-----ALQACMDGFS---VVKLNEVIRTVDIVVTATGN---------------KNVVTREHMDKMKNGCVVCNMGH 165 (542)
Q Consensus 109 dp~r-----~~~A~~~G~~---v~~l~e~l~~aDvVi~atG~---------------~~lI~~e~l~~mk~GailvnvG~ 165 (542)
.... ...+...|.. ..+++++++++|+|.+..-. ..-++.+.++.+|+++++.-++-
T Consensus 190 ~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lP 269 (308)
T 1ml4_A 190 ELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLP 269 (308)
T ss_dssp GGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCSC
T ss_pred ccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCccccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCCC
Confidence 3221 1123344543 24688999999999995421 23455666777777777776664
Q ss_pred CCcccC
Q psy4626 166 SNTEID 171 (542)
Q Consensus 166 g~~eid 171 (542)
-..||+
T Consensus 270 rg~EI~ 275 (308)
T 1ml4_A 270 RVDEIH 275 (308)
T ss_dssp CSSSBC
T ss_pred CCCeec
Confidence 334444
No 470
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=95.03 E-value=0.045 Score=56.13 Aligned_cols=83 Identities=27% Similarity=0.272 Sum_probs=54.2
Q ss_pred EEEEEcCChhHHHHHHHHHhC-CCEE-EEEeCCchhhhh-hhcCCce------------------e-eCHHHHhcCCcEE
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGL-GCVI-YITEIDPICALQ-ACMDGFS------------------V-VKLNEVIRTVDIV 136 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~-Ga~V-iv~d~dp~r~~~-A~~~G~~------------------v-~~l~e~l~~aDvV 136 (542)
+|+|+|+|.||+.+++.+... ++++ .++|+++.+... +...|+. + .+.++++.++|+|
T Consensus 4 rVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDvV 83 (334)
T 2czc_A 4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDII 83 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSEE
T ss_pred EEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCEE
Confidence 799999999999999999876 4565 456877655432 3344432 1 2456777799999
Q ss_pred EEcCCCcccCCHHHHhccCCCeEEEe
Q psy4626 137 VTATGNKNVVTREHMDKMKNGCVVCN 162 (542)
Q Consensus 137 i~atG~~~lI~~e~l~~mk~Gailvn 162 (542)
++||++.--. ......++.|..++.
T Consensus 84 ~~aTp~~~h~-~~a~~~l~aGk~Vi~ 108 (334)
T 2czc_A 84 VDATPGGIGA-KNKPLYEKAGVKAIF 108 (334)
T ss_dssp EECCSTTHHH-HHHHHHHHHTCEEEE
T ss_pred EECCCccccH-HHHHHHHHcCCceEe
Confidence 9998753111 122344566666653
No 471
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=95.02 E-value=0.022 Score=55.65 Aligned_cols=64 Identities=16% Similarity=0.299 Sum_probs=48.2
Q ss_pred cCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCcee-----eC---HHHHhcCCcEEEEcCCC
Q psy4626 76 GGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSV-----VK---LNEVIRTVDIVVTATGN 142 (542)
Q Consensus 76 ~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v-----~~---l~e~l~~aDvVi~atG~ 142 (542)
.+++|+|.|. |.||+.+++.|...|.+|+++++++.+.. ..+... .+ +.+++++.|+||.+.|.
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~ 74 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAMVAGCDGIVHLGGI 74 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCC
Confidence 4689999995 89999999999999999999998876532 122221 22 23556899999998764
No 472
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=95.01 E-value=0.022 Score=54.23 Aligned_cols=63 Identities=13% Similarity=0.093 Sum_probs=45.0
Q ss_pred cEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeC---HHHHhc----CCcEEEEcCCC
Q psy4626 78 KQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVK---LNEVIR----TVDIVVTATGN 142 (542)
Q Consensus 78 ktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~---l~e~l~----~aDvVi~atG~ 142 (542)
|+++|+|. |.||+.+++.|...|.+|+++++++.+... ....++.+ ++++++ +.|+||.+.|.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~ 72 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGV 72 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--cccCCcccHHHHHHHHHHcCCCccEEEECCCC
Confidence 57999998 899999999999999999999988754321 01111222 223333 79999998774
No 473
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=95.01 E-value=0.039 Score=53.07 Aligned_cols=38 Identities=16% Similarity=0.154 Sum_probs=34.0
Q ss_pred cCcEEEEEcC-ChhHHHHHHHHHh-CCCEEEEEeCCchhh
Q psy4626 76 GGKQVVLCGY-GEVGKGCCQSLKG-LGCVIYITEIDPICA 113 (542)
Q Consensus 76 ~GktVvViG~-G~IG~~vA~~l~~-~Ga~Viv~d~dp~r~ 113 (542)
.|++++|.|. |-||+.+++.|.. .|++|+++++++.+.
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~ 42 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRG 42 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHH
Confidence 5899999997 7899999999999 999999999987654
No 474
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.01 E-value=0.033 Score=55.88 Aligned_cols=64 Identities=22% Similarity=0.326 Sum_probs=45.7
Q ss_pred ccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCce-----eeC---HHHHhcCCcEEEEcCCC
Q psy4626 73 VMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFS-----VVK---LNEVIRTVDIVVTATGN 142 (542)
Q Consensus 73 ~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~-----v~~---l~e~l~~aDvVi~atG~ 142 (542)
....+++|+|+|. |.||+.+++.|...|.+|+++++++.. .++. +.+ +.+++.++|+||.+.+.
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF 87 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence 3567899999998 999999999999999999999987653 1222 112 34567899999997763
No 475
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=94.99 E-value=0.05 Score=56.05 Aligned_cols=85 Identities=21% Similarity=0.279 Sum_probs=53.1
Q ss_pred EEEEEcCChhHHHHHHHHHhC-CCEEE-EEeCCchhhh-hhhcCCceee------------------CHHHHhcCCcEEE
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGL-GCVIY-ITEIDPICAL-QACMDGFSVV------------------KLNEVIRTVDIVV 137 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~-Ga~Vi-v~d~dp~r~~-~A~~~G~~v~------------------~l~e~l~~aDvVi 137 (542)
+|+|+|+|.||+.+++.+... +++++ ++|+++.+.. .+...|+.+. +.++++.++|+|+
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV~ 82 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEEE
Confidence 799999999999999998765 46654 4676655432 2333444332 1223345799999
Q ss_pred EcCCCcccCCHHHH-hccCCCeEEEeccC
Q psy4626 138 TATGNKNVVTREHM-DKMKNGCVVCNMGH 165 (542)
Q Consensus 138 ~atG~~~lI~~e~l-~~mk~GailvnvG~ 165 (542)
+|||..- ..+.. ..++.|+.++..|.
T Consensus 83 ~aTp~~~--s~~~a~~~~~aG~kvV~~sa 109 (340)
T 1b7g_O 83 DTTPNGV--GAQYKPIYLQLQRNAIFQGG 109 (340)
T ss_dssp ECCSTTH--HHHHHHHHHHTTCEEEECTT
T ss_pred ECCCCch--hHHHHHHHHHcCCeEEEeCC
Confidence 9987632 22222 23466776665553
No 476
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=94.99 E-value=0.059 Score=52.31 Aligned_cols=41 Identities=17% Similarity=0.181 Sum_probs=36.2
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhh
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICAL 114 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~ 114 (542)
.+.||+++|.|. |-||+.+++.|...|++|+++++++.+..
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 45 (263)
T 3ai3_A 4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLH 45 (263)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 467999999997 78999999999999999999999876543
No 477
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=94.98 E-value=0.025 Score=57.72 Aligned_cols=67 Identities=18% Similarity=0.245 Sum_probs=46.5
Q ss_pred CcEEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhhh-hh--cCCc------eee-CHHHHhcCCcEEEEcCCCc
Q psy4626 77 GKQVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICALQ-AC--MDGF------SVV-KLNEVIRTVDIVVTATGNK 143 (542)
Q Consensus 77 GktVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~~-A~--~~G~------~v~-~l~e~l~~aDvVi~atG~~ 143 (542)
..+|+|+|.|.+|..++..+...|. +|..+|+++.++.. +. .++. .+. +..+++++||+||.+.|.+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p 85 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGAN 85 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 4589999999999999999998887 99999999865431 11 1121 111 2245689999999998754
No 478
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=94.98 E-value=0.069 Score=52.23 Aligned_cols=38 Identities=18% Similarity=0.342 Sum_probs=33.4
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCch
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPI 111 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~ 111 (542)
.+.||+++|.|. |-||+.+|+.|...|++|++++.++.
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~ 53 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANST 53 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 578999999998 57999999999999999999876543
No 479
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=94.96 E-value=0.066 Score=53.38 Aligned_cols=65 Identities=14% Similarity=0.189 Sum_probs=45.7
Q ss_pred cEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceee-----C---HHHHhcCCcEEEEcCCC
Q psy4626 78 KQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVV-----K---LNEVIRTVDIVVTATGN 142 (542)
Q Consensus 78 ktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~-----~---l~e~l~~aDvVi~atG~ 142 (542)
.+|+|+|. |.||+.+++.|...|.+|+++++++.+.......++.++ + +.++++++|+||.+.|.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGY 87 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence 48999996 999999999999999999999988765432112233322 2 23456789999988763
No 480
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.95 E-value=0.041 Score=54.10 Aligned_cols=66 Identities=21% Similarity=0.276 Sum_probs=48.4
Q ss_pred CcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCc-------hhhhhh---hcCCceee--C------HHHHhcCCcEEE
Q psy4626 77 GKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDP-------ICALQA---CMDGFSVV--K------LNEVIRTVDIVV 137 (542)
Q Consensus 77 GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp-------~r~~~A---~~~G~~v~--~------l~e~l~~aDvVi 137 (542)
+++|+|+|. |.||+.+++.|...|.+|++.++++ .+.... ...|+.++ + +.++++++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 568999997 9999999999999999999999886 332111 12354432 2 345678899999
Q ss_pred EcCCC
Q psy4626 138 TATGN 142 (542)
Q Consensus 138 ~atG~ 142 (542)
.+.|.
T Consensus 82 ~~a~~ 86 (307)
T 2gas_A 82 CAAGR 86 (307)
T ss_dssp ECSSS
T ss_pred ECCcc
Confidence 98764
No 481
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=94.94 E-value=0.031 Score=59.85 Aligned_cols=85 Identities=18% Similarity=0.267 Sum_probs=59.7
Q ss_pred cEEEEEcCChhHHHHHHHHHhC-CCE-EEEEeCCchhhhhhhc-C-C----------------------ce-eeCHHHHh
Q psy4626 78 KQVVLCGYGEVGKGCCQSLKGL-GCV-IYITEIDPICALQACM-D-G----------------------FS-VVKLNEVI 130 (542)
Q Consensus 78 ktVvViG~G~IG~~vA~~l~~~-Ga~-Viv~d~dp~r~~~A~~-~-G----------------------~~-v~~l~e~l 130 (542)
-+|+|||+|.+|+..+..+... |++ +.++|+++.++..+.. . | .. +.+.++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 4899999999999998887654 665 4568999988664422 1 3 12 34677887
Q ss_pred c--CCcEEEEcCCCcccCCHHHHhccCCCeEEEe
Q psy4626 131 R--TVDIVVTATGNKNVVTREHMDKMKNGCVVCN 162 (542)
Q Consensus 131 ~--~aDvVi~atG~~~lI~~e~l~~mk~Gailvn 162 (542)
. +.|+|+++|+++..--.-.+..++.|.-++.
T Consensus 104 ~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~ 137 (446)
T 3upl_A 104 SNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVM 137 (446)
T ss_dssp TCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEe
Confidence 4 6899999998753211245677888887774
No 482
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=94.92 E-value=0.032 Score=57.30 Aligned_cols=82 Identities=21% Similarity=0.182 Sum_probs=55.5
Q ss_pred cEEEEEcCChhHHH-HHHHHHhC-CCEEE-EEeCCchhhhhhhcCCce-eeCHHHHhc--CCcEEEEcCCCcccCCHHHH
Q psy4626 78 KQVVLCGYGEVGKG-CCQSLKGL-GCVIY-ITEIDPICALQACMDGFS-VVKLNEVIR--TVDIVVTATGNKNVVTREHM 151 (542)
Q Consensus 78 ktVvViG~G~IG~~-vA~~l~~~-Ga~Vi-v~d~dp~r~~~A~~~G~~-v~~l~e~l~--~aDvVi~atG~~~lI~~e~l 151 (542)
-+|+|||+|.+|+. .+..++.. +++|+ ++|+++.+.. +...+.. +.++++++. +.|+|+.||.+..-. .-..
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~-~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~-~~~~ 83 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVK-RDFPDAEVVHELEEITNDPAIELVIVTTPSGLHY-EHTM 83 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHH-HHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHH-HHHH
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH-hhCCCCceECCHHHHhcCCCCCEEEEcCCcHHHH-HHHH
Confidence 38999999999986 67777665 77764 6898887632 2222444 457888885 799999998643211 2345
Q ss_pred hccCCCeEEE
Q psy4626 152 DKMKNGCVVC 161 (542)
Q Consensus 152 ~~mk~Gailv 161 (542)
..++.|.-++
T Consensus 84 ~al~aGkhVl 93 (358)
T 3gdo_A 84 ACIQAGKHVV 93 (358)
T ss_dssp HHHHTTCEEE
T ss_pred HHHHcCCeEE
Confidence 5666776554
No 483
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=94.92 E-value=0.054 Score=54.23 Aligned_cols=70 Identities=16% Similarity=0.132 Sum_probs=49.5
Q ss_pred ccccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhh-hc-CCcee-----eC---HHHHhc--CCcEEEEc
Q psy4626 73 VMFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQA-CM-DGFSV-----VK---LNEVIR--TVDIVVTA 139 (542)
Q Consensus 73 ~~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A-~~-~G~~v-----~~---l~e~l~--~aDvVi~a 139 (542)
..+.|++|+|+|. |.||+.+++.|...|.+|+++++++...... .. .++.+ .+ ++++++ ++|+||.+
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~ 95 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHS 95 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEEC
Confidence 4578999999998 9999999999999999999999865432211 11 12221 12 234556 88999987
Q ss_pred CCC
Q psy4626 140 TGN 142 (542)
Q Consensus 140 tG~ 142 (542)
.|.
T Consensus 96 A~~ 98 (330)
T 2pzm_A 96 AAA 98 (330)
T ss_dssp CCC
T ss_pred Ccc
Confidence 764
No 484
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=94.92 E-value=0.055 Score=55.02 Aligned_cols=69 Identities=19% Similarity=0.267 Sum_probs=51.2
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhC-CC-EEEEEeCCchhhhhhh----cCCcee-----eC---HHHHhcCCcEEEE
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGL-GC-VIYITEIDPICALQAC----MDGFSV-----VK---LNEVIRTVDIVVT 138 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~-Ga-~Viv~d~dp~r~~~A~----~~G~~v-----~~---l~e~l~~aDvVi~ 138 (542)
.+.|++|+|+|. |.||+.+++.|... |. +|+++++++.+..... ..+..+ .+ +.++++++|+||.
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih 97 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH 97 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence 467999999996 99999999999998 98 9999999876543211 123322 12 2355688999999
Q ss_pred cCCC
Q psy4626 139 ATGN 142 (542)
Q Consensus 139 atG~ 142 (542)
+.|.
T Consensus 98 ~Aa~ 101 (344)
T 2gn4_A 98 AAAL 101 (344)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8764
No 485
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=94.91 E-value=0.06 Score=54.29 Aligned_cols=69 Identities=16% Similarity=0.101 Sum_probs=49.0
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchh----hhhhh-------cCCceee--C------HHHHhcCC
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPIC----ALQAC-------MDGFSVV--K------LNEVIRTV 133 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r----~~~A~-------~~G~~v~--~------l~e~l~~a 133 (542)
.+.+++|+|+|+ |.||+.+++.|...|.+|+++++++.. ..... ..++.++ + +.++++++
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 356899999999 999999999999999999999986531 11100 1233321 2 23456789
Q ss_pred cEEEEcCCC
Q psy4626 134 DIVVTATGN 142 (542)
Q Consensus 134 DvVi~atG~ 142 (542)
|+||.+.|.
T Consensus 104 d~vih~A~~ 112 (352)
T 1sb8_A 104 DYVLHQAAL 112 (352)
T ss_dssp SEEEECCSC
T ss_pred CEEEECCcc
Confidence 999998764
No 486
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=94.90 E-value=0.055 Score=51.58 Aligned_cols=41 Identities=20% Similarity=0.365 Sum_probs=36.4
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhh
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICAL 114 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~ 114 (542)
.+.|++++|.|. |.||+.+++.|...|++|+++++++.+..
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~ 45 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD 45 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 367999999998 79999999999999999999998876543
No 487
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=94.87 E-value=0.093 Score=53.06 Aligned_cols=64 Identities=17% Similarity=0.114 Sum_probs=45.9
Q ss_pred EEEEEcCChhHHHHHHHHHhCCC--EEEEEeCCchhhh-hhhc-------CCc--ee--eCHHHHhcCCcEEEEcCCC
Q psy4626 79 QVVLCGYGEVGKGCCQSLKGLGC--VIYITEIDPICAL-QACM-------DGF--SV--VKLNEVIRTVDIVVTATGN 142 (542)
Q Consensus 79 tVvViG~G~IG~~vA~~l~~~Ga--~Viv~d~dp~r~~-~A~~-------~G~--~v--~~l~e~l~~aDvVi~atG~ 142 (542)
+|.|+|+|.||..+|..+...|. ++..+|+++.++. +|.. .+. .+ .+.-+.+++||+||.+.|.
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~ 79 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGL 79 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCC
Confidence 79999999999999999887775 8999999885532 1211 111 11 1223568999999998873
No 488
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=94.85 E-value=0.062 Score=51.77 Aligned_cols=41 Identities=17% Similarity=0.227 Sum_probs=36.1
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhh
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICAL 114 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~ 114 (542)
.+.|++++|+|. |.||+.+++.|...|++|+++++++.+..
T Consensus 9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~ 50 (265)
T 2o23_A 9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE 50 (265)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHH
Confidence 467999999998 68999999999999999999998876543
No 489
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=94.85 E-value=0.029 Score=55.16 Aligned_cols=69 Identities=19% Similarity=0.266 Sum_probs=48.6
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeCHH---HH-------hcCCcEEEEcCCC
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVKLN---EV-------IRTVDIVVTATGN 142 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~l~---e~-------l~~aDvVi~atG~ 142 (542)
.+.||+++|.|. |-||+.+|+.|...|++|+++++++...........++.+.+ ++ +...|++|.+.|.
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~ 104 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGV 104 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 467999999998 579999999999999999999987755432222122233322 11 2478999998763
No 490
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=94.85 E-value=0.051 Score=56.12 Aligned_cols=37 Identities=22% Similarity=0.336 Sum_probs=34.0
Q ss_pred cccCcEEEEEcCChhHHHHHHHHHhCCC-EEEEEeCCc
Q psy4626 74 MFGGKQVVLCGYGEVGKGCCQSLKGLGC-VIYITEIDP 110 (542)
Q Consensus 74 ~l~GktVvViG~G~IG~~vA~~l~~~Ga-~Viv~d~dp 110 (542)
.+.+++|+|+|+|.+|..+|+.|...|+ +++++|.|.
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 4679999999999999999999999998 899998765
No 491
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=94.84 E-value=0.053 Score=52.65 Aligned_cols=42 Identities=24% Similarity=0.366 Sum_probs=36.9
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhh
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQ 115 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~ 115 (542)
.+.||+++|.|. |-||+.+|+.|...|++|+++++++.+..+
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~ 47 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQ 47 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 367999999997 689999999999999999999998876543
No 492
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=94.82 E-value=0.029 Score=54.02 Aligned_cols=64 Identities=17% Similarity=0.204 Sum_probs=44.7
Q ss_pred cEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhhcCCceeeC---HHHHhc----CCcEEEEcCCCc
Q psy4626 78 KQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQACMDGFSVVK---LNEVIR----TVDIVVTATGNK 143 (542)
Q Consensus 78 ktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~~~G~~v~~---l~e~l~----~aDvVi~atG~~ 143 (542)
|+++|.|. |-||+.+++.|...|++|+++++++.+... ....++.+ ++++++ ..|++|.+.|..
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~ 73 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG 73 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--ccccCCCCHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 57999997 689999999999999999999988754321 11112222 223343 459999988743
No 493
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=94.82 E-value=0.025 Score=55.10 Aligned_cols=65 Identities=18% Similarity=0.160 Sum_probs=47.7
Q ss_pred cEEEEEcC-ChhHHHHHHHHHhC--CCEEEEEeCCchhhhhhhcCCceee-----C---HHHHhcCCcEEEEcCCC
Q psy4626 78 KQVVLCGY-GEVGKGCCQSLKGL--GCVIYITEIDPICALQACMDGFSVV-----K---LNEVIRTVDIVVTATGN 142 (542)
Q Consensus 78 ktVvViG~-G~IG~~vA~~l~~~--Ga~Viv~d~dp~r~~~A~~~G~~v~-----~---l~e~l~~aDvVi~atG~ 142 (542)
++|+|+|. |.||+.+++.|... |.+|+++++++.+.......++.++ + +.++++++|+||.+.+.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP 76 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCC
Confidence 46899998 99999999999988 9999999988765432222343322 2 33567889999988764
No 494
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=94.80 E-value=0.041 Score=55.75 Aligned_cols=83 Identities=13% Similarity=0.170 Sum_probs=57.3
Q ss_pred cEEEEEcCChhHH-HHHHHHHhCCCEE-EEEeCCchhhhh-hhcC-Cce-eeCHHHHhc--CCcEEEEcCCCcccCCHHH
Q psy4626 78 KQVVLCGYGEVGK-GCCQSLKGLGCVI-YITEIDPICALQ-ACMD-GFS-VVKLNEVIR--TVDIVVTATGNKNVVTREH 150 (542)
Q Consensus 78 ktVvViG~G~IG~-~vA~~l~~~Ga~V-iv~d~dp~r~~~-A~~~-G~~-v~~l~e~l~--~aDvVi~atG~~~lI~~e~ 150 (542)
-+|+|||+|.+|. ..+..++..|+++ .++|+++.++.. +... +.. +.+.++++. +.|+|+.||.+..-. ...
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~-~~~ 83 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRA-ELA 83 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHH-HHH
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHH-HHH
Confidence 3799999999996 5677777778985 678999987653 3333 333 457888885 699999997643212 234
Q ss_pred HhccCCCe-EEE
Q psy4626 151 MDKMKNGC-VVC 161 (542)
Q Consensus 151 l~~mk~Ga-ilv 161 (542)
...++.|. +++
T Consensus 84 ~~al~aGkhVl~ 95 (336)
T 2p2s_A 84 LRTLDAGKDFFT 95 (336)
T ss_dssp HHHHHTTCEEEE
T ss_pred HHHHHCCCcEEE
Confidence 55677776 444
No 495
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=94.79 E-value=0.059 Score=52.11 Aligned_cols=39 Identities=21% Similarity=0.348 Sum_probs=34.5
Q ss_pred ccccCcEEEEEcC---ChhHHHHHHHHHhCCCEEEEEeCCch
Q psy4626 73 VMFGGKQVVLCGY---GEVGKGCCQSLKGLGCVIYITEIDPI 111 (542)
Q Consensus 73 ~~l~GktVvViG~---G~IG~~vA~~l~~~Ga~Viv~d~dp~ 111 (542)
..+.+|+++|.|. |.||+.+|+.|...|++|+++++++.
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~ 51 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR 51 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh
Confidence 3578999999996 58999999999999999999988753
No 496
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=94.79 E-value=0.072 Score=51.34 Aligned_cols=68 Identities=18% Similarity=0.170 Sum_probs=48.3
Q ss_pred ccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhhhhh-cCCcee-----eCHH---HHh-------cCCcEEE
Q psy4626 75 FGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICALQAC-MDGFSV-----VKLN---EVI-------RTVDIVV 137 (542)
Q Consensus 75 l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~~A~-~~G~~v-----~~l~---e~l-------~~aDvVi 137 (542)
+.|++++|.|. |-||+.+++.|...|++|+++++++.+..... ..|... .+.+ +++ ...|++|
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv 82 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV 82 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 56899999998 68999999999999999999999886654322 223322 1221 222 3579998
Q ss_pred EcCCC
Q psy4626 138 TATGN 142 (542)
Q Consensus 138 ~atG~ 142 (542)
.+.|.
T Consensus 83 n~Ag~ 87 (245)
T 1uls_A 83 HYAGI 87 (245)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 87763
No 497
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=94.78 E-value=0.062 Score=51.09 Aligned_cols=41 Identities=15% Similarity=0.272 Sum_probs=36.4
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhh
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICAL 114 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~ 114 (542)
.+.|++++|.|. |-||+.+++.|...|++|+++++++.+..
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~ 45 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV 45 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 467999999998 79999999999999999999999876543
No 498
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=94.78 E-value=0.056 Score=52.40 Aligned_cols=40 Identities=15% Similarity=0.279 Sum_probs=35.9
Q ss_pred ccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhh
Q psy4626 75 FGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICAL 114 (542)
Q Consensus 75 l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~ 114 (542)
+.|++++|.|. |-||+.+++.|...|++|+++++++.+..
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~ 43 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGA 43 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 57999999998 78999999999999999999999886554
No 499
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=94.77 E-value=0.077 Score=52.37 Aligned_cols=41 Identities=15% Similarity=0.240 Sum_probs=36.6
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCCCEEEEEeCCchhhh
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLGCVIYITEIDPICAL 114 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~Ga~Viv~d~dp~r~~ 114 (542)
.+.||+++|.|. |-||+.+|+.|...|++|+++++++.+..
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~ 70 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQ 70 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 578999999998 67999999999999999999999876543
No 500
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=94.74 E-value=0.067 Score=54.72 Aligned_cols=69 Identities=16% Similarity=0.145 Sum_probs=49.9
Q ss_pred cccCcEEEEEcC-ChhHHHHHHHHHhCC-CEEEEEeCCchhhhhhh--cCCceee-----C---HHHHhcCCcEEEEcCC
Q psy4626 74 MFGGKQVVLCGY-GEVGKGCCQSLKGLG-CVIYITEIDPICALQAC--MDGFSVV-----K---LNEVIRTVDIVVTATG 141 (542)
Q Consensus 74 ~l~GktVvViG~-G~IG~~vA~~l~~~G-a~Viv~d~dp~r~~~A~--~~G~~v~-----~---l~e~l~~aDvVi~atG 141 (542)
.+.+++|+|+|. |.||+.+++.|...| .+|+++++++....... ..++.++ + ++++++++|+||.+.|
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 467899999997 999999999999999 99999998765422111 1233322 2 2345678999999876
Q ss_pred C
Q psy4626 142 N 142 (542)
Q Consensus 142 ~ 142 (542)
.
T Consensus 109 ~ 109 (377)
T 2q1s_A 109 Y 109 (377)
T ss_dssp C
T ss_pred c
Confidence 4
Done!