Query psy463
Match_columns 790
No_of_seqs 433 out of 4118
Neff 10.4
Searched_HMMs 46136
Date Fri Aug 16 21:44:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy463.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/463hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2100|consensus 100.0 2.1E-49 4.5E-54 443.4 53.9 456 244-790 286-749 (755)
2 KOG2281|consensus 100.0 2.2E-45 4.7E-50 372.0 33.6 454 247-787 358-866 (867)
3 COG1506 DAP2 Dipeptidyl aminop 100.0 5.5E-43 1.2E-47 391.0 50.2 442 246-790 167-618 (620)
4 PRK10115 protease 2; Provision 100.0 7.7E-35 1.7E-39 326.6 55.8 530 113-788 131-675 (686)
5 PF00326 Peptidase_S9: Prolyl 100.0 1.7E-27 3.8E-32 232.5 17.7 202 521-790 2-211 (213)
6 PF00930 DPPIV_N: Dipeptidyl p 99.9 3.4E-26 7.4E-31 240.1 24.2 167 244-436 181-351 (353)
7 PRK01029 tolB translocation pr 99.9 1.9E-21 4.2E-26 208.0 27.3 232 113-424 189-426 (428)
8 PRK01029 tolB translocation pr 99.9 1.4E-20 3.1E-25 201.4 28.5 263 114-454 142-412 (428)
9 PRK04043 tolB translocation pr 99.9 2.2E-20 4.8E-25 198.2 28.9 235 143-452 169-407 (419)
10 PRK04043 tolB translocation pr 99.9 1.1E-20 2.3E-25 200.6 25.6 216 113-402 192-408 (419)
11 COG1770 PtrB Protease II [Amin 99.9 1.6E-17 3.4E-22 173.4 47.2 489 114-692 134-641 (682)
12 PRK05137 tolB translocation pr 99.9 2.3E-20 4.9E-25 202.5 26.3 226 113-422 206-432 (435)
13 PRK03629 tolB translocation pr 99.9 2.7E-20 5.8E-25 200.4 26.6 226 112-422 202-427 (429)
14 PRK02889 tolB translocation pr 99.9 5E-20 1.1E-24 198.6 26.8 226 112-422 199-424 (427)
15 KOG1455|consensus 99.9 1.1E-20 2.4E-25 179.2 19.0 279 471-788 28-312 (313)
16 PRK05137 tolB translocation pr 99.9 6.8E-20 1.5E-24 198.7 27.3 252 121-453 166-420 (435)
17 PRK04792 tolB translocation pr 99.9 1.4E-19 2.9E-24 195.6 26.8 226 112-422 221-446 (448)
18 PRK03629 tolB translocation pr 99.9 1.8E-19 4E-24 193.9 27.4 251 121-453 164-414 (429)
19 PRK04922 tolB translocation pr 99.8 1.8E-19 4E-24 195.1 26.5 226 112-422 207-432 (433)
20 COG1505 Serine proteases of th 99.8 1.2E-19 2.6E-24 186.4 22.2 291 419-790 346-648 (648)
21 PRK13604 luxD acyl transferase 99.8 1.5E-19 3.2E-24 178.1 21.7 235 473-772 12-247 (307)
22 PRK00178 tolB translocation pr 99.8 7.8E-19 1.7E-23 191.1 27.6 253 119-452 161-413 (430)
23 PRK04922 tolB translocation pr 99.8 5.7E-19 1.2E-23 191.2 26.1 252 121-453 168-419 (433)
24 PRK00178 tolB translocation pr 99.8 6.1E-19 1.3E-23 191.9 26.2 226 112-422 202-427 (430)
25 PRK04792 tolB translocation pr 99.8 1.1E-18 2.4E-23 188.5 26.3 251 121-453 183-433 (448)
26 PLN02298 hydrolase, alpha/beta 99.8 5.5E-19 1.2E-23 185.3 22.5 276 471-789 33-318 (330)
27 PRK02889 tolB translocation pr 99.8 2.7E-18 5.8E-23 185.2 26.3 251 114-452 160-410 (427)
28 PRK10566 esterase; Provisional 99.8 1.1E-18 2.5E-23 175.3 19.2 233 483-789 12-249 (249)
29 PLN02385 hydrolase; alpha/beta 99.8 2.2E-18 4.9E-23 181.7 21.7 274 474-790 65-347 (349)
30 PLN02442 S-formylglutathione h 99.8 3.1E-18 6.6E-23 173.6 21.3 245 470-790 18-282 (283)
31 PRK01742 tolB translocation pr 99.8 1.7E-17 3.7E-22 179.3 26.4 161 251-453 252-412 (429)
32 PRK05077 frsA fermentation/res 99.8 8.6E-18 1.9E-22 178.7 23.3 248 469-790 167-414 (414)
33 TIGR02821 fghA_ester_D S-formy 99.8 2E-17 4.3E-22 167.6 23.7 238 472-788 15-274 (275)
34 KOG2237|consensus 99.8 2.6E-15 5.6E-20 155.5 36.8 188 424-624 393-588 (712)
35 COG4946 Uncharacterized protei 99.8 5.1E-16 1.1E-20 153.2 29.9 352 9-454 80-486 (668)
36 PRK01742 tolB translocation pr 99.8 2.5E-17 5.5E-22 178.0 21.1 133 249-423 294-426 (429)
37 PHA02857 monoglyceride lipase; 99.8 4.3E-17 9.4E-22 166.7 21.8 264 476-789 6-274 (276)
38 COG0823 TolB Periplasmic compo 99.8 2.9E-17 6.2E-22 172.6 19.5 125 244-393 279-403 (425)
39 TIGR02800 propeller_TolB tol-p 99.8 2.7E-16 5.8E-21 171.3 27.2 168 251-453 238-405 (417)
40 COG1647 Esterase/lipase [Gener 99.7 1.7E-17 3.7E-22 149.3 13.8 221 502-787 16-243 (243)
41 PRK10162 acetyl esterase; Prov 99.7 1.4E-16 2.9E-21 164.5 21.7 246 470-790 57-317 (318)
42 PRK10749 lysophospholipase L2; 99.7 1.4E-16 3E-21 166.4 22.0 287 470-788 30-329 (330)
43 PLN02652 hydrolase; alpha/beta 99.7 1.2E-16 2.7E-21 168.2 21.4 272 471-789 111-388 (395)
44 PF01738 DLH: Dienelactone hyd 99.7 5E-17 1.1E-21 159.1 17.0 202 483-789 1-218 (218)
45 PF05448 AXE1: Acetyl xylan es 99.7 1E-16 2.2E-21 162.8 19.3 249 469-788 55-320 (320)
46 KOG1552|consensus 99.7 2.1E-16 4.5E-21 147.5 16.5 219 469-788 34-252 (258)
47 COG2267 PldB Lysophospholipase 99.7 2.1E-16 4.6E-21 159.9 17.0 269 471-789 10-295 (298)
48 COG0823 TolB Periplasmic compo 99.7 3.1E-15 6.7E-20 157.3 25.2 234 143-449 173-406 (425)
49 TIGR02800 propeller_TolB tol-p 99.7 6.1E-16 1.3E-20 168.5 20.7 226 10-366 192-417 (417)
50 COG0412 Dienelactone hydrolase 99.7 2.6E-15 5.7E-20 146.1 19.8 212 472-790 4-235 (236)
51 COG3458 Acetyl esterase (deace 99.7 1.2E-15 2.6E-20 141.4 15.8 244 469-787 55-316 (321)
52 PLN02511 hydrolase 99.7 1.8E-15 3.9E-20 160.5 18.3 281 470-788 71-365 (388)
53 PRK05371 x-prolyl-dipeptidyl a 99.7 1E-14 2.2E-19 165.3 24.1 234 527-790 273-521 (767)
54 PRK10985 putative hydrolase; P 99.7 6.5E-15 1.4E-19 153.2 20.6 274 471-789 32-321 (324)
55 TIGR03343 biphenyl_bphD 2-hydr 99.6 4.2E-15 9.1E-20 152.7 17.9 244 502-786 31-281 (282)
56 TIGR03611 RutD pyrimidine util 99.6 3.3E-15 7.2E-20 151.2 16.8 243 499-787 11-257 (257)
57 KOG4391|consensus 99.6 1.6E-15 3.4E-20 135.1 12.1 229 470-788 54-282 (300)
58 PRK00870 haloalkane dehalogena 99.6 2.9E-14 6.3E-19 147.6 21.7 253 501-788 46-301 (302)
59 TIGR01840 esterase_phb esteras 99.6 1.4E-14 3.1E-19 140.8 17.1 125 485-619 1-129 (212)
60 PF14583 Pectate_lyase22: Olig 99.6 3.9E-13 8.4E-18 134.8 27.5 262 112-445 39-383 (386)
61 TIGR01607 PST-A Plasmodium sub 99.6 1.4E-14 3E-19 150.6 18.0 279 475-786 2-331 (332)
62 TIGR02240 PHA_depoly_arom poly 99.6 1.3E-14 2.8E-19 148.2 17.4 255 479-788 10-266 (276)
63 PRK11460 putative hydrolase; P 99.6 2.5E-14 5.4E-19 140.4 18.5 186 498-789 13-209 (232)
64 PLN02824 hydrolase, alpha/beta 99.6 2.6E-14 5.7E-19 147.5 18.6 266 479-788 16-294 (294)
65 KOG4178|consensus 99.6 1.5E-13 3.2E-18 133.7 21.4 260 499-789 42-321 (322)
66 TIGR03056 bchO_mg_che_rel puta 99.6 1.7E-14 3.6E-19 148.0 16.0 257 479-786 14-278 (278)
67 PLN03087 BODYGUARD 1 domain co 99.6 5.1E-14 1.1E-18 150.1 20.0 277 479-787 184-478 (481)
68 PLN02965 Probable pheophorbida 99.6 1.2E-13 2.6E-18 139.1 20.1 244 503-788 5-253 (255)
69 TIGR00976 /NonD putative hydro 99.6 1.3E-13 2.9E-18 153.7 22.1 134 476-623 2-135 (550)
70 PRK06489 hypothetical protein; 99.6 9.5E-14 2.1E-18 147.0 19.7 68 717-789 285-358 (360)
71 COG0657 Aes Esterase/lipase [L 99.6 1.2E-13 2.7E-18 143.2 20.2 241 478-789 59-311 (312)
72 KOG1515|consensus 99.6 2.9E-13 6.3E-18 136.4 21.9 254 475-788 66-335 (336)
73 COG2945 Predicted hydrolase of 99.6 4.2E-14 9E-19 124.7 13.4 183 499-789 26-209 (210)
74 TIGR02427 protocat_pcaD 3-oxoa 99.6 1.6E-14 3.5E-19 145.5 12.5 238 500-786 12-251 (251)
75 PF02129 Peptidase_S15: X-Pro 99.6 9.4E-14 2E-18 140.6 17.8 261 479-769 1-271 (272)
76 PRK10349 carboxylesterase BioH 99.6 3.5E-14 7.7E-19 143.4 14.1 238 501-786 13-254 (256)
77 PRK03592 haloalkane dehalogena 99.6 2.8E-13 6E-18 139.9 21.0 267 479-788 15-289 (295)
78 PF12695 Abhydrolase_5: Alpha/ 99.6 1.1E-13 2.4E-18 126.3 15.9 145 503-769 1-145 (145)
79 TIGR01738 bioH putative pimelo 99.6 9.4E-14 2E-18 139.3 16.8 238 501-785 4-245 (245)
80 COG0429 Predicted hydrolase of 99.6 2E-13 4.3E-18 132.1 17.9 281 471-789 50-341 (345)
81 PF02230 Abhydrolase_2: Phosph 99.5 1.5E-13 3.2E-18 134.0 16.1 192 498-789 11-216 (216)
82 PLN02679 hydrolase, alpha/beta 99.5 5E-13 1.1E-17 141.1 21.0 253 501-787 88-356 (360)
83 TIGR01249 pro_imino_pep_1 prol 99.5 4.3E-13 9.3E-18 138.8 20.0 123 474-620 8-130 (306)
84 PRK10673 acyl-CoA esterase; Pr 99.5 1.8E-13 3.9E-18 138.3 16.8 233 499-787 14-254 (255)
85 PRK11071 esterase YqiA; Provis 99.5 2.1E-13 4.5E-18 129.0 16.1 186 502-786 2-189 (190)
86 TIGR03100 hydr1_PEP hydrolase, 99.5 4E-13 8.7E-18 136.1 19.0 261 472-787 4-274 (274)
87 TIGR01250 pro_imino_pep_2 prol 99.5 6E-13 1.3E-17 137.1 20.2 255 501-786 25-288 (288)
88 PLN02872 triacylglycerol lipas 99.5 1.1E-13 2.3E-18 145.2 14.5 298 469-789 43-390 (395)
89 PF10503 Esterase_phd: Esteras 99.5 4.1E-13 9E-18 127.3 16.9 129 483-620 1-132 (220)
90 PRK07581 hypothetical protein; 99.5 2.9E-13 6.4E-18 142.5 17.5 68 718-790 269-338 (339)
91 PF06500 DUF1100: Alpha/beta h 99.5 4.1E-13 9E-18 136.7 17.4 246 467-789 162-410 (411)
92 PF07859 Abhydrolase_3: alpha/ 99.5 1.2E-13 2.6E-18 134.8 12.9 202 504-771 1-210 (211)
93 TIGR03695 menH_SHCHC 2-succiny 99.5 6.5E-13 1.4E-17 133.6 17.9 248 502-786 2-251 (251)
94 KOG4409|consensus 99.5 5.7E-13 1.2E-17 129.7 16.4 281 475-788 70-364 (365)
95 TIGR01392 homoserO_Ac_trn homo 99.5 1.1E-12 2.4E-17 138.5 20.1 68 718-786 282-351 (351)
96 PRK14875 acetoin dehydrogenase 99.5 3.5E-13 7.5E-18 144.5 16.5 240 501-788 131-371 (371)
97 PRK03204 haloalkane dehalogena 99.5 3.9E-13 8.5E-18 137.4 16.1 101 502-619 35-135 (286)
98 PRK00175 metX homoserine O-ace 99.5 1.2E-12 2.7E-17 139.0 19.2 70 718-788 303-374 (379)
99 PRK11126 2-succinyl-6-hydroxy- 99.5 3.7E-13 7.9E-18 134.8 13.9 100 502-620 3-102 (242)
100 PLN02894 hydrolase, alpha/beta 99.5 3.4E-12 7.3E-17 136.1 21.7 68 717-789 318-386 (402)
101 PF00930 DPPIV_N: Dipeptidyl p 99.5 7.4E-13 1.6E-17 139.3 16.4 213 1-261 94-342 (353)
102 PLN02578 hydrolase 99.5 7.7E-13 1.7E-17 139.6 16.5 63 718-786 290-353 (354)
103 KOG4667|consensus 99.5 1.2E-12 2.5E-17 117.2 13.5 239 471-785 11-255 (269)
104 PF12715 Abhydrolase_7: Abhydr 99.5 3E-13 6.5E-18 134.8 10.9 144 469-619 87-259 (390)
105 COG4099 Predicted peptidase [G 99.4 1.8E-12 3.9E-17 121.7 14.8 179 478-764 169-354 (387)
106 PF12697 Abhydrolase_6: Alpha/ 99.4 5.8E-13 1.3E-17 131.7 12.4 221 504-779 1-227 (228)
107 COG0400 Predicted esterase [Ge 99.4 3.4E-12 7.4E-17 119.7 16.1 185 498-789 15-206 (207)
108 PLN02211 methyl indole-3-aceta 99.4 8.7E-12 1.9E-16 126.1 20.4 247 499-787 16-269 (273)
109 COG4946 Uncharacterized protei 99.4 1.4E-10 2.9E-15 115.4 27.8 127 273-434 384-510 (668)
110 PLN00021 chlorophyllase 99.4 7.2E-12 1.6E-16 127.5 18.6 120 481-621 37-167 (313)
111 PLN03084 alpha/beta hydrolase 99.4 5.1E-12 1.1E-16 132.5 17.9 263 479-787 113-383 (383)
112 KOG1838|consensus 99.4 3E-11 6.4E-16 122.1 21.3 282 470-787 93-387 (409)
113 KOG1454|consensus 99.4 9.2E-12 2E-16 127.5 17.9 256 499-789 56-325 (326)
114 PRK08775 homoserine O-acetyltr 99.4 5E-12 1.1E-16 133.0 16.4 65 720-788 273-339 (343)
115 TIGR01836 PHA_synth_III_C poly 99.4 5E-12 1.1E-16 133.3 15.9 111 503-623 64-174 (350)
116 TIGR03101 hydr2_PEP hydrolase, 99.4 3.4E-11 7.3E-16 119.0 18.7 136 473-624 3-138 (266)
117 PRK10115 protease 2; Provision 99.3 9.7E-09 2.1E-13 116.5 39.4 119 258-403 280-403 (686)
118 PF14583 Pectate_lyase22: Olig 99.3 1.5E-09 3.2E-14 109.4 27.4 315 12-393 40-384 (386)
119 PF08840 BAAT_C: BAAT / Acyl-C 99.3 2.1E-11 4.6E-16 117.3 12.5 177 564-790 3-212 (213)
120 PLN02980 2-oxoglutarate decarb 99.3 8.4E-11 1.8E-15 145.4 19.9 260 500-788 1370-1639(1655)
121 PRK06765 homoserine O-acetyltr 99.3 9.8E-11 2.1E-15 123.1 17.0 71 716-787 315-387 (389)
122 COG3509 LpqC Poly(3-hydroxybut 99.3 2.1E-10 4.5E-15 109.3 15.9 134 479-620 43-179 (312)
123 KOG2984|consensus 99.2 3.2E-11 6.9E-16 106.7 7.9 245 479-787 29-275 (277)
124 KOG3043|consensus 99.2 4.1E-10 8.9E-15 102.5 14.9 166 525-790 59-242 (242)
125 TIGR03866 PQQ_ABC_repeats PQQ- 99.2 3.2E-08 7E-13 102.5 31.6 241 113-448 35-282 (300)
126 PRK05855 short chain dehydroge 99.2 2.2E-10 4.7E-15 131.1 15.5 62 721-788 230-292 (582)
127 TIGR01838 PHA_synth_I poly(R)- 99.2 4.5E-10 9.8E-15 121.3 16.6 128 482-623 173-305 (532)
128 PRK10439 enterobactin/ferric e 99.1 2.5E-09 5.4E-14 113.2 18.7 206 470-771 180-393 (411)
129 COG2936 Predicted acyl esteras 99.1 1.6E-09 3.4E-14 114.7 16.8 139 471-622 20-161 (563)
130 KOG2564|consensus 99.1 1.3E-09 2.8E-14 102.2 14.2 117 470-604 50-166 (343)
131 PF00561 Abhydrolase_1: alpha/ 99.1 3.9E-11 8.5E-16 119.0 3.8 224 534-781 1-228 (230)
132 PF03583 LIP: Secretory lipase 99.1 1E-09 2.2E-14 110.9 13.0 64 725-790 219-283 (290)
133 KOG4627|consensus 99.1 1.4E-09 3.1E-14 96.8 11.3 227 462-785 37-268 (270)
134 KOG2382|consensus 99.1 3E-09 6.6E-14 104.0 14.7 61 725-789 253-314 (315)
135 PRK07868 acyl-CoA synthetase; 99.0 5.4E-09 1.2E-13 125.2 18.3 65 719-788 292-361 (994)
136 KOG0271|consensus 99.0 4.5E-08 9.8E-13 95.3 20.6 104 244-374 365-468 (480)
137 PF10282 Lactonase: Lactonase, 99.0 1.8E-06 4E-11 90.6 33.6 185 246-452 143-331 (345)
138 PF12740 Chlorophyllase2: Chlo 99.0 1.2E-08 2.5E-13 98.2 15.1 115 486-621 7-132 (259)
139 PF08538 DUF1749: Protein of u 99.0 1.7E-08 3.8E-13 98.8 15.3 251 501-786 33-303 (303)
140 KOG1407|consensus 98.9 1E-06 2.3E-11 81.7 24.3 274 7-378 20-293 (313)
141 PF00756 Esterase: Putative es 98.9 2.8E-09 6.1E-14 107.1 8.5 136 480-622 5-152 (251)
142 KOG2624|consensus 98.9 3E-08 6.5E-13 102.5 15.7 300 469-788 47-398 (403)
143 KOG0318|consensus 98.9 6.1E-06 1.3E-10 84.2 31.3 112 301-446 448-561 (603)
144 PF03403 PAF-AH_p_II: Platelet 98.9 3E-08 6.5E-13 103.8 14.8 115 498-619 97-261 (379)
145 PF05728 UPF0227: Uncharacteri 98.9 4.9E-08 1.1E-12 90.7 14.6 53 725-785 134-186 (187)
146 COG4757 Predicted alpha/beta h 98.9 2.1E-08 4.6E-13 91.5 11.6 262 473-785 8-280 (281)
147 PF08662 eIF2A: Eukaryotic tra 98.9 2.9E-07 6.3E-12 87.2 19.9 166 249-451 8-185 (194)
148 cd00200 WD40 WD40 domain, foun 98.9 2.9E-06 6.3E-11 86.6 28.9 221 115-430 58-279 (289)
149 KOG3101|consensus 98.9 2.3E-08 5E-13 89.5 10.8 135 481-623 26-179 (283)
150 PF02897 Peptidase_S9_N: Proly 98.8 2.2E-06 4.7E-11 93.1 28.4 276 113-453 128-412 (414)
151 PF06342 DUF1057: Alpha/beta h 98.8 3.9E-07 8.5E-12 87.1 18.9 104 499-619 33-136 (297)
152 KOG2096|consensus 98.8 1.4E-06 3.1E-11 83.1 21.8 150 247-430 229-391 (420)
153 TIGR03866 PQQ_ABC_repeats PQQ- 98.8 4.9E-06 1.1E-10 86.1 27.6 250 10-342 33-282 (300)
154 KOG0293|consensus 98.8 4.1E-07 8.8E-12 89.6 17.5 155 248-446 271-426 (519)
155 KOG0271|consensus 98.8 1.5E-06 3.2E-11 85.0 21.0 98 299-428 370-467 (480)
156 KOG0318|consensus 98.8 1.3E-05 2.7E-10 82.0 28.1 148 247-434 191-341 (603)
157 COG2706 3-carboxymuconate cycl 98.8 3.7E-05 7.9E-10 75.6 30.2 175 249-453 147-331 (346)
158 KOG0315|consensus 98.8 1.1E-05 2.3E-10 74.7 24.8 254 82-433 19-279 (311)
159 PF06821 Ser_hydrolase: Serine 98.7 2.5E-07 5.5E-12 85.1 14.1 156 504-772 1-156 (171)
160 PRK13616 lipoprotein LpqB; Pro 98.7 9.5E-07 2.1E-11 97.6 20.9 78 248-342 449-530 (591)
161 COG4188 Predicted dienelactone 98.7 1.3E-07 2.7E-12 94.5 12.5 122 480-606 49-181 (365)
162 COG0596 MhpC Predicted hydrola 98.7 7.7E-07 1.7E-11 90.1 18.7 101 501-620 21-123 (282)
163 TIGR01839 PHA_synth_II poly(R) 98.7 3.4E-07 7.3E-12 97.9 16.1 89 524-623 239-331 (560)
164 KOG2112|consensus 98.7 5.5E-07 1.2E-11 82.1 14.6 60 725-787 144-203 (206)
165 COG2021 MET2 Homoserine acetyl 98.7 4.2E-07 9.2E-12 90.5 14.9 271 499-787 49-367 (368)
166 PRK13616 lipoprotein LpqB; Pro 98.7 7.8E-07 1.7E-11 98.3 18.7 118 249-393 399-528 (591)
167 KOG0291|consensus 98.7 8.1E-05 1.7E-09 79.6 31.8 146 247-430 351-496 (893)
168 TIGR02658 TTQ_MADH_Hv methylam 98.7 3.2E-05 7E-10 79.2 28.4 124 301-449 198-334 (352)
169 PF02273 Acyl_transf_2: Acyl t 98.7 2.4E-06 5.3E-11 79.1 18.0 234 473-772 5-240 (294)
170 KOG0293|consensus 98.6 1.8E-06 4E-11 85.2 17.7 284 11-388 228-511 (519)
171 KOG0291|consensus 98.6 2.2E-05 4.7E-10 83.8 26.3 240 11-339 311-550 (893)
172 PF08662 eIF2A: Eukaryotic tra 98.6 1.8E-06 3.9E-11 81.9 17.0 106 246-378 59-164 (194)
173 cd00312 Esterase_lipase Estera 98.6 8.2E-08 1.8E-12 106.8 9.1 130 483-621 79-214 (493)
174 PF10282 Lactonase: Lactonase, 98.6 1.6E-05 3.4E-10 83.6 25.6 277 8-342 37-327 (345)
175 PF02239 Cytochrom_D1: Cytochr 98.6 4.6E-05 1E-09 80.0 28.8 253 114-449 83-351 (369)
176 COG3208 GrsT Predicted thioest 98.6 4.3E-07 9.3E-12 85.2 12.0 60 722-786 174-234 (244)
177 KOG0315|consensus 98.6 1.4E-05 2.9E-10 74.0 21.1 247 10-342 43-291 (311)
178 KOG2314|consensus 98.6 4.7E-05 1E-09 78.4 26.9 170 249-445 349-525 (698)
179 cd00707 Pancreat_lipase_like P 98.6 2.3E-07 5E-12 93.4 10.6 114 499-620 34-147 (275)
180 KOG0286|consensus 98.6 2.9E-05 6.3E-10 73.6 23.4 159 244-444 143-302 (343)
181 KOG1446|consensus 98.6 4.2E-05 9E-10 73.6 24.8 150 172-378 143-294 (311)
182 COG2382 Fes Enterochelin ester 98.6 1.7E-06 3.7E-11 83.9 15.6 131 481-623 80-215 (299)
183 COG3571 Predicted hydrolase of 98.6 4.1E-06 8.9E-11 71.9 16.0 105 501-616 14-120 (213)
184 KOG0973|consensus 98.6 6.4E-06 1.4E-10 91.5 21.2 113 6-127 68-190 (942)
185 PF09752 DUF2048: Uncharacteri 98.6 2.8E-06 6E-11 84.8 16.7 256 482-786 76-347 (348)
186 PF02897 Peptidase_S9_N: Proly 98.6 5E-05 1.1E-09 82.5 28.4 234 164-451 117-364 (414)
187 PRK11028 6-phosphogluconolacto 98.6 6.1E-05 1.3E-09 79.0 27.9 252 8-316 35-292 (330)
188 PRK11028 6-phosphogluconolacto 98.5 0.00026 5.7E-09 74.2 32.5 124 250-393 178-307 (330)
189 KOG0273|consensus 98.5 5.1E-05 1.1E-09 76.6 24.8 264 9-379 237-515 (524)
190 cd00200 WD40 WD40 domain, foun 98.5 6E-05 1.3E-09 76.7 27.0 237 113-447 14-251 (289)
191 KOG0272|consensus 98.5 7.5E-06 1.6E-10 81.3 18.6 149 244-431 301-449 (459)
192 KOG2055|consensus 98.5 1.7E-05 3.6E-10 79.8 21.1 233 113-430 262-500 (514)
193 COG5354 Uncharacterized protei 98.5 4.3E-05 9.2E-10 78.1 23.9 337 9-446 34-396 (561)
194 TIGR02658 TTQ_MADH_Hv methylam 98.5 4.4E-05 9.5E-10 78.2 24.5 121 252-393 199-331 (352)
195 COG2706 3-carboxymuconate cycl 98.5 0.00019 4.1E-09 70.8 27.3 280 6-342 38-326 (346)
196 KOG1407|consensus 98.5 2.4E-05 5.3E-10 72.9 19.7 102 301-435 194-295 (313)
197 KOG0279|consensus 98.5 0.00042 9.2E-09 65.6 28.0 291 10-389 18-312 (315)
198 PF07224 Chlorophyllase: Chlor 98.5 4.1E-07 8.8E-12 85.2 8.2 117 484-621 34-158 (307)
199 KOG2055|consensus 98.5 6.6E-06 1.4E-10 82.6 17.1 189 203-445 279-467 (514)
200 COG0627 Predicted esterase [Ge 98.5 2.1E-06 4.6E-11 86.6 13.9 230 497-789 50-312 (316)
201 KOG2315|consensus 98.5 0.00016 3.4E-09 75.0 27.2 164 249-450 220-395 (566)
202 COG2272 PnbA Carboxylesterase 98.5 9.8E-07 2.1E-11 91.3 10.8 129 483-620 80-217 (491)
203 PF08450 SGL: SMP-30/Gluconola 98.5 0.00022 4.8E-09 71.2 27.6 233 113-431 4-244 (246)
204 KOG2281|consensus 98.5 9.6E-05 2.1E-09 78.0 25.0 192 7-215 264-542 (867)
205 KOG2551|consensus 98.4 5.9E-06 1.3E-10 75.9 14.2 62 721-789 160-221 (230)
206 TIGR03230 lipo_lipase lipoprot 98.4 1.4E-06 2.9E-11 91.8 11.6 113 500-619 40-153 (442)
207 PF00135 COesterase: Carboxyle 98.4 4.7E-07 1E-11 102.4 8.7 132 483-619 109-244 (535)
208 KOG0279|consensus 98.4 0.00019 4.2E-09 67.8 23.6 181 204-449 85-266 (315)
209 PF08450 SGL: SMP-30/Gluconola 98.4 0.00063 1.4E-08 67.9 29.6 230 175-484 5-241 (246)
210 PF11144 DUF2920: Protein of u 98.4 3.2E-05 7E-10 78.9 19.6 171 559-764 158-332 (403)
211 KOG3847|consensus 98.4 4.6E-06 9.9E-11 80.0 11.8 115 498-619 115-274 (399)
212 PF03959 FSH1: Serine hydrolas 98.3 2.4E-06 5.2E-11 82.6 9.4 46 722-772 159-204 (212)
213 COG2819 Predicted hydrolase of 98.3 5.4E-05 1.2E-09 72.7 18.2 42 580-622 133-174 (264)
214 COG1506 DAP2 Dipeptidyl aminop 98.3 0.00047 1E-08 78.3 29.1 53 642-695 534-586 (620)
215 KOG0266|consensus 98.3 0.00042 9.2E-09 75.7 27.4 226 114-430 209-440 (456)
216 PF02239 Cytochrom_D1: Cytochr 98.3 0.00023 5E-09 74.8 23.1 186 204-451 16-208 (369)
217 PF10340 DUF2424: Protein of u 98.3 9.4E-05 2E-09 75.5 19.3 123 484-623 107-238 (374)
218 PTZ00472 serine carboxypeptida 98.2 3.2E-05 7E-10 83.6 16.7 137 480-623 60-219 (462)
219 KOG4497|consensus 98.2 0.00018 3.8E-09 69.5 19.3 100 299-430 321-420 (447)
220 KOG1446|consensus 98.2 0.0025 5.5E-08 61.7 27.0 166 244-448 98-265 (311)
221 PTZ00421 coronin; Provisional 98.2 0.0017 3.8E-08 70.9 29.3 168 247-449 126-294 (493)
222 TIGR01849 PHB_depoly_PhaZ poly 98.2 4.8E-05 1E-09 79.3 15.6 69 719-788 332-406 (406)
223 KOG0266|consensus 98.2 0.00043 9.4E-09 75.6 24.0 164 244-447 244-411 (456)
224 KOG0973|consensus 98.2 0.00016 3.5E-09 80.7 20.3 184 244-460 67-279 (942)
225 PRK04940 hypothetical protein; 98.1 9E-05 1.9E-09 67.4 13.8 55 726-787 125-179 (180)
226 PTZ00420 coronin; Provisional 98.1 0.0015 3.3E-08 71.9 25.3 121 249-393 170-294 (568)
227 PLN00181 protein SPA1-RELATED; 98.1 0.0044 9.6E-08 73.3 31.3 153 248-431 619-782 (793)
228 KOG0272|consensus 98.0 0.00019 4.1E-09 71.6 16.0 152 244-435 259-410 (459)
229 KOG0772|consensus 98.0 0.00035 7.6E-09 71.6 18.1 278 118-446 164-446 (641)
230 KOG4497|consensus 98.0 0.00036 7.8E-09 67.4 16.6 108 244-378 316-423 (447)
231 KOG0273|consensus 98.0 0.0025 5.5E-08 64.8 23.3 148 244-434 357-515 (524)
232 PTZ00420 coronin; Provisional 98.0 0.0096 2.1E-07 65.7 29.2 121 244-392 123-248 (568)
233 KOG0275|consensus 98.0 0.00019 4.1E-09 68.9 13.9 124 244-399 346-472 (508)
234 TIGR02171 Fb_sc_TIGR02171 Fibr 97.9 0.00041 9E-09 77.6 18.2 227 84-355 330-597 (912)
235 PF07676 PD40: WD40-like Beta 97.9 1.1E-05 2.4E-10 53.7 3.9 29 8-36 9-39 (39)
236 COG1073 Hydrolases of the alph 97.9 0.00047 1E-08 71.1 18.0 74 715-790 222-299 (299)
237 KOG2100|consensus 97.9 0.00056 1.2E-08 78.5 19.8 193 1-215 200-425 (755)
238 KOG1553|consensus 97.9 7.8E-05 1.7E-09 72.5 10.8 133 471-623 215-348 (517)
239 KOG0305|consensus 97.9 0.00097 2.1E-08 70.5 19.7 117 246-389 343-460 (484)
240 TIGR03502 lipase_Pla1_cef extr 97.9 7E-05 1.5E-09 84.3 10.8 101 499-604 447-575 (792)
241 KOG2139|consensus 97.9 0.00063 1.4E-08 66.7 15.8 161 244-435 193-368 (445)
242 KOG1445|consensus 97.9 0.00014 3.1E-09 76.0 12.1 123 244-391 718-843 (1012)
243 KOG0263|consensus 97.9 0.00042 9.2E-09 74.8 15.8 109 249-387 538-646 (707)
244 KOG3253|consensus 97.9 0.00023 5.1E-09 74.7 13.4 51 718-772 298-348 (784)
245 KOG1274|consensus 97.8 0.0042 9.1E-08 68.6 23.1 160 246-446 96-263 (933)
246 PF06433 Me-amine-dh_H: Methyl 97.8 0.031 6.7E-07 56.3 27.3 248 78-393 62-321 (342)
247 PF06028 DUF915: Alpha/beta hy 97.8 0.00043 9.4E-09 67.9 14.3 61 725-785 184-252 (255)
248 KOG2919|consensus 97.8 0.0024 5.1E-08 61.9 18.3 79 244-340 248-328 (406)
249 PF12146 Hydrolase_4: Putative 97.8 7.2E-05 1.6E-09 58.6 6.8 58 480-548 1-58 (79)
250 PF11339 DUF3141: Protein of u 97.8 0.0032 6.8E-08 65.9 20.3 78 532-624 99-180 (581)
251 PF05677 DUF818: Chlamydia CHL 97.8 0.00028 6E-09 69.8 12.1 127 467-606 109-237 (365)
252 KOG0284|consensus 97.8 0.00045 9.7E-09 68.8 13.4 264 9-378 98-371 (464)
253 PF06057 VirJ: Bacterial virul 97.8 0.00056 1.2E-08 62.4 12.9 81 527-619 23-106 (192)
254 KOG0265|consensus 97.8 0.043 9.2E-07 53.0 25.6 148 245-431 173-327 (338)
255 KOG2314|consensus 97.7 0.014 2.9E-07 61.0 23.6 206 111-378 349-558 (698)
256 PF07433 DUF1513: Protein of u 97.7 0.0099 2.2E-07 59.0 21.8 211 204-451 28-253 (305)
257 COG3386 Gluconolactonase [Carb 97.7 0.025 5.3E-07 57.5 25.2 104 273-392 87-193 (307)
258 PF07519 Tannase: Tannase and 97.7 0.0049 1.1E-07 66.9 21.3 133 481-624 15-154 (474)
259 KOG1274|consensus 97.7 0.021 4.6E-07 63.3 25.5 188 114-378 102-291 (933)
260 COG3243 PhaC Poly(3-hydroxyalk 97.7 0.00036 7.8E-09 71.0 11.3 88 527-623 133-220 (445)
261 PF10230 DUF2305: Uncharacteri 97.7 0.00027 5.8E-09 70.8 10.2 113 501-620 2-122 (266)
262 PF10647 Gmad1: Lipoprotein Lp 97.6 0.0031 6.6E-08 62.7 17.5 109 9-131 25-134 (253)
263 KOG0296|consensus 97.6 0.0042 9.1E-08 61.2 17.5 81 273-379 310-390 (399)
264 COG1770 PtrB Protease II [Amin 97.6 0.15 3.2E-06 55.5 41.1 204 202-458 153-361 (682)
265 KOG0772|consensus 97.6 0.0039 8.4E-08 64.2 17.9 122 246-388 364-485 (641)
266 COG5354 Uncharacterized protei 97.6 0.022 4.7E-07 59.0 23.1 195 114-375 179-377 (561)
267 COG3545 Predicted esterase of 97.6 0.0019 4E-08 57.6 13.3 59 725-788 117-179 (181)
268 PTZ00421 coronin; Provisional 97.6 0.0066 1.4E-07 66.4 20.7 166 244-446 73-246 (493)
269 KOG2139|consensus 97.6 0.0042 9.1E-08 61.2 16.6 113 298-444 197-310 (445)
270 KOG0645|consensus 97.6 0.0091 2E-07 56.6 18.1 154 246-431 61-214 (312)
271 KOG1282|consensus 97.6 0.0026 5.7E-08 67.3 16.3 139 478-623 54-216 (454)
272 KOG2096|consensus 97.6 0.024 5.1E-07 55.1 20.9 156 250-431 191-350 (420)
273 PLN02919 haloacid dehalogenase 97.5 0.06 1.3E-06 64.9 29.4 170 250-449 686-892 (1057)
274 KOG0305|consensus 97.5 0.036 7.9E-07 58.9 24.1 155 244-435 299-454 (484)
275 KOG0286|consensus 97.5 0.081 1.8E-06 51.0 23.6 161 246-446 97-260 (343)
276 PF10647 Gmad1: Lipoprotein Lp 97.5 0.01 2.3E-07 58.9 19.0 175 247-449 24-201 (253)
277 PLN00181 protein SPA1-RELATED; 97.5 0.05 1.1E-06 64.5 28.1 165 244-446 573-739 (793)
278 PF10142 PhoPQ_related: PhoPQ- 97.5 0.0014 3E-08 67.6 12.9 68 715-788 253-320 (367)
279 PF05705 DUF829: Eukaryotic pr 97.5 0.002 4.4E-08 63.9 13.7 61 725-785 178-240 (240)
280 PF03096 Ndr: Ndr family; Int 97.5 0.0015 3.3E-08 63.9 12.2 244 499-787 21-278 (283)
281 KOG1516|consensus 97.5 0.00041 9E-09 78.3 9.7 130 483-619 97-231 (545)
282 KOG2048|consensus 97.5 0.058 1.3E-06 57.9 24.1 176 244-454 380-557 (691)
283 KOG0265|consensus 97.4 0.027 5.7E-07 54.4 19.5 246 114-449 53-300 (338)
284 PF00151 Lipase: Lipase; Inte 97.4 0.0003 6.5E-09 72.3 7.4 115 499-619 69-186 (331)
285 KOG2394|consensus 97.4 0.013 2.9E-07 60.8 18.6 69 299-389 293-361 (636)
286 KOG0275|consensus 97.4 0.011 2.3E-07 57.2 16.8 167 244-448 304-470 (508)
287 KOG0283|consensus 97.4 0.042 9E-07 60.5 23.1 164 245-446 408-577 (712)
288 COG3150 Predicted esterase [Ge 97.4 0.0034 7.3E-08 55.1 12.0 51 728-786 137-187 (191)
289 KOG0645|consensus 97.4 0.028 6.1E-07 53.4 18.7 22 8-29 62-83 (312)
290 KOG0282|consensus 97.4 0.017 3.8E-07 59.2 18.3 274 10-378 217-495 (503)
291 COG4947 Uncharacterized protei 97.3 0.00066 1.4E-08 59.3 6.1 127 568-768 88-214 (227)
292 KOG1445|consensus 97.3 0.017 3.6E-07 61.2 17.2 144 202-391 650-797 (1012)
293 TIGR02171 Fb_sc_TIGR02171 Fibr 97.2 0.0057 1.2E-07 68.8 14.6 33 9-41 351-386 (912)
294 PF07819 PGAP1: PGAP1-like pro 97.2 0.0026 5.7E-08 61.8 10.5 104 502-618 5-121 (225)
295 KOG1273|consensus 97.2 0.26 5.7E-06 48.1 23.4 252 115-452 30-287 (405)
296 PF12048 DUF3530: Protein of u 97.2 0.042 9.1E-07 56.2 19.3 129 480-618 70-227 (310)
297 KOG0263|consensus 97.2 0.0085 1.9E-07 65.1 14.6 162 244-449 449-611 (707)
298 PF06433 Me-amine-dh_H: Methyl 97.1 0.36 7.8E-06 48.9 25.0 127 299-450 186-325 (342)
299 PLN02209 serine carboxypeptida 97.1 0.023 5E-07 60.9 17.4 63 725-787 351-434 (437)
300 KOG0319|consensus 97.1 0.32 7E-06 53.0 25.2 322 13-447 25-356 (775)
301 KOG0640|consensus 97.1 0.037 8.1E-07 53.5 16.4 77 246-342 261-338 (430)
302 PF05577 Peptidase_S28: Serine 97.1 0.0025 5.5E-08 69.4 10.2 117 501-621 29-149 (434)
303 PLN03016 sinapoylglucose-malat 97.1 0.039 8.6E-07 59.2 18.5 63 725-787 347-430 (433)
304 KOG2315|consensus 97.0 0.016 3.6E-07 60.6 14.8 152 175-378 223-375 (566)
305 KOG0289|consensus 97.0 0.5 1.1E-05 48.3 23.8 164 246-449 303-466 (506)
306 PF08386 Abhydrolase_4: TAP-li 97.0 0.0015 3.3E-08 54.5 5.5 59 725-787 34-93 (103)
307 KOG2919|consensus 97.0 0.082 1.8E-06 51.7 17.6 158 256-446 121-282 (406)
308 KOG0295|consensus 97.0 0.16 3.4E-06 50.6 19.7 162 244-447 191-366 (406)
309 PF07433 DUF1513: Protein of u 96.9 0.43 9.2E-06 47.7 22.7 188 250-466 8-219 (305)
310 KOG0296|consensus 96.9 0.058 1.3E-06 53.5 16.3 166 245-453 63-229 (399)
311 KOG4840|consensus 96.9 0.02 4.3E-07 52.8 12.3 109 502-623 37-147 (299)
312 PF01674 Lipase_2: Lipase (cla 96.9 0.0034 7.4E-08 60.0 7.8 90 504-605 4-96 (219)
313 KOG3975|consensus 96.9 0.13 2.7E-06 48.8 17.4 58 725-785 242-300 (301)
314 KOG1273|consensus 96.8 0.26 5.6E-06 48.2 19.7 157 244-439 63-223 (405)
315 KOG2931|consensus 96.8 0.047 1E-06 53.0 14.8 248 499-787 44-305 (326)
316 PF07676 PD40: WD40-like Beta 96.8 0.003 6.6E-08 41.8 4.6 32 244-275 6-39 (39)
317 KOG0771|consensus 96.7 0.042 9E-07 55.6 14.3 65 244-316 279-343 (398)
318 KOG2110|consensus 96.7 0.17 3.7E-06 50.5 18.1 121 246-392 129-250 (391)
319 KOG0284|consensus 96.5 0.052 1.1E-06 54.6 13.1 159 244-445 136-294 (464)
320 PF00450 Peptidase_S10: Serine 96.5 0.021 4.5E-07 62.2 11.6 139 479-623 22-184 (415)
321 KOG4389|consensus 96.4 0.0047 1E-07 63.8 5.6 129 483-620 121-255 (601)
322 KOG0278|consensus 96.4 0.085 1.8E-06 49.6 12.8 115 246-393 184-300 (334)
323 KOG2183|consensus 96.4 0.012 2.6E-07 59.6 7.8 97 523-621 101-204 (492)
324 KOG0639|consensus 96.3 0.065 1.4E-06 55.3 12.8 221 115-430 472-692 (705)
325 COG3386 Gluconolactonase [Carb 96.3 0.11 2.3E-06 52.9 14.2 154 250-445 28-193 (307)
326 KOG2394|consensus 96.2 0.034 7.4E-07 57.9 10.3 64 244-316 288-351 (636)
327 PLN02919 haloacid dehalogenase 96.2 0.81 1.7E-05 55.5 23.4 120 250-393 627-771 (1057)
328 KOG0650|consensus 96.1 0.22 4.7E-06 52.9 15.7 117 246-392 521-637 (733)
329 PLN02733 phosphatidylcholine-s 96.1 0.011 2.4E-07 63.1 6.5 85 525-619 113-200 (440)
330 KOG0771|consensus 96.1 0.089 1.9E-06 53.3 12.1 154 245-430 185-342 (398)
331 KOG0288|consensus 96.0 0.11 2.3E-06 52.6 12.3 109 246-377 341-451 (459)
332 KOG2106|consensus 96.0 2.5 5.4E-05 44.4 22.1 99 249-374 410-508 (626)
333 PF00975 Thioesterase: Thioest 96.0 0.02 4.4E-07 56.3 7.6 98 503-618 2-102 (229)
334 PRK02888 nitrous-oxide reducta 95.9 0.7 1.5E-05 50.9 18.8 67 253-342 283-354 (635)
335 KOG0264|consensus 95.8 0.46 1E-05 48.8 16.2 158 250-445 181-347 (422)
336 KOG0306|consensus 95.8 0.93 2E-05 49.8 18.9 153 246-435 373-531 (888)
337 KOG0643|consensus 95.8 2 4.3E-05 41.3 18.8 163 244-448 8-180 (327)
338 COG3490 Uncharacterized protei 95.6 0.99 2.1E-05 43.8 16.4 189 251-466 72-282 (366)
339 COG3391 Uncharacterized conser 95.6 1.4 3E-05 47.0 20.0 164 249-449 118-287 (381)
340 KOG1524|consensus 95.6 0.25 5.5E-06 51.7 13.4 144 245-432 103-247 (737)
341 PF04762 IKI3: IKI3 family; I 95.6 0.22 4.8E-06 59.0 14.9 68 247-316 257-324 (928)
342 PF05990 DUF900: Alpha/beta hy 95.5 0.045 9.8E-07 53.5 7.7 96 499-604 16-113 (233)
343 KOG0306|consensus 95.5 5.2 0.00011 44.3 26.3 159 244-435 452-614 (888)
344 KOG0643|consensus 95.5 0.94 2E-05 43.4 15.6 135 273-434 76-212 (327)
345 KOG2106|consensus 95.4 4.2 9.1E-05 42.8 26.8 98 299-429 410-508 (626)
346 KOG2182|consensus 95.4 0.086 1.9E-06 55.3 9.4 116 499-619 84-206 (514)
347 KOG0264|consensus 95.4 2.2 4.8E-05 44.0 19.0 166 244-440 225-401 (422)
348 KOG3967|consensus 95.4 0.11 2.5E-06 47.5 8.9 100 499-608 99-214 (297)
349 PF04762 IKI3: IKI3 family; I 95.4 6.6 0.00014 47.0 26.0 114 299-433 212-325 (928)
350 KOG2565|consensus 95.3 0.1 2.2E-06 52.4 9.3 113 479-608 132-253 (469)
351 COG4814 Uncharacterized protei 95.3 0.29 6.4E-06 46.6 11.7 62 725-786 216-285 (288)
352 KOG4378|consensus 95.3 1.1 2.3E-05 46.7 16.5 157 249-447 124-282 (673)
353 KOG2110|consensus 95.3 0.39 8.4E-06 48.1 13.0 138 273-445 108-248 (391)
354 KOG0282|consensus 95.3 0.098 2.1E-06 53.9 9.2 144 246-430 258-403 (503)
355 KOG4388|consensus 95.2 0.031 6.7E-07 59.0 5.4 91 500-603 395-488 (880)
356 KOG0639|consensus 95.0 0.21 4.5E-06 51.8 10.7 138 249-430 512-651 (705)
357 KOG0319|consensus 95.0 4.7 0.0001 44.5 21.1 329 5-435 190-527 (775)
358 KOG0295|consensus 95.0 1.3 2.8E-05 44.4 15.4 135 204-389 215-363 (406)
359 KOG1920|consensus 94.9 11 0.00023 44.5 26.3 125 299-446 198-323 (1265)
360 KOG0278|consensus 94.9 2.5 5.5E-05 40.2 16.2 141 244-427 141-282 (334)
361 KOG1009|consensus 94.8 0.27 5.9E-06 49.7 10.7 113 244-378 63-186 (434)
362 KOG2048|consensus 94.7 2.6 5.6E-05 45.9 18.1 117 249-393 431-549 (691)
363 COG3391 Uncharacterized conser 94.7 3.9 8.5E-05 43.6 20.1 203 115-393 80-284 (381)
364 KOG1524|consensus 94.6 1.1 2.3E-05 47.3 14.5 93 300-427 108-201 (737)
365 KOG0310|consensus 94.6 5.3 0.00012 41.8 19.3 148 244-432 151-299 (487)
366 KOG1007|consensus 94.6 1.4 3E-05 42.8 14.1 151 247-433 124-279 (370)
367 KOG0640|consensus 94.6 1.7 3.6E-05 42.6 14.7 118 246-390 216-335 (430)
368 KOG1539|consensus 94.4 0.25 5.4E-06 54.6 10.0 63 244-316 574-636 (910)
369 KOG0310|consensus 94.4 2.1 4.5E-05 44.7 15.9 159 244-446 66-226 (487)
370 PF11187 DUF2974: Protein of u 94.3 0.15 3.3E-06 49.2 7.6 52 566-618 67-121 (224)
371 COG4287 PqaA PhoPQ-activated p 94.1 0.078 1.7E-06 52.9 5.0 61 721-785 326-387 (507)
372 KOG1551|consensus 93.9 0.14 3E-06 48.7 6.1 55 728-787 309-365 (371)
373 KOG1332|consensus 93.9 6.1 0.00013 37.6 17.8 157 244-433 100-277 (299)
374 PF07082 DUF1350: Protein of u 93.9 0.75 1.6E-05 44.3 11.0 93 503-606 18-112 (250)
375 KOG0289|consensus 93.7 7.7 0.00017 40.1 18.1 116 246-393 347-463 (506)
376 PRK02888 nitrous-oxide reducta 93.7 1.1 2.4E-05 49.4 13.2 156 251-446 197-352 (635)
377 KOG1332|consensus 93.5 7.2 0.00016 37.2 18.5 76 299-393 210-289 (299)
378 KOG4378|consensus 93.4 8.4 0.00018 40.5 18.0 138 204-393 143-281 (673)
379 KOG0647|consensus 93.4 8.8 0.00019 37.8 21.8 84 9-101 29-112 (347)
380 COG4782 Uncharacterized protei 93.2 0.25 5.5E-06 49.9 7.0 116 499-624 114-238 (377)
381 KOG0277|consensus 93.2 3.3 7.1E-05 39.6 13.6 163 251-447 13-182 (311)
382 COG3319 Thioesterase domains o 93.1 0.29 6.3E-06 48.1 7.2 101 502-621 1-104 (257)
383 COG3490 Uncharacterized protei 93.1 9.5 0.00021 37.4 18.8 108 299-431 70-180 (366)
384 PF01764 Lipase_3: Lipase (cla 92.9 0.2 4.2E-06 44.7 5.5 53 564-619 47-105 (140)
385 KOG0316|consensus 92.9 4.9 0.00011 38.0 14.2 104 245-376 16-119 (307)
386 KOG0641|consensus 92.9 8.1 0.00018 36.0 24.2 73 248-341 233-305 (350)
387 COG1075 LipA Predicted acetylt 92.9 0.32 6.9E-06 50.6 7.6 99 503-619 61-163 (336)
388 KOG0268|consensus 92.8 1.6 3.4E-05 43.8 11.5 143 246-429 187-332 (433)
389 KOG1920|consensus 92.5 7.7 0.00017 45.7 18.0 63 244-316 66-129 (1265)
390 PF05057 DUF676: Putative seri 92.5 0.21 4.5E-06 48.4 5.3 20 584-603 78-97 (217)
391 TIGR03712 acc_sec_asp2 accesso 92.2 5.6 0.00012 42.3 15.2 106 498-623 286-393 (511)
392 KOG1539|consensus 92.1 2.2 4.8E-05 47.6 12.7 82 271-378 556-638 (910)
393 KOG2521|consensus 92.0 3.8 8.3E-05 42.1 13.7 64 725-788 225-290 (350)
394 cd00741 Lipase Lipase. Lipase 91.9 0.4 8.6E-06 43.5 6.2 25 583-607 27-51 (153)
395 KOG4328|consensus 91.9 8 0.00017 40.3 15.6 164 244-444 232-398 (498)
396 PF11288 DUF3089: Protein of u 91.8 0.21 4.6E-06 47.0 4.2 70 534-605 46-116 (207)
397 PRK13613 lipoprotein LpqB; Pro 91.6 28 0.0006 39.3 21.5 169 248-447 364-541 (599)
398 PRK13615 lipoprotein LpqB; Pro 91.6 8.1 0.00018 42.9 16.6 99 11-129 337-437 (557)
399 TIGR02604 Piru_Ver_Nterm putat 91.5 6.8 0.00015 41.6 15.8 113 250-377 75-202 (367)
400 KOG0288|consensus 91.4 1.9 4.1E-05 44.0 10.5 121 273-430 324-449 (459)
401 PF07995 GSDH: Glucose / Sorbo 91.4 17 0.00036 37.9 18.3 144 244-390 46-212 (331)
402 PF06850 PHB_depo_C: PHB de-po 91.3 0.29 6.4E-06 44.9 4.4 69 720-788 129-202 (202)
403 KOG1538|consensus 91.0 27 0.00058 38.4 18.8 59 363-435 228-286 (1081)
404 KOG1063|consensus 90.9 2.3 5E-05 46.4 11.1 118 249-390 528-648 (764)
405 KOG4547|consensus 90.8 13 0.00029 40.0 16.4 141 204-393 80-223 (541)
406 COG3946 VirJ Type IV secretory 90.8 5.7 0.00012 41.0 13.2 69 526-606 280-348 (456)
407 cd00519 Lipase_3 Lipase (class 90.5 0.5 1.1E-05 46.4 5.8 52 565-619 112-167 (229)
408 KOG2111|consensus 90.5 20 0.00043 35.8 15.9 103 260-391 150-257 (346)
409 KOG0302|consensus 90.4 5.5 0.00012 40.3 12.5 156 250-445 215-378 (440)
410 KOG0268|consensus 90.3 1.5 3.3E-05 43.9 8.5 140 115-316 194-334 (433)
411 PF06977 SdiA-regulated: SdiA- 90.3 20 0.00043 35.4 21.3 205 246-480 21-233 (248)
412 PRK13614 lipoprotein LpqB; Pro 90.2 8.8 0.00019 42.8 15.4 107 10-129 345-454 (573)
413 KOG0303|consensus 90.0 25 0.00054 36.1 22.3 131 204-378 154-284 (472)
414 KOG0290|consensus 90.0 21 0.00045 35.1 19.8 159 244-431 194-355 (364)
415 TIGR02604 Piru_Ver_Nterm putat 89.9 10 0.00022 40.2 15.5 56 362-427 128-198 (367)
416 COG3204 Uncharacterized protei 89.9 5.4 0.00012 39.3 11.7 122 245-391 84-211 (316)
417 COG2939 Carboxypeptidase C (ca 89.8 0.81 1.8E-05 48.6 6.7 104 497-603 97-217 (498)
418 KOG1408|consensus 89.8 25 0.00054 39.0 17.5 115 249-391 599-714 (1080)
419 PRK10252 entF enterobactin syn 89.6 0.9 2E-05 57.6 8.5 98 502-618 1069-1169(1296)
420 KOG1523|consensus 89.5 24 0.00052 35.2 19.6 26 363-393 212-237 (361)
421 PRK13615 lipoprotein LpqB; Pro 89.5 27 0.00058 38.9 18.2 165 249-447 336-504 (557)
422 PF07995 GSDH: Glucose / Sorbo 89.4 30 0.00064 36.1 18.6 173 250-442 5-211 (331)
423 KOG4283|consensus 89.3 12 0.00027 36.6 13.4 154 246-429 101-263 (397)
424 PF06977 SdiA-regulated: SdiA- 89.2 24 0.00052 34.8 20.0 198 175-430 27-239 (248)
425 KOG1523|consensus 89.2 26 0.00056 35.0 17.4 175 244-447 53-238 (361)
426 KOG3724|consensus 89.0 0.64 1.4E-05 51.6 5.4 40 564-603 156-201 (973)
427 KOG0307|consensus 89.0 6.1 0.00013 46.0 13.2 116 247-390 207-327 (1049)
428 KOG1034|consensus 89.0 27 0.00058 35.0 18.6 84 202-312 113-197 (385)
429 PF02450 LCAT: Lecithin:choles 88.4 0.58 1.3E-05 49.9 4.7 51 565-619 104-159 (389)
430 PF03088 Str_synth: Strictosid 88.4 4.7 0.0001 32.3 8.6 63 363-434 3-78 (89)
431 KOG1963|consensus 88.4 35 0.00076 38.8 18.1 100 249-378 208-313 (792)
432 PRK13613 lipoprotein LpqB; Pro 88.3 19 0.00041 40.6 16.5 108 9-129 364-475 (599)
433 KOG1009|consensus 88.3 12 0.00026 38.4 13.2 57 363-432 129-185 (434)
434 KOG1408|consensus 88.3 3.6 7.9E-05 45.1 10.2 102 299-431 81-184 (1080)
435 KOG0294|consensus 87.7 32 0.00069 34.3 17.8 63 245-316 126-188 (362)
436 KOG0277|consensus 87.6 28 0.00061 33.6 14.5 159 246-445 60-221 (311)
437 PF04083 Abhydro_lipase: Parti 87.4 2.7 5.8E-05 31.1 6.2 45 469-513 11-55 (63)
438 PF11768 DUF3312: Protein of u 87.4 49 0.0011 36.1 19.4 193 202-446 130-330 (545)
439 KOG0308|consensus 87.2 17 0.00036 39.9 14.1 165 244-446 115-286 (735)
440 KOG0307|consensus 87.0 9.7 0.00021 44.4 13.1 101 299-425 209-309 (1049)
441 PF02333 Phytase: Phytase; In 86.4 46 0.001 34.9 16.7 168 257-446 110-291 (381)
442 TIGR03606 non_repeat_PQQ dehyd 86.4 51 0.0011 35.7 17.7 117 250-378 33-165 (454)
443 PF00326 Peptidase_S9: Prolyl 86.0 0.87 1.9E-05 44.0 4.1 58 642-700 125-184 (213)
444 PLN02454 triacylglycerol lipas 85.6 1.3 2.9E-05 46.4 5.3 39 564-603 209-247 (414)
445 KOG1538|consensus 85.4 10 0.00022 41.4 11.5 57 299-375 15-71 (1081)
446 PLN00413 triacylglycerol lipas 85.3 1.4 3E-05 46.9 5.2 37 564-603 267-303 (479)
447 PRK13614 lipoprotein LpqB; Pro 85.0 72 0.0016 35.8 20.1 172 248-446 344-519 (573)
448 KOG4283|consensus 84.8 43 0.00093 33.1 20.8 112 246-378 143-267 (397)
449 PF04301 DUF452: Protein of un 84.7 3.4 7.3E-05 39.3 7.1 37 729-772 169-205 (213)
450 KOG1520|consensus 84.0 17 0.00036 37.6 12.0 136 273-435 138-287 (376)
451 PLN02408 phospholipase A1 83.9 1.7 3.6E-05 45.0 5.1 37 566-603 183-219 (365)
452 KOG0647|consensus 83.3 6.8 0.00015 38.5 8.4 97 245-369 26-125 (347)
453 PLN02571 triacylglycerol lipas 83.1 1.9 4E-05 45.4 5.1 38 565-603 208-245 (413)
454 PF03088 Str_synth: Strictosid 83.0 7 0.00015 31.3 7.1 73 302-393 3-88 (89)
455 PF05787 DUF839: Bacterial pro 82.8 22 0.00048 39.5 13.5 40 273-316 482-521 (524)
456 PLN02934 triacylglycerol lipas 82.8 1.8 4E-05 46.3 5.0 37 564-603 304-340 (515)
457 KOG2321|consensus 82.8 78 0.0017 34.5 17.4 113 299-444 231-345 (703)
458 KOG0650|consensus 82.7 80 0.0017 34.6 19.1 102 299-430 524-625 (733)
459 PF02089 Palm_thioest: Palmito 82.6 8.2 0.00018 38.4 9.0 111 498-619 3-115 (279)
460 PF06259 Abhydrolase_8: Alpha/ 82.5 4 8.7E-05 37.7 6.5 53 564-618 91-143 (177)
461 PLN02310 triacylglycerol lipas 82.3 3.6 7.8E-05 43.2 6.8 39 565-603 189-228 (405)
462 PLN02162 triacylglycerol lipas 82.2 2.1 4.7E-05 45.4 5.1 37 564-603 261-297 (475)
463 KOG1063|consensus 81.9 92 0.002 34.8 20.6 123 244-388 265-389 (764)
464 KOG0269|consensus 81.1 24 0.00053 39.5 12.5 164 245-445 132-296 (839)
465 PLN02324 triacylglycerol lipas 81.1 2.4 5.3E-05 44.5 5.0 38 565-603 197-234 (415)
466 PF11768 DUF3312: Protein of u 80.5 95 0.0021 34.0 21.6 70 299-392 262-331 (545)
467 KOG0299|consensus 80.2 84 0.0018 33.2 19.9 60 363-432 386-445 (479)
468 COG1073 Hydrolases of the alph 80.1 0.35 7.5E-06 49.5 -1.5 44 646-689 218-261 (299)
469 KOG0292|consensus 80.0 1.2E+02 0.0027 35.0 19.8 246 81-422 338-595 (1202)
470 KOG2541|consensus 79.7 18 0.00039 35.3 9.8 102 501-618 24-126 (296)
471 PLN02633 palmitoyl protein thi 79.6 16 0.00034 36.9 9.8 36 584-619 94-130 (314)
472 KOG2041|consensus 79.6 1E+02 0.0023 34.5 16.4 258 2-448 106-372 (1189)
473 TIGR03606 non_repeat_PQQ dehyd 79.5 99 0.0021 33.6 17.8 70 245-316 77-164 (454)
474 KOG0283|consensus 79.5 1.2E+02 0.0026 34.5 18.4 104 246-379 369-473 (712)
475 PLN02802 triacylglycerol lipas 79.3 2.9 6.3E-05 44.9 5.0 38 565-603 312-349 (509)
476 KOG0270|consensus 79.3 68 0.0015 33.6 14.2 141 251-430 248-391 (463)
477 KOG0303|consensus 78.8 71 0.0015 33.0 14.0 71 299-393 134-204 (472)
478 KOG1283|consensus 78.7 12 0.00027 37.3 8.5 136 477-623 10-169 (414)
479 KOG2111|consensus 78.3 40 0.00086 33.7 11.8 97 332-445 160-256 (346)
480 KOG4328|consensus 78.0 65 0.0014 34.0 13.7 160 246-445 186-353 (498)
481 KOG2321|consensus 77.9 1.1E+02 0.0024 33.4 18.6 113 247-391 229-344 (703)
482 PLN02606 palmitoyl-protein thi 77.6 17 0.00036 36.6 9.4 36 584-619 95-131 (306)
483 KOG1520|consensus 77.5 42 0.00091 34.8 12.3 105 301-434 119-240 (376)
484 PLN02719 triacylglycerol lipas 77.3 3.7 8E-05 44.2 5.1 39 565-603 277-317 (518)
485 KOG1963|consensus 76.9 73 0.0016 36.4 14.8 101 301-432 210-312 (792)
486 PLN02761 lipase class 3 family 76.8 3.8 8.2E-05 44.2 5.0 39 565-603 272-313 (527)
487 KOG1034|consensus 76.7 89 0.0019 31.6 14.2 146 268-445 63-211 (385)
488 PF12566 DUF3748: Protein of u 76.6 1.7 3.7E-05 35.6 1.8 16 12-27 72-87 (122)
489 PLN02753 triacylglycerol lipas 76.2 4.2 9.1E-05 43.9 5.1 40 564-603 290-331 (531)
490 PLN03037 lipase class 3 family 75.9 4.1 8.9E-05 43.9 5.0 38 566-603 299-337 (525)
491 PF04053 Coatomer_WDAD: Coatom 75.3 1.3E+02 0.0028 32.7 18.4 29 249-281 147-175 (443)
492 COG3204 Uncharacterized protei 75.1 53 0.0011 32.8 11.7 120 299-443 88-210 (316)
493 KOG0302|consensus 74.2 75 0.0016 32.6 12.7 125 244-393 255-381 (440)
494 PF04053 Coatomer_WDAD: Coatom 73.7 1.2E+02 0.0025 33.1 15.3 130 246-431 32-163 (443)
495 KOG1230|consensus 73.4 34 0.00074 35.5 10.3 141 142-313 153-313 (521)
496 KOG0641|consensus 73.3 83 0.0018 29.7 22.3 70 300-393 235-304 (350)
497 KOG0313|consensus 73.2 81 0.0017 32.5 12.7 146 243-427 257-404 (423)
498 PF13449 Phytase-like: Esteras 73.0 1.2E+02 0.0026 31.4 18.8 190 246-446 19-252 (326)
499 PF15492 Nbas_N: Neuroblastoma 72.6 1E+02 0.0023 30.5 18.0 68 252-342 3-76 (282)
500 TIGR03300 assembly_YfgL outer 71.9 1.4E+02 0.003 31.7 21.2 20 369-393 241-260 (377)
No 1
>KOG2100|consensus
Probab=100.00 E-value=2.1e-49 Score=443.36 Aligned_cols=456 Identities=43% Similarity=0.820 Sum_probs=391.2
Q ss_pred CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCC-ceeEccCCCEEEEEEcccccc
Q psy463 244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFD-HLRFSSDGKKMLLILSHNQES 321 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~-~~~~spDg~~i~~~~~~~~~~ 321 (790)
....++..+.|.-+.+ .+.+++|.++...+.+|+.. +.|..........+|.+... .+.++.|+....++.+ ..
T Consensus 286 ~~~~~~~~~~W~~~~~~~~~~~~r~~~~~~~~~cd~~-~~~~~~~~~~~~~~W~~~~~~~~~~~~d~~~~~~~~~---~~ 361 (755)
T KOG2100|consen 286 SGEYYVTNVKWDTTEKVLVVWTNREQNISVETLCDTP-GICRVVYEESSDGGWVEHQNVEPVFSSDGSSYLKVDS---VS 361 (755)
T ss_pred cCceEEEEEEEecCccEEEEEEccCCCeeeeEEecCc-ccceeeEeccccccccccccccceEeecCCceeEEEe---ec
Confidence 4466778899999988 88999999999889999988 77776666544335886553 5889999977665665 33
Q ss_pred CCCCCcCcccEEEEEEcCCC-CcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcce
Q psy463 322 DGSTPVDSWDHLTFIDLDDQ-AGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPEC 400 (790)
Q Consensus 322 ~g~~~~~~~~~l~~~d~~~~-~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 400 (790)
++. +.|+..+....+ . ++.||.+.|.+..++.|+.+++.++|.+....+..++||.+++.+ .....
T Consensus 362 ~~~-----~~hi~~~~~~~~~~------~~~lt~g~w~v~~i~~~~~~~~~i~f~~~~~~~~~~~ly~i~~~~--~~~~~ 428 (755)
T KOG2100|consen 362 DGG-----YNHIAYLKLSNGSE------PRMLTSGNWEVTSILGYDKDSNRIYFDAYEEDPSERHLYSISLGS--GTVES 428 (755)
T ss_pred cCC-----EEEEEEEEcCCCCc------cccccccceEEEEeccccCCCceEEEEecCCCCCceEEEEEEccc--ccccc
Confidence 441 778888887766 4 788999999998889999999999999988777889999999987 56666
Q ss_pred eeecccccCCCcccEEEEEEecCCcEEEEEeecCCCC--eEEEEecCC-CeEEEeccchhHHHhhccCCCCceEEEEEEc
Q psy463 401 ITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIP--EIMLFDKTG-QRLLYWDTNEDLRTALTNITLPSVEYMSVPI 477 (790)
Q Consensus 401 lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~--~i~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (790)
+||...+ +.|.+.++++++..++++..+.++.+| .+-+..... .....|..|+.++..+....++..+..++..
T Consensus 429 lt~~~~~---~~~~~~~~~~~~~~~~~v~~~~gP~~p~~~~~~~~~~~~~~~~~Le~n~~~~~~~~~~~~p~~~~~~i~~ 505 (755)
T KOG2100|consen 429 LTCSLIT---GPCTYLSVSFSKSAKYYVLSCSGPKVPDGQLTRHSSKNSKTIVVLETNEELKKTIENVALPIVEFGKIEI 505 (755)
T ss_pred ccccCCC---CcceEEEEecCCcccEEEEEccCCCCCcceeeccccccceEEEEeccChhhHHHhhcccCCcceeEEEEe
Confidence 8886443 678888999999999999999999977 454444444 3477889999999888888888888888888
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc
Q psy463 478 QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR 557 (790)
Q Consensus 478 ~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 557 (790)
+|....+.+++|+++. +.+++|+||.+||||+++.+...+...|..+++...|++|+.+|+||++++|..++.+..+
T Consensus 506 -~~~~~~~~~~lP~~~~--~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~ 582 (755)
T KOG2100|consen 506 -DGITANAILILPPNFD--PSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPR 582 (755)
T ss_pred -ccEEEEEEEecCCCCC--CCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhh
Confidence 9999999999999998 8889999999999999988899999999999999999999999999999999999999999
Q ss_pred cCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCC
Q psy463 558 RLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLP 637 (790)
Q Consensus 558 ~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~ 637 (790)
++|..++.|+..+++++.+ .+.+|.+||+|+|+|+||++++.++..++...|+|+++++||++|..|+..+.+++||.|
T Consensus 583 ~lG~~ev~D~~~~~~~~~~-~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~terymg~p 661 (755)
T KOG2100|consen 583 NLGDVEVKDQIEAVKKVLK-LPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERYMGLP 661 (755)
T ss_pred hcCCcchHHHHHHHHHHHh-cccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccHhhcCCC
Confidence 9999999999999999998 679999999999999999999999999887899999999999999999999999999988
Q ss_pred CccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhh
Q psy463 638 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALN 717 (790)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (790)
.++...|.+.++.
T Consensus 662 --~~~~~~y~e~~~~----------------------------------------------------------------- 674 (755)
T KOG2100|consen 662 --SENDKGYEESSVS----------------------------------------------------------------- 674 (755)
T ss_pred --ccccchhhhcccc-----------------------------------------------------------------
Confidence 4444445544332
Q ss_pred hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhhC
Q psy463 718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790 (790)
Q Consensus 718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l~ 790 (790)
..+.+++++-+|++||+.|.+|+++++.+++++|+.+|+++++++||+++|++.. ...+++..+..||..|+.
T Consensus 675 ~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 675 SPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFG 749 (755)
T ss_pred chhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcC
Confidence 4455562333699999999999999999999999999999999999999999998 458999999999998863
No 2
>KOG2281|consensus
Probab=100.00 E-value=2.2e-45 Score=371.96 Aligned_cols=454 Identities=27% Similarity=0.447 Sum_probs=355.8
Q ss_pred CEEEEEEEccCCc--EEEEEeccCcceEEEEEECCCCce---------------------eEEEEEeCCCcccccCC--c
Q psy463 247 PVLSRVNWANESV--VAAWVNRVQNRARITRCSINEGTC---------------------DVVFSRDLDRGWFEPFD--H 301 (790)
Q Consensus 247 ~~~~~~~wspDg~--~~~~~~r~~~~~~i~~~~~~~g~~---------------------~~l~~~~~~~~~~~~~~--~ 301 (790)
.|+.++.|.|||+ ++...+|.+.+.+|.+++.+.... ..+.++ ....|+.+.. .
T Consensus 358 EYI~Ragwtpdgkyvwvq~LdR~Q~~l~iilip~~~f~~~~dn~~~~~~~~~~v~~~~~~~viyee-~sd~winiHd~f~ 436 (867)
T KOG2281|consen 358 EYIARAGWTPDGKYVWVQVLDRSQQRLQIILIPPTLFIPKEDNLQLRTDLNMGVPDDVSPEVIYEE-PSDGWINIHDIFH 436 (867)
T ss_pred eeeeeccccCCCcEEEEEEecCCcceeEEEEECHHHcCCccccHhhhhhhhhcCCcCCCcceEEec-CCCceEEhhhccc
Confidence 6899999999999 788889999999999998876543 333443 4467875421 2
Q ss_pred ee-Ecc-CCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCC----c------------ccCCCcccccCCCeEEeEE-
Q psy463 302 LR-FSS-DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQA----G------------IKDKVPVPLTRGRFTVTEI- 362 (790)
Q Consensus 302 ~~-~sp-Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~----~------------~~~~~~~~lt~~~~~~~~~- 362 (790)
+- -++ .+..=+.+++ +..| +.|||++....+. . +.....+.||.++|++...
T Consensus 437 ~~~~~~~e~~~~fi~as---E~~~------Frhly~its~lk~ng~~~s~~~~p~~~d~~c~i~ee~altSgeweVl~r~ 507 (867)
T KOG2281|consen 437 PLPQSTHEASYPFIWAS---EETG------FRHLYLITSLLKPNGYCLSLGSAPLDQDFKCRIKEEIALTSGEWEVLARH 507 (867)
T ss_pred ccccCCccceeeEEEec---cccc------ceEEEEEEeecccCCCcccccCCcccccccCcchhheeecccceeehhhc
Confidence 22 244 3333333566 6778 8999998653210 0 1112245688999988532
Q ss_pred -EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC-CCeEE
Q psy463 363 -LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG-IPEIM 440 (790)
Q Consensus 363 -~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~-~~~i~ 440 (790)
+..+.-.+.+||.++..+|.+.+||+++.... |+..+||.. +.-....++-+-+.++.-++..+ ||.+.
T Consensus 508 Gi~VdE~~~LVYf~gt~d~PlE~hLyvvsye~~-g~~~rlt~~--------g~sh~~~l~~~~d~fv~~~~sv~sP~cv~ 578 (867)
T KOG2281|consen 508 GIWVDEVRKLVYFVGTKDTPLEHHLYVVSYENP-GEIARLTEP--------GYSHSCELDQQCDHFVSYYSSVGSPPCVS 578 (867)
T ss_pred CeeecccceEEEEEccCCCCceeeEEEEEEecC-CceeeccCC--------CcccchhhhhhhhhHhhhhhcCCCCceEE
Confidence 34566678899999999999999999999742 777777752 22233346666666655566666 88998
Q ss_pred EEecCCCeEEEeccchhHHHhhccCCC-----CceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccc
Q psy463 441 LFDKTGQRLLYWDTNEDLRTALTNITL-----PSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQ 515 (790)
Q Consensus 441 ~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~ 515 (790)
++.+.+..--.+.....+...+.+... -.++.+.|.++.|..++|++|+|.+++ ++++||+|++++|||+.|.
T Consensus 579 ~y~ls~~~~~~l~~q~~~~~~l~~~~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~~--pgkkYptvl~VYGGP~VQl 656 (867)
T KOG2281|consen 579 LYSLSWPENDPLPKQVSFWAILVSGAPPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNFQ--PGKKYPTVLNVYGGPGVQL 656 (867)
T ss_pred EEeccCCccCcccchhhHHHHHHhcCCCCCccCChhheeeecCCCcEEEEEEEccccCC--CCCCCceEEEEcCCCceEE
Confidence 888876433333333333333322222 234668889988999999999999998 8999999999999999999
Q ss_pred cccccccc--hHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEech
Q psy463 516 VTERFSVD--WNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSY 593 (790)
Q Consensus 516 ~~~~~~~~--~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~ 593 (790)
+.+.|... +....++++||+|+.+|.||+...|..|........|..+++|....+++|+++.+.+|.+||+|.||||
T Consensus 657 Vnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSY 736 (867)
T KOG2281|consen 657 VNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSY 736 (867)
T ss_pred eeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEecccc
Confidence 99988743 3445567799999999999999999999999999999999999999999999988899999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCc
Q psy463 594 GGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN 673 (790)
Q Consensus 594 GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~ 673 (790)
|||+++.++.++|. .|+++|+++|+++|..|++.|+|+|||.| ..+...|...++..++.++..
T Consensus 737 GGYLSlm~L~~~P~-IfrvAIAGapVT~W~~YDTgYTERYMg~P--~~nE~gY~agSV~~~Veklpd------------- 800 (867)
T KOG2281|consen 737 GGYLSLMGLAQYPN-IFRVAIAGAPVTDWRLYDTGYTERYMGYP--DNNEHGYGAGSVAGHVEKLPD------------- 800 (867)
T ss_pred ccHHHHHHhhcCcc-eeeEEeccCcceeeeeecccchhhhcCCC--ccchhcccchhHHHHHhhCCC-------------
Confidence 99999999999986 99999999999999999999999999999 777888887776666655531
Q ss_pred cChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHh
Q psy463 674 VHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQH 753 (790)
Q Consensus 674 v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~ 753 (790)
- ...+|++||.-|++|++.+.-.|..+|.+
T Consensus 801 -------------------------------------------------e-pnRLlLvHGliDENVHF~Hts~Lvs~lvk 830 (867)
T KOG2281|consen 801 -------------------------------------------------E-PNRLLLVHGLIDENVHFAHTSRLVSALVK 830 (867)
T ss_pred -------------------------------------------------C-CceEEEEecccccchhhhhHHHHHHHHHh
Confidence 0 34589999999999999999999999999
Q ss_pred cCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHH
Q psy463 754 ADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDS 787 (790)
Q Consensus 754 ~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~ 787 (790)
+|++.++++||++.|++.. ....+-..++.|+++
T Consensus 831 agKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 831 AGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred CCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 9999999999999999997 666777889999875
No 3
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=5.5e-43 Score=390.95 Aligned_cols=442 Identities=24% Similarity=0.325 Sum_probs=316.1
Q ss_pred CCEEEEEEEccCCcEEEEEeccCc---c-eEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463 246 EPVLSRVNWANESVVAAWVNRVQN---R-ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES 321 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~~r~~~---~-~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~ 321 (790)
........|.+|++.++......+ . ...+.....++....++.... + ...+.|.+||+.+++... +.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~gk~~~~~~~---~~ 237 (620)
T COG1506 167 NLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNGELESLTPGEG---S---ISKLAFDADGKSIALLGT---ES 237 (620)
T ss_pred CCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCCceEEEcCCCc---e---eeeeeeCCCCCeeEEecc---CC
Confidence 344555666666775554433222 1 223333334555555554322 1 457899999998886554 22
Q ss_pred C-CCCCcCcccEEEEEEcCCCCcccCCCccc-ccCCCe-EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc
Q psy463 322 D-GSTPVDSWDHLTFIDLDDQAGIKDKVPVP-LTRGRF-TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP 398 (790)
Q Consensus 322 ~-g~~~~~~~~~l~~~d~~~~~~~~~~~~~~-lt~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 398 (790)
. +. .....+++++.+.++ ... +...+. .......+.-++..++|.+.... +...++.+.... ...
T Consensus 238 ~~~~---~~~~~~~~~~~~~~~------~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~l~~~~~~~--~~~ 305 (620)
T COG1506 238 DRGL---AEGDFILLLDGELGE------VDGDLSSGDDTRGAWAVEGGLDGDGLLFIATDGG-GSSPLFRVDDLG--GGV 305 (620)
T ss_pred ccCc---cccceEEEEeccccc------cceeeccCCcccCcHHhccccCCCcEEEEEecCC-CceEEEEEeccC--Cce
Confidence 2 21 123456666633333 222 111110 00011122245667888777622 225666665443 222
Q ss_pred ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC-CCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEEEc
Q psy463 399 ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG-IPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPI 477 (790)
Q Consensus 399 ~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (790)
..+.. ..+.+. .|+.+++.+++..+++. ||++++++. +.+.+....+. ..+....+.+++.+++++
T Consensus 306 ~~~~~-------~~~~v~--~f~~~~~~~~~~~s~~~~p~~i~~~~~-~~~~~~~~~~~---~~~~~~~~~~~e~~~~~~ 372 (620)
T COG1506 306 EGLSG-------DDGGVP--GFDVDGRKLALAYSSPTEPPEIYLYDR-GEEAKLTSSNN---SGLKKVKLAEPEPVTYKS 372 (620)
T ss_pred eeecC-------CCceEE--EEeeCCCEEEEEecCCCCccceEEEcC-CCceEEeeccc---ccccccccCCceEEEEEc
Confidence 21211 223443 44459999999999999 999999987 43333333322 235677889999999999
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc
Q psy463 478 QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR 557 (790)
Q Consensus 478 ~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 557 (790)
.||.++++++++|.+++ +.+++|+||++||||..+. .+...+..+.++.+||+|+.+|+||++++|++|.....+
T Consensus 373 ~dG~~i~~~l~~P~~~~--~~k~yP~i~~~hGGP~~~~---~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~ 447 (620)
T COG1506 373 NDGETIHGWLYKPPGFD--PRKKYPLIVYIHGGPSAQV---GYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRG 447 (620)
T ss_pred CCCCEEEEEEecCCCCC--CCCCCCEEEEeCCCCcccc---ccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhh
Confidence 99999999999999988 7778999999999997743 356667777888899999999999999999999999999
Q ss_pred cCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCC
Q psy463 558 RLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLP 637 (790)
Q Consensus 558 ~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~ 637 (790)
.+|..+++|+.++++++.+ .+.+|++|++|+|+|+||+++++++.+.+ .|+++++..+.++|..+...+.+.+++.+
T Consensus 448 ~~g~~~~~D~~~~~~~l~~-~~~~d~~ri~i~G~SyGGymtl~~~~~~~--~f~a~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (620)
T COG1506 448 DWGGVDLEDLIAAVDALVK-LPLVDPERIGITGGSYGGYMTLLAATKTP--RFKAAVAVAGGVDWLLYFGESTEGLRFDP 524 (620)
T ss_pred ccCCccHHHHHHHHHHHHh-CCCcChHHeEEeccChHHHHHHHHHhcCc--hhheEEeccCcchhhhhccccchhhcCCH
Confidence 9999999999999998877 99999999999999999999999999765 89999999998888765544444443222
Q ss_pred CccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhh
Q psy463 638 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALN 717 (790)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (790)
... ...+.. ....|...+|+
T Consensus 525 --~~~--------------------------------------------------------~~~~~~--~~~~~~~~sp~ 544 (620)
T COG1506 525 --EEN--------------------------------------------------------GGGPPE--DREKYEDRSPI 544 (620)
T ss_pred --HHh--------------------------------------------------------CCCccc--ChHHHHhcChh
Confidence 000 000000 34556777788
Q ss_pred hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhhC
Q psy463 718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790 (790)
Q Consensus 718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l~ 790 (790)
.+++++ ++|+|||||++|.+||++++.+|+++|+.+|+++++++||+++|++.. +....++.+++||++||+
T Consensus 545 ~~~~~i-~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 545 FYADNI-KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred hhhccc-CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 999999 999999999999999999999999999999999999999999999997 788899999999999985
No 4
>PRK10115 protease 2; Provisional
Probab=100.00 E-value=7.7e-35 Score=326.60 Aligned_cols=530 Identities=14% Similarity=0.079 Sum_probs=338.8
Q ss_pred ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463 113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ 192 (790)
Q Consensus 113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (790)
...|||||+.|+|..+..+.. +.+|+++++.++. .+...++... ....|.++++. ++|.+...
T Consensus 131 ~~~~Spdg~~la~~~d~~G~E--------~~~l~v~d~~tg~----~l~~~i~~~~----~~~~w~~D~~~-~~y~~~~~ 193 (686)
T PRK10115 131 GMAITPDNTIMALAEDFLSRR--------QYGIRFRNLETGN----WYPELLDNVE----PSFVWANDSWT-FYYVRKHP 193 (686)
T ss_pred EEEECCCCCEEEEEecCCCcE--------EEEEEEEECCCCC----CCCccccCcc----eEEEEeeCCCE-EEEEEecC
Confidence 347899999999987644432 4489999998774 1233333322 23577666553 66665521
Q ss_pred CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463 193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR 272 (790)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~ 272 (790)
.. .+..+||+.++.++... .+.+. .+ ..........-+.|++++...........
T Consensus 194 --~~----~~~~~v~~h~lgt~~~~----d~lv~------------~e---~~~~~~~~~~~s~d~~~l~i~~~~~~~~~ 248 (686)
T PRK10115 194 --VT----LLPYQVWRHTIGTPASQ----DELVY------------EE---KDDTFYVSLHKTTSKHYVVIHLASATTSE 248 (686)
T ss_pred --CC----CCCCEEEEEECCCChhH----CeEEE------------ee---CCCCEEEEEEEcCCCCEEEEEEECCcccc
Confidence 10 12378999999987321 11222 10 11112222333448984444333333344
Q ss_pred EEEEE--CCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCC-CCcccCCCc
Q psy463 273 ITRCS--INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD-QAGIKDKVP 349 (790)
Q Consensus 273 i~~~~--~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~-~~~~~~~~~ 349 (790)
+++++ ..+++.+.+....... .......+..+++... .++. ...|..+++.+ ++ .
T Consensus 249 ~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ly~~tn----~~~~-----~~~l~~~~~~~~~~------~ 306 (686)
T PRK10115 249 VLLLDAELADAEPFVFLPRRKDH-------EYSLDHYQHRFYLRSN----RHGK-----NFGLYRTRVRDEQQ------W 306 (686)
T ss_pred EEEEECcCCCCCceEEEECCCCC-------EEEEEeCCCEEEEEEc----CCCC-----CceEEEecCCCccc------C
Confidence 66666 4445544444432211 1222233456664443 3221 45788888763 33 3
Q ss_pred ccccCC--CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEe--cCCc
Q psy463 350 VPLTRG--RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFS--TNVS 425 (790)
Q Consensus 350 ~~lt~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s--~dg~ 425 (790)
+.|... ...+.. +.++ ++.|++....+. ...|+.++..+ ++...|+.. .........++ +++.
T Consensus 307 ~~l~~~~~~~~i~~-~~~~--~~~l~~~~~~~g--~~~l~~~~~~~--~~~~~l~~~------~~~~~~~~~~~~~~~~~ 373 (686)
T PRK10115 307 EELIPPRENIMLEG-FTLF--TDWLVVEERQRG--LTSLRQINRKT--REVIGIAFD------DPAYVTWIAYNPEPETS 373 (686)
T ss_pred eEEECCCCCCEEEE-EEEE--CCEEEEEEEeCC--EEEEEEEcCCC--CceEEecCC------CCceEeeecccCCCCCc
Confidence 444433 234443 5565 557888777632 37899998765 445554411 11122333444 6677
Q ss_pred EEEEEeecCC-CCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEE
Q psy463 426 YYVLSCIGPG-IPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLL 504 (790)
Q Consensus 426 ~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~v 504 (790)
.+++.+++.. |+.+|.+|..+++.+.++.... ..+..... .++.+++++.||.+|+++++.++... ..++.|+|
T Consensus 374 ~~~~~~ss~~~P~~~y~~d~~~~~~~~l~~~~~--~~~~~~~~-~~e~v~~~s~DG~~Ip~~l~~~~~~~--~~~~~P~l 448 (686)
T PRK10115 374 RLRYGYSSMTTPDTLFELDMDTGERRVLKQTEV--PGFDAANY-RSEHLWITARDGVEVPVSLVYHRKHF--RKGHNPLL 448 (686)
T ss_pred eEEEEEecCCCCCEEEEEECCCCcEEEEEecCC--CCcCcccc-EEEEEEEECCCCCEEEEEEEEECCCC--CCCCCCEE
Confidence 7888888888 9999999998876666653320 01222223 78899999999999999665544322 24567999
Q ss_pred EEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCC
Q psy463 505 IHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKT 584 (790)
Q Consensus 505 v~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ 584 (790)
|++||+++... ...|+..+ +.+.++||+|+.+|+||++++|..|..+....++...++|+++++++|++ .+++|++
T Consensus 449 l~~hGg~~~~~-~p~f~~~~--~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~-~g~~d~~ 524 (686)
T PRK10115 449 VYGYGSYGASI-DADFSFSR--LSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLK-LGYGSPS 524 (686)
T ss_pred EEEECCCCCCC-CCCccHHH--HHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHH-cCCCChH
Confidence 99999998754 44555433 34555999999999999999999999988888888999999999999998 7999999
Q ss_pred ceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEE
Q psy463 585 RTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYL 664 (790)
Q Consensus 585 ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l 664 (790)
|++|+|.|+||+++.+++.++|+ +|+|+|+..|+.|+..+- ..+........+..
T Consensus 525 rl~i~G~S~GG~l~~~~~~~~Pd-lf~A~v~~vp~~D~~~~~--------~~~~~p~~~~~~~e---------------- 579 (686)
T PRK10115 525 LCYGMGGSAGGMLMGVAINQRPE-LFHGVIAQVPFVDVVTTM--------LDESIPLTTGEFEE---------------- 579 (686)
T ss_pred HeEEEEECHHHHHHHHHHhcChh-heeEEEecCCchhHhhhc--------ccCCCCCChhHHHH----------------
Confidence 99999999999999999998885 999999999999976320 00000000000000
Q ss_pred EEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCcc-EEEEecCCCcccchhh
Q psy463 665 LVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQ-YLLVHGTMDDNVHFQQ 743 (790)
Q Consensus 665 ~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P-~Lii~G~~D~~v~~~~ 743 (790)
.+.|.-+.........||+.+++++ +.| +|++||.+|.+||+.+
T Consensus 580 ----------------------------------~G~p~~~~~~~~l~~~SP~~~v~~~-~~P~lLi~~g~~D~RV~~~~ 624 (686)
T PRK10115 580 ----------------------------------WGNPQDPQYYEYMKSYSPYDNVTAQ-AYPHLLVTTGLHDSQVQYWE 624 (686)
T ss_pred ----------------------------------hCCCCCHHHHHHHHHcCchhccCcc-CCCceeEEecCCCCCcCchH
Confidence 0111111112233445666889999 888 6777999999999999
Q ss_pred hHHHHHHHHhcCCceEEEEc---CCCCCcCCCcchHHHH---HHHHHHHHh
Q psy463 744 SMMLAKSLQHADIMFQSQTY---PDEEHGLIGVRPHFYH---TLERFLDSC 788 (790)
Q Consensus 744 ~~~l~~~l~~~g~~~~~~~~---p~~~H~~~~~~~~~~~---~i~~fl~~~ 788 (790)
+.+++.+|++.+++++++++ +++||+...++...++ ....||-+.
T Consensus 625 ~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~ 675 (686)
T PRK10115 625 PAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIAL 675 (686)
T ss_pred HHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888 9999995543333333 335555543
No 5
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.95 E-value=1.7e-27 Score=232.54 Aligned_cols=202 Identities=30% Similarity=0.433 Sum_probs=163.6
Q ss_pred ccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHH
Q psy463 521 SVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGL 600 (790)
Q Consensus 521 ~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~ 600 (790)
++.+..++++++||+|+.+|+||++++|..|.....+.++...++|+.++++++++ .+.+|++||+|+|+|+||++++.
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~-~~~iD~~ri~i~G~S~GG~~a~~ 80 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIK-QYYIDPDRIGIMGHSYGGYLALL 80 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHH-TTSEEEEEEEEEEETHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhc-cccccceeEEEEcccccccccch
Confidence 44577888888999999999999999999999999999999999999999999998 66899999999999999999999
Q ss_pred HHhcCCCCceEEEEEeCCCCCccccccc---chh-hhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccCh
Q psy463 601 ALALDPSNVFKCGISVAPVTDWIYYDTI---YSE-RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHF 676 (790)
Q Consensus 601 ~a~~~p~~~~~~~v~~~~~~~~~~~~~~---~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~ 676 (790)
++.++|+ .|+++++.+|+.++..+... +.. .+.+.
T Consensus 81 ~~~~~~~-~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~---------------------------------------- 119 (213)
T PF00326_consen 81 AATQHPD-RFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEY---------------------------------------- 119 (213)
T ss_dssp HHHHTCC-GSSEEEEESE-SSTTCSBHHTCCHHHGHHHHH----------------------------------------
T ss_pred hhcccce-eeeeeeccceecchhccccccccccccccccc----------------------------------------
Confidence 9998875 99999999999887643211 111 01000
Q ss_pred hhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhc--cCCccEEEEecCCCcccchhhhHHHHHHHHhc
Q psy463 677 QQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDR--IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 754 (790)
Q Consensus 677 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~ 754 (790)
+........|...++...+.+ + ++|+||+||++|.+||+.++..++++|++.
T Consensus 120 -------------------------~~~~~~~~~~~~~s~~~~~~~~~~-~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~ 173 (213)
T PF00326_consen 120 -------------------------GDPWDNPEFYRELSPISPADNVQI-KPPVLIIHGENDPRVPPSQSLRLYNALRKA 173 (213)
T ss_dssp -------------------------SSTTTSHHHHHHHHHGGGGGGCGG-GSEEEEEEETTBSSSTTHHHHHHHHHHHHT
T ss_pred -------------------------CccchhhhhhhhhccccccccccC-CCCEEEEccCCCCccCHHHHHHHHHHHHhc
Confidence 000112334445555566777 7 899999999999999999999999999999
Q ss_pred CCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhhC
Q psy463 755 DIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790 (790)
Q Consensus 755 g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l~ 790 (790)
|+++++++||+++|.+.. ...++++.+.+||+++|+
T Consensus 174 g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 174 GKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp TSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 999999999999998886 667899999999999986
No 6
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.95 E-value=3.4e-26 Score=240.05 Aligned_cols=167 Identities=36% Similarity=0.729 Sum_probs=143.0
Q ss_pred CCCCEEEEEEEccCCc--EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEc-cCCCEEEEEEccccc
Q psy463 244 NVEPVLSRVNWANESV--VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFS-SDGKKMLLILSHNQE 320 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~--~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~s-pDg~~i~~~~~~~~~ 320 (790)
..+.++..+.|++|++ ++.+.+|.++...+.+||+.+|.++.+..+. ..+|++....+.|. +||..++++. +
T Consensus 181 ~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~-~~~Wv~~~~~~~~~~~~~~~~l~~s----~ 255 (353)
T PF00930_consen 181 PQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEET-SDGWVDVYDPPHFLGPDGNEFLWIS----E 255 (353)
T ss_dssp TSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEE-SSSSSSSSSEEEE-TTTSSEEEEEE----E
T ss_pred CCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEec-CCcceeeecccccccCCCCEEEEEE----E
Confidence 4578899999999999 6788999999999999999999998887665 47899877788886 9999998554 4
Q ss_pred cCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC-CCCCCcc
Q psy463 321 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA-DPTATPE 399 (790)
Q Consensus 321 ~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~ 399 (790)
++| +.|||+++.+++. .++||.|.+++..++.|+++++.|||.++...|..++||+++++ + ++++
T Consensus 256 ~~G------~~hly~~~~~~~~------~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~--~~~~ 321 (353)
T PF00930_consen 256 RDG------YRHLYLYDLDGGK------PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSG--GEPK 321 (353)
T ss_dssp TTS------SEEEEEEETTSSE------EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTET--TEEE
T ss_pred cCC------CcEEEEEcccccc------eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCC--CCeE
Confidence 788 9999999999987 88999999999888999999999999999977888999999999 6 8899
Q ss_pred eeeecccccCCCcccEEEEEEecCCcEEEEEeecCCC
Q psy463 400 CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGI 436 (790)
Q Consensus 400 ~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~ 436 (790)
||||. .....+++|||||++++..+++++.
T Consensus 322 ~LT~~-------~~~~~~~~~Spdg~y~v~~~s~~~~ 351 (353)
T PF00930_consen 322 CLTCE-------DGDHYSASFSPDGKYYVDTYSGPDT 351 (353)
T ss_dssp ESSTT-------SSTTEEEEE-TTSSEEEEEEESSSS
T ss_pred eccCC-------CCCceEEEECCCCCEEEEEEcCCCC
Confidence 99995 2222789999999999999999983
No 7
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.89 E-value=1.9e-21 Score=208.05 Aligned_cols=232 Identities=13% Similarity=0.114 Sum_probs=157.5
Q ss_pred ccccccCCce--EEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEec
Q psy463 113 HLRFSSDGKK--MLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSH 190 (790)
Q Consensus 113 ~~~~spdg~~--i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (790)
.|+|||||++ ++|++.+.+ ..+||++++++++ ..+|+..+..... ..|+|+++. |+|.+.
T Consensus 189 sP~wSPDG~~~~~~y~S~~~g----------~~~I~~~~l~~g~------~~~lt~~~g~~~~-p~wSPDG~~-Laf~s~ 250 (428)
T PRK01029 189 TPTWMHIGSGFPYLYVSYKLG----------VPKIFLGSLENPA------GKKILALQGNQLM-PTFSPRKKL-LAFISD 250 (428)
T ss_pred cceEccCCCceEEEEEEccCC----------CceEEEEECCCCC------ceEeecCCCCccc-eEECCCCCE-EEEEEC
Confidence 5899999987 556775443 2389999999885 5667665443333 588888876 777664
Q ss_pred ccCCCCCCCccccceeEEE--ecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccC
Q psy463 191 NQESDGSTPVDSWDHLTFI--DLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQ 268 (790)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~ 268 (790)
..+. .+||+. +++++.. ..+++++. ........+.|||||+.++++....
T Consensus 251 ~~g~---------~di~~~~~~~~~g~~---g~~~~lt~----------------~~~~~~~~p~wSPDG~~Laf~s~~~ 302 (428)
T PRK01029 251 RYGN---------PDLFIQSFSLETGAI---GKPRRLLN----------------EAFGTQGNPSFSPDGTRLVFVSNKD 302 (428)
T ss_pred CCCC---------cceeEEEeecccCCC---CcceEeec----------------CCCCCcCCeEECCCCCEEEEEECCC
Confidence 2211 467764 5554311 01456661 1123345789999999555554434
Q ss_pred cceEEEEEECCC--CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccC
Q psy463 269 NRARITRCSINE--GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD 346 (790)
Q Consensus 269 ~~~~i~~~~~~~--g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~ 346 (790)
+..+||++++.+ +..+.++.... ....|.|||||++|+|... ..| ..+|+++|+++++
T Consensus 303 g~~~ly~~~~~~~g~~~~~lt~~~~------~~~~p~wSPDG~~Laf~~~----~~g------~~~I~v~dl~~g~---- 362 (428)
T PRK01029 303 GRPRIYIMQIDPEGQSPRLLTKKYR------NSSCPAWSPDGKKIAFCSV----IKG------VRQICVYDLATGR---- 362 (428)
T ss_pred CCceEEEEECcccccceEEeccCCC------CccceeECCCCCEEEEEEc----CCC------CcEEEEEECCCCC----
Confidence 556799998863 44565654321 1357999999999997654 445 5689999999998
Q ss_pred CCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCC
Q psy463 347 KVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNV 424 (790)
Q Consensus 347 ~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg 424 (790)
.++|+.+...... +.|+|||+.|+|.+.... ...||.+++++ ++.+.|+. ..+....++|||-.
T Consensus 363 --~~~Lt~~~~~~~~-p~wSpDG~~L~f~~~~~g--~~~L~~vdl~~--g~~~~Lt~-------~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 363 --DYQLTTSPENKES-PSWAIDSLHLVYSAGNSN--ESELYLISLIT--KKTRKIVI-------GSGEKRFPSWGAFP 426 (428)
T ss_pred --eEEccCCCCCccc-eEECCCCCEEEEEECCCC--CceEEEEECCC--CCEEEeec-------CCCcccCceecCCC
Confidence 8888876433343 899999999999887632 27899999988 67777775 34455678888743
No 8
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.88 E-value=1.4e-20 Score=201.37 Aligned_cols=263 Identities=16% Similarity=0.188 Sum_probs=183.8
Q ss_pred cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCcc-EEEEeccc
Q psy463 114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNP-LLILSHNQ 192 (790)
Q Consensus 114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 192 (790)
|.++ +++|+|+....+...+.+ -.+||++|.+++. .++||.+...... ..|.|+++.. ++|++...
T Consensus 142 ~g~~--~~~iayv~~~~~~~~~~~----~~~l~~~d~dG~~------~~~lt~~~~~~~s-P~wSPDG~~~~~~y~S~~~ 208 (428)
T PRK01029 142 PGIS--SGKIIFSLSTTNSDTELK----QGELWSVDYDGQN------LRPLTQEHSLSIT-PTWMHIGSGFPYLYVSYKL 208 (428)
T ss_pred Cccc--cCEEEEEEeeCCcccccc----cceEEEEcCCCCC------ceEcccCCCCccc-ceEccCCCceEEEEEEccC
Confidence 5555 889999986543322111 2389999998875 6788887554433 4899988653 45565432
Q ss_pred CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463 193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR 272 (790)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~ 272 (790)
+ ..+||++++++|+ ..+|+ ...+....+.|||||+.++++....+..+
T Consensus 209 g---------~~~I~~~~l~~g~------~~~lt-----------------~~~g~~~~p~wSPDG~~Laf~s~~~g~~d 256 (428)
T PRK01029 209 G---------VPKIFLGSLENPA------GKKIL-----------------ALQGNQLMPTFSPRKKLLAFISDRYGNPD 256 (428)
T ss_pred C---------CceEEEEECCCCC------ceEee-----------------cCCCCccceEECCCCCEEEEEECCCCCcc
Confidence 2 2799999999987 55666 44455567999999996666554334445
Q ss_pred EEEE--ECCC---CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCC--CCccc
Q psy463 273 ITRC--SINE---GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD--QAGIK 345 (790)
Q Consensus 273 i~~~--~~~~---g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~--~~~~~ 345 (790)
+|+. ++.+ ++.++++.... .....|.|||||++|+|... .+| ..+||++++++ ++
T Consensus 257 i~~~~~~~~~g~~g~~~~lt~~~~-----~~~~~p~wSPDG~~Laf~s~----~~g------~~~ly~~~~~~~g~~--- 318 (428)
T PRK01029 257 LFIQSFSLETGAIGKPRRLLNEAF-----GTQGNPSFSPDGTRLVFVSN----KDG------RPRIYIMQIDPEGQS--- 318 (428)
T ss_pred eeEEEeecccCCCCcceEeecCCC-----CCcCCeEECCCCCEEEEEEC----CCC------CceEEEEECcccccc---
Confidence 6664 5554 45566764321 11347999999999997553 556 56899998853 43
Q ss_pred CCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCc
Q psy463 346 DKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVS 425 (790)
Q Consensus 346 ~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~ 425 (790)
.++||....... .+.|||||++|+|.+.... ..+|+++++++ ++.++|+. +......+.|||||+
T Consensus 319 ---~~~lt~~~~~~~-~p~wSPDG~~Laf~~~~~g--~~~I~v~dl~~--g~~~~Lt~-------~~~~~~~p~wSpDG~ 383 (428)
T PRK01029 319 ---PRLLTKKYRNSS-CPAWSPDGKKIAFCSVIKG--VRQICVYDLAT--GRDYQLTT-------SPENKESPSWAIDSL 383 (428)
T ss_pred ---eEEeccCCCCcc-ceeECCCCCEEEEEEcCCC--CcEEEEEECCC--CCeEEccC-------CCCCccceEECCCCC
Confidence 667876543333 3899999999999987632 27899999988 77777875 233456799999999
Q ss_pred EEEEEeecCCCCeEEEEecCCCeEEEecc
Q psy463 426 YYVLSCIGPGIPEIMLFDKTGQRLLYWDT 454 (790)
Q Consensus 426 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 454 (790)
+|+|.....+...||++++++++.+.++.
T Consensus 384 ~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~ 412 (428)
T PRK01029 384 HLVYSAGNSNESELYLISLITKKTRKIVI 412 (428)
T ss_pred EEEEEECCCCCceEEEEECCCCCEEEeec
Confidence 99998776667789999998877766643
No 9
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.88 E-value=2.2e-20 Score=198.16 Aligned_cols=235 Identities=10% Similarity=0.077 Sum_probs=174.0
Q ss_pred cEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCC
Q psy463 143 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP 222 (790)
Q Consensus 143 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 222 (790)
.+||+.|.++.. .++++.+. ......|+|++++.++|.+.... ..+||++|+++|+ .
T Consensus 169 ~~l~~~d~dg~~------~~~~~~~~--~~~~p~wSpDG~~~i~y~s~~~~---------~~~Iyv~dl~tg~------~ 225 (419)
T PRK04043 169 SNIVLADYTLTY------QKVIVKGG--LNIFPKWANKEQTAFYYTSYGER---------KPTLYKYNLYTGK------K 225 (419)
T ss_pred ceEEEECCCCCc------eeEEccCC--CeEeEEECCCCCcEEEEEEccCC---------CCEEEEEECCCCc------E
Confidence 399999998774 56677764 44457888887764555554211 2699999999987 5
Q ss_pred ccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCce
Q psy463 223 VPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHL 302 (790)
Q Consensus 223 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~ 302 (790)
++|+ ...+....+.|||||+.++++....+..+||++++++++.++|+.... ....+
T Consensus 226 ~~lt-----------------~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~------~d~~p 282 (419)
T PRK04043 226 EKIA-----------------SSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPG------IDVNG 282 (419)
T ss_pred EEEe-----------------cCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCC------ccCcc
Confidence 6666 445556678999999954444333456789999999999988886542 13478
Q ss_pred eEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCC-
Q psy463 303 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSP- 381 (790)
Q Consensus 303 ~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~- 381 (790)
.|||||++|+|+.. +.| ..+||++|+++++ .+++|.... .. ..|||||+.|+|.+.....
T Consensus 283 ~~SPDG~~I~F~Sd----r~g------~~~Iy~~dl~~g~------~~rlt~~g~--~~-~~~SPDG~~Ia~~~~~~~~~ 343 (419)
T PRK04043 283 NFVEDDKRIVFVSD----RLG------YPNIFMKKLNSGS------VEQVVFHGK--NN-SSVSTYKNYIVYSSRETNNE 343 (419)
T ss_pred EECCCCCEEEEEEC----CCC------CceEEEEECCCCC------eEeCccCCC--cC-ceECCCCCEEEEEEcCCCcc
Confidence 99999999997654 556 6799999999988 778875422 12 5899999999999876321
Q ss_pred ---ceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEe
Q psy463 382 ---IVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYW 452 (790)
Q Consensus 382 ---~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l 452 (790)
...+||.+++++ ++.+.||.. . ....++|||||+.|+|.....+...|+++++++...+.+
T Consensus 344 ~~~~~~~I~v~d~~~--g~~~~LT~~-------~-~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~~~~~l 407 (419)
T PRK04043 344 FGKNTFNLYLISTNS--DYIRRLTAN-------G-VNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYNKSFLF 407 (419)
T ss_pred cCCCCcEEEEEECCC--CCeEECCCC-------C-CcCCeEECCCCCEEEEEEccCCcEEEEEEecCCCeeEEe
Confidence 236899999988 778888862 1 233599999999999997765566799999998766554
No 10
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.88 E-value=1.1e-20 Score=200.61 Aligned_cols=216 Identities=10% Similarity=0.083 Sum_probs=151.9
Q ss_pred ccccccCCce-EEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463 113 HLRFSSDGKK-MLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN 191 (790)
Q Consensus 113 ~~~~spdg~~-i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (790)
.|.|||||++ ++|++...+ ..+||++++.+++ ..+|+..+... ....|+|++++ ++|....
T Consensus 192 ~p~wSpDG~~~i~y~s~~~~----------~~~Iyv~dl~tg~------~~~lt~~~g~~-~~~~~SPDG~~-la~~~~~ 253 (419)
T PRK04043 192 FPKWANKEQTAFYYTSYGER----------KPTLYKYNLYTGK------KEKIASSQGML-VVSDVSKDGSK-LLLTMAP 253 (419)
T ss_pred eEEECCCCCcEEEEEEccCC----------CCEEEEEECCCCc------EEEEecCCCcE-EeeEECCCCCE-EEEEEcc
Confidence 5799999996 666665432 1289999998885 56676644332 23568888776 5555543
Q ss_pred cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcce
Q psy463 192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRA 271 (790)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~ 271 (790)
.. ..+||++++++++ .++|| ........+.|||||+.+++++...+..
T Consensus 254 ~g---------~~~Iy~~dl~~g~------~~~LT-----------------~~~~~d~~p~~SPDG~~I~F~Sdr~g~~ 301 (419)
T PRK04043 254 KG---------QPDIYLYDTNTKT------LTQIT-----------------NYPGIDVNGNFVEDDKRIVFVSDRLGYP 301 (419)
T ss_pred CC---------CcEEEEEECCCCc------EEEcc-----------------cCCCccCccEECCCCCEEEEEECCCCCc
Confidence 11 2799999999887 56666 4444456789999999555554444567
Q ss_pred EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463 272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP 351 (790)
Q Consensus 272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 351 (790)
+||++++++|+.++++... ...+.|||||+.|+|+.. +.+.. ......+|+++|+++++ .++
T Consensus 302 ~Iy~~dl~~g~~~rlt~~g--------~~~~~~SPDG~~Ia~~~~---~~~~~-~~~~~~~I~v~d~~~g~------~~~ 363 (419)
T PRK04043 302 NIFMKKLNSGSVEQVVFHG--------KNNSSVSTYKNYIVYSSR---ETNNE-FGKNTFNLYLISTNSDY------IRR 363 (419)
T ss_pred eEEEEECCCCCeEeCccCC--------CcCceECCCCCEEEEEEc---CCCcc-cCCCCcEEEEEECCCCC------eEE
Confidence 8999999999998887542 114699999999998765 22110 00003589999999998 889
Q ss_pred ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463 352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT 402 (790)
Q Consensus 352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt 402 (790)
||.+... ..++|+|||+.|+|.+..+. ...|+.+++++ .....|.
T Consensus 364 LT~~~~~--~~p~~SPDG~~I~f~~~~~~--~~~L~~~~l~g--~~~~~l~ 408 (419)
T PRK04043 364 LTANGVN--QFPRFSSDGGSIMFIKYLGN--QSALGIIRLNY--NKSFLFP 408 (419)
T ss_pred CCCCCCc--CCeEECCCCCEEEEEEccCC--cEEEEEEecCC--CeeEEee
Confidence 9986432 24899999999999988733 37899999987 4444443
No 11
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.87 E-value=1.6e-17 Score=173.43 Aligned_cols=489 Identities=16% Similarity=0.146 Sum_probs=310.9
Q ss_pred cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463 114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE 193 (790)
Q Consensus 114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (790)
.+.|||++.+++..+..+. .+| .|-+.++.++. .....+++ +..-..|.++++. ++|.+..+.
T Consensus 134 ~~~s~D~~~la~s~D~~G~--e~y------~lr~kdL~tg~----~~~d~i~~----~~~~~~Wa~d~~~-lfYt~~d~~ 196 (682)
T COG1770 134 ASISPDHNLLAYSVDVLGD--EQY------TLRFKDLATGE----ELPDEITN----TSGSFAWAADGKT-LFYTRLDEN 196 (682)
T ss_pred eeeCCCCceEEEEEecccc--cEE------EEEEEeccccc----ccchhhcc----cccceEEecCCCe-EEEEEEcCC
Confidence 3669999999998754432 333 67788888874 22222322 2233467666654 777765433
Q ss_pred CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463 194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI 273 (790)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i 273 (790)
. +-..||.-.+.+.... .+.+- + +..+.....+.=|...++++....+....++
T Consensus 197 ~-------rp~kv~~h~~gt~~~~----d~lvy------------e---E~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~ 250 (682)
T COG1770 197 H-------RPDKVWRHRLGTPGSS----DELVY------------E---EKDDRFFLSVGRSRSEAYIVISLGSHITSEV 250 (682)
T ss_pred C-------CcceEEEEecCCCCCc----ceEEE------------E---cCCCcEEEEeeeccCCceEEEEcCCCcceeE
Confidence 2 2257777777662110 11111 1 1444555566666677766666555666778
Q ss_pred EEEECCCCc--eeEEEEEeCCCcccccCCceeEccC--CCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCc
Q psy463 274 TRCSINEGT--CDVVFSRDLDRGWFEPFDHLRFSSD--GKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP 349 (790)
Q Consensus 274 ~~~~~~~g~--~~~l~~~~~~~~~~~~~~~~~~spD--g~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~ 349 (790)
++++.+... .+.+...+. ...++.| |..+++..+ ..|. ...|+...+...+ . .-
T Consensus 251 ~ll~a~~p~~~p~vv~pr~~---------g~eY~~eh~~d~f~i~sN----~~gk-----nf~l~~ap~~~~~--~--~w 308 (682)
T COG1770 251 RLLDADDPEAEPKVVLPREN---------GVEYSVEHGGDRFYILSN----ADGK-----NFKLVRAPVSADK--S--NW 308 (682)
T ss_pred EEEecCCCCCceEEEEEcCC---------CcEEeeeecCcEEEEEec----CCCc-----ceEEEEccCCCCh--h--cC
Confidence 888887643 344444321 2223222 555554333 4452 4567766652111 0 01
Q ss_pred ccccCCCeEEeEEEeeecCCCEEEEEEcC-CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEE--EEEEecCCcE
Q psy463 350 VPLTRGRFTVTEILAWDEKENNVYFLSTQ-GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYS--GATFSTNVSY 426 (790)
Q Consensus 350 ~~lt~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~--~~~~s~dg~~ 426 (790)
+.+..+...+. .-.++-=.+.|+..-.. +- ..|+..+... ++...|... ...... +.+--++...
T Consensus 309 ~~~I~h~~~~~-l~~~~~f~~~lVl~eR~~gl---p~v~v~~~~~--~~~~~i~f~------~~ay~~~l~~~~e~~s~~ 376 (682)
T COG1770 309 RELIPHREDVR-LEGVDLFADHLVLLERQEGL---PRVVVRDRKT--GEERGIAFD------DEAYSAGLSGNPEFDSDR 376 (682)
T ss_pred eeeeccCCCce-eeeeeeeccEEEEEecccCC---ceEEEEecCC--CceeeEEec------chhhhccccCCCCCCCcc
Confidence 12222222111 12233234556655544 33 5677777654 444444432 111111 1222345678
Q ss_pred EEEEeecCC-CCeEEEEecCCCeEEEeccchhHHHhhccCCCC--ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccE
Q psy463 427 YVLSCIGPG-IPEIMLFDKTGQRLLYWDTNEDLRTALTNITLP--SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPL 503 (790)
Q Consensus 427 ~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~ 503 (790)
|-+++++.+ |.+++=+|+.+++.+.+-..+- ..++... ..+.+..+..||.+|+..++.-++.. ..++.|+
T Consensus 377 lR~~ysS~ttP~~~~~~dm~t~er~~LkqqeV----~~g~dp~~Y~s~riwa~a~dgv~VPVSLvyrkd~~--~~g~~p~ 450 (682)
T COG1770 377 LRYSYSSMTTPATLFDYDMATGERTLLKQQEV----PGGFDPEDYVSRRIWATADDGVQVPVSLVYRKDTK--LDGSAPL 450 (682)
T ss_pred EEEEeecccccceeEEeeccCCcEEEEEeccC----CCCCChhHeEEEEEEEEcCCCcEeeEEEEEecccC--CCCCCcE
Confidence 889998888 8889999999987776644331 1224433 35677888889999999888776654 5677899
Q ss_pred EEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCC
Q psy463 504 LIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDK 583 (790)
Q Consensus 504 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~ 583 (790)
+++.+|.-+... ...|+.. +..++ ++|++......||.+.-|+.|...+........+.|++++.++|.+ .++.+.
T Consensus 451 lLygYGaYG~s~-~p~Fs~~-~lSLl-DRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~-~g~~~~ 526 (682)
T COG1770 451 LLYGYGAYGISM-DPSFSIA-RLSLL-DRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVK-EGYTSP 526 (682)
T ss_pred EEEEeccccccC-CcCcccc-eeeee-cCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHH-cCcCCc
Confidence 999999877633 4444421 22233 5899999999999999999998887766667889999999999998 899999
Q ss_pred CceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc--c-------cccchhhhcCCCCccCchhhhhhccccch
Q psy463 584 TRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY--Y-------DTIYSERYMGLPTFEDNLEGYKIAALNNK 654 (790)
Q Consensus 584 ~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~--~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 654 (790)
++|+++|.|.||.+...++...|+ .|+++|+..|+.|... . ...|.| +|.|...+.-.-+...+|...
T Consensus 527 ~~i~a~GGSAGGmLmGav~N~~P~-lf~~iiA~VPFVDvltTMlD~slPLT~~E~~E--WGNP~d~e~y~yikSYSPYdN 603 (682)
T COG1770 527 DRIVAIGGSAGGMLMGAVANMAPD-LFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDE--WGNPLDPEYYDYIKSYSPYDN 603 (682)
T ss_pred cceEEeccCchhHHHHHHHhhChh-hhhheeecCCccchhhhhcCCCCCCCccchhh--hCCcCCHHHHHHHhhcCchhc
Confidence 999999999999999999998885 9999999999887542 1 123333 266632222223345677777
Q ss_pred hhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcc
Q psy463 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM 692 (790)
Q Consensus 655 ~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~ 692 (790)
+..-.-+++|+..|..|++|..-+..+++..|......
T Consensus 604 V~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td 641 (682)
T COG1770 604 VEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTD 641 (682)
T ss_pred cccCCCCceEEEccccCCccccchHHHHHHHHhhcccC
Confidence 76655579999999999999999999999999876554
No 12
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.87 E-value=2.3e-20 Score=202.48 Aligned_cols=226 Identities=10% Similarity=0.121 Sum_probs=157.9
Q ss_pred ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463 113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ 192 (790)
Q Consensus 113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (790)
.|+|||||++|+|.+...+ ..+||++++.++. ..+++..+..+ .-..|+|+++. ++|.....
T Consensus 206 ~p~wSpDG~~lay~s~~~g----------~~~i~~~dl~~g~------~~~l~~~~g~~-~~~~~SPDG~~-la~~~~~~ 267 (435)
T PRK05137 206 TPRFSPNRQEITYMSYANG----------RPRVYLLDLETGQ------RELVGNFPGMT-FAPRFSPDGRK-VVMSLSQG 267 (435)
T ss_pred eeEECCCCCEEEEEEecCC----------CCEEEEEECCCCc------EEEeecCCCcc-cCcEECCCCCE-EEEEEecC
Confidence 5799999999999885433 1389999998874 45566544322 23578887765 55554321
Q ss_pred CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463 193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR 272 (790)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~ 272 (790)
...+||++|+++++ ..+|+ ........+.|||||+.+++.....+..+
T Consensus 268 ---------g~~~Iy~~d~~~~~------~~~Lt-----------------~~~~~~~~~~~spDG~~i~f~s~~~g~~~ 315 (435)
T PRK05137 268 ---------GNTDIYTMDLRSGT------TTRLT-----------------DSPAIDTSPSYSPDGSQIVFESDRSGSPQ 315 (435)
T ss_pred ---------CCceEEEEECCCCc------eEEcc-----------------CCCCccCceeEcCCCCEEEEEECCCCCCe
Confidence 12689999999887 45666 44445667999999995555544444568
Q ss_pred EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463 273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL 352 (790)
Q Consensus 273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l 352 (790)
||++++++++.++++...+ ....+.|||||+.|+|... ..+ ..+|++++++++. .+.+
T Consensus 316 Iy~~d~~g~~~~~lt~~~~------~~~~~~~SpdG~~ia~~~~----~~~------~~~i~~~d~~~~~------~~~l 373 (435)
T PRK05137 316 LYVMNADGSNPRRISFGGG------RYSTPVWSPRGDLIAFTKQ----GGG------QFSIGVMKPDGSG------ERIL 373 (435)
T ss_pred EEEEECCCCCeEEeecCCC------cccCeEECCCCCEEEEEEc----CCC------ceEEEEEECCCCc------eEec
Confidence 9999999998888876422 1346999999999997654 334 4589999998776 6677
Q ss_pred cCCCeEEeEEEeeecCCCEEEEEEcCCCC-ceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEec
Q psy463 353 TRGRFTVTEILAWDEKENNVYFLSTQGSP-IVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFST 422 (790)
Q Consensus 353 t~~~~~~~~~~~~s~dg~~l~~~~~~~~~-~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~ 422 (790)
+.+. ... .+.|+|||+.|+|.+..... ....||.+++++ +..+.|+. .+....+.|||
T Consensus 374 t~~~-~~~-~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g--~~~~~l~~--------~~~~~~p~Wsp 432 (435)
T PRK05137 374 TSGF-LVE-GPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTG--RNEREVPT--------PGDASDPAWSP 432 (435)
T ss_pred cCCC-CCC-CCeECCCCCEEEEEEccCCCCCcceEEEEECCC--CceEEccC--------CCCccCcccCC
Confidence 7643 333 48999999999999876321 125899999987 55555543 22355677876
No 13
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.87 E-value=2.7e-20 Score=200.38 Aligned_cols=226 Identities=17% Similarity=0.133 Sum_probs=158.5
Q ss_pred CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463 112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN 191 (790)
Q Consensus 112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (790)
..|+|||||++|+|.+...+ ..+||++++.+++ ..+++..+.... -..|+|+++. ++|....
T Consensus 202 ~~p~wSPDG~~la~~s~~~g----------~~~i~i~dl~~G~------~~~l~~~~~~~~-~~~~SPDG~~-La~~~~~ 263 (429)
T PRK03629 202 MSPAWSPDGSKLAYVTFESG----------RSALVIQTLANGA------VRQVASFPRHNG-APAFSPDGSK-LAFALSK 263 (429)
T ss_pred eeeEEcCCCCEEEEEEecCC----------CcEEEEEECCCCC------eEEccCCCCCcC-CeEECCCCCE-EEEEEcC
Confidence 35899999999999875332 2389999998874 445554433222 2578888775 6665432
Q ss_pred cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcce
Q psy463 192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRA 271 (790)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~ 271 (790)
.. ..+||++|+++++ ..+++ ........+.|||||+.++++....+..
T Consensus 264 ~g---------~~~I~~~d~~tg~------~~~lt-----------------~~~~~~~~~~wSPDG~~I~f~s~~~g~~ 311 (429)
T PRK03629 264 TG---------SLNLYVMDLASGQ------IRQVT-----------------DGRSNNTEPTWFPDSQNLAYTSDQAGRP 311 (429)
T ss_pred CC---------CcEEEEEECCCCC------EEEcc-----------------CCCCCcCceEECCCCCEEEEEeCCCCCc
Confidence 11 2579999999886 45666 3344567899999999555554434456
Q ss_pred EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463 272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP 351 (790)
Q Consensus 272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 351 (790)
+||.+++++++.++++.... ....+.|||||+.|+|... ..+ ..+|+++|+++++ .+.
T Consensus 312 ~Iy~~d~~~g~~~~lt~~~~------~~~~~~~SpDG~~Ia~~~~----~~g------~~~I~~~dl~~g~------~~~ 369 (429)
T PRK03629 312 QVYKVNINGGAPQRITWEGS------QNQDADVSSDGKFMVMVSS----NGG------QQHIAKQDLATGG------VQV 369 (429)
T ss_pred eEEEEECCCCCeEEeecCCC------CccCEEECCCCCEEEEEEc----cCC------CceEEEEECCCCC------eEE
Confidence 89999999998887765321 1347999999999997654 344 4589999999887 788
Q ss_pred ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEec
Q psy463 352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFST 422 (790)
Q Consensus 352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~ 422 (790)
|+... ... .+.|+|||+.|+|.+.++. ...|+.+++++ +..+.|+. ..+....++|||
T Consensus 370 Lt~~~-~~~-~p~~SpDG~~i~~~s~~~~--~~~l~~~~~~G--~~~~~l~~-------~~~~~~~p~Wsp 427 (429)
T PRK03629 370 LTDTF-LDE-TPSIAPNGTMVIYSSSQGM--GSVLNLVSTDG--RFKARLPA-------TDGQVKFPAWSP 427 (429)
T ss_pred eCCCC-CCC-CceECCCCCEEEEEEcCCC--ceEEEEEECCC--CCeEECcc-------CCCCcCCcccCC
Confidence 88543 222 3899999999999998743 26799999987 55555543 234456678876
No 14
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.86 E-value=5e-20 Score=198.62 Aligned_cols=226 Identities=14% Similarity=0.138 Sum_probs=156.9
Q ss_pred CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463 112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN 191 (790)
Q Consensus 112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (790)
..|+|||||++|+|.+.... ..+||++++.+++ ..+++..+.. .....|+|+++. ++|....
T Consensus 199 ~~p~wSPDG~~la~~s~~~~----------~~~I~~~dl~~g~------~~~l~~~~g~-~~~~~~SPDG~~-la~~~~~ 260 (427)
T PRK02889 199 ISPAWSPDGTKLAYVSFESK----------KPVVYVHDLATGR------RRVVANFKGS-NSAPAWSPDGRT-LAVALSR 260 (427)
T ss_pred ccceEcCCCCEEEEEEccCC----------CcEEEEEECCCCC------EEEeecCCCC-ccceEECCCCCE-EEEEEcc
Confidence 35799999999999875432 2389999998874 4455544322 224678888775 5554432
Q ss_pred cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcce
Q psy463 192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRA 271 (790)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~ 271 (790)
. ...+||.+++++++ ..+++ ........+.|||||+.++++....+..
T Consensus 261 ~---------g~~~Iy~~d~~~~~------~~~lt-----------------~~~~~~~~~~wSpDG~~l~f~s~~~g~~ 308 (427)
T PRK02889 261 D---------GNSQIYTVNADGSG------LRRLT-----------------QSSGIDTEPFFSPDGRSIYFTSDRGGAP 308 (427)
T ss_pred C---------CCceEEEEECCCCC------cEECC-----------------CCCCCCcCeEEcCCCCEEEEEecCCCCc
Confidence 1 12699999998876 45555 3334456789999999555554434456
Q ss_pred EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463 272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP 351 (790)
Q Consensus 272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 351 (790)
+||.++++++..+.++.... + ...+.|||||++|+|... ..+ ..+|+++|+++++ .++
T Consensus 309 ~Iy~~~~~~g~~~~lt~~g~---~---~~~~~~SpDG~~Ia~~s~----~~g------~~~I~v~d~~~g~------~~~ 366 (427)
T PRK02889 309 QIYRMPASGGAAQRVTFTGS---Y---NTSPRISPDGKLLAYISR----VGG------AFKLYVQDLATGQ------VTA 366 (427)
T ss_pred EEEEEECCCCceEEEecCCC---C---cCceEECCCCCEEEEEEc----cCC------cEEEEEEECCCCC------eEE
Confidence 89999999888877764321 1 336999999999996554 334 4589999999887 778
Q ss_pred ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEec
Q psy463 352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFST 422 (790)
Q Consensus 352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~ 422 (790)
|+.+... ..+.|+|||+.|+|.+..+. ...||.+++++ ...+.++. ..+....++|||
T Consensus 367 lt~~~~~--~~p~~spdg~~l~~~~~~~g--~~~l~~~~~~g--~~~~~l~~-------~~g~~~~p~wsp 424 (427)
T PRK02889 367 LTDTTRD--ESPSFAPNGRYILYATQQGG--RSVLAAVSSDG--RIKQRLSV-------QGGDVREPSWGP 424 (427)
T ss_pred ccCCCCc--cCceECCCCCEEEEEEecCC--CEEEEEEECCC--CceEEeec-------CCCCCCCCccCC
Confidence 8865432 34899999999999998743 27899999866 44444442 234556677876
No 15
>KOG1455|consensus
Probab=99.86 E-value=1.1e-20 Score=179.20 Aligned_cols=279 Identities=16% Similarity=0.169 Sum_probs=177.8
Q ss_pred EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463 471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT 550 (790)
Q Consensus 471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~ 550 (790)
..-.++..+|..+....+.|.. ..+...+|+++||.++.. .|.+.-....++..||.|+.+|++|+|.+..-
T Consensus 28 ~~~~~~n~rG~~lft~~W~p~~----~~~pr~lv~~~HG~g~~~----s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl 99 (313)
T KOG1455|consen 28 SESFFTNPRGAKLFTQSWLPLS----GTEPRGLVFLCHGYGEHS----SWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGL 99 (313)
T ss_pred eeeeEEcCCCCEeEEEecccCC----CCCCceEEEEEcCCcccc----hhhHHHHHHHHHhCCCeEEEeeccCCCcCCCC
Confidence 3446677799999999999975 346677999999987752 22333233444558999999999998875532
Q ss_pred hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccch
Q psy463 551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYS 630 (790)
Q Consensus 551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~ 630 (790)
..+-.--...++|+...++.++. ......-..+++||||||.+++.++.++|. .+.++++++|+.......
T Consensus 100 ---~~yi~~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~-~w~G~ilvaPmc~i~~~~---- 170 (313)
T KOG1455|consen 100 ---HAYVPSFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGGAVALLIALKDPN-FWDGAILVAPMCKISEDT---- 170 (313)
T ss_pred ---cccCCcHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcchHHHHHHHhhCCc-ccccceeeecccccCCcc----
Confidence 11111111347777777777666 333334589999999999999999999885 999999999986543210
Q ss_pred hhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchh
Q psy463 631 ERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG 710 (790)
Q Consensus 631 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 710 (790)
.........+..+.++.. ...++... | ...........+.+...++ ..|.+.|......+.
T Consensus 171 ------------kp~p~v~~~l~~l~~liP-~wk~vp~~-d-~~~~~~kdp~~r~~~~~np----l~y~g~pRl~T~~El 231 (313)
T KOG1455|consen 171 ------------KPHPPVISILTLLSKLIP-TWKIVPTK-D-IIDVAFKDPEKRKILRSDP----LCYTGKPRLKTAYEL 231 (313)
T ss_pred ------------CCCcHHHHHHHHHHHhCC-ceeecCCc-c-ccccccCCHHHHHHhhcCC----ceecCCccHHHHHHH
Confidence 000111111111222210 11111111 1 0000011111111222222 244555544444444
Q ss_pred hhhhh-hhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-----cchHHHHHHHHH
Q psy463 711 YKIAA-LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-----VRPHFYHTLERF 784 (790)
Q Consensus 711 ~~~~~-~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-----~~~~~~~~i~~f 784 (790)
.+... +..++.++ ..|+|++||+.|.++.+..+++||+......+ ++.+|||+.|.+.. +.+.++..|.+|
T Consensus 232 Lr~~~~le~~l~~v-tvPflilHG~dD~VTDp~~Sk~Lye~A~S~DK--TlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~W 308 (313)
T KOG1455|consen 232 LRVTADLEKNLNEV-TVPFLILHGTDDKVTDPKVSKELYEKASSSDK--TLKLYPGMWHSLLSGEPDENVEIVFGDIISW 308 (313)
T ss_pred HHHHHHHHHhcccc-cccEEEEecCCCcccCcHHHHHHHHhccCCCC--ceeccccHHHHhhcCCCchhHHHHHHHHHHH
Confidence 33332 34667788 99999999999999999999999999888755 78899999999884 677899999999
Q ss_pred HHHh
Q psy463 785 LDSC 788 (790)
Q Consensus 785 l~~~ 788 (790)
|+++
T Consensus 309 l~~r 312 (313)
T KOG1455|consen 309 LDER 312 (313)
T ss_pred HHhc
Confidence 9875
No 16
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.86 E-value=6.8e-20 Score=198.72 Aligned_cols=252 Identities=14% Similarity=0.178 Sum_probs=180.6
Q ss_pred ceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCc
Q psy463 121 KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPV 200 (790)
Q Consensus 121 ~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (790)
.+|+|++...+.... ..+||++|.++.. .+++|.+...+. -..|.|+++. ++|.+....
T Consensus 166 ~~iafv~~~~~~~~~------~~~l~~~d~dg~~------~~~lt~~~~~v~-~p~wSpDG~~-lay~s~~~g------- 224 (435)
T PRK05137 166 TRIVYVAESGPKNKR------IKRLAIMDQDGAN------VRYLTDGSSLVL-TPRFSPNRQE-ITYMSYANG------- 224 (435)
T ss_pred CeEEEEEeeCCCCCc------ceEEEEECCCCCC------cEEEecCCCCeE-eeEECCCCCE-EEEEEecCC-------
Confidence 589998764332111 3489999997764 577887765544 3578887764 777764321
Q ss_pred cccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCC
Q psy463 201 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINE 280 (790)
Q Consensus 201 ~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~ 280 (790)
..+||++++++|+ ..+++ ...+....+.|||||+.++++....+..+||++++++
T Consensus 225 --~~~i~~~dl~~g~------~~~l~-----------------~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~ 279 (435)
T PRK05137 225 --RPRVYLLDLETGQ------RELVG-----------------NFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRS 279 (435)
T ss_pred --CCEEEEEECCCCc------EEEee-----------------cCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCC
Confidence 2699999999887 44454 3444556889999999555443333456799999999
Q ss_pred CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEe
Q psy463 281 GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT 360 (790)
Q Consensus 281 g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~ 360 (790)
++.++|+.... ....+.|||||++|+|... ..| ..+||++|+++++ .++|+.+.....
T Consensus 280 ~~~~~Lt~~~~------~~~~~~~spDG~~i~f~s~----~~g------~~~Iy~~d~~g~~------~~~lt~~~~~~~ 337 (435)
T PRK05137 280 GTTTRLTDSPA------IDTSPSYSPDGSQIVFESD----RSG------SPQLYVMNADGSN------PRRISFGGGRYS 337 (435)
T ss_pred CceEEccCCCC------ccCceeEcCCCCEEEEEEC----CCC------CCeEEEEECCCCC------eEEeecCCCccc
Confidence 99888876432 1447999999999996543 556 5689999999887 888886543333
Q ss_pred EEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCC---C
Q psy463 361 EILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGI---P 437 (790)
Q Consensus 361 ~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~---~ 437 (790)
. +.|+|||+.|+|.+.... ..+|+.+++++ +..+.++.. .....++|||||+.|+|.....+. .
T Consensus 338 ~-~~~SpdG~~ia~~~~~~~--~~~i~~~d~~~--~~~~~lt~~--------~~~~~p~~spDG~~i~~~~~~~~~~~~~ 404 (435)
T PRK05137 338 T-PVWSPRGDLIAFTKQGGG--QFSIGVMKPDG--SGERILTSG--------FLVEGPTWAPNGRVIMFFRQTPGSGGAP 404 (435)
T ss_pred C-eEECCCCCEEEEEEcCCC--ceEEEEEECCC--CceEeccCC--------CCCCCCeECCCCCEEEEEEccCCCCCcc
Confidence 3 789999999999886522 27899999876 455555542 245678999999999998765553 6
Q ss_pred eEEEEecCCCeEEEec
Q psy463 438 EIMLFDKTGQRLLYWD 453 (790)
Q Consensus 438 ~i~~~~~~~~~~~~l~ 453 (790)
.|+++++++++.+.+.
T Consensus 405 ~L~~~dl~g~~~~~l~ 420 (435)
T PRK05137 405 KLYTVDLTGRNEREVP 420 (435)
T ss_pred eEEEEECCCCceEEcc
Confidence 8999999887666554
No 17
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.85 E-value=1.4e-19 Score=195.59 Aligned_cols=226 Identities=14% Similarity=0.151 Sum_probs=157.8
Q ss_pred CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463 112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN 191 (790)
Q Consensus 112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (790)
..|+|||||++|+|.+...+ ..+||++++.+++ ..+++..+... .-..|+|+++. ++|....
T Consensus 221 ~~p~wSPDG~~La~~s~~~g----------~~~L~~~dl~tg~------~~~lt~~~g~~-~~~~wSPDG~~-La~~~~~ 282 (448)
T PRK04792 221 MSPAWSPDGRKLAYVSFENR----------KAEIFVQDIYTQV------REKVTSFPGIN-GAPRFSPDGKK-LALVLSK 282 (448)
T ss_pred cCceECCCCCEEEEEEecCC----------CcEEEEEECCCCC------eEEecCCCCCc-CCeeECCCCCE-EEEEEeC
Confidence 46899999999999875432 2389999998874 34555443221 23578888775 5555432
Q ss_pred cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcce
Q psy463 192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRA 271 (790)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~ 271 (790)
. ...+||++++++++ ..+++ ........+.|||||+.++++....+..
T Consensus 283 ~---------g~~~Iy~~dl~tg~------~~~lt-----------------~~~~~~~~p~wSpDG~~I~f~s~~~g~~ 330 (448)
T PRK04792 283 D---------GQPEIYVVDIATKA------LTRIT-----------------RHRAIDTEPSWHPDGKSLIFTSERGGKP 330 (448)
T ss_pred C---------CCeEEEEEECCCCC------eEECc-----------------cCCCCccceEECCCCCEEEEEECCCCCc
Confidence 1 12689999999887 45555 3334456799999999555554434457
Q ss_pred EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463 272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP 351 (790)
Q Consensus 272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 351 (790)
+||++++++++.+.|+... .+ ...+.|||||+.|+|... ..+ ..+|+++|+++++ .+.
T Consensus 331 ~Iy~~dl~~g~~~~Lt~~g---~~---~~~~~~SpDG~~l~~~~~----~~g------~~~I~~~dl~~g~------~~~ 388 (448)
T PRK04792 331 QIYRVNLASGKVSRLTFEG---EQ---NLGGSITPDGRSMIMVNR----TNG------KFNIARQDLETGA------MQV 388 (448)
T ss_pred eEEEEECCCCCEEEEecCC---CC---CcCeeECCCCCEEEEEEe----cCC------ceEEEEEECCCCC------eEE
Confidence 8999999999888886432 11 236899999999997544 344 4589999999887 778
Q ss_pred ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEec
Q psy463 352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFST 422 (790)
Q Consensus 352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~ 422 (790)
|+...... .+.|+|||+.|+|.+..+. ...||.++.++ +..+.++. ..+....++|||
T Consensus 389 lt~~~~d~--~ps~spdG~~I~~~~~~~g--~~~l~~~~~~G--~~~~~l~~-------~~g~~~~p~Wsp 446 (448)
T PRK04792 389 LTSTRLDE--SPSVAPNGTMVIYSTTYQG--KQVLAAVSIDG--RFKARLPA-------GQGEVKSPAWSP 446 (448)
T ss_pred ccCCCCCC--CceECCCCCEEEEEEecCC--ceEEEEEECCC--CceEECcC-------CCCCcCCCccCC
Confidence 88654322 3789999999999987743 26799999876 44555543 234456677876
No 18
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.85 E-value=1.8e-19 Score=193.89 Aligned_cols=251 Identities=12% Similarity=0.099 Sum_probs=179.9
Q ss_pred ceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCc
Q psy463 121 KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPV 200 (790)
Q Consensus 121 ~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (790)
++|+|+.....+ . | ..+||++|.++.. ..++|.+...+. -..|+|+++. ++|++....
T Consensus 164 ~riayv~~~~~~-~--~----~~~l~~~d~dg~~------~~~lt~~~~~~~-~p~wSPDG~~-la~~s~~~g------- 221 (429)
T PRK03629 164 TRIAYVVQTNGG-Q--F----PYELRVSDYDGYN------QFVVHRSPQPLM-SPAWSPDGSK-LAYVTFESG------- 221 (429)
T ss_pred CeEEEEEeeCCC-C--c----ceeEEEEcCCCCC------CEEeecCCCcee-eeEEcCCCCE-EEEEEecCC-------
Confidence 788988764332 1 1 3489999998764 567787764433 4588888765 666653211
Q ss_pred cccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCC
Q psy463 201 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINE 280 (790)
Q Consensus 201 ~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~ 280 (790)
...||++++++|+ .++++ ........+.|||||+.++++....+..+||++|+++
T Consensus 222 --~~~i~i~dl~~G~------~~~l~-----------------~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~t 276 (429)
T PRK03629 222 --RSALVIQTLANGA------VRQVA-----------------SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS 276 (429)
T ss_pred --CcEEEEEECCCCC------eEEcc-----------------CCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 2689999999887 44444 3333445789999999666654434455699999999
Q ss_pred CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEe
Q psy463 281 GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT 360 (790)
Q Consensus 281 g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~ 360 (790)
++.++++.... ....+.|||||+.|+|... ..| ..+||++++++++ .++|+.......
T Consensus 277 g~~~~lt~~~~------~~~~~~wSPDG~~I~f~s~----~~g------~~~Iy~~d~~~g~------~~~lt~~~~~~~ 334 (429)
T PRK03629 277 GQIRQVTDGRS------NNTEPTWFPDSQNLAYTSD----QAG------RPQVYKVNINGGA------PQRITWEGSQNQ 334 (429)
T ss_pred CCEEEccCCCC------CcCceEECCCCCEEEEEeC----CCC------CceEEEEECCCCC------eEEeecCCCCcc
Confidence 99888875421 1458999999999996543 556 5699999999887 777775432222
Q ss_pred EEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEE
Q psy463 361 EILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIM 440 (790)
Q Consensus 361 ~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~ 440 (790)
.+.|+|||+.|+|.+..+. ..+|+.+++++ ++.+.|+.. .....++|||||+++++.....+...++
T Consensus 335 -~~~~SpDG~~Ia~~~~~~g--~~~I~~~dl~~--g~~~~Lt~~--------~~~~~p~~SpDG~~i~~~s~~~~~~~l~ 401 (429)
T PRK03629 335 -DADVSSDGKFMVMVSSNGG--QQHIAKQDLAT--GGVQVLTDT--------FLDETPSIAPNGTMVIYSSSQGMGSVLN 401 (429)
T ss_pred -CEEECCCCCEEEEEEccCC--CceEEEEECCC--CCeEEeCCC--------CCCCCceECCCCCEEEEEEcCCCceEEE
Confidence 3789999999999887632 26899999987 677777742 2234689999999999988765566789
Q ss_pred EEecCCCeEEEec
Q psy463 441 LFDKTGQRLLYWD 453 (790)
Q Consensus 441 ~~~~~~~~~~~l~ 453 (790)
+++++++..+.+.
T Consensus 402 ~~~~~G~~~~~l~ 414 (429)
T PRK03629 402 LVSTDGRFKARLP 414 (429)
T ss_pred EEECCCCCeEECc
Confidence 9999887666553
No 19
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.85 E-value=1.8e-19 Score=195.06 Aligned_cols=226 Identities=15% Similarity=0.195 Sum_probs=157.4
Q ss_pred CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463 112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN 191 (790)
Q Consensus 112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (790)
..|+|||||++|+|.+.... ..+||++++.+++ ..+++..+.. ..-..|+++++. ++|....
T Consensus 207 ~~p~wSpDg~~la~~s~~~~----------~~~l~~~dl~~g~------~~~l~~~~g~-~~~~~~SpDG~~-l~~~~s~ 268 (433)
T PRK04922 207 LSPAWSPDGKKLAYVSFERG----------RSAIYVQDLATGQ------RELVASFRGI-NGAPSFSPDGRR-LALTLSR 268 (433)
T ss_pred ccccCCCCCCEEEEEecCCC----------CcEEEEEECCCCC------EEEeccCCCC-ccCceECCCCCE-EEEEEeC
Confidence 35799999999999875332 2389999998874 4455544322 223578888775 5554432
Q ss_pred cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcce
Q psy463 192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRA 271 (790)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~ 271 (790)
.. ..+||++++++++ ..+++ ........+.|||||+.++++....+..
T Consensus 269 ~g---------~~~Iy~~d~~~g~------~~~lt-----------------~~~~~~~~~~~spDG~~l~f~sd~~g~~ 316 (433)
T PRK04922 269 DG---------NPEIYVMDLGSRQ------LTRLT-----------------NHFGIDTEPTWAPDGKSIYFTSDRGGRP 316 (433)
T ss_pred CC---------CceEEEEECCCCC------eEECc-----------------cCCCCccceEECCCCCEEEEEECCCCCc
Confidence 11 2689999999886 44555 3333446789999999555554333456
Q ss_pred EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463 272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP 351 (790)
Q Consensus 272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 351 (790)
+||.+++++++.++++.... + ...+.|||||+.|+|... ..+ ..+|+++|+.+++ .+.
T Consensus 317 ~iy~~dl~~g~~~~lt~~g~---~---~~~~~~SpDG~~Ia~~~~----~~~------~~~I~v~d~~~g~------~~~ 374 (433)
T PRK04922 317 QIYRVAASGGSAERLTFQGN---Y---NARASVSPDGKKIAMVHG----SGG------QYRIAVMDLSTGS------VRT 374 (433)
T ss_pred eEEEEECCCCCeEEeecCCC---C---ccCEEECCCCCEEEEEEC----CCC------ceeEEEEECCCCC------eEE
Confidence 79999999998888874321 1 347999999999997654 334 4589999998887 788
Q ss_pred ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEec
Q psy463 352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFST 422 (790)
Q Consensus 352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~ 422 (790)
|+.+... . .+.|+|||+.|+|.+..+. ...||.+++++ +..+.|+. ..+....++|||
T Consensus 375 Lt~~~~~-~-~p~~spdG~~i~~~s~~~g--~~~L~~~~~~g--~~~~~l~~-------~~g~~~~p~wsp 432 (433)
T PRK04922 375 LTPGSLD-E-SPSFAPNGSMVLYATREGG--RGVLAAVSTDG--RVRQRLVS-------ADGEVREPAWSP 432 (433)
T ss_pred CCCCCCC-C-CceECCCCCEEEEEEecCC--ceEEEEEECCC--CceEEccc-------CCCCCCCCccCC
Confidence 8876532 2 3799999999999988732 27899999977 55566654 233455677776
No 20
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.85 E-value=1.2e-19 Score=186.39 Aligned_cols=291 Identities=19% Similarity=0.185 Sum_probs=221.0
Q ss_pred EEecCCcEEEEEeecCC-CCeEEEEecCCCeEEEeccchhHHHhhccCC--CCceEEEEEEcCCCcEEEEEEEeCCCCCC
Q psy463 419 TFSTNVSYYVLSCIGPG-IPEIMLFDKTGQRLLYWDTNEDLRTALTNIT--LPSVEYMSVPIQPNMEAQVKLFLPPGIDT 495 (790)
Q Consensus 419 ~~s~dg~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~dg~~i~~~~~~P~~~~~ 495 (790)
.-+.+|+-+.+...+-. |+.+++.++.+.++..+...+ ..++ .-.++....++.||++|+++++. ++.+
T Consensus 346 ~~~~~g~ev~l~~t~F~tP~~~~r~~~~~~eLe~ik~~p------~~FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~~- 417 (648)
T COG1505 346 SADKDGDEVFLAFTSFTTPSTLYRLDLFGGELEVIREQP------VQFDADNYEVEQFFATSKDGTRIPYFIVR-KGAK- 417 (648)
T ss_pred cCCCCCcEEEEEeecccCCCceEEEecCCceehhhhhcc------CCcCccCceEEEEEEEcCCCccccEEEEe-cCCc-
Confidence 44556777777777766 889999999988777665433 2222 23467777889999999999998 6654
Q ss_pred CCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHH
Q psy463 496 SGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQ 575 (790)
Q Consensus 496 ~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~ 575 (790)
.. +.|++|+.|||-.... ...|+... ...+. +|.+.+..|.||.|.+|..|+.+..+...+..++|..++.+.|+
T Consensus 418 -~d-~~pTll~aYGGF~vsl-tP~fs~~~-~~WLe-rGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi 492 (648)
T COG1505 418 -KD-ENPTLLYAYGGFNISL-TPRFSGSR-KLWLE-RGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLI 492 (648)
T ss_pred -CC-CCceEEEecccccccc-CCccchhh-HHHHh-cCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHH
Confidence 34 7899999999877643 66676654 44454 89999999999999999999999888877888999999999999
Q ss_pred HhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc-----chhhhcCCCCccCchhhhhhcc
Q psy463 576 ENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI-----YSERYMGLPTFEDNLEGYKIAA 650 (790)
Q Consensus 576 ~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~ 650 (790)
+ .++..+++++|.|.|-||.++..++.++|+ .|.++++..|+.|+..|... |...| |.|. ++...
T Consensus 493 ~-rgitspe~lgi~GgSNGGLLvg~alTQrPe-lfgA~v~evPllDMlRYh~l~aG~sW~~EY-G~Pd---~P~d~---- 562 (648)
T COG1505 493 K-RGITSPEKLGIQGGSNGGLLVGAALTQRPE-LFGAAVCEVPLLDMLRYHLLTAGSSWIAEY-GNPD---DPEDR---- 562 (648)
T ss_pred H-hCCCCHHHhhhccCCCCceEEEeeeccChh-hhCceeeccchhhhhhhcccccchhhHhhc-CCCC---CHHHH----
Confidence 8 888899999999999999999999999996 99999999999999877432 22222 3331 11100
Q ss_pred ccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhc-cCCccEE
Q psy463 651 LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDR-IRDKQYL 729 (790)
Q Consensus 651 ~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~P~L 729 (790)
..| .+.||+.+++. .+-.|+|
T Consensus 563 ---------------------------------~~l-------------------------~~YSPy~nl~~g~kYP~~L 584 (648)
T COG1505 563 ---------------------------------AFL-------------------------LAYSPYHNLKPGQKYPPTL 584 (648)
T ss_pred ---------------------------------HHH-------------------------HhcCchhcCCccccCCCeE
Confidence 011 11222233332 2248999
Q ss_pred EEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cc--hHHHHHHHHHHHHhhC
Q psy463 730 LVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VR--PHFYHTLERFLDSCFA 790 (790)
Q Consensus 730 ii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~--~~~~~~i~~fl~~~l~ 790 (790)
|-.+++|.+|+|.++..++.+|++.+.++-+.+--++||+-.. .. -.....+..||.+.|+
T Consensus 585 ITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 585 ITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTLG 648 (648)
T ss_pred EEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999988877777789998876 22 2344667788887764
No 21
>PRK13604 luxD acyl transferase; Provisional
Probab=99.84 E-value=1.5e-19 Score=178.05 Aligned_cols=235 Identities=12% Similarity=0.050 Sum_probs=150.0
Q ss_pred EEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCC-CCChhhh
Q psy463 473 MSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNS-ALKGNTL 551 (790)
Q Consensus 473 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~-~~~g~~~ 551 (790)
..+.+.||.++.||+..|.+. ...+.++||+.||..+.. .. ...++ ..++++||+|+.+|+||+ |.++.++
T Consensus 12 ~~~~~~dG~~L~Gwl~~P~~~---~~~~~~~vIi~HGf~~~~---~~-~~~~A-~~La~~G~~vLrfD~rg~~GeS~G~~ 83 (307)
T PRK13604 12 HVICLENGQSIRVWETLPKEN---SPKKNNTILIASGFARRM---DH-FAGLA-EYLSSNGFHVIRYDSLHHVGLSSGTI 83 (307)
T ss_pred heEEcCCCCEEEEEEEcCccc---CCCCCCEEEEeCCCCCCh---HH-HHHHH-HHHHHCCCEEEEecCCCCCCCCCCcc
Confidence 456777999999999999742 245678999999988753 11 22333 445569999999999886 6665554
Q ss_pred HhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchh
Q psy463 552 KYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSE 631 (790)
Q Consensus 552 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~ 631 (790)
..... .....|+.++++|+.+ .. ..+|+|+||||||.++..+|.. + .++++|+.+|..++..+...
T Consensus 84 ~~~t~----s~g~~Dl~aaid~lk~-~~---~~~I~LiG~SmGgava~~~A~~-~--~v~~lI~~sp~~~l~d~l~~--- 149 (307)
T PRK13604 84 DEFTM----SIGKNSLLTVVDWLNT-RG---INNLGLIAASLSARIAYEVINE-I--DLSFLITAVGVVNLRDTLER--- 149 (307)
T ss_pred ccCcc----cccHHHHHHHHHHHHh-cC---CCceEEEEECHHHHHHHHHhcC-C--CCCEEEEcCCcccHHHHHHH---
Confidence 32211 1237899999999987 32 4689999999999998777663 2 48889999999885422110
Q ss_pred hhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhh
Q psy463 632 RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGY 711 (790)
Q Consensus 632 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (790)
.+.. .|... |..-.....|..-..-....+++.+...++ .
T Consensus 150 -~~~~--------~~~~~------------p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~-------------------~ 189 (307)
T PRK13604 150 -ALGY--------DYLSL------------PIDELPEDLDFEGHNLGSEVFVTDCFKHGW-------------------D 189 (307)
T ss_pred -hhhc--------ccccC------------cccccccccccccccccHHHHHHHHHhcCc-------------------c
Confidence 0000 00000 000000000000000000111111111111 1
Q ss_pred hhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463 712 KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG 772 (790)
Q Consensus 712 ~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~ 772 (790)
...++.+.++++ +.|+|+|||+.|..||+++++.++++++.. +++++++||++|.+..
T Consensus 190 ~~~s~i~~~~~l-~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~--~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 190 TLDSTINKMKGL-DIPFIAFTANNDSWVKQSEVIDLLDSIRSE--QCKLYSLIGSSHDLGE 247 (307)
T ss_pred ccccHHHHHhhc-CCCEEEEEcCCCCccCHHHHHHHHHHhccC--CcEEEEeCCCccccCc
Confidence 123344678888 899999999999999999999999987643 4699999999999985
No 22
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.84 E-value=7.8e-19 Score=191.06 Aligned_cols=253 Identities=13% Similarity=0.137 Sum_probs=178.9
Q ss_pred CCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCC
Q psy463 119 DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGST 198 (790)
Q Consensus 119 dg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (790)
-.++|+|+........+.| +||+.|.+++. .++++.+...+ .-..|+|+++. ++|.+...
T Consensus 161 f~~~ia~v~~~~~~~~~~~------~l~~~d~~g~~------~~~l~~~~~~~-~~p~wSpDG~~-la~~s~~~------ 220 (430)
T PRK00178 161 FSTRILYVTAERFSVNTRY------TLQRSDYDGAR------AVTLLQSREPI-LSPRWSPDGKR-IAYVSFEQ------ 220 (430)
T ss_pred ceeeEEEEEeeCCCCCcce------EEEEECCCCCC------ceEEecCCCce-eeeeECCCCCE-EEEEEcCC------
Confidence 3467888876544333444 89999998764 56666654433 33478888765 77776431
Q ss_pred CccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEEC
Q psy463 199 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSI 278 (790)
Q Consensus 199 ~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~ 278 (790)
...+||++++++|+ .++++ ...+....+.|||||+.++++....+..+||++|+
T Consensus 221 ---~~~~l~~~~l~~g~------~~~l~-----------------~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~ 274 (430)
T PRK00178 221 ---KRPRIFVQNLDTGR------REQIT-----------------NFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDL 274 (430)
T ss_pred ---CCCEEEEEECCCCC------EEEcc-----------------CCCCCcCCeEECCCCCEEEEEEccCCCceEEEEEC
Confidence 12689999999887 34444 33344457999999996555443334567999999
Q ss_pred CCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeE
Q psy463 279 NEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT 358 (790)
Q Consensus 279 ~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~ 358 (790)
++++.++|+.... ....+.|||||+.|+|.. ++.| ..+||++++.+++ .++++....
T Consensus 275 ~~~~~~~lt~~~~------~~~~~~~spDg~~i~f~s----~~~g------~~~iy~~d~~~g~------~~~lt~~~~- 331 (430)
T PRK00178 275 ASRQLSRVTNHPA------IDTEPFWGKDGRTLYFTS----DRGG------KPQIYKVNVNGGR------AERVTFVGN- 331 (430)
T ss_pred CCCCeEEcccCCC------CcCCeEECCCCCEEEEEE----CCCC------CceEEEEECCCCC------EEEeecCCC-
Confidence 9998888775332 245799999999999654 3566 5689999998887 777764321
Q ss_pred EeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCe
Q psy463 359 VTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPE 438 (790)
Q Consensus 359 ~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~ 438 (790)
....+.|+|||+.|+|.+.... ..+|+.+++++ ++.+.|+.. .....++|||||++++|+....+...
T Consensus 332 ~~~~~~~Spdg~~i~~~~~~~~--~~~l~~~dl~t--g~~~~lt~~--------~~~~~p~~spdg~~i~~~~~~~g~~~ 399 (430)
T PRK00178 332 YNARPRLSADGKTLVMVHRQDG--NFHVAAQDLQR--GSVRILTDT--------SLDESPSVAPNGTMLIYATRQQGRGV 399 (430)
T ss_pred CccceEECCCCCEEEEEEccCC--ceEEEEEECCC--CCEEEccCC--------CCCCCceECCCCCEEEEEEecCCceE
Confidence 1223789999999999987632 26899999987 677777752 12235799999999999987666778
Q ss_pred EEEEecCCCeEEEe
Q psy463 439 IMLFDKTGQRLLYW 452 (790)
Q Consensus 439 i~~~~~~~~~~~~l 452 (790)
|++++++++..+.+
T Consensus 400 l~~~~~~g~~~~~l 413 (430)
T PRK00178 400 LMLVSINGRVRLPL 413 (430)
T ss_pred EEEEECCCCceEEC
Confidence 99999887655544
No 23
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.84 E-value=5.7e-19 Score=191.21 Aligned_cols=252 Identities=10% Similarity=0.079 Sum_probs=177.3
Q ss_pred ceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCc
Q psy463 121 KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPV 200 (790)
Q Consensus 121 ~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (790)
.+|+|+.......... .+||++|.++.. ..+||.+...+. -..|+|+++. ++|.+....
T Consensus 168 ~~ia~v~~~~~~~~~~------~~l~i~D~~g~~------~~~lt~~~~~v~-~p~wSpDg~~-la~~s~~~~------- 226 (433)
T PRK04922 168 TRIAYVTVSGAGGAMR------YALQVADSDGYN------PQTILRSAEPIL-SPAWSPDGKK-LAYVSFERG------- 226 (433)
T ss_pred ceEEEEEEeCCCCCce------EEEEEECCCCCC------ceEeecCCCccc-cccCCCCCCE-EEEEecCCC-------
Confidence 5788887543322222 379999987653 567877754433 3578887765 777654211
Q ss_pred cccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCC
Q psy463 201 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINE 280 (790)
Q Consensus 201 ~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~ 280 (790)
..+||++++++|+ ..+++ ...+....+.|||||+.++++....+..+||++++++
T Consensus 227 --~~~l~~~dl~~g~------~~~l~-----------------~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~ 281 (433)
T PRK04922 227 --RSAIYVQDLATGQ------RELVA-----------------SFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGS 281 (433)
T ss_pred --CcEEEEEECCCCC------EEEec-----------------cCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCC
Confidence 2689999999886 34444 3334445789999999555443333456799999999
Q ss_pred CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEe
Q psy463 281 GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT 360 (790)
Q Consensus 281 g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~ 360 (790)
++.++++.... ....+.|||||++|+|.. ++.| ..+||++++++++ .++|+.......
T Consensus 282 g~~~~lt~~~~------~~~~~~~spDG~~l~f~s----d~~g------~~~iy~~dl~~g~------~~~lt~~g~~~~ 339 (433)
T PRK04922 282 RQLTRLTNHFG------IDTEPTWAPDGKSIYFTS----DRGG------RPQIYRVAASGGS------AERLTFQGNYNA 339 (433)
T ss_pred CCeEECccCCC------CccceEECCCCCEEEEEE----CCCC------CceEEEEECCCCC------eEEeecCCCCcc
Confidence 99888775421 134799999999999654 3566 5689999998887 777775432222
Q ss_pred EEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEE
Q psy463 361 EILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIM 440 (790)
Q Consensus 361 ~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~ 440 (790)
.++|||||+.|+|.+..+. ..+|+.+++.+ ++.+.|+.. . ....+.|||||++++|.....+...|+
T Consensus 340 -~~~~SpDG~~Ia~~~~~~~--~~~I~v~d~~~--g~~~~Lt~~-------~-~~~~p~~spdG~~i~~~s~~~g~~~L~ 406 (433)
T PRK04922 340 -RASVSPDGKKIAMVHGSGG--QYRIAVMDLST--GSVRTLTPG-------S-LDESPSFAPNGSMVLYATREGGRGVLA 406 (433)
T ss_pred -CEEECCCCCEEEEEECCCC--ceeEEEEECCC--CCeEECCCC-------C-CCCCceECCCCCEEEEEEecCCceEEE
Confidence 3899999999999876532 26899999977 666777752 1 234589999999999998876677899
Q ss_pred EEecCCCeEEEec
Q psy463 441 LFDKTGQRLLYWD 453 (790)
Q Consensus 441 ~~~~~~~~~~~l~ 453 (790)
+++++++..+.+.
T Consensus 407 ~~~~~g~~~~~l~ 419 (433)
T PRK04922 407 AVSTDGRVRQRLV 419 (433)
T ss_pred EEECCCCceEEcc
Confidence 9999887666554
No 24
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.84 E-value=6.1e-19 Score=191.87 Aligned_cols=226 Identities=15% Similarity=0.180 Sum_probs=157.1
Q ss_pred CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463 112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN 191 (790)
Q Consensus 112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (790)
..|+|||||++|+|.+.... ..+||++++++++ ..+++..+... .-..|+|+++. ++|....
T Consensus 202 ~~p~wSpDG~~la~~s~~~~----------~~~l~~~~l~~g~------~~~l~~~~g~~-~~~~~SpDG~~-la~~~~~ 263 (430)
T PRK00178 202 LSPRWSPDGKRIAYVSFEQK----------RPRIFVQNLDTGR------REQITNFEGLN-GAPAWSPDGSK-LAFVLSK 263 (430)
T ss_pred eeeeECCCCCEEEEEEcCCC----------CCEEEEEECCCCC------EEEccCCCCCc-CCeEECCCCCE-EEEEEcc
Confidence 35799999999999875432 2389999998874 44555443222 23578887764 5554432
Q ss_pred cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcce
Q psy463 192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRA 271 (790)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~ 271 (790)
.+ ..+||++|+++++ ..+++ ........+.|||||+.++++....+..
T Consensus 264 ~g---------~~~Iy~~d~~~~~------~~~lt-----------------~~~~~~~~~~~spDg~~i~f~s~~~g~~ 311 (430)
T PRK00178 264 DG---------NPEIYVMDLASRQ------LSRVT-----------------NHPAIDTEPFWGKDGRTLYFTSDRGGKP 311 (430)
T ss_pred CC---------CceEEEEECCCCC------eEEcc-----------------cCCCCcCCeEECCCCCEEEEEECCCCCc
Confidence 11 2689999999886 44555 3334456789999999555554444456
Q ss_pred EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463 272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP 351 (790)
Q Consensus 272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 351 (790)
+||++++.+|+.++++.... ....+.|||||+.|+|... ..+ ..+|+++|+++++ .+.
T Consensus 312 ~iy~~d~~~g~~~~lt~~~~------~~~~~~~Spdg~~i~~~~~----~~~------~~~l~~~dl~tg~------~~~ 369 (430)
T PRK00178 312 QIYKVNVNGGRAERVTFVGN------YNARPRLSADGKTLVMVHR----QDG------NFHVAAQDLQRGS------VRI 369 (430)
T ss_pred eEEEEECCCCCEEEeecCCC------CccceEECCCCCEEEEEEc----cCC------ceEEEEEECCCCC------EEE
Confidence 79999999998888764321 1346899999999997654 344 4579999999887 888
Q ss_pred ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEec
Q psy463 352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFST 422 (790)
Q Consensus 352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~ 422 (790)
|+...... .+.|+|||+.|+|.+..+. ...||.+++++ +..+.++. ..+....++|||
T Consensus 370 lt~~~~~~--~p~~spdg~~i~~~~~~~g--~~~l~~~~~~g--~~~~~l~~-------~~g~~~~p~ws~ 427 (430)
T PRK00178 370 LTDTSLDE--SPSVAPNGTMLIYATRQQG--RGVLMLVSING--RVRLPLPT-------AQGEVREPSWSP 427 (430)
T ss_pred ccCCCCCC--CceECCCCCEEEEEEecCC--ceEEEEEECCC--CceEECcC-------CCCCcCCCccCC
Confidence 88754332 3799999999999988732 27899999976 44445543 234456677776
No 25
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.83 E-value=1.1e-18 Score=188.53 Aligned_cols=251 Identities=12% Similarity=0.090 Sum_probs=176.1
Q ss_pred ceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCc
Q psy463 121 KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPV 200 (790)
Q Consensus 121 ~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (790)
.+|+|+...... .. ..+||++|.++.. .++++.+...+. -..|+|+++. ++|.+...
T Consensus 183 ~riayv~~~~~~-~~------~~~l~i~d~dG~~------~~~l~~~~~~~~-~p~wSPDG~~-La~~s~~~-------- 239 (448)
T PRK04792 183 TRIAYVVVNDKD-KY------PYQLMIADYDGYN------EQMLLRSPEPLM-SPAWSPDGRK-LAYVSFEN-------- 239 (448)
T ss_pred CEEEEEEeeCCC-CC------ceEEEEEeCCCCC------ceEeecCCCccc-CceECCCCCE-EEEEEecC--------
Confidence 577887654321 11 2389999987763 456777654333 3478888765 66765421
Q ss_pred cccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCC
Q psy463 201 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINE 280 (790)
Q Consensus 201 ~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~ 280 (790)
...+||++|+.+++ +.+++ ........+.|||||+.++++....+..+||++++++
T Consensus 240 -g~~~L~~~dl~tg~------~~~lt-----------------~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~t 295 (448)
T PRK04792 240 -RKAEIFVQDIYTQV------REKVT-----------------SFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIAT 295 (448)
T ss_pred -CCcEEEEEECCCCC------eEEec-----------------CCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCC
Confidence 12689999999886 44444 3333445789999999655554444557899999999
Q ss_pred CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEe
Q psy463 281 GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT 360 (790)
Q Consensus 281 g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~ 360 (790)
++.++++.... ....+.|||||++|+|... ..| ..+||++|+++++ .+.||.......
T Consensus 296 g~~~~lt~~~~------~~~~p~wSpDG~~I~f~s~----~~g------~~~Iy~~dl~~g~------~~~Lt~~g~~~~ 353 (448)
T PRK04792 296 KALTRITRHRA------IDTEPSWHPDGKSLIFTSE----RGG------KPQIYRVNLASGK------VSRLTFEGEQNL 353 (448)
T ss_pred CCeEECccCCC------CccceEECCCCCEEEEEEC----CCC------CceEEEEECCCCC------EEEEecCCCCCc
Confidence 98888775421 1457999999999996543 556 5689999999887 777774322222
Q ss_pred EEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEE
Q psy463 361 EILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIM 440 (790)
Q Consensus 361 ~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~ 440 (790)
. +.|+|||+.|+|.+.... ..+||.+++++ ++.+.|+.. .....++|||||++++|+....+...++
T Consensus 354 ~-~~~SpDG~~l~~~~~~~g--~~~I~~~dl~~--g~~~~lt~~--------~~d~~ps~spdG~~I~~~~~~~g~~~l~ 420 (448)
T PRK04792 354 G-GSITPDGRSMIMVNRTNG--KFNIARQDLET--GAMQVLTST--------RLDESPSVAPNGTMVIYSTTYQGKQVLA 420 (448)
T ss_pred C-eeECCCCCEEEEEEecCC--ceEEEEEECCC--CCeEEccCC--------CCCCCceECCCCCEEEEEEecCCceEEE
Confidence 2 789999999999876632 26899999987 666777652 1223578999999999988766667799
Q ss_pred EEecCCCeEEEec
Q psy463 441 LFDKTGQRLLYWD 453 (790)
Q Consensus 441 ~~~~~~~~~~~l~ 453 (790)
+++.+++..+.+.
T Consensus 421 ~~~~~G~~~~~l~ 433 (448)
T PRK04792 421 AVSIDGRFKARLP 433 (448)
T ss_pred EEECCCCceEECc
Confidence 9998876666553
No 26
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.83 E-value=5.5e-19 Score=185.35 Aligned_cols=276 Identities=16% Similarity=0.170 Sum_probs=160.9
Q ss_pred EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463 471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT 550 (790)
Q Consensus 471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~ 550 (790)
+...+...||.++++..+.|.+ .....++||++||.+... .|........++++||.|+++|+||+|.+...
T Consensus 33 ~~~~~~~~dg~~l~~~~~~~~~----~~~~~~~VvllHG~~~~~----~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~ 104 (330)
T PLN02298 33 SKSFFTSPRGLSLFTRSWLPSS----SSPPRALIFMVHGYGNDI----SWTFQSTAIFLAQMGFACFALDLEGHGRSEGL 104 (330)
T ss_pred ccceEEcCCCCEEEEEEEecCC----CCCCceEEEEEcCCCCCc----ceehhHHHHHHHhCCCEEEEecCCCCCCCCCc
Confidence 4556777899999999998864 223568999999986542 23322233345558999999999998865421
Q ss_pred hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc-ccc
Q psy463 551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD-TIY 629 (790)
Q Consensus 551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~-~~~ 629 (790)
. .....-...++|+.++++++.. ....+..+++|+||||||.+++.++.++|. .++++|+.+|........ ..+
T Consensus 105 ~---~~~~~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~ 179 (330)
T PLN02298 105 R---AYVPNVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHLANPE-GFDGAVLVAPMCKISDKIRPPW 179 (330)
T ss_pred c---ccCCCHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHhcCcc-cceeEEEecccccCCcccCCch
Confidence 1 0000111246778888888875 222344589999999999999999998885 899999998875432100 000
Q ss_pred hhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCC---CccChhhHHHHHHHHHhcCcchhcccccCCCCcCC
Q psy463 630 SERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMD---DNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFED 706 (790)
Q Consensus 630 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d---~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 706 (790)
. ... ....+.... |.+......+ ..+..... ..+...+.. .|...+....
T Consensus 180 ~------------~~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~~~~~~~ 232 (330)
T PLN02298 180 P------------IPQ-----ILTFVARFL--PTLAIVPTADLLEKSVKVPAK----KIIAKRNPM----RYNGKPRLGT 232 (330)
T ss_pred H------------HHH-----HHHHHHHHC--CCCccccCCCcccccccCHHH----HHHHHhCcc----ccCCCccHHH
Confidence 0 000 000000000 0000000000 00000000 001111110 1111110000
Q ss_pred cchhhhh-hhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-c----chHHHHH
Q psy463 707 NLEGYKI-AALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-V----RPHFYHT 780 (790)
Q Consensus 707 ~~~~~~~-~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~----~~~~~~~ 780 (790)
.....+. ......+.++ ++|+||+||++|.++|++.++.+++.+...+ ++++++++++|.+.. . .+.+.+.
T Consensus 233 ~~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~--~~l~~~~~a~H~~~~e~pd~~~~~~~~~ 309 (330)
T PLN02298 233 VVELLRVTDYLGKKLKDV-SIPFIVLHGSADVVTDPDVSRALYEEAKSED--KTIKIYDGMMHSLLFGEPDENIEIVRRD 309 (330)
T ss_pred HHHHHHHHHHHHHhhhhc-CCCEEEEecCCCCCCCHHHHHHHHHHhccCC--ceEEEcCCcEeeeecCCCHHHHHHHHHH
Confidence 0000010 0122456788 9999999999999999999999998876433 488899999999864 2 3568889
Q ss_pred HHHHHHHhh
Q psy463 781 LERFLDSCF 789 (790)
Q Consensus 781 i~~fl~~~l 789 (790)
+.+||.+++
T Consensus 310 i~~fl~~~~ 318 (330)
T PLN02298 310 ILSWLNERC 318 (330)
T ss_pred HHHHHHHhc
Confidence 999998875
No 27
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.82 E-value=2.7e-18 Score=185.24 Aligned_cols=251 Identities=14% Similarity=0.127 Sum_probs=175.5
Q ss_pred cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463 114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE 193 (790)
Q Consensus 114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (790)
..|+ .+|+|.+.... ..+||++|.++.. ..+++.+...+. -..|+|+++. ++|.+...
T Consensus 160 g~f~---~~iayv~~~~~----------~~~L~~~D~dG~~------~~~l~~~~~~v~-~p~wSPDG~~-la~~s~~~- 217 (427)
T PRK02889 160 GVFS---TRIAYVIKTGN----------RYQLQISDADGQN------AQSALSSPEPII-SPAWSPDGTK-LAYVSFES- 217 (427)
T ss_pred cccc---cEEEEEEccCC----------ccEEEEECCCCCC------ceEeccCCCCcc-cceEcCCCCE-EEEEEccC-
Confidence 3565 56888874221 2389999986653 456665544443 3578887765 77766421
Q ss_pred CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEE
Q psy463 194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARI 273 (790)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i 273 (790)
...+||++|+.+|+ ...++ ...+....+.|||||+.++++....+..+|
T Consensus 218 --------~~~~I~~~dl~~g~------~~~l~-----------------~~~g~~~~~~~SPDG~~la~~~~~~g~~~I 266 (427)
T PRK02889 218 --------KKPVVYVHDLATGR------RRVVA-----------------NFKGSNSAPAWSPDGRTLAVALSRDGNSQI 266 (427)
T ss_pred --------CCcEEEEEECCCCC------EEEee-----------------cCCCCccceEECCCCCEEEEEEccCCCceE
Confidence 12689999999886 33444 334445689999999965554333445789
Q ss_pred EEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc
Q psy463 274 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT 353 (790)
Q Consensus 274 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt 353 (790)
|.+++.++..++++.... ....+.|||||++|+|. + ++.| ..+||.+++++++ .++++
T Consensus 267 y~~d~~~~~~~~lt~~~~------~~~~~~wSpDG~~l~f~-s---~~~g------~~~Iy~~~~~~g~------~~~lt 324 (427)
T PRK02889 267 YTVNADGSGLRRLTQSSG------IDTEPFFSPDGRSIYFT-S---DRGG------APQIYRMPASGGA------AQRVT 324 (427)
T ss_pred EEEECCCCCcEECCCCCC------CCcCeEEcCCCCEEEEE-e---cCCC------CcEEEEEECCCCc------eEEEe
Confidence 999999888877765321 13479999999999965 4 3556 5689999998876 66776
Q ss_pred CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeec
Q psy463 354 RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIG 433 (790)
Q Consensus 354 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~ 433 (790)
....... .+.|||||++|+|.+..+. ..+|+++++.+ ++.+.++.. .....++|||||+.|+|....
T Consensus 325 ~~g~~~~-~~~~SpDG~~Ia~~s~~~g--~~~I~v~d~~~--g~~~~lt~~--------~~~~~p~~spdg~~l~~~~~~ 391 (427)
T PRK02889 325 FTGSYNT-SPRISPDGKLLAYISRVGG--AFKLYVQDLAT--GQVTALTDT--------TRDESPSFAPNGRYILYATQQ 391 (427)
T ss_pred cCCCCcC-ceEECCCCCEEEEEEccCC--cEEEEEEECCC--CCeEEccCC--------CCccCceECCCCCEEEEEEec
Confidence 4322122 3789999999999887633 26899999987 666666642 233568999999999999887
Q ss_pred CCCCeEEEEecCCCeEEEe
Q psy463 434 PGIPEIMLFDKTGQRLLYW 452 (790)
Q Consensus 434 ~~~~~i~~~~~~~~~~~~l 452 (790)
.+...+++++++++..+.+
T Consensus 392 ~g~~~l~~~~~~g~~~~~l 410 (427)
T PRK02889 392 GGRSVLAAVSSDGRIKQRL 410 (427)
T ss_pred CCCEEEEEEECCCCceEEe
Confidence 7777899998877655444
No 28
>PRK10566 esterase; Provisional
Probab=99.81 E-value=1.1e-18 Score=175.33 Aligned_cols=233 Identities=16% Similarity=0.181 Sum_probs=142.6
Q ss_pred EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc---cC
Q psy463 483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR---RL 559 (790)
Q Consensus 483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~---~~ 559 (790)
+....+.|.+. ..++.|+||++||.++.. ..| .+....++++||.|+++|+||+|............ ..
T Consensus 12 ~~~~~~~p~~~---~~~~~p~vv~~HG~~~~~---~~~--~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~ 83 (249)
T PRK10566 12 IEVLHAFPAGQ---RDTPLPTVFFYHGFTSSK---LVY--SYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQI 83 (249)
T ss_pred cceEEEcCCCC---CCCCCCEEEEeCCCCccc---chH--HHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHH
Confidence 34456667631 235679999999987763 222 23445555689999999999976421100000000 00
Q ss_pred CccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCc
Q psy463 560 GTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTF 639 (790)
Q Consensus 560 ~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~ 639 (790)
....++|+.++++++.+ .+.+|.+||+++|||+||.+++.++.++|. +++.+...+...... ..... .+
T Consensus 84 ~~~~~~~~~~~~~~l~~-~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~--~~-- 152 (249)
T PRK10566 84 LLQNMQEFPTLRAAIRE-EGWLLDDRLAVGGASMGGMTALGIMARHPW--VKCVASLMGSGYFTS----LARTL--FP-- 152 (249)
T ss_pred HHHHHHHHHHHHHHHHh-cCCcCccceeEEeecccHHHHHHHHHhCCC--eeEEEEeeCcHHHHH----HHHHh--cc--
Confidence 11235777788888887 666889999999999999999999987763 344333322111000 00000 00
Q ss_pred cCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhh
Q psy463 640 EDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNK 719 (790)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (790)
+. .. . ... ...........+... ++...
T Consensus 153 ----------------------~~-~~-~--~~~-~~~~~~~~~~~~~~~-------------------------~~~~~ 180 (249)
T PRK10566 153 ----------------------PL-IP-E--TAA-QQAEFNNIVAPLAEW-------------------------EVTHQ 180 (249)
T ss_pred ----------------------cc-cc-c--ccc-cHHHHHHHHHHHhhc-------------------------Chhhh
Confidence 00 00 0 000 000000011111111 11134
Q ss_pred hhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCc--eEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463 720 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM--FQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF 789 (790)
Q Consensus 720 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~--~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l 789 (790)
+.++..+|+|++||++|.++|++++..++++++.+|.+ ++++++++++|.+. ...+..+.+||+++|
T Consensus 181 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 181 LEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---PEALDAGVAFFRQHL 249 (249)
T ss_pred hhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---HHHHHHHHHHHHhhC
Confidence 45542589999999999999999999999999998874 78899999999874 467899999999886
No 29
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.81 E-value=2.2e-18 Score=181.71 Aligned_cols=274 Identities=15% Similarity=0.143 Sum_probs=154.1
Q ss_pred EEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463 474 SVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKY 553 (790)
Q Consensus 474 ~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~ 553 (790)
.+...+|.++.+..+.|.+ ....|+||++||.++.. ..|-..+ ...+++.||.|+++|+||+|.+......
T Consensus 65 ~~~~~~g~~l~~~~~~p~~-----~~~~~~iv~lHG~~~~~---~~~~~~~-~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 135 (349)
T PLN02385 65 YEVNSRGVEIFSKSWLPEN-----SRPKAAVCFCHGYGDTC---TFFFEGI-ARKIASSGYGVFAMDYPGFGLSEGLHGY 135 (349)
T ss_pred eEEcCCCCEEEEEEEecCC-----CCCCeEEEEECCCCCcc---chHHHHH-HHHHHhCCCEEEEecCCCCCCCCCCCCC
Confidence 4445689999999999863 34568999999987652 1111112 2334457999999999998765421000
Q ss_pred hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc--ccchh
Q psy463 554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD--TIYSE 631 (790)
Q Consensus 554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~--~~~~~ 631 (790)
...+ ...++|+.+.++.+.. ....+..+++|+||||||.+++.++.++|. .++++|+.+|+....... .....
T Consensus 136 --~~~~-~~~~~dv~~~l~~l~~-~~~~~~~~~~LvGhSmGG~val~~a~~~p~-~v~glVLi~p~~~~~~~~~~~~~~~ 210 (349)
T PLN02385 136 --IPSF-DDLVDDVIEHYSKIKG-NPEFRGLPSFLFGQSMGGAVALKVHLKQPN-AWDGAILVAPMCKIADDVVPPPLVL 210 (349)
T ss_pred --cCCH-HHHHHHHHHHHHHHHh-ccccCCCCEEEEEeccchHHHHHHHHhCcc-hhhheeEecccccccccccCchHHH
Confidence 0000 1235566666666544 222345689999999999999999998885 889999988865422100 00000
Q ss_pred hhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCC-ccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchh
Q psy463 632 RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDD-NVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG 710 (790)
Q Consensus 632 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~-~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 710 (790)
.. . ..+..+.... .+.. ..+. ........ ...+..... ..+...+........
T Consensus 211 ~~------------~------~~~~~~~p~~-~~~~-~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~ 264 (349)
T PLN02385 211 QI------------L------ILLANLLPKA-KLVP-QKDLAELAFRDLK--KRKMAEYNV----IAYKDKPRLRTAVEL 264 (349)
T ss_pred HH------------H------HHHHHHCCCc-eecC-CCccccccccCHH--HHHHhhcCc----ceeCCCcchHHHHHH
Confidence 00 0 0000000000 0000 0000 00000000 000000000 000000000000111
Q ss_pred hhh-hhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cch----HHHHHHHHH
Q psy463 711 YKI-AALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRP----HFYHTLERF 784 (790)
Q Consensus 711 ~~~-~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~----~~~~~i~~f 784 (790)
++. ......+.++ ++|+|++||++|.++|+..++.+++.+... .++++++|+++|.+.. .++ +++..+.+|
T Consensus 265 l~~~~~~~~~l~~i-~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~--~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~w 341 (349)
T PLN02385 265 LRTTQEIEMQLEEV-SLPLLILHGEADKVTDPSVSKFLYEKASSS--DKKLKLYEDAYHSILEGEPDEMIFQVLDDIISW 341 (349)
T ss_pred HHHHHHHHHhcccC-CCCEEEEEeCCCCccChHHHHHHHHHcCCC--CceEEEeCCCeeecccCCChhhHHHHHHHHHHH
Confidence 111 1223456788 999999999999999999999999887543 3488899999999885 444 488999999
Q ss_pred HHHhhC
Q psy463 785 LDSCFA 790 (790)
Q Consensus 785 l~~~l~ 790 (790)
|+++++
T Consensus 342 L~~~~~ 347 (349)
T PLN02385 342 LDSHST 347 (349)
T ss_pred HHHhcc
Confidence 998763
No 30
>PLN02442 S-formylglutathione hydrolase
Probab=99.80 E-value=3.1e-18 Score=173.57 Aligned_cols=245 Identities=18% Similarity=0.253 Sum_probs=149.7
Q ss_pred eEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcCCeEEEEEcCCCCCC-
Q psy463 470 VEYMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNKDIVVAYIDGRNSAL- 546 (790)
Q Consensus 470 ~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~G~~v~~~d~rG~~~- 546 (790)
.....+.++ -|..+.+.+|+|+. . ..+++|+|+++||.++.. ..|.. .-...+++..|++|++||..+++.
T Consensus 18 ~~~~~~~s~~l~~~~~~~vy~P~~-~--~~~~~Pvv~~lHG~~~~~---~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~ 91 (283)
T PLN02442 18 NRRYKHFSSTLGCSMTFSVYFPPA-S--DSGKVPVLYWLSGLTCTD---ENFIQKSGAQRAAAARGIALVAPDTSPRGLN 91 (283)
T ss_pred EEEEEEeccccCCceEEEEEcCCc-c--cCCCCCEEEEecCCCcCh---HHHHHhhhHHHHHhhcCeEEEecCCCCCCCC
Confidence 344455553 46789999999984 2 457899999999987763 23321 112355666899999999764431
Q ss_pred -Chh----------h-hHhhhhccCCccchhH-HH-HHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEE
Q psy463 547 -KGN----------T-LKYAGYRRLGTVEIYD-QI-NVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKC 612 (790)
Q Consensus 547 -~g~----------~-~~~~~~~~~~~~~~~D-~~-~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~ 612 (790)
.+. . +.......++...+.+ +. +...++.+.+..+|.++++|+|+||||++++.++.++|+ .|++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~-~~~~ 170 (283)
T PLN02442 92 VEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPD-KYKS 170 (283)
T ss_pred CCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCch-hEEE
Confidence 010 0 0001111111111111 11 222233332334688999999999999999999999885 8999
Q ss_pred EEEeCCCCCccccc--ccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcC
Q psy463 613 GISVAPVTDWIYYD--TIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD 690 (790)
Q Consensus 613 ~v~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~ 690 (790)
+++.+|+.++.... ......+++.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~g~~----------------------------------------------------- 197 (283)
T PLN02442 171 VSAFAPIANPINCPWGQKAFTNYLGSD----------------------------------------------------- 197 (283)
T ss_pred EEEECCccCcccCchhhHHHHHHcCCC-----------------------------------------------------
Confidence 99999987643100 00000011100
Q ss_pred cchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchh-hhHHHHHHHHhcCCceEEEEcCCCCCc
Q psy463 691 IMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQ-QSMMLAKSLQHADIMFQSQTYPDEEHG 769 (790)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~-~~~~l~~~l~~~g~~~~~~~~p~~~H~ 769 (790)
......+...+++..+... ++|+|++||++|..++.. ++..+++++++.|.++++.++|+.+|.
T Consensus 198 --------------~~~~~~~d~~~~~~~~~~~-~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~ 262 (283)
T PLN02442 198 --------------KADWEEYDATELVSKFNDV-SATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHS 262 (283)
T ss_pred --------------hhhHHHcChhhhhhhcccc-CCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCcc
Confidence 0000111122223444456 899999999999999974 688999999999999999999999997
Q ss_pred CCCcchHHHHHHHHHHHHhhC
Q psy463 770 LIGVRPHFYHTLERFLDSCFA 790 (790)
Q Consensus 770 ~~~~~~~~~~~i~~fl~~~l~ 790 (790)
+. ....+.+....|..++++
T Consensus 263 ~~-~~~~~i~~~~~~~~~~~~ 282 (283)
T PLN02442 263 YF-FIATFIDDHINHHAQALK 282 (283)
T ss_pred HH-HHHHHHHHHHHHHHHHhc
Confidence 76 233344444555555543
No 31
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.79 E-value=1.7e-17 Score=179.32 Aligned_cols=161 Identities=11% Similarity=0.075 Sum_probs=115.2
Q ss_pred EEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463 251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW 330 (790)
Q Consensus 251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~ 330 (790)
.+.|||||+.+++.....+..+||+++++++..++++.... ....+.|||||++|+|... .+| .
T Consensus 252 ~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~------~~~~~~wSpDG~~i~f~s~----~~g------~ 315 (429)
T PRK01742 252 APAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAG------NNTEPSWSPDGQSILFTSD----RSG------S 315 (429)
T ss_pred ceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCC------CcCCEEECCCCCEEEEEEC----CCC------C
Confidence 57999999966665433445679999999998888875432 2458999999999996543 566 5
Q ss_pred cEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCC
Q psy463 331 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSAN 410 (790)
Q Consensus 331 ~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~ 410 (790)
.+||.++..++. .+.++... . .+.|+|||+.|++.+.. .++.+++.+ ++.+.++..
T Consensus 316 ~~I~~~~~~~~~------~~~l~~~~---~-~~~~SpDG~~ia~~~~~------~i~~~Dl~~--g~~~~lt~~------ 371 (429)
T PRK01742 316 PQVYRMSASGGG------ASLVGGRG---Y-SAQISADGKTLVMINGD------NVVKQDLTS--GSTEVLSST------ 371 (429)
T ss_pred ceEEEEECCCCC------eEEecCCC---C-CccCCCCCCEEEEEcCC------CEEEEECCC--CCeEEecCC------
Confidence 689999988776 55554322 2 36899999999987642 577788876 565666542
Q ss_pred CcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEec
Q psy463 411 QKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWD 453 (790)
Q Consensus 411 ~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 453 (790)
.....++|||||+++++.....+...+++++.+++..+.+.
T Consensus 372 --~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~ 412 (429)
T PRK01742 372 --FLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLP 412 (429)
T ss_pred --CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEcc
Confidence 12345889999999999876544556777777776666553
No 32
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.79 E-value=8.6e-18 Score=178.70 Aligned_cols=248 Identities=19% Similarity=0.178 Sum_probs=152.9
Q ss_pred ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463 469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG 548 (790)
Q Consensus 469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g 548 (790)
..+.+.++..+|..+.|+++.|.. .++.|+||+.||..+.. .+.|. .....++++||+|+++|+||+|.+.
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~-----~~~~P~Vli~gG~~~~~--~~~~~--~~~~~La~~Gy~vl~~D~pG~G~s~ 237 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKG-----DGPFPTVLVCGGLDSLQ--TDYYR--LFRDYLAPRGIAMLTIDMPSVGFSS 237 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCC-----CCCccEEEEeCCcccch--hhhHH--HHHHHHHhCCCEEEEECCCCCCCCC
Confidence 477889998888899999999972 35678887766544321 12222 2233455689999999999987543
Q ss_pred hhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc
Q psy463 549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI 628 (790)
Q Consensus 549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~ 628 (790)
.. . ..........++++++.+ .+.+|.+||+++|||+||++++.++..+|. +++++|+.+|+.+......
T Consensus 238 ~~-~------~~~d~~~~~~avld~l~~-~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~-ri~a~V~~~~~~~~~~~~~- 307 (414)
T PRK05077 238 KW-K------LTQDSSLLHQAVLNALPN-VPWVDHTRVAAFGFRFGANVAVRLAYLEPP-RLKAVACLGPVVHTLLTDP- 307 (414)
T ss_pred CC-C------ccccHHHHHHHHHHHHHh-CcccCcccEEEEEEChHHHHHHHHHHhCCc-CceEEEEECCccchhhcch-
Confidence 21 0 000111122467788877 777899999999999999999999988774 8999999888754211000
Q ss_pred chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcc
Q psy463 629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNL 708 (790)
Q Consensus 629 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 708 (790)
...-.. +..+... ....+ |..+ . ....+...+...... .
T Consensus 308 --~~~~~~------p~~~~~~----la~~l---------g~~~--~---~~~~l~~~l~~~sl~---------------~ 346 (414)
T PRK05077 308 --KRQQQV------PEMYLDV----LASRL---------GMHD--A---SDEALRVELNRYSLK---------------V 346 (414)
T ss_pred --hhhhhc------hHHHHHH----HHHHh---------CCCC--C---ChHHHHHHhhhccch---------------h
Confidence 000000 0001000 00000 0000 0 001111111111000 0
Q ss_pred hhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHh
Q psy463 709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSC 788 (790)
Q Consensus 709 ~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~ 788 (790)
. . ....++ ++|+|++||++|.++|++.++.+.+..+. .+++++|++ |.+. ...+++..+.+||+++
T Consensus 347 ~-----~--~l~~~i-~~PvLiI~G~~D~ivP~~~a~~l~~~~~~----~~l~~i~~~-~~~e-~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 347 Q-----G--LLGRRC-PTPMLSGYWKNDPFSPEEDSRLIASSSAD----GKLLEIPFK-PVYR-NFDKALQEISDWLEDR 412 (414)
T ss_pred h-----h--hhccCC-CCcEEEEecCCCCCCCHHHHHHHHHhCCC----CeEEEccCC-CccC-CHHHHHHHHHHHHHHH
Confidence 0 0 012467 89999999999999999999988766543 488999986 3333 6889999999999998
Q ss_pred hC
Q psy463 789 FA 790 (790)
Q Consensus 789 l~ 790 (790)
|.
T Consensus 413 l~ 414 (414)
T PRK05077 413 LC 414 (414)
T ss_pred hC
Confidence 73
No 33
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.79 E-value=2e-17 Score=167.58 Aligned_cols=238 Identities=16% Similarity=0.143 Sum_probs=148.9
Q ss_pred EEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccc-hHHHHHhcCCeEEEEEcC--CCCCCC
Q psy463 472 YMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD-WNLYLADNKDIVVAYIDG--RNSALK 547 (790)
Q Consensus 472 ~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~-~~~~~~~~~G~~v~~~d~--rG~~~~ 547 (790)
...+.+. .+..+.+.+|+|+++. .+++|+|+++||.++.. ..|... ....++++.|+.|++||. +|++..
T Consensus 15 ~~~~~s~~~~~~~~~~v~~P~~~~---~~~~P~vvllHG~~~~~---~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~ 88 (275)
T TIGR02821 15 FYRHKSETCGVPMTFGVFLPPQAA---AGPVPVLWYLSGLTCTH---ENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIA 88 (275)
T ss_pred EEEEeccccCCceEEEEEcCCCcc---CCCCCEEEEccCCCCCc---cHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCC
Confidence 3444433 4678899999998753 34689999999988762 333221 123455567999999997 554422
Q ss_pred hh--hhH---------hhhhccCC-c-cchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEE
Q psy463 548 GN--TLK---------YAGYRRLG-T-VEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGI 614 (790)
Q Consensus 548 g~--~~~---------~~~~~~~~-~-~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v 614 (790)
+. .|. +.....+. . .....+.+.+..+++....+|.++++|+|+||||++++.++.++|+ .+++++
T Consensus 89 ~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~-~~~~~~ 167 (275)
T TIGR02821 89 GEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD-RFKSVS 167 (275)
T ss_pred CCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc-cceEEE
Confidence 21 110 00000000 0 1122223334443432223788899999999999999999999886 899999
Q ss_pred EeCCCCCcccccc--cchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcc
Q psy463 615 SVAPVTDWIYYDT--IYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM 692 (790)
Q Consensus 615 ~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~ 692 (790)
+.+|+.+...... .....+++.+ .
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~l~~~-----------------------------------------------------~- 193 (275)
T TIGR02821 168 AFAPIVAPSRCPWGQKAFSAYLGAD-----------------------------------------------------E- 193 (275)
T ss_pred EECCccCcccCcchHHHHHHHhccc-----------------------------------------------------c-
Confidence 9999866421000 0000000000 0
Q ss_pred hhcccccCCCCcCCcchhhhhhhhhhhhh--ccCCccEEEEecCCCcccch-hhhHHHHHHHHhcCCceEEEEcCCCCCc
Q psy463 693 FQSQRYMGLPTFEDNLEGYKIAALNNKVD--RIRDKQYLLVHGTMDDNVHF-QQSMMLAKSLQHADIMFQSQTYPDEEHG 769 (790)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~P~Lii~G~~D~~v~~-~~~~~l~~~l~~~g~~~~~~~~p~~~H~ 769 (790)
..+...++...+. +. ..|+|+.||+.|..++. .++..+.++|+++|+++++.++||++|.
T Consensus 194 ----------------~~~~~~~~~~~~~~~~~-~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~ 256 (275)
T TIGR02821 194 ----------------AAWRSYDASLLVADGGR-HSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHS 256 (275)
T ss_pred ----------------cchhhcchHHHHhhccc-CCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCcc
Confidence 0000001112222 23 68999999999999999 6889999999999999999999999999
Q ss_pred CCCcchHHHHHHHHHHHHh
Q psy463 770 LIGVRPHFYHTLERFLDSC 788 (790)
Q Consensus 770 ~~~~~~~~~~~i~~fl~~~ 788 (790)
+. .....+...++|+..+
T Consensus 257 f~-~~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 257 YY-FIASFIADHLRHHAER 274 (275)
T ss_pred ch-hHHHhHHHHHHHHHhh
Confidence 88 3556666777776654
No 34
>KOG2237|consensus
Probab=99.78 E-value=2.6e-15 Score=155.50 Aligned_cols=188 Identities=21% Similarity=0.231 Sum_probs=149.4
Q ss_pred CcEEEEEeecCC-CCeEEEEecCCCe-----EEEeccchhHHHhhccCCCC--ceEEEEEEcCCCcEEEEEEEeCCCCCC
Q psy463 424 VSYYVLSCIGPG-IPEIMLFDKTGQR-----LLYWDTNEDLRTALTNITLP--SVEYMSVPIQPNMEAQVKLFLPPGIDT 495 (790)
Q Consensus 424 g~~~~~~~~~~~-~~~i~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~dg~~i~~~~~~P~~~~~ 495 (790)
.+.+-|..++.- |+.||-+|+..++ .+.++.+ +.++... .++.+.+.++||..++-.++.-...+
T Consensus 393 ~~~~~f~~sS~l~P~~iy~yDl~~~~~e~~vf~e~~~~------lpg~~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~~k- 465 (712)
T KOG2237|consen 393 SSTIRFQFSSFLTPGSIYDYDLANGKPEPSVFREITVV------LPGFDASDYVVERIEVSSKDGTKVPMFIVYKKDIK- 465 (712)
T ss_pred CceEEEEEeccCCCCeEEEeeccCCCCCCcceeeeccc------cCcccccceEEEEEEEecCCCCccceEEEEechhh-
Confidence 456667777776 9999999997752 2233322 2444443 67888999999999998888755544
Q ss_pred CCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHH
Q psy463 496 SGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQ 575 (790)
Q Consensus 496 ~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~ 575 (790)
..+..|.+++.||+-+-. +...|+.. ...++ ++|++....|.||.|++|..|...+........++|+++++++|.
T Consensus 466 -~dg~~P~LLygYGay~is-l~p~f~~s-rl~ll-d~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLv 541 (712)
T KOG2237|consen 466 -LDGSKPLLLYGYGAYGIS-LDPSFRAS-RLSLL-DRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLV 541 (712)
T ss_pred -hcCCCceEEEEeccccee-eccccccc-eeEEE-ecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHH
Confidence 456789999999987753 35555532 11233 489999999999999999999988887777788999999999999
Q ss_pred HhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc
Q psy463 576 ENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY 624 (790)
Q Consensus 576 ~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~ 624 (790)
+ .+++.+++.++.|.|.||.++..++.++|+ .|.|+++..|+.|+..
T Consensus 542 e-~gyt~~~kL~i~G~SaGGlLvga~iN~rPd-LF~avia~VpfmDvL~ 588 (712)
T KOG2237|consen 542 E-NGYTQPSKLAIEGGSAGGLLVGACINQRPD-LFGAVIAKVPFMDVLN 588 (712)
T ss_pred H-cCCCCccceeEecccCccchhHHHhccCch-HhhhhhhcCcceehhh
Confidence 9 899999999999999999999999999986 9999999999988753
No 35
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.77 E-value=5.1e-16 Score=153.17 Aligned_cols=352 Identities=14% Similarity=0.136 Sum_probs=212.5
Q ss_pred CCceeEeCCCCCceEEEEec--C--CceeEEEecccCCCCCCCcCCCccccCCCCcc---ccccCCCcceeEeeeecccc
Q psy463 9 SSSALWFSPSGNNLAYASFD--D--NRTVIMTIPFYGNPGHPSSQYTQAINLREPVL---SRVNWANESVVAAWVNRVQN 81 (790)
Q Consensus 9 ~~~~~~wSPDG~~iaf~~~~--~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~w~~~~~~~~~~~r~~~ 81 (790)
=...|.|||||++|||++.- . ...++|++|..+|+ ++|+|+... ..++|.+|+.++..+---|
T Consensus 80 Vvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~Ge---------~kRiTyfGr~fT~VaG~~~dg~iiV~TD~~t- 149 (668)
T COG4946 80 VVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDGE---------AKRITYFGRRFTRVAGWIPDGEIIVSTDFHT- 149 (668)
T ss_pred eeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCCc---------EEEEEEeccccceeeccCCCCCEEEEeccCC-
Confidence 34567899999999996532 2 24689999999997 777776642 2346777766553332221
Q ss_pred eeEEEEeeCCCCeeeEEEeecCCCCccccCC-cc---ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCcc
Q psy463 82 RARITRCSINEGTCDVVFSRDLDRGWFEPFD-HL---RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIK 157 (790)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ 157 (790)
+-.+++.++....+..-.++.. .| -.-.||..++--...+-..++.|+||+-+.||+-...+..
T Consensus 150 ---------PF~q~~~lYkv~~dg~~~e~LnlGpathiv~~dg~ivigRntydLP~WK~YkGGtrGklWis~d~g~t--- 217 (668)
T COG4946 150 ---------PFSQWTELYKVNVDGIKTEPLNLGPATHIVIKDGIIVIGRNTYDLPHWKGYKGGTRGKLWISSDGGKT--- 217 (668)
T ss_pred ---------CcccceeeeEEccCCceeeeccCCceeeEEEeCCEEEEccCcccCcccccccCCccceEEEEecCCcc---
Confidence 2234555555544444222211 22 2346773332222334446799999999999987765533
Q ss_pred CCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhh
Q psy463 158 DKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILA 237 (790)
Q Consensus 158 ~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~ 237 (790)
...+-+-+.++..++-.. +++||++...+. .+||.+|+++.. .+..|
T Consensus 218 ---FeK~vdl~~~vS~PmIV~----~RvYFlsD~eG~---------GnlYSvdldGkD------lrrHT----------- 264 (668)
T COG4946 218 ---FEKFVDLDGNVSSPMIVG----ERVYFLSDHEGV---------GNLYSVDLDGKD------LRRHT----------- 264 (668)
T ss_pred ---eeeeeecCCCcCCceEEc----ceEEEEecccCc---------cceEEeccCCch------hhhcC-----------
Confidence 111111122233333332 238999876544 799999999876 34444
Q ss_pred cccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEE-eCC-----CcccccCCce-eEcc-CCC
Q psy463 238 WDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSR-DLD-----RGWFEPFDHL-RFSS-DGK 309 (790)
Q Consensus 238 ~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~-~~~-----~~~~~~~~~~-~~sp-Dg~ 309 (790)
+...|+.+ .-+.|||.+.+...+. ||++|.++...+.|--. +.+ ..+..+.... .||+ +|.
T Consensus 265 ------nFtdYY~R-~~nsDGkrIvFq~~Gd----IylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd 333 (668)
T COG4946 265 ------NFTDYYPR-NANSDGKRIVFQNAGD----IYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGD 333 (668)
T ss_pred ------Cchhcccc-ccCCCCcEEEEecCCc----EEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCc
Confidence 44444432 3477999666665554 99999988766654221 100 1111100000 0111 344
Q ss_pred EEEEEEcccc-----------------------------------ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccC
Q psy463 310 KMLLILSHNQ-----------------------------------ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR 354 (790)
Q Consensus 310 ~i~~~~~~~~-----------------------------------~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~ 354 (790)
.|++ +|... ..+| ..|-++|.++++ .+.+..
T Consensus 334 ~ia~-VSRGkaFi~~~~~~~~iqv~~~~~VrY~r~~~~~e~~vigt~dg-------D~l~iyd~~~~e------~kr~e~ 399 (668)
T COG4946 334 YIAL-VSRGKAFIMRPWDGYSIQVGKKGGVRYRRIQVDPEGDVIGTNDG-------DKLGIYDKDGGE------VKRIEK 399 (668)
T ss_pred EEEE-EecCcEEEECCCCCeeEEcCCCCceEEEEEccCCcceEEeccCC-------ceEEEEecCCce------EEEeeC
Confidence 4442 22110 0122 256777888877 777766
Q ss_pred CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecC
Q psy463 355 GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGP 434 (790)
Q Consensus 355 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~ 434 (790)
+-..+.. ...++|||.++...++ .+||.++++. ++++.+-.+ ..+.+....|+|+++++++.....
T Consensus 400 ~lg~I~a-v~vs~dGK~~vvaNdr-----~el~vididn--gnv~~idkS------~~~lItdf~~~~nsr~iAYafP~g 465 (668)
T COG4946 400 DLGNIEA-VKVSPDGKKVVVANDR-----FELWVIDIDN--GNVRLIDKS------EYGLITDFDWHPNSRWIAYAFPEG 465 (668)
T ss_pred CccceEE-EEEcCCCcEEEEEcCc-----eEEEEEEecC--CCeeEeccc------ccceeEEEEEcCCceeEEEecCcc
Confidence 5544444 7789999988776555 7999999998 777766553 556788899999999999986532
Q ss_pred C-CCeEEEEecCCCeEEEecc
Q psy463 435 G-IPEIMLFDKTGQRLLYWDT 454 (790)
Q Consensus 435 ~-~~~i~~~~~~~~~~~~l~~ 454 (790)
= ...|.++|++++++..++.
T Consensus 466 y~tq~Iklydm~~~Kiy~vTT 486 (668)
T COG4946 466 YYTQSIKLYDMDGGKIYDVTT 486 (668)
T ss_pred eeeeeEEEEecCCCeEEEecC
Confidence 2 6779999999988876654
No 36
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.76 E-value=2.5e-17 Score=177.97 Aligned_cols=133 Identities=17% Similarity=0.185 Sum_probs=90.0
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD 328 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~ 328 (790)
...+.|||||+.++++....+..+||.++..++..+.+. . .+ ..+.|||||+.|++...
T Consensus 294 ~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~-~---~~-----~~~~~SpDG~~ia~~~~------------ 352 (429)
T PRK01742 294 NTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVG-G---RG-----YSAQISADGKTLVMING------------ 352 (429)
T ss_pred cCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEec-C---CC-----CCccCCCCCCEEEEEcC------------
Confidence 456899999995555544345568999999887766552 1 11 25789999999985332
Q ss_pred cccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccccc
Q psy463 329 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTS 408 (790)
Q Consensus 329 ~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~ 408 (790)
..++++|+.+++ .+.++... .. ..+.|+|||+.|+|.+.++.. ..++.++.++ ...+.|+.
T Consensus 353 --~~i~~~Dl~~g~------~~~lt~~~-~~-~~~~~sPdG~~i~~~s~~g~~--~~l~~~~~~G--~~~~~l~~----- 413 (429)
T PRK01742 353 --DNVVKQDLTSGS------TEVLSSTF-LD-ESPSISPNGIMIIYSSTQGLG--KVLQLVSADG--RFKARLPG----- 413 (429)
T ss_pred --CCEEEEECCCCC------eEEecCCC-CC-CCceECCCCCEEEEEEcCCCc--eEEEEEECCC--CceEEccC-----
Confidence 247889998887 66666442 22 238899999999999877542 4566677766 44555543
Q ss_pred CCCcccEEEEEEecC
Q psy463 409 ANQKCSYSGATFSTN 423 (790)
Q Consensus 409 ~~~~~~~~~~~~s~d 423 (790)
..+....++|||-
T Consensus 414 --~~g~~~~p~wsp~ 426 (429)
T PRK01742 414 --SDGQVKFPAWSPY 426 (429)
T ss_pred --CCCCCCCcccCCC
Confidence 2345566888873
No 37
>PHA02857 monoglyceride lipase; Provisional
Probab=99.76 E-value=4.3e-17 Score=166.68 Aligned_cols=264 Identities=13% Similarity=0.053 Sum_probs=151.7
Q ss_pred EcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhh
Q psy463 476 PIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAG 555 (790)
Q Consensus 476 ~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~ 555 (790)
...||..+.+.++.|.+ .+.|+|+++||.+... ..|. .....+++.||.|+++|+||+|.+.... ..
T Consensus 6 ~~~~g~~l~~~~~~~~~------~~~~~v~llHG~~~~~---~~~~--~~~~~l~~~g~~via~D~~G~G~S~~~~--~~ 72 (276)
T PHA02857 6 FNLDNDYIYCKYWKPIT------YPKALVFISHGAGEHS---GRYE--ELAENISSLGILVFSHDHIGHGRSNGEK--MM 72 (276)
T ss_pred ecCCCCEEEEEeccCCC------CCCEEEEEeCCCcccc---chHH--HHHHHHHhCCCEEEEccCCCCCCCCCcc--CC
Confidence 34599999999998842 3458899999987652 2333 2334455579999999999988653210 00
Q ss_pred hccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcC
Q psy463 556 YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMG 635 (790)
Q Consensus 556 ~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g 635 (790)
...+. ..+.|+...+.++... ....+++++||||||.+++.++.++|+ .++++|+.+|..+.... .+....
T Consensus 73 ~~~~~-~~~~d~~~~l~~~~~~---~~~~~~~lvG~S~GG~ia~~~a~~~p~-~i~~lil~~p~~~~~~~--~~~~~~-- 143 (276)
T PHA02857 73 IDDFG-VYVRDVVQHVVTIKST---YPGVPVFLLGHSMGATISILAAYKNPN-LFTAMILMSPLVNAEAV--PRLNLL-- 143 (276)
T ss_pred cCCHH-HHHHHHHHHHHHHHhh---CCCCCEEEEEcCchHHHHHHHHHhCcc-ccceEEEeccccccccc--cHHHHH--
Confidence 11111 2256666666666542 224689999999999999999998885 78999999987542210 000000
Q ss_pred CCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhh-hh
Q psy463 636 LPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYK-IA 714 (790)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 714 (790)
..+. ..... +...... ................. .+.. ................ ..
T Consensus 144 --------~~~~-------~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~ 199 (276)
T PHA02857 144 --------AAKL-------MGIFY--PNKIVGK-LCPESVSRDMDEVYKYQ--YDPL----VNHEKIKAGFASQVLKATN 199 (276)
T ss_pred --------HHHH-------HHHhC--CCCccCC-CCHhhccCCHHHHHHHh--cCCC----ccCCCccHHHHHHHHHHHH
Confidence 0000 00000 0000000 00000000000000000 0000 0000000000000000 00
Q ss_pred hhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC----cchHHHHHHHHHHHHhh
Q psy463 715 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG----VRPHFYHTLERFLDSCF 789 (790)
Q Consensus 715 ~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~i~~fl~~~l 789 (790)
.....+.++ ++|+|++||++|.++|+..+..+++.+.. .+++.++++++|.+.. .++++++.+.+||+++-
T Consensus 200 ~~~~~l~~i-~~Pvliv~G~~D~i~~~~~~~~l~~~~~~---~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 200 KVRKIIPKI-KTPILILQGTNNEISDVSGAYYFMQHANC---NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred HHHHhcccC-CCCEEEEecCCCCcCChHHHHHHHHHccC---CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 112456678 99999999999999999999999887743 3589999999999986 36789999999999863
No 38
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.76 E-value=2.9e-17 Score=172.56 Aligned_cols=125 Identities=17% Similarity=0.162 Sum_probs=92.3
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
...+....++|||||+.+++++..++.++||+++++++..++++...+. ...|.|||||++|+|... ..|
T Consensus 279 ~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~------~~~p~~SpdG~~i~~~~~----~~g 348 (425)
T COG0823 279 NGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGG------NSNPVWSPDGDKIVFESS----SGG 348 (425)
T ss_pred cCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCC------CcCccCCCCCCEEEEEec----cCC
Confidence 3444455899999999666666666788999999999999888876532 337999999999997664 345
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
..++...++.++. ..+.++..... ..+.|+++|+.+.|.+..+ ....|+.++..+
T Consensus 349 ------~~~i~~~~~~~~~-----~~~~lt~~~~~--e~ps~~~ng~~i~~~s~~~--~~~~l~~~s~~g 403 (425)
T COG0823 349 ------QWDIDKNDLASGG-----KIRILTSTYLN--ESPSWAPNGRMIMFSSGQG--GGSVLSLVSLDG 403 (425)
T ss_pred ------ceeeEEeccCCCC-----cEEEccccccC--CCCCcCCCCceEEEeccCC--CCceEEEeeccc
Confidence 4678888887665 14455544322 2389999999999998874 337888888776
No 39
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.75 E-value=2.7e-16 Score=171.25 Aligned_cols=168 Identities=12% Similarity=0.085 Sum_probs=122.4
Q ss_pred EEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463 251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW 330 (790)
Q Consensus 251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~ 330 (790)
.+.|||||+.++++....+..+||.+++.++..+.++.... ....+.|+|||++|+|... +.| .
T Consensus 238 ~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~------~~~~~~~s~dg~~l~~~s~----~~g------~ 301 (417)
T TIGR02800 238 APAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPG------IDTEPSWSPDGKSIAFTSD----RGG------S 301 (417)
T ss_pred ceEECCCCCEEEEEECCCCCccEEEEECCCCCEEECCCCCC------CCCCEEECCCCCEEEEEEC----CCC------C
Confidence 47899999955555443445679999999988777764321 1347899999999996543 556 5
Q ss_pred cEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCC
Q psy463 331 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSAN 410 (790)
Q Consensus 331 ~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~ 410 (790)
.+||++++++++ .++|+....... .+.|+|||+.|+|...... ..+|+.+++.+ +..+.++..
T Consensus 302 ~~iy~~d~~~~~------~~~l~~~~~~~~-~~~~spdg~~i~~~~~~~~--~~~i~~~d~~~--~~~~~l~~~------ 364 (417)
T TIGR02800 302 PQIYMMDADGGE------VRRLTFRGGYNA-SPSWSPDGDLIAFVHREGG--GFNIAVMDLDG--GGERVLTDT------ 364 (417)
T ss_pred ceEEEEECCCCC------EEEeecCCCCcc-CeEECCCCCEEEEEEccCC--ceEEEEEeCCC--CCeEEccCC------
Confidence 689999998887 677775433333 3789999999999887632 27899999987 555655531
Q ss_pred CcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEec
Q psy463 411 QKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWD 453 (790)
Q Consensus 411 ~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 453 (790)
.....+.|||||+++++.+...+...+++.+.+++..+.++
T Consensus 365 --~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~g~~~~~~~ 405 (417)
T TIGR02800 365 --GLDESPSFAPNGRMILYATTRGGRGVLGLVSTDGRFRARLP 405 (417)
T ss_pred --CCCCCceECCCCCEEEEEEeCCCcEEEEEEECCCceeeECC
Confidence 12345789999999999988777778888887776655543
No 40
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.75 E-value=1.7e-17 Score=149.33 Aligned_cols=221 Identities=15% Similarity=0.078 Sum_probs=150.1
Q ss_pred cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463 502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI 581 (790)
Q Consensus 502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~ 581 (790)
-.|+++||+.|+.. ...+....+.++||.|.+|.++|+|-....|.......| +.|+.++.++|.+ .++
T Consensus 16 ~AVLllHGFTGt~~-----Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~L~~-~gy- 84 (243)
T COG1647 16 RAVLLLHGFTGTPR-----DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRDLKE-AGY- 84 (243)
T ss_pred EEEEEEeccCCCcH-----HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHHHHH-cCC-
Confidence 67899999998732 244666777789999999999999998888887766655 7888889999986 453
Q ss_pred CCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCC
Q psy463 582 DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDK 661 (790)
Q Consensus 582 d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (790)
+.|+|+|.||||.+++.++.++| .+.++..|+..+.......+ +. ... ++++.++.
T Consensus 85 --~eI~v~GlSmGGv~alkla~~~p---~K~iv~m~a~~~~k~~~~ii-e~----------~l~--------y~~~~kk~ 140 (243)
T COG1647 85 --DEIAVVGLSMGGVFALKLAYHYP---PKKIVPMCAPVNVKSWRIII-EG----------LLE--------YFRNAKKY 140 (243)
T ss_pred --CeEEEEeecchhHHHHHHHhhCC---ccceeeecCCcccccchhhh-HH----------HHH--------HHHHhhhc
Confidence 68999999999999999999887 35555555544322111000 00 000 00111000
Q ss_pred cEEEE---eecCCC--ccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCC
Q psy463 662 QYLLV---HGTMDD--NVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMD 736 (790)
Q Consensus 662 p~l~~---~g~~d~--~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D 736 (790)
+..-. ..+... ..+..+..++.+.+.. ....++.| ..|+|++.|.+|
T Consensus 141 e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~---------------------------~~~~~~~I-~~pt~vvq~~~D 192 (243)
T COG1647 141 EGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKD---------------------------ARRSLDKI-YSPTLVVQGRQD 192 (243)
T ss_pred cCCCHHHHHHHHHHhhcchHHHHHHHHHHHHH---------------------------HHhhhhhc-ccchhheecccC
Confidence 00000 000000 0011222222222211 11567888 999999999999
Q ss_pred cccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHH
Q psy463 737 DNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDS 787 (790)
Q Consensus 737 ~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~ 787 (790)
+.||.+.+..+++.+... +.++.+|+++||.+.. .++.+.+.+..||++
T Consensus 193 ~mv~~~sA~~Iy~~v~s~--~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 193 EMVPAESANFIYDHVESD--DKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CCCCHHHHHHHHHhccCC--cceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 999999999999998865 4599999999999998 889999999999973
No 41
>PRK10162 acetyl esterase; Provisional
Probab=99.74 E-value=1.4e-16 Score=164.54 Aligned_cols=246 Identities=16% Similarity=0.149 Sum_probs=156.8
Q ss_pred eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463 470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN 549 (790)
Q Consensus 470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~ 549 (790)
.+.+.+...+| .+...+|.|.. ...|+||++|||+......+.+. .+...++...|+.|+.+|||.++....
T Consensus 57 ~~~~~i~~~~g-~i~~~~y~P~~------~~~p~vv~~HGGg~~~g~~~~~~-~~~~~la~~~g~~Vv~vdYrlape~~~ 128 (318)
T PRK10162 57 TRAYMVPTPYG-QVETRLYYPQP------DSQATLFYLHGGGFILGNLDTHD-RIMRLLASYSGCTVIGIDYTLSPEARF 128 (318)
T ss_pred EEEEEEecCCC-ceEEEEECCCC------CCCCEEEEEeCCcccCCCchhhh-HHHHHHHHHcCCEEEEecCCCCCCCCC
Confidence 45667777677 58899999952 23589999999987543222322 234455555699999999998765321
Q ss_pred hhHhhhhccCCccchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCC-----CCceEEEEEeCCCCC
Q psy463 550 TLKYAGYRRLGTVEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDP-----SNVFKCGISVAPVTD 621 (790)
Q Consensus 550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p-----~~~~~~~v~~~~~~~ 621 (790)
+ ..++|+.++++|+.++ ++ +|.+||+|+|+|+||.+++.++.+.. ...++++++.+|+.+
T Consensus 129 p-----------~~~~D~~~a~~~l~~~~~~~~-~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 129 P-----------QAIEEIVAVCCYFHQHAEDYG-INMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred C-----------CcHHHHHHHHHHHHHhHHHhC-CChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 1 3578999999998753 23 68899999999999999998876421 136778888888766
Q ss_pred cccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCC
Q psy463 622 WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGL 701 (790)
Q Consensus 622 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~ 701 (790)
...... ....+.. + ..........+.+. |.+.
T Consensus 197 ~~~~~s---~~~~~~~--------~-------------------------~~l~~~~~~~~~~~------------y~~~ 228 (318)
T PRK10162 197 LRDSVS---RRLLGGV--------W-------------------------DGLTQQDLQMYEEA------------YLSN 228 (318)
T ss_pred CCCChh---HHHhCCC--------c-------------------------cccCHHHHHHHHHH------------hCCC
Confidence 421000 0000000 0 00000000000000 0000
Q ss_pred CCcCCcchhhhhhhhh-hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC------cc
Q psy463 702 PTFEDNLEGYKIAALN-NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG------VR 774 (790)
Q Consensus 702 ~~~~~~~~~~~~~~~~-~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~------~~ 774 (790)
+. +....+ .++. ..+..- -.|+||++|+.|... .++..+++.|+++|+++++++++|..|.+.. ..
T Consensus 229 ~~--~~~~p~--~~p~~~~l~~~-lPp~~i~~g~~D~L~--de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a 301 (318)
T PRK10162 229 DA--DRESPY--YCLFNNDLTRD-VPPCFIAGAEFDPLL--DDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTA 301 (318)
T ss_pred cc--ccCCcc--cCcchhhhhcC-CCCeEEEecCCCcCc--ChHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHH
Confidence 00 000000 0010 122111 379999999999875 5899999999999999999999999999864 35
Q ss_pred hHHHHHHHHHHHHhhC
Q psy463 775 PHFYHTLERFLDSCFA 790 (790)
Q Consensus 775 ~~~~~~i~~fl~~~l~ 790 (790)
.+.++.+.+||+++|+
T Consensus 302 ~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 302 DDALRDGAQFFTAQLK 317 (318)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 5788999999998875
No 42
>PRK10749 lysophospholipase L2; Provisional
Probab=99.74 E-value=1.4e-16 Score=166.43 Aligned_cols=287 Identities=15% Similarity=0.098 Sum_probs=155.0
Q ss_pred eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463 470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN 549 (790)
Q Consensus 470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~ 549 (790)
.+...+...+|.++++..+.|.. +.++|+++||..+.. ..|. .+...+ ++.||.|+++|+||+|.++.
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~~-------~~~~vll~HG~~~~~---~~y~-~~~~~l-~~~g~~v~~~D~~G~G~S~~ 97 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAPH-------HDRVVVICPGRIESY---VKYA-ELAYDL-FHLGYDVLIIDHRGQGRSGR 97 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCCC-------CCcEEEEECCccchH---HHHH-HHHHHH-HHCCCeEEEEcCCCCCCCCC
Confidence 44556666789999998887642 236899999986542 1122 122233 45899999999999987653
Q ss_pred hhHhhhhccCC--ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccc-c
Q psy463 550 TLKYAGYRRLG--TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYY-D 626 (790)
Q Consensus 550 ~~~~~~~~~~~--~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~-~ 626 (790)
.......+... ...+.|+.+.++.+.. ..+..++.++||||||.+++.++.++|. .++++|+.+|....... .
T Consensus 98 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~~~~~l~GhSmGG~ia~~~a~~~p~-~v~~lvl~~p~~~~~~~~~ 173 (330)
T PRK10749 98 LLDDPHRGHVERFNDYVDDLAAFWQQEIQ---PGPYRKRYALAHSMGGAILTLFLQRHPG-VFDAIALCAPMFGIVLPLP 173 (330)
T ss_pred CCCCCCcCccccHHHHHHHHHHHHHHHHh---cCCCCCeEEEEEcHHHHHHHHHHHhCCC-CcceEEEECchhccCCCCC
Confidence 32111001000 0123444444444333 1245789999999999999999998875 78899988886432110 0
Q ss_pred ccchhhhcCCCC-ccCchhhhhhccccchhhhccCCcEEEEeecCCCcc-ChhhHHHHHHHHHhcCcchhcccccCCCCc
Q psy463 627 TIYSERYMGLPT-FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNV-HFQQSMMLAKSLQHADIMFQSQRYMGLPTF 704 (790)
Q Consensus 627 ~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v-~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 704 (790)
.......+.... .......+... .......+ -..+... .........+.... .... ..+.+.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~-~~~~----~~~~~~~ 238 (330)
T PRK10749 174 SWMARRILNWAEGHPRIRDGYAIG-----TGRWRPLP-----FAINVLTHSRERYRRNLRFYAD-DPEL----RVGGPTY 238 (330)
T ss_pred cHHHHHHHHHHHHhcCCCCcCCCC-----CCCCCCCC-----cCCCCCCCCHHHHHHHHHHHHh-CCCc----ccCCCcH
Confidence 000000000000 00000000000 00000000 0000000 00111111121111 1100 0000000
Q ss_pred CCcchhhhh-hhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCC---ceEEEEcCCCCCcCCC----cchH
Q psy463 705 EDNLEGYKI-AALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI---MFQSQTYPDEEHGLIG----VRPH 776 (790)
Q Consensus 705 ~~~~~~~~~-~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~---~~~~~~~p~~~H~~~~----~~~~ 776 (790)
......... ......++++ ++|+|++||++|.+++++.+..+++.++.++. .+++++|||++|.+.. .++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~i-~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~ 317 (330)
T PRK10749 239 HWVRESILAGEQVLAGAGDI-TTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSV 317 (330)
T ss_pred HHHHHHHHHHHHHHhhccCC-CCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHH
Confidence 000000000 1123456778 99999999999999999999999999987653 4589999999999876 2678
Q ss_pred HHHHHHHHHHHh
Q psy463 777 FYHTLERFLDSC 788 (790)
Q Consensus 777 ~~~~i~~fl~~~ 788 (790)
+++.|.+||+++
T Consensus 318 v~~~i~~fl~~~ 329 (330)
T PRK10749 318 ALNAIVDFFNRH 329 (330)
T ss_pred HHHHHHHHHhhc
Confidence 999999999875
No 43
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.74 E-value=1.2e-16 Score=168.24 Aligned_cols=272 Identities=13% Similarity=0.087 Sum_probs=157.4
Q ss_pred EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463 471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT 550 (790)
Q Consensus 471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~ 550 (790)
....+...++..+.+..+.|.. ....|+||++||.++.. ..|. .+. ..++++||.|+++|+||+|.+...
T Consensus 111 ~~~~~~~~~~~~l~~~~~~p~~-----~~~~~~Vl~lHG~~~~~---~~~~-~~a-~~L~~~Gy~V~~~D~rGhG~S~~~ 180 (395)
T PLN02652 111 ATSLFYGARRNALFCRSWAPAA-----GEMRGILIIIHGLNEHS---GRYL-HFA-KQLTSCGFGVYAMDWIGHGGSDGL 180 (395)
T ss_pred EEEEEECCCCCEEEEEEecCCC-----CCCceEEEEECCchHHH---HHHH-HHH-HHHHHCCCEEEEeCCCCCCCCCCC
Confidence 4456777788899999998863 33467999999987652 2222 233 334458999999999998865432
Q ss_pred hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC--CceEEEEEeCCCCCccccccc
Q psy463 551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS--NVFKCGISVAPVTDWIYYDTI 628 (790)
Q Consensus 551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~~v~~~~~~~~~~~~~~ 628 (790)
.. +........+|+.++++++....+ ..+++|+||||||.+++.++. +|. ..++++++.+|.........
T Consensus 181 ~~---~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~- 252 (395)
T PLN02652 181 HG---YVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHP- 252 (395)
T ss_pred CC---CCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchH-
Confidence 11 000111235677777887765322 358999999999999998765 553 36889999988754321100
Q ss_pred chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChh-hHHHHHHHHHhcCcchhcccccCCCCcCCc
Q psy463 629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQ-QSMMLAKSLQHADIMFQSQRYMGLPTFEDN 707 (790)
Q Consensus 629 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~-~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 707 (790)
..... .. ....+ .|.+.+.+......+.. +......... ++. .+.+.......
T Consensus 253 ~~~~~----------~~--------l~~~~--~p~~~~~~~~~~~~~~s~~~~~~~~~~~--dp~----~~~g~i~~~~~ 306 (395)
T PLN02652 253 IVGAV----------AP--------IFSLV--APRFQFKGANKRGIPVSRDPAALLAKYS--DPL----VYTGPIRVRTG 306 (395)
T ss_pred HHHHH----------HH--------HHHHh--CCCCcccCcccccCCcCCCHHHHHHHhc--CCC----cccCCchHHHH
Confidence 00000 00 00000 00000000000000000 0001111000 100 00000000000
Q ss_pred chhhhhh-hhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHH
Q psy463 708 LEGYKIA-ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERF 784 (790)
Q Consensus 708 ~~~~~~~-~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~f 784 (790)
....+.. .....+.++ ++|+|++||++|.++|++.++.+++.+... .+++++||+++|.+.. .++++++.+.+|
T Consensus 307 ~~~~~~~~~l~~~L~~I-~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~--~k~l~~~~ga~H~l~~e~~~e~v~~~I~~F 383 (395)
T PLN02652 307 HEILRISSYLTRNFKSV-TVPFMVLHGTADRVTDPLASQDLYNEAASR--HKDIKLYDGFLHDLLFEPEREEVGRDIIDW 383 (395)
T ss_pred HHHHHHHHHHHhhcccC-CCCEEEEEeCCCCCCCHHHHHHHHHhcCCC--CceEEEECCCeEEeccCCCHHHHHHHHHHH
Confidence 0000000 112456778 999999999999999999999999887653 3478889999999865 688999999999
Q ss_pred HHHhh
Q psy463 785 LDSCF 789 (790)
Q Consensus 785 l~~~l 789 (790)
|+.++
T Consensus 384 L~~~~ 388 (395)
T PLN02652 384 MEKRL 388 (395)
T ss_pred HHHHh
Confidence 99875
No 44
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.74 E-value=5e-17 Score=159.14 Aligned_cols=202 Identities=16% Similarity=0.148 Sum_probs=135.1
Q ss_pred EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC---ChhhhHhhhhcc-
Q psy463 483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL---KGNTLKYAGYRR- 558 (790)
Q Consensus 483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~---~g~~~~~~~~~~- 558 (790)
+.+++..|.+ .++.|.||++|+..|-. .+...+... ++++||.|++||+-+... ............
T Consensus 1 ~~ay~~~P~~-----~~~~~~Vvv~~d~~G~~----~~~~~~ad~-lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~ 70 (218)
T PF01738_consen 1 IDAYVARPEG-----GGPRPAVVVIHDIFGLN----PNIRDLADR-LAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMREL 70 (218)
T ss_dssp EEEEEEEETT-----SSSEEEEEEE-BTTBS-----HHHHHHHHH-HHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHC
T ss_pred CeEEEEeCCC-----CCCCCEEEEEcCCCCCc----hHHHHHHHH-HHhcCCCEEecccccCCCCCccchhhHHHHHHHH
Confidence 4678888974 36789999999977652 112223334 445899999999764333 111100111111
Q ss_pred ---CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcC
Q psy463 559 ---LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMG 635 (790)
Q Consensus 559 ---~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g 635 (790)
.......|+.++++++.+ .+.++..||+++|+|+||.+++.++... ..++++++..|.....
T Consensus 71 ~~~~~~~~~~~~~aa~~~l~~-~~~~~~~kig~vGfc~GG~~a~~~a~~~--~~~~a~v~~yg~~~~~------------ 135 (218)
T PF01738_consen 71 FAPRPEQVAADLQAAVDYLRA-QPEVDPGKIGVVGFCWGGKLALLLAARD--PRVDAAVSFYGGSPPP------------ 135 (218)
T ss_dssp HHHSHHHHHHHHHHHHHHHHC-TTTCEEEEEEEEEETHHHHHHHHHHCCT--TTSSEEEEES-SSSGG------------
T ss_pred HhhhHHHHHHHHHHHHHHHHh-ccccCCCcEEEEEEecchHHhhhhhhhc--cccceEEEEcCCCCCC------------
Confidence 112345777888999988 6667889999999999999999999865 3788888877710000
Q ss_pred CCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhh
Q psy463 636 LPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAA 715 (790)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (790)
.
T Consensus 136 ------------------------------------------------------~------------------------- 136 (218)
T PF01738_consen 136 ------------------------------------------------------P------------------------- 136 (218)
T ss_dssp ------------------------------------------------------G-------------------------
T ss_pred ------------------------------------------------------c-------------------------
Confidence 0
Q ss_pred hhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC---------cchHHHHHHHHHHH
Q psy463 716 LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG---------VRPHFYHTLERFLD 786 (790)
Q Consensus 716 ~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~---------~~~~~~~~i~~fl~ 786 (790)
+.....++ ++|+|+++|++|+.++.+....+.+.|++++.++++.+|||++|+|.. ..++.++.+.+||+
T Consensus 137 ~~~~~~~~-~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~ 215 (218)
T PF01738_consen 137 PLEDAPKI-KAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFK 215 (218)
T ss_dssp HHHHGGG---S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHC
T ss_pred chhhhccc-CCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHH
Confidence 00345567 899999999999999999999999999999999999999999999986 23467899999999
Q ss_pred Hhh
Q psy463 787 SCF 789 (790)
Q Consensus 787 ~~l 789 (790)
+||
T Consensus 216 ~~L 218 (218)
T PF01738_consen 216 RHL 218 (218)
T ss_dssp C--
T ss_pred hcC
Confidence 987
No 45
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.74 E-value=1e-16 Score=162.75 Aligned_cols=249 Identities=19% Similarity=0.134 Sum_probs=150.7
Q ss_pred ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463 469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG 548 (790)
Q Consensus 469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g 548 (790)
....++|.+.+|..|.|++++|.+ ..++.|+||.+||.++... .+. .. ..++..||+|+.+|.||.++..
T Consensus 55 ~vy~v~f~s~~g~~V~g~l~~P~~----~~~~~Pavv~~hGyg~~~~---~~~--~~-~~~a~~G~~vl~~d~rGqg~~~ 124 (320)
T PF05448_consen 55 EVYDVSFESFDGSRVYGWLYRPKN----AKGKLPAVVQFHGYGGRSG---DPF--DL-LPWAAAGYAVLAMDVRGQGGRS 124 (320)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEES-----SSSSEEEEEEE--TT--GG---GHH--HH-HHHHHTT-EEEEE--TTTSSSS
T ss_pred EEEEEEEEccCCCEEEEEEEecCC----CCCCcCEEEEecCCCCCCC---Ccc--cc-cccccCCeEEEEecCCCCCCCC
Confidence 356788888899999999999985 3578999999999876521 111 11 1234589999999999977422
Q ss_pred hhhHh------hhhccCCc----------cchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEE
Q psy463 549 NTLKY------AGYRRLGT----------VEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKC 612 (790)
Q Consensus 549 ~~~~~------~~~~~~~~----------~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~ 612 (790)
..... ..+...|. ..+.|+..+++++.+ ++.+|.+||+++|.|+||.+++.++..++ ++++
T Consensus 125 ~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~s-lpevD~~rI~v~G~SqGG~lal~~aaLd~--rv~~ 201 (320)
T PF05448_consen 125 PDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRS-LPEVDGKRIGVTGGSQGGGLALAAAALDP--RVKA 201 (320)
T ss_dssp -B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHT-STTEEEEEEEEEEETHHHHHHHHHHHHSS--T-SE
T ss_pred CCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHh-CCCcCcceEEEEeecCchHHHHHHHHhCc--cccE
Confidence 22110 00000111 236889999999998 89999999999999999999999999875 6888
Q ss_pred EEEeCCC-CCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCc
Q psy463 613 GISVAPV-TDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI 691 (790)
Q Consensus 613 ~v~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~ 691 (790)
+++..|. .++... +....-..+ ......|... . | .......+.++.|.-.+.
T Consensus 202 ~~~~vP~l~d~~~~---~~~~~~~~~--y~~~~~~~~~--------~------------d--~~~~~~~~v~~~L~Y~D~ 254 (320)
T PF05448_consen 202 AAADVPFLCDFRRA---LELRADEGP--YPEIRRYFRW--------R------------D--PHHEREPEVFETLSYFDA 254 (320)
T ss_dssp EEEESESSSSHHHH---HHHT--STT--THHHHHHHHH--------H------------S--CTHCHHHHHHHHHHTT-H
T ss_pred EEecCCCccchhhh---hhcCCcccc--HHHHHHHHhc--------c------------C--CCcccHHHHHHHHhhhhH
Confidence 8888774 343211 000000000 0000111100 0 0 011222334444444444
Q ss_pred chhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCC
Q psy463 692 MFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLI 771 (790)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~ 771 (790)
. +.+++| ++|+|+..|-.|.+||+......+..+.. ++++++||..+|...
T Consensus 255 ~-------------------------nfA~ri-~~pvl~~~gl~D~~cPP~t~fA~yN~i~~---~K~l~vyp~~~He~~ 305 (320)
T PF05448_consen 255 V-------------------------NFARRI-KCPVLFSVGLQDPVCPPSTQFAAYNAIPG---PKELVVYPEYGHEYG 305 (320)
T ss_dssp H-------------------------HHGGG---SEEEEEEETT-SSS-HHHHHHHHCC--S---SEEEEEETT--SSTT
T ss_pred H-------------------------HHHHHc-CCCEEEEEecCCCCCCchhHHHHHhccCC---CeeEEeccCcCCCch
Confidence 3 778899 99999999999999999999999998864 479999999999874
Q ss_pred CcchHHHHHHHHHHHHh
Q psy463 772 GVRPHFYHTLERFLDSC 788 (790)
Q Consensus 772 ~~~~~~~~~i~~fl~~~ 788 (790)
.....+...+||.+|
T Consensus 306 --~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 306 --PEFQEDKQLNFLKEH 320 (320)
T ss_dssp --HHHHHHHHHHHHHH-
T ss_pred --hhHHHHHHHHHHhcC
Confidence 233367888998875
No 46
>KOG1552|consensus
Probab=99.72 E-value=2.1e-16 Score=147.53 Aligned_cols=219 Identities=19% Similarity=0.192 Sum_probs=159.3
Q ss_pred ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463 469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG 548 (790)
Q Consensus 469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g 548 (790)
..+.+..+...|..+.+..+.|+. ...+++++.||..... . ....+...+....++.|+.+||+|.|.++
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~------~~~~~lly~hGNa~Dl--g--q~~~~~~~l~~~ln~nv~~~DYSGyG~S~ 103 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPE------AAHPTLLYSHGNAADL--G--QMVELFKELSIFLNCNVVSYDYSGYGRSS 103 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCcc------ccceEEEEcCCcccch--H--HHHHHHHHHhhcccceEEEEecccccccC
Confidence 455667777788899999998863 3458999999985442 1 11222333333458999999999987755
Q ss_pred hhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccccc
Q psy463 549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTI 628 (790)
Q Consensus 549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~ 628 (790)
..-.+. ..++|+.++.+||+++.+ ..++|+|+|+|+|...+..+|.+.| .+++|+.+|+.+.....
T Consensus 104 G~psE~-------n~y~Di~avye~Lr~~~g--~~~~Iil~G~SiGt~~tv~Lasr~~---~~alVL~SPf~S~~rv~-- 169 (258)
T KOG1552|consen 104 GKPSER-------NLYADIKAVYEWLRNRYG--SPERIILYGQSIGTVPTVDLASRYP---LAAVVLHSPFTSGMRVA-- 169 (258)
T ss_pred CCcccc-------cchhhHHHHHHHHHhhcC--CCceEEEEEecCCchhhhhHhhcCC---cceEEEeccchhhhhhh--
Confidence 442222 568999999999998554 5789999999999999999999886 78999999987653210
Q ss_pred chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcc
Q psy463 629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNL 708 (790)
Q Consensus 629 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 708 (790)
.+ ....+
T Consensus 170 -------~~----~~~~~-------------------------------------------------------------- 176 (258)
T KOG1552|consen 170 -------FP----DTKTT-------------------------------------------------------------- 176 (258)
T ss_pred -------cc----CcceE--------------------------------------------------------------
Confidence 00 00000
Q ss_pred hhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHh
Q psy463 709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSC 788 (790)
Q Consensus 709 ~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~ 788 (790)
-.+..+...+.+..+ ++|+|++||+.|+++++.++..|++.++++ ++..++.|+||.......++.+.+..|+..-
T Consensus 177 ~~~d~f~~i~kI~~i-~~PVLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~ 252 (258)
T KOG1552|consen 177 YCFDAFPNIEKISKI-TCPVLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVKGAGHNDIELYPEYIEHLRRFISSV 252 (258)
T ss_pred EeeccccccCcceec-cCCEEEEecccCceecccccHHHHHhcccc---CCCcEEecCCCcccccCHHHHHHHHHHHHHh
Confidence 000000112567778 999999999999999999999999999875 5777888999987766678888888888653
No 47
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.71 E-value=2.1e-16 Score=159.88 Aligned_cols=269 Identities=15% Similarity=0.096 Sum_probs=155.3
Q ss_pred EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463 471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT 550 (790)
Q Consensus 471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~ 550 (790)
....+...||..+.+..+.+.. .+..+||++||...... . .....+.+..+||.|+..|.||+|.+..
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~------~~~g~Vvl~HG~~Eh~~---r--y~~la~~l~~~G~~V~~~D~RGhG~S~r- 77 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPE------PPKGVVVLVHGLGEHSG---R--YEELADDLAARGFDVYALDLRGHGRSPR- 77 (298)
T ss_pred ccceeecCCCceEEEEeecCCC------CCCcEEEEecCchHHHH---H--HHHHHHHHHhCCCEEEEecCCCCCCCCC-
Confidence 3446667799999999998764 22279999999987632 2 2223345556999999999999988752
Q ss_pred hHhhhhccCCccchhHHHHHHHHHHHhCCC-cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc--ccc
Q psy463 551 LKYAGYRRLGTVEIYDQINVTRYLQENLPY-IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY--YDT 627 (790)
Q Consensus 551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~-~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~--~~~ 627 (790)
... +.. ..+++....++.+.+.... ....+++|+||||||.+++.++.+++ ..++++|+.+|+..... ...
T Consensus 78 -~~r--g~~--~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~-~~i~~~vLssP~~~l~~~~~~~ 151 (298)
T COG2267 78 -GQR--GHV--DSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYP-PRIDGLVLSSPALGLGGAILRL 151 (298)
T ss_pred -CCc--CCc--hhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCC-ccccEEEEECccccCChhHHHH
Confidence 000 111 1234444444443332110 22468999999999999999999888 59999999999877652 000
Q ss_pred cchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCcc---ChhhHHHHHHHHHhcCcchhcccccCCCCc
Q psy463 628 IYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNV---HFQQSMMLAKSLQHADIMFQSQRYMGLPTF 704 (790)
Q Consensus 628 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v---~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 704 (790)
.......... .++ .|-+.+......++ .........+........ ..+.+.
T Consensus 152 ~~~~~~~~~~------------------~~~--~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~-----~~~~~~- 205 (298)
T COG2267 152 ILARLALKLL------------------GRI--RPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLI-----GVGGPV- 205 (298)
T ss_pred HHHHHhcccc------------------ccc--ccccccCcccccCcCcchhhcCHHHHHHHhcCCcc-----ccCCcc-
Confidence 0000000000 000 00000000000000 000111111111111100 000000
Q ss_pred CCcchhhhhh------hhhhhhhccCCccEEEEecCCCcccc-hhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cc-
Q psy463 705 EDNLEGYKIA------ALNNKVDRIRDKQYLLVHGTMDDNVH-FQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VR- 774 (790)
Q Consensus 705 ~~~~~~~~~~------~~~~~~~~i~~~P~Lii~G~~D~~v~-~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~- 774 (790)
..++... .......++ ++|+|+++|+.|.+++ .+...++++.+.... +++++|||+.|.+.. +.
T Consensus 206 ---~~w~~~~~~a~~~~~~~~~~~~-~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~--~~~~~~~g~~He~~~E~~~~ 279 (298)
T COG2267 206 ---SRWVDLALLAGRVPALRDAPAI-ALPVLLLQGGDDRVVDNVEGLARFFERAGSPD--KELKVIPGAYHELLNEPDRA 279 (298)
T ss_pred ---HHHHHHHHHhhcccchhccccc-cCCEEEEecCCCccccCcHHHHHHHHhcCCCC--ceEEecCCcchhhhcCcchH
Confidence 0000000 011335566 8999999999999999 677777777665543 589999999999987 55
Q ss_pred -hHHHHHHHHHHHHhh
Q psy463 775 -PHFYHTLERFLDSCF 789 (790)
Q Consensus 775 -~~~~~~i~~fl~~~l 789 (790)
+++++.+.+||.+++
T Consensus 280 r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 280 REEVLKDILAWLAEAL 295 (298)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 899999999999875
No 48
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.70 E-value=3.1e-15 Score=157.30 Aligned_cols=234 Identities=15% Similarity=0.155 Sum_probs=164.1
Q ss_pred cEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCC
Q psy463 143 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP 222 (790)
Q Consensus 143 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 222 (790)
.+||+.|-++- ....++...+.+. ...|.+++.+ +.|++..... ..+||++++++++.
T Consensus 173 ~~l~~~D~dg~------~~~~l~~~~~~~~-~p~ws~~~~~-~~y~~f~~~~--------~~~i~~~~l~~g~~------ 230 (425)
T COG0823 173 YELALGDYDGY------NQQKLTDSGSLIL-TPAWSPDGKK-LAYVSFELGG--------CPRIYYLDLNTGKR------ 230 (425)
T ss_pred ceEEEEccCCc------ceeEecccCccee-ccccCcCCCc-eEEEEEecCC--------CceEEEEeccCCcc------
Confidence 38999988733 2444555544333 3466666655 5555432111 16899999999874
Q ss_pred ccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCce
Q psy463 223 VPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHL 302 (790)
Q Consensus 223 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~ 302 (790)
..+. ...+....|+|||||+.++++....+..+||++|+.++..++|+...+ ....|
T Consensus 231 ~~i~-----------------~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~g------i~~~P 287 (425)
T COG0823 231 PVIL-----------------NFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFG------INTSP 287 (425)
T ss_pred ceee-----------------ccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCc------cccCc
Confidence 2333 345666789999999955554433467789999999998887776543 24589
Q ss_pred eEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCc
Q psy463 303 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPI 382 (790)
Q Consensus 303 ~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 382 (790)
.|||||++|+|.. ++.| ..+||+++++++. .+++|.....-. .+.|||||++|+|.+..+.
T Consensus 288 s~spdG~~ivf~S----dr~G------~p~I~~~~~~g~~------~~riT~~~~~~~-~p~~SpdG~~i~~~~~~~g-- 348 (425)
T COG0823 288 SWSPDGSKIVFTS----DRGG------RPQIYLYDLEGSQ------VTRLTFSGGGNS-NPVWSPDGDKIVFESSSGG-- 348 (425)
T ss_pred cCCCCCCEEEEEe----CCCC------CcceEEECCCCCc------eeEeeccCCCCc-CccCCCCCCEEEEEeccCC--
Confidence 9999999999764 4788 7899999999988 788886543323 5899999999999985422
Q ss_pred eEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463 383 VQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL 449 (790)
Q Consensus 383 ~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~ 449 (790)
...+...++.+. ...++++. ......++++++|+.++|+....+-+.++..+..+...
T Consensus 349 ~~~i~~~~~~~~-~~~~~lt~--------~~~~e~ps~~~ng~~i~~~s~~~~~~~l~~~s~~g~~~ 406 (425)
T COG0823 349 QWDIDKNDLASG-GKIRILTS--------TYLNESPSWAPNGRMIMFSSGQGGGSVLSLVSLDGRVS 406 (425)
T ss_pred ceeeEEeccCCC-CcEEEccc--------cccCCCCCcCCCCceEEEeccCCCCceEEEeeccceeE
Confidence 267777777652 22555554 33455689999999999998777777777777766544
No 49
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.70 E-value=6.1e-16 Score=168.46 Aligned_cols=226 Identities=22% Similarity=0.281 Sum_probs=150.2
Q ss_pred CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEee
Q psy463 10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCS 89 (790)
Q Consensus 10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~ 89 (790)
...|.|||||++|||++...+...+|++.+.++. ...+... .
T Consensus 192 ~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~---------~~~~~~~-----~------------------------ 233 (417)
T TIGR02800 192 ILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQ---------REKVASF-----P------------------------ 233 (417)
T ss_pred eecccCCCCCCEEEEEEcCCCCcEEEEEECCCCC---------EEEeecC-----C------------------------
Confidence 4578899999999999887777788888887663 1111000 0
Q ss_pred CCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccce
Q psy463 90 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF 169 (790)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~ 169 (790)
+....|.|+|||+.|+|.....+ ..+||+++++++. ..+++.+..
T Consensus 234 -------------------~~~~~~~~spDg~~l~~~~~~~~----------~~~i~~~d~~~~~------~~~l~~~~~ 278 (417)
T TIGR02800 234 -------------------GMNGAPAFSPDGSKLAVSLSKDG----------NPDIYVMDLDGKQ------LTRLTNGPG 278 (417)
T ss_pred -------------------CCccceEECCCCCEEEEEECCCC----------CccEEEEECCCCC------EEECCCCCC
Confidence 00123689999999999865433 2389999998774 455655432
Q ss_pred EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEE
Q psy463 170 TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVL 249 (790)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~ 249 (790)
... -..|+++++. ++|.+.... ..+||++++++++ ..+++ ....+.
T Consensus 279 ~~~-~~~~s~dg~~-l~~~s~~~g---------~~~iy~~d~~~~~------~~~l~-----------------~~~~~~ 324 (417)
T TIGR02800 279 IDT-EPSWSPDGKS-IAFTSDRGG---------SPQIYMMDADGGE------VRRLT-----------------FRGGYN 324 (417)
T ss_pred CCC-CEEECCCCCE-EEEEECCCC---------CceEEEEECCCCC------EEEee-----------------cCCCCc
Confidence 221 2356666553 666654321 1589999998876 33444 334455
Q ss_pred EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463 250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS 329 (790)
Q Consensus 250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~ 329 (790)
..+.|||||+.+++..+..+..+|+++++.++..+.++.... ...|.|||||+.|++... ..+
T Consensus 325 ~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~-------~~~p~~spdg~~l~~~~~----~~~------ 387 (417)
T TIGR02800 325 ASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERVLTDTGL-------DESPSFAPNGRMILYATT----RGG------ 387 (417)
T ss_pred cCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEEccCCCC-------CCCceECCCCCEEEEEEe----CCC------
Confidence 678999999987777776666789999999987776654211 347899999999986554 455
Q ss_pred ccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeee
Q psy463 330 WDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWD 366 (790)
Q Consensus 330 ~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s 366 (790)
...|++++.+++. .+.++.....+.. +.|+
T Consensus 388 ~~~l~~~~~~g~~------~~~~~~~~g~~~~-~~ws 417 (417)
T TIGR02800 388 RGVLGLVSTDGRF------RARLPLGNGDVRE-PAWS 417 (417)
T ss_pred cEEEEEEECCCce------eeECCCCCCCcCC-CCCC
Confidence 5688988877765 6666654333333 5563
No 50
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.68 E-value=2.6e-15 Score=146.12 Aligned_cols=212 Identities=18% Similarity=0.148 Sum_probs=156.5
Q ss_pred EEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhh
Q psy463 472 YMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTL 551 (790)
Q Consensus 472 ~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~ 551 (790)
.+++..+| .++.+++..|.+ ..+.|+||++|+..+.. +. ..-....++..||.|++||+-+..+.....
T Consensus 4 ~v~~~~~~-~~~~~~~a~P~~-----~~~~P~VIv~hei~Gl~---~~--i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~ 72 (236)
T COG0412 4 DVTIPAPD-GELPAYLARPAG-----AGGFPGVIVLHEIFGLN---PH--IRDVARRLAKAGYVVLAPDLYGRQGDPTDI 72 (236)
T ss_pred ceEeeCCC-ceEeEEEecCCc-----CCCCCEEEEEecccCCc---hH--HHHHHHHHHhCCcEEEechhhccCCCCCcc
Confidence 45666655 889999999985 34449999999977752 21 222334455689999999976522211111
Q ss_pred H----hhhh----ccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc
Q psy463 552 K----YAGY----RRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI 623 (790)
Q Consensus 552 ~----~~~~----~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~ 623 (790)
. .... .........|+.+++++|.+ ++.++..||+++|+||||.+++.++.+.| .++++++..|..-.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~-~~~~~~~~ig~~GfC~GG~~a~~~a~~~~--~v~a~v~fyg~~~~- 148 (236)
T COG0412 73 EDEPAELETGLVERVDPAEVLADIDAALDYLAR-QPQVDPKRIGVVGFCMGGGLALLAATRAP--EVKAAVAFYGGLIA- 148 (236)
T ss_pred cccHHHHhhhhhccCCHHHHHHHHHHHHHHHHh-CCCCCCceEEEEEEcccHHHHHHhhcccC--CccEEEEecCCCCC-
Confidence 1 0000 11114568899999999998 77789999999999999999999999655 78888887763110
Q ss_pred cccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCC
Q psy463 624 YYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPT 703 (790)
Q Consensus 624 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 703 (790)
...
T Consensus 149 ------------------------------------------------------------------~~~----------- 151 (236)
T COG0412 149 ------------------------------------------------------------------DDT----------- 151 (236)
T ss_pred ------------------------------------------------------------------Ccc-----------
Confidence 000
Q ss_pred cCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-----------
Q psy463 704 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG----------- 772 (790)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~----------- 772 (790)
....++ ++|+|+.+|+.|..+|......+.+++.++++.+++.+|+++.|.|..
T Consensus 152 --------------~~~~~~-~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~ 216 (236)
T COG0412 152 --------------ADAPKI-KVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDA 216 (236)
T ss_pred --------------cccccc-cCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCH
Confidence 123456 899999999999999999999999999999888999999999999883
Q ss_pred -cchHHHHHHHHHHHHhhC
Q psy463 773 -VRPHFYHTLERFLDSCFA 790 (790)
Q Consensus 773 -~~~~~~~~i~~fl~~~l~ 790 (790)
..+..++.+.+||+++|.
T Consensus 217 ~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 217 AAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 234678999999998863
No 51
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.68 E-value=1.2e-15 Score=141.40 Aligned_cols=244 Identities=19% Similarity=0.132 Sum_probs=159.0
Q ss_pred ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463 469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG 548 (790)
Q Consensus 469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g 548 (790)
++..++|++.+|.+|.||+.+|.. .+++.|+||..||..+... .|. .+. .++..||+|+.+|.||-+++.
T Consensus 55 e~ydvTf~g~~g~rI~gwlvlP~~----~~~~~P~vV~fhGY~g~~g---~~~-~~l--~wa~~Gyavf~MdvRGQg~~~ 124 (321)
T COG3458 55 EVYDVTFTGYGGARIKGWLVLPRH----EKGKLPAVVQFHGYGGRGG---EWH-DML--HWAVAGYAVFVMDVRGQGSSS 124 (321)
T ss_pred EEEEEEEeccCCceEEEEEEeecc----cCCccceEEEEeeccCCCC---Ccc-ccc--cccccceeEEEEecccCCCcc
Confidence 355678899899999999999986 4478999999999877632 121 111 123479999999999976652
Q ss_pred hhhHhhhhc-------cCCc----------cchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceE
Q psy463 549 NTLKYAGYR-------RLGT----------VEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFK 611 (790)
Q Consensus 549 ~~~~~~~~~-------~~~~----------~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~ 611 (790)
.+-.....+ ..|. ..+.|...+++-+.+ ++.+|..||++.|.|.||.+++.++...| +++
T Consensus 125 ~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~s-l~~vde~Ri~v~G~SqGGglalaaaal~~--rik 201 (321)
T COG3458 125 QDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILAS-LDEVDEERIGVTGGSQGGGLALAAAALDP--RIK 201 (321)
T ss_pred ccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhc-cCccchhheEEeccccCchhhhhhhhcCh--hhh
Confidence 210010000 0011 236788899999888 89999999999999999999999998775 888
Q ss_pred EEEEeCCCCC-cccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcC
Q psy463 612 CGISVAPVTD-WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD 690 (790)
Q Consensus 612 ~~v~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~ 690 (790)
++++..|... +.. .+..+ ....|.+. ...++ .| -..-.+.++.|.-.+
T Consensus 202 ~~~~~~Pfl~df~r--------~i~~~----~~~~ydei-----~~y~k------~h--------~~~e~~v~~TL~yfD 250 (321)
T COG3458 202 AVVADYPFLSDFPR--------AIELA----TEGPYDEI-----QTYFK------RH--------DPKEAEVFETLSYFD 250 (321)
T ss_pred cccccccccccchh--------heeec----ccCcHHHH-----HHHHH------hc--------CchHHHHHHHHhhhh
Confidence 8888888532 211 00000 00111110 00000 00 001122333333333
Q ss_pred cchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcC
Q psy463 691 IMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGL 770 (790)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~ 770 (790)
.. +.+.++ +.|+|+..|-.|++||+...-.++.++... +...+||.-+|.-
T Consensus 251 ~~-------------------------n~A~Ri-K~pvL~svgL~D~vcpPstqFA~yN~l~~~---K~i~iy~~~aHe~ 301 (321)
T COG3458 251 IV-------------------------NLAARI-KVPVLMSVGLMDPVCPPSTQFAAYNALTTS---KTIEIYPYFAHEG 301 (321)
T ss_pred hh-------------------------hHHHhh-ccceEEeecccCCCCCChhhHHHhhcccCC---ceEEEeecccccc
Confidence 33 667888 999999999999999999999999988754 4677888878976
Q ss_pred CCcchHHHHHHHHHHHH
Q psy463 771 IGVRPHFYHTLERFLDS 787 (790)
Q Consensus 771 ~~~~~~~~~~i~~fl~~ 787 (790)
.. ....+.+..|+..
T Consensus 302 ~p--~~~~~~~~~~l~~ 316 (321)
T COG3458 302 GP--GFQSRQQVHFLKI 316 (321)
T ss_pred Cc--chhHHHHHHHHHh
Confidence 53 2333445556554
No 52
>PLN02511 hydrolase
Probab=99.67 E-value=1.8e-15 Score=160.53 Aligned_cols=281 Identities=14% Similarity=0.065 Sum_probs=155.0
Q ss_pred eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463 470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN 549 (790)
Q Consensus 470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~ 549 (790)
.+...+...||..+....+.+.... .....|+||++||..++.. ..|...+...++ ++||.|+++|+||+|++..
T Consensus 71 ~~re~l~~~DG~~~~ldw~~~~~~~--~~~~~p~vvllHG~~g~s~--~~y~~~~~~~~~-~~g~~vv~~d~rG~G~s~~ 145 (388)
T PLN02511 71 YRRECLRTPDGGAVALDWVSGDDRA--LPADAPVLILLPGLTGGSD--DSYVRHMLLRAR-SKGWRVVVFNSRGCADSPV 145 (388)
T ss_pred eeEEEEECCCCCEEEEEecCccccc--CCCCCCEEEEECCCCCCCC--CHHHHHHHHHHH-HCCCEEEEEecCCCCCCCC
Confidence 3445677789988876544332111 2234689999999877632 223222333344 4899999999999886532
Q ss_pred hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC-ceEEEEEeCCCCCccccccc
Q psy463 550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN-VFKCGISVAPVTDWIYYDTI 628 (790)
Q Consensus 550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~-~~~~~v~~~~~~~~~~~~~~ 628 (790)
. ....+.....+|+.++++++..+++ ..++.++||||||.+++.++.++++. .+++++++++..+.......
T Consensus 146 ~----~~~~~~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~ 218 (388)
T PLN02511 146 T----TPQFYSASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADED 218 (388)
T ss_pred C----CcCEEcCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHH
Confidence 1 0111222457899999999987444 46899999999999999999988863 26666666655443110000
Q ss_pred chhhhcCCCCccCchhhhhhccccchhhhccCC-cEEE--EeecCCCc-cChhhHH-HHHHHHHhcCcchhcccccCCCC
Q psy463 629 YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDK-QYLL--VHGTMDDN-VHFQQSM-MLAKSLQHADIMFQSQRYMGLPT 703 (790)
Q Consensus 629 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-p~l~--~~g~~d~~-v~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~ 703 (790)
+...+ ...|...-... ..++... ..++ +.+..+.. +...... ++-+.+.. ....
T Consensus 219 ~~~~~---------~~~y~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~-----------~~~g 277 (388)
T PLN02511 219 FHKGF---------NNVYDKALAKA-LRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTR-----------VSFG 277 (388)
T ss_pred HhccH---------HHHHHHHHHHH-HHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhh-----------hcCC
Confidence 00000 00010000000 0000000 0000 00000000 0000000 00000000 0011
Q ss_pred cCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhh-HHHHHHHHhcCCceEEEEcCCCCCcCCC-cchH-----
Q psy463 704 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQS-MMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPH----- 776 (790)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~-~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~----- 776 (790)
+.....+|...+....+.+| ++|+|+|+|.+|+++|.... ..+.+. ...+++++++++||..+. .+..
T Consensus 278 f~~~~~yy~~~s~~~~L~~I-~vPtLiI~g~dDpi~p~~~~~~~~~~~----~p~~~l~~~~~gGH~~~~E~p~~~~~~~ 352 (388)
T PLN02511 278 FKSVDAYYSNSSSSDSIKHV-RVPLLCIQAANDPIAPARGIPREDIKA----NPNCLLIVTPSGGHLGWVAGPEAPFGAP 352 (388)
T ss_pred CCCHHHHHHHcCchhhhccC-CCCeEEEEcCCCCcCCcccCcHhHHhc----CCCEEEEECCCcceeccccCCCCCCCCc
Confidence 23334456667777889999 99999999999999997654 233332 234689999999998765 3332
Q ss_pred -HHHHHHHHHHHh
Q psy463 777 -FYHTLERFLDSC 788 (790)
Q Consensus 777 -~~~~i~~fl~~~ 788 (790)
+.+.+.+||+..
T Consensus 353 w~~~~i~~Fl~~~ 365 (388)
T PLN02511 353 WTDPVVMEFLEAL 365 (388)
T ss_pred cHHHHHHHHHHHH
Confidence 468888998765
No 53
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.66 E-value=1e-14 Score=165.28 Aligned_cols=234 Identities=19% Similarity=0.173 Sum_probs=146.7
Q ss_pred HHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHh-CCCcC------------CCceEEEEech
Q psy463 527 YLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQEN-LPYID------------KTRTAIWGWSY 593 (790)
Q Consensus 527 ~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~~d------------~~ri~i~G~S~ 593 (790)
.+++.+||+|+.+|.||.++++..+. .++..+.+|..++|+|+..+ ..++| ..||+++|.||
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~-----~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPT-----TGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCc-----cCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 44555899999999999987665432 23346789999999999852 11223 36999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCc
Q psy463 594 GGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN 673 (790)
Q Consensus 594 GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~ 673 (790)
||++++.+|...|+ .++++|..+++++|..+. +....+..+ ..|...........+... . ...+ +..
T Consensus 348 ~G~~~~~aAa~~pp-~LkAIVp~a~is~~yd~y--r~~G~~~~~------~g~~ged~d~l~~~~~~r-~-~~~~--~~~ 414 (767)
T PRK05371 348 LGTLPNAVATTGVE-GLETIIPEAAISSWYDYY--RENGLVRAP------GGYQGEDLDVLAELTYSR-N-LLAG--DYL 414 (767)
T ss_pred HHHHHHHHHhhCCC-cceEEEeeCCCCcHHHHh--hcCCceecc------CCcCCcchhhHHHHhhhc-c-cCcc--hhh
Confidence 99999999887765 899999999998874321 110000000 011000000000000000 0 0000 000
Q ss_pred cChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHh
Q psy463 674 VHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQH 753 (790)
Q Consensus 674 v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~ 753 (790)
............+... .. ..-......|...++...++++ ++|+|++||..|.++++.++.+++++|++
T Consensus 415 ~~~~~~~~~~~~~~~~---------~~-~~~~~y~~fW~~rn~~~~~~kI-kvPvLlIhGw~D~~V~~~~s~~ly~aL~~ 483 (767)
T PRK05371 415 RHNEACEKLLAELTAA---------QD-RKTGDYNDFWDDRNYLKDADKI-KASVLVVHGLNDWNVKPKQVYQWWDALPE 483 (767)
T ss_pred cchHHHHHHHhhhhhh---------hh-hcCCCccHHHHhCCHhhHhhCC-CCCEEEEeeCCCCCCChHHHHHHHHHHHh
Confidence 0000000000000000 00 0001223567777888899999 99999999999999999999999999999
Q ss_pred cCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHhhC
Q psy463 754 ADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSCFA 790 (790)
Q Consensus 754 ~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~l~ 790 (790)
++++.++++.++ +|.... .+.++.+.+.+||+++|+
T Consensus 484 ~g~pkkL~l~~g-~H~~~~~~~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 484 NGVPKKLFLHQG-GHVYPNNWQSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred cCCCeEEEEeCC-CccCCCchhHHHHHHHHHHHHHhccc
Confidence 998889877766 786544 566888999999999874
No 54
>PRK10985 putative hydrolase; Provisional
Probab=99.66 E-value=6.5e-15 Score=153.24 Aligned_cols=274 Identities=15% Similarity=0.135 Sum_probs=153.3
Q ss_pred EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463 471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT 550 (790)
Q Consensus 471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~ 550 (790)
+...++..||..+......... .....|+||++||.+++.. ..+...+.. .+.++||.|+++|+||+++....
T Consensus 32 ~~~~~~~~dg~~~~l~w~~~~~----~~~~~p~vll~HG~~g~~~--~~~~~~~~~-~l~~~G~~v~~~d~rG~g~~~~~ 104 (324)
T PRK10985 32 YWQRLELPDGDFVDLAWSEDPA----QARHKPRLVLFHGLEGSFN--SPYAHGLLE-AAQKRGWLGVVMHFRGCSGEPNR 104 (324)
T ss_pred ceeEEECCCCCEEEEecCCCCc----cCCCCCEEEEeCCCCCCCc--CHHHHHHHH-HHHHCCCEEEEEeCCCCCCCccC
Confidence 3345677788776544322111 2335689999999987521 122222333 34458999999999998754321
Q ss_pred hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC-ceEEEEEeCCCCCcccccccc
Q psy463 551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN-VFKCGISVAPVTDWIYYDTIY 629 (790)
Q Consensus 551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~-~~~~~v~~~~~~~~~~~~~~~ 629 (790)
... .+......|+..+++++.++++ ..+++++||||||.+++.++..++.+ .+++++++++..++..-....
T Consensus 105 ~~~----~~~~~~~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~ 177 (324)
T PRK10985 105 LHR----IYHSGETEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRM 177 (324)
T ss_pred Ccc----eECCCchHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHH
Confidence 111 1112347899999999987443 46899999999999888777766543 377777777765543211000
Q ss_pred hhhhcCCCCccCchhhhhhc---cccchh-hhccCCcEEEEeecCCCccChhhH-----HHHHHHHHhcCcchhcccccC
Q psy463 630 SERYMGLPTFEDNLEGYKIA---ALNNKV-DRIRDKQYLLVHGTMDDNVHFQQS-----MMLAKSLQHADIMFQSQRYMG 700 (790)
Q Consensus 630 ~~~~~g~~~~~~~~~~~~~~---~~~~~~-~~~~~~p~l~~~g~~d~~v~~~~~-----~~l~~~l~~~~~~~~~~~~~~ 700 (790)
...+ ...|... .+...+ ..+. ...+.. ....... ...++.+.. ..
T Consensus 178 ~~~~---------~~~~~~~l~~~l~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~fd~~~~----------~~ 231 (324)
T PRK10985 178 EQGF---------SRVYQRYLLNLLKANAARKLA-----AYPGTL--PINLAQLKSVRRLREFDDLIT----------AR 231 (324)
T ss_pred hhhH---------HHHHHHHHHHHHHHHHHHHHH-----hccccc--cCCHHHHhcCCcHHHHhhhhe----------ec
Confidence 0000 0001100 000000 0000 001110 0011000 011111110 01
Q ss_pred CCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--c---c-
Q psy463 701 LPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--V---R- 774 (790)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~---~- 774 (790)
...+.....+|...+....++++ ++|+|+|+|+.|++++.+....+.+.. ..+++++++++||.... . .
T Consensus 232 ~~g~~~~~~~y~~~~~~~~l~~i-~~P~lii~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~GH~~~~~g~~~~~~ 306 (324)
T PRK10985 232 IHGFADAIDYYRQCSALPLLNQI-RKPTLIIHAKDDPFMTHEVIPKPESLP----PNVEYQLTEHGGHVGFVGGTLLKPQ 306 (324)
T ss_pred cCCCCCHHHHHHHCChHHHHhCC-CCCEEEEecCCCCCCChhhChHHHHhC----CCeEEEECCCCCceeeCCCCCCCCC
Confidence 11234455667677777888999 999999999999999987776654332 24688899999997654 1 1
Q ss_pred hHHHHHHHHHHHHhh
Q psy463 775 PHFYHTLERFLDSCF 789 (790)
Q Consensus 775 ~~~~~~i~~fl~~~l 789 (790)
.-..+.+.+||+..+
T Consensus 307 ~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 307 MWLEQRIPDWLTTYL 321 (324)
T ss_pred ccHHHHHHHHHHHhh
Confidence 234477788887654
No 55
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.65 E-value=4.2e-15 Score=152.72 Aligned_cols=244 Identities=14% Similarity=0.062 Sum_probs=129.1
Q ss_pred cEEEEEcCCCCccccccccccch--HHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463 502 PLLIHVYGGPSSFQVTERFSVDW--NLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP 579 (790)
Q Consensus 502 p~vv~~HG~~~~~~~~~~~~~~~--~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 579 (790)
|.||++||.+.+. ..|...+ ...++ +.||.|+++|+||+|.+...... ........+| +..+++.
T Consensus 31 ~~ivllHG~~~~~---~~~~~~~~~~~~l~-~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~----l~~~l~~-- 97 (282)
T TIGR03343 31 EAVIMLHGGGPGA---GGWSNYYRNIGPFV-DAGYRVILKDSPGFNKSDAVVMD---EQRGLVNARA----VKGLMDA-- 97 (282)
T ss_pred CeEEEECCCCCch---hhHHHHHHHHHHHH-hCCCEEEEECCCCCCCCCCCcCc---ccccchhHHH----HHHHHHH--
Confidence 6799999987652 2333211 22333 46899999999998765432100 0000011223 3333332
Q ss_pred CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccch----hhhcCCCCccCchhhhhhccccchh
Q psy463 580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYS----ERYMGLPTFEDNLEGYKIAALNNKV 655 (790)
Q Consensus 580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~ 655 (790)
++.++++++||||||.+++.++.++|. +++++++.+|............ ..++.... ......+..
T Consensus 98 -l~~~~~~lvG~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------- 167 (282)
T TIGR03343 98 -LDIEKAHLVGNSMGGATALNFALEYPD-RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYA-EPSYETLKQ------- 167 (282)
T ss_pred -cCCCCeeEEEECchHHHHHHHHHhChH-hhceEEEECCCCCCccccccCchHHHHHHHHHhc-CCCHHHHHH-------
Confidence 446799999999999999999998875 8888888877532110000000 00000000 000000000
Q ss_pred hhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCC
Q psy463 656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTM 735 (790)
Q Consensus 656 ~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~ 735 (790)
.+. .... ................+.. ... ....+... .....+........++++ ++|+|+++|++
T Consensus 168 -~~~---~~~~---~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~----~~~~~~~~~~~~~~l~~i-~~Pvlli~G~~ 233 (282)
T TIGR03343 168 -MLN---VFLF---DQSLITEELLQGRWENIQR-QPE-HLKNFLIS----SQKAPLSTWDVTARLGEI-KAKTLVTWGRD 233 (282)
T ss_pred -HHh---hCcc---CcccCcHHHHHhHHHHhhc-CHH-HHHHHHHh----ccccccccchHHHHHhhC-CCCEEEEEccC
Confidence 000 0000 0000000000000000000 000 00000000 000000111122457788 99999999999
Q ss_pred CcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463 736 DDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD 786 (790)
Q Consensus 736 D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~ 786 (790)
|..++++.++++++.++. ++++++|++||.+.. .++.+.+.+.+||+
T Consensus 234 D~~v~~~~~~~~~~~~~~----~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 234 DRFVPLDHGLKLLWNMPD----AQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CCcCCchhHHHHHHhCCC----CEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 999999999998887764 488999999999988 88999999999986
No 56
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.65 E-value=3.3e-15 Score=151.23 Aligned_cols=243 Identities=17% Similarity=0.148 Sum_probs=133.7
Q ss_pred CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463 499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL 578 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 578 (790)
.+.|+||++||.+++. ..|. .....+. .+|.|+++|+||+|.+..... ....+++....+..++++
T Consensus 11 ~~~~~iv~lhG~~~~~---~~~~--~~~~~l~-~~~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~~~i~~- 76 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSG---SYWA--PQLDVLT-QRFHVVTYDHRGTGRSPGELP-------PGYSIAHMADDVLQLLDA- 76 (257)
T ss_pred CCCCEEEEEcCCCcch---hHHH--HHHHHHH-hccEEEEEcCCCCCCCCCCCc-------ccCCHHHHHHHHHHHHHH-
Confidence 3458899999998762 2332 1223444 589999999999887543211 113355555555555542
Q ss_pred CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc-ccchh--hhcCCCCccCchhhhhhccccchh
Q psy463 579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD-TIYSE--RYMGLPTFEDNLEGYKIAALNNKV 655 (790)
Q Consensus 579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~-~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~ 655 (790)
++..++.++||||||.+++.++.++|+ .+++++.+++........ ..+.. .++... ....+...
T Consensus 77 --~~~~~~~l~G~S~Gg~~a~~~a~~~~~-~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------ 143 (257)
T TIGR03611 77 --LNIERFHFVGHALGGLIGLQLALRYPE-RLLSLVLINAWSRPDPHTRRCFDVRIALLQHA----GPEAYVHA------ 143 (257)
T ss_pred --hCCCcEEEEEechhHHHHHHHHHHChH-HhHHheeecCCCCCChhHHHHHHHHHHHHhcc----Ccchhhhh------
Confidence 345789999999999999999998875 788888877754321100 00000 000000 00000000
Q ss_pred hhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCC
Q psy463 656 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTM 735 (790)
Q Consensus 656 ~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~ 735 (790)
. ...+...-..+.... .+...... ....+.....................++++ ++|+|+++|++
T Consensus 144 --~--~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~ 208 (257)
T TIGR03611 144 --Q--ALFLYPADWISENAA---------RLAADEAH-ALAHFPGKANVLRRINALEAFDVSARLDRI-QHPVLLIANRD 208 (257)
T ss_pred --h--hhhhccccHhhccch---------hhhhhhhh-cccccCccHHHHHHHHHHHcCCcHHHhccc-CccEEEEecCc
Confidence 0 000000000000000 00000000 000000000000000001111222557788 99999999999
Q ss_pred CcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463 736 DDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS 787 (790)
Q Consensus 736 D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~ 787 (790)
|..+|++.++.+++.++. .+++.++++||.+.. +++++.+.+.+||++
T Consensus 209 D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 209 DMLVPYTQSLRLAAALPN----AQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred CcccCHHHHHHHHHhcCC----ceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 999999999988887654 378889999999887 888999999999863
No 57
>KOG4391|consensus
Probab=99.64 E-value=1.6e-15 Score=135.14 Aligned_cols=229 Identities=15% Similarity=0.139 Sum_probs=157.1
Q ss_pred eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463 470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN 549 (790)
Q Consensus 470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~ 549 (790)
-+.+++.++|..+++++++.-+ ...|+++++|+..|... .......-+....+..|+.++|||-|.+..
T Consensus 54 ye~i~l~T~D~vtL~a~~~~~E-------~S~pTlLyfh~NAGNmG----hr~~i~~~fy~~l~mnv~ivsYRGYG~S~G 122 (300)
T KOG4391|consen 54 YERIELRTRDKVTLDAYLMLSE-------SSRPTLLYFHANAGNMG----HRLPIARVFYVNLKMNVLIVSYRGYGKSEG 122 (300)
T ss_pred ceEEEEEcCcceeEeeeeeccc-------CCCceEEEEccCCCccc----chhhHHHHHHHHcCceEEEEEeeccccCCC
Confidence 4678888999999999998732 25699999999887632 111222334445789999999999665433
Q ss_pred hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccc
Q psy463 550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIY 629 (790)
Q Consensus 550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~ 629 (790)
.-.+. ....|..++++++.. .+..|..|++++|.|.||.+|..+|.... +++.|++.-............+
T Consensus 123 spsE~-------GL~lDs~avldyl~t-~~~~dktkivlfGrSlGGAvai~lask~~-~ri~~~ivENTF~SIp~~~i~~ 193 (300)
T KOG4391|consen 123 SPSEE-------GLKLDSEAVLDYLMT-RPDLDKTKIVLFGRSLGGAVAIHLASKNS-DRISAIIVENTFLSIPHMAIPL 193 (300)
T ss_pred Ccccc-------ceeccHHHHHHHHhc-CccCCcceEEEEecccCCeeEEEeeccch-hheeeeeeechhccchhhhhhe
Confidence 21111 235788889999998 78899999999999999999999988654 4788888776654432100000
Q ss_pred hhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcch
Q psy463 630 SERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLE 709 (790)
Q Consensus 630 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 709 (790)
...+ +..|. .. .+.+ +
T Consensus 194 v~p~---------~~k~i--------~~-----------------------lc~k-----n------------------- 209 (300)
T KOG4391|consen 194 VFPF---------PMKYI--------PL-----------------------LCYK-----N------------------- 209 (300)
T ss_pred eccc---------hhhHH--------HH-----------------------HHHH-----h-------------------
Confidence 0000 00000 00 0000 0
Q ss_pred hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHh
Q psy463 710 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSC 788 (790)
Q Consensus 710 ~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~ 788 (790)
.+.-...+..- +.|.|++.|.+|..||+.+.+++++.+.... .++..||++.|.-..-.+.+++.+.+||...
T Consensus 210 ---~~~S~~ki~~~-~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~--Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~ 282 (300)
T KOG4391|consen 210 ---KWLSYRKIGQC-RMPFLFISGLKDELVPPVMMRQLYELCPSRT--KRLAEFPDGTHNDTWICDGYFQAIEDFLAEV 282 (300)
T ss_pred ---hhcchhhhccc-cCceEEeecCccccCCcHHHHHHHHhCchhh--hhheeCCCCccCceEEeccHHHHHHHHHHHh
Confidence 00000223333 8999999999999999999999999988764 4889999999977655678999999999753
No 58
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.63 E-value=2.9e-14 Score=147.60 Aligned_cols=253 Identities=14% Similarity=0.023 Sum_probs=131.3
Q ss_pred ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463 501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY 580 (790)
Q Consensus 501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 580 (790)
.|.||++||.+... ..|. .....+++.||.|+++|+||+|.+..... .....+++..+.+..++++
T Consensus 46 ~~~lvliHG~~~~~---~~w~--~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~------~~~~~~~~~a~~l~~~l~~--- 111 (302)
T PRK00870 46 GPPVLLLHGEPSWS---YLYR--KMIPILAAAGHRVIAPDLIGFGRSDKPTR------REDYTYARHVEWMRSWFEQ--- 111 (302)
T ss_pred CCEEEEECCCCCch---hhHH--HHHHHHHhCCCEEEEECCCCCCCCCCCCC------cccCCHHHHHHHHHHHHHH---
Confidence 46899999987652 2333 22234555799999999999886532200 0112345555555555553
Q ss_pred cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc-ccchhhhcCCCCccCchhhhhhccccchhhhcc
Q psy463 581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD-TIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR 659 (790)
Q Consensus 581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 659 (790)
++.+++.++||||||.++..++.++|. .++++++.++........ ......+.... ...+.. .+....
T Consensus 112 l~~~~v~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--------~~~~~~ 180 (302)
T PRK00870 112 LDLTDVTLVCQDWGGLIGLRLAAEHPD-RFARLVVANTGLPTGDGPMPDAFWAWRAFS--QYSPVL--------PVGRLV 180 (302)
T ss_pred cCCCCEEEEEEChHHHHHHHHHHhChh-heeEEEEeCCCCCCccccchHHHhhhhccc--ccCchh--------hHHHHh
Confidence 345789999999999999999998886 788887777532110000 00000000000 000000 000000
Q ss_pred CCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCC-CCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463 660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGL-PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN 738 (790)
Q Consensus 660 ~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~ 738 (790)
...............+...............+... ..................+.++ ++|+|+|+|++|..
T Consensus 181 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~~D~~ 252 (302)
T PRK00870 181 -------NGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERW-DKPFLTAFSDSDPI 252 (302)
T ss_pred -------hccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcC-CCceEEEecCCCCc
Confidence 00000000000000000000000000000000000 0000000000011122456788 99999999999999
Q ss_pred cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463 739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC 788 (790)
Q Consensus 739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~ 788 (790)
+|... ..+.+.+.... .+.+.++++++|.+.. .++.+.+.+.+||+++
T Consensus 253 ~~~~~-~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 253 TGGGD-AILQKRIPGAA-GQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred ccCch-HHHHhhccccc-ccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 99765 77777766431 1247799999999987 8899999999999865
No 59
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.62 E-value=1.4e-14 Score=140.77 Aligned_cols=125 Identities=22% Similarity=0.286 Sum_probs=88.8
Q ss_pred EEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc--cchHHHHHhcCCeEEEEEcCCCCCCChhh--hHhhhhccCC
Q psy463 485 VKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS--VDWNLYLADNKDIVVAYIDGRNSALKGNT--LKYAGYRRLG 560 (790)
Q Consensus 485 ~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~--~~~~~~~~~~~G~~v~~~d~rG~~~~g~~--~~~~~~~~~~ 560 (790)
+++|.|++. .+++|+||++||+++... .+. ..+ ..++.+.||+|++||++|++..+.. |........+
T Consensus 1 ~~ly~P~~~----~~~~P~vv~lHG~~~~~~---~~~~~~~~-~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~ 72 (212)
T TIGR01840 1 MYVYVPAGL----TGPRALVLALHGCGQTAS---AYVIDWGW-KAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARG 72 (212)
T ss_pred CEEEcCCCC----CCCCCEEEEeCCCCCCHH---HHhhhcCh-HHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCC
Confidence 367889873 357899999999887522 221 112 3455568999999999987643221 1111111223
Q ss_pred ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463 561 TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV 619 (790)
Q Consensus 561 ~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~ 619 (790)
.....|+...++++.+++ .+|.+||+|+|+|+||.+++.++.++|+ .++++++.++.
T Consensus 73 ~~~~~~~~~~i~~~~~~~-~id~~~i~l~G~S~Gg~~a~~~a~~~p~-~~~~~~~~~g~ 129 (212)
T TIGR01840 73 TGEVESLHQLIDAVKANY-SIDPNRVYVTGLSAGGGMTAVLGCTYPD-VFAGGASNAGL 129 (212)
T ss_pred CccHHHHHHHHHHHHHhc-CcChhheEEEEECHHHHHHHHHHHhCch-hheEEEeecCC
Confidence 346778888999988744 4899999999999999999999998885 88888887775
No 60
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=99.62 E-value=3.9e-13 Score=134.79 Aligned_cols=262 Identities=16% Similarity=0.192 Sum_probs=140.2
Q ss_pred CccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecc
Q psy463 112 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHN 191 (790)
Q Consensus 112 ~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (790)
.++.|.+||++|+|.+..++ -++||++||++++ ..|||.++.....-.-+.++++ .+||+...
T Consensus 39 ~~~~ft~dG~kllF~s~~dg----------~~nly~lDL~t~~------i~QLTdg~g~~~~g~~~s~~~~-~~~Yv~~~ 101 (386)
T PF14583_consen 39 YQNCFTDDGRKLLFASDFDG----------NRNLYLLDLATGE------ITQLTDGPGDNTFGGFLSPDDR-ALYYVKNG 101 (386)
T ss_dssp TS--B-TTS-EEEEEE-TTS----------S-EEEEEETTT-E------EEE---SS-B-TTT-EE-TTSS-EEEEEETT
T ss_pred cCCCcCCCCCEEEEEeccCC----------CcceEEEEcccCE------EEECccCCCCCccceEEecCCC-eEEEEECC
Confidence 56899999999999887554 2399999999986 8899998643111112234443 36676542
Q ss_pred cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEcc--CCcEE-EEE-ecc
Q psy463 192 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWAN--ESVVA-AWV-NRV 267 (790)
Q Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp--Dg~~~-~~~-~r~ 267 (790)
..|+.+|+++.+.+.+ .. ..+.+...-.|+. |++.+ ... .+.
T Consensus 102 ------------~~l~~vdL~T~e~~~v------y~----------------~p~~~~g~gt~v~n~d~t~~~g~e~~~~ 147 (386)
T PF14583_consen 102 ------------RSLRRVDLDTLEERVV------YE----------------VPDDWKGYGTWVANSDCTKLVGIEISRE 147 (386)
T ss_dssp ------------TEEEEEETTT--EEEE------EE------------------TTEEEEEEEEE-TTSSEEEEEEEEGG
T ss_pred ------------CeEEEEECCcCcEEEE------EE----------------CCcccccccceeeCCCccEEEEEEEeeh
Confidence 5899999999874322 20 2344555567754 45533 322 221
Q ss_pred C-----------------cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463 268 Q-----------------NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW 330 (790)
Q Consensus 268 ~-----------------~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~ 330 (790)
. ...+|+.+|+.+|+.+.+..+ +.|++ .+.+||....++.++- |-.. +.-
T Consensus 148 d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~---~~wlg---H~~fsP~dp~li~fCH---EGpw----~~V 214 (386)
T PF14583_consen 148 DWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFED---TDWLG---HVQFSPTDPTLIMFCH---EGPW----DLV 214 (386)
T ss_dssp G-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEE---SS-EE---EEEEETTEEEEEEEEE----S-T----TTS
T ss_pred hccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEec---Ccccc---CcccCCCCCCEEEEec---cCCc----cee
Confidence 1 116899999999999999886 56764 7999998777776665 2222 222
Q ss_pred -cEEEEEEcCCCCcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeec----
Q psy463 331 -DHLTFIDLDDQAGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCD---- 404 (790)
Q Consensus 331 -~~l~~~d~~~~~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~---- 404 (790)
..||+++.+++. .+.+... ..+..+.--|+|||+.|+|.+.......+-|+.+++++ ++.+.+...
T Consensus 215 d~RiW~i~~dg~~------~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t--~~~~~~~~~p~~~ 286 (386)
T PF14583_consen 215 DQRIWTINTDGSN------VKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDT--GERRRLMEMPWCS 286 (386)
T ss_dssp S-SEEEEETTS---------EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT----EEEEEEE-SEE
T ss_pred ceEEEEEEcCCCc------ceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCC--CCceEEEeCCcee
Confidence 379999998876 4444332 23344446799999999997764222345677777765 333332211
Q ss_pred ---------c-ccc---------------------------C-------------------CCcccEEEEEEecCCcEEE
Q psy463 405 ---------L-LTS---------------------------A-------------------NQKCSYSGATFSTNVSYYV 428 (790)
Q Consensus 405 ---------~-~~~---------------------------~-------------------~~~~~~~~~~~s~dg~~~~ 428 (790)
+ +.+ . .....-..++|||||++++
T Consensus 287 H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~Vl 366 (386)
T PF14583_consen 287 HFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVL 366 (386)
T ss_dssp EEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEE
T ss_pred eeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEE
Confidence 0 000 0 0011223579999999999
Q ss_pred EEeecCCCCeEEEEecC
Q psy463 429 LSCIGPGIPEIMLFDKT 445 (790)
Q Consensus 429 ~~~~~~~~~~i~~~~~~ 445 (790)
|.++..+.+.||++++.
T Consensus 367 F~Sd~~G~~~vY~v~i~ 383 (386)
T PF14583_consen 367 FRSDMEGPPAVYLVEIP 383 (386)
T ss_dssp EEE-TTSS-EEEEEE--
T ss_pred EECCCCCCccEEEEeCc
Confidence 99999889999998763
No 61
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.62 E-value=1.4e-14 Score=150.59 Aligned_cols=279 Identities=15% Similarity=0.151 Sum_probs=143.5
Q ss_pred EEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccc-------------------cc---ccchHHHHHhcC
Q psy463 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTE-------------------RF---SVDWNLYLADNK 532 (790)
Q Consensus 475 ~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~-------------------~~---~~~~~~~~~~~~ 532 (790)
|...||..|..+.+.|.+ +..+|+++||..+.....- .| ...+.. .+.++
T Consensus 2 ~~~~~g~~l~~~~~~~~~-------~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~-~l~~~ 73 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKN-------AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIE-NFNKN 73 (332)
T ss_pred ccCCCCCeEEEeeeeccC-------CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHH-HHHHC
Confidence 345689999999888752 3469999999877642000 00 012333 44458
Q ss_pred CeEEEEEcCCCCCCChhhhHhhhh-ccCCccchhHHHHHHHHHHHhC-----------------CCcCCCceEEEEechH
Q psy463 533 DIVVAYIDGRNSALKGNTLKYAGY-RRLGTVEIYDQINVTRYLQENL-----------------PYIDKTRTAIWGWSYG 594 (790)
Q Consensus 533 G~~v~~~d~rG~~~~g~~~~~~~~-~~~~~~~~~D~~~~~~~l~~~~-----------------~~~d~~ri~i~G~S~G 594 (790)
||.|+++|.||+|.+...-..... ..+ ...++|+...++.+.+.. .+-+..+++|+|||||
T Consensus 74 G~~V~~~D~rGHG~S~~~~~~~g~~~~~-~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmG 152 (332)
T TIGR01607 74 GYSVYGLDLQGHGESDGLQNLRGHINCF-DDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMG 152 (332)
T ss_pred CCcEEEecccccCCCccccccccchhhH-HHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCc
Confidence 999999999998865422000000 011 122456666666554310 0001357999999999
Q ss_pred HHHHHHHHhcCCC-------CceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEe
Q psy463 595 GYATGLALALDPS-------NVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVH 667 (790)
Q Consensus 595 G~~a~~~a~~~p~-------~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~ 667 (790)
|.++..++..++. ..++++|+.+|+.............+ ... ...+...+..+. |-+...
T Consensus 153 g~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~----------~~~-~~~l~~~~~~~~--p~~~~~ 219 (332)
T TIGR01607 153 GNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKF----------KYF-YLPVMNFMSRVF--PTFRIS 219 (332)
T ss_pred cHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchh----------hhh-HHHHHHHHHHHC--Cccccc
Confidence 9999988865432 15778888888754321100000000 000 000000000000 000000
Q ss_pred ecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhh-hhhhhhhccC-CccEEEEecCCCcccchhhhH
Q psy463 668 GTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIA-ALNNKVDRIR-DKQYLLVHGTMDDNVHFQQSM 745 (790)
Q Consensus 668 g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~-~~P~Lii~G~~D~~v~~~~~~ 745 (790)
...+. .......+.. ..++. .+................ .....+.+++ ++|+|++||++|.+++++.+.
T Consensus 220 ~~~~~----~~~~~~~~~~-~~Dp~----~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~ 290 (332)
T TIGR01607 220 KKIRY----EKSPYVNDII-KFDKF----RYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTV 290 (332)
T ss_pred Ccccc----ccChhhhhHH-hcCcc----ccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHH
Confidence 00000 0000000000 00110 000000000000000000 0012334442 589999999999999999999
Q ss_pred HHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHH
Q psy463 746 MLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLD 786 (790)
Q Consensus 746 ~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~ 786 (790)
.+++.+... .+++.+||+++|.+.. .++++++.+.+||+
T Consensus 291 ~~~~~~~~~--~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 291 SFYNKLSIS--NKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHHhccCC--CcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 888876543 3588899999999987 57889999999986
No 62
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.62 E-value=1.3e-14 Score=148.19 Aligned_cols=255 Identities=14% Similarity=0.059 Sum_probs=141.0
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463 479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR 558 (790)
Q Consensus 479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 558 (790)
+|.++++..... +...|.||++||.+++. ..|. .....++ .+|.|+++|+||+|.+... .
T Consensus 10 ~~~~~~~~~~~~-------~~~~~plvllHG~~~~~---~~w~--~~~~~L~-~~~~vi~~Dl~G~G~S~~~--~----- 69 (276)
T TIGR02240 10 DGQSIRTAVRPG-------KEGLTPLLIFNGIGANL---ELVF--PFIEALD-PDLEVIAFDVPGVGGSSTP--R----- 69 (276)
T ss_pred CCcEEEEEEecC-------CCCCCcEEEEeCCCcch---HHHH--HHHHHhc-cCceEEEECCCCCCCCCCC--C-----
Confidence 677777765421 12235789999987763 2333 1223344 4799999999998875432 1
Q ss_pred CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463 559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT 638 (790)
Q Consensus 559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~ 638 (790)
....++++.+.+..+++. ++..++.++||||||.+++.++.++|+ .++.+++.++......... .........
T Consensus 70 -~~~~~~~~~~~~~~~i~~---l~~~~~~LvG~S~GG~va~~~a~~~p~-~v~~lvl~~~~~~~~~~~~-~~~~~~~~~- 142 (276)
T TIGR02240 70 -HPYRFPGLAKLAARMLDY---LDYGQVNAIGVSWGGALAQQFAHDYPE-RCKKLILAATAAGAVMVPG-KPKVLMMMA- 142 (276)
T ss_pred -CcCcHHHHHHHHHHHHHH---hCcCceEEEEECHHHHHHHHHHHHCHH-HhhheEEeccCCccccCCC-chhHHHHhc-
Confidence 113455666556555553 345789999999999999999999885 8888888887653210000 000000000
Q ss_pred ccCchhhhhhc-cccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhh
Q psy463 639 FEDNLEGYKIA-ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALN 717 (790)
Q Consensus 639 ~~~~~~~~~~~-~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (790)
....+... .....+..+... ....+. .........+...... .+ +...... ......
T Consensus 143 ---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~----~~-----~~~~~~~-~~~~~~ 200 (276)
T TIGR02240 143 ---SPRRYIQPSHGIHIAPDIYGG-----AFRRDP----ELAMAHASKVRSGGKL----GY-----YWQLFAG-LGWTSI 200 (276)
T ss_pred ---Cchhhhccccccchhhhhccc-----eeeccc----hhhhhhhhhcccCCCc----hH-----HHHHHHH-cCCchh
Confidence 00000000 000000000000 000000 0000000000000000 00 0000000 001112
Q ss_pred hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463 718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC 788 (790)
Q Consensus 718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~ 788 (790)
..+.++ ++|+|+++|++|..+|+..++++.+.++.. ++.++++ ||.+.. .++++.+.+.+|++++
T Consensus 201 ~~l~~i-~~P~lii~G~~D~~v~~~~~~~l~~~~~~~----~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 201 HWLHKI-QQPTLVLAGDDDPIIPLINMRLLAWRIPNA----ELHIIDD-GHLFLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred hHhhcC-CCCEEEEEeCCCCcCCHHHHHHHHHhCCCC----EEEEEcC-CCchhhccHHHHHHHHHHHHHHh
Confidence 456788 999999999999999999999998877643 7778876 999887 8899999999999864
No 63
>PRK11460 putative hydrolase; Provisional
Probab=99.61 E-value=2.5e-14 Score=140.39 Aligned_cols=186 Identities=14% Similarity=0.076 Sum_probs=118.3
Q ss_pred CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC----ChhhhHhhhhccCCcc-------chhH
Q psy463 498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL----KGNTLKYAGYRRLGTV-------EIYD 566 (790)
Q Consensus 498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~----~g~~~~~~~~~~~~~~-------~~~D 566 (790)
....|+||++||.+++. ..|. ..... +...++.+..+.++|... .+..|.... ...... ....
T Consensus 13 ~~~~~~vIlLHG~G~~~---~~~~-~l~~~-l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~-~~~~~~~~~~~~~~~~~ 86 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNP---VAMG-EIGSW-FAPAFPDALVVSVGGPEPSGNGAGRQWFSVQ-GITEDNRQARVAAIMPT 86 (232)
T ss_pred CCCCcEEEEEeCCCCCh---HHHH-HHHHH-HHHHCCCCEEECCCCCCCcCCCCCcccccCC-CCCccchHHHHHHHHHH
Confidence 34568999999988763 2222 12223 333444334444444211 122221100 000001 1223
Q ss_pred HHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhh
Q psy463 567 QINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGY 646 (790)
Q Consensus 567 ~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 646 (790)
+.+.++++.++. .++.+||+++|+|+||.+++.++.++|. .++++++.++... ..+
T Consensus 87 l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~~~~~-~~~~vv~~sg~~~-------------~~~--------- 142 (232)
T PRK11460 87 FIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVKAEPG-LAGRVIAFSGRYA-------------SLP--------- 142 (232)
T ss_pred HHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHHhCCC-cceEEEEeccccc-------------ccc---------
Confidence 344556665533 4788899999999999999999987764 6666666554210 000
Q ss_pred hhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCc
Q psy463 647 KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDK 726 (790)
Q Consensus 647 ~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 726 (790)
..... ++
T Consensus 143 ------------------------------------------------------------------------~~~~~-~~ 149 (232)
T PRK11460 143 ------------------------------------------------------------------------ETAPT-AT 149 (232)
T ss_pred ------------------------------------------------------------------------ccccC-CC
Confidence 00012 68
Q ss_pred cEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463 727 QYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF 789 (790)
Q Consensus 727 P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l 789 (790)
|+|++||++|.+||++.+.++.+.|++.+.++++++||+++|.+.. +..+.+.+||.+.|
T Consensus 150 pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~---~~~~~~~~~l~~~l 209 (232)
T PRK11460 150 TIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDP---RLMQFALDRLRYTV 209 (232)
T ss_pred cEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCH---HHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999964 55666777776654
No 64
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.61 E-value=2.6e-14 Score=147.46 Aligned_cols=266 Identities=11% Similarity=0.005 Sum_probs=141.4
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463 479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR 558 (790)
Q Consensus 479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 558 (790)
+|..+++.... .. .|.||++||.+++ ...|.. ....++ ..|.|+++|.+|+|.+...-..... .
T Consensus 16 ~~~~i~y~~~G--------~~-~~~vlllHG~~~~---~~~w~~--~~~~L~-~~~~vi~~DlpG~G~S~~~~~~~~~-~ 79 (294)
T PLN02824 16 KGYNIRYQRAG--------TS-GPALVLVHGFGGN---ADHWRK--NTPVLA-KSHRVYAIDLLGYGYSDKPNPRSAP-P 79 (294)
T ss_pred cCeEEEEEEcC--------CC-CCeEEEECCCCCC---hhHHHH--HHHHHH-hCCeEEEEcCCCCCCCCCCcccccc-c
Confidence 66677654431 11 2689999999887 334442 223344 3479999999998876432100000 0
Q ss_pred CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc--ccchh-----
Q psy463 559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD--TIYSE----- 631 (790)
Q Consensus 559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~--~~~~~----- 631 (790)
-....+++..+.+..++++.+ .+++.++||||||.+++.++.++|+ ++++++++++........ .....
T Consensus 80 ~~~~~~~~~a~~l~~~l~~l~---~~~~~lvGhS~Gg~va~~~a~~~p~-~v~~lili~~~~~~~~~~~~~~~~~~~~~~ 155 (294)
T PLN02824 80 NSFYTFETWGEQLNDFCSDVV---GDPAFVICNSVGGVVGLQAAVDAPE-LVRGVMLINISLRGLHIKKQPWLGRPFIKA 155 (294)
T ss_pred cccCCHHHHHHHHHHHHHHhc---CCCeEEEEeCHHHHHHHHHHHhChh-heeEEEEECCCcccccccccchhhhHHHHH
Confidence 012446666666666665343 4789999999999999999999986 899999888753211000 00000
Q ss_pred --hhcCCCCccCchhhh-hhccccchhhhccCCcEEEEeecCC-CccChhhHHHHHHHHHhcCcch-hcccccCCCCcCC
Q psy463 632 --RYMGLPTFEDNLEGY-KIAALNNKVDRIRDKQYLLVHGTMD-DNVHFQQSMMLAKSLQHADIMF-QSQRYMGLPTFED 706 (790)
Q Consensus 632 --~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~p~l~~~g~~d-~~v~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~ 706 (790)
..+... . ....+ ........+..+ + .....+ ..+. ..+.+.+....... ....+...
T Consensus 156 ~~~~~~~~--~-~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~----- 217 (294)
T PLN02824 156 FQNLLRET--A-VGKAFFKSVATPETVKNI-----L-CQCYHDDSAVT----DELVEAILRPGLEPGAVDVFLDF----- 217 (294)
T ss_pred HHHHHhch--h-HHHHHHHhhcCHHHHHHH-----H-HHhccChhhcc----HHHHHHHHhccCCchHHHHHHHH-----
Confidence 000000 0 00000 000000000000 0 000000 0000 11111111111000 00000000
Q ss_pred cchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHH
Q psy463 707 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFL 785 (790)
Q Consensus 707 ~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl 785 (790)
............++++ ++|+|+|+|++|..+|.+.++.+.+... ..++++++++||..+. +++++.+.+.+||
T Consensus 218 -~~~~~~~~~~~~l~~i-~~P~lvi~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (294)
T PLN02824 218 -ISYSGGPLPEELLPAV-KCPVLIAWGEKDPWEPVELGRAYANFDA----VEDFIVLPGVGHCPQDEAPELVNPLIESFV 291 (294)
T ss_pred -hccccccchHHHHhhc-CCCeEEEEecCCCCCChHHHHHHHhcCC----ccceEEeCCCCCChhhhCHHHHHHHHHHHH
Confidence 0000000112446788 9999999999999999888777655332 2488999999999888 9999999999999
Q ss_pred HHh
Q psy463 786 DSC 788 (790)
Q Consensus 786 ~~~ 788 (790)
+++
T Consensus 292 ~~~ 294 (294)
T PLN02824 292 ARH 294 (294)
T ss_pred hcC
Confidence 864
No 65
>KOG4178|consensus
Probab=99.60 E-value=1.5e-13 Score=133.66 Aligned_cols=260 Identities=12% Similarity=0.098 Sum_probs=141.9
Q ss_pred CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463 499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL 578 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 578 (790)
...|+|+++||.|... ..|. .....++.+||+|+++|+||.|.+..+ .....+.+..+...+..+++++
T Consensus 42 ~~gP~illlHGfPe~w---yswr--~q~~~la~~~~rviA~DlrGyG~Sd~P------~~~~~Yt~~~l~~di~~lld~L 110 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESW---YSWR--HQIPGLASRGYRVIAPDLRGYGFSDAP------PHISEYTIDELVGDIVALLDHL 110 (322)
T ss_pred CCCCEEEEEccCCccc---hhhh--hhhhhhhhcceEEEecCCCCCCCCCCC------CCcceeeHHHHHHHHHHHHHHh
Confidence 4569999999999872 2233 334456778999999999997654332 1112245666666666777655
Q ss_pred CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc---cc---cccchhhh----cCCCCccCchhhhhh
Q psy463 579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI---YY---DTIYSERY----MGLPTFEDNLEGYKI 648 (790)
Q Consensus 579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~---~~---~~~~~~~~----~g~~~~~~~~~~~~~ 648 (790)
+ .+|+.++||+||+.+|+.++..+|+ ++++.+..+...... .. ...+...+ +..+ ......+..
T Consensus 111 g---~~k~~lvgHDwGaivaw~la~~~Pe-rv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~--~~~E~~~s~ 184 (322)
T KOG4178|consen 111 G---LKKAFLVGHDWGAIVAWRLALFYPE-RVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEP--GKPETELSK 184 (322)
T ss_pred c---cceeEEEeccchhHHHHHHHHhChh-hcceEEEecCCCCCcccchhhhhccccCccceeEecccc--Ccchhhhcc
Confidence 5 5899999999999999999999997 777777666543311 00 01111110 0111 000111111
Q ss_pred ccccchhhhcc---CCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhh-----hhhh
Q psy463 649 AALNNKVDRIR---DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAAL-----NNKV 720 (790)
Q Consensus 649 ~~~~~~~~~~~---~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 720 (790)
.........+. .....+..+..+.. +.....+-.+...... +...+. .-.++|++... -...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~w~t~edi~~~~~~f---~~~g~~------gplNyyrn~~r~w~a~~~~~ 254 (322)
T KOG4178|consen 185 DDTEMLVKTFRTRKTPGPLIVPKQPNEN-PLWLTEEDIAFYVSKF---QIDGFT------GPLNYYRNFRRNWEAAPWAL 254 (322)
T ss_pred chhHHhHHhhhccccCCccccCCCCCCc-cchhhHHHHHHHHhcc---cccccc------ccchhhHHHhhCchhccccc
Confidence 00000000000 01111111111111 0001111111111111 001111 11222222211 1335
Q ss_pred hccCCccEEEEecCCCcccchhh-hHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463 721 DRIRDKQYLLVHGTMDDNVHFQQ-SMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF 789 (790)
Q Consensus 721 ~~i~~~P~Lii~G~~D~~v~~~~-~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l 789 (790)
.++ ++|+++++|++|.+.+... ...+.+.+... .+.++++|.||+++. +++++.+.++.||++..
T Consensus 255 ~~i-~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l---~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 255 AKI-TIPVLFIWGDLDPVLPYPIFGELYRKDVPRL---TERVVIEGIGHFVQQEKPQEVNQAILGFINSFS 321 (322)
T ss_pred ccc-ccceEEEEecCcccccchhHHHHHHHhhccc---cceEEecCCcccccccCHHHHHHHHHHHHHhhc
Confidence 567 9999999999999988763 33333333332 267899999999998 99999999999998753
No 66
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.60 E-value=1.7e-14 Score=148.01 Aligned_cols=257 Identities=14% Similarity=0.058 Sum_probs=137.8
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463 479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR 558 (790)
Q Consensus 479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 558 (790)
+|..+++....+ ...|+||++||.++.. ..|. .....++ ++|.|+++|+||+|.+.....
T Consensus 14 ~~~~~~~~~~g~--------~~~~~vv~~hG~~~~~---~~~~--~~~~~l~-~~~~vi~~D~~G~G~S~~~~~------ 73 (278)
T TIGR03056 14 GPFHWHVQDMGP--------TAGPLLLLLHGTGAST---HSWR--DLMPPLA-RSFRVVAPDLPGHGFTRAPFR------ 73 (278)
T ss_pred CCEEEEEEecCC--------CCCCeEEEEcCCCCCH---HHHH--HHHHHHh-hCcEEEeecCCCCCCCCCccc------
Confidence 666666544321 2237899999987762 2333 2223344 579999999999876432211
Q ss_pred CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccc----cchhhhc
Q psy463 559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDT----IYSERYM 634 (790)
Q Consensus 559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~----~~~~~~~ 634 (790)
....+++..+.+..+++.. +.++++|+||||||.+++.++.++|. +++++++.++......... .+....+
T Consensus 74 -~~~~~~~~~~~l~~~i~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 148 (278)
T TIGR03056 74 -FRFTLPSMAEDLSALCAAE---GLSPDGVIGHSAGAAIALRLALDGPV-TPRMVVGINAALMPFEGMAGTLFPYMARVL 148 (278)
T ss_pred -cCCCHHHHHHHHHHHHHHc---CCCCceEEEECccHHHHHHHHHhCCc-ccceEEEEcCcccccccccccccchhhHhh
Confidence 1134566666666666533 34688999999999999999998885 6777777776543211000 0000000
Q ss_pred -CCCCccCchhhhhhccc-cchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcch-hcccccCCCCcCCcchhh
Q psy463 635 -GLPTFEDNLEGYKIAAL-NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMF-QSQRYMGLPTFEDNLEGY 711 (790)
Q Consensus 635 -g~~~~~~~~~~~~~~~~-~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~ 711 (790)
..+ ........... ........ ...+. ..... .......+....... .... ....+
T Consensus 149 ~~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~ 207 (278)
T TIGR03056 149 ACNP---FTPPMMSRGAADQQRVERLI-----RDTGS---LLDKA-GMTYYGRLIRSPAHVDGALS---------MMAQW 207 (278)
T ss_pred hhcc---cchHHHHhhcccCcchhHHh-----hcccc---ccccc-hhhHHHHhhcCchhhhHHHH---------Hhhcc
Confidence 000 00000000000 00000000 00000 00000 000111000000000 0000 00000
Q ss_pred hhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463 712 KIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD 786 (790)
Q Consensus 712 ~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~ 786 (790)
........++++ ++|+|+++|++|..+|+..++.+.+.++. +++.++|++||.+.. .++++.+.|.+||+
T Consensus 208 ~~~~~~~~~~~i-~~P~lii~g~~D~~vp~~~~~~~~~~~~~----~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 208 DLAPLNRDLPRI-TIPLHLIAGEEDKAVPPDESKRAATRVPT----ATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred cccchhhhcccC-CCCEEEEEeCCCcccCHHHHHHHHHhccC----CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 000112346678 89999999999999999988888776654 388999999999887 88999999999984
No 67
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.60 E-value=5.1e-14 Score=150.10 Aligned_cols=277 Identities=13% Similarity=0.072 Sum_probs=142.5
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHH--hcCCeEEEEEcCCCCCCChhhhHhhhh
Q psy463 479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLA--DNKDIVVAYIDGRNSALKGNTLKYAGY 556 (790)
Q Consensus 479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~--~~~G~~v~~~d~rG~~~~g~~~~~~~~ 556 (790)
.|.++++....|.+ +...|.||++||++++. ..|.......+. .+.+|.|+++|++|+|.+.... .
T Consensus 184 ~~~~l~~~~~gp~~-----~~~k~~VVLlHG~~~s~---~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~-~--- 251 (481)
T PLN03087 184 SNESLFVHVQQPKD-----NKAKEDVLFIHGFISSS---AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA-D--- 251 (481)
T ss_pred CCeEEEEEEecCCC-----CCCCCeEEEECCCCccH---HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC-C---
Confidence 56788888887764 22347899999998763 233321111221 2369999999999987654321 0
Q ss_pred ccCCccchhHHHHHH-HHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc-
Q psy463 557 RRLGTVEIYDQINVT-RYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM- 634 (790)
Q Consensus 557 ~~~~~~~~~D~~~~~-~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~- 634 (790)
....+++..+.+ +.+++.. +..++.++||||||.+++.++.++|+ +++.+++.++..........-....+
T Consensus 252 ---~~ytl~~~a~~l~~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe-~V~~LVLi~~~~~~~~~~~~~~~~~~~ 324 (481)
T PLN03087 252 ---SLYTLREHLEMIERSVLERY---KVKSFHIVAHSLGCILALALAVKHPG-AVKSLTLLAPPYYPVPKGVQATQYVMR 324 (481)
T ss_pred ---CcCCHHHHHHHHHHHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChH-hccEEEEECCCccccccchhHHHHHHH
Confidence 113355555555 3455433 35789999999999999999999986 78888888764321110000000000
Q ss_pred --CCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcch-hcccccC---CCCcCCc-
Q psy463 635 --GLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMF-QSQRYMG---LPTFEDN- 707 (790)
Q Consensus 635 --g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~-~~~~~~~---~~~~~~~- 707 (790)
.....+. ...+.. .+..+...+.....++. ..+. .....+...+....... ....+.. ...+...
T Consensus 325 ~~~~~~~~~-~~~~~~-~~~~w~~~~~~~~~~~~--~~~~----~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~ 396 (481)
T PLN03087 325 KVAPRRVWP-PIAFGA-SVACWYEHISRTICLVI--CKNH----RLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLH 396 (481)
T ss_pred HhcccccCC-ccccch-hHHHHHHHHHhhhhccc--ccch----HHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHH
Confidence 0000000 000000 00000000000000000 0000 00000000000000000 0000000 0000000
Q ss_pred --chh---hhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHH
Q psy463 708 --LEG---YKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHT 780 (790)
Q Consensus 708 --~~~---~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~ 780 (790)
... .....+....+++ ++|+|++||++|..+|++.++.+.+.++. ++++++|++||.... .++.+.+.
T Consensus 397 ~~i~~~~~~l~~~l~~l~~~I-~vPtLII~Ge~D~ivP~~~~~~la~~iP~----a~l~vI~~aGH~~~v~e~p~~fa~~ 471 (481)
T PLN03087 397 NIICGSGSKLDGYLDHVRDQL-KCDVAIFHGGDDELIPVECSYAVKAKVPR----ARVKVIDDKDHITIVVGRQKEFARE 471 (481)
T ss_pred HHHhchhhhhhhHHHHHHHhC-CCCEEEEEECCCCCCCHHHHHHHHHhCCC----CEEEEeCCCCCcchhhcCHHHHHHH
Confidence 000 0000011223468 99999999999999999999999888765 489999999999663 78899999
Q ss_pred HHHHHHH
Q psy463 781 LERFLDS 787 (790)
Q Consensus 781 i~~fl~~ 787 (790)
+++|...
T Consensus 472 L~~F~~~ 478 (481)
T PLN03087 472 LEEIWRR 478 (481)
T ss_pred HHHHhhc
Confidence 9999864
No 68
>PLN02965 Probable pheophorbidase
Probab=99.58 E-value=1.2e-13 Score=139.14 Aligned_cols=244 Identities=12% Similarity=0.043 Sum_probs=130.9
Q ss_pred EEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcC
Q psy463 503 LLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYID 582 (790)
Q Consensus 503 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d 582 (790)
.||++||.+.+. ..|. .....+++.||.|+++|+||+|.+..... ....++++.+.+..+++.++ .
T Consensus 5 ~vvllHG~~~~~---~~w~--~~~~~L~~~~~~via~Dl~G~G~S~~~~~-------~~~~~~~~a~dl~~~l~~l~-~- 70 (255)
T PLN02965 5 HFVFVHGASHGA---WCWY--KLATLLDAAGFKSTCVDLTGAGISLTDSN-------TVSSSDQYNRPLFALLSDLP-P- 70 (255)
T ss_pred EEEEECCCCCCc---CcHH--HHHHHHhhCCceEEEecCCcCCCCCCCcc-------ccCCHHHHHHHHHHHHHhcC-C-
Confidence 489999988663 2333 23334544799999999999886542200 11335666665555555333 1
Q ss_pred CCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC--cccccccchhhhcCCCCccCchhhhhhccccchhhhccC
Q psy463 583 KTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD--WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD 660 (790)
Q Consensus 583 ~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (790)
..++.++||||||.++..++.++|+ +++.++..++... .......+.....+.. ..+.
T Consensus 71 ~~~~~lvGhSmGG~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~------~~~~------------- 130 (255)
T PLN02965 71 DHKVILVGHSIGGGSVTEALCKFTD-KISMAIYVAAAMVKPGSIISPRLKNVMEGTE------KIWD------------- 130 (255)
T ss_pred CCCEEEEecCcchHHHHHHHHhCch-heeEEEEEccccCCCCCCccHHHHhhhhccc------ccee-------------
Confidence 1589999999999999999998885 7887777765421 0000000000000000 0000
Q ss_pred CcEEEEeecCCCccChhhHHHHHHHHHhcCcchh--cccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463 661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQ--SQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN 738 (790)
Q Consensus 661 ~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~ 738 (790)
.....+.......................... ............. ...........+..+ ++|+|+++|++|..
T Consensus 131 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i-~vP~lvi~g~~D~~ 206 (255)
T PLN02965 131 --YTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVR-AFQDLDKLPPNPEAE-KVPRVYIKTAKDNL 206 (255)
T ss_pred --eeeccCCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCc-chhhhhhccchhhcC-CCCEEEEEcCCCCC
Confidence 00000000000000000000000000000000 0000000000000 000000111234567 99999999999999
Q ss_pred cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463 739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC 788 (790)
Q Consensus 739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~ 788 (790)
+|+..++.+.+.+... ++++++++||+++. .++++.+.+.+|+++.
T Consensus 207 ~~~~~~~~~~~~~~~a----~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 207 FDPVRQDVMVENWPPA----QTYVLEDSDHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred CCHHHHHHHHHhCCcc----eEEEecCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 9999998888877654 88899999999998 8999999999998764
No 69
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.58 E-value=1.3e-13 Score=153.68 Aligned_cols=134 Identities=16% Similarity=0.216 Sum_probs=100.5
Q ss_pred EcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhh
Q psy463 476 PIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAG 555 (790)
Q Consensus 476 ~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~ 555 (790)
+..||.+|.+.+++|.+ .++.|+||++||..........+..... ..++++||+|+++|+||++.++..+.
T Consensus 2 ~~~DG~~L~~~~~~P~~-----~~~~P~Il~~~gyg~~~~~~~~~~~~~~-~~l~~~Gy~vv~~D~RG~g~S~g~~~--- 72 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAG-----GGPVPVILSRTPYGKDAGLRWGLDKTEP-AWFVAQGYAVVIQDTRGRGASEGEFD--- 72 (550)
T ss_pred cCCCCCEEEEEEEecCC-----CCCCCEEEEecCCCCchhhccccccccH-HHHHhCCcEEEEEeccccccCCCceE---
Confidence 45699999999999974 3468999999987654210011222223 34445899999999999887654422
Q ss_pred hccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc
Q psy463 556 YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI 623 (790)
Q Consensus 556 ~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~ 623 (790)
..+...++|+.++++|+.+ .++.+ .+|+++|+||||.+++.++..+|+ .+++++..++..++.
T Consensus 73 --~~~~~~~~D~~~~i~~l~~-q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~-~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 73 --LLGSDEAADGYDLVDWIAK-QPWCD-GNVGMLGVSYLAVTQLLAAVLQPP-ALRAIAPQEGVWDLY 135 (550)
T ss_pred --ecCcccchHHHHHHHHHHh-CCCCC-CcEEEEEeChHHHHHHHHhccCCC-ceeEEeecCcccchh
Confidence 1124678999999999988 66665 699999999999999999998775 899999998887653
No 70
>PRK06489 hypothetical protein; Provisional
Probab=99.57 E-value=9.5e-14 Score=146.98 Aligned_cols=68 Identities=18% Similarity=0.266 Sum_probs=57.3
Q ss_pred hhhhhccCCccEEEEecCCCcccchhhh--HHHHHHHHhcCCceEEEEcCCC----CCcCCCcchHHHHHHHHHHHHhh
Q psy463 717 NNKVDRIRDKQYLLVHGTMDDNVHFQQS--MMLAKSLQHADIMFQSQTYPDE----EHGLIGVRPHFYHTLERFLDSCF 789 (790)
Q Consensus 717 ~~~~~~i~~~P~Lii~G~~D~~v~~~~~--~~l~~~l~~~g~~~~~~~~p~~----~H~~~~~~~~~~~~i~~fl~~~l 789 (790)
...+++| ++|+|+|+|++|..+|++.+ +.+.+.+++. +++++|++ ||..+..++.+.+.|.+||+.+-
T Consensus 285 ~~~L~~I-~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a----~l~~i~~a~~~~GH~~~e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 285 SPDLEKI-KAPVLAINSADDERNPPETGVMEAALKRVKHG----RLVLIPASPETRGHGTTGSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred HHHHHhC-CCCEEEEecCCCcccChhhHHHHHHHHhCcCC----eEEEECCCCCCCCcccccCHHHHHHHHHHHHHhcc
Confidence 3567889 99999999999999998876 6777776654 89999996 99886588899999999998764
No 71
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.57 E-value=1.2e-13 Score=143.16 Aligned_cols=241 Identities=17% Similarity=0.148 Sum_probs=155.0
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc
Q psy463 478 QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR 557 (790)
Q Consensus 478 ~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~ 557 (790)
..+..+...+|.|. .. .....|+||++|||++....... .......++...|+.|+.+|||-.+.+..+
T Consensus 59 ~~~~~~~~~~y~p~-~~--~~~~~p~vly~HGGg~~~g~~~~-~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p------- 127 (312)
T COG0657 59 PSGDGVPVRVYRPD-RK--AAATAPVVLYLHGGGWVLGSLRT-HDALVARLAAAAGAVVVSVDYRLAPEHPFP------- 127 (312)
T ss_pred CCCCceeEEEECCC-CC--CCCCCcEEEEEeCCeeeecChhh-hHHHHHHHHHHcCCEEEecCCCCCCCCCCC-------
Confidence 34556778899982 11 45578999999999986442222 224556667778999999999998876433
Q ss_pred cCCccchhHHHHHHHHHHHhCC--CcCCCceEEEEechHHHHHHHHHhcCCCC---ceEEEEEeCCCCCcccccccchhh
Q psy463 558 RLGTVEIYDQINVTRYLQENLP--YIDKTRTAIWGWSYGGYATGLALALDPSN---VFKCGISVAPVTDWIYYDTIYSER 632 (790)
Q Consensus 558 ~~~~~~~~D~~~~~~~l~~~~~--~~d~~ri~i~G~S~GG~~a~~~a~~~p~~---~~~~~v~~~~~~~~~~~~~~~~~~ 632 (790)
..++|+.++++|+.++.. .+|+++|+|+|+|.||.+++.++..-.+. ..++.+.++|+.+...-...+..
T Consensus 128 ----~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~- 202 (312)
T COG0657 128 ----AALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPG- 202 (312)
T ss_pred ----chHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhh-
Confidence 558999999999987521 37899999999999999999887754432 56788899998776530000000
Q ss_pred hcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHH-HHHHHHHhcCcchhcccccCCCCcCCcchhh
Q psy463 633 YMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSM-MLAKSLQHADIMFQSQRYMGLPTFEDNLEGY 711 (790)
Q Consensus 633 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (790)
+.. .+.. ...... .+...+...... ...
T Consensus 203 -------------~~~---------------------~~~~-~~~~~~~~~~~~~~~~~~~--------------~~~-- 231 (312)
T COG0657 203 -------------YGE---------------------ADLL-DAAAILAWFADLYLGAAPD--------------RED-- 231 (312)
T ss_pred -------------cCC---------------------cccc-CHHHHHHHHHHHhCcCccc--------------cCC--
Confidence 000 0000 000000 000000000000 000
Q ss_pred hhhhhhhh--hhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC----cchHHHHHHHHHH
Q psy463 712 KIAALNNK--VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG----VRPHFYHTLERFL 785 (790)
Q Consensus 712 ~~~~~~~~--~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~i~~fl 785 (790)
...+++.. +..+ .|+|+++|+.|...+ ++..+.+.|+++|+++++..+++..|.+.. .....+..+..|+
T Consensus 232 p~~spl~~~~~~~l--PP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l 307 (312)
T COG0657 232 PEASPLASDDLSGL--PPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTGPEARSALRQIAAFL 307 (312)
T ss_pred CccCccccccccCC--CCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcceeccccCcHHHHHHHHHHHHHH
Confidence 00111111 2223 789999999999887 999999999999999999999999998854 2344466777777
Q ss_pred HHhh
Q psy463 786 DSCF 789 (790)
Q Consensus 786 ~~~l 789 (790)
...+
T Consensus 308 ~~~~ 311 (312)
T COG0657 308 RAAL 311 (312)
T ss_pred HHhc
Confidence 6543
No 72
>KOG1515|consensus
Probab=99.57 E-value=2.9e-13 Score=136.36 Aligned_cols=254 Identities=18% Similarity=0.155 Sum_probs=161.5
Q ss_pred EEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccc-cccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVT-ERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKY 553 (790)
Q Consensus 475 ~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~-~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~ 553 (790)
+.......+...+|+|.... ...+.|+||++|||++..... ......+...++++.+..|+.+|||-++.+..+
T Consensus 66 v~~~~~~~l~vRly~P~~~~--~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P--- 140 (336)
T KOG1515|consen 66 VTIDPFTNLPVRLYRPTSSS--SETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP--- 140 (336)
T ss_pred eEecCCCCeEEEEEcCCCCC--cccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC---
Confidence 33445567899999998765 337889999999999864311 111224566677778999999999998876544
Q ss_pred hhhccCCccchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCC-----CCceEEEEEeCCCCCcccc
Q psy463 554 AGYRRLGTVEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDP-----SNVFKCGISVAPVTDWIYY 625 (790)
Q Consensus 554 ~~~~~~~~~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p-----~~~~~~~v~~~~~~~~~~~ 625 (790)
..++|..++++|+.++ ...+|.+||+|+|-|.||.+|..++.+-- ...+++.+++.|+......
T Consensus 141 --------a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~ 212 (336)
T KOG1515|consen 141 --------AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDR 212 (336)
T ss_pred --------ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCC
Confidence 5689999999999874 23489999999999999999988776543 2367899999998654322
Q ss_pred ccc-chhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCc
Q psy463 626 DTI-YSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTF 704 (790)
Q Consensus 626 ~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 704 (790)
... +.+...+.+ .........+...+.-.+.. ....|..
T Consensus 213 ~~~e~~~~~~~~~-----------------------------------~~~~~~~~~~w~~~lP~~~~-----~~~~p~~ 252 (336)
T KOG1515|consen 213 TESEKQQNLNGSP-----------------------------------ELARPKIDKWWRLLLPNGKT-----DLDHPFI 252 (336)
T ss_pred CCHHHHHhhcCCc-----------------------------------chhHHHHHHHHHHhCCCCCC-----CcCCccc
Confidence 110 100000000 00000011111111000110 1111111
Q ss_pred CCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC------cchHHH
Q psy463 705 EDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG------VRPHFY 778 (790)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~------~~~~~~ 778 (790)
..... +.........-.|+|++.++.|... +++..+++.|++.|+++++++++++.|.++. .....+
T Consensus 253 np~~~-----~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~ 325 (336)
T KOG1515|consen 253 NPVGN-----SLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALM 325 (336)
T ss_pred ccccc-----ccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHH
Confidence 11100 0001111220366999999999764 7899999999999999999999999999875 345677
Q ss_pred HHHHHHHHHh
Q psy463 779 HTLERFLDSC 788 (790)
Q Consensus 779 ~~i~~fl~~~ 788 (790)
..+.+|+++.
T Consensus 326 ~~i~~fi~~~ 335 (336)
T KOG1515|consen 326 DAIVEFIKSN 335 (336)
T ss_pred HHHHHHHhhc
Confidence 8888888764
No 73
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.57 E-value=4.2e-14 Score=124.74 Aligned_cols=183 Identities=18% Similarity=0.191 Sum_probs=129.3
Q ss_pred CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463 499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL 578 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 578 (790)
...|+.+.+|--|-.....+.-...-....+.++||+++.+|+||.|.+..+|.+ |..+.+|..++++|+.++.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~------GiGE~~Da~aaldW~~~~h 99 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN------GIGELEDAAAALDWLQARH 99 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC------CcchHHHHHHHHHHHHhhC
Confidence 4567888887654321111111112334566789999999999999887766543 4567999999999999865
Q ss_pred CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhc
Q psy463 579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRI 658 (790)
Q Consensus 579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 658 (790)
+. ..-..+.|+|+|+++++.++.+.|+ ....++.+|..+. |..
T Consensus 100 p~--s~~~~l~GfSFGa~Ia~~la~r~~e--~~~~is~~p~~~~-----------------------~df---------- 142 (210)
T COG2945 100 PD--SASCWLAGFSFGAYIAMQLAMRRPE--ILVFISILPPINA-----------------------YDF---------- 142 (210)
T ss_pred CC--chhhhhcccchHHHHHHHHHHhccc--ccceeeccCCCCc-----------------------hhh----------
Confidence 53 2335889999999999999998764 3344444443320 000
Q ss_pred cCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463 659 RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN 738 (790)
Q Consensus 659 ~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~ 738 (790)
..+... .+|.|+|+|+.|.+
T Consensus 143 -----------------------------------------------------------s~l~P~-P~~~lvi~g~~Ddv 162 (210)
T COG2945 143 -----------------------------------------------------------SFLAPC-PSPGLVIQGDADDV 162 (210)
T ss_pred -----------------------------------------------------------hhccCC-CCCceeEecChhhh
Confidence 111222 68999999999998
Q ss_pred cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHH-Hhh
Q psy463 739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLD-SCF 789 (790)
Q Consensus 739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~-~~l 789 (790)
+.+......++. .+.+++.+++++|+++..-..+.+.+.+|+. ++|
T Consensus 163 v~l~~~l~~~~~-----~~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~~r~l 209 (210)
T COG2945 163 VDLVAVLKWQES-----IKITVITIPGADHFFHGKLIELRDTIADFLEDRRL 209 (210)
T ss_pred hcHHHHHHhhcC-----CCCceEEecCCCceecccHHHHHHHHHHHhhcccc
Confidence 888777766653 5668899999999999888888999999994 554
No 74
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.57 E-value=1.6e-14 Score=145.46 Aligned_cols=238 Identities=15% Similarity=0.110 Sum_probs=132.1
Q ss_pred CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463 500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP 579 (790)
Q Consensus 500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 579 (790)
+.|+||++||.+.+. ..|. .....++ .||.|+++|++|+|.+... .....+.+..+.+..+++.
T Consensus 12 ~~~~li~~hg~~~~~---~~~~--~~~~~l~-~~~~v~~~d~~G~G~s~~~--------~~~~~~~~~~~~~~~~i~~-- 75 (251)
T TIGR02427 12 GAPVLVFINSLGTDL---RMWD--PVLPALT-PDFRVLRYDKRGHGLSDAP--------EGPYSIEDLADDVLALLDH-- 75 (251)
T ss_pred CCCeEEEEcCcccch---hhHH--HHHHHhh-cccEEEEecCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHH--
Confidence 468999999987652 2232 1223444 6899999999998765321 1123456666666666553
Q ss_pred CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhcc
Q psy463 580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR 659 (790)
Q Consensus 580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 659 (790)
++..++.++|||+||.+++.++.++|. .++++++.++....... ..+........ .......... ......
T Consensus 76 -~~~~~v~liG~S~Gg~~a~~~a~~~p~-~v~~li~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~----~~~~~~ 146 (251)
T TIGR02427 76 -LGIERAVFCGLSLGGLIAQGLAARRPD-RVRALVLSNTAAKIGTP-ESWNARIAAVR--AEGLAALADA----VLERWF 146 (251)
T ss_pred -hCCCceEEEEeCchHHHHHHHHHHCHH-HhHHHhhccCccccCch-hhHHHHHhhhh--hccHHHHHHH----HHHHHc
Confidence 345789999999999999999998875 77777776654322110 00000000000 0000000000 000000
Q ss_pred CCcEEEEeecCCCcc-ChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463 660 DKQYLLVHGTMDDNV-HFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN 738 (790)
Q Consensus 660 ~~p~l~~~g~~d~~v-~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~ 738 (790)
.+ +... .......+...+...... . +...............++++ ++|+|+++|++|..
T Consensus 147 -~~--------~~~~~~~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~-~~Pvlii~g~~D~~ 206 (251)
T TIGR02427 147 -TP--------GFREAHPARLDLYRNMLVRQPPD----G------YAGCCAAIRDADFRDRLGAI-AVPTLCIAGDQDGS 206 (251)
T ss_pred -cc--------ccccCChHHHHHHHHHHHhcCHH----H------HHHHHHHHhcccHHHHhhhc-CCCeEEEEeccCCc
Confidence 00 0000 000001111111111100 0 00000011111223556778 89999999999999
Q ss_pred cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463 739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD 786 (790)
Q Consensus 739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~ 786 (790)
+|.+....+.+.++. .+++++|+++|.+.. .++.+.+.+.+||+
T Consensus 207 ~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 207 TPPELVREIADLVPG----ARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CChHHHHHHHHhCCC----ceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 999988888777653 488999999998887 88888889988873
No 75
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.56 E-value=9.4e-14 Score=140.62 Aligned_cols=261 Identities=16% Similarity=0.179 Sum_probs=145.6
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchH-----HHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463 479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWN-----LYLADNKDIVVAYIDGRNSALKGNTLKY 553 (790)
Q Consensus 479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~-----~~~~~~~G~~v~~~d~rG~~~~g~~~~~ 553 (790)
||++|.+.+|+| +.. ..+++|+||..|+................ ...++++||+|+.+|.||.+.++..+..
T Consensus 1 DGv~L~adv~~P-~~~--~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~ 77 (272)
T PF02129_consen 1 DGVRLAADVYRP-GAD--GGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP 77 (272)
T ss_dssp TS-EEEEEEEEE---T--TSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T
T ss_pred CCCEEEEEEEec-CCC--CCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc
Confidence 789999999999 433 67899999999987643110011000000 1125569999999999999887766543
Q ss_pred hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhh
Q psy463 554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERY 633 (790)
Q Consensus 554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~ 633 (790)
. ...+..|..++++|+.. +++-| .||+++|.||+|+.++.+|...|+ .++|++...+..++... ..+....
T Consensus 78 ~-----~~~e~~D~~d~I~W~~~-Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p-~LkAi~p~~~~~d~~~~-~~~~gG~ 148 (272)
T PF02129_consen 78 M-----SPNEAQDGYDTIEWIAA-QPWSN-GKVGMYGISYGGFTQWAAAARRPP-HLKAIVPQSGWSDLYRD-SIYPGGA 148 (272)
T ss_dssp T-----SHHHHHHHHHHHHHHHH-CTTEE-EEEEEEEETHHHHHHHHHHTTT-T-TEEEEEEESE-SBTCCT-SSEETTE
T ss_pred C-----ChhHHHHHHHHHHHHHh-CCCCC-CeEEeeccCHHHHHHHHHHhcCCC-CceEEEecccCCccccc-chhcCCc
Confidence 2 34679999999999998 67655 599999999999999999997665 89999999988776531 1111100
Q ss_pred cCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhH---HHHHHHHHhcCcchhcccccC-CCCcCCcch
Q psy463 634 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQS---MMLAKSLQHADIMFQSQRYMG-LPTFEDNLE 709 (790)
Q Consensus 634 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~---~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~ 709 (790)
+... ....+..... ........ ........... ....+........ . ..+.. .........
T Consensus 149 ~~~~----~~~~w~~~~~--~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ 213 (272)
T PF02129_consen 149 FRLG----FFAGWEDLQS--QQEDPQSR-------PAPDRDYLRERARYEALGDSPLGRLPR-D-PPYWDEWLDHPPYDP 213 (272)
T ss_dssp EBCC----HHHHHHHHHH--HHHHHTCC-------CCSSSHHHHHHHHHHCHHHHHHHHCHG-G-THHHHHHHHT-SSSH
T ss_pred cccc----chhHHHHHHH--HhhcccCC-------CchhhhhhhhhhhhhhhhhHHHhhhcc-c-cHHHHHHHhCCCcCH
Confidence 0000 0001100000 00000000 00000000000 0000001000000 0 00000 000122345
Q ss_pred hhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcC-CceEEEEcCCCCCc
Q psy463 710 GYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD-IMFQSQTYPDEEHG 769 (790)
Q Consensus 710 ~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g-~~~~~~~~p~~~H~ 769 (790)
.|+..++...++++ ++|+|++.|..|.... ..+.+.++.|+..+ .+.++++-|. +|.
T Consensus 214 ~w~~~~~~~~~~~i-~vP~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw-~H~ 271 (272)
T PF02129_consen 214 FWQERSPSERLDKI-DVPVLIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGPW-THG 271 (272)
T ss_dssp HHHTTBHHHHHGG---SEEEEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEESE-STT
T ss_pred HHHhCChHHHHhhC-CCCEEEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeCC-CCC
Confidence 66777776778999 9999999999997666 89999999999988 6778888775 674
No 76
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.56 E-value=3.5e-14 Score=143.35 Aligned_cols=238 Identities=18% Similarity=0.212 Sum_probs=127.2
Q ss_pred ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463 501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY 580 (790)
Q Consensus 501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 580 (790)
.|.||++||.+++ ...|.. ....++ ..|.|+++|+||+|.+... ....++++ ++.+.+ ..
T Consensus 13 ~~~ivllHG~~~~---~~~w~~--~~~~L~-~~~~vi~~Dl~G~G~S~~~---------~~~~~~~~---~~~l~~-~~- 72 (256)
T PRK10349 13 NVHLVLLHGWGLN---AEVWRC--IDEELS-SHFTLHLVDLPGFGRSRGF---------GALSLADM---AEAVLQ-QA- 72 (256)
T ss_pred CCeEEEECCCCCC---hhHHHH--HHHHHh-cCCEEEEecCCCCCCCCCC---------CCCCHHHH---HHHHHh-cC-
Confidence 3569999998776 334442 223344 4699999999998765321 11223333 344444 22
Q ss_pred cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhh---ccccchhhh
Q psy463 581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKI---AALNNKVDR 657 (790)
Q Consensus 581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~ 657 (790)
.+++.++||||||++++.++.++|. +++.++++++......... +... . ......+.. ......+..
T Consensus 73 --~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lili~~~~~~~~~~~-~~~~--~----~~~~~~~~~~~~~~~~~~~~~ 142 (256)
T PRK10349 73 --PDKAIWLGWSLGGLVASQIALTHPE-RVQALVTVASSPCFSARDE-WPGI--K----PDVLAGFQQQLSDDFQRTVER 142 (256)
T ss_pred --CCCeEEEEECHHHHHHHHHHHhChH-hhheEEEecCccceecCCC-CCcc--c----HHHHHHHHHHHHhchHHHHHH
Confidence 4789999999999999999998875 7787777665322211000 0000 0 000000000 000000000
Q ss_pred ccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCc
Q psy463 658 IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDD 737 (790)
Q Consensus 658 ~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~ 737 (790)
+.. . ..............+...+...... ...........+...+....+.++ ++|+|+++|++|.
T Consensus 143 ~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~~D~ 208 (256)
T PRK10349 143 FLA-L-----QTMGTETARQDARALKKTVLALPMP-------EVDVLNGGLEILKTVDLRQPLQNV-SMPFLRLYGYLDG 208 (256)
T ss_pred HHH-H-----HHccCchHHHHHHHHHHHhhccCCC-------cHHHHHHHHHHHHhCccHHHHhhc-CCCeEEEecCCCc
Confidence 000 0 0000000000000111111000000 000000000111122333567788 9999999999999
Q ss_pred ccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463 738 NVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD 786 (790)
Q Consensus 738 ~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~ 786 (790)
.+|.+.+..+.+.++.. +++++|++||++.. .++.+.+.+.+|-+
T Consensus 209 ~~~~~~~~~~~~~i~~~----~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 209 LVPRKVVPMLDKLWPHS----ESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred cCCHHHHHHHHHhCCCC----eEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 99988887777766544 89999999999988 88999999998854
No 77
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.56 E-value=2.8e-13 Score=139.89 Aligned_cols=267 Identities=9% Similarity=0.012 Sum_probs=138.0
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463 479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR 558 (790)
Q Consensus 479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 558 (790)
+|.++++... + ..|.||++||.+++ ...|.. ....+++. +.|+++|.||.|.+.....
T Consensus 15 ~g~~i~y~~~--------G--~g~~vvllHG~~~~---~~~w~~--~~~~L~~~-~~via~D~~G~G~S~~~~~------ 72 (295)
T PRK03592 15 LGSRMAYIET--------G--EGDPIVFLHGNPTS---SYLWRN--IIPHLAGL-GRCLAPDLIGMGASDKPDI------ 72 (295)
T ss_pred CCEEEEEEEe--------C--CCCEEEEECCCCCC---HHHHHH--HHHHHhhC-CEEEEEcCCCCCCCCCCCC------
Confidence 7777776654 2 22679999999876 333432 23344444 4999999999887543311
Q ss_pred CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc---ccccchh--hh
Q psy463 559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY---YDTIYSE--RY 633 (790)
Q Consensus 559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~---~~~~~~~--~~ 633 (790)
...+.+..+.+..+++.. ..+++.++|||+||.+++.++.++|+ +++.++++++...... ....... ..
T Consensus 73 --~~~~~~~a~dl~~ll~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lil~~~~~~~~~~~~~~~~~~~~~~~ 146 (295)
T PRK03592 73 --DYTFADHARYLDAWFDAL---GLDDVVLVGHDWGSALGFDWAARHPD-RVRGIAFMEAIVRPMTWDDFPPAVRELFQA 146 (295)
T ss_pred --CCCHHHHHHHHHHHHHHh---CCCCeEEEEECHHHHHHHHHHHhChh-heeEEEEECCCCCCcchhhcchhHHHHHHH
Confidence 133455555555555533 34789999999999999999999985 8898888887432111 0000000 00
Q ss_pred cCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhccccc-CCCCcCCcchhhh
Q psy463 634 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYM-GLPTFEDNLEGYK 712 (790)
Q Consensus 634 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~ 712 (790)
+..+ ......+... ......+. ..........+....+...............+. ....-........
T Consensus 147 ~~~~--~~~~~~~~~~--~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (295)
T PRK03592 147 LRSP--GEGEEMVLEE--NVFIERVL-------PGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVA 215 (295)
T ss_pred HhCc--ccccccccch--hhHHhhcc-------cCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHh
Confidence 0100 0000000000 00000000 000000001110111111000000000000000 0000000000000
Q ss_pred -hhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463 713 -IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC 788 (790)
Q Consensus 713 -~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~ 788 (790)
.......+.++ ++|+|+|+|++|..+++....++...+.. ..++.+++++||.+.. +++++.+.+.+|+.++
T Consensus 216 ~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 216 LVEEYAQWLATS-DVPKLLINAEPGAILTTGAIRDWCRSWPN---QLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred hhhHhHHHhccC-CCCeEEEeccCCcccCcHHHHHHHHHhhh---hcceeeccCcchhhhhcCHHHHHHHHHHHHHHh
Confidence 00112345678 99999999999999966555555444332 2488899999999998 8999999999999875
No 78
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.56 E-value=1.1e-13 Score=126.26 Aligned_cols=145 Identities=19% Similarity=0.166 Sum_probs=106.0
Q ss_pred EEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcC
Q psy463 503 LLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYID 582 (790)
Q Consensus 503 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d 582 (790)
+||++||..+. ...|. .+. ..++++||.|+.+|+++.+.... ..+..++++++..... |
T Consensus 1 ~vv~~HG~~~~---~~~~~-~~~-~~l~~~G~~v~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~--~ 59 (145)
T PF12695_consen 1 VVVLLHGWGGS---RRDYQ-PLA-EALAEQGYAVVAFDYPGHGDSDG--------------ADAVERVLADIRAGYP--D 59 (145)
T ss_dssp EEEEECTTTTT---THHHH-HHH-HHHHHTTEEEEEESCTTSTTSHH--------------SHHHHHHHHHHHHHHC--T
T ss_pred CEEEECCCCCC---HHHHH-HHH-HHHHHCCCEEEEEecCCCCccch--------------hHHHHHHHHHHHhhcC--C
Confidence 58899999876 33333 233 34455799999999998765421 1244445555433122 7
Q ss_pred CCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCc
Q psy463 583 KTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQ 662 (790)
Q Consensus 583 ~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p 662 (790)
.++|+++|||+||.+++.++.++ ..++++++.+|..+.
T Consensus 60 ~~~i~l~G~S~Gg~~a~~~~~~~--~~v~~~v~~~~~~~~---------------------------------------- 97 (145)
T PF12695_consen 60 PDRIILIGHSMGGAIAANLAARN--PRVKAVVLLSPYPDS---------------------------------------- 97 (145)
T ss_dssp CCEEEEEEETHHHHHHHHHHHHS--TTESEEEEESESSGC----------------------------------------
T ss_pred CCcEEEEEEccCcHHHHHHhhhc--cceeEEEEecCccch----------------------------------------
Confidence 79999999999999999999977 378888888872110
Q ss_pred EEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchh
Q psy463 663 YLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQ 742 (790)
Q Consensus 663 ~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~ 742 (790)
..+.+. +.|+|+++|++|..++++
T Consensus 98 -------------------------------------------------------~~~~~~-~~pv~~i~g~~D~~~~~~ 121 (145)
T PF12695_consen 98 -------------------------------------------------------EDLAKI-RIPVLFIHGENDPLVPPE 121 (145)
T ss_dssp -------------------------------------------------------HHHTTT-TSEEEEEEETT-SSSHHH
T ss_pred -------------------------------------------------------hhhhcc-CCcEEEEEECCCCcCCHH
Confidence 223345 789999999999999999
Q ss_pred hhHHHHHHHHhcCCceEEEEcCCCCCc
Q psy463 743 QSMMLAKSLQHADIMFQSQTYPDEEHG 769 (790)
Q Consensus 743 ~~~~l~~~l~~~g~~~~~~~~p~~~H~ 769 (790)
+...+++.++ .+.+++++++++|+
T Consensus 122 ~~~~~~~~~~---~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 122 QVRRLYEALP---GPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHHHHC---SSEEEEEETTS-TT
T ss_pred HHHHHHHHcC---CCcEEEEeCCCcCc
Confidence 9999999887 45799999999995
No 79
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.56 E-value=9.4e-14 Score=139.30 Aligned_cols=238 Identities=17% Similarity=0.166 Sum_probs=126.8
Q ss_pred ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463 501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY 580 (790)
Q Consensus 501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 580 (790)
.|.||++||.+++. ..|. .....++ .+|.|+++|+||.|.+... ... ++.+.++.+.+.
T Consensus 4 ~~~iv~~HG~~~~~---~~~~--~~~~~l~-~~~~vi~~d~~G~G~s~~~---------~~~---~~~~~~~~~~~~--- 62 (245)
T TIGR01738 4 NVHLVLIHGWGMNA---EVFR--CLDEELS-AHFTLHLVDLPGHGRSRGF---------GPL---SLADAAEAIAAQ--- 62 (245)
T ss_pred CceEEEEcCCCCch---hhHH--HHHHhhc-cCeEEEEecCCcCccCCCC---------CCc---CHHHHHHHHHHh---
Confidence 36789999987762 2332 2233444 5799999999998764321 012 333344445441
Q ss_pred cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhc---cccchhhh
Q psy463 581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIA---ALNNKVDR 657 (790)
Q Consensus 581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~ 657 (790)
. ..++.++||||||.+++.++.++|. .++++++.++...+.... .+.... . ......+... ........
T Consensus 63 ~-~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~~il~~~~~~~~~~~-~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~ 134 (245)
T TIGR01738 63 A-PDPAIWLGWSLGGLVALHIAATHPD-RVRALVTVASSPCFSARE-DWPEGI---K--PDVLTGFQQQLSDDYQRTIER 134 (245)
T ss_pred C-CCCeEEEEEcHHHHHHHHHHHHCHH-hhheeeEecCCcccccCC-cccccC---C--HHHHHHHHHHhhhhHHHHHHH
Confidence 2 2689999999999999999998885 788887776643321100 000000 0 0000000000 00000000
Q ss_pred ccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCc
Q psy463 658 IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDD 737 (790)
Q Consensus 658 ~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~ 737 (790)
...... .+.... ......+...+...... ...........+........+.++ ++|+|+++|++|.
T Consensus 135 ~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~g~~D~ 200 (245)
T TIGR01738 135 FLALQT---LGTPTA---RQDARALKQTLLARPTP-------NVQVLQAGLEILATVDLRQPLQNI-SVPFLRLYGYLDG 200 (245)
T ss_pred HHHHHH---hcCCcc---chHHHHHHHHhhccCCC-------CHHHHHHHHHHhhcccHHHHHhcC-CCCEEEEeecCCc
Confidence 000000 000000 00000111111100000 000000000001111222456788 9999999999999
Q ss_pred ccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHH
Q psy463 738 NVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFL 785 (790)
Q Consensus 738 ~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl 785 (790)
.+|++..+.+.+.++ .+++.++|++||.+.. +++++.+.+.+|+
T Consensus 201 ~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 201 LVPAKVVPYLDKLAP----HSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred ccCHHHHHHHHHhCC----CCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 999988888877665 3588999999999887 8999999999985
No 80
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.55 E-value=2e-13 Score=132.14 Aligned_cols=281 Identities=15% Similarity=0.107 Sum_probs=160.8
Q ss_pred EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463 471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT 550 (790)
Q Consensus 471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~ 550 (790)
....+..+||..+......++ ...+.|+||.+||..|+. .+.|...+... +.++||.|+++|.||+++.-.
T Consensus 50 ~re~v~~pdg~~~~ldw~~~p-----~~~~~P~vVl~HGL~G~s--~s~y~r~L~~~-~~~rg~~~Vv~~~Rgcs~~~n- 120 (345)
T COG0429 50 TRERLETPDGGFIDLDWSEDP-----RAAKKPLVVLFHGLEGSS--NSPYARGLMRA-LSRRGWLVVVFHFRGCSGEAN- 120 (345)
T ss_pred ceEEEEcCCCCEEEEeeccCc-----cccCCceEEEEeccCCCC--cCHHHHHHHHH-HHhcCCeEEEEecccccCCcc-
Confidence 344666677766665555543 245569999999988874 33344333333 445899999999999876332
Q ss_pred hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHH-HHHHHHHhcCCCCceEEEEEeCCCCCcccc----
Q psy463 551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGG-YATGLALALDPSNVFKCGISVAPVTDWIYY---- 625 (790)
Q Consensus 551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG-~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~---- 625 (790)
....-+.....+|+...++++.+..+ ..++..+|.|+|| .++.+++..-.+....++++++...++..-
T Consensus 121 ---~~p~~yh~G~t~D~~~~l~~l~~~~~---~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l 194 (345)
T COG0429 121 ---TSPRLYHSGETEDIRFFLDWLKARFP---PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRL 194 (345)
T ss_pred ---cCcceecccchhHHHHHHHHHHHhCC---CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHh
Confidence 11222233446999999999987444 5799999999999 666666664444445566655554444211
Q ss_pred cccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcC
Q psy463 626 DTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFE 705 (790)
Q Consensus 626 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 705 (790)
+..+..++.. .....+-... .+.+++ .+ ++..-..+ ....+-++.+...+ ...-.....+.
T Consensus 195 ~~~~s~~ly~-----r~l~~~L~~~---~~~kl~---~l--~~~~p~~~--~~~ik~~~ti~eFD----~~~Tap~~Gf~ 255 (345)
T COG0429 195 DSGFSLRLYS-----RYLLRNLKRN---AARKLK---EL--EPSLPGTV--LAAIKRCRTIREFD----DLLTAPLHGFA 255 (345)
T ss_pred cCchhhhhhH-----HHHHHHHHHH---HHHHHH---hc--CcccCcHH--HHHHHhhchHHhcc----ceeeecccCCC
Confidence 1111101000 0000111110 111111 00 11111111 00011111111111 11111122466
Q ss_pred CcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC----cch--HHHH
Q psy463 706 DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG----VRP--HFYH 779 (790)
Q Consensus 706 ~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~----~~~--~~~~ 779 (790)
+...+|++.|.+..+.+| .+|+||||...|++++.+..-..... ....+.+.+-+-.||.-.. ... -..+
T Consensus 256 da~dYYr~aSs~~~L~~I-r~PtLii~A~DDP~~~~~~iP~~~~~---~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ 331 (345)
T COG0429 256 DAEDYYRQASSLPLLPKI-RKPTLIINAKDDPFMPPEVIPKLQEM---LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQ 331 (345)
T ss_pred cHHHHHHhcccccccccc-ccceEEEecCCCCCCChhhCCcchhc---CCCceEEEeecCCceEEeccCccccchhhHHH
Confidence 888999999999999999 99999999999999987654444332 2345788888888995442 122 3447
Q ss_pred HHHHHHHHhh
Q psy463 780 TLERFLDSCF 789 (790)
Q Consensus 780 ~i~~fl~~~l 789 (790)
.+.+||+..+
T Consensus 332 ri~~~l~~~~ 341 (345)
T COG0429 332 RILDWLDPFL 341 (345)
T ss_pred HHHHHHHHHH
Confidence 8899998765
No 81
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.54 E-value=1.5e-13 Score=133.96 Aligned_cols=192 Identities=17% Similarity=0.131 Sum_probs=111.1
Q ss_pred CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCC---CCChh---hhHhhhhccC-CccchhHHH--
Q psy463 498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNS---ALKGN---TLKYAGYRRL-GTVEIYDQI-- 568 (790)
Q Consensus 498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~---~~~g~---~~~~~~~~~~-~~~~~~D~~-- 568 (790)
.+..|+||++||.+.+. +.+.. .....+......++.++.+-. ...|. .|........ .....+++.
T Consensus 11 ~~~~~lvi~LHG~G~~~---~~~~~-~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s 86 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSE---DLFAL-LAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEES 86 (216)
T ss_dssp ST-SEEEEEE--TTS-H---HHHHH-HHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHH
T ss_pred CCCceEEEEECCCCCCc---chhHH-HHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHH
Confidence 45679999999986652 22221 111112234677777765321 00111 2211111011 101122222
Q ss_pred -----HHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCch
Q psy463 569 -----NVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNL 643 (790)
Q Consensus 569 -----~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 643 (790)
+.++...+ .+ ++.+||++.|+|+||.+|+.++.++|. .++++++.+|......
T Consensus 87 ~~~l~~li~~~~~-~~-i~~~ri~l~GFSQGa~~al~~~l~~p~-~~~gvv~lsG~~~~~~------------------- 144 (216)
T PF02230_consen 87 AERLDELIDEEVA-YG-IDPSRIFLGGFSQGAAMALYLALRYPE-PLAGVVALSGYLPPES------------------- 144 (216)
T ss_dssp HHHHHHHHHHHHH-TT---GGGEEEEEETHHHHHHHHHHHCTSS-TSSEEEEES---TTGC-------------------
T ss_pred HHHHHHHHHHHHH-cC-CChhheehhhhhhHHHHHHHHHHHcCc-CcCEEEEeeccccccc-------------------
Confidence 22333333 44 889999999999999999999999986 8889998888432110
Q ss_pred hhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhcc
Q psy463 644 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRI 723 (790)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 723 (790)
... ......
T Consensus 145 ----------------------------------------------~~~-------------------------~~~~~~ 153 (216)
T PF02230_consen 145 ----------------------------------------------ELE-------------------------DRPEAL 153 (216)
T ss_dssp ----------------------------------------------CCH-------------------------CCHCCC
T ss_pred ----------------------------------------------ccc-------------------------cccccc
Confidence 000 111122
Q ss_pred CCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463 724 RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF 789 (790)
Q Consensus 724 ~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l 789 (790)
.++|+|++||..|+++|.+.++...+.|++.+.++++..|++.+|.+. .+.++.+.+||++++
T Consensus 154 ~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~---~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 154 AKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS---PEELRDLREFLEKHI 216 (216)
T ss_dssp CTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----HHHHHHHHHHHHHH-
T ss_pred CCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC---HHHHHHHHHHHhhhC
Confidence 168999999999999999999999999999999999999999999985 477888999999874
No 82
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.54 E-value=5e-13 Score=141.13 Aligned_cols=253 Identities=12% Similarity=0.019 Sum_probs=127.7
Q ss_pred ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463 501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY 580 (790)
Q Consensus 501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 580 (790)
.|.||++||.+++. ..|.. + ...++ .+|.|+++|++|+|.+..... ....+++..+.+..+++.+
T Consensus 88 gp~lvllHG~~~~~---~~w~~-~-~~~L~-~~~~via~Dl~G~G~S~~~~~-------~~~~~~~~a~~l~~~l~~l-- 152 (360)
T PLN02679 88 GPPVLLVHGFGASI---PHWRR-N-IGVLA-KNYTVYAIDLLGFGASDKPPG-------FSYTMETWAELILDFLEEV-- 152 (360)
T ss_pred CCeEEEECCCCCCH---HHHHH-H-HHHHh-cCCEEEEECCCCCCCCCCCCC-------ccccHHHHHHHHHHHHHHh--
Confidence 36799999988762 23332 1 22344 489999999999886543210 0123444444444444423
Q ss_pred cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc--ccchhhh-----------cCCCCccCchhhhh
Q psy463 581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD--TIYSERY-----------MGLPTFEDNLEGYK 647 (790)
Q Consensus 581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~--~~~~~~~-----------~g~~~~~~~~~~~~ 647 (790)
...++.|+||||||.+++.++..+++++++++|++++........ ..+.... +..+ ......+.
T Consensus 153 -~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 229 (360)
T PLN02679 153 -VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQR--GIASALFN 229 (360)
T ss_pred -cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhch--hhHHHHHH
Confidence 347899999999999999888643334888888887643211000 0000000 0000 00000000
Q ss_pred hccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcc-hhcccccCCCCcCCcchhhhhhhhhhhhhccCCc
Q psy463 648 IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM-FQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDK 726 (790)
Q Consensus 648 ~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 726 (790)
..........+. .. ..... ..+. ..+.+........ .....+... ............+.++ ++
T Consensus 230 ~~~~~~~~~~~~-~~---~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~i-~~ 293 (360)
T PLN02679 230 RVKQRDNLKNIL-LS---VYGNK-EAVD----DELVEIIRGPADDEGALDAFVSI------VTGPPGPNPIKLIPRI-SL 293 (360)
T ss_pred HhcCHHHHHHHH-HH---hccCc-ccCC----HHHHHHHHhhccCCChHHHHHHH------HhcCCCCCHHHHhhhc-CC
Confidence 000000000000 00 00000 0000 0111111000000 000000000 0000000112456788 99
Q ss_pred cEEEEecCCCcccchhhh-HHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463 727 QYLLVHGTMDDNVHFQQS-MMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS 787 (790)
Q Consensus 727 P~Lii~G~~D~~v~~~~~-~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~ 787 (790)
|+|+++|++|..+|+... ..+.+.+.+.-.+++++++|++||.++. .++++.+.|.+||++
T Consensus 294 PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 294 PILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 999999999999998743 2333444433335689999999999888 899999999999986
No 83
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.53 E-value=4.3e-13 Score=138.82 Aligned_cols=123 Identities=15% Similarity=0.099 Sum_probs=80.5
Q ss_pred EEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHh
Q psy463 474 SVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKY 553 (790)
Q Consensus 474 ~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~ 553 (790)
.+...+|.++++....+ ...+.||++||+++... . ..+. ..+...+|.|+++|+||+|.+....
T Consensus 8 ~~~~~~~~~l~y~~~g~--------~~~~~lvllHG~~~~~~---~--~~~~-~~~~~~~~~vi~~D~~G~G~S~~~~-- 71 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSGN--------PDGKPVVFLHGGPGSGT---D--PGCR-RFFDPETYRIVLFDQRGCGKSTPHA-- 71 (306)
T ss_pred eEEcCCCcEEEEEECcC--------CCCCEEEEECCCCCCCC---C--HHHH-hccCccCCEEEEECCCCCCCCCCCC--
Confidence 45555788888765422 11245789999877632 1 1111 2233368999999999987654221
Q ss_pred hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463 554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT 620 (790)
Q Consensus 554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~ 620 (790)
........++.+.+..+.+++ +..++.++||||||.+++.++.++|. .++++|+.++..
T Consensus 72 ----~~~~~~~~~~~~dl~~l~~~l---~~~~~~lvG~S~GG~ia~~~a~~~p~-~v~~lvl~~~~~ 130 (306)
T TIGR01249 72 ----CLEENTTWDLVADIEKLREKL---GIKNWLVFGGSWGSTLALAYAQTHPE-VVTGLVLRGIFL 130 (306)
T ss_pred ----CcccCCHHHHHHHHHHHHHHc---CCCCEEEEEECHHHHHHHHHHHHChH-hhhhheeecccc
Confidence 001133566677777776633 34689999999999999999998885 677777766543
No 84
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.53 E-value=1.8e-13 Score=138.33 Aligned_cols=233 Identities=15% Similarity=0.163 Sum_probs=126.6
Q ss_pred CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463 499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL 578 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 578 (790)
...|.||++||.++.. ..|.. +... ++ .+|.|+.+|+||+|.+.... ...+++..+.+..+++.
T Consensus 14 ~~~~~iv~lhG~~~~~---~~~~~-~~~~-l~-~~~~vi~~D~~G~G~s~~~~---------~~~~~~~~~d~~~~l~~- 77 (255)
T PRK10673 14 HNNSPIVLVHGLFGSL---DNLGV-LARD-LV-NDHDIIQVDMRNHGLSPRDP---------VMNYPAMAQDLLDTLDA- 77 (255)
T ss_pred CCCCCEEEECCCCCch---hHHHH-HHHH-Hh-hCCeEEEECCCCCCCCCCCC---------CCCHHHHHHHHHHHHHH-
Confidence 4458899999998763 23321 2223 33 58999999999987644220 12344444444444442
Q ss_pred CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC-CCcccccccchhhhcCCCCccCchhhhhhccccchhhh
Q psy463 579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV-TDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDR 657 (790)
Q Consensus 579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 657 (790)
+...++.|+||||||.+++.++.++|+ +++++++.++. ..... . .... . +.. ...
T Consensus 78 --l~~~~~~lvGhS~Gg~va~~~a~~~~~-~v~~lvli~~~~~~~~~-~-~~~~-~------------~~~------~~~ 133 (255)
T PRK10673 78 --LQIEKATFIGHSMGGKAVMALTALAPD-RIDKLVAIDIAPVDYHV-R-RHDE-I------------FAA------INA 133 (255)
T ss_pred --cCCCceEEEEECHHHHHHHHHHHhCHh-hcceEEEEecCCCCccc-h-hhHH-H------------HHH------HHH
Confidence 234679999999999999999998875 78877776431 11100 0 0000 0 000 000
Q ss_pred ccCCcEEEEeecCCCccChhhHHHHHH-HHHhcCcc-hhcccccCCCCcCCc----chhhhhhhhhhhhhccCCccEEEE
Q psy463 658 IRDKQYLLVHGTMDDNVHFQQSMMLAK-SLQHADIM-FQSQRYMGLPTFEDN----LEGYKIAALNNKVDRIRDKQYLLV 731 (790)
Q Consensus 658 ~~~~p~l~~~g~~d~~v~~~~~~~l~~-~l~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~P~Lii 731 (790)
+. .. +. ........... .+...... +....+... .+... ...+........+.++ ++|+|++
T Consensus 134 ~~--~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i 201 (255)
T PRK10673 134 VS--EA----GA----TTRQQAAAIMRQHLNEEGVIQFLLKSFVDG-EWRFNVPVLWDQYPHIVGWEKIPAW-PHPALFI 201 (255)
T ss_pred hh--hc----cc----ccHHHHHHHHHHhcCCHHHHHHHHhcCCcc-eeEeeHHHHHHhHHHHhCCcccCCC-CCCeEEE
Confidence 00 00 00 00000000000 00000000 000000000 00000 0011111111234567 8999999
Q ss_pred ecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463 732 HGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS 787 (790)
Q Consensus 732 ~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~ 787 (790)
+|++|..++.+.++.+.+.+.. +++.++++++|.... .++.+.+.+.+||.+
T Consensus 202 ~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 202 RGGNSPYVTEAYRDDLLAQFPQ----ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred ECCCCCCCCHHHHHHHHHhCCC----cEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 9999999998888888776654 488899999998887 888899999999975
No 85
>PRK11071 esterase YqiA; Provisional
Probab=99.53 E-value=2.1e-13 Score=129.00 Aligned_cols=186 Identities=16% Similarity=0.138 Sum_probs=114.4
Q ss_pred cEEEEEcCCCCccccccccccchHHHHHhc--CCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463 502 PLLIHVYGGPSSFQVTERFSVDWNLYLADN--KDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP 579 (790)
Q Consensus 502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~--~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 579 (790)
|.||++||.+++ ...|.......++++ .+|.|+++|.+|.+ .+..+.+..+.++++
T Consensus 2 p~illlHGf~ss---~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------------~~~~~~l~~l~~~~~ 59 (190)
T PRK11071 2 STLLYLHGFNSS---PRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------------ADAAELLESLVLEHG 59 (190)
T ss_pred CeEEEECCCCCC---cchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------------HHHHHHHHHHHHHcC
Confidence 679999999887 334443333344432 37999999999842 123344555555333
Q ss_pred CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhcc
Q psy463 580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR 659 (790)
Q Consensus 580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 659 (790)
.+++.++|+||||++++.++.++|. + +++.+|..+.. .....+++.. ...+..
T Consensus 60 ---~~~~~lvG~S~Gg~~a~~~a~~~~~---~-~vl~~~~~~~~----~~~~~~~~~~-----~~~~~~----------- 112 (190)
T PRK11071 60 ---GDPLGLVGSSLGGYYATWLSQCFML---P-AVVVNPAVRPF----ELLTDYLGEN-----ENPYTG----------- 112 (190)
T ss_pred ---CCCeEEEEECHHHHHHHHHHHHcCC---C-EEEECCCCCHH----HHHHHhcCCc-----ccccCC-----------
Confidence 4689999999999999999998873 2 35566654421 0011111110 000000
Q ss_pred CCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCccc
Q psy463 660 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNV 739 (790)
Q Consensus 660 ~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v 739 (790)
.. ..-.......+....+. . +. . .+|++++||++|+.|
T Consensus 113 -~~-------------~~~~~~~~~d~~~~~~~-------------------------~-i~-~-~~~v~iihg~~De~V 150 (190)
T PRK11071 113 -QQ-------------YVLESRHIYDLKVMQID-------------------------P-LE-S-PDLIWLLQQTGDEVL 150 (190)
T ss_pred -Cc-------------EEEcHHHHHHHHhcCCc-------------------------c-CC-C-hhhEEEEEeCCCCcC
Confidence 00 00011122222211111 1 22 4 789999999999999
Q ss_pred chhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHH
Q psy463 740 HFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLD 786 (790)
Q Consensus 740 ~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~ 786 (790)
|++.+..+++.. +..+++|++|.+.. .+++.+.+.+|+.
T Consensus 151 ~~~~a~~~~~~~-------~~~~~~ggdH~f~~-~~~~~~~i~~fl~ 189 (190)
T PRK11071 151 DYRQAVAYYAAC-------RQTVEEGGNHAFVG-FERYFNQIVDFLG 189 (190)
T ss_pred CHHHHHHHHHhc-------ceEEECCCCcchhh-HHHhHHHHHHHhc
Confidence 999999999842 55688999999973 5888899999975
No 86
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.53 E-value=4e-13 Score=136.07 Aligned_cols=261 Identities=15% Similarity=0.078 Sum_probs=142.1
Q ss_pred EEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc-cchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463 472 YMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS-VDWNLYLADNKDIVVAYIDGRNSALKGNT 550 (790)
Q Consensus 472 ~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-~~~~~~~~~~~G~~v~~~d~rG~~~~g~~ 550 (790)
.+.+.. +|..+.|+++.|.+ + ..+.||++|||+.... ..+. .......++++||.|+++|++|+|.+...
T Consensus 4 ~~~~~~-~~~~l~g~~~~p~~----~--~~~~vv~i~gg~~~~~--g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~ 74 (274)
T TIGR03100 4 ALTFSC-EGETLVGVLHIPGA----S--HTTGVLIVVGGPQYRV--GSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE 74 (274)
T ss_pred eEEEEc-CCcEEEEEEEcCCC----C--CCCeEEEEeCCccccC--CchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC
Confidence 455555 67889999999964 2 2346777777764311 1111 11123445558999999999998765322
Q ss_pred hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccc-cccc
Q psy463 551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYY-DTIY 629 (790)
Q Consensus 551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~-~~~~ 629 (790)
. ..+ .....|+.++++++.+..+ ..++|+++|||+||.+++.++..+ ..++++|+.+|....... ....
T Consensus 75 ~-----~~~-~~~~~d~~~~~~~l~~~~~--g~~~i~l~G~S~Gg~~a~~~a~~~--~~v~~lil~~p~~~~~~~~~~~~ 144 (274)
T TIGR03100 75 N-----LGF-EGIDADIAAAIDAFREAAP--HLRRIVAWGLCDAASAALLYAPAD--LRVAGLVLLNPWVRTEAAQAASR 144 (274)
T ss_pred C-----CCH-HHHHHHHHHHHHHHHhhCC--CCCcEEEEEECHHHHHHHHHhhhC--CCccEEEEECCccCCcccchHHH
Confidence 1 011 1235788889998876332 236799999999999999987643 378999999886331110 0000
Q ss_pred hhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHH-HHHHHHHhcCcchhcccccCCCCcCCcc
Q psy463 630 SERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSM-MLAKSLQHADIMFQSQRYMGLPTFEDNL 708 (790)
Q Consensus 630 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 708 (790)
...+ |... .... ..+ .. +..|+.+. .+.. .+...+...... .. ....
T Consensus 145 ~~~~------------~~~~-~~~~-~~~--~~--~~~g~~~~----~~~~~~~~~~~~~~~~~-------~~---~~~~ 192 (274)
T TIGR03100 145 IRHY------------YLGQ-LLSA-DFW--RK--LLSGEVNL----GSSLRGLGDALLKARQK-------GD---EVAH 192 (274)
T ss_pred HHHH------------HHHH-HhCh-HHH--HH--hcCCCccH----HHHHHHHHHHHHhhhhc-------CC---Cccc
Confidence 0000 0000 0000 000 00 01222111 1111 111111111000 00 0000
Q ss_pred hhhhhhhhhhhhhccCCccEEEEecCCCcccchhh-----hHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHH
Q psy463 709 EGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQ-----SMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTL 781 (790)
Q Consensus 709 ~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~-----~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i 781 (790)
.. ........+..+ ++|+|+++|+.|...+.-. +....+.+.. ..++++.+|+++|.+.. .++++.+.|
T Consensus 193 ~~-~~~~~~~~l~~~-~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~--~~v~~~~~~~~~H~l~~e~~~~~v~~~i 268 (274)
T TIGR03100 193 GG-LAERMKAGLERF-QGPVLFILSGNDLTAQEFADSVLGEPAWRGALED--PGIERVEIDGADHTFSDRVWREWVAART 268 (274)
T ss_pred ch-HHHHHHHHHHhc-CCcEEEEEcCcchhHHHHHHHhccChhhHHHhhc--CCeEEEecCCCCcccccHHHHHHHHHHH
Confidence 00 111223556778 8999999999998753111 0222222322 24688999999998865 678999999
Q ss_pred HHHHHH
Q psy463 782 ERFLDS 787 (790)
Q Consensus 782 ~~fl~~ 787 (790)
.+||++
T Consensus 269 ~~wL~~ 274 (274)
T TIGR03100 269 TEWLRR 274 (274)
T ss_pred HHHHhC
Confidence 999963
No 87
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.53 E-value=6e-13 Score=137.13 Aligned_cols=255 Identities=15% Similarity=0.101 Sum_probs=129.9
Q ss_pred ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463 501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY 580 (790)
Q Consensus 501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 580 (790)
.|.||++||++++.. .|. .....++.+.||.|+.+|.||+|.+..... ......+++..+.+..+.+.
T Consensus 25 ~~~vl~~hG~~g~~~---~~~-~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~--- 92 (288)
T TIGR01250 25 KIKLLLLHGGPGMSH---EYL-ENLRELLKEEGREVIMYDQLGCGYSDQPDD-----SDELWTIDYFVDELEEVREK--- 92 (288)
T ss_pred CCeEEEEcCCCCccH---HHH-HHHHHHHHhcCCEEEEEcCCCCCCCCCCCc-----ccccccHHHHHHHHHHHHHH---
Confidence 467889999877631 111 123345554599999999999876432110 00013455666666666653
Q ss_pred cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcC-CCCccCchhhhhhccc---cc---
Q psy463 581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMG-LPTFEDNLEGYKIAAL---NN--- 653 (790)
Q Consensus 581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~---~~--- 653 (790)
.+..+++++||||||.+++.++.++|. .++.+++.+++.......... ..... .+ ............ ..
T Consensus 93 ~~~~~~~liG~S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 168 (288)
T TIGR01250 93 LGLDKFYLLGHSWGGMLAQEYALKYGQ-HLKGLIISSMLDSAPEYVKEL-NRLRKELP--PEVRAAIKRCEASGDYDNPE 168 (288)
T ss_pred cCCCcEEEEEeehHHHHHHHHHHhCcc-ccceeeEecccccchHHHHHH-HHHHhhcC--hhHHHHHHHHHhccCcchHH
Confidence 334679999999999999999998875 788888877754322110000 00000 00 000000000000 00
Q ss_pred hhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCc-chhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEe
Q psy463 654 KVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI-MFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVH 732 (790)
Q Consensus 654 ~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~ 732 (790)
....+. ..+. ........... ....+..... .... ...+...+. ....+........+.++ ++|+|+++
T Consensus 169 ~~~~~~--~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~l~~i-~~P~lii~ 238 (288)
T TIGR01250 169 YQEAVE--VFYH-HLLCRTRKWPE----ALKHLKSGMNTNVYN-IMQGPNEFT-ITGNLKDWDITDKLSEI-KVPTLLTV 238 (288)
T ss_pred HHHHHH--HHHH-HhhcccccchH----HHHHHhhccCHHHHh-cccCCcccc-ccccccccCHHHHhhcc-CCCEEEEe
Confidence 000000 0000 00000000000 0000000000 0000 000000000 00011112233556788 99999999
Q ss_pred cCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463 733 GTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD 786 (790)
Q Consensus 733 G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~ 786 (790)
|+.|. +++.....+.+.+.. +++++++++||.... .++++.+.+.+||+
T Consensus 239 G~~D~-~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 239 GEFDT-MTPEAAREMQELIAG----SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred cCCCc-cCHHHHHHHHHhccC----CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 99998 456777777665543 478899999999887 88999999999974
No 88
>PLN02872 triacylglycerol lipase
Probab=99.52 E-value=1.1e-13 Score=145.20 Aligned_cols=298 Identities=13% Similarity=0.114 Sum_probs=164.5
Q ss_pred ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc----chHHHHHhcCCeEEEEEcCCCC
Q psy463 469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV----DWNLYLADNKDIVVAYIDGRNS 544 (790)
Q Consensus 469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~----~~~~~~~~~~G~~v~~~d~rG~ 544 (790)
+.|...+++.||..+....+.+.... ....+.|+|+++||...+ ...|.. ......++++||.|+.+|.||+
T Consensus 43 ~~e~h~v~T~DGy~L~l~ri~~~~~~-~~~~~~~~Vll~HGl~~s---s~~w~~~~~~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 43 SCTEHTIQTKDGYLLALQRVSSRNPR-LGSQRGPPVLLQHGLFMA---GDAWFLNSPEQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred CceEEEEECCCCcEEEEEEcCCCCCC-CCCCCCCeEEEeCccccc---ccceeecCcccchHHHHHhCCCCccccccccc
Confidence 46778888999998887666432211 012345789999998765 233321 1233456668999999999997
Q ss_pred CCC-hhhhHh---hhh--ccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC--CceEEEEEe
Q psy463 545 ALK-GNTLKY---AGY--RRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS--NVFKCGISV 616 (790)
Q Consensus 545 ~~~-g~~~~~---~~~--~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~~v~~ 616 (790)
+.+ |..... ..+ ..+.....+|+.++++++.+ . ...++.++||||||.+++.++. +|. ..++.+++.
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~-~---~~~~v~~VGhS~Gg~~~~~~~~-~p~~~~~v~~~~~l 193 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYS-I---TNSKIFIVGHSQGTIMSLAALT-QPNVVEMVEAAALL 193 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHh-c---cCCceEEEEECHHHHHHHHHhh-ChHHHHHHHHHHHh
Confidence 632 211111 111 11222334799999999876 2 2378999999999999986654 553 246677778
Q ss_pred CCCCCcccccccchh---------h--hcCCCCccCchhhhhhccccchhhhccC------CcEEEEeecCCC----c--
Q psy463 617 APVTDWIYYDTIYSE---------R--YMGLPTFEDNLEGYKIAALNNKVDRIRD------KQYLLVHGTMDD----N-- 673 (790)
Q Consensus 617 ~~~~~~~~~~~~~~~---------~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~p~l~~~g~~d~----~-- 673 (790)
+|+..+......+.. . .+|...+......... ....+.. ..+..+.|.... +
T Consensus 194 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~ 268 (395)
T PLN02872 194 CPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVK-----LLDSICEGHMDCNDLLTSITGTNCCFNASRID 268 (395)
T ss_pred cchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHH-----HHHHHccCchhHHHHHHHHhCCCcccchhhhh
Confidence 887544321111100 0 0111100000000000 0000000 001111221100 0
Q ss_pred ---------cChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhh-hhhhhhhhhhccC-CccEEEEecCCCcccchh
Q psy463 674 ---------VHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGY-KIAALNNKVDRIR-DKQYLLVHGTMDDNVHFQ 742 (790)
Q Consensus 674 ---------v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~-~~P~Lii~G~~D~~v~~~ 742 (790)
....+-..+.+ +.+ ...|+...|.. . .+...| +...|...+++++ ++|+++++|++|..+++.
T Consensus 269 ~~~~~~pagtS~k~~~H~~Q-~~~-s~~f~~yDyg~---~-~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~ 342 (395)
T PLN02872 269 YYLEYEPHPSSVKNLRHLFQ-MIR-KGTFAHYDYGI---F-KNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVT 342 (395)
T ss_pred HHHhcCCCcchHHHHHHHHH-HHh-cCCcccCCCCc---h-hhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHH
Confidence 00111111111 111 11223333321 1 122333 2334556778884 479999999999999999
Q ss_pred hhHHHHHHHHhcCCceEEEEcCCCCCc--C-CC-cchHHHHHHHHHHHHhh
Q psy463 743 QSMMLAKSLQHADIMFQSQTYPDEEHG--L-IG-VRPHFYHTLERFLDSCF 789 (790)
Q Consensus 743 ~~~~l~~~l~~~g~~~~~~~~p~~~H~--~-~~-~~~~~~~~i~~fl~~~l 789 (790)
.+..+.+.+... .++..+|+.+|. + .. .++.+++.|++||++++
T Consensus 343 dv~~l~~~Lp~~---~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 343 DVEHTLAELPSK---PELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred HHHHHHHHCCCc---cEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 999998888642 477889999996 3 23 78889999999999875
No 89
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.52 E-value=4.1e-13 Score=127.35 Aligned_cols=129 Identities=22% Similarity=0.282 Sum_probs=91.5
Q ss_pred EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc-cchHHHHHhcCCeEEEEEcCCCC--CCChhhhHhhhhccC
Q psy463 483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS-VDWNLYLADNKDIVVAYIDGRNS--ALKGNTLKYAGYRRL 559 (790)
Q Consensus 483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-~~~~~~~~~~~G~~v~~~d~rG~--~~~g~~~~~~~~~~~ 559 (790)
|.+.+|.|++.. ..+.|+||++||..+.. +.+. ..-...++.+.||+|+.|+.... ....+.+.. .....
T Consensus 1 l~Y~lYvP~~~~---~~~~PLVv~LHG~~~~a---~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~-~~~~~ 73 (220)
T PF10503_consen 1 LSYRLYVPPGAP---RGPVPLVVVLHGCGQSA---EDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFS-DDQQR 73 (220)
T ss_pred CcEEEecCCCCC---CCCCCEEEEeCCCCCCH---HHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccc-ccccc
Confidence 457899998653 34789999999987762 2221 11123567778999999996432 122222222 22233
Q ss_pred CccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463 560 GTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT 620 (790)
Q Consensus 560 ~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~ 620 (790)
+..+...+...++++.+++ .+|++||.++|+|.||.++..++..+|+ +|+++...+++.
T Consensus 74 g~~d~~~i~~lv~~v~~~~-~iD~~RVyv~G~S~Gg~ma~~la~~~pd-~faa~a~~sG~~ 132 (220)
T PF10503_consen 74 GGGDVAFIAALVDYVAARY-NIDPSRVYVTGLSNGGMMANVLACAYPD-LFAAVAVVSGVP 132 (220)
T ss_pred CccchhhHHHHHHhHhhhc-ccCCCceeeEEECHHHHHHHHHHHhCCc-cceEEEeecccc
Confidence 4456677788899988844 5999999999999999999999999986 999888888763
No 90
>PRK07581 hypothetical protein; Validated
Probab=99.52 E-value=2.9e-13 Score=142.49 Aligned_cols=68 Identities=10% Similarity=-0.038 Sum_probs=59.6
Q ss_pred hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCC-CCCcCCC-cchHHHHHHHHHHHHhhC
Q psy463 718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPD-EEHGLIG-VRPHFYHTLERFLDSCFA 790 (790)
Q Consensus 718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~-~~H~~~~-~~~~~~~~i~~fl~~~l~ 790 (790)
..+.++ ++|+|+|+|++|..+|+..+..+.+.++. .+++++++ +||.... ..+.+.+.|.+||++.|.
T Consensus 269 ~~L~~I-~~PtLvI~G~~D~~~p~~~~~~l~~~ip~----a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 269 AALGSI-TAKTFVMPISTDLYFPPEDCEAEAALIPN----AELRPIESIWGHLAGFGQNPADIAFIDAALKELLA 338 (339)
T ss_pred HHHhcC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCC----CeEEEeCCCCCccccccCcHHHHHHHHHHHHHHHh
Confidence 567788 99999999999999999999888887755 38889998 8998887 899999999999998863
No 91
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.52 E-value=4.1e-13 Score=136.66 Aligned_cols=246 Identities=20% Similarity=0.238 Sum_probs=134.2
Q ss_pred CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC
Q psy463 467 LPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL 546 (790)
Q Consensus 467 ~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~ 546 (790)
-...+.+.++.. |.+|.|++.+|. ..++.|+||++-|.-+.+ ..+. ......++.+|++++.+|.+|.|.
T Consensus 162 ~~~i~~v~iP~e-g~~I~g~LhlP~-----~~~p~P~VIv~gGlDs~q---eD~~-~l~~~~l~~rGiA~LtvDmPG~G~ 231 (411)
T PF06500_consen 162 DYPIEEVEIPFE-GKTIPGYLHLPS-----GEKPYPTVIVCGGLDSLQ---EDLY-RLFRDYLAPRGIAMLTVDMPGQGE 231 (411)
T ss_dssp SSEEEEEEEEET-TCEEEEEEEESS-----SSS-EEEEEEE--TTS-G---GGGH-HHHHCCCHHCT-EEEEE--TTSGG
T ss_pred CCCcEEEEEeeC-CcEEEEEEEcCC-----CCCCCCEEEEeCCcchhH---HHHH-HHHHHHHHhCCCEEEEEccCCCcc
Confidence 345778888884 599999999998 357889888875543332 1211 112233455999999999999775
Q ss_pred ChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc
Q psy463 547 KGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD 626 (790)
Q Consensus 547 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~ 626 (790)
+.... ... ..-.-..++++|+.+ .+++|..||+++|.|+||+.+..+|..+++ +++++|+.+|+.+-..-+
T Consensus 232 s~~~~---l~~----D~~~l~~aVLd~L~~-~p~VD~~RV~~~G~SfGGy~AvRlA~le~~-RlkavV~~Ga~vh~~ft~ 302 (411)
T PF06500_consen 232 SPKWP---LTQ----DSSRLHQAVLDYLAS-RPWVDHTRVGAWGFSFGGYYAVRLAALEDP-RLKAVVALGAPVHHFFTD 302 (411)
T ss_dssp GTTT----S-S-----CCHHHHHHHHHHHH-STTEEEEEEEEEEETHHHHHHHHHHHHTTT-T-SEEEEES---SCGGH-
T ss_pred cccCC---CCc----CHHHHHHHHHHHHhc-CCccChhheEEEEeccchHHHHHHHHhccc-ceeeEeeeCchHhhhhcc
Confidence 32110 000 111123467888887 899999999999999999999999876654 888888887764422111
Q ss_pred ccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCC
Q psy463 627 TIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFED 706 (790)
Q Consensus 627 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 706 (790)
. +..-.. +..|... .+.++. .. ......+...+..-+.. .
T Consensus 303 ~---~~~~~~------P~my~d~----LA~rlG---------~~-----~~~~~~l~~el~~~SLk---------~---- 342 (411)
T PF06500_consen 303 P---EWQQRV------PDMYLDV----LASRLG---------MA-----AVSDESLRGELNKFSLK---------T---- 342 (411)
T ss_dssp H---HHHTTS-------HHHHHH----HHHHCT----------S-----CE-HHHHHHHGGGGSTT---------T----
T ss_pred H---HHHhcC------CHHHHHH----HHHHhC---------Cc-----cCCHHHHHHHHHhcCcc---------h----
Confidence 1 011011 1222111 111111 00 00111122222222211 0
Q ss_pred cchhhhhhhhhhhh--hccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCC-CcCCCcchHHHHHHHH
Q psy463 707 NLEGYKIAALNNKV--DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEE-HGLIGVRPHFYHTLER 783 (790)
Q Consensus 707 ~~~~~~~~~~~~~~--~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~-H~~~~~~~~~~~~i~~ 783 (790)
-..+ .+. .+|+|.+.|++|+++|.+....++.. +.+-+...+|... |. .-+..+..+.+
T Consensus 343 ----------qGlL~~rr~-~~plL~i~~~~D~v~P~eD~~lia~~----s~~gk~~~~~~~~~~~---gy~~al~~~~~ 404 (411)
T PF06500_consen 343 ----------QGLLSGRRC-PTPLLAINGEDDPVSPIEDSRLIAES----STDGKALRIPSKPLHM---GYPQALDEIYK 404 (411)
T ss_dssp ----------TTTTTSS-B-SS-EEEEEETT-SSS-HHHHHHHHHT----BTT-EEEEE-SSSHHH---HHHHHHHHHHH
T ss_pred ----------hccccCCCC-CcceEEeecCCCCCCCHHHHHHHHhc----CCCCceeecCCCcccc---chHHHHHHHHH
Confidence 0123 455 89999999999999999988776543 3334666776533 32 34578889999
Q ss_pred HHHHhh
Q psy463 784 FLDSCF 789 (790)
Q Consensus 784 fl~~~l 789 (790)
||++.|
T Consensus 405 Wl~~~l 410 (411)
T PF06500_consen 405 WLEDKL 410 (411)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 998865
No 92
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.51 E-value=1.2e-13 Score=134.82 Aligned_cols=202 Identities=22% Similarity=0.175 Sum_probs=122.8
Q ss_pred EEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC--CCc
Q psy463 504 LIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL--PYI 581 (790)
Q Consensus 504 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~--~~~ 581 (790)
||++|||++..... .....+...++.+.|+.|+.+|||-++....+ ..++|+.++++|+.++. -.+
T Consensus 1 v~~~HGGg~~~g~~-~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p-----------~~~~D~~~a~~~l~~~~~~~~~ 68 (211)
T PF07859_consen 1 VVYIHGGGWVMGSK-ESHWPFAARLAAERGFVVVSIDYRLAPEAPFP-----------AALEDVKAAYRWLLKNADKLGI 68 (211)
T ss_dssp EEEE--STTTSCGT-TTHHHHHHHHHHHHTSEEEEEE---TTTSSTT-----------HHHHHHHHHHHHHHHTHHHHTE
T ss_pred CEEECCcccccCCh-HHHHHHHHHHHhhccEEEEEeecccccccccc-----------ccccccccceeeeccccccccc
Confidence 68999999875422 22334556666668999999999987653322 55899999999999831 137
Q ss_pred CCCceEEEEechHHHHHHHHHhcCCC---CceEEEEEeCCCCCc-ccccccchhhhcCCCCccCchhhhhhccccchhhh
Q psy463 582 DKTRTAIWGWSYGGYATGLALALDPS---NVFKCGISVAPVTDW-IYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDR 657 (790)
Q Consensus 582 d~~ri~i~G~S~GG~~a~~~a~~~p~---~~~~~~v~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 657 (790)
|.++|+|+|+|.||.+++.++.+... ..++++++.+|+.++ ......+... ..+..
T Consensus 69 d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~-----------~~~~~--------- 128 (211)
T PF07859_consen 69 DPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDS-----------NENKD--------- 128 (211)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHH-----------HHHST---------
T ss_pred cccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccccccccc-----------ccccc---------
Confidence 88999999999999999988865433 258899999998766 1110000000 00000
Q ss_pred ccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhh--hhccCCccEEEEecCC
Q psy463 658 IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNK--VDRIRDKQYLLVHGTM 735 (790)
Q Consensus 658 ~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~P~Lii~G~~ 735 (790)
+...+......+.+.... +.. ... ...++... .++ -.|+++++|+.
T Consensus 129 -------------~~~~~~~~~~~~~~~~~~-~~~------~~~----------~~~sp~~~~~~~~--~Pp~~i~~g~~ 176 (211)
T PF07859_consen 129 -------------DPFLPAPKIDWFWKLYLP-GSD------RDD----------PLASPLNASDLKG--LPPTLIIHGED 176 (211)
T ss_dssp -------------TSSSBHHHHHHHHHHHHS-TGG------TTS----------TTTSGGGSSCCTT--CHEEEEEEETT
T ss_pred -------------cccccccccccccccccc-ccc------ccc----------ccccccccccccc--CCCeeeecccc
Confidence 000111111111111110 111 000 01112111 223 37999999999
Q ss_pred CcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCC
Q psy463 736 DDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLI 771 (790)
Q Consensus 736 D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~ 771 (790)
|..+ .++..+++.|++.|++++++++++..|.+.
T Consensus 177 D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 177 DVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp STTH--HHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred ccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 9765 588999999999999999999999999864
No 93
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.50 E-value=6.5e-13 Score=133.57 Aligned_cols=248 Identities=14% Similarity=0.063 Sum_probs=126.4
Q ss_pred cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHH-HHHHHHhCCC
Q psy463 502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINV-TRYLQENLPY 580 (790)
Q Consensus 502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~ 580 (790)
|+||++||.++.. ..|. .....++ .||.|+.+|.+|.|.+.... ......+++.... +..+.+.
T Consensus 2 ~~vv~~hG~~~~~---~~~~--~~~~~L~-~~~~v~~~d~~g~G~s~~~~------~~~~~~~~~~~~~~~~~~~~~--- 66 (251)
T TIGR03695 2 PVLVFLHGFLGSG---ADWQ--ALIELLG-PHFRCLAIDLPGHGSSQSPD------EIERYDFEEAAQDILATLLDQ--- 66 (251)
T ss_pred CEEEEEcCCCCch---hhHH--HHHHHhc-ccCeEEEEcCCCCCCCCCCC------ccChhhHHHHHHHHHHHHHHH---
Confidence 6799999987762 2332 2233444 79999999999987653321 1111334555544 5555542
Q ss_pred cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccC
Q psy463 581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD 660 (790)
Q Consensus 581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (790)
.+..++.++|||+||.+++.++.++|. .++++++.++...+...... ..+.... ......+..............
T Consensus 67 ~~~~~~~l~G~S~Gg~ia~~~a~~~~~-~v~~lil~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 141 (251)
T TIGR03695 67 LGIEPFFLVGYSMGGRIALYYALQYPE-RVQGLILESGSPGLATEEER-AARRQND---EQLAQRFEQEGLEAFLDDWYQ 141 (251)
T ss_pred cCCCeEEEEEeccHHHHHHHHHHhCch-heeeeEEecCCCCcCchHhh-hhhhhcc---hhhhhHHHhcCccHHHHHHhc
Confidence 345789999999999999999999885 78888887775433210000 0000000 000000000000000111100
Q ss_pred CcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccc
Q psy463 661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH 740 (790)
Q Consensus 661 ~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~ 740 (790)
.+.+... ...+......+.......... ....... .............+.++ ++|+|+++|+.|..++
T Consensus 142 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~ 209 (251)
T TIGR03695 142 QPLFASQ----KNLPPEQRQALRAKRLANNPE-GLAKMLR------ATGLGKQPSLWPKLQAL-TIPVLYLCGEKDEKFV 209 (251)
T ss_pred Cceeeec----ccCChHHhHHHHHhcccccch-HHHHHHH------HhhhhcccchHHHhhCC-CCceEEEeeCcchHHH
Confidence 1111000 001111111111110000000 0000000 00000011122446678 9999999999998653
Q ss_pred hhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463 741 FQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD 786 (790)
Q Consensus 741 ~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~ 786 (790)
...+. +.+....++++++|++||.+.. +++++.+.+.+||+
T Consensus 210 -~~~~~----~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 210 -QIAKE----MQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred -HHHHH----HHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 33333 3333345688999999999887 88899999999873
No 94
>KOG4409|consensus
Probab=99.50 E-value=5.7e-13 Score=129.71 Aligned_cols=281 Identities=14% Similarity=0.012 Sum_probs=147.3
Q ss_pred EEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhh
Q psy463 475 VPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA 554 (790)
Q Consensus 475 ~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~ 554 (790)
+...++..+.-....+. ......+|++||.+.+.+ -|.. .-.-++ ....|.++|..|.|.+.++-...
T Consensus 70 v~i~~~~~iw~~~~~~~------~~~~~plVliHGyGAg~g---~f~~--Nf~~La-~~~~vyaiDllG~G~SSRP~F~~ 137 (365)
T KOG4409|consen 70 VRIPNGIEIWTITVSNE------SANKTPLVLIHGYGAGLG---LFFR--NFDDLA-KIRNVYAIDLLGFGRSSRPKFSI 137 (365)
T ss_pred eecCCCceeEEEeeccc------ccCCCcEEEEeccchhHH---HHHH--hhhhhh-hcCceEEecccCCCCCCCCCCCC
Confidence 34445555555544443 233456789999876632 1111 112234 47899999999988766542211
Q ss_pred hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc
Q psy463 555 GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM 634 (790)
Q Consensus 555 ~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 634 (790)
+. ...-...++.++..+...+ ..|..|+|||+|||++..+|.+||+ +++-+|+++|+.-...-+ ....+.
T Consensus 138 ---d~-~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPe-rV~kLiLvsP~Gf~~~~~--~~~~~~ 207 (365)
T KOG4409|consen 138 ---DP-TTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPE-RVEKLILVSPWGFPEKPD--SEPEFT 207 (365)
T ss_pred ---Cc-ccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChH-hhceEEEecccccccCCC--cchhhc
Confidence 11 1112233344443333234 4799999999999999999999996 899999998863222100 000000
Q ss_pred CCCCccC--chhhhhhccccchhhhccC-CcEEEEeecCCCc--cChhhHHH-HHHHHHhcCcchhcccccCCCC-----
Q psy463 635 GLPTFED--NLEGYKIAALNNKVDRIRD-KQYLLVHGTMDDN--VHFQQSMM-LAKSLQHADIMFQSQRYMGLPT----- 703 (790)
Q Consensus 635 g~~~~~~--~~~~~~~~~~~~~~~~~~~-~p~l~~~g~~d~~--v~~~~~~~-l~~~l~~~~~~~~~~~~~~~~~----- 703 (790)
..+..+- ....+...+++..++.+-. .|-|+-.-..|.. ++-...++ +.+..-... ...|.
T Consensus 208 ~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n--------~~~psgE~~f 279 (365)
T KOG4409|consen 208 KPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCN--------AQNPSGETAF 279 (365)
T ss_pred CCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhc--------CCCCcHHHHH
Confidence 0000000 0001111112111111110 0101000000000 00000000 011110000 00111
Q ss_pred -cCCcchhhhhhhhhhhhhccC-CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHH
Q psy463 704 -FEDNLEGYKIAALNNKVDRIR-DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHT 780 (790)
Q Consensus 704 -~~~~~~~~~~~~~~~~~~~i~-~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~ 780 (790)
.-....+|.+...++++..++ .+|+++|+|+.|.+ ....+.++.+.+.. ..++.+++|++||.... +++.+.+.
T Consensus 280 k~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~--~~~~~~~v~~aGHhvylDnp~~Fn~~ 356 (365)
T KOG4409|consen 280 KNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMK--EYVEIIIVPGAGHHVYLDNPEFFNQI 356 (365)
T ss_pred HHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccc-cchhHHHHHHHhhc--ccceEEEecCCCceeecCCHHHHHHH
Confidence 011223455666678888883 49999999999984 55666677666633 34689999999999988 99999999
Q ss_pred HHHHHHHh
Q psy463 781 LERFLDSC 788 (790)
Q Consensus 781 i~~fl~~~ 788 (790)
+..++++.
T Consensus 357 v~~~~~~~ 364 (365)
T KOG4409|consen 357 VLEECDKV 364 (365)
T ss_pred HHHHHhcc
Confidence 99998763
No 95
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.50 E-value=1.1e-12 Score=138.47 Aligned_cols=68 Identities=22% Similarity=0.149 Sum_probs=57.7
Q ss_pred hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEE-EcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463 718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQ-TYPDEEHGLIG-VRPHFYHTLERFLD 786 (790)
Q Consensus 718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~-~~p~~~H~~~~-~~~~~~~~i~~fl~ 786 (790)
..+++| ++|+|+|+|++|..+|+..++.+.+.++.....++++ +++++||..+. .++++.+.|.+||+
T Consensus 282 ~~l~~I-~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 282 EALSRI-KAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred HHHhhC-CCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 567888 9999999999999999999999999998764444443 45789999887 88999999999974
No 96
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.50 E-value=3.5e-13 Score=144.50 Aligned_cols=240 Identities=13% Similarity=0.094 Sum_probs=130.2
Q ss_pred ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463 501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY 580 (790)
Q Consensus 501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 580 (790)
.|.||++||.++.. ..|. .....+. .+|.|+++|++|+|.+... .....+.++.+.+..+.+.
T Consensus 131 ~~~vl~~HG~~~~~---~~~~--~~~~~l~-~~~~v~~~d~~g~G~s~~~--------~~~~~~~~~~~~~~~~~~~--- 193 (371)
T PRK14875 131 GTPVVLIHGFGGDL---NNWL--FNHAALA-AGRPVIALDLPGHGASSKA--------VGAGSLDELAAAVLAFLDA--- 193 (371)
T ss_pred CCeEEEECCCCCcc---chHH--HHHHHHh-cCCEEEEEcCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHh---
Confidence 47899999987762 2333 2223344 4699999999998765321 0113456666666666653
Q ss_pred cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccC
Q psy463 581 IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRD 660 (790)
Q Consensus 581 ~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (790)
++..+++++|||+||.+++.++.++|. .++++++.+|..........+...+.... ...... ........
T Consensus 194 ~~~~~~~lvG~S~Gg~~a~~~a~~~~~-~v~~lv~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----~~~~~~~~ 263 (371)
T PRK14875 194 LGIERAHLVGHSMGGAVALRLAARAPQ-RVASLTLIAPAGLGPEINGDYIDGFVAAE----SRRELK-----PVLELLFA 263 (371)
T ss_pred cCCccEEEEeechHHHHHHHHHHhCch-heeEEEEECcCCcCcccchhHHHHhhccc----chhHHH-----HHHHHHhc
Confidence 455789999999999999999998875 78888888775322111111111110000 000000 00000000
Q ss_pred CcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccc
Q psy463 661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH 740 (790)
Q Consensus 661 ~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~ 740 (790)
.+ ..........+................... .+.. .....+....+.++ ++|+|+++|++|..+|
T Consensus 264 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~l~~i-~~Pvlii~g~~D~~vp 329 (371)
T PRK14875 264 DP---------ALVTRQMVEDLLKYKRLDGVDDALRALADA-LFAG---GRQRVDLRDRLASL-AIPVLVIWGEQDRIIP 329 (371)
T ss_pred Ch---------hhCCHHHHHHHHHHhccccHHHHHHHHHHH-hccC---cccchhHHHHHhcC-CCCEEEEEECCCCccC
Confidence 00 000000000000000000000000000000 0000 00011222456788 9999999999999999
Q ss_pred hhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463 741 FQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC 788 (790)
Q Consensus 741 ~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~ 788 (790)
+..+..+.. .+++.++|++||.... +++.+.+.|.+||+++
T Consensus 330 ~~~~~~l~~-------~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 330 AAHAQGLPD-------GVAVHVLPGAGHMPQMEAAADVNRLLAEFLGKA 371 (371)
T ss_pred HHHHhhccC-------CCeEEEeCCCCCChhhhCHHHHHHHHHHHhccC
Confidence 887655432 3588899999999887 8889999999999753
No 97
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.50 E-value=3.9e-13 Score=137.40 Aligned_cols=101 Identities=12% Similarity=0.027 Sum_probs=72.1
Q ss_pred cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463 502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI 581 (790)
Q Consensus 502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~ 581 (790)
|.||++||.+.. ...|. .....+. .+|.|+++|++|+|.++..-. ....+.++.+.+..++++.
T Consensus 35 ~~iv~lHG~~~~---~~~~~--~~~~~l~-~~~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~~~~~~~~~--- 98 (286)
T PRK03204 35 PPILLCHGNPTW---SFLYR--DIIVALR-DRFRCVAPDYLGFGLSERPSG-------FGYQIDEHARVIGEFVDHL--- 98 (286)
T ss_pred CEEEEECCCCcc---HHHHH--HHHHHHh-CCcEEEEECCCCCCCCCCCCc-------cccCHHHHHHHHHHHHHHh---
Confidence 679999998754 22232 2223444 579999999999886543210 0134677777788777743
Q ss_pred CCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463 582 DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV 619 (790)
Q Consensus 582 d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~ 619 (790)
+..++.++||||||.++..++..+|. .++.+|+.++.
T Consensus 99 ~~~~~~lvG~S~Gg~va~~~a~~~p~-~v~~lvl~~~~ 135 (286)
T PRK03204 99 GLDRYLSMGQDWGGPISMAVAVERAD-RVRGVVLGNTW 135 (286)
T ss_pred CCCCEEEEEECccHHHHHHHHHhChh-heeEEEEECcc
Confidence 45789999999999999999998886 78888876654
No 98
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.49 E-value=1.2e-12 Score=139.04 Aligned_cols=70 Identities=19% Similarity=0.156 Sum_probs=63.0
Q ss_pred hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcC-CCCCcCCC-cchHHHHHHHHHHHHh
Q psy463 718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYP-DEEHGLIG-VRPHFYHTLERFLDSC 788 (790)
Q Consensus 718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p-~~~H~~~~-~~~~~~~~i~~fl~~~ 788 (790)
..+++| ++|+|+|+|+.|..+|++.++.+.+.++..+..+++++++ ++||.... .++++.+.+.+||.++
T Consensus 303 ~~l~~I-~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 303 AALARI-KARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERA 374 (379)
T ss_pred HHHhcC-CCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhh
Confidence 567889 9999999999999999999999999999877777888775 99999887 8889999999999875
No 99
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.48 E-value=3.7e-13 Score=134.81 Aligned_cols=100 Identities=14% Similarity=-0.011 Sum_probs=69.9
Q ss_pred cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463 502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI 581 (790)
Q Consensus 502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~ 581 (790)
|.||++||.+++. ..|... ...+ .+|.|+++|+||+|.+.... ...+.+..+.+..++++.
T Consensus 3 p~vvllHG~~~~~---~~w~~~--~~~l--~~~~vi~~D~~G~G~S~~~~---------~~~~~~~~~~l~~~l~~~--- 63 (242)
T PRK11126 3 PWLVFLHGLLGSG---QDWQPV--GEAL--PDYPRLYIDLPGHGGSAAIS---------VDGFADVSRLLSQTLQSY--- 63 (242)
T ss_pred CEEEEECCCCCCh---HHHHHH--HHHc--CCCCEEEecCCCCCCCCCcc---------ccCHHHHHHHHHHHHHHc---
Confidence 6799999998872 344322 2234 37999999999988754321 113455555555555433
Q ss_pred CCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463 582 DKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT 620 (790)
Q Consensus 582 d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~ 620 (790)
+.+++.++||||||.+++.++.++++..++.+++.++..
T Consensus 64 ~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 64 NILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 357999999999999999999988765588888776543
No 100
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.48 E-value=3.4e-12 Score=136.15 Aligned_cols=68 Identities=9% Similarity=-0.008 Sum_probs=54.1
Q ss_pred hhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463 717 NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF 789 (790)
Q Consensus 717 ~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l 789 (790)
...+.++ ++|+|+++|++|.+.+ .....+.+.+ +..++++++|++||.+.. +++.+.+.+.+|++.+|
T Consensus 318 ~~~l~~I-~vP~liI~G~~D~i~~-~~~~~~~~~~---~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 318 LESASEW-KVPTTFIYGRHDWMNY-EGAVEARKRM---KVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYL 386 (402)
T ss_pred hhhcccC-CCCEEEEEeCCCCCCc-HHHHHHHHHc---CCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhc
Confidence 3557788 9999999999998664 5555554443 334689999999999887 89999999999998776
No 101
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.48 E-value=7.4e-13 Score=139.28 Aligned_cols=213 Identities=30% Similarity=0.549 Sum_probs=153.6
Q ss_pred CccceeecCCceeEeCCCCCceEEEEecCCceeEE------------------EecccCCCCCCCc------CC------
Q psy463 1 MFTEEVLSSSSALWFSPSGNNLAYASFDDNRTVIM------------------TIPFYGNPGHPSS------QY------ 50 (790)
Q Consensus 1 ~~~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~------------------~~~~~g~~~~~~~------~~------ 50 (790)
+|+|||++...++||||||++|||.+.+++.+..+ .+|..|.+++.+. ..
T Consensus 94 vyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~ 173 (353)
T PF00930_consen 94 VYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTEL 173 (353)
T ss_dssp HHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE
T ss_pred eccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEe
Confidence 58999999999999999999999999988776554 4455555543331 00
Q ss_pred --CccccCCCCccccccCCCcce--eEeeeecccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccc-cCCceEEE
Q psy463 51 --TQAINLREPVLSRVNWANESV--VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFS-SDGKKMLL 125 (790)
Q Consensus 51 --~~~~~~~~~~~~~~~w~~~~~--~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-pdg~~i~~ 125 (790)
+........+...+.|++++. .+.|++|.|+...+.+|+..++.|+.+.. +...+|++....+.|. ++|..+++
T Consensus 174 ~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~-e~~~~Wv~~~~~~~~~~~~~~~~l~ 252 (353)
T PF00930_consen 174 DPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLE-ETSDGWVDVYDPPHFLGPDGNEFLW 252 (353)
T ss_dssp ---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEE-EESSSSSSSSSEEEE-TTTSSEEEE
T ss_pred eeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEE-ecCCcceeeecccccccCCCCEEEE
Confidence 101123355567788997665 66999999999999999999988888774 4567899777777776 99999999
Q ss_pred EeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccce
Q psy463 126 ILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDH 205 (790)
Q Consensus 126 ~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (790)
.+.+++ ++|||+++.+++. .++||.|+|++..+..||++++. +||.+.. .. +...|
T Consensus 253 ~s~~~G----------~~hly~~~~~~~~------~~~lT~G~~~V~~i~~~d~~~~~-iyf~a~~-~~------p~~r~ 308 (353)
T PF00930_consen 253 ISERDG----------YRHLYLYDLDGGK------PRQLTSGDWEVTSILGWDEDNNR-IYFTANG-DN------PGERH 308 (353)
T ss_dssp EEETTS----------SEEEEEEETTSSE------EEESS-SSS-EEEEEEEECTSSE-EEEEESS-GG------TTSBE
T ss_pred EEEcCC----------CcEEEEEcccccc------eeccccCceeecccceEcCCCCE-EEEEecC-CC------CCceE
Confidence 998444 7899999998884 67999999999999999998774 5555543 22 23479
Q ss_pred eEEEecC-CcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEE
Q psy463 206 LTFIDLD-DQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVA 261 (790)
Q Consensus 206 l~~~~~~-~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~ 261 (790)
||+++++ +++ ++.|| ........+++||||+++
T Consensus 309 lY~v~~~~~~~------~~~LT-----------------~~~~~~~~~~~Spdg~y~ 342 (353)
T PF00930_consen 309 LYRVSLDSGGE------PKCLT-----------------CEDGDHYSASFSPDGKYY 342 (353)
T ss_dssp EEEEETTETTE------EEESS-----------------TTSSTTEEEEE-TTSSEE
T ss_pred EEEEEeCCCCC------eEecc-----------------CCCCCceEEEECCCCCEE
Confidence 9999999 776 66777 222212689999999943
No 102
>PLN02578 hydrolase
Probab=99.48 E-value=7.7e-13 Score=139.59 Aligned_cols=63 Identities=14% Similarity=0.158 Sum_probs=54.1
Q ss_pred hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463 718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD 786 (790)
Q Consensus 718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~ 786 (790)
..++++ ++|+|+++|++|..+|...+..+.+.++.. +++++ ++||.++. .++++.+.|.+|++
T Consensus 290 ~~l~~i-~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a----~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 290 SLLSKL-SCPLLLLWGDLDPWVGPAKAEKIKAFYPDT----TLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred HHhhcC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCC----EEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 456788 999999999999999999988888776543 77777 58999988 99999999999986
No 103
>KOG4667|consensus
Probab=99.46 E-value=1.2e-12 Score=117.20 Aligned_cols=239 Identities=18% Similarity=0.174 Sum_probs=144.6
Q ss_pred EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhh
Q psy463 471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNT 550 (790)
Q Consensus 471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~ 550 (790)
+.+.++...+..+.+.+.. .+..-++|++||.-.. .........+..+++.|+.++.+|++|.|.+...
T Consensus 11 ~~ivi~n~~ne~lvg~lh~--------tgs~e~vvlcHGfrS~---Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gs 79 (269)
T KOG4667|consen 11 QKIVIPNSRNEKLVGLLHE--------TGSTEIVVLCHGFRSH---KNAIIMKNVAKALEKEGISAFRFDFSGNGESEGS 79 (269)
T ss_pred eEEEeccCCCchhhcceec--------cCCceEEEEeeccccc---cchHHHHHHHHHHHhcCceEEEEEecCCCCcCCc
Confidence 3455555556666654432 3344689999998665 2222233344556678999999999998887666
Q ss_pred hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc----
Q psy463 551 LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD---- 626 (790)
Q Consensus 551 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~---- 626 (790)
|....++ .+++|+...++++.. .++.--+|+|||-||.+++.++.++++ +.-++.++|-.+.....
T Consensus 80 f~~Gn~~----~eadDL~sV~q~~s~----~nr~v~vi~gHSkGg~Vvl~ya~K~~d--~~~viNcsGRydl~~~I~eRl 149 (269)
T KOG4667|consen 80 FYYGNYN----TEADDLHSVIQYFSN----SNRVVPVILGHSKGGDVVLLYASKYHD--IRNVINCSGRYDLKNGINERL 149 (269)
T ss_pred cccCccc----chHHHHHHHHHHhcc----CceEEEEEEeecCccHHHHHHHHhhcC--chheEEcccccchhcchhhhh
Confidence 5443332 456898888888765 334445799999999999999998874 55666666655543221
Q ss_pred -ccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcC
Q psy463 627 -TIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFE 705 (790)
Q Consensus 627 -~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 705 (790)
..+.++.+ ..++....+ ..|.-.+++.... +.+.|.. +..
T Consensus 150 g~~~l~~ik--------e~Gfid~~~--------------rkG~y~~rvt~eS---lmdrLnt-d~h------------- 190 (269)
T KOG4667|consen 150 GEDYLERIK--------EQGFIDVGP--------------RKGKYGYRVTEES---LMDRLNT-DIH------------- 190 (269)
T ss_pred cccHHHHHH--------hCCceecCc--------------ccCCcCceecHHH---HHHHHhc-hhh-------------
Confidence 11111111 000100000 0011111221111 1111111 000
Q ss_pred CcchhhhhhhhhhhhhccC-CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHH
Q psy463 706 DNLEGYKIAALNNKVDRIR-DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERF 784 (790)
Q Consensus 706 ~~~~~~~~~~~~~~~~~i~-~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~f 784 (790)
..-.+|+ +||+|-+||..|.+||.+.+.++++.++.. ++.++||++|.+.....++......|
T Consensus 191 ------------~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH----~L~iIEgADHnyt~~q~~l~~lgl~f 254 (269)
T KOG4667|consen 191 ------------EACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNH----KLEIIEGADHNYTGHQSQLVSLGLEF 254 (269)
T ss_pred ------------hhhcCcCccCceEEEeccCCceeechhHHHHHHhccCC----ceEEecCCCcCccchhhhHhhhccee
Confidence 1111232 799999999999999999999999998874 89999999999987555555554444
Q ss_pred H
Q psy463 785 L 785 (790)
Q Consensus 785 l 785 (790)
+
T Consensus 255 ~ 255 (269)
T KOG4667|consen 255 I 255 (269)
T ss_pred E
Confidence 3
No 104
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.46 E-value=3e-13 Score=134.83 Aligned_cols=144 Identities=19% Similarity=0.280 Sum_probs=87.9
Q ss_pred ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccc-----------cccccc--cchHHHHHhcCCeE
Q psy463 469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQ-----------VTERFS--VDWNLYLADNKDIV 535 (790)
Q Consensus 469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~-----------~~~~~~--~~~~~~~~~~~G~~ 535 (790)
..|.+.|...++..+.++++.|.+ ..++.|+||.+||-.+... +.+.+. .......++++||+
T Consensus 87 ~~EKv~f~~~p~~~vpaylLvPd~----~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYV 162 (390)
T PF12715_consen 87 TREKVEFNTTPGSRVPAYLLVPDG----AKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYV 162 (390)
T ss_dssp EEEEEEE--STTB-EEEEEEEETT------S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSE
T ss_pred EEEEEEEEccCCeeEEEEEEecCC----CCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCE
Confidence 456778888889999999999986 3578999999998544310 001111 01122345569999
Q ss_pred EEEEcCCCCCCChhhh------------H----hhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHH
Q psy463 536 VAYIDGRNSALKGNTL------------K----YAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATG 599 (790)
Q Consensus 536 v~~~d~rG~~~~g~~~------------~----~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~ 599 (790)
|+++|.+|-|..+..- . .....++......|...+++||.+ ++.+|++||+++|+||||+.++
T Consensus 163 vla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~s-lpeVD~~RIG~~GfSmGg~~a~ 241 (390)
T PF12715_consen 163 VLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLAS-LPEVDPDRIGCMGFSMGGYRAW 241 (390)
T ss_dssp EEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT--TTEEEEEEEEEEEGGGHHHHH
T ss_pred EEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhc-CcccCccceEEEeecccHHHHH
Confidence 9999998866543210 0 001123333456777789999998 9999999999999999999999
Q ss_pred HHHhcCCCCceEEEEEeCCC
Q psy463 600 LALALDPSNVFKCGISVAPV 619 (790)
Q Consensus 600 ~~a~~~p~~~~~~~v~~~~~ 619 (790)
++++.++ ++++.++.+-+
T Consensus 242 ~LaALDd--RIka~v~~~~l 259 (390)
T PF12715_consen 242 WLAALDD--RIKATVANGYL 259 (390)
T ss_dssp HHHHH-T--T--EEEEES-B
T ss_pred HHHHcch--hhHhHhhhhhh
Confidence 9999764 78887776654
No 105
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.45 E-value=1.8e-12 Score=121.70 Aligned_cols=179 Identities=18% Similarity=0.223 Sum_probs=123.3
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCc-cEEEEEcCCCCccccccccccc-----hHHHHHhcCCeEEEEEcCCCCCCChhhh
Q psy463 478 QPNMEAQVKLFLPPGIDTSGHKKY-PLLIHVYGGPSSFQVTERFSVD-----WNLYLADNKDIVVAYIDGRNSALKGNTL 551 (790)
Q Consensus 478 ~dg~~i~~~~~~P~~~~~~~~~~~-p~vv~~HG~~~~~~~~~~~~~~-----~~~~~~~~~G~~v~~~d~rG~~~~g~~~ 551 (790)
..|.++.+.+|.|+++. +.++| |+++++||++.... +..... -.....-+.++-|++|.|-- -|
T Consensus 169 ~tgneLkYrly~Pkdy~--pdkky~PLvlfLHgagq~g~--dn~~~l~sg~gaiawa~pedqcfVlAPQy~~------if 238 (387)
T COG4099 169 STGNELKYRLYTPKDYA--PDKKYYPLVLFLHGAGQGGS--DNDKVLSSGIGAIAWAGPEDQCFVLAPQYNP------IF 238 (387)
T ss_pred ccCceeeEEEecccccC--CCCccccEEEEEecCCCCCc--hhhhhhhcCccceeeecccCceEEEcccccc------cc
Confidence 35889999999999998 88887 99999999876521 111100 00011112345566666421 01
Q ss_pred HhhhhccCCccchhHHHHHHH-HHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccch
Q psy463 552 KYAGYRRLGTVEIYDQINVTR-YLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYS 630 (790)
Q Consensus 552 ~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~ 630 (790)
.+.. ...........+.++ -+.+ ...+|.+||.++|.|+||+.++.++.++|+ .|++++.++|--+.
T Consensus 239 ~d~e--~~t~~~l~~~idli~~vlas-~ynID~sRIYviGlSrG~~gt~al~~kfPd-fFAaa~~iaG~~d~-------- 306 (387)
T COG4099 239 ADSE--EKTLLYLIEKIDLILEVLAS-TYNIDRSRIYVIGLSRGGFGTWALAEKFPD-FFAAAVPIAGGGDR-------- 306 (387)
T ss_pred cccc--cccchhHHHHHHHHHHHHhh-ccCcccceEEEEeecCcchhhHHHHHhCch-hhheeeeecCCCch--------
Confidence 1100 011123444555565 4445 566999999999999999999999999996 99999988873110
Q ss_pred hhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchh
Q psy463 631 ERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG 710 (790)
Q Consensus 631 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 710 (790)
.
T Consensus 307 ------------v------------------------------------------------------------------- 307 (387)
T COG4099 307 ------------V------------------------------------------------------------------- 307 (387)
T ss_pred ------------h-------------------------------------------------------------------
Confidence 0
Q ss_pred hhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcC
Q psy463 711 YKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYP 764 (790)
Q Consensus 711 ~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p 764 (790)
..++.+++.|+.++|+..|.++|.++++.+++.|+..+.++++..|.
T Consensus 308 -------~lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 308 -------YLVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred -------hhhhhhccCceEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 22333447899999999999999999999999999998888777665
No 106
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.45 E-value=5.8e-13 Score=131.73 Aligned_cols=221 Identities=17% Similarity=0.102 Sum_probs=124.3
Q ss_pred EEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCC
Q psy463 504 LIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDK 583 (790)
Q Consensus 504 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~ 583 (790)
||++||.+++. ..|.. +.. .++ +||.|+++|+||.|.+..... .....+++..+.+..+++..+ .
T Consensus 1 vv~~hG~~~~~---~~~~~-~~~-~l~-~~~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~~~l~~~l~~~~---~ 65 (228)
T PF12697_consen 1 VVFLHGFGGSS---ESWDP-LAE-ALA-RGYRVIAFDLPGHGRSDPPPD------YSPYSIEDYAEDLAELLDALG---I 65 (228)
T ss_dssp EEEE-STTTTG---GGGHH-HHH-HHH-TTSEEEEEECTTSTTSSSHSS------GSGGSHHHHHHHHHHHHHHTT---T
T ss_pred eEEECCCCCCH---HHHHH-HHH-HHh-CCCEEEEEecCCccccccccc------cCCcchhhhhhhhhhcccccc---c
Confidence 68999998873 33332 333 445 799999999999876543311 112345555555555555344 3
Q ss_pred CceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccccc--c---cchhhhcCCCCccCchhhhhhccccchhhhc
Q psy463 584 TRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYD--T---IYSERYMGLPTFEDNLEGYKIAALNNKVDRI 658 (790)
Q Consensus 584 ~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~--~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 658 (790)
.++.++|||+||.+++.++.++|+ .++++++.+|........ . .+....+... ......+..... ....
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~ 139 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLAARYPD-RVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWR--SRSLRRLASRFF---YRWF 139 (228)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSGG-GEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHH--HHHHHHHHHHHH---HHHH
T ss_pred cccccccccccccccccccccccc-ccccceeecccccccccccccccchhhhhhhhcc--cccccccccccc---cccc
Confidence 789999999999999999999886 899999999887543211 0 0000000000 000000000000 0000
Q ss_pred cCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463 659 RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN 738 (790)
Q Consensus 659 ~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~ 738 (790)
.. .............+.+.+... .....+...+.++ ++|+|+++|+.|..
T Consensus 140 ~~--------~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~-~~pvl~i~g~~D~~ 189 (228)
T PF12697_consen 140 DG--------DEPEDLIRSSRRALAEYLRSN---------------------LWQADLSEALPRI-KVPVLVIHGEDDPI 189 (228)
T ss_dssp TH--------HHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHGS-SSEEEEEEETTSSS
T ss_pred cc--------ccccccccccccccccccccc---------------------ccccccccccccc-CCCeEEeecCCCCC
Confidence 00 000000000000000000000 1122233667888 99999999999999
Q ss_pred cchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHH
Q psy463 739 VHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYH 779 (790)
Q Consensus 739 v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~ 779 (790)
++.+..+.+.+.+. .++++++|+++|.+.. +++++.+
T Consensus 190 ~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~p~~~~~ 227 (228)
T PF12697_consen 190 VPPESAEELADKLP----NAELVVIPGAGHFLFLEQPDEVAE 227 (228)
T ss_dssp SHHHHHHHHHHHST----TEEEEEETTSSSTHHHHSHHHHHH
T ss_pred CCHHHHHHHHHHCC----CCEEEEECCCCCccHHHCHHHHhc
Confidence 99777777776654 4599999999999876 5555543
No 107
>COG0400 Predicted esterase [General function prediction only]
Probab=99.44 E-value=3.4e-12 Score=119.71 Aligned_cols=185 Identities=17% Similarity=0.138 Sum_probs=123.7
Q ss_pred CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccc-------hhHHHHH
Q psy463 498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVE-------IYDQINV 570 (790)
Q Consensus 498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~-------~~D~~~~ 570 (790)
....|+||++||.+++. ..+.. +....+. .+.++.+..+-.-..+..|. .....+..+ ...+.+.
T Consensus 15 ~p~~~~iilLHG~Ggde---~~~~~-~~~~~~P--~~~~is~rG~v~~~g~~~~f--~~~~~~~~d~edl~~~~~~~~~~ 86 (207)
T COG0400 15 DPAAPLLILLHGLGGDE---LDLVP-LPELILP--NATLVSPRGPVAENGGPRFF--RRYDEGSFDQEDLDLETEKLAEF 86 (207)
T ss_pred CCCCcEEEEEecCCCCh---hhhhh-hhhhcCC--CCeEEcCCCCccccCcccce--eecCCCccchhhHHHHHHHHHHH
Confidence 44568999999987652 22222 2223332 35555554332111111111 001111122 3334455
Q ss_pred HHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhcc
Q psy463 571 TRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAA 650 (790)
Q Consensus 571 ~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 650 (790)
++.+.++++ +|.+|++++|+|.|+.+++.+..++|. .++++++.+|..-...
T Consensus 87 l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~~~~-~~~~ail~~g~~~~~~-------------------------- 138 (207)
T COG0400 87 LEELAEEYG-IDSSRIILIGFSQGANIALSLGLTLPG-LFAGAILFSGMLPLEP-------------------------- 138 (207)
T ss_pred HHHHHHHhC-CChhheEEEecChHHHHHHHHHHhCch-hhccchhcCCcCCCCC--------------------------
Confidence 555555455 889999999999999999999999885 8888888888532210
Q ss_pred ccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEE
Q psy463 651 LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLL 730 (790)
Q Consensus 651 ~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Li 730 (790)
....+.+.+|+|+
T Consensus 139 -------------------------------------------------------------------~~~~~~~~~pill 151 (207)
T COG0400 139 -------------------------------------------------------------------ELLPDLAGTPILL 151 (207)
T ss_pred -------------------------------------------------------------------ccccccCCCeEEE
Confidence 0011122789999
Q ss_pred EecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463 731 VHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF 789 (790)
Q Consensus 731 i~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l 789 (790)
+||+.|++||...+.++.+.|...|.++++..++ .||.+. .+.++.+..|+...+
T Consensus 152 ~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~---~e~~~~~~~wl~~~~ 206 (207)
T COG0400 152 SHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIP---PEELEAARSWLANTL 206 (207)
T ss_pred eccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCC---HHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999 799985 477788888988764
No 108
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.44 E-value=8.7e-12 Score=126.14 Aligned_cols=247 Identities=15% Similarity=0.110 Sum_probs=125.8
Q ss_pred CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463 499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL 578 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 578 (790)
+..|.||++||..+.. ..|. .....+++.||.|+++|++|++.+... . .....+++..+.+..++++.
T Consensus 16 ~~~p~vvliHG~~~~~---~~w~--~~~~~L~~~g~~vi~~dl~g~G~s~~~---~----~~~~~~~~~~~~l~~~i~~l 83 (273)
T PLN02211 16 RQPPHFVLIHGISGGS---WCWY--KIRCLMENSGYKVTCIDLKSAGIDQSD---A----DSVTTFDEYNKPLIDFLSSL 83 (273)
T ss_pred CCCCeEEEECCCCCCc---CcHH--HHHHHHHhCCCEEEEecccCCCCCCCC---c----ccCCCHHHHHHHHHHHHHhc
Confidence 3458899999987662 2232 233455557999999999997753211 0 01133455554454444423
Q ss_pred CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccch-hhh
Q psy463 579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK-VDR 657 (790)
Q Consensus 579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~ 657 (790)
. ...++.++||||||.++..++.++|. .++.+|..++......+.. ......+.+. ............ ...
T Consensus 84 ~--~~~~v~lvGhS~GG~v~~~~a~~~p~-~v~~lv~~~~~~~~~g~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~ 155 (273)
T PLN02211 84 P--ENEKVILVGHSAGGLSVTQAIHRFPK-KICLAVYVAATMLKLGFQT-DEDMKDGVPD----LSEFGDVYELGFGLGP 155 (273)
T ss_pred C--CCCCEEEEEECchHHHHHHHHHhChh-heeEEEEeccccCCCCCCH-HHHHhccccc----hhhhccceeeeeccCC
Confidence 2 23789999999999999999988875 7888887765322111000 0000000000 000000000000 000
Q ss_pred ccCCcEEEEeec-----CCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEe
Q psy463 658 IRDKQYLLVHGT-----MDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVH 732 (790)
Q Consensus 658 ~~~~p~l~~~g~-----~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~ 732 (790)
........+..+ .-...+..........+..... .............++.++|+|+|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~vP~l~I~ 218 (273)
T PLN02211 156 DQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPI-----------------LALRSARFEEETGDIDKVPRVYIK 218 (273)
T ss_pred CCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCc-----------------cccccccccccccccCccceEEEE
Confidence 000000000000 0000011111101000000000 000000000112233368999999
Q ss_pred cCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463 733 GTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS 787 (790)
Q Consensus 733 G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~ 787 (790)
|++|..+|++..+.+.+.+... +++.++ +||..+. .++++...|.++...
T Consensus 219 g~~D~~ip~~~~~~m~~~~~~~----~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 219 TLHDHVVKPEQQEAMIKRWPPS----QVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred eCCCCCCCHHHHHHHHHhCCcc----EEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 9999999999999998876533 677886 7999887 888888888877654
No 109
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.44 E-value=1.4e-10 Score=115.40 Aligned_cols=127 Identities=13% Similarity=0.195 Sum_probs=90.0
Q ss_pred EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463 273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL 352 (790)
Q Consensus 273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l 352 (790)
|-+++..+++.+++-..- +.......|||||.++ +++ . .-+||++|+++|+ ++.+
T Consensus 384 l~iyd~~~~e~kr~e~~l------g~I~av~vs~dGK~~v-vaN----d--------r~el~vididngn------v~~i 438 (668)
T COG4946 384 LGIYDKDGGEVKRIEKDL------GNIEAVKVSPDGKKVV-VAN----D--------RFELWVIDIDNGN------VRLI 438 (668)
T ss_pred EEEEecCCceEEEeeCCc------cceEEEEEcCCCcEEE-EEc----C--------ceEEEEEEecCCC------eeEe
Confidence 555666666655443321 1234678899999887 443 2 3489999999998 8888
Q ss_pred cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463 353 TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI 432 (790)
Q Consensus 353 t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~ 432 (790)
.+........+.|+|++++|+|.--.+- -.++|-.++.++ ++.-.+|. ......+++|.|||++++|-..
T Consensus 439 dkS~~~lItdf~~~~nsr~iAYafP~gy-~tq~Iklydm~~--~Kiy~vTT-------~ta~DfsPaFD~d~ryLYfLs~ 508 (668)
T COG4946 439 DKSEYGLITDFDWHPNSRWIAYAFPEGY-YTQSIKLYDMDG--GKIYDVTT-------PTAYDFSPAFDPDGRYLYFLSA 508 (668)
T ss_pred cccccceeEEEEEcCCceeEEEecCcce-eeeeEEEEecCC--CeEEEecC-------CcccccCcccCCCCcEEEEEec
Confidence 7766655545899999999998765532 236777778877 67666665 3456678999999999998765
Q ss_pred cC
Q psy463 433 GP 434 (790)
Q Consensus 433 ~~ 434 (790)
+.
T Consensus 509 Rs 510 (668)
T COG4946 509 RS 510 (668)
T ss_pred cc
Confidence 44
No 110
>PLN00021 chlorophyllase
Probab=99.42 E-value=7.2e-12 Score=127.46 Aligned_cols=120 Identities=22% Similarity=0.159 Sum_probs=83.6
Q ss_pred cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCC
Q psy463 481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLG 560 (790)
Q Consensus 481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~ 560 (790)
..+.+.++.|.. .+.+|+||++||+.... ..|. .....++++||.|+++|++|.+..+.
T Consensus 37 ~~~p~~v~~P~~-----~g~~PvVv~lHG~~~~~---~~y~--~l~~~Las~G~~VvapD~~g~~~~~~----------- 95 (313)
T PLN00021 37 PPKPLLVATPSE-----AGTYPVLLFLHGYLLYN---SFYS--QLLQHIASHGFIVVAPQLYTLAGPDG----------- 95 (313)
T ss_pred CCceEEEEeCCC-----CCCCCEEEEECCCCCCc---ccHH--HHHHHHHhCCCEEEEecCCCcCCCCc-----------
Confidence 457788899973 56789999999987652 2222 23334556899999999987432111
Q ss_pred ccchhHHHHHHHHHHHhC-------CCcCCCceEEEEechHHHHHHHHHhcCCC----CceEEEEEeCCCCC
Q psy463 561 TVEIYDQINVTRYLQENL-------PYIDKTRTAIWGWSYGGYATGLALALDPS----NVFKCGISVAPVTD 621 (790)
Q Consensus 561 ~~~~~D~~~~~~~l~~~~-------~~~d~~ri~i~G~S~GG~~a~~~a~~~p~----~~~~~~v~~~~~~~ 621 (790)
...+++..++++|+.+.. ..+|.++++|+|||+||.+++.++..++. ..++++++..|+..
T Consensus 96 ~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 96 TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 123556666677766421 23567899999999999999999987764 25778888888643
No 111
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.42 E-value=5.1e-12 Score=132.45 Aligned_cols=263 Identities=11% Similarity=0.022 Sum_probs=136.8
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463 479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR 558 (790)
Q Consensus 479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 558 (790)
+|.++++.... ....|.||++||.+.. ...|.. ....++ .+|.|+++|++|+|.+...... .
T Consensus 113 ~~~~~~y~~~G--------~~~~~~ivllHG~~~~---~~~w~~--~~~~L~-~~~~Via~DlpG~G~S~~p~~~----~ 174 (383)
T PLN03084 113 DLFRWFCVESG--------SNNNPPVLLIHGFPSQ---AYSYRK--VLPVLS-KNYHAIAFDWLGFGFSDKPQPG----Y 174 (383)
T ss_pred CceEEEEEecC--------CCCCCeEEEECCCCCC---HHHHHH--HHHHHh-cCCEEEEECCCCCCCCCCCccc----c
Confidence 66666644331 2234789999999876 233432 223444 5899999999998765432110 0
Q ss_pred CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc--cccc---chhhh
Q psy463 559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY--YDTI---YSERY 633 (790)
Q Consensus 559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~--~~~~---~~~~~ 633 (790)
.....+.++.+.+..+++.. ..+++.|+|||+||.+++.++.++|. +++.+|+.++...... .... +....
T Consensus 175 ~~~ys~~~~a~~l~~~i~~l---~~~~~~LvG~s~GG~ia~~~a~~~P~-~v~~lILi~~~~~~~~~~~p~~l~~~~~~l 250 (383)
T PLN03084 175 GFNYTLDEYVSSLESLIDEL---KSDKVSLVVQGYFSPPVVKYASAHPD-KIKKLILLNPPLTKEHAKLPSTLSEFSNFL 250 (383)
T ss_pred cccCCHHHHHHHHHHHHHHh---CCCCceEEEECHHHHHHHHHHHhChH-hhcEEEEECCCCccccccchHHHHHHHHHH
Confidence 01234666666666666533 34689999999999999999998885 7888888887532110 0000 00000
Q ss_pred cCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCc-chhcccccCCCCcCCcchhhh
Q psy463 634 MGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI-MFQSQRYMGLPTFEDNLEGYK 712 (790)
Q Consensus 634 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 712 (790)
++. .+. ..+...... . +. ..................+...+. .......... .......+.
T Consensus 251 ~~~--------~~~-~~~~~~~~~----~-~~--~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~--~~~~l~~~~ 312 (383)
T PLN03084 251 LGE--------IFS-QDPLRASDK----A-LT--SCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRS--MKKELKKYI 312 (383)
T ss_pred hhh--------hhh-cchHHHHhh----h-hc--ccCccCCCHHHHHHHhccccCCcchHHHHHHHHHH--hhcccchhh
Confidence 000 000 000000000 0 00 000000000000000000000000 0000000000 000000000
Q ss_pred -hhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463 713 -IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS 787 (790)
Q Consensus 713 -~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~ 787 (790)
.........++ ++|+|+++|+.|..++.+.++++.+.. +.++.++|+++|.++. .++++.+.|.+||.+
T Consensus 313 ~~l~~~l~~~~i-~vPvLiI~G~~D~~v~~~~~~~~a~~~-----~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 313 EEMRSILTDKNW-KTPITVCWGLRDRWLNYDGVEDFCKSS-----QHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred HHHHhhhccccC-CCCEEEEeeCCCCCcCHHHHHHHHHhc-----CCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 00000011357 899999999999999988877776642 3488999999999998 899999999999863
No 112
>KOG1838|consensus
Probab=99.41 E-value=3e-11 Score=122.11 Aligned_cols=282 Identities=16% Similarity=0.091 Sum_probs=160.5
Q ss_pred eEEEEEEcCCCcEEEEEEEeCCCCCC-CCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463 470 VEYMSVPIQPNMEAQVKLFLPPGIDT-SGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG 548 (790)
Q Consensus 470 ~~~~~~~~~dg~~i~~~~~~P~~~~~-~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g 548 (790)
-+..-++.+||-.+...++.+....+ ......|+||++||..++. .+.+.-.+ ...+.+.||.|+++|.||.++..
T Consensus 93 y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S--~~~YVr~l-v~~a~~~G~r~VVfN~RG~~g~~ 169 (409)
T KOG1838|consen 93 YTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGS--HESYVRHL-VHEAQRKGYRVVVFNHRGLGGSK 169 (409)
T ss_pred ceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCC--hhHHHHHH-HHHHHhCCcEEEEECCCCCCCCc
Confidence 34456677788888887776665320 0124679999999988874 23333223 33445689999999999976533
Q ss_pred hhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC--ceEEEEEeCCCCCccccc
Q psy463 549 NTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN--VFKCGISVAPVTDWIYYD 626 (790)
Q Consensus 549 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~--~~~~~v~~~~~~~~~~~~ 626 (790)
-. ..+-+-....+|+..+++++..++| ..++..+|.||||.+...++.+..++ ..+|++..+|+.-...
T Consensus 170 Lt----Tpr~f~ag~t~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~-- 240 (409)
T KOG1838|consen 170 LT----TPRLFTAGWTEDLREVVNHIKKRYP---QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAA-- 240 (409)
T ss_pred cC----CCceeecCCHHHHHHHHHHHHHhCC---CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhh--
Confidence 21 1122233457899999999999777 36899999999999998888765532 3445555556432210
Q ss_pred ccchhhhcCCCCccCchhhhhhc---cccchhhhccCCcEEEEeecCCCc-cChhhHHHHHHHHHhcCcchhcccccCCC
Q psy463 627 TIYSERYMGLPTFEDNLEGYKIA---ALNNKVDRIRDKQYLLVHGTMDDN-VHFQQSMMLAKSLQHADIMFQSQRYMGLP 702 (790)
Q Consensus 627 ~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~p~l~~~g~~d~~-v~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 702 (790)
.+.+..+ .....|... ++.+.+..- .+.++- -..|.. +....+.+-++.... ....
T Consensus 241 ----~~~~~~~---~~~~~y~~~l~~~l~~~~~~~--r~~~~~-~~vd~d~~~~~~SvreFD~~~t----------~~~~ 300 (409)
T KOG1838|consen 241 ----SRSIETP---LYRRFYNRALTLNLKRIVLRH--RHTLFE-DPVDFDVILKSRSVREFDEALT----------RPMF 300 (409)
T ss_pred ----hhHHhcc---cchHHHHHHHHHhHHHHHhhh--hhhhhh-ccchhhhhhhcCcHHHHHhhhh----------hhhc
Confidence 0111000 001111111 000000000 010000 001111 111111111111111 1112
Q ss_pred CcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-----cchHH
Q psy463 703 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-----VRPHF 777 (790)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-----~~~~~ 777 (790)
.++....+|++.+..+++++| ++|+|.|+...|+++|.. +.-..+... ...+-+++-.-.||--.. +...+
T Consensus 301 gf~~~deYY~~aSs~~~v~~I-~VP~L~ina~DDPv~p~~-~ip~~~~~~--np~v~l~~T~~GGHlgfleg~~p~~~~w 376 (409)
T KOG1838|consen 301 GFKSVDEYYKKASSSNYVDKI-KVPLLCINAADDPVVPEE-AIPIDDIKS--NPNVLLVITSHGGHLGFLEGLWPSARTW 376 (409)
T ss_pred CCCcHHHHHhhcchhhhcccc-cccEEEEecCCCCCCCcc-cCCHHHHhc--CCcEEEEEeCCCceeeeeccCCCccchh
Confidence 355677899999999999999 999999999999999975 222222222 335566666667884332 45566
Q ss_pred HHH-HHHHHHH
Q psy463 778 YHT-LERFLDS 787 (790)
Q Consensus 778 ~~~-i~~fl~~ 787 (790)
++. +.+|+.+
T Consensus 377 ~~~~l~ef~~~ 387 (409)
T KOG1838|consen 377 MDKLLVEFLGN 387 (409)
T ss_pred HHHHHHHHHHH
Confidence 666 7777765
No 113
>KOG1454|consensus
Probab=99.40 E-value=9.2e-12 Score=127.46 Aligned_cols=256 Identities=15% Similarity=0.064 Sum_probs=133.5
Q ss_pred CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463 499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL 578 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 578 (790)
...|.|+++||+..+ ...|... ...+....|+.|+++|..|.|.++.. ..+. .+.+.+....+..+....
T Consensus 56 ~~~~pvlllHGF~~~---~~~w~~~-~~~L~~~~~~~v~aiDl~G~g~~s~~----~~~~--~y~~~~~v~~i~~~~~~~ 125 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGAS---SFSWRRV-VPLLSKAKGLRVLAIDLPGHGYSSPL----PRGP--LYTLRELVELIRRFVKEV 125 (326)
T ss_pred CCCCcEEEeccccCC---cccHhhh-ccccccccceEEEEEecCCCCcCCCC----CCCC--ceehhHHHHHHHHHHHhh
Confidence 456889999998875 2333321 11222233699999999996632221 1111 144555555555544422
Q ss_pred CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEE---EeCCCCCcccccccchhhhcCCCCccCchhhhhhccc----
Q psy463 579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGI---SVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAAL---- 651 (790)
Q Consensus 579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---- 651 (790)
. ..++.++|||+||.+|..+|..+|+ .++.++ ..++...............+... ...........+
T Consensus 126 ~---~~~~~lvghS~Gg~va~~~Aa~~P~-~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~ 199 (326)
T KOG1454|consen 126 F---VEPVSLVGHSLGGIVALKAAAYYPE-TVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKF--LSALELLIPLSLTEPV 199 (326)
T ss_pred c---CcceEEEEeCcHHHHHHHHHHhCcc-cccceeeecccccccccCCcchhHHHHhhhhh--ccHhhhcCccccccch
Confidence 2 3569999999999999999999986 777777 34433222111101111111000 000000000000
Q ss_pred cchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCc----chhhh--hhhhhhhhhccCC
Q psy463 652 NNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDN----LEGYK--IAALNNKVDRIRD 725 (790)
Q Consensus 652 ~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~i~~ 725 (790)
......+. ..+.. ...|..+..+....+. .. .. ....+.+. ..... .......+.++.+
T Consensus 200 ~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~---~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 264 (326)
T KOG1454|consen 200 RLVSEGLL-RCLKV--VYTDPSRLLEKLLHLL---SR-PV--------KEHFHRDARLSLFLELLGFDENLLSLIKKIWK 264 (326)
T ss_pred hheeHhhh-cceee--eccccccchhhhhhhe---ec-cc--------ccchhhhheeeEEEeccCccchHHHhhccccC
Confidence 00000000 00000 0001111111000000 00 00 00000000 00000 1223355667734
Q ss_pred ccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463 726 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF 789 (790)
Q Consensus 726 ~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l 789 (790)
+|+|+++|.+|..+|.+.+..+.+.+. .+++.+++++||..+. .++++.+.|..|+..+.
T Consensus 265 ~pvlii~G~~D~~~p~~~~~~~~~~~p----n~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 265 CPVLIIWGDKDQIVPLELAEELKKKLP----NAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred CceEEEEcCcCCccCHHHHHHHHhhCC----CceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 999999999999999998888777663 4599999999999998 89999999999998764
No 114
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.40 E-value=5e-12 Score=133.00 Aligned_cols=65 Identities=17% Similarity=0.028 Sum_probs=56.2
Q ss_pred hhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCC-CCCcCCC-cchHHHHHHHHHHHHh
Q psy463 720 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPD-EEHGLIG-VRPHFYHTLERFLDSC 788 (790)
Q Consensus 720 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~-~~H~~~~-~~~~~~~~i~~fl~~~ 788 (790)
+.++ ++|+|+++|++|..+|+..+.++.+.+.. ..+++++++ +||.... .++.+.+.+.+||.++
T Consensus 273 l~~I-~~PtLvi~G~~D~~~p~~~~~~~~~~i~p---~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 273 PEAI-RVPTVVVAVEGDRLVPLADLVELAEGLGP---RGSLRVLRSPYGHDAFLKETDRIDAILTTALRST 339 (343)
T ss_pred hhcC-CCCeEEEEeCCCEeeCHHHHHHHHHHcCC---CCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhc
Confidence 5678 99999999999999999998888887732 248899985 9999988 8999999999999875
No 115
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.40 E-value=5e-12 Score=133.29 Aligned_cols=111 Identities=15% Similarity=0.005 Sum_probs=71.1
Q ss_pred EEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcC
Q psy463 503 LLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYID 582 (790)
Q Consensus 503 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d 582 (790)
.|+++||......+.+..........++++||.|+++|++|++...... .+.....+++.++++++.++.+
T Consensus 64 pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~------~~~d~~~~~~~~~v~~l~~~~~--- 134 (350)
T TIGR01836 64 PLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL------TLDDYINGYIDKCVDYICRTSK--- 134 (350)
T ss_pred cEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC------CHHHHHHHHHHHHHHHHHHHhC---
Confidence 3778888533211111111122333445589999999999865322110 1111223457778888887433
Q ss_pred CCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc
Q psy463 583 KTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI 623 (790)
Q Consensus 583 ~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~ 623 (790)
..++.++||||||.+++.++..+|. .++++++.++..+..
T Consensus 135 ~~~i~lvGhS~GG~i~~~~~~~~~~-~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 135 LDQISLLGICQGGTFSLCYAALYPD-KIKNLVTMVTPVDFE 174 (350)
T ss_pred CCcccEEEECHHHHHHHHHHHhCch-heeeEEEeccccccC
Confidence 4789999999999999999888875 788888888876653
No 116
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.37 E-value=3.4e-11 Score=118.96 Aligned_cols=136 Identities=15% Similarity=0.023 Sum_probs=91.5
Q ss_pred EEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhH
Q psy463 473 MSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLK 552 (790)
Q Consensus 473 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~ 552 (790)
+.++...|. +.++++.|.+ .++.|+||++||.++... ............++++||.|+.+|+||+|.+.....
T Consensus 3 ~~l~~~~g~-~~~~~~~p~~-----~~~~~~VlllHG~g~~~~-~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~ 75 (266)
T TIGR03101 3 FFLDAPHGF-RFCLYHPPVA-----VGPRGVVIYLPPFAEEMN-KSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA 75 (266)
T ss_pred EEecCCCCc-EEEEEecCCC-----CCCceEEEEECCCccccc-chhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc
Confidence 445554444 6677777763 234689999999765421 111111122344556899999999999876543321
Q ss_pred hhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc
Q psy463 553 YAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY 624 (790)
Q Consensus 553 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~ 624 (790)
.. .+. ..++|+..+++++.+ .+ ..+|+|+||||||.+++.++.++|. .++.+|+.+|+.+...
T Consensus 76 ~~---~~~-~~~~Dv~~ai~~L~~-~~---~~~v~LvG~SmGG~vAl~~A~~~p~-~v~~lVL~~P~~~g~~ 138 (266)
T TIGR03101 76 AA---RWD-VWKEDVAAAYRWLIE-QG---HPPVTLWGLRLGALLALDAANPLAA-KCNRLVLWQPVVSGKQ 138 (266)
T ss_pred cC---CHH-HHHHHHHHHHHHHHh-cC---CCCEEEEEECHHHHHHHHHHHhCcc-ccceEEEeccccchHH
Confidence 11 111 236788888888876 33 4789999999999999999988875 7888999999876543
No 117
>PRK10115 protease 2; Provisional
Probab=99.35 E-value=9.7e-09 Score=116.54 Aligned_cols=119 Identities=8% Similarity=0.161 Sum_probs=71.5
Q ss_pred CcEEEEEeccCcceEEEEEECC-CCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEE
Q psy463 258 SVVAAWVNRVQNRARITRCSIN-EGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFI 336 (790)
Q Consensus 258 g~~~~~~~r~~~~~~i~~~~~~-~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~ 336 (790)
+.+...++.+.....|..+++. .++.+.|..... .+. ...+.++ ++.|++... .+| ...|+++
T Consensus 280 ~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~--~~~--i~~~~~~--~~~l~~~~~----~~g------~~~l~~~ 343 (686)
T PRK10115 280 HRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRE--NIM--LEGFTLF--TDWLVVEER----QRG------LTSLRQI 343 (686)
T ss_pred CEEEEEEcCCCCCceEEEecCCCcccCeEEECCCC--CCE--EEEEEEE--CCEEEEEEE----eCC------EEEEEEE
Confidence 3455666666666778888887 455555654421 111 2345565 567775554 567 7789999
Q ss_pred EcCCCCcccCCCccccc-CCCeEEeEEEeee--cCCCEEEEEEcC-CCCceEEEEEEEcCCCCCCcceeee
Q psy463 337 DLDDQAGIKDKVPVPLT-RGRFTVTEILAWD--EKENNVYFLSTQ-GSPIVQHMYRINIADPTATPECITC 403 (790)
Q Consensus 337 d~~~~~~~~~~~~~~lt-~~~~~~~~~~~~s--~dg~~l~~~~~~-~~~~~~~l~~~~~~~~~~~~~~lt~ 403 (790)
++.+++ .+.|+ .....+ .....+ ++++.++|.... ..| ..+|.+++++ ++.+.|+.
T Consensus 344 ~~~~~~------~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~ss~~~P--~~~y~~d~~~--~~~~~l~~ 403 (686)
T PRK10115 344 NRKTRE------VIGIAFDDPAYV-TWIAYNPEPETSRLRYGYSSMTTP--DTLFELDMDT--GERRVLKQ 403 (686)
T ss_pred cCCCCc------eEEecCCCCceE-eeecccCCCCCceEEEEEecCCCC--CEEEEEECCC--CcEEEEEe
Confidence 987665 66665 222222 223344 566667766555 444 7899999877 55555654
No 118
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=99.32 E-value=1.5e-09 Score=109.40 Aligned_cols=315 Identities=15% Similarity=0.132 Sum_probs=151.4
Q ss_pred eeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccc---cccCCCcceeEeeeecccceeEEEEe
Q psy463 12 ALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLS---RVNWANESVVAAWVNRVQNRARITRC 88 (790)
Q Consensus 12 ~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~w~~~~~~~~~~~r~~~~~~~~~~ 88 (790)
...|++||++|.|.+..++..++|.|.+..++ +.+||+.... ..-++++.+.+.|.... ..+...
T Consensus 40 ~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~---------i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~---~~l~~v 107 (386)
T PF14583_consen 40 QNCFTDDGRKLLFASDFDGNRNLYLLDLATGE---------ITQLTDGPGDNTFGGFLSPDDRALYYVKNG---RSLRRV 107 (386)
T ss_dssp S--B-TTS-EEEEEE-TTSS-EEEEEETTT-E---------EEE---SS-B-TTT-EE-TTSSEEEEEETT---TEEEEE
T ss_pred CCCcCCCCCEEEEEeccCCCcceEEEEcccCE---------EEECccCCCCCccceEEecCCCeEEEEECC---CeEEEE
Confidence 46799999999999999999999999999886 7777775432 22345566665554322 345667
Q ss_pred eCCCCeeeEEEeecCCCCccccCCcccc--ccCCceEEEEeecCCCCC--CC-------CCCcCCcEEEEEEcCCcCCcc
Q psy463 89 SINEGTCDVVFSRDLDRGWFEPFDHLRF--SSDGKKMLLILSHNQESD--GS-------TPVDSWDHLTFIDLDDQAGIK 157 (790)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--spdg~~i~~~~~~~~~~~--~~-------~~~g~~~~l~~~~~~~~~~~~ 157 (790)
+..|++.+.+++.+++ |.+ ...| ..|+.+++.......... .. |--.--..|..+++.+|+
T Consensus 108 dL~T~e~~~vy~~p~~--~~g---~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~--- 179 (386)
T PF14583_consen 108 DLDTLEERVVYEVPDD--WKG---YGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGE--- 179 (386)
T ss_dssp ETTT--EEEEEE--TT--EEE---EEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT-----
T ss_pred ECCcCcEEEEEECCcc--ccc---ccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCc---
Confidence 7888888888877643 221 1233 457888777643221100 00 000001348888998884
Q ss_pred CCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhh
Q psy463 158 DKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILA 237 (790)
Q Consensus 158 ~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~ 237 (790)
....+....|- +-.-+.|....+|.|-- ++++.. ....||+++.+++..+++.. +
T Consensus 180 --~~~v~~~~~wl--gH~~fsP~dp~li~fCH---EGpw~~---Vd~RiW~i~~dg~~~~~v~~--~------------- 234 (386)
T PF14583_consen 180 --RKVVFEDTDWL--GHVQFSPTDPTLIMFCH---EGPWDL---VDQRIWTINTDGSNVKKVHR--R------------- 234 (386)
T ss_dssp --EEEEEEESS-E--EEEEEETTEEEEEEEEE----S-TTT---SS-SEEEEETTS---EESS-----------------
T ss_pred --eeEEEecCccc--cCcccCCCCCCEEEEec---cCCcce---eceEEEEEEcCCCcceeeec--C-------------
Confidence 23333333222 12223333333354422 222221 22589999999987555421 1
Q ss_pred cccCCCCCCCEEEEEEEccCCcEEEEEe--ccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEE
Q psy463 238 WDEKENNVEPVLSRVNWANESVVAAWVN--RVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLIL 315 (790)
Q Consensus 238 ~~~~~~~~~~~~~~~~wspDg~~~~~~~--r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~ 315 (790)
......+.--|+|||+.+.+.. +++....|+.+++++++.+.+...+. ...+.-|+||+.++==.
T Consensus 235 ------~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~p~-------~~H~~ss~Dg~L~vGDG 301 (386)
T PF14583_consen 235 ------MEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEMPW-------CSHFMSSPDGKLFVGDG 301 (386)
T ss_dssp -------TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE-S-------EEEEEE-TTSSEEEEEE
T ss_pred ------CCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeCCc-------eeeeEEcCCCCEEEecC
Confidence 2345678889999999444432 33445569999999998776655431 23566689999664222
Q ss_pred ccc-c---ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCC--eE-------Ee-EEEeeecCCCEEEEEEcCCCC
Q psy463 316 SHN-Q---ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR--FT-------VT-EILAWDEKENNVYFLSTQGSP 381 (790)
Q Consensus 316 ~~~-~---~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~--~~-------~~-~~~~~s~dg~~l~~~~~~~~~ 381 (790)
+.. . +..|. -+....-||++++..+. ...|.... +. +. -.++|+|||++|+|.++..++
T Consensus 302 ~d~p~~v~~~~~~-~~~~~p~i~~~~~~~~~------~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~ 374 (386)
T PF14583_consen 302 GDAPVDVADAGGY-KIENDPWIYLFDVEAGR------FRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGP 374 (386)
T ss_dssp --------------------EEEEEETTTTE------EEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS
T ss_pred CCCCccccccccc-eecCCcEEEEeccccCc------eeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCC
Confidence 200 0 00010 00112367888887665 33333221 11 11 138999999999999999332
Q ss_pred ceEEEEEEEcCC
Q psy463 382 IVQHMYRINIAD 393 (790)
Q Consensus 382 ~~~~l~~~~~~~ 393 (790)
..||.+.+..
T Consensus 375 --~~vY~v~i~~ 384 (386)
T PF14583_consen 375 --PAVYLVEIPD 384 (386)
T ss_dssp ---EEEEEE--C
T ss_pred --ccEEEEeCcc
Confidence 7999998753
No 119
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.30 E-value=2.1e-11 Score=117.30 Aligned_cols=177 Identities=16% Similarity=0.160 Sum_probs=94.5
Q ss_pred hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCch
Q psy463 564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNL 643 (790)
Q Consensus 564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 643 (790)
++-+..+++||.+ .+.++.++|+|+|.|.||-+|+.++.++| .++++|+.+|..-.......+...- . +
T Consensus 3 LEyfe~Ai~~L~~-~p~v~~~~Igi~G~SkGaelALllAs~~~--~i~avVa~~ps~~~~~~~~~~~~~~--~------~ 71 (213)
T PF08840_consen 3 LEYFEEAIDWLKS-HPEVDPDKIGIIGISKGAELALLLASRFP--QISAVVAISPSSVVFQGIGFYRDSS--K------P 71 (213)
T ss_dssp CHHHHHHHHHHHC-STTB--SSEEEEEETHHHHHHHHHHHHSS--SEEEEEEES--SB--SSEEEETTE----------E
T ss_pred hHHHHHHHHHHHh-CCCCCCCCEEEEEECHHHHHHHHHHhcCC--CccEEEEeCCceeEecchhcccCCC--c------c
Confidence 3445678999998 89999999999999999999999999987 7999999888543221100010000 0 0
Q ss_pred hhhhhccccchhhhcc-CCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhc
Q psy463 644 EGYKIAALNNKVDRIR-DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDR 722 (790)
Q Consensus 644 ~~~~~~~~~~~~~~~~-~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 722 (790)
-.+..... .... ..+..+.. ...+......... ...-.+++
T Consensus 72 lp~~~~~~----~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~-~a~IpvE~ 113 (213)
T PF08840_consen 72 LPYLPFDI----SKFSWNEPGLLRS---------------------------------RYAFELADDKAVE-EARIPVEK 113 (213)
T ss_dssp E----B-G----GG-EE-TTS-EE----------------------------------TT-B--TTTGGGC-CCB--GGG
T ss_pred CCcCCcCh----hhceecCCcceeh---------------------------------hhhhhcccccccc-cccccHHH
Confidence 00000000 0000 00000000 0000000000000 00023778
Q ss_pred cCCccEEEEecCCCcccchh-hhHHHHHHHHhcCCc--eEEEEcCCCCCcCCC---------c-----------------
Q psy463 723 IRDKQYLLVHGTMDDNVHFQ-QSMMLAKSLQHADIM--FQSQTYPDEEHGLIG---------V----------------- 773 (790)
Q Consensus 723 i~~~P~Lii~G~~D~~v~~~-~~~~l~~~l~~~g~~--~~~~~~p~~~H~~~~---------~----------------- 773 (790)
+ ++|+|+++|+.|...|.. .+..+.+.|++++.+ ++.+.||++||.+.. .
T Consensus 114 i-~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~ 192 (213)
T PF08840_consen 114 I-KGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAH 192 (213)
T ss_dssp ---SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHH
T ss_pred c-CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHH
Confidence 8 999999999999999854 556778889998875 788999999998742 0
Q ss_pred ---chHHHHHHHHHHHHhhC
Q psy463 774 ---RPHFYHTLERFLDSCFA 790 (790)
Q Consensus 774 ---~~~~~~~i~~fl~~~l~ 790 (790)
.++.++.+++||+++|.
T Consensus 193 a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 193 AKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp HHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 13677999999999984
No 120
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.29 E-value=8.4e-11 Score=145.41 Aligned_cols=260 Identities=12% Similarity=0.037 Sum_probs=134.4
Q ss_pred CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463 500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP 579 (790)
Q Consensus 500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 579 (790)
..|+||++||.+++. ..|.. +. ..+. .+|.|+.+|+||+|.+................++++.+.+..++++
T Consensus 1370 ~~~~vVllHG~~~s~---~~w~~-~~-~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~-- 1441 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTG---EDWIP-IM-KAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEH-- 1441 (1655)
T ss_pred CCCeEEEECCCCCCH---HHHHH-HH-HHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHH--
Confidence 347899999998873 33432 22 2343 4699999999998765422100000001123456666666655553
Q ss_pred CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhcc
Q psy463 580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIR 659 (790)
Q Consensus 580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 659 (790)
++.+++.|+||||||.+++.++.++|. +++.+++.++...+..... ...+.... ....................
T Consensus 1442 -l~~~~v~LvGhSmGG~iAl~~A~~~P~-~V~~lVlis~~p~~~~~~~-~~~~~~~~---~~~~~~l~~~g~~~~~~~~~ 1515 (1655)
T PLN02980 1442 -ITPGKVTLVGYSMGARIALYMALRFSD-KIEGAVIISGSPGLKDEVA-RKIRSAKD---DSRARMLIDHGLEIFLENWY 1515 (1655)
T ss_pred -hCCCCEEEEEECHHHHHHHHHHHhChH-hhCEEEEECCCCccCchHH-HHHHhhhh---hHHHHHHHhhhHHHHHHHhc
Confidence 335789999999999999999999986 7887777765432211000 00000000 00000000000000000000
Q ss_pred CCcEEEEeecCCCccChhhHHHHH-HHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcc
Q psy463 660 DKQYLLVHGTMDDNVHFQQSMMLA-KSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDN 738 (790)
Q Consensus 660 ~~p~l~~~g~~d~~v~~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~ 738 (790)
...+. ........ ..... ..+...... ...... ..............+.++ ++|+|+|+|++|..
T Consensus 1516 ~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~l------~~~~~~~~~dl~~~L~~I-~~PtLlI~Ge~D~~ 1581 (1655)
T PLN02980 1516 SGELW-----KSLRNHPH-FNKIVASRLLHKDVP-SLAKLL------SDLSIGRQPSLWEDLKQC-DTPLLLVVGEKDVK 1581 (1655)
T ss_pred cHHHh-----hhhccCHH-HHHHHHHHHhcCCHH-HHHHHH------HHhhhcccchHHHHHhhC-CCCEEEEEECCCCc
Confidence 00000 00000000 00000 000000000 000000 000000011122557888 99999999999997
Q ss_pred cchhhhHHHHHHHHhcC--------CceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463 739 VHFQQSMMLAKSLQHAD--------IMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC 788 (790)
Q Consensus 739 v~~~~~~~l~~~l~~~g--------~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~ 788 (790)
++ ..+.++.+.+.+.. ..++++++|++||..+. +++.+.+.|.+||.+.
T Consensus 1582 ~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~ 1639 (1655)
T PLN02980 1582 FK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRL 1639 (1655)
T ss_pred cH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhc
Confidence 75 66677777766531 12589999999999988 8999999999999864
No 121
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.28 E-value=9.8e-11 Score=123.10 Aligned_cols=71 Identities=14% Similarity=0.079 Sum_probs=62.6
Q ss_pred hhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCC-CCCcCCC-cchHHHHHHHHHHHH
Q psy463 716 LNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPD-EEHGLIG-VRPHFYHTLERFLDS 787 (790)
Q Consensus 716 ~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~-~~H~~~~-~~~~~~~~i~~fl~~ 787 (790)
+...+.++ ++|+|+|+|+.|..+|+..++++.+.++..+..++++++++ .||..+. .++++.+.|.+||++
T Consensus 315 l~~~L~~I-~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 315 LEEALSNI-EANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHHHHhcC-CCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 34667789 99999999999999999999999999987666789999985 8999887 889999999999975
No 122
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.25 E-value=2.1e-10 Score=109.31 Aligned_cols=134 Identities=23% Similarity=0.245 Sum_probs=93.4
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCC-CC--CChhhhHhhh
Q psy463 479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRN-SA--LKGNTLKYAG 555 (790)
Q Consensus 479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG-~~--~~g~~~~~~~ 555 (790)
+|...++++|.|+... .+.|+||++||+.++.......+ . ...++++.||.|+.||... +- .....+....
T Consensus 43 ~g~~r~y~l~vP~g~~----~~apLvv~LHG~~~sgag~~~~s-g-~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~ 116 (312)
T COG3509 43 NGLKRSYRLYVPPGLP----SGAPLVVVLHGSGGSGAGQLHGT-G-WDALADREGFLVAYPDGYDRAWNANGCGNWFGPA 116 (312)
T ss_pred CCCccceEEEcCCCCC----CCCCEEEEEecCCCChHHhhccc-c-hhhhhcccCcEEECcCccccccCCCcccccCCcc
Confidence 7888999999999854 33499999999887633222222 2 2356677899999996432 11 0011110111
Q ss_pred hccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463 556 YRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT 620 (790)
Q Consensus 556 ~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~ 620 (790)
...-+..++..+.+.+..+..+++ +|+.||+|.|.|.||.|+..++..+|+ .|+++..+++..
T Consensus 117 ~~~~g~ddVgflr~lva~l~~~~g-idp~RVyvtGlS~GG~Ma~~lac~~p~-~faa~A~VAg~~ 179 (312)
T COG3509 117 DRRRGVDDVGFLRALVAKLVNEYG-IDPARVYVTGLSNGGRMANRLACEYPD-IFAAIAPVAGLL 179 (312)
T ss_pred cccCCccHHHHHHHHHHHHHHhcC-cCcceEEEEeeCcHHHHHHHHHhcCcc-cccceeeeeccc
Confidence 123344567777888888887455 999999999999999999999999885 898888777653
No 123
>KOG2984|consensus
Probab=99.22 E-value=3.2e-11 Score=106.74 Aligned_cols=245 Identities=14% Similarity=0.099 Sum_probs=134.9
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463 479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR 558 (790)
Q Consensus 479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 558 (790)
+|.++.+.-+ +. +--.|+.+-|..++. ...|..... .+.....+.|++.|.+|.|.+-.+-+..
T Consensus 29 ng~ql~y~~~--------G~-G~~~iLlipGalGs~--~tDf~pql~-~l~k~l~~TivawDPpGYG~SrPP~Rkf---- 92 (277)
T KOG2984|consen 29 NGTQLGYCKY--------GH-GPNYILLIPGALGSY--KTDFPPQLL-SLFKPLQVTIVAWDPPGYGTSRPPERKF---- 92 (277)
T ss_pred cCceeeeeec--------CC-CCceeEecccccccc--cccCCHHHH-hcCCCCceEEEEECCCCCCCCCCCcccc----
Confidence 6777776654 22 223466777776653 222332211 2222234889999999966432221110
Q ss_pred CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCC
Q psy463 559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPT 638 (790)
Q Consensus 559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~ 638 (790)
-...-..|..++++.|.+ ++..++.|+|||-||..++.+|+++++..-+-+|..++. .....+...-+ |.
T Consensus 93 ~~~ff~~Da~~avdLM~a----Lk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~a-yvn~~~~ma~k---gi-- 162 (277)
T KOG2984|consen 93 EVQFFMKDAEYAVDLMEA----LKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAA-YVNHLGAMAFK---GI-- 162 (277)
T ss_pred hHHHHHHhHHHHHHHHHH----hCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccc-eecchhHHHHh---ch--
Confidence 011235677777877776 567899999999999999999999886433334433331 11100000000 00
Q ss_pred ccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhc-CcchhcccccCCCCcCCcchhhhhhhhh
Q psy463 639 FEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA-DIMFQSQRYMGLPTFEDNLEGYKIAALN 717 (790)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (790)
..+..+..... .|+.-..|-.- -..+-..+++..... +.. ..+. ..
T Consensus 163 ----------Rdv~kWs~r~R-~P~e~~Yg~e~---f~~~wa~wvD~v~qf~~~~--------------dG~f-Cr---- 209 (277)
T KOG2984|consen 163 ----------RDVNKWSARGR-QPYEDHYGPET---FRTQWAAWVDVVDQFHSFC--------------DGRF-CR---- 209 (277)
T ss_pred ----------HHHhhhhhhhc-chHHHhcCHHH---HHHHHHHHHHHHHHHhhcC--------------CCch-Hh----
Confidence 00000000000 11111111000 001111122211110 000 0000 11
Q ss_pred hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463 718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS 787 (790)
Q Consensus 718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~ 787 (790)
..+.++ +||+||+||+.|+.|+-.++--+-+.++.+ ++.++|..+|.++. -++++...+++||++
T Consensus 210 ~~lp~v-kcPtli~hG~kDp~~~~~hv~fi~~~~~~a----~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 210 LVLPQV-KCPTLIMHGGKDPFCGDPHVCFIPVLKSLA----KVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred hhcccc-cCCeeEeeCCcCCCCCCCCccchhhhcccc----eEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 446788 999999999999999988887777666655 88999999999997 899999999999986
No 124
>KOG3043|consensus
Probab=99.21 E-value=4.1e-10 Score=102.45 Aligned_cols=166 Identities=16% Similarity=0.178 Sum_probs=117.7
Q ss_pred HHHHHhcCCeEEEEEcCC-C---CCCChh-hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHH
Q psy463 525 NLYLADNKDIVVAYIDGR-N---SALKGN-TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATG 599 (790)
Q Consensus 525 ~~~~~~~~G~~v~~~d~r-G---~~~~g~-~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~ 599 (790)
....++..||.|+.||+- | +..... .......+.-......++...++||.. . -+..+|+++|.+|||-++.
T Consensus 59 ~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~-~--g~~kkIGv~GfCwGak~vv 135 (242)
T KOG3043|consen 59 GADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKN-H--GDSKKIGVVGFCWGAKVVV 135 (242)
T ss_pred HHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHH-c--CCcceeeEEEEeecceEEE
Confidence 344555679999999975 4 111011 111111111122347888999999986 3 3468999999999998887
Q ss_pred HHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhH
Q psy463 600 LALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQS 679 (790)
Q Consensus 600 ~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~ 679 (790)
.+...++ .|.++++..|..-
T Consensus 136 ~~~~~~~--~f~a~v~~hps~~---------------------------------------------------------- 155 (242)
T KOG3043|consen 136 TLSAKDP--EFDAGVSFHPSFV---------------------------------------------------------- 155 (242)
T ss_pred Eeeccch--hheeeeEecCCcC----------------------------------------------------------
Confidence 7666554 6666666655210
Q ss_pred HHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCC-ce
Q psy463 680 MMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI-MF 758 (790)
Q Consensus 680 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~-~~ 758 (790)
+ . ..+.++ ++|+|++.|+.|..+|+....++.+.+++... ..
T Consensus 156 ----------d-~-------------------------~D~~~v-k~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~ 198 (242)
T KOG3043|consen 156 ----------D-S-------------------------ADIANV-KAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGS 198 (242)
T ss_pred ----------C-h-------------------------hHHhcC-CCCEEEEeecccccCCHHHHHHHHHHHhcCcccce
Confidence 0 0 446677 89999999999999999999999999887643 34
Q ss_pred EEEEcCCCCCcCCC------------cchHHHHHHHHHHHHhhC
Q psy463 759 QSQTYPDEEHGLIG------------VRPHFYHTLERFLDSCFA 790 (790)
Q Consensus 759 ~~~~~p~~~H~~~~------------~~~~~~~~i~~fl~~~l~ 790 (790)
++.+|+|.+|++.. ..++.++.++.||+++++
T Consensus 199 ~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~~ 242 (242)
T KOG3043|consen 199 QVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYLA 242 (242)
T ss_pred eEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhhC
Confidence 78999999999872 235788999999999874
No 125
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.21 E-value=3.2e-08 Score=102.49 Aligned_cols=241 Identities=14% Similarity=0.142 Sum_probs=138.8
Q ss_pred ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463 113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ 192 (790)
Q Consensus 113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (790)
...|+|||+.++...... +.|+++++.+++ ....+..+.. + ....++++++ .+|++...
T Consensus 35 ~l~~~~dg~~l~~~~~~~------------~~v~~~d~~~~~-----~~~~~~~~~~-~-~~~~~~~~g~--~l~~~~~~ 93 (300)
T TIGR03866 35 GITLSKDGKLLYVCASDS------------DTIQVIDLATGE-----VIGTLPSGPD-P-ELFALHPNGK--ILYIANED 93 (300)
T ss_pred ceEECCCCCEEEEEECCC------------CeEEEEECCCCc-----EEEeccCCCC-c-cEEEECCCCC--EEEEEcCC
Confidence 468999999876654322 279999988764 2233333221 2 2346777665 45554321
Q ss_pred CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463 193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR 272 (790)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~ 272 (790)
...|+++|+.+++.. ..+. .......+.|+|||++++...... ..
T Consensus 94 ----------~~~l~~~d~~~~~~~-----~~~~------------------~~~~~~~~~~~~dg~~l~~~~~~~--~~ 138 (300)
T TIGR03866 94 ----------DNLVTVIDIETRKVL-----AEIP------------------VGVEPEGMAVSPDGKIVVNTSETT--NM 138 (300)
T ss_pred ----------CCeEEEEECCCCeEE-----eEee------------------CCCCcceEEECCCCCEEEEEecCC--Ce
Confidence 147888888765321 1111 011234689999999665554432 23
Q ss_pred EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463 273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL 352 (790)
Q Consensus 273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l 352 (790)
++.++..+++......... ......|+|||+.|++ .+ ..+| .|+++|+++++. .+.+
T Consensus 139 ~~~~d~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~-~~---~~~~--------~v~i~d~~~~~~-----~~~~ 195 (300)
T TIGR03866 139 AHFIDTKTYEIVDNVLVDQ------RPRFAEFTADGKELWV-SS---EIGG--------TVSVIDVATRKV-----IKKI 195 (300)
T ss_pred EEEEeCCCCeEEEEEEcCC------CccEEEECCCCCEEEE-Ec---CCCC--------EEEEEEcCccee-----eeee
Confidence 5667887776543222111 1236889999998874 33 2344 688999987751 2333
Q ss_pred cCC-------CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCc
Q psy463 353 TRG-------RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVS 425 (790)
Q Consensus 353 t~~-------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~ 425 (790)
+.. ...... +.|+||++.+++..... ..+.++++.+ ++...... .......+.|+|+|+
T Consensus 196 ~~~~~~~~~~~~~~~~-i~~s~dg~~~~~~~~~~----~~i~v~d~~~--~~~~~~~~-------~~~~~~~~~~~~~g~ 261 (300)
T TIGR03866 196 TFEIPGVHPEAVQPVG-IKLTKDGKTAFVALGPA----NRVAVVDAKT--YEVLDYLL-------VGQRVWQLAFTPDEK 261 (300)
T ss_pred eecccccccccCCccc-eEECCCCCEEEEEcCCC----CeEEEEECCC--CcEEEEEE-------eCCCcceEEECCCCC
Confidence 211 111112 67899999876654332 3577778765 44332211 122456789999999
Q ss_pred EEEEEeecCCCCeEEEEecCCCe
Q psy463 426 YYVLSCIGPGIPEIMLFDKTGQR 448 (790)
Q Consensus 426 ~~~~~~~~~~~~~i~~~~~~~~~ 448 (790)
+++... ..-..|.++|+++++
T Consensus 262 ~l~~~~--~~~~~i~v~d~~~~~ 282 (300)
T TIGR03866 262 YLLTTN--GVSNDVSVIDVAALK 282 (300)
T ss_pred EEEEEc--CCCCeEEEEECCCCc
Confidence 886542 223468999988754
No 126
>PRK05855 short chain dehydrogenase; Validated
Probab=99.19 E-value=2.2e-10 Score=131.09 Aligned_cols=62 Identities=16% Similarity=0.052 Sum_probs=50.5
Q ss_pred hccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHh
Q psy463 721 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSC 788 (790)
Q Consensus 721 ~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~ 788 (790)
..+ ++|+|+++|++|..+|+.....+.+.+.. .++++++ +||..+. +++.+.+.|.+|+.+.
T Consensus 230 ~~~-~~P~lii~G~~D~~v~~~~~~~~~~~~~~----~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~ 292 (582)
T PRK05855 230 RYT-DVPVQLIVPTGDPYVRPALYDDLSRWVPR----LWRREIK-AGHWLPMSHPQVLAAAVAEFVDAV 292 (582)
T ss_pred CCc-cCceEEEEeCCCcccCHHHhccccccCCc----ceEEEcc-CCCcchhhChhHHHHHHHHHHHhc
Confidence 347 89999999999999999888877655442 3667776 5999887 8889999999999763
No 127
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.18 E-value=4.5e-10 Score=121.32 Aligned_cols=128 Identities=13% Similarity=0.065 Sum_probs=77.7
Q ss_pred EEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc-cchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCC
Q psy463 482 EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS-VDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLG 560 (790)
Q Consensus 482 ~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~ 560 (790)
.+..+.|.|.. .....+.|+++|+......+.+--. ..+..++++ +||.|+++|.+|.+.....+ .+.
T Consensus 173 ~~eLi~Y~P~t----~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~-qGf~V~~iDwrgpg~s~~~~------~~d 241 (532)
T TIGR01838 173 LFQLIQYEPTT----ETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVE-QGHTVFVISWRNPDASQADK------TFD 241 (532)
T ss_pred cEEEEEeCCCC----CcCCCCcEEEECcccccceeeecccchHHHHHHHH-CCcEEEEEECCCCCcccccC------Chh
Confidence 34555666653 1223455778898654322211111 124444554 89999999999976543221 111
Q ss_pred ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHH----HHHhcCCCCceEEEEEeCCCCCcc
Q psy463 561 TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATG----LALALDPSNVFKCGISVAPVTDWI 623 (790)
Q Consensus 561 ~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~----~~a~~~p~~~~~~~v~~~~~~~~~ 623 (790)
.+..+++.++++.+.+. .+..++.++||||||.+++ .++..+++++++.++..+...++.
T Consensus 242 dY~~~~i~~al~~v~~~---~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 242 DYIRDGVIAALEVVEAI---TGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFS 305 (532)
T ss_pred hhHHHHHHHHHHHHHHh---cCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCC
Confidence 23345677888888763 3468899999999999852 234444334788888777766654
No 128
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.13 E-value=2.5e-09 Score=113.16 Aligned_cols=206 Identities=17% Similarity=0.150 Sum_probs=123.1
Q ss_pred eEEEEEEcC-CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCC----eEEEEEcCCCC
Q psy463 470 VEYMSVPIQ-PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKD----IVVAYIDGRNS 544 (790)
Q Consensus 470 ~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G----~~v~~~d~rG~ 544 (790)
...+.+.+. -|.+...++|.|.++. .+++|+|+++||...... .........+.+ .| .+|+.+|....
T Consensus 180 ~~~~~~~S~~Lg~~r~v~VY~P~~y~---~~~~PvlyllDG~~w~~~---~~~~~~ld~li~-~g~i~P~ivV~id~~~~ 252 (411)
T PRK10439 180 AKEIIWKSERLGNSRRVWIYTTGDAA---PEERPLAILLDGQFWAES---MPVWPALDSLTH-RGQLPPAVYLLIDAIDT 252 (411)
T ss_pred eEEEEEEccccCCceEEEEEECCCCC---CCCCCEEEEEECHHhhhc---CCHHHHHHHHHH-cCCCCceEEEEECCCCc
Confidence 344455543 3677888999998864 457999999999765421 111122223333 34 45788876322
Q ss_pred CCChhhhHhhhhccCCccchh-HH-HHHHHHHHHhCCC-cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463 545 ALKGNTLKYAGYRRLGTVEIY-DQ-INVTRYLQENLPY-IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD 621 (790)
Q Consensus 545 ~~~g~~~~~~~~~~~~~~~~~-D~-~~~~~~l~~~~~~-~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~ 621 (790)
......... . ..+. .+ .+.+-++.++++. .|+++.+|+|+||||+.|++++.++|+ .|.++++.+|...
T Consensus 253 ~~R~~el~~--~-----~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd-~Fg~v~s~Sgs~w 324 (411)
T PRK10439 253 THRSQELPC--N-----ADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPE-RFGCVLSQSGSFW 324 (411)
T ss_pred ccccccCCc--h-----HHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcc-cccEEEEecccee
Confidence 111111100 0 0111 11 1233444444442 467899999999999999999999986 9999999998532
Q ss_pred cccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCC
Q psy463 622 WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGL 701 (790)
Q Consensus 622 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~ 701 (790)
|... ..... ..+.+.+....
T Consensus 325 w~~~--------------~~~~~-----------------------------------~~l~~~l~~~~----------- 344 (411)
T PRK10439 325 WPHR--------------GGQQE-----------------------------------GVLLEQLKAGE----------- 344 (411)
T ss_pred cCCc--------------cCCch-----------------------------------hHHHHHHHhcc-----------
Confidence 2100 00000 00111111100
Q ss_pred CCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCC
Q psy463 702 PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLI 771 (790)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~ 771 (790)
...- ...++|.+|+.|..+ ....+.+.+.|+++|.++++.+++| ||...
T Consensus 345 ------------------~~~~-~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~~ 393 (411)
T PRK10439 345 ------------------VSAR-GLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GHDAL 393 (411)
T ss_pred ------------------cCCC-CceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-CcCHH
Confidence 0011 456888899998644 5677999999999999999999998 79554
No 129
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.13 E-value=1.6e-09 Score=114.72 Aligned_cols=139 Identities=17% Similarity=0.207 Sum_probs=103.3
Q ss_pred EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc-cchHH--HHHhcCCeEEEEEcCCCCCCC
Q psy463 471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS-VDWNL--YLADNKDIVVAYIDGRNSALK 547 (790)
Q Consensus 471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-~~~~~--~~~~~~G~~v~~~d~rG~~~~ 547 (790)
..+.++.+||++|...+|+|.+ .++.|+++..+-.|........+. ..... ..++++||+|+..|.||.+++
T Consensus 20 ~~v~V~MRDGvrL~~dIy~Pa~-----~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~S 94 (563)
T COG2936 20 RDVMVPMRDGVRLAADIYRPAG-----AGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGS 94 (563)
T ss_pred eeeeEEecCCeEEEEEEEccCC-----CCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccC
Confidence 4567888999999999999984 578899998884443321000110 11111 245559999999999998877
Q ss_pred hhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCc
Q psy463 548 GNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDW 622 (790)
Q Consensus 548 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~ 622 (790)
...+... ...+++|-.+.|+|+.+ +++-| .+|+++|.||+|+.++++|+..|+ ..|+++...+..+.
T Consensus 95 eG~~~~~-----~~~E~~Dg~D~I~Wia~-QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pP-aLkai~p~~~~~D~ 161 (563)
T COG2936 95 EGVFDPE-----SSREAEDGYDTIEWLAK-QPWSN-GNVGMLGLSYLGFTQLAAAALQPP-ALKAIAPTEGLVDR 161 (563)
T ss_pred Cccccee-----ccccccchhHHHHHHHh-CCccC-CeeeeecccHHHHHHHHHHhcCCc-hheeeccccccccc
Confidence 6554321 11478899999999998 88766 589999999999999999998776 88998888887764
No 130
>KOG2564|consensus
Probab=99.12 E-value=1.3e-09 Score=102.21 Aligned_cols=117 Identities=21% Similarity=0.068 Sum_probs=74.9
Q ss_pred eEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChh
Q psy463 470 VEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGN 549 (790)
Q Consensus 470 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~ 549 (790)
.+.+.++..++ ++..++..|+ ...-|++++.||++.+. -.|. .+...+.......++++|.||+|..--
T Consensus 50 kedv~i~~~~~-t~n~Y~t~~~------~t~gpil~l~HG~G~S~---LSfA-~~a~el~s~~~~r~~a~DlRgHGeTk~ 118 (343)
T KOG2564|consen 50 KEDVSIDGSDL-TFNVYLTLPS------ATEGPILLLLHGGGSSA---LSFA-IFASELKSKIRCRCLALDLRGHGETKV 118 (343)
T ss_pred ccccccCCCcc-eEEEEEecCC------CCCccEEEEeecCcccc---hhHH-HHHHHHHhhcceeEEEeeccccCcccc
Confidence 34444444333 6777777774 34569999999998763 2333 245566666677889999999987543
Q ss_pred hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhc
Q psy463 550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALAL 604 (790)
Q Consensus 550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~ 604 (790)
+...... ......|+.+.++++ ++. ...+|.++||||||.+|.+.+..
T Consensus 119 ~~e~dlS---~eT~~KD~~~~i~~~---fge-~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 119 ENEDDLS---LETMSKDFGAVIKEL---FGE-LPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred CChhhcC---HHHHHHHHHHHHHHH---hcc-CCCceEEEeccccchhhhhhhhh
Confidence 3222110 113456666666665 332 34689999999999999877653
No 131
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.11 E-value=3.9e-11 Score=119.02 Aligned_cols=224 Identities=17% Similarity=0.081 Sum_probs=118.8
Q ss_pred eEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEE
Q psy463 534 IVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCG 613 (790)
Q Consensus 534 ~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~ 613 (790)
|.|+++|.||.+.+... ...........|+.+.++.+++.++ .+++.++||||||.+++.++..+|+ +++.+
T Consensus 1 f~vi~~d~rG~g~S~~~----~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~p~-~v~~l 72 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH----WDPDFPDYTTDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQYPE-RVKKL 72 (230)
T ss_dssp EEEEEEECTTSTTSSSC----CGSGSCTHCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHSGG-GEEEE
T ss_pred CEEEEEeCCCCCCCCCC----ccCCcccccHHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHCch-hhcCc
Confidence 68999999998875521 0112233568888999999888555 4569999999999999999999997 99999
Q ss_pred EEeCCCCCccc--ccccchh-hhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcC
Q psy463 614 ISVAPVTDWIY--YDTIYSE-RYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD 690 (790)
Q Consensus 614 v~~~~~~~~~~--~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~ 690 (790)
++.+++..... -...+.. ...... ......+.............. . ........+...........+....
T Consensus 73 vl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (230)
T PF00561_consen 73 VLISPPPDLPDGLWNRIWPRGNLQGQL--LDNFFNFLSDPIKPLLGRWPK-Q---FFAYDREFVEDFLKQFQSQQYARFA 146 (230)
T ss_dssp EEESESSHHHHHHHHHCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH-H---HHHHHHHHHHTHHHHHHHHHHHHTC
T ss_pred EEEeeeccchhhhhHHHHhhhhhhhhH--HHhhhccccccchhhhhhhhh-h---eeeccCccccchhhccchhhhhHHH
Confidence 98888621000 0000000 000000 000000000000000000000 0 0000000000000000000000000
Q ss_pred cchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcC
Q psy463 691 IMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGL 770 (790)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~ 770 (790)
...... ..+......+........+.++ ++|+|+++|+.|..+|+.....+.+.+.. .++++++++||..
T Consensus 147 ~~~~~~-----~~~~~~~~~~~~~~~~~~l~~i-~~p~l~i~~~~D~~~p~~~~~~~~~~~~~----~~~~~~~~~GH~~ 216 (230)
T PF00561_consen 147 ETDAFD-----NMFWNALGYFSVWDPSPALSNI-KVPTLIIWGEDDPLVPPESSEQLAKLIPN----SQLVLIEGSGHFA 216 (230)
T ss_dssp HHHHHH-----HHHHHHHHHHHHHHHHHHHTTT-TSEEEEEEETTCSSSHHHHHHHHHHHSTT----EEEEEETTCCSTH
T ss_pred HHHHHh-----hhcccccccccccccccccccc-CCCeEEEEeCCCCCCCHHHHHHHHHhcCC----CEEEECCCCChHH
Confidence 000000 0000112233444455667788 99999999999999999999998777765 4899999999988
Q ss_pred CC-cchHHHHHH
Q psy463 771 IG-VRPHFYHTL 781 (790)
Q Consensus 771 ~~-~~~~~~~~i 781 (790)
.. ..+++.+.+
T Consensus 217 ~~~~~~~~~~~i 228 (230)
T PF00561_consen 217 FLEGPDEFNEII 228 (230)
T ss_dssp HHHSHHHHHHHH
T ss_pred HhcCHHhhhhhh
Confidence 76 555555544
No 132
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.09 E-value=1e-09 Score=110.88 Aligned_cols=64 Identities=22% Similarity=0.142 Sum_probs=53.8
Q ss_pred CccEEEEecCCCcccchhhhHHHHHHHHhcC-CceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhhC
Q psy463 725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD-IMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCFA 790 (790)
Q Consensus 725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g-~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l~ 790 (790)
+.|++|.||..|.+||+..+..+++.++.+| .++++..+++.+|.... .......+.||.+.|+
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~--~~~~~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAA--FASAPDALAWLDDRFA 283 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhh--hcCcHHHHHHHHHHHC
Confidence 7999999999999999999999999999999 79999999999997642 1223566677777653
No 133
>KOG4627|consensus
Probab=99.06 E-value=1.4e-09 Score=96.77 Aligned_cols=227 Identities=15% Similarity=0.045 Sum_probs=140.8
Q ss_pred hccCCCCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcC
Q psy463 462 LTNITLPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDG 541 (790)
Q Consensus 462 ~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~ 541 (790)
+++...++.+.+.+-- +| .....++.|.+ ..|++|++|||-+..... .-+... ...+.++||+|+.++|
T Consensus 37 Lkn~~i~r~e~l~Yg~-~g-~q~VDIwg~~~-------~~klfIfIHGGYW~~g~r-k~clsi-v~~a~~~gY~vasvgY 105 (270)
T KOG4627|consen 37 LKNKQIIRVEHLRYGE-GG-RQLVDIWGSTN-------QAKLFIFIHGGYWQEGDR-KMCLSI-VGPAVRRGYRVASVGY 105 (270)
T ss_pred hhhccccchhccccCC-CC-ceEEEEecCCC-------CccEEEEEecchhhcCch-hcccch-hhhhhhcCeEEEEecc
Confidence 3444444455443322 23 22334455543 347999999998764311 111112 2234458999999998
Q ss_pred CCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463 542 RNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD 621 (790)
Q Consensus 542 rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~ 621 (790)
--++. +.. ....+.++...++|+.+..+ +.+++.+.|||.|+.+++.+..|..+.++.+++..+|+.+
T Consensus 106 ~l~~q-~ht---------L~qt~~~~~~gv~filk~~~--n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~ 173 (270)
T KOG4627|consen 106 NLCPQ-VHT---------LEQTMTQFTHGVNFILKYTE--NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD 173 (270)
T ss_pred CcCcc-ccc---------HHHHHHHHHHHHHHHHHhcc--cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh
Confidence 65442 211 12557888899999988444 4567999999999999999998877778889999998876
Q ss_pred cccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCC
Q psy463 622 WIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGL 701 (790)
Q Consensus 622 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~ 701 (790)
+.-....-....+|.. -.+++ ..+..
T Consensus 174 l~EL~~te~g~dlgLt--------------------------------------~~~ae-------~~Scd--------- 199 (270)
T KOG4627|consen 174 LRELSNTESGNDLGLT--------------------------------------ERNAE-------SVSCD--------- 199 (270)
T ss_pred HHHHhCCccccccCcc--------------------------------------cchhh-------hcCcc---------
Confidence 5421100000000110 00000 00111
Q ss_pred CCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-----cchH
Q psy463 702 PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-----VRPH 776 (790)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-----~~~~ 776 (790)
+..++.+ +.|+|++.+++|..-..++.+.+.+.+.++ .+..|++.+|.-.. +...
T Consensus 200 ---------------l~~~~~v-~~~ilVv~~~~espklieQnrdf~~q~~~a----~~~~f~n~~hy~I~~~~~~~~s~ 259 (270)
T KOG4627|consen 200 ---------------LWEYTDV-TVWILVVAAEHESPKLIEQNRDFADQLRKA----SFTLFKNYDHYDIIEETAIDDSD 259 (270)
T ss_pred ---------------HHHhcCc-eeeeeEeeecccCcHHHHhhhhHHHHhhhc----ceeecCCcchhhHHHHhccccch
Confidence 1445667 899999999999888899999999998876 78899999996532 3344
Q ss_pred HHHHHHHHH
Q psy463 777 FYHTLERFL 785 (790)
Q Consensus 777 ~~~~i~~fl 785 (790)
.+..+..|+
T Consensus 260 ~~~~~~~~~ 268 (270)
T KOG4627|consen 260 VSRFLRNIE 268 (270)
T ss_pred HHHHHHHHh
Confidence 455555443
No 134
>KOG2382|consensus
Probab=99.06 E-value=3e-09 Score=104.04 Aligned_cols=61 Identities=13% Similarity=0.152 Sum_probs=54.8
Q ss_pred CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHHhh
Q psy463 725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDSCF 789 (790)
Q Consensus 725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~~l 789 (790)
..|+|+++|.++..++.++-.++.+.++. +++.+++++||+++. +++.+.+.|.+|+..+.
T Consensus 253 ~~pvlfi~g~~S~fv~~~~~~~~~~~fp~----~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 253 TGPVLFIKGLQSKFVPDEHYPRMEKIFPN----VEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred ccceeEEecCCCCCcChhHHHHHHHhccc----hheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 79999999999999998888888777765 589999999999998 99999999999998653
No 135
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.03 E-value=5.4e-09 Score=125.21 Aligned_cols=65 Identities=12% Similarity=0.081 Sum_probs=54.7
Q ss_pred hhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEE-EEcCCCCCcCCC----cchHHHHHHHHHHHHh
Q psy463 719 KVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQS-QTYPDEEHGLIG----VRPHFYHTLERFLDSC 788 (790)
Q Consensus 719 ~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~-~~~p~~~H~~~~----~~~~~~~~i~~fl~~~ 788 (790)
.+.+| ++|+|+++|++|.++|++.++.+.+.+... ++ .+++++||.... .+++++..+.+||.++
T Consensus 292 ~L~~i-~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a----~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 292 TLADI-TCPVLAFVGEVDDIGQPASVRGIRRAAPNA----EVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred chhhC-CCCEEEEEeCCCCCCCHHHHHHHHHhCCCC----eEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 46788 999999999999999999999998877544 55 577899998653 6788999999999875
No 136
>KOG0271|consensus
Probab=99.03 E-value=4.5e-08 Score=95.27 Aligned_cols=104 Identities=15% Similarity=0.205 Sum_probs=71.1
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
.....+..+.+||||++++..+-+.. +.+.+..+|+--..+ ++.+......+||.|.+-|+ ..+ ++.
T Consensus 365 gHq~lVn~V~fSPd~r~IASaSFDkS---VkLW~g~tGk~lasf-----RGHv~~VYqvawsaDsRLlV-S~S----kDs 431 (480)
T KOG0271|consen 365 GHQALVNHVSFSPDGRYIASASFDKS---VKLWDGRTGKFLASF-----RGHVAAVYQVAWSADSRLLV-SGS----KDS 431 (480)
T ss_pred chhhheeeEEECCCccEEEEeecccc---eeeeeCCCcchhhhh-----hhccceeEEEEeccCccEEE-EcC----CCc
Confidence 55566789999999998877665432 777777777543222 22223355789999998554 665 333
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEE
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYF 374 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~ 374 (790)
.|-++++.+.+ ....|.....++.. +.|+|||.+++-
T Consensus 432 --------TLKvw~V~tkK-----l~~DLpGh~DEVf~-vDwspDG~rV~s 468 (480)
T KOG0271|consen 432 --------TLKVWDVRTKK-----LKQDLPGHADEVFA-VDWSPDGQRVAS 468 (480)
T ss_pred --------eEEEEEeeeee-----ecccCCCCCceEEE-EEecCCCceeec
Confidence 68888888877 23347666667765 899999997643
No 137
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.99 E-value=1.8e-06 Score=90.63 Aligned_cols=185 Identities=16% Similarity=0.130 Sum_probs=96.8
Q ss_pred CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
......+.++|||++++..+.+.+.-.+|.++..+++...........+ ...+...|+|||+.+| +.. +..+
T Consensus 143 ~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G--~GPRh~~f~pdg~~~Y-v~~---e~s~-- 214 (345)
T PF10282_consen 143 GPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPG--SGPRHLAFSPDGKYAY-VVN---ELSN-- 214 (345)
T ss_dssp STCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTT--SSEEEEEE-TTSSEEE-EEE---TTTT--
T ss_pred cccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccC--CCCcEEEEcCCcCEEE-Eec---CCCC--
Confidence 3446788999999988888887766555555555554443222211111 0134689999999887 454 3444
Q ss_pred CcCcccEEEEEEcC--CCCcccCCCcccccCCC--eEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463 326 PVDSWDHLTFIDLD--DQAGIKDKVPVPLTRGR--FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI 401 (790)
Q Consensus 326 ~~~~~~~l~~~d~~--~~~~~~~~~~~~lt~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 401 (790)
.|.++++. +++.........+..+. ......+..+|||++||+..... ..|..++++..+++.+.+
T Consensus 215 ------~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~----~sI~vf~~d~~~g~l~~~ 284 (345)
T PF10282_consen 215 ------TVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGS----NSISVFDLDPATGTLTLV 284 (345)
T ss_dssp ------EEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTT----TEEEEEEECTTTTTEEEE
T ss_pred ------cEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccC----CEEEEEEEecCCCceEEE
Confidence 56666665 33200000000111110 00123378899999887765442 244444443222555544
Q ss_pred eecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEe
Q psy463 402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYW 452 (790)
Q Consensus 402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l 452 (790)
... . .+...-..+.++|||++++......+.=.++.+|.+++.+...
T Consensus 285 ~~~-~---~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~ 331 (345)
T PF10282_consen 285 QTV-P---TGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPV 331 (345)
T ss_dssp EEE-E---ESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred EEE-e---CCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEe
Confidence 331 0 0222346688999999998876555544455556667766543
No 138
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.99 E-value=1.2e-08 Score=98.19 Aligned_cols=115 Identities=19% Similarity=0.204 Sum_probs=80.9
Q ss_pred EEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchh
Q psy463 486 KLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIY 565 (790)
Q Consensus 486 ~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 565 (790)
.++.|. ..+.||+||++||..- ...|....... +++.||+|+.+|......... ..+++
T Consensus 7 ~v~~P~-----~~g~yPVv~f~~G~~~----~~s~Ys~ll~h-vAShGyIVV~~d~~~~~~~~~-----------~~~~~ 65 (259)
T PF12740_consen 7 LVYYPS-----SAGTYPVVLFLHGFLL----INSWYSQLLEH-VASHGYIVVAPDLYSIGGPDD-----------TDEVA 65 (259)
T ss_pred EEEecC-----CCCCcCEEEEeCCcCC----CHHHHHHHHHH-HHhCceEEEEecccccCCCCc-----------chhHH
Confidence 456676 4567999999999873 23332223333 445999999999655332111 14577
Q ss_pred HHHHHHHHHHHhC----C---CcCCCceEEEEechHHHHHHHHHhcCC----CCceEEEEEeCCCCC
Q psy463 566 DQINVTRYLQENL----P---YIDKTRTAIWGWSYGGYATGLALALDP----SNVFKCGISVAPVTD 621 (790)
Q Consensus 566 D~~~~~~~l~~~~----~---~~d~~ri~i~G~S~GG~~a~~~a~~~p----~~~~~~~v~~~~~~~ 621 (790)
+..+.++|+.+.+ + ..|.+|++|+|||.||-++..++..+. ...+++++++.|+..
T Consensus 66 ~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 66 SAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred HHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 7788888876532 1 258889999999999999998888652 137999999999863
No 139
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.96 E-value=1.7e-08 Score=98.83 Aligned_cols=251 Identities=15% Similarity=0.143 Sum_probs=85.8
Q ss_pred ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCC-CCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463 501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRN-SALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP 579 (790)
Q Consensus 501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG-~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 579 (790)
.-+||++-|...+-. .-.|... ....+...||.|+.+..+- ..++|..-.. .+++|+.++++|++...+
T Consensus 33 ~~~llfIGGLtDGl~-tvpY~~~-La~aL~~~~wsl~q~~LsSSy~G~G~~SL~--------~D~~eI~~~v~ylr~~~~ 102 (303)
T PF08538_consen 33 PNALLFIGGLTDGLL-TVPYLPD-LAEALEETGWSLFQVQLSSSYSGWGTSSLD--------RDVEEIAQLVEYLRSEKG 102 (303)
T ss_dssp SSEEEEE--TT--TT--STCHHH-HHHHHT-TT-EEEEE--GGGBTTS-S--HH--------HHHHHHHHHHHHHHHHS-
T ss_pred CcEEEEECCCCCCCC-CCchHHH-HHHHhccCCeEEEEEEecCccCCcCcchhh--------hHHHHHHHHHHHHHHhhc
Confidence 347888866544321 2222222 2333455799999998874 2334432221 568999999999998432
Q ss_pred -CcCCCceEEEEechHHHHHHHHHhcCCC----CceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccch
Q psy463 580 -YIDKTRTAIWGWSYGGYATGLALALDPS----NVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNK 654 (790)
Q Consensus 580 -~~d~~ri~i~G~S~GG~~a~~~a~~~p~----~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 654 (790)
....++|+|+|||-|..-++.++.+... ..+.++|+.+||+|.+........ ...+.+. ...
T Consensus 103 g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~-----------~~~~~~~--v~~ 169 (303)
T PF08538_consen 103 GHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGE-----------REAYEEL--VAL 169 (303)
T ss_dssp -----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH--------------HHHH--HHH
T ss_pred cccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccc-----------hHHHHHH--HHH
Confidence 1357899999999999999998887643 579999999999997653222111 0001100 011
Q ss_pred hhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhh----hhhhhhhhhccCCccEEE
Q psy463 655 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYK----IAALNNKVDRIRDKQYLL 730 (790)
Q Consensus 655 ~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~P~Li 730 (790)
++.+ +-.|..|...|........- +.+....++.....-......|. +..+...+.++ ..|+|+
T Consensus 170 A~~~------i~~g~~~~~lp~~~~~~~~~-----~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v-~~plLv 237 (303)
T PF08538_consen 170 AKEL------IAEGKGDEILPREFTPLVFY-----DTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKV-SKPLLV 237 (303)
T ss_dssp HHHH------HHCT-TT-GG----GGTTT------SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG---S-EEE
T ss_pred HHHH------HHcCCCCceeeccccccccC-----CCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccC-CCceEE
Confidence 1111 00112222111111000000 00000001111100000111111 11223456678 889999
Q ss_pred EecCCCcccchh-hhHHHHHHHHhcCC----ceEEEEcCCCCCcCCC-c----chHHHHHHHHHHH
Q psy463 731 VHGTMDDNVHFQ-QSMMLAKSLQHADI----MFQSQTYPDEEHGLIG-V----RPHFYHTLERFLD 786 (790)
Q Consensus 731 i~G~~D~~v~~~-~~~~l~~~l~~~g~----~~~~~~~p~~~H~~~~-~----~~~~~~~i~~fl~ 786 (790)
+.+++|+.||.. .-+.+.+.++.+-. .....++||++|.+.. . .+.+.+.+..||+
T Consensus 238 l~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 238 LYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp EEE--TT-----------------------------------------------------------
T ss_pred EecCCCceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 999999999864 33456666665432 2235589999999986 2 2356777787774
No 140
>KOG1407|consensus
Probab=98.92 E-value=1e-06 Score=81.74 Aligned_cols=274 Identities=16% Similarity=0.215 Sum_probs=149.3
Q ss_pred ecCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEE
Q psy463 7 LSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARIT 86 (790)
Q Consensus 7 ~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~ 86 (790)
+++..+++|.-||++||-.+. +..+.+|.+... . .......+.+.......-|.+...-++.+.. ....+.
T Consensus 20 ~~~v~Sv~wn~~g~~lasgs~-dktv~v~n~e~~--r----~~~~~~~~gh~~svdql~w~~~~~d~~atas--~dk~ir 90 (313)
T KOG1407|consen 20 VQKVHSVAWNCDGTKLASGSF-DKTVSVWNLERD--R----FRKELVYRGHTDSVDQLCWDPKHPDLFATAS--GDKTIR 90 (313)
T ss_pred hhcceEEEEcccCceeeeccc-CCceEEEEecch--h----hhhhhcccCCCcchhhheeCCCCCcceEEec--CCceEE
Confidence 566778999999999998776 445556655442 1 0000011111111223446543333322222 234566
Q ss_pred EeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccc
Q psy463 87 RCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR 166 (790)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~ 166 (790)
+++..+++|............ -.|||||+++++....+ .|..+|..+.++ ..--.
T Consensus 91 ~wd~r~~k~~~~i~~~~eni~------i~wsp~g~~~~~~~kdD-------------~it~id~r~~~~------~~~~~ 145 (313)
T KOG1407|consen 91 IWDIRSGKCTARIETKGENIN------ITWSPDGEYIAVGNKDD-------------RITFIDARTYKI------VNEEQ 145 (313)
T ss_pred EEEeccCcEEEEeeccCcceE------EEEcCCCCEEEEecCcc-------------cEEEEEecccce------eehhc
Confidence 788888888765554332222 38999999999866322 577777544321 11112
Q ss_pred cceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCC
Q psy463 167 GRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVE 246 (790)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~ 246 (790)
..+++.++..+ -.++ ++|...- . +-+-++....-++ ...|+ ..+
T Consensus 146 ~~~e~ne~~w~-~~nd--~Fflt~G-----l------G~v~ILsypsLkp-----v~si~-----------------AH~ 189 (313)
T KOG1407|consen 146 FKFEVNEISWN-NSND--LFFLTNG-----L------GCVEILSYPSLKP-----VQSIK-----------------AHP 189 (313)
T ss_pred ccceeeeeeec-CCCC--EEEEecC-----C------ceEEEEecccccc-----ccccc-----------------cCC
Confidence 24556666444 3332 6666531 1 2333333322221 12233 334
Q ss_pred CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463 247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP 326 (790)
Q Consensus 247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~ 326 (790)
..---+.++||||+++.-.-+ ..+-+.|++.--|.+.+..- .| +....+||.||+.|+ .++ .+-
T Consensus 190 snCicI~f~p~GryfA~GsAD---AlvSLWD~~ELiC~R~isRl---dw--pVRTlSFS~dg~~lA-SaS----EDh--- 253 (313)
T KOG1407|consen 190 SNCICIEFDPDGRYFATGSAD---ALVSLWDVDELICERCISRL---DW--PVRTLSFSHDGRMLA-SAS----EDH--- 253 (313)
T ss_pred cceEEEEECCCCceEeecccc---ceeeccChhHhhhheeeccc---cC--ceEEEEeccCcceee-ccC----ccc---
Confidence 455678999999966654322 23667777766665554431 22 367899999999998 666 222
Q ss_pred cCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 327 VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
+ |=+.++++|. +...+.... . ...++|.|....|+|...+
T Consensus 254 ---~--IDIA~vetGd-----~~~eI~~~~-~-t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 254 ---F--IDIAEVETGD-----RVWEIPCEG-P-TFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred ---e--EEeEecccCC-----eEEEeeccC-C-ceeEEecCCCceeeEEecC
Confidence 2 3344555665 132332211 1 1237899999999999877
No 141
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.92 E-value=2.8e-09 Score=107.14 Aligned_cols=136 Identities=21% Similarity=0.258 Sum_probs=81.0
Q ss_pred CcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcC---CeEEEEEcCCCCCCChhhhH---
Q psy463 480 NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNK---DIVVAYIDGRNSALKGNTLK--- 552 (790)
Q Consensus 480 g~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~---G~~v~~~d~rG~~~~g~~~~--- 552 (790)
|.....++++|+++. ..+++|+|+++||.... ...+.. .....+..+. -.++++++..+.......+.
T Consensus 5 g~~~~~~VylP~~y~--~~~~~PvlylldG~~~~---~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~ 79 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYD--PSKPYPVLYLLDGQSGW---FRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPA 79 (251)
T ss_dssp TEEEEEEEEECTTGG--TTTTEEEEEEESHTTHH---HHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSB
T ss_pred CCeEEEEEEECCCCC--CCCCCEEEEEccCCccc---cccchHHHHHHHHHHhCCCCceEEEEEeccccccccccccccc
Confidence 567888999999986 78999999999995111 111111 1222233321 24556666544331100000
Q ss_pred ---hhhhccCCccchhHHH--HHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCc
Q psy463 553 ---YAGYRRLGTVEIYDQI--NVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDW 622 (790)
Q Consensus 553 ---~~~~~~~~~~~~~D~~--~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~ 622 (790)
.......+...+.+.+ +.+.++.++++ ++..+.+|+|+||||+.|+.++.++|+ .|.++++.+|..+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~el~p~i~~~~~-~~~~~~~i~G~S~GG~~Al~~~l~~Pd-~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 80 GSSRRADDSGGGDAYETFLTEELIPYIEANYR-TDPDRRAIAGHSMGGYGALYLALRHPD-LFGAVIAFSGALDP 152 (251)
T ss_dssp CTTCBCTSTTTHHHHHHHHHTHHHHHHHHHSS-EEECCEEEEEETHHHHHHHHHHHHSTT-TESEEEEESEESET
T ss_pred ccccccccCCCCcccceehhccchhHHHHhcc-cccceeEEeccCCCcHHHHHHHHhCcc-ccccccccCccccc
Confidence 0000011111222222 34556666555 555559999999999999999999996 99999999987553
No 142
>KOG2624|consensus
Probab=98.91 E-value=3e-08 Score=102.51 Aligned_cols=300 Identities=14% Similarity=0.101 Sum_probs=172.8
Q ss_pred ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc----chHHHHHhcCCeEEEEEcCCCC
Q psy463 469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV----DWNLYLADNKDIVVAYIDGRNS 544 (790)
Q Consensus 469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~----~~~~~~~~~~G~~v~~~d~rG~ 544 (790)
+.|...+++.||. +-...-.|.. ..++|+|++.||...+ ...|-. .-...+++++||.|..-|.||.
T Consensus 47 ~~E~h~V~T~DgY-iL~lhRIp~~-----~~~rp~Vll~HGLl~s---S~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn 117 (403)
T KOG2624|consen 47 PVEEHEVTTEDGY-ILTLHRIPRG-----KKKRPVVLLQHGLLAS---SSSWVLNGPEQSLAFLLADAGYDVWLGNNRGN 117 (403)
T ss_pred ceEEEEEEccCCe-EEEEeeecCC-----CCCCCcEEEeeccccc---cccceecCccccHHHHHHHcCCceeeecCcCc
Confidence 4677888888998 4445555653 3678999999998766 333432 2345678889999999999995
Q ss_pred CCChhhhHhhh------h--ccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC--CceEEEE
Q psy463 545 ALKGNTLKYAG------Y--RRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS--NVFKCGI 614 (790)
Q Consensus 545 ~~~g~~~~~~~------~--~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~~v 614 (790)
.. ++...... + -+|.....+|+.+.++++.+. ...+++..+|||.|+.....++...|. +.++..+
T Consensus 118 ~y-Sr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~---T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~ 193 (403)
T KOG2624|consen 118 TY-SRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEK---TGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFI 193 (403)
T ss_pred cc-chhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHh---ccccceEEEEEEccchhheehhcccchhhhhhheee
Confidence 43 33211111 1 123334578999999999883 456899999999999999988887753 4688999
Q ss_pred EeCCCCCccc---ccccc----------hhhhcCCCCccCchhh---h-hhccc-cchh----------------hhccC
Q psy463 615 SVAPVTDWIY---YDTIY----------SERYMGLPTFEDNLEG---Y-KIAAL-NNKV----------------DRIRD 660 (790)
Q Consensus 615 ~~~~~~~~~~---~~~~~----------~~~~~g~~~~~~~~~~---~-~~~~~-~~~~----------------~~~~~ 660 (790)
+.+|+..... ..... ...++|...+...... + ..... .... .++..
T Consensus 194 aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~ 273 (403)
T KOG2624|consen 194 ALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNT 273 (403)
T ss_pred eecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhh
Confidence 9999874431 10000 0011111100000000 0 00000 0000 00000
Q ss_pred CcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccc
Q psy463 661 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH 740 (790)
Q Consensus 661 ~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~ 740 (790)
....+..+....-+...+...+.+...... +....|.. .....++-+...|...+.++ ++|+.+.+|..|..+.
T Consensus 274 ~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~--f~~yD~G~---~~N~~~Y~q~~pP~Y~l~~i-~~P~~l~~g~~D~l~~ 347 (403)
T KOG2624|consen 274 TLLPVYLAHLPAGTSVKNIVHWAQIVRSGK--FRKYDYGS---KRNLKHYGQSTPPEYDLTNI-KVPTALYYGDNDWLAD 347 (403)
T ss_pred cccchhhccCCCCccHHHHHHHHHHhcCCC--ccccCCCc---cccHhhcCCCCCCCCCcccc-ccCEEEEecCCcccCC
Confidence 000011111111122222222222222211 11111110 01111222344567888999 9999999999999999
Q ss_pred hhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC----cchHHHHHHHHHHHHh
Q psy463 741 FQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG----VRPHFYHTLERFLDSC 788 (790)
Q Consensus 741 ~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~i~~fl~~~ 788 (790)
++....+...+..... ...+-+++-+|.-.. .++.++..|++.+++.
T Consensus 348 ~~DV~~~~~~~~~~~~-~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 348 PEDVLILLLVLPNSVI-KYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLF 398 (403)
T ss_pred HHHHHHHHHhcccccc-cccccCCCccceeeeeccCcHHHHHHHHHHHHHhh
Confidence 9999988888887654 333337888886443 6889999999988754
No 143
>KOG0318|consensus
Probab=98.90 E-value=6.1e-06 Score=84.20 Aligned_cols=112 Identities=12% Similarity=0.185 Sum_probs=62.2
Q ss_pred ceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCC
Q psy463 301 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGS 380 (790)
Q Consensus 301 ~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~ 380 (790)
..+.+||++.++ +.. .+| .|+++.+.+++..+ ...+......+.. +++|||+++|+.....
T Consensus 448 ~vAv~~~~~~va-VGG----~Dg--------kvhvysl~g~~l~e---e~~~~~h~a~iT~-vaySpd~~yla~~Da~-- 508 (603)
T KOG0318|consen 448 AVAVSPDGSEVA-VGG----QDG--------KVHVYSLSGDELKE---EAKLLEHRAAITD-VAYSPDGAYLAAGDAS-- 508 (603)
T ss_pred eEEEcCCCCEEE-Eec----ccc--------eEEEEEecCCcccc---eeeeecccCCceE-EEECCCCcEEEEeccC--
Confidence 456677777665 343 455 46666666644111 2234444444444 7899999966554333
Q ss_pred CceEEEEEEEcCCCCCCc--ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463 381 PIVQHMYRINIADPTATP--ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG 446 (790)
Q Consensus 381 ~~~~~l~~~~~~~~~~~~--~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~ 446 (790)
+.+..++..+ .+. ..... +...+..++|||+.+.++-..- --.|++++++.
T Consensus 509 ---rkvv~yd~~s--~~~~~~~w~F-------HtakI~~~aWsP~n~~vATGSl---Dt~Viiysv~k 561 (603)
T KOG0318|consen 509 ---RKVVLYDVAS--REVKTNRWAF-------HTAKINCVAWSPNNKLVATGSL---DTNVIIYSVKK 561 (603)
T ss_pred ---CcEEEEEccc--Cceecceeee-------eeeeEEEEEeCCCceEEEeccc---cceEEEEEccC
Confidence 5666666655 332 11111 2345667899999987654322 23466666543
No 144
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.88 E-value=3e-08 Score=103.77 Aligned_cols=115 Identities=29% Similarity=0.274 Sum_probs=60.6
Q ss_pred CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCC-CCC---C--hhhhHhhh-------------hcc
Q psy463 498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRN-SAL---K--GNTLKYAG-------------YRR 558 (790)
Q Consensus 498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG-~~~---~--g~~~~~~~-------------~~~ 558 (790)
..++|+|||.||..+... .++ .++..+++ +||+|++++.|. ++. . ...-.... ...
T Consensus 97 ~~~~PvvIFSHGlgg~R~---~yS-~~~~eLAS-~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T PF03403_consen 97 PGKFPVVIFSHGLGGSRT---SYS-AICGELAS-HGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRD 171 (379)
T ss_dssp SS-EEEEEEE--TT--TT---TTH-HHHHHHHH-TT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE---
T ss_pred CCCCCEEEEeCCCCcchh---hHH-HHHHHHHh-CCeEEEEeccCCCceeEEEeccCCCccccccccccccccceecccc
Confidence 367999999999988743 333 24455555 899999999994 322 1 11100000 000
Q ss_pred C------------CccchhHHHHHHHHHHHh-------------------CCCcCCCceEEEEechHHHHHHHHHhcCCC
Q psy463 559 L------------GTVEIYDQINVTRYLQEN-------------------LPYIDKTRTAIWGWSYGGYATGLALALDPS 607 (790)
Q Consensus 559 ~------------~~~~~~D~~~~~~~l~~~-------------------~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~ 607 (790)
. ....+.|+..+++.|..- .+.+|.++|+++|||+||..++.++...
T Consensus 172 ~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-- 249 (379)
T PF03403_consen 172 FDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-- 249 (379)
T ss_dssp --GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH---
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc--
Confidence 0 001244555555555320 1346778999999999999999988876
Q ss_pred CceEEEEEeCCC
Q psy463 608 NVFKCGISVAPV 619 (790)
Q Consensus 608 ~~~~~~v~~~~~ 619 (790)
.+++++|+..|+
T Consensus 250 ~r~~~~I~LD~W 261 (379)
T PF03403_consen 250 TRFKAGILLDPW 261 (379)
T ss_dssp TT--EEEEES--
T ss_pred cCcceEEEeCCc
Confidence 489999998885
No 145
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.88 E-value=4.9e-08 Score=90.72 Aligned_cols=53 Identities=13% Similarity=0.274 Sum_probs=41.0
Q ss_pred CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHH
Q psy463 725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFL 785 (790)
Q Consensus 725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl 785 (790)
..++++++++.|++++.+.+...+.. +..++.+|.+|.+.. -++.+..|.+|+
T Consensus 134 ~~~~lvll~~~DEvLd~~~a~~~~~~-------~~~~i~~ggdH~f~~-f~~~l~~i~~f~ 186 (187)
T PF05728_consen 134 PERYLVLLQTGDEVLDYREAVAKYRG-------CAQIIEEGGDHSFQD-FEEYLPQIIAFL 186 (187)
T ss_pred CccEEEEEecCCcccCHHHHHHHhcC-------ceEEEEeCCCCCCcc-HHHHHHHHHHhh
Confidence 57999999999999999776665542 244566788999984 667778888886
No 146
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.88 E-value=2.1e-08 Score=91.54 Aligned_cols=262 Identities=14% Similarity=0.074 Sum_probs=140.2
Q ss_pred EEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhH
Q psy463 473 MSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLK 552 (790)
Q Consensus 473 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~ 552 (790)
..+...||..+.+..+-..+ +.+-.+++-|+.+. ...|. .-...+++++||.|+..||||.+++.-.-.
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~-------~~~g~~~va~a~Gv---~~~fY-RrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~ 76 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG-------KASGRLVVAGATGV---GQYFY-RRFAAAAAKAGFEVLTFDYRGIGQSRPASL 76 (281)
T ss_pred cccccCCCccCccccccCCC-------CCCCcEEecccCCc---chhHh-HHHHHHhhccCceEEEEecccccCCCcccc
Confidence 45667799999988874332 12223444555554 11222 222345667999999999999887654433
Q ss_pred hhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCC--CCCcccccccch
Q psy463 553 YAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAP--VTDWIYYDTIYS 630 (790)
Q Consensus 553 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~--~~~~~~~~~~~~ 630 (790)
....-.+......|+.++++++.+..+ ......+|||+||.+...+.. ++ ..-.+.+.+++ +..+......+.
T Consensus 77 ~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~gagwsg~m~~~~~l~ 151 (281)
T COG4757 77 SGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGSGAGWSGWMGLRERLG 151 (281)
T ss_pred ccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeeccccc-Cc-ccceeeEeccccccccchhhhhccc
Confidence 322233444567889999999987444 457899999999988776655 33 12223332222 222211100000
Q ss_pred hhhc---CCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCc
Q psy463 631 ERYM---GLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDN 707 (790)
Q Consensus 631 ~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 707 (790)
...+ ..| +..+. ...+ ..- +-|..+ +.|-..-.+..+..+.... |...|.
T Consensus 152 ~~~l~~lv~p-----~lt~w-------~g~~--p~~--l~G~G~-d~p~~v~RdW~RwcR~p~y------~fddp~---- 204 (281)
T COG4757 152 AVLLWNLVGP-----PLTFW-------KGYM--PKD--LLGLGS-DLPGTVMRDWARWCRHPRY------YFDDPA---- 204 (281)
T ss_pred ceeecccccc-----chhhc-------cccC--cHh--hcCCCc-cCcchHHHHHHHHhcCccc------cccChh----
Confidence 0000 000 00000 0000 000 012221 1121111222221111100 111110
Q ss_pred chhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCC----CCCcCCC-cc-hHHHHHH
Q psy463 708 LEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPD----EEHGLIG-VR-PHFYHTL 781 (790)
Q Consensus 708 ~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~----~~H~~~~-~~-~~~~~~i 781 (790)
.....+..+.+ .+|++.+-...|+-+|+.....+.+...++. .+...++. .||+-.. ++ +.+.+.+
T Consensus 205 -----~~~~~q~yaaV-rtPi~~~~~~DD~w~P~As~d~f~~~y~nAp--l~~~~~~~~~~~lGH~gyfR~~~Ealwk~~ 276 (281)
T COG4757 205 -----MRNYRQVYAAV-RTPITFSRALDDPWAPPASRDAFASFYRNAP--LEMRDLPRAEGPLGHMGYFREPFEALWKEM 276 (281)
T ss_pred -----HhHHHHHHHHh-cCceeeeccCCCCcCCHHHHHHHHHhhhcCc--ccceecCcccCcccchhhhccchHHHHHHH
Confidence 11112456777 9999999999999999999999999888774 46666654 3786554 33 7788888
Q ss_pred HHHH
Q psy463 782 ERFL 785 (790)
Q Consensus 782 ~~fl 785 (790)
++|+
T Consensus 277 L~w~ 280 (281)
T COG4757 277 LGWF 280 (281)
T ss_pred HHhh
Confidence 8886
No 147
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.87 E-value=2.9e-07 Score=87.24 Aligned_cols=166 Identities=9% Similarity=0.164 Sum_probs=102.6
Q ss_pred EEEEEEccCCc-EEEEEecc--C------cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc
Q psy463 249 LSRVNWANESV-VAAWVNRV--Q------NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ 319 (790)
Q Consensus 249 ~~~~~wspDg~-~~~~~~r~--~------~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~ 319 (790)
...+.|+|+|+ ++..+.+. . +...||.++..+.....+.-... +....++|||+|+.|+++..
T Consensus 8 ~~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~-----~~I~~~~WsP~g~~favi~g--- 79 (194)
T PF08662_consen 8 DAKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKE-----GPIHDVAWSPNGNEFAVIYG--- 79 (194)
T ss_pred eEEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCC-----CceEEEEECcCCCEEEEEEc---
Confidence 35788999999 44444421 1 12568888877666555533221 12458999999999986554
Q ss_pred ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc
Q psy463 320 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE 399 (790)
Q Consensus 320 ~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 399 (790)
..+ ..+.++|+++.. ...+.... . ..+.|||+|+.|++.+..+.. ..|...+... .+
T Consensus 80 ~~~--------~~v~lyd~~~~~------i~~~~~~~--~-n~i~wsP~G~~l~~~g~~n~~--G~l~~wd~~~----~~ 136 (194)
T PF08662_consen 80 SMP--------AKVTLYDVKGKK------IFSFGTQP--R-NTISWSPDGRFLVLAGFGNLN--GDLEFWDVRK----KK 136 (194)
T ss_pred cCC--------cccEEEcCcccE------eEeecCCC--c-eEEEECCCCCEEEEEEccCCC--cEEEEEECCC----CE
Confidence 122 257777776443 34443322 2 237899999998887755322 4555666543 23
Q ss_pred eeeecccccCCCcccEEEEEEecCCcEEEEEeecCC---CCeEEEEecCCCeEEE
Q psy463 400 CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG---IPEIMLFDKTGQRLLY 451 (790)
Q Consensus 400 ~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~---~~~i~~~~~~~~~~~~ 451 (790)
++... .......+.|||||++++.....+. -..+.+++..|+.+..
T Consensus 137 ~i~~~------~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~~l~~ 185 (194)
T PF08662_consen 137 KISTF------EHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGRLLYK 185 (194)
T ss_pred Eeecc------ccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCeEeEe
Confidence 33321 2334677899999999998766543 4557777777665543
No 148
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.86 E-value=2.9e-06 Score=86.56 Aligned_cols=221 Identities=16% Similarity=0.187 Sum_probs=125.2
Q ss_pred ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463 115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES 194 (790)
Q Consensus 115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (790)
.|+|+++.|+.... + +.|.++++.+++ ....+......+.. ..|++++. +++...
T Consensus 58 ~~~~~~~~l~~~~~-~------------~~i~i~~~~~~~-----~~~~~~~~~~~i~~-~~~~~~~~--~~~~~~---- 112 (289)
T cd00200 58 AASADGTYLASGSS-D------------KTIRLWDLETGE-----CVRTLTGHTSYVSS-VAFSPDGR--ILSSSS---- 112 (289)
T ss_pred EECCCCCEEEEEcC-C------------CeEEEEEcCccc-----ceEEEeccCCcEEE-EEEcCCCC--EEEEec----
Confidence 67888877665442 1 278888887652 22333322222222 34555422 333332
Q ss_pred CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEE
Q psy463 195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARIT 274 (790)
Q Consensus 195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~ 274 (790)
....|.++++.+++. ...+. .....+..+.|+|++++++....+. .+.
T Consensus 113 -------~~~~i~~~~~~~~~~-----~~~~~-----------------~~~~~i~~~~~~~~~~~l~~~~~~~---~i~ 160 (289)
T cd00200 113 -------RDKTIKVWDVETGKC-----LTTLR-----------------GHTDWVNSVAFSPDGTFVASSSQDG---TIK 160 (289)
T ss_pred -------CCCeEEEEECCCcEE-----EEEec-----------------cCCCcEEEEEEcCcCCEEEEEcCCC---cEE
Confidence 125788888875442 11111 2344578899999988666554221 388
Q ss_pred EEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccC
Q psy463 275 RCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR 354 (790)
Q Consensus 275 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~ 354 (790)
++++.+++......... .......|+|+|+.++ +.+ .+| .|.++|+..++ ....+..
T Consensus 161 i~d~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~-~~~----~~~--------~i~i~d~~~~~-----~~~~~~~ 217 (289)
T cd00200 161 LWDLRTGKCVATLTGHT-----GEVNSVAFSPDGEKLL-SSS----SDG--------TIKLWDLSTGK-----CLGTLRG 217 (289)
T ss_pred EEEccccccceeEecCc-----cccceEEECCCcCEEE-Eec----CCC--------cEEEEECCCCc-----eecchhh
Confidence 88988776554443221 1245789999998887 444 245 68888987665 1333423
Q ss_pred CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463 355 GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLS 430 (790)
Q Consensus 355 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~ 430 (790)
....+.. +.|++++..+ +.+... ..|+.+++.. ++. ..+.. ....+..+.|++++++++..
T Consensus 218 ~~~~i~~-~~~~~~~~~~-~~~~~~----~~i~i~~~~~--~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~ 279 (289)
T cd00200 218 HENGVNS-VAFSPDGYLL-ASGSED----GTIRVWDLRT--GECVQTLSG-------HTNSVTSLAWSPDGKRLASG 279 (289)
T ss_pred cCCceEE-EEEcCCCcEE-EEEcCC----CcEEEEEcCC--ceeEEEccc-------cCCcEEEEEECCCCCEEEEe
Confidence 3333444 7899996544 444321 3566666654 222 22221 34467789999998877654
No 149
>KOG3101|consensus
Probab=98.85 E-value=2.3e-08 Score=89.55 Aligned_cols=135 Identities=23% Similarity=0.314 Sum_probs=86.2
Q ss_pred cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc-chHHHHHhcCCeEEEEEc--CCCCCCChhh----hHh
Q psy463 481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV-DWNLYLADNKDIVVAYID--GRNSALKGNT----LKY 553 (790)
Q Consensus 481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~-~~~~~~~~~~G~~v~~~d--~rG~~~~g~~----~~~ 553 (790)
..+..-+|+|+.+. .+++.|+|+++-|.... .+.+.. ...++.+++.|++|+.|| .||...-|.+ |..
T Consensus 26 c~Mtf~vylPp~a~--~~k~~P~lf~LSGLTCT---~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~ 100 (283)
T KOG3101|consen 26 CSMTFGVYLPPDAP--RGKRCPVLFYLSGLTCT---HENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQ 100 (283)
T ss_pred cceEEEEecCCCcc--cCCcCceEEEecCCccc---chhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccC
Confidence 34556688898876 67779999999998776 223321 234566677999999999 4564322211 111
Q ss_pred -------hhhccCCc-cchhHHHHHHHHHHH----hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463 554 -------AGYRRLGT-VEIYDQINVTRYLQE----NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD 621 (790)
Q Consensus 554 -------~~~~~~~~-~~~~D~~~~~~~l~~----~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~ 621 (790)
+....|.. +.++|. .++.|.+ ..--+|..|++|+||||||.-|+..+.+.|. +++.+-+.+|+.+
T Consensus 101 GAGFYvnAt~epw~~~yrMYdY--v~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~-kykSvSAFAPI~N 177 (283)
T KOG3101|consen 101 GAGFYVNATQEPWAKHYRMYDY--VVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPS-KYKSVSAFAPICN 177 (283)
T ss_pred CceeEEecccchHhhhhhHHHH--HHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcc-cccceeccccccC
Confidence 00011111 122222 1222211 1123788899999999999999999988886 8999999999987
Q ss_pred cc
Q psy463 622 WI 623 (790)
Q Consensus 622 ~~ 623 (790)
..
T Consensus 178 P~ 179 (283)
T KOG3101|consen 178 PI 179 (283)
T ss_pred cc
Confidence 54
No 150
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.84 E-value=2.2e-06 Score=93.14 Aligned_cols=276 Identities=12% Similarity=0.142 Sum_probs=155.3
Q ss_pred ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463 113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ 192 (790)
Q Consensus 113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (790)
...+||||++++|..+..+.. +.+|+++|+++++. +...+. ..-.....|.+++.. ++|.+...
T Consensus 128 ~~~~Spdg~~la~~~s~~G~e--------~~~l~v~Dl~tg~~----l~d~i~---~~~~~~~~W~~d~~~-~~y~~~~~ 191 (414)
T PF02897_consen 128 GFSVSPDGKRLAYSLSDGGSE--------WYTLRVFDLETGKF----LPDGIE---NPKFSSVSWSDDGKG-FFYTRFDE 191 (414)
T ss_dssp EEEETTTSSEEEEEEEETTSS--------EEEEEEEETTTTEE----EEEEEE---EEESEEEEECTTSSE-EEEEECST
T ss_pred eeeECCCCCEEEEEecCCCCc--------eEEEEEEECCCCcC----cCCccc---ccccceEEEeCCCCE-EEEEEeCc
Confidence 347899999999987655432 45899999988841 111111 111112678776553 56665433
Q ss_pred CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEE-eccCcce
Q psy463 193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWV-NRVQNRA 271 (790)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~-~r~~~~~ 271 (790)
...+. --.....||+..+.++.... ..+ +.+. ........+.+|+||++++.. .+.....
T Consensus 192 ~~~~~-~~~~~~~v~~~~~gt~~~~d----~lv------------fe~~--~~~~~~~~~~~s~d~~~l~i~~~~~~~~s 252 (414)
T PF02897_consen 192 DQRTS-DSGYPRQVYRHKLGTPQSED----ELV------------FEEP--DEPFWFVSVSRSKDGRYLFISSSSGTSES 252 (414)
T ss_dssp TTSS--CCGCCEEEEEEETTS-GGG-----EEE------------EC-T--TCTTSEEEEEE-TTSSEEEEEEESSSSEE
T ss_pred ccccc-cCCCCcEEEEEECCCChHhC----eeE------------Eeec--CCCcEEEEEEecCcccEEEEEEEccccCC
Confidence 22110 00224689999988764310 111 1111 222236678999999955544 4433347
Q ss_pred EEEEEECCCC-----ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccC
Q psy463 272 RITRCSINEG-----TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD 346 (790)
Q Consensus 272 ~i~~~~~~~g-----~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~ 346 (790)
.+|++++..+ ..+.+..... . . .......|..+++... .+.. ...|+.++++.....
T Consensus 253 ~v~~~d~~~~~~~~~~~~~l~~~~~-~-----~-~~~v~~~~~~~yi~Tn----~~a~-----~~~l~~~~l~~~~~~-- 314 (414)
T PF02897_consen 253 EVYLLDLDDGGSPDAKPKLLSPRED-G-----V-EYYVDHHGDRLYILTN----DDAP-----NGRLVAVDLADPSPA-- 314 (414)
T ss_dssp EEEEEECCCTTTSS-SEEEEEESSS-S-------EEEEEEETTEEEEEE-----TT-T-----T-EEEEEETTSTSGG--
T ss_pred eEEEEeccccCCCcCCcEEEeCCCC-c-----e-EEEEEccCCEEEEeeC----CCCC-----CcEEEEecccccccc--
Confidence 8999999875 4555554321 1 1 1112222666775554 2221 458999998765400
Q ss_pred CCcc-cccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC-CCCCCcceeeecccccCCCcccEEEEEEecCC
Q psy463 347 KVPV-PLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA-DPTATPECITCDLLTSANQKCSYSGATFSTNV 424 (790)
Q Consensus 347 ~~~~-~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg 424 (790)
... .|......+. +-.++..++.|++....+. ..+|.++++. + .....+... ..+.+...+..+++
T Consensus 315 -~~~~~l~~~~~~~~-l~~~~~~~~~Lvl~~~~~~--~~~l~v~~~~~~--~~~~~~~~p------~~g~v~~~~~~~~~ 382 (414)
T PF02897_consen 315 -EWWTVLIPEDEDVS-LEDVSLFKDYLVLSYRENG--SSRLRVYDLDDG--KESREIPLP------EAGSVSGVSGDFDS 382 (414)
T ss_dssp -GEEEEEE--SSSEE-EEEEEEETTEEEEEEEETT--EEEEEEEETT-T--EEEEEEESS------SSSEEEEEES-TT-
T ss_pred -cceeEEcCCCCcee-EEEEEEECCEEEEEEEECC--ccEEEEEECCCC--cEEeeecCC------cceEEeccCCCCCC
Confidence 011 2333222111 1345556777887776632 3789999998 4 333333321 33455666777889
Q ss_pred cEEEEEeecCC-CCeEEEEecCCCeEEEec
Q psy463 425 SYYVLSCIGPG-IPEIMLFDKTGQRLLYWD 453 (790)
Q Consensus 425 ~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~ 453 (790)
..+.+++++.. |+.+|.+|+++++.+.+.
T Consensus 383 ~~~~~~~ss~~~P~~~y~~d~~t~~~~~~k 412 (414)
T PF02897_consen 383 DELRFSYSSFTTPPTVYRYDLATGELTLLK 412 (414)
T ss_dssp SEEEEEEEETTEEEEEEEEETTTTCEEEEE
T ss_pred CEEEEEEeCCCCCCEEEEEECCCCCEEEEE
Confidence 99999999998 999999999998777653
No 151
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.83 E-value=3.9e-07 Score=87.13 Aligned_cols=104 Identities=14% Similarity=0.098 Sum_probs=72.1
Q ss_pred CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463 499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL 578 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 578 (790)
....+||-+||.||+- .. +.+....+.+.|++++.+|++|.+........ ...-.+-...++.+.+++
T Consensus 33 s~~gTVv~~hGsPGSH---~D--FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~-------~~~n~er~~~~~~ll~~l 100 (297)
T PF06342_consen 33 SPLGTVVAFHGSPGSH---ND--FKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQ-------QYTNEERQNFVNALLDEL 100 (297)
T ss_pred CCceeEEEecCCCCCc---cc--hhhhhhHHHHcCeEEEEeCCCCCCCCCCCccc-------ccChHHHHHHHHHHHHHc
Confidence 4456899999999983 33 44666777789999999999997653322110 122334445566666645
Q ss_pred CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463 579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV 619 (790)
Q Consensus 579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~ 619 (790)
+ ++ .++..+|||.|+-.|+.++..+| ..++++++|+
T Consensus 101 ~-i~-~~~i~~gHSrGcenal~la~~~~---~~g~~lin~~ 136 (297)
T PF06342_consen 101 G-IK-GKLIFLGHSRGCENALQLAVTHP---LHGLVLINPP 136 (297)
T ss_pred C-CC-CceEEEEeccchHHHHHHHhcCc---cceEEEecCC
Confidence 4 54 78999999999999999999875 3455655554
No 152
>KOG2096|consensus
Probab=98.81 E-value=1.4e-06 Score=83.09 Aligned_cols=150 Identities=13% Similarity=0.038 Sum_probs=82.7
Q ss_pred CEEEEEEEccCCcEEEEEeccCc---ceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 247 PVLSRVNWANESVVAAWVNRVQN---RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 247 ~~~~~~~wspDg~~~~~~~r~~~---~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
......+.|||||+++...-..+ ..-||.-|-.=.+..++++-.+.. .....++|||+..+++ +++ ++|
T Consensus 229 ~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~---saV~~~aFsn~S~r~v-tvS----kDG 300 (420)
T KOG2096|consen 229 SSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQ---SAVLAAAFSNSSTRAV-TVS----KDG 300 (420)
T ss_pred ccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccch---hheeeeeeCCCcceeE-EEe----cCC
Confidence 34457889999996665433222 112333222112334444433211 1245789999999998 787 788
Q ss_pred CCCcCcccEEEEEEcC--CCCcccCCCcccccCCC--------eEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463 324 STPVDSWDHLTFIDLD--DQAGIKDKVPVPLTRGR--------FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~--~~~~~~~~~~~~lt~~~--------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
...||-.|+. .++ .++.|-.+. -.+ -++.+|.|+.++..... .|..+..+.
T Consensus 301 ------~wriwdtdVrY~~~q-----Dpk~Lk~g~~pl~aag~~p~--RL~lsP~g~~lA~s~gs------~l~~~~se~ 361 (420)
T KOG2096|consen 301 ------KWRIWDTDVRYEAGQ-----DPKILKEGSAPLHAAGSEPV--RLELSPSGDSLAVSFGS------DLKVFASED 361 (420)
T ss_pred ------cEEEeeccceEecCC-----CchHhhcCCcchhhcCCCce--EEEeCCCCcEEEeecCC------ceEEEEccc
Confidence 5567766653 122 133333221 112 26789999977665432 344444433
Q ss_pred CCCCcceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463 394 PTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLS 430 (790)
Q Consensus 394 ~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~ 430 (790)
+ ....++... ....+.+++|++||++++-.
T Consensus 362 g-~~~~~~e~~------h~~~Is~is~~~~g~~~atc 391 (420)
T KOG2096|consen 362 G-KDYPELEDI------HSTTISSISYSSDGKYIATC 391 (420)
T ss_pred C-ccchhHHHh------hcCceeeEEecCCCcEEeee
Confidence 1 223333321 34567889999999988543
No 153
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.78 E-value=4.9e-06 Score=86.12 Aligned_cols=250 Identities=13% Similarity=0.075 Sum_probs=128.1
Q ss_pred CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEee
Q psy463 10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCS 89 (790)
Q Consensus 10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~ 89 (790)
...+.|||||+.++.+...++. ++.+...+++... .... ........|++++..+.-..... ..+.+++
T Consensus 33 ~~~l~~~~dg~~l~~~~~~~~~--v~~~d~~~~~~~~------~~~~-~~~~~~~~~~~~g~~l~~~~~~~--~~l~~~d 101 (300)
T TIGR03866 33 PRGITLSKDGKLLYVCASDSDT--IQVIDLATGEVIG------TLPS-GPDPELFALHPNGKILYIANEDD--NLVTVID 101 (300)
T ss_pred CCceEECCCCCEEEEEECCCCe--EEEEECCCCcEEE------eccC-CCCccEEEECCCCCEEEEEcCCC--CeEEEEE
Confidence 4568899999987655544433 5555554443100 0000 11122345666665442222211 2466677
Q ss_pred CCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccce
Q psy463 90 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF 169 (790)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~ 169 (790)
..++++...+.... ......|+|||+.++....... .++.++..+++ ....+..+.
T Consensus 102 ~~~~~~~~~~~~~~------~~~~~~~~~dg~~l~~~~~~~~------------~~~~~d~~~~~-----~~~~~~~~~- 157 (300)
T TIGR03866 102 IETRKVLAEIPVGV------EPEGMAVSPDGKIVVNTSETTN------------MAHFIDTKTYE-----IVDNVLVDQ- 157 (300)
T ss_pred CCCCeEEeEeeCCC------CcceEEECCCCCEEEEEecCCC------------eEEEEeCCCCe-----EEEEEEcCC-
Confidence 76654433222110 1134589999998887553211 35556765542 111111111
Q ss_pred EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEE
Q psy463 170 TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVL 249 (790)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~ 249 (790)
.. .-..+++++. .++++.. ....|+++|+++++.. ..++.. .. .. .......
T Consensus 158 ~~-~~~~~s~dg~--~l~~~~~----------~~~~v~i~d~~~~~~~-----~~~~~~---~~---~~----~~~~~~~ 209 (300)
T TIGR03866 158 RP-RFAEFTADGK--ELWVSSE----------IGGTVSVIDVATRKVI-----KKITFE---IP---GV----HPEAVQP 209 (300)
T ss_pred Cc-cEEEECCCCC--EEEEEcC----------CCCEEEEEEcCcceee-----eeeeec---cc---cc----ccccCCc
Confidence 11 1245666654 4444321 1157888898876531 111100 00 00 0011112
Q ss_pred EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463 250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS 329 (790)
Q Consensus 250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~ 329 (790)
..+.|+|||+.++...... ..+.++|.++++......... ....+.|+|||+.|+ +.. ..+|
T Consensus 210 ~~i~~s~dg~~~~~~~~~~--~~i~v~d~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~-~~~---~~~~------ 271 (300)
T TIGR03866 210 VGIKLTKDGKTAFVALGPA--NRVAVVDAKTYEVLDYLLVGQ------RVWQLAFTPDEKYLL-TTN---GVSN------ 271 (300)
T ss_pred cceEECCCCCEEEEEcCCC--CeEEEEECCCCcEEEEEEeCC------CcceEEECCCCCEEE-EEc---CCCC------
Confidence 3578999999655443322 248888998887654333211 134789999999887 443 2344
Q ss_pred ccEEEEEEcCCCC
Q psy463 330 WDHLTFIDLDDQA 342 (790)
Q Consensus 330 ~~~l~~~d~~~~~ 342 (790)
.|.++|+.+++
T Consensus 272 --~i~v~d~~~~~ 282 (300)
T TIGR03866 272 --DVSVIDVAALK 282 (300)
T ss_pred --eEEEEECCCCc
Confidence 79999998876
No 154
>KOG0293|consensus
Probab=98.78 E-value=4.1e-07 Score=89.63 Aligned_cols=155 Identities=15% Similarity=0.178 Sum_probs=100.3
Q ss_pred EEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463 248 VLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP 326 (790)
Q Consensus 248 ~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~ 326 (790)
.+.-+.||||.+ +++...... +.+.|+.+|.+..++.... +. ...+-+|-|||..++ +.+ .++
T Consensus 271 ~V~yi~wSPDdryLlaCg~~e~----~~lwDv~tgd~~~~y~~~~--~~--S~~sc~W~pDg~~~V-~Gs----~dr--- 334 (519)
T KOG0293|consen 271 PVSYIMWSPDDRYLLACGFDEV----LSLWDVDTGDLRHLYPSGL--GF--SVSSCAWCPDGFRFV-TGS----PDR--- 334 (519)
T ss_pred ceEEEEECCCCCeEEecCchHh----eeeccCCcchhhhhcccCc--CC--CcceeEEccCCceeE-ecC----CCC---
Confidence 355689999999 555443322 8899999999987776531 11 145789999999987 555 334
Q ss_pred cCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccc
Q psy463 327 VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLL 406 (790)
Q Consensus 327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~ 406 (790)
+++.+|++++. ......-...-..-++.++||++++....+ .++..++.+. ...+.+..
T Consensus 335 -----~i~~wdlDgn~------~~~W~gvr~~~v~dlait~Dgk~vl~v~~d-----~~i~l~~~e~--~~dr~lis--- 393 (519)
T KOG0293|consen 335 -----TIIMWDLDGNI------LGNWEGVRDPKVHDLAITYDGKYVLLVTVD-----KKIRLYNREA--RVDRGLIS--- 393 (519)
T ss_pred -----cEEEecCCcch------hhcccccccceeEEEEEcCCCcEEEEEecc-----cceeeechhh--hhhhcccc---
Confidence 79999998864 222111111111226788999999888766 4566666554 22121222
Q ss_pred ccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463 407 TSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG 446 (790)
Q Consensus 407 ~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~ 446 (790)
....+.+.++|.|++++..... ..++.+.|++.
T Consensus 394 ----e~~~its~~iS~d~k~~LvnL~---~qei~LWDl~e 426 (519)
T KOG0293|consen 394 ----EEQPITSFSISKDGKLALVNLQ---DQEIHLWDLEE 426 (519)
T ss_pred ----ccCceeEEEEcCCCcEEEEEcc---cCeeEEeecch
Confidence 3457888999999998877643 34477777763
No 155
>KOG0271|consensus
Probab=98.77 E-value=1.5e-06 Score=85.01 Aligned_cols=98 Identities=14% Similarity=0.183 Sum_probs=59.8
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
.....|||||++|+ .++. +. -+-+++-.+|+ ....+..+-..+.. .+||.|.+.|+-.+.+
T Consensus 370 Vn~V~fSPd~r~IA-SaSF----Dk--------SVkLW~g~tGk-----~lasfRGHv~~VYq-vawsaDsRLlVS~SkD 430 (480)
T KOG0271|consen 370 VNHVSFSPDGRYIA-SASF----DK--------SVKLWDGRTGK-----FLASFRGHVAAVYQ-VAWSADSRLLVSGSKD 430 (480)
T ss_pred eeeEEECCCccEEE-Eeec----cc--------ceeeeeCCCcc-----hhhhhhhccceeEE-EEeccCccEEEEcCCC
Confidence 45689999999998 6762 22 36677777776 12223222223333 7999998755444433
Q ss_pred CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEE
Q psy463 379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYV 428 (790)
Q Consensus 379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~ 428 (790)
.. -.+|.+..+ .|..+ +++....++.+.|||||+.++
T Consensus 431 sT---LKvw~V~tk-------Kl~~D---LpGh~DEVf~vDwspDG~rV~ 467 (480)
T KOG0271|consen 431 ST---LKVWDVRTK-------KLKQD---LPGHADEVFAVDWSPDGQRVA 467 (480)
T ss_pred ce---EEEEEeeee-------eeccc---CCCCCceEEEEEecCCCceee
Confidence 22 456655432 23222 344667888999999999764
No 156
>KOG0318|consensus
Probab=98.76 E-value=1.3e-05 Score=81.96 Aligned_cols=148 Identities=14% Similarity=0.130 Sum_probs=82.9
Q ss_pred CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463 247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP 326 (790)
Q Consensus 247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~ 326 (790)
..+..+.+||||+.++.+..+. .++++|-.+|+..-.+... .+..+.....+||||+++|+ +++ .+-
T Consensus 191 kFV~~VRysPDG~~Fat~gsDg---ki~iyDGktge~vg~l~~~--~aHkGsIfalsWsPDs~~~~-T~S----aDk--- 257 (603)
T KOG0318|consen 191 KFVNCVRYSPDGSRFATAGSDG---KIYIYDGKTGEKVGELEDS--DAHKGSIFALSWSPDSTQFL-TVS----ADK--- 257 (603)
T ss_pred cceeeEEECCCCCeEEEecCCc---cEEEEcCCCccEEEEecCC--CCccccEEEEEECCCCceEE-Eec----CCc---
Confidence 4577899999999555554332 2999998888765444421 11222244799999999998 666 222
Q ss_pred cCcccEEEEEEcCCCCcccCCCcccccCCCe---EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463 327 VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF---TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC 403 (790)
Q Consensus 327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~ 403 (790)
.+-++|+.+++ ..+.+..+.- ...+ .-|- +..|+-.+..| .|-.++.+. ..+..+..
T Consensus 258 -----t~KIWdVs~~s-----lv~t~~~~~~v~dqqvG-~lWq--kd~lItVSl~G-----~in~ln~~d--~~~~~~i~ 317 (603)
T KOG0318|consen 258 -----TIKIWDVSTNS-----LVSTWPMGSTVEDQQVG-CLWQ--KDHLITVSLSG-----TINYLNPSD--PSVLKVIS 317 (603)
T ss_pred -----eEEEEEeeccc-----eEEEeecCCchhceEEE-EEEe--CCeEEEEEcCc-----EEEEecccC--CChhheec
Confidence 35667777766 2333443321 2223 3464 23344444442 222233332 12222221
Q ss_pred cccccCCCcccEEEEEEecCCcEEEEEeecC
Q psy463 404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGP 434 (790)
Q Consensus 404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~ 434 (790)
+++..+..++.++|+++| |+.+-.
T Consensus 318 ------GHnK~ITaLtv~~d~~~i-~SgsyD 341 (603)
T KOG0318|consen 318 ------GHNKSITALTVSPDGKTI-YSGSYD 341 (603)
T ss_pred ------ccccceeEEEEcCCCCEE-EeeccC
Confidence 256677788999999876 444333
No 157
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.76 E-value=3.7e-05 Score=75.64 Aligned_cols=175 Identities=11% Similarity=0.114 Sum_probs=104.0
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD 328 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~ 328 (790)
.....+.|||+++...+-+.++ |++++++.|..+.........+. ..+.+.|.|+||..| +.. |-++
T Consensus 147 ~H~a~~tP~~~~l~v~DLG~Dr--i~~y~~~dg~L~~~~~~~v~~G~--GPRHi~FHpn~k~aY-~v~---EL~s----- 213 (346)
T COG2706 147 VHSANFTPDGRYLVVPDLGTDR--IFLYDLDDGKLTPADPAEVKPGA--GPRHIVFHPNGKYAY-LVN---ELNS----- 213 (346)
T ss_pred cceeeeCCCCCEEEEeecCCce--EEEEEcccCccccccccccCCCC--CcceEEEcCCCcEEE-EEe---ccCC-----
Confidence 4567899999988888776554 77777777765443322111110 145789999999665 665 5555
Q ss_pred cccEEEEEEcCCCCcccCCCcccc----------cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc
Q psy463 329 SWDHLTFIDLDDQAGIKDKVPVPL----------TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP 398 (790)
Q Consensus 329 ~~~~l~~~d~~~~~~~~~~~~~~l----------t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 398 (790)
.-.++-++...++ .+.| +...+ ...+..++||+.||. ++++.. .--+|.++..+ ++.
T Consensus 214 -tV~v~~y~~~~g~------~~~lQ~i~tlP~dF~g~~~--~aaIhis~dGrFLYa-sNRg~d-sI~~f~V~~~~--g~L 280 (346)
T COG2706 214 -TVDVLEYNPAVGK------FEELQTIDTLPEDFTGTNW--AAAIHISPDGRFLYA-SNRGHD-SIAVFSVDPDG--GKL 280 (346)
T ss_pred -EEEEEEEcCCCce------EEEeeeeccCccccCCCCc--eeEEEECCCCCEEEE-ecCCCC-eEEEEEEcCCC--CEE
Confidence 3445555544454 2222 21122 123788999996655 455431 25566666665 554
Q ss_pred ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEec
Q psy463 399 ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWD 453 (790)
Q Consensus 399 ~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 453 (790)
+.+... ..+++ .-....++++|++++......+.=.+|.+|-++++++.+.
T Consensus 281 ~~~~~~---~teg~-~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~ 331 (346)
T COG2706 281 ELVGIT---PTEGQ-FPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLG 331 (346)
T ss_pred EEEEEe---ccCCc-CCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecc
Confidence 433321 11111 1234789999999988765555666777787778777643
No 158
>KOG0315|consensus
Probab=98.75 E-value=1.1e-05 Score=74.67 Aligned_cols=254 Identities=14% Similarity=0.153 Sum_probs=140.4
Q ss_pred eeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcc
Q psy463 82 RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP 161 (790)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~ 161 (790)
...++.+.+.+|.|..-+.+.... ......+||++.|+-. .++||-++|+.+++ .
T Consensus 19 DhTIRfWqa~tG~C~rTiqh~dsq-----VNrLeiTpdk~~LAaa--------------~~qhvRlyD~~S~n------p 73 (311)
T KOG0315|consen 19 DHTIRFWQALTGICSRTIQHPDSQ-----VNRLEITPDKKDLAAA--------------GNQHVRLYDLNSNN------P 73 (311)
T ss_pred cceeeeeehhcCeEEEEEecCccc-----eeeEEEcCCcchhhhc--------------cCCeeEEEEccCCC------C
Confidence 344566777788888755543211 0123558888877731 26799999998885 2
Q ss_pred eeccccceEEEEEEe--eeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcc
Q psy463 162 VPLTRGRFTVTEILA--WDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWD 239 (790)
Q Consensus 162 ~~lt~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~ 239 (790)
.++...+....|+.+ +..+++ ..|.+. .|+ .-.|| |+..-..++. -
T Consensus 74 ~Pv~t~e~h~kNVtaVgF~~dgr--WMyTgs---eDg------t~kIW--dlR~~~~qR~------~------------- 121 (311)
T KOG0315|consen 74 NPVATFEGHTKNVTAVGFQCDGR--WMYTGS---EDG------TVKIW--DLRSLSCQRN------Y------------- 121 (311)
T ss_pred CceeEEeccCCceEEEEEeecCe--EEEecC---CCc------eEEEE--eccCcccchh------c-------------
Confidence 333333333334433 333332 333322 111 12344 4333222111 1
Q ss_pred cCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc
Q psy463 240 EKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ 319 (790)
Q Consensus 240 ~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~ 319 (790)
....-+..+...|+..-++..++.. .|.+.|+....+....-.+.+ ....+....|||+.++ -+.
T Consensus 122 ----~~~spVn~vvlhpnQteLis~dqsg---~irvWDl~~~~c~~~liPe~~----~~i~sl~v~~dgsml~-a~n--- 186 (311)
T KOG0315|consen 122 ----QHNSPVNTVVLHPNQTELISGDQSG---NIRVWDLGENSCTHELIPEDD----TSIQSLTVMPDGSMLA-AAN--- 186 (311)
T ss_pred ----cCCCCcceEEecCCcceEEeecCCC---cEEEEEccCCccccccCCCCC----cceeeEEEcCCCcEEE-Eec---
Confidence 1223345677778776333433332 289999988766544332221 1245788999999887 333
Q ss_pred ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccC---CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCC
Q psy463 320 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR---GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTA 396 (790)
Q Consensus 320 ~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 396 (790)
..| ..|++++-++.+.+. ..++++ ....+.. -.+|||+|+|+-.+.+ ..+++.+.++ .
T Consensus 187 -nkG--------~cyvW~l~~~~~~s~--l~P~~k~~ah~~~il~-C~lSPd~k~lat~ssd-----ktv~iwn~~~--~ 247 (311)
T KOG0315|consen 187 -NKG--------NCYVWRLLNHQTASE--LEPVHKFQAHNGHILR-CLLSPDVKYLATCSSD-----KTVKIWNTDD--F 247 (311)
T ss_pred -CCc--------cEEEEEccCCCcccc--ceEhhheecccceEEE-EEECCCCcEEEeecCC-----ceEEEEecCC--c
Confidence 456 688888866542221 223332 2322333 5689999999888777 3444444444 2
Q ss_pred -Cc-ceeeecccccCCCcccEEEEEEecCCcEEEEEeec
Q psy463 397 -TP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIG 433 (790)
Q Consensus 397 -~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~ 433 (790)
+. ..|++ ++..+..-.||.||+||+...+.
T Consensus 248 ~kle~~l~g-------h~rWvWdc~FS~dg~YlvTassd 279 (311)
T KOG0315|consen 248 FKLELVLTG-------HQRWVWDCAFSADGEYLVTASSD 279 (311)
T ss_pred eeeEEEeec-------CCceEEeeeeccCccEEEecCCC
Confidence 22 23333 56677788999999999765444
No 159
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.73 E-value=2.5e-07 Score=85.12 Aligned_cols=156 Identities=18% Similarity=0.083 Sum_probs=93.2
Q ss_pred EEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCC
Q psy463 504 LIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDK 583 (790)
Q Consensus 504 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~ 583 (790)
|+++||..++. .+.|...+..++-. . +.|-.++.- -.++...+..|.+....+|
T Consensus 1 v~IvhG~~~s~--~~HW~~wl~~~l~~-~-~~V~~~~~~---------------------~P~~~~W~~~l~~~i~~~~- 54 (171)
T PF06821_consen 1 VLIVHGYGGSP--PDHWQPWLERQLEN-S-VRVEQPDWD---------------------NPDLDEWVQALDQAIDAID- 54 (171)
T ss_dssp EEEE--TTSST--TTSTHHHHHHHHTT-S-EEEEEC--T---------------------S--HHHHHHHHHHCCHC-T-
T ss_pred CEEeCCCCCCC--ccHHHHHHHHhCCC-C-eEEeccccC---------------------CCCHHHHHHHHHHHHhhcC-
Confidence 57899987764 35566544444443 3 666665541 1233445556655333344
Q ss_pred CceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhhhccccchhhhccCCcE
Q psy463 584 TRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQY 663 (790)
Q Consensus 584 ~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 663 (790)
..+.++|||.|+..++.++.......++++++++|...-.. . ..+ ... ..+.
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~--------~-~~~------~~~---------~~f~---- 106 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDP--------E-PFP------PEL---------DGFT---- 106 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCH--------H-CCT------CGG---------CCCT----
T ss_pred CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccc--------c-chh------hhc---------cccc----
Confidence 46999999999999999984445569999999999632100 0 000 000 0000
Q ss_pred EEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhh
Q psy463 664 LLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQ 743 (790)
Q Consensus 664 l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~ 743 (790)
. .....+ ..|.+++.+++|+.||++.
T Consensus 107 --------------------------~---------------------------~p~~~l-~~~~~viaS~nDp~vp~~~ 132 (171)
T PF06821_consen 107 --------------------------P---------------------------LPRDPL-PFPSIVIASDNDPYVPFER 132 (171)
T ss_dssp --------------------------T---------------------------SHCCHH-HCCEEEEEETTBSSS-HHH
T ss_pred --------------------------c---------------------------Cccccc-CCCeEEEEcCCCCccCHHH
Confidence 0 011223 5677999999999999999
Q ss_pred hHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463 744 SMMLAKSLQHADIMFQSQTYPDEEHGLIG 772 (790)
Q Consensus 744 ~~~l~~~l~~~g~~~~~~~~p~~~H~~~~ 772 (790)
+..+++.|.. +++.++++||....
T Consensus 133 a~~~A~~l~a-----~~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 133 AQRLAQRLGA-----ELIILGGGGHFNAA 156 (171)
T ss_dssp HHHHHHHHT------EEEEETS-TTSSGG
T ss_pred HHHHHHHcCC-----CeEECCCCCCcccc
Confidence 9999999853 88999999998765
No 160
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.73 E-value=9.5e-07 Score=97.65 Aligned_cols=78 Identities=14% Similarity=0.194 Sum_probs=46.2
Q ss_pred EEEEEEEccCCcEEEEEeccCcceEEEE---EECCCCceeEEEEEe-CCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 248 VLSRVNWANESVVAAWVNRVQNRARITR---CSINEGTCDVVFSRD-LDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~---~~~~~g~~~~l~~~~-~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
.+..+.|||||+.+++...+ +|++ ....+|+ ..|+... ......+......|..|++ |+ +.. ..+
T Consensus 449 ~Issl~wSpDG~RiA~i~~g----~v~Va~Vvr~~~G~-~~l~~~~~l~~~l~~~~~~l~W~~~~~-L~-V~~----~~~ 517 (591)
T PRK13616 449 PISELQLSRDGVRAAMIIGG----KVYLAVVEQTEDGQ-YALTNPREVGPGLGDTAVSLDWRTGDS-LV-VGR----SDP 517 (591)
T ss_pred CcCeEEECCCCCEEEEEECC----EEEEEEEEeCCCCc-eeecccEEeecccCCccccceEecCCE-EE-EEe----cCC
Confidence 47789999999965555432 3666 5555665 3332110 0011111134689999998 55 333 233
Q ss_pred CCCcCcccEEEEEEcCCCC
Q psy463 324 STPVDSWDHLTFIDLDDQA 342 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~ 342 (790)
...++.+++++..
T Consensus 518 ------~~~v~~v~vDG~~ 530 (591)
T PRK13616 518 ------EHPVWYVNLDGSN 530 (591)
T ss_pred ------CCceEEEecCCcc
Confidence 4579999998765
No 161
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.72 E-value=1.3e-07 Score=94.51 Aligned_cols=122 Identities=24% Similarity=0.222 Sum_probs=84.5
Q ss_pred CcEEEEEEEeCCCCCC-CCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc
Q psy463 480 NMEAQVKLFLPPGIDT-SGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR 558 (790)
Q Consensus 480 g~~i~~~~~~P~~~~~-~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~ 558 (790)
+.++...++.|..... ..-...|+|++.||.+... . .+.|..+.+++.||+|..++..|+..-+.+-.......
T Consensus 49 ~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~---~--~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~ 123 (365)
T COG4188 49 DRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYV---T--GFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGS 123 (365)
T ss_pred CCccccceeccCCCccccccCcCCeEEecCCCCCCc---c--chhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcc
Confidence 5677778888876430 0113789999999977652 2 35677888888999999999999654333222222111
Q ss_pred ----CCccchhHHHHHHHHHHHh------CCCcCCCceEEEEechHHHHHHHHHhcCC
Q psy463 559 ----LGTVEIYDQINVTRYLQEN------LPYIDKTRTAIWGWSYGGYATGLALALDP 606 (790)
Q Consensus 559 ----~~~~~~~D~~~~~~~l~~~------~~~~d~~ri~i~G~S~GG~~a~~~a~~~p 606 (790)
.......|+...+++|.+. .+.+|..+|+++|||+||+.++.++.-+.
T Consensus 124 ~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 124 YAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred cchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccc
Confidence 1124567888888888762 13578899999999999999998876443
No 162
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.71 E-value=7.7e-07 Score=90.05 Aligned_cols=101 Identities=17% Similarity=0.131 Sum_probs=63.9
Q ss_pred ccEEEEEcCCCCccccccccccchHHHHHh--cCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463 501 YPLLIHVYGGPSSFQVTERFSVDWNLYLAD--NKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL 578 (790)
Q Consensus 501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~--~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 578 (790)
.|.++++||.++.. ..|.... ..+.. .. |.++.+|.||++.+. .. ........+.+..+.+.+
T Consensus 21 ~~~i~~~hg~~~~~---~~~~~~~-~~~~~~~~~-~~~~~~d~~g~g~s~-~~---------~~~~~~~~~~~~~~~~~~ 85 (282)
T COG0596 21 GPPLVLLHGFPGSS---SVWRPVF-KVLPALAAR-YRVIAPDLRGHGRSD-PA---------GYSLSAYADDLAALLDAL 85 (282)
T ss_pred CCeEEEeCCCCCch---hhhHHHH-HHhhccccc-eEEEEecccCCCCCC-cc---------cccHHHHHHHHHHHHHHh
Confidence 34899999998763 2222211 11111 12 899999999877654 00 011112233344444433
Q ss_pred CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463 579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT 620 (790)
Q Consensus 579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~ 620 (790)
+ ..++.++|||+||.++..++.++|. .++.++..++..
T Consensus 86 ~---~~~~~l~G~S~Gg~~~~~~~~~~p~-~~~~~v~~~~~~ 123 (282)
T COG0596 86 G---LEKVVLVGHSMGGAVALALALRHPD-RVRGLVLIGPAP 123 (282)
T ss_pred C---CCceEEEEecccHHHHHHHHHhcch-hhheeeEecCCC
Confidence 3 2459999999999999999999986 788877777654
No 163
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.71 E-value=3.4e-07 Score=97.90 Aligned_cols=89 Identities=13% Similarity=0.081 Sum_probs=60.1
Q ss_pred hHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHH---
Q psy463 524 WNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGL--- 600 (790)
Q Consensus 524 ~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~--- 600 (790)
+..++++ +|+.|+.+|.+..+.....+.-. .+ +..+.++++.+.+. ....+|.++|+|+||.+++.
T Consensus 239 lVr~lv~-qG~~VflIsW~nP~~~~r~~~ld------DY-v~~i~~Ald~V~~~---tG~~~vnl~GyC~GGtl~a~~~a 307 (560)
T TIGR01839 239 FVQYCLK-NQLQVFIISWRNPDKAHREWGLS------TY-VDALKEAVDAVRAI---TGSRDLNLLGACAGGLTCAALVG 307 (560)
T ss_pred HHHHHHH-cCCeEEEEeCCCCChhhcCCCHH------HH-HHHHHHHHHHHHHh---cCCCCeeEEEECcchHHHHHHHH
Confidence 4555555 99999999998744322211111 11 23556677777663 33578999999999999986
Q ss_pred -HHhcCCCCceEEEEEeCCCCCcc
Q psy463 601 -ALALDPSNVFKCGISVAPVTDWI 623 (790)
Q Consensus 601 -~a~~~p~~~~~~~v~~~~~~~~~ 623 (790)
+++++++.+++.++......|+.
T Consensus 308 ~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 308 HLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred HHHhcCCCCceeeEEeeecccccC
Confidence 67777655788888777776654
No 164
>KOG2112|consensus
Probab=98.69 E-value=5.5e-07 Score=82.14 Aligned_cols=60 Identities=23% Similarity=0.297 Sum_probs=53.1
Q ss_pred CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHH
Q psy463 725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDS 787 (790)
Q Consensus 725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~ 787 (790)
.+|+++.||+.|+.||..-.+...+.|+..+.++++.-|++.+|.... +-+..+..|+.+
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~---~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSP---QELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccH---HHHHHHHHHHHH
Confidence 479999999999999999999999999999999999999999998864 455677777765
No 165
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.69 E-value=4.2e-07 Score=90.52 Aligned_cols=271 Identities=17% Similarity=0.133 Sum_probs=138.1
Q ss_pred CCccEEEEEcCCCCcccccccccc---chHHHHH------hcCCeEEEEEcCCCCC-CChhhhHh-hh---h-ccCCccc
Q psy463 499 KKYPLLIHVYGGPSSFQVTERFSV---DWNLYLA------DNKDIVVAYIDGRNSA-LKGNTLKY-AG---Y-RRLGTVE 563 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~~~~~~~---~~~~~~~------~~~G~~v~~~d~rG~~-~~g~~~~~-~~---~-~~~~~~~ 563 (790)
.+-.+|+++|+..++..+...... .|...++ .-..|.|+++|..|++ ++..+... .. + ..+....
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 345689999998875443332111 2444332 2246889999999877 33222111 11 1 1223356
Q ss_pred hhHHHHHHHHHHHhCCCcCCCceE-EEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccc----hhhhcCCCC
Q psy463 564 IYDQINVTRYLQENLPYIDKTRTA-IWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIY----SERYMGLPT 638 (790)
Q Consensus 564 ~~D~~~~~~~l~~~~~~~d~~ri~-i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~----~~~~~g~~~ 638 (790)
+.|.+.+-+.++++++ | ++++ |+|.||||+.++..+..+|+ .+..++.++.-.....+.-.| .+.+..-|
T Consensus 129 i~D~V~aq~~ll~~LG-I--~~l~avvGgSmGGMqaleWa~~yPd-~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP- 203 (368)
T COG2021 129 IRDMVRAQRLLLDALG-I--KKLAAVVGGSMGGMQALEWAIRYPD-RVRRAIPIATAARLSAQNIAFNEVQRQAIEADP- 203 (368)
T ss_pred HHHHHHHHHHHHHhcC-c--ceEeeeeccChHHHHHHHHHHhChH-HHhhhheecccccCCHHHHHHHHHHHHHHHhCC-
Confidence 7888888888888666 3 5555 99999999999999999997 554444444322221111111 11111111
Q ss_pred ccCchhhh-h------------------hccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcc----hhc
Q psy463 639 FEDNLEGY-K------------------IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIM----FQS 695 (790)
Q Consensus 639 ~~~~~~~~-~------------------~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~----~~~ 695 (790)
..+...| . -.+.....+++.+ ... .+....-..-.+.-..|..++-. |..
T Consensus 204 -~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r-~~~-----~~~~~~~~~~f~vESYL~~qg~kf~~rfDa 276 (368)
T COG2021 204 -DWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGR-RLQ-----ADPLRGGGVRFAVESYLDYQGDKFVARFDA 276 (368)
T ss_pred -CccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcc-ccc-----ccccCCCchhHHHHHHHHHHHHHHHhccCc
Confidence 0000001 0 0111111111110 000 01000000001111111111110 000
Q ss_pred ccccCC---CCcCCcchhhhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEc-CCCCCcCC
Q psy463 696 QRYMGL---PTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTY-PDEEHGLI 771 (790)
Q Consensus 696 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~-p~~~H~~~ 771 (790)
..|... ....+.... ..++...++++ ++|+|++.=+.|...|+++..++.+.|+..+. +.++ ...||.-+
T Consensus 277 NsYL~lt~ald~~D~s~~--~~~l~~al~~i-~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~---~~~i~S~~GHDaF 350 (368)
T COG2021 277 NSYLYLTRALDYHDVSRG--RGDLTAALARI-KAPVLVVGITSDWLFPPELQRALAEALPAAGA---LREIDSPYGHDAF 350 (368)
T ss_pred chHHHHHHHHHhcCCCCC--cCcHHHHHhcC-ccCEEEEEecccccCCHHHHHHHHHhccccCc---eEEecCCCCchhh
Confidence 000000 000000000 12334557889 89999999999999999999999999998865 4344 45688665
Q ss_pred C-cchHHHHHHHHHHHH
Q psy463 772 G-VRPHFYHTLERFLDS 787 (790)
Q Consensus 772 ~-~~~~~~~~i~~fl~~ 787 (790)
. ..+.+...|..||+.
T Consensus 351 L~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 351 LVESEAVGPLIRKFLAL 367 (368)
T ss_pred hcchhhhhHHHHHHhhc
Confidence 5 666777888888864
No 166
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.68 E-value=7.8e-07 Score=98.30 Aligned_cols=118 Identities=15% Similarity=0.286 Sum_probs=71.4
Q ss_pred EEEEEEccCCcEEEEEecc---------CcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc
Q psy463 249 LSRVNWANESVVAAWVNRV---------QNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ 319 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~---------~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~ 319 (790)
+..|+|||||+.+.+..++ ....+++++++++++.++ ... .....++|||||++|+|+..
T Consensus 399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~~------g~Issl~wSpDG~RiA~i~~--- 467 (591)
T PRK13616 399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--RVP------GPISELQLSRDGVRAAMIIG--- 467 (591)
T ss_pred CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh--ccC------CCcCeEEECCCCCEEEEEEC---
Confidence 6789999998844444322 233467777777776654 111 12568999999999997653
Q ss_pred ccCCCCCcCcccEEEE---EEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463 320 ESDGSTPVDSWDHLTF---IDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 320 ~~~g~~~~~~~~~l~~---~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
| +|++ ...++|+ .....++.|+.+.......+.|..++. |+....... ..+|.+++++
T Consensus 468 ---g--------~v~Va~Vvr~~~G~-~~l~~~~~l~~~l~~~~~~l~W~~~~~-L~V~~~~~~---~~v~~v~vDG 528 (591)
T PRK13616 468 ---G--------KVYLAVVEQTEDGQ-YALTNPREVGPGLGDTAVSLDWRTGDS-LVVGRSDPE---HPVWYVNLDG 528 (591)
T ss_pred ---C--------EEEEEEEEeCCCCc-eeecccEEeecccCCccccceEecCCE-EEEEecCCC---CceEEEecCC
Confidence 4 5666 4434453 000112335544333212378999887 655544433 6799999987
No 167
>KOG0291|consensus
Probab=98.67 E-value=8.1e-05 Score=79.59 Aligned_cols=146 Identities=16% Similarity=0.182 Sum_probs=96.3
Q ss_pred CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463 247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP 326 (790)
Q Consensus 247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~ 326 (790)
..+..++.||||++++.-..+. .+.+++..+|-|..-+.+.... .....|+.+|+.++ ..+ -+|
T Consensus 351 ~~i~~l~YSpDgq~iaTG~eDg---KVKvWn~~SgfC~vTFteHts~-----Vt~v~f~~~g~~ll-ssS----LDG--- 414 (893)
T KOG0291|consen 351 DRITSLAYSPDGQLIATGAEDG---KVKVWNTQSGFCFVTFTEHTSG-----VTAVQFTARGNVLL-SSS----LDG--- 414 (893)
T ss_pred cceeeEEECCCCcEEEeccCCC---cEEEEeccCceEEEEeccCCCc-----eEEEEEEecCCEEE-Eee----cCC---
Confidence 4467899999999555433222 2888999999898766654321 55789999999776 665 577
Q ss_pred cCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccc
Q psy463 327 VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLL 406 (790)
Q Consensus 327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~ 406 (790)
.+-.+|+.... ..+.+|...-..-.-++.+|.|. |++.+.... ..|++.+..+ |+...+-.
T Consensus 415 -----tVRAwDlkRYr-----NfRTft~P~p~QfscvavD~sGe-lV~AG~~d~---F~IfvWS~qT--GqllDiLs--- 475 (893)
T KOG0291|consen 415 -----TVRAWDLKRYR-----NFRTFTSPEPIQFSCVAVDPSGE-LVCAGAQDS---FEIFVWSVQT--GQLLDILS--- 475 (893)
T ss_pred -----eEEeeeecccc-----eeeeecCCCceeeeEEEEcCCCC-EEEeeccce---EEEEEEEeec--Ceeeehhc---
Confidence 46667775433 14445543221222367788787 666665544 7888888877 55433322
Q ss_pred ccCCCcccEEEEEEecCCcEEEEE
Q psy463 407 TSANQKCSYSGATFSTNVSYYVLS 430 (790)
Q Consensus 407 ~~~~~~~~~~~~~~s~dg~~~~~~ 430 (790)
++.+.++..+|+|+|..++-.
T Consensus 476 ---GHEgPVs~l~f~~~~~~LaS~ 496 (893)
T KOG0291|consen 476 ---GHEGPVSGLSFSPDGSLLASG 496 (893)
T ss_pred ---CCCCcceeeEEccccCeEEec
Confidence 377888999999999977543
No 168
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.67 E-value=3.2e-05 Score=79.17 Aligned_cols=124 Identities=13% Similarity=0.192 Sum_probs=71.7
Q ss_pred ceeEcc-CCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCC----CeEEe--EEEeeecCCCEEE
Q psy463 301 HLRFSS-DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG----RFTVT--EILAWDEKENNVY 373 (790)
Q Consensus 301 ~~~~sp-Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~----~~~~~--~~~~~s~dg~~l~ 373 (790)
.|.+++ ||+.++ ... + | .|+++|+.+.+.........++.+ .|... ...++++||+++|
T Consensus 198 rP~~~~~dg~~~~-vs~---e--G--------~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~ly 263 (352)
T TIGR02658 198 HPAYSNKSGRLVW-PTY---T--G--------KIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIY 263 (352)
T ss_pred CCceEcCCCcEEE-Eec---C--C--------eEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEE
Confidence 556777 887665 454 2 6 799999765431000001112211 11111 1278899999999
Q ss_pred EEEcCCC-----CceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463 374 FLSTQGS-----PIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ 447 (790)
Q Consensus 374 ~~~~~~~-----~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~ 447 (790)
+....+. ....+|++++..+ ++. ..+.- + .....+.+|||++.++|..++. ...|.++|..++
T Consensus 264 V~~~~~~~~thk~~~~~V~ViD~~t--~kvi~~i~v-------G-~~~~~iavS~Dgkp~lyvtn~~-s~~VsViD~~t~ 332 (352)
T TIGR02658 264 LLADQRAKWTHKTASRFLFVVDAKT--GKRLRKIEL-------G-HEIDSINVSQDAKPLLYALSTG-DKTLYIFDAETG 332 (352)
T ss_pred EEecCCccccccCCCCEEEEEECCC--CeEEEEEeC-------C-CceeeEEECCCCCeEEEEeCCC-CCcEEEEECcCC
Confidence 9653311 1225899999877 433 22221 2 2566789999999555654443 345889998775
Q ss_pred eE
Q psy463 448 RL 449 (790)
Q Consensus 448 ~~ 449 (790)
+.
T Consensus 333 k~ 334 (352)
T TIGR02658 333 KE 334 (352)
T ss_pred eE
Confidence 43
No 169
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.66 E-value=2.4e-06 Score=79.13 Aligned_cols=234 Identities=13% Similarity=0.112 Sum_probs=117.4
Q ss_pred EEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC-Chhhh
Q psy463 473 MSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL-KGNTL 551 (790)
Q Consensus 473 ~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~-~g~~~ 551 (790)
..+...+|.+|..|...|++-. ..+.|+|++.-|++.. .+.|. ..+ ++++..||.|+.+|.-.+-| +....
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~---~~~~~tiliA~Gf~rr---mdh~a-gLA-~YL~~NGFhViRyDsl~HvGlSsG~I 76 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNE---PKRNNTILIAPGFARR---MDHFA-GLA-EYLSANGFHVIRYDSLNHVGLSSGDI 76 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS------S-EEEEE-TT-GG---GGGGH-HHH-HHHHTTT--EEEE---B---------
T ss_pred ceeEcCCCCEEEEeccCCCCCC---cccCCeEEEecchhHH---HHHHH-HHH-HHHhhCCeEEEeccccccccCCCCCh
Confidence 3456668999999999998643 4556888888887654 22222 233 44455999999999764322 21111
Q ss_pred HhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccc-cccch
Q psy463 552 KYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYY-DTIYS 630 (790)
Q Consensus 552 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~-~~~~~ 630 (790)
.+- .......++..+++|+.. .+ ..+++++..|..|-+|...+.+ . ....+|...|+.++..- ...+.
T Consensus 77 ~ef----tms~g~~sL~~V~dwl~~-~g---~~~~GLIAaSLSaRIAy~Va~~-i--~lsfLitaVGVVnlr~TLe~al~ 145 (294)
T PF02273_consen 77 NEF----TMSIGKASLLTVIDWLAT-RG---IRRIGLIAASLSARIAYEVAAD-I--NLSFLITAVGVVNLRDTLEKALG 145 (294)
T ss_dssp --------HHHHHHHHHHHHHHHHH-TT------EEEEEETTHHHHHHHHTTT-S----SEEEEES--S-HHHHHHHHHS
T ss_pred hhc----chHHhHHHHHHHHHHHHh-cC---CCcchhhhhhhhHHHHHHHhhc-c--CcceEEEEeeeeeHHHHHHHHhc
Confidence 100 001235778889999987 56 4679999999999999999983 3 35566666688887531 11122
Q ss_pred hhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchh
Q psy463 631 ERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEG 710 (790)
Q Consensus 631 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 710 (790)
.-|++.+ .+.+... +-+.| +--.+..++....+.+-.
T Consensus 146 ~Dyl~~~-----------------i~~lp~d--ldfeG------h~l~~~vFv~dc~e~~w~------------------ 182 (294)
T PF02273_consen 146 YDYLQLP-----------------IEQLPED--LDFEG------HNLGAEVFVTDCFEHGWD------------------ 182 (294)
T ss_dssp S-GGGS------------------GGG--SE--EEETT------EEEEHHHHHHHHHHTT-S------------------
T ss_pred cchhhcc-----------------hhhCCCc--ccccc------cccchHHHHHHHHHcCCc------------------
Confidence 2222222 1111100 00101 011122233222222211
Q ss_pred hhhhhhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463 711 YKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG 772 (790)
Q Consensus 711 ~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~ 772 (790)
.-.+..+.++++ .+|++.+++.+|.-|...+..++...+... .+++..++|+.|....
T Consensus 183 -~l~ST~~~~k~l-~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~--~~klysl~Gs~HdL~e 240 (294)
T PF02273_consen 183 -DLDSTINDMKRL-SIPFIAFTANDDDWVKQSEVEELLDNINSN--KCKLYSLPGSSHDLGE 240 (294)
T ss_dssp -SHHHHHHHHTT---S-EEEEEETT-TTS-HHHHHHHHTT-TT----EEEEEETT-SS-TTS
T ss_pred -cchhHHHHHhhC-CCCEEEEEeCCCccccHHHHHHHHHhcCCC--ceeEEEecCccchhhh
Confidence 122344778889 999999999999999988888887776654 4689999999998875
No 170
>KOG0293|consensus
Probab=98.65 E-value=1.8e-06 Score=85.17 Aligned_cols=284 Identities=13% Similarity=0.147 Sum_probs=149.1
Q ss_pred ceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEeeC
Q psy463 11 SALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSI 90 (790)
Q Consensus 11 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~ 90 (790)
+-.-|||+||+||-++. +...-+|.+..++.- .....+..+...+.-+.|+||.+.+.-- .....+.++++
T Consensus 228 Wfl~FS~nGkyLAsaSk-D~Taiiw~v~~d~~~-----kl~~tlvgh~~~V~yi~wSPDdryLlaC---g~~e~~~lwDv 298 (519)
T KOG0293|consen 228 WFLQFSHNGKYLASASK-DSTAIIWIVVYDVHF-----KLKKTLVGHSQPVSYIMWSPDDRYLLAC---GFDEVLSLWDV 298 (519)
T ss_pred EEEEEcCCCeeEeeccC-CceEEEEEEecCcce-----eeeeeeecccCceEEEEECCCCCeEEec---CchHheeeccC
Confidence 45569999999998775 444556666654431 0111111122223335688777654221 12334778899
Q ss_pred CCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceE
Q psy463 91 NEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT 170 (790)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~ 170 (790)
.+|.+++.+.... +- ....=+|-|||.+++--+ .-++++..++++.... .++=... +
T Consensus 299 ~tgd~~~~y~~~~--~~--S~~sc~W~pDg~~~V~Gs-------------~dr~i~~wdlDgn~~~----~W~gvr~--~ 355 (519)
T KOG0293|consen 299 DTGDLRHLYPSGL--GF--SVSSCAWCPDGFRFVTGS-------------PDRTIIMWDLDGNILG----NWEGVRD--P 355 (519)
T ss_pred CcchhhhhcccCc--CC--CcceeEEccCCceeEecC-------------CCCcEEEecCCcchhh----ccccccc--c
Confidence 8998887766431 00 012347889999866422 2348999999876311 1111000 0
Q ss_pred EEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEE
Q psy463 171 VTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLS 250 (790)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~ 250 (790)
-..-++..++++. ++.+. ...+|..++.++... +.+. ..+..++
T Consensus 356 ~v~dlait~Dgk~-vl~v~------------~d~~i~l~~~e~~~d------r~li-----------------se~~~it 399 (519)
T KOG0293|consen 356 KVHDLAITYDGKY-VLLVT------------VDKKIRLYNREARVD------RGLI-----------------SEEQPIT 399 (519)
T ss_pred eeEEEEEcCCCcE-EEEEe------------cccceeeechhhhhh------hccc-----------------cccCcee
Confidence 0111233334432 22211 225777777776442 2222 3456678
Q ss_pred EEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463 251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW 330 (790)
Q Consensus 251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~ 330 (790)
+.+.|.||+++...-..+ .+.+.|++.....+-+..-....++ . .-.|.--...++...+ .++
T Consensus 400 s~~iS~d~k~~LvnL~~q---ei~LWDl~e~~lv~kY~Ghkq~~fi--I-rSCFgg~~~~fiaSGS----ED~------- 462 (519)
T KOG0293|consen 400 SFSISKDGKLALVNLQDQ---EIHLWDLEENKLVRKYFGHKQGHFI--I-RSCFGGGNDKFIASGS----EDS------- 462 (519)
T ss_pred EEEEcCCCcEEEEEcccC---eeEEeecchhhHHHHhhcccccceE--E-EeccCCCCcceEEecC----CCc-------
Confidence 999999999554443332 2888888743321111100000000 0 0112111112332444 344
Q ss_pred cEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEE
Q psy463 331 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYR 388 (790)
Q Consensus 331 ~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 388 (790)
++|+++..+|+ ....|+.+...+.- ++|+|.....+..+.+.+ ..+||.
T Consensus 463 -kvyIWhr~sgk-----ll~~LsGHs~~vNc-VswNP~~p~m~ASasDDg--tIRIWg 511 (519)
T KOG0293|consen 463 -KVYIWHRISGK-----LLAVLSGHSKTVNC-VSWNPADPEMFASASDDG--TIRIWG 511 (519)
T ss_pred -eEEEEEccCCc-----eeEeecCCcceeeE-EecCCCCHHHhhccCCCC--eEEEec
Confidence 79999988887 35567766655554 899999887666555521 256664
No 171
>KOG0291|consensus
Probab=98.63 E-value=2.2e-05 Score=83.78 Aligned_cols=240 Identities=15% Similarity=0.180 Sum_probs=139.7
Q ss_pred ceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEeeC
Q psy463 11 SALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSI 90 (790)
Q Consensus 11 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~ 90 (790)
..+.|+--|.||||-+..-|..-+|.+... .+..-...++.....+..++|+..+. .+...-.+.+|+.
T Consensus 311 ~t~~~N~tGDWiA~g~~klgQLlVweWqsE--------sYVlKQQgH~~~i~~l~YSpDgq~ia---TG~eDgKVKvWn~ 379 (893)
T KOG0291|consen 311 LTVSFNSTGDWIAFGCSKLGQLLVWEWQSE--------SYVLKQQGHSDRITSLAYSPDGQLIA---TGAEDGKVKVWNT 379 (893)
T ss_pred eEEEecccCCEEEEcCCccceEEEEEeecc--------ceeeeccccccceeeEEECCCCcEEE---eccCCCcEEEEec
Confidence 457799999999998876565555555442 22222333455555566666665432 2233446778888
Q ss_pred CCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceE
Q psy463 91 NEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT 170 (790)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~ 170 (790)
.+|-|..-++++..+- ....|+..|+.++ +++.++ .+-.+|+.... ..+-.|...--
T Consensus 380 ~SgfC~vTFteHts~V-----t~v~f~~~g~~ll-ssSLDG------------tVRAwDlkRYr-----NfRTft~P~p~ 436 (893)
T KOG0291|consen 380 QSGFCFVTFTEHTSGV-----TAVQFTARGNVLL-SSSLDG------------TVRAWDLKRYR-----NFRTFTSPEPI 436 (893)
T ss_pred cCceEEEEeccCCCce-----EEEEEEecCCEEE-EeecCC------------eEEeeeecccc-----eeeeecCCCce
Confidence 8888988877655431 1247888887544 555544 23333433221 12222222111
Q ss_pred EEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEE
Q psy463 171 VTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLS 250 (790)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~ 250 (790)
-..-++.|+.+. +++...- ....|++.++++|+-. ..|. +.++-+.
T Consensus 437 QfscvavD~sGe--lV~AG~~----------d~F~IfvWS~qTGqll-----DiLs-----------------GHEgPVs 482 (893)
T KOG0291|consen 437 QFSCVAVDPSGE--LVCAGAQ----------DSFEIFVWSVQTGQLL-----DILS-----------------GHEGPVS 482 (893)
T ss_pred eeeEEEEcCCCC--EEEeecc----------ceEEEEEEEeecCeee-----ehhc-----------------CCCCcce
Confidence 222246676655 6766542 1268999999999742 2233 6677788
Q ss_pred EEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463 251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW 330 (790)
Q Consensus 251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~ 330 (790)
.++++|+|..++..+.+.+ -++|-+=-..++...+--... .-...|+|||+.|++... +|
T Consensus 483 ~l~f~~~~~~LaS~SWDkT-VRiW~if~s~~~vEtl~i~sd-------vl~vsfrPdG~elaVaTl-----dg------- 542 (893)
T KOG0291|consen 483 GLSFSPDGSLLASGSWDKT-VRIWDIFSSSGTVETLEIRSD-------VLAVSFRPDGKELAVATL-----DG------- 542 (893)
T ss_pred eeEEccccCeEEeccccce-EEEEEeeccCceeeeEeeccc-------eeEEEEcCCCCeEEEEEe-----cc-------
Confidence 9999999997766655433 224443333344444322210 347899999999995443 55
Q ss_pred cEEEEEEcC
Q psy463 331 DHLTFIDLD 339 (790)
Q Consensus 331 ~~l~~~d~~ 339 (790)
+|-.+|..
T Consensus 543 -qItf~d~~ 550 (893)
T KOG0291|consen 543 -QITFFDIK 550 (893)
T ss_pred -eEEEEEhh
Confidence 56666654
No 172
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.63 E-value=1.8e-06 Score=81.90 Aligned_cols=106 Identities=18% Similarity=0.312 Sum_probs=61.9
Q ss_pred CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
.+.+..++|||+|+.++......+ ..+.+++++ ...+..-... ......|||+|+.|++ ++.+ +..|
T Consensus 59 ~~~I~~~~WsP~g~~favi~g~~~-~~v~lyd~~---~~~i~~~~~~-----~~n~i~wsP~G~~l~~-~g~~-n~~G-- 125 (194)
T PF08662_consen 59 EGPIHDVAWSPNGNEFAVIYGSMP-AKVTLYDVK---GKKIFSFGTQ-----PRNTISWSPDGRFLVL-AGFG-NLNG-- 125 (194)
T ss_pred CCceEEEEECcCCCEEEEEEccCC-cccEEEcCc---ccEeEeecCC-----CceEEEECCCCCEEEE-EEcc-CCCc--
Confidence 345889999999994333322111 147777765 2222222211 1346899999998884 4311 1223
Q ss_pred CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
.|.++|....+ ........ .. ....|||||++++..+..
T Consensus 126 ------~l~~wd~~~~~------~i~~~~~~-~~-t~~~WsPdGr~~~ta~t~ 164 (194)
T PF08662_consen 126 ------DLEFWDVRKKK------KISTFEHS-DA-TDVEWSPDGRYLATATTS 164 (194)
T ss_pred ------EEEEEECCCCE------EeeccccC-cE-EEEEEcCCCCEEEEEEec
Confidence 68899987554 22111112 22 348999999988876654
No 173
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.62 E-value=8.2e-08 Score=106.77 Aligned_cols=130 Identities=22% Similarity=0.236 Sum_probs=87.3
Q ss_pred EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCC-eEEEEEcCC-CCCCChhhhHhhhhccCC
Q psy463 483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKD-IVVAYIDGR-NSALKGNTLKYAGYRRLG 560 (790)
Q Consensus 483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G-~~v~~~d~r-G~~~~g~~~~~~~~~~~~ 560 (790)
+...++.|.... ..+++|+||++|||+........+ ....+++..+ ++|+.++|| |.-++...... ...+
T Consensus 79 l~l~i~~p~~~~--~~~~~pv~v~ihGG~~~~g~~~~~---~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~~~ 150 (493)
T cd00312 79 LYLNVYTPKNTK--PGNSLPVMVWIHGGGFMFGSGSLY---PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---ELPG 150 (493)
T ss_pred CeEEEEeCCCCC--CCCCCCEEEEEcCCccccCCCCCC---ChHHHHhcCCCEEEEEecccccccccccCCCC---CCCc
Confidence 555677787543 356789999999998764322221 2334444344 999999999 65443322111 1122
Q ss_pred ccchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCCCC
Q psy463 561 TVEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPVTD 621 (790)
Q Consensus 561 ~~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~~~ 621 (790)
...+.|+..+++|+.++ ++ .|+++|.|+|+|.||.++..++.... ...|+.+|+.+|...
T Consensus 151 n~g~~D~~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 151 NYGLKDQRLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred chhHHHHHHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 33478999999998764 34 79999999999999999988877521 236888887776543
No 174
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.62 E-value=1.6e-05 Score=83.62 Aligned_cols=277 Identities=15% Similarity=0.097 Sum_probs=132.4
Q ss_pred cCCceeEeCCCCCceEEEEec---CCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeE
Q psy463 8 SSSSALWFSPSGNNLAYASFD---DNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRAR 84 (790)
Q Consensus 8 ~~~~~~~wSPDG~~iaf~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~ 84 (790)
.+.+.+++|||+++|--+... .+.+..|.+....+....+. .....-.....+.-+++++.++-.+...+...
T Consensus 37 ~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~----~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~ 112 (345)
T PF10282_consen 37 ENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLN----SVPSGGSSPCHIAVDPDGRFLYVANYGGGSVS 112 (345)
T ss_dssp SSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEE----EEEESSSCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEee----eeccCCCCcEEEEEecCCCEEEEEEccCCeEE
Confidence 445678899999866555442 34556666665533200000 00000000111223345555555555443333
Q ss_pred EEEeeCCCCeeeEE---EeecC-----CCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCc
Q psy463 85 ITRCSINEGTCDVV---FSRDL-----DRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGI 156 (790)
Q Consensus 85 ~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~ 156 (790)
+...+.. |..... ..... .+......-...++|||+.++...-.. ..|++++++.....
T Consensus 113 v~~l~~~-g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~------------D~v~~~~~~~~~~~ 179 (345)
T PF10282_consen 113 VFPLDDD-GSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGA------------DRVYVYDIDDDTGK 179 (345)
T ss_dssp EEEECTT-SEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTT------------TEEEEEEE-TTS-T
T ss_pred EEEccCC-cccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCC------------CEEEEEEEeCCCce
Confidence 3222222 433322 11110 000000111248899999887554322 27999988765310
Q ss_pred cCC-cceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecC--CcccccCcCCcccccccccee
Q psy463 157 KDK-VPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLD--DQAGIKDKVPVPLTRGRFTVT 233 (790)
Q Consensus 157 ~~~-~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~lt~~~~~~~ 233 (790)
-.. ....+..|.. -.-+.++++++ .+|+... ....|.++++. ++..+.++
T Consensus 180 l~~~~~~~~~~G~G--PRh~~f~pdg~--~~Yv~~e----------~s~~v~v~~~~~~~g~~~~~~------------- 232 (345)
T PF10282_consen 180 LTPVDSIKVPPGSG--PRHLAFSPDGK--YAYVVNE----------LSNTVSVFDYDPSDGSLTEIQ------------- 232 (345)
T ss_dssp EEEEEEEECSTTSS--EEEEEE-TTSS--EEEEEET----------TTTEEEEEEEETTTTEEEEEE-------------
T ss_pred EEEeeccccccCCC--CcEEEEcCCcC--EEEEecC----------CCCcEEEEeecccCCceeEEE-------------
Confidence 000 0112222211 12235566555 5665542 12577777766 33211110
Q ss_pred ehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEE
Q psy463 234 EILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLL 313 (790)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~ 313 (790)
...-.+........-..+..||||++++.++|+.+.-.+|.++.++|..+.+-.......+ ...+.++|||++|+.
T Consensus 233 -~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~---Pr~~~~s~~g~~l~V 308 (345)
T PF10282_consen 233 -TISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKF---PRHFAFSPDGRYLYV 308 (345)
T ss_dssp -EEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSS---EEEEEE-TTSSEEEE
T ss_pred -EeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCC---ccEEEEeCCCCEEEE
Confidence 0111111112223567899999999999999998776677777777887766544321211 247889999999884
Q ss_pred EEccccccCCCCCcCcccEEEEEEcCCCC
Q psy463 314 ILSHNQESDGSTPVDSWDHLTFIDLDDQA 342 (790)
Q Consensus 314 ~~~~~~~~~g~~~~~~~~~l~~~d~~~~~ 342 (790)
+. ..++ .-.+|.+|.++|.
T Consensus 309 -a~---~~s~------~v~vf~~d~~tG~ 327 (345)
T PF10282_consen 309 -AN---QDSN------TVSVFDIDPDTGK 327 (345)
T ss_dssp -EE---TTTT------EEEEEEEETTTTE
T ss_pred -Ee---cCCC------eEEEEEEeCCCCc
Confidence 44 2344 3455566666665
No 175
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.62 E-value=4.6e-05 Score=80.00 Aligned_cols=253 Identities=12% Similarity=0.115 Sum_probs=119.6
Q ss_pred cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccce-------EEEEEEeeeccCCccEE
Q psy463 114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF-------TVTEILAWDERENNPLL 186 (790)
Q Consensus 114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~-------~~~~~~~~~~~~~~~~~ 186 (790)
-++|+||++++-.....+ ++.++|..+.+ ....+..+.. .+..+.. ...+. .+
T Consensus 83 i~~s~DG~~~~v~n~~~~------------~v~v~D~~tle-----~v~~I~~~~~~~~~~~~Rv~aIv~--s~~~~-~f 142 (369)
T PF02239_consen 83 IAVSPDGKYVYVANYEPG------------TVSVIDAETLE-----PVKTIPTGGMPVDGPESRVAAIVA--SPGRP-EF 142 (369)
T ss_dssp EEE--TTTEEEEEEEETT------------EEEEEETTT-------EEEEEE--EE-TTTS---EEEEEE---SSSS-EE
T ss_pred EEEcCCCCEEEEEecCCC------------ceeEecccccc-----ceeecccccccccccCCCceeEEe--cCCCC-EE
Confidence 377999999877665444 89999987763 2333332211 1122222 11111 22
Q ss_pred EEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEec
Q psy463 187 ILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNR 266 (790)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r 266 (790)
++... ...+||++|....+. ...+. ...........|+||||++.....
T Consensus 143 Vv~lk----------d~~~I~vVdy~d~~~------~~~~~---------------i~~g~~~~D~~~dpdgry~~va~~ 191 (369)
T PF02239_consen 143 VVNLK----------DTGEIWVVDYSDPKN------LKVTT---------------IKVGRFPHDGGFDPDGRYFLVAAN 191 (369)
T ss_dssp EEEET----------TTTEEEEEETTTSSC------EEEEE---------------EE--TTEEEEEE-TTSSEEEEEEG
T ss_pred EEEEc----------cCCeEEEEEeccccc------cceee---------------ecccccccccccCcccceeeeccc
Confidence 22221 226999999776431 11110 023344567899999995544433
Q ss_pred cCcceEEEEEECCCCceeEEEEEeCC------CcccccCCceeEccCCCEEEE--EEccccccCCCCCcCcccEEEEEEc
Q psy463 267 VQNRARITRCSINEGTCDVVFSRDLD------RGWFEPFDHLRFSSDGKKMLL--ILSHNQESDGSTPVDSWDHLTFIDL 338 (790)
Q Consensus 267 ~~~~~~i~~~~~~~g~~~~l~~~~~~------~~~~~~~~~~~~spDg~~i~~--~~~~~~~~~g~~~~~~~~~l~~~d~ 338 (790)
..+ .+.++|.++++...+...... .+|.++...+.|+..+..... .... +.-......++..+-.+++
T Consensus 192 ~sn--~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~--~~v~v~d~~~wkvv~~I~~ 267 (369)
T PF02239_consen 192 GSN--KIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGT--DPVSVHDDYAWKVVKTIPT 267 (369)
T ss_dssp GGT--EEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE----TTT-STTTBTSEEEEEE-
T ss_pred ccc--eeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccC--CccccchhhcCeEEEEEEC
Confidence 333 589999988877655443111 113334445666554432111 1110 0000000001223333332
Q ss_pred CCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC-cceeeecccccCCCcccEEE
Q psy463 339 DDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT-PECITCDLLTSANQKCSYSG 417 (790)
Q Consensus 339 ~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~ 417 (790)
.++ . .++..+||++++++....+ +....|.+++..+ -+ ..++... .......
T Consensus 268 ~G~----------------g--lFi~thP~s~~vwvd~~~~-~~~~~v~viD~~t--l~~~~~i~~~------~~~~~~h 320 (369)
T PF02239_consen 268 QGG----------------G--LFIKTHPDSRYVWVDTFLN-PDADTVQVIDKKT--LKVVKTITPG------PGKRVVH 320 (369)
T ss_dssp SSS----------------S----EE--TT-SEEEEE-TT--SSHT-EEEEECCG--TEEEE-HHHH------HT--EEE
T ss_pred CCC----------------c--ceeecCCCCccEEeeccCC-CCCceEEEEECcC--cceeEEEecc------CCCcEec
Confidence 211 1 1256789999998874332 2246888898866 22 2223221 1123677
Q ss_pred EEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463 418 ATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL 449 (790)
Q Consensus 418 ~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~ 449 (790)
+.|++||+.++++.-..+ ..|.++|..+.++
T Consensus 321 ~ef~~dG~~v~vS~~~~~-~~i~v~D~~Tl~~ 351 (369)
T PF02239_consen 321 MEFNPDGKEVWVSVWDGN-GAIVVYDAKTLKE 351 (369)
T ss_dssp EEE-TTSSEEEEEEE--T-TEEEEEETTTTEE
T ss_pred cEECCCCCEEEEEEecCC-CEEEEEECCCcEE
Confidence 899999999988765443 3899999887543
No 176
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.62 E-value=4.3e-07 Score=85.17 Aligned_cols=60 Identities=15% Similarity=0.137 Sum_probs=48.3
Q ss_pred ccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHH
Q psy463 722 RIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLD 786 (790)
Q Consensus 722 ~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~ 786 (790)
.+ .||+.++.|++|..|..++...+.+..+ ...++.+|+| ||++.. ..+++...|.+.+.
T Consensus 174 pl-~~pi~~~~G~~D~~vs~~~~~~W~~~t~---~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 174 PL-ACPIHAFGGEKDHEVSRDELGAWREHTK---GDFTLRVFDG-GHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred Cc-CcceEEeccCcchhccHHHHHHHHHhhc---CCceEEEecC-cceehhhhHHHHHHHHHHHhh
Confidence 45 8999999999999988777666655544 3579999998 999988 77788888887775
No 177
>KOG0315|consensus
Probab=98.61 E-value=1.4e-05 Score=74.00 Aligned_cols=247 Identities=13% Similarity=0.150 Sum_probs=134.4
Q ss_pred CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEee
Q psy463 10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCS 89 (790)
Q Consensus 10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~ 89 (790)
..++..+||++.||-... -.+.+|.+.. +...++ .....+.-.+..+++.-++ .|+..+.-.-.+.+++
T Consensus 43 VNrLeiTpdk~~LAaa~~--qhvRlyD~~S--~np~Pv----~t~e~h~kNVtaVgF~~dg---rWMyTgseDgt~kIWd 111 (311)
T KOG0315|consen 43 VNRLEITPDKKDLAAAGN--QHVRLYDLNS--NNPNPV----ATFEGHTKNVTAVGFQCDG---RWMYTGSEDGTVKIWD 111 (311)
T ss_pred eeeEEEcCCcchhhhccC--CeeEEEEccC--CCCCce----eEEeccCCceEEEEEeecC---eEEEecCCCceEEEEe
Confidence 356789999999996543 3345555444 321111 1122222234444543333 3565555556667777
Q ss_pred CCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccce
Q psy463 90 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF 169 (790)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~ 169 (790)
.+.-.|++.+...+.=. .-...|.-.. +|+.+..+ +|++.|+.+.. -..++...+-
T Consensus 112 lR~~~~qR~~~~~spVn------~vvlhpnQte-Lis~dqsg------------~irvWDl~~~~-----c~~~liPe~~ 167 (311)
T KOG0315|consen 112 LRSLSCQRNYQHNSPVN------TVVLHPNQTE-LISGDQSG------------NIRVWDLGENS-----CTHELIPEDD 167 (311)
T ss_pred ccCcccchhccCCCCcc------eEEecCCcce-EEeecCCC------------cEEEEEccCCc-----cccccCCCCC
Confidence 77777777666532111 1133444444 33443333 89999997762 2445555544
Q ss_pred EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccC-cCCccccccccceeehhhcccCCCCCCCE
Q psy463 170 TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD-KVPVPLTRGRFTVTEILAWDEKENNVEPV 248 (790)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~lt~~~~~~~~~~~~~~~~~~~~~~ 248 (790)
....-+...+++.. +.. .+ ..+..|+.++-+++..-. .+..++. ...++
T Consensus 168 ~~i~sl~v~~dgsm--l~a-~n----------nkG~cyvW~l~~~~~~s~l~P~~k~~-----------------ah~~~ 217 (311)
T KOG0315|consen 168 TSIQSLTVMPDGSM--LAA-AN----------NKGNCYVWRLLNHQTASELEPVHKFQ-----------------AHNGH 217 (311)
T ss_pred cceeeEEEcCCCcE--EEE-ec----------CCccEEEEEccCCCccccceEhhhee-----------------cccce
Confidence 55555566666652 221 11 125667666655432111 1112222 56788
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCCC-ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINEG-TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV 327 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~ 327 (790)
+..-.+|||+|+++..+.+.. +++.+.++- +....+ .+...|.. +-.||.||.+|+ +++ .++
T Consensus 218 il~C~lSPd~k~lat~ssdkt---v~iwn~~~~~kle~~l--~gh~rWvW---dc~FS~dg~Ylv-Tas----sd~---- 280 (311)
T KOG0315|consen 218 ILRCLLSPDVKYLATCSSDKT---VKIWNTDDFFKLELVL--TGHQRWVW---DCAFSADGEYLV-TAS----SDH---- 280 (311)
T ss_pred EEEEEECCCCcEEEeecCCce---EEEEecCCceeeEEEe--ecCCceEE---eeeeccCccEEE-ecC----CCC----
Confidence 899999999996655544332 677766665 222222 22245654 689999999887 665 344
Q ss_pred CcccEEEEEEcCCCC
Q psy463 328 DSWDHLTFIDLDDQA 342 (790)
Q Consensus 328 ~~~~~l~~~d~~~~~ 342 (790)
. ..++++..++
T Consensus 281 --~--~rlW~~~~~k 291 (311)
T KOG0315|consen 281 --T--ARLWDLSAGK 291 (311)
T ss_pred --c--eeecccccCc
Confidence 3 4455666665
No 178
>KOG2314|consensus
Probab=98.60 E-value=4.7e-05 Score=78.42 Aligned_cols=170 Identities=14% Similarity=0.212 Sum_probs=97.9
Q ss_pred EEEEEEccCCc-EEEEEeccCc-ceEEEEEECCCCce---eEEEEEeCCCcccccCCceeEccCCCEEEEEEcc-cccc-
Q psy463 249 LSRVNWANESV-VAAWVNRVQN-RARITRCSINEGTC---DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSH-NQES- 321 (790)
Q Consensus 249 ~~~~~wspDg~-~~~~~~r~~~-~~~i~~~~~~~g~~---~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~-~~~~- 321 (790)
+..+.|||-+. +++|+....+ ..++-++.+-+++. +.|+... .-..-|-..|++|.|-+.. ....
T Consensus 349 Ir~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVs--------DckLhWQk~gdyLcvkvdR~tK~~~ 420 (698)
T KOG2314|consen 349 IRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVS--------DCKLHWQKSGDYLCVKVDRHTKSKV 420 (698)
T ss_pred ccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeee--------ccEEEeccCCcEEEEEEEeeccccc
Confidence 55789999999 7777765443 34566666665543 2334332 2257799999999876531 1011
Q ss_pred CCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463 322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI 401 (790)
Q Consensus 322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 401 (790)
.|. ...-+|++++ ... .....+.- ...+. .++|.|.|.+....+........+.|.+.... .++..+
T Consensus 421 ~g~---f~n~eIfrir--eKd----Ipve~vel-ke~vi-~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~--~~~~lV 487 (698)
T KOG2314|consen 421 KGQ---FSNLEIFRIR--EKD----IPVEVVEL-KESVI-AFAWEPHGDKFAVISGNTVKNTVSFYAVETNI--KKPSLV 487 (698)
T ss_pred cce---EeeEEEEEee--ccC----CCceeeec-chhee-eeeeccCCCeEEEEEccccccceeEEEeecCC--Cchhhh
Confidence 121 1122444444 222 00111111 11223 38999999988877665222336777776544 444433
Q ss_pred eecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463 402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT 445 (790)
Q Consensus 402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~ 445 (790)
..- ..-....+.|||.|+++|...-......++.+|++
T Consensus 488 k~~------dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~ 525 (698)
T KOG2314|consen 488 KEL------DKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTD 525 (698)
T ss_pred hhh------cccccceEEEcCCCcEEEEEEecccccceEEEecc
Confidence 321 23355678999999999887665556778888765
No 179
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.60 E-value=2.3e-07 Score=93.37 Aligned_cols=114 Identities=18% Similarity=0.081 Sum_probs=77.0
Q ss_pred CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463 499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL 578 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 578 (790)
...|++|++||..+.. ...|...+...++...++.|+++|+++..... +..+.. .. ....+++...++++.+..
T Consensus 34 ~~~p~vilIHG~~~~~--~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~--y~~a~~-~~-~~v~~~la~~l~~L~~~~ 107 (275)
T cd00707 34 PSRPTRFIIHGWTSSG--EESWISDLRKAYLSRGDYNVIVVDWGRGANPN--YPQAVN-NT-RVVGAELAKFLDFLVDNT 107 (275)
T ss_pred CCCCcEEEEcCCCCCC--CCcHHHHHHHHHHhcCCCEEEEEECccccccC--hHHHHH-hH-HHHHHHHHHHHHHHHHhc
Confidence 3458899999987763 23444334444565568999999998753221 111100 00 012356677788877632
Q ss_pred CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCC
Q psy463 579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVT 620 (790)
Q Consensus 579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~ 620 (790)
+ ++.+++.++||||||.++..++.+.+. +++.+++..|..
T Consensus 108 g-~~~~~i~lIGhSlGa~vAg~~a~~~~~-~v~~iv~LDPa~ 147 (275)
T cd00707 108 G-LSLENVHLIGHSLGAHVAGFAGKRLNG-KLGRITGLDPAG 147 (275)
T ss_pred C-CChHHEEEEEecHHHHHHHHHHHHhcC-ccceeEEecCCc
Confidence 3 567899999999999999999998875 788888887753
No 180
>KOG0286|consensus
Probab=98.60 E-value=2.9e-05 Score=73.60 Aligned_cols=159 Identities=11% Similarity=0.120 Sum_probs=102.2
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEcc-CCCEEEEEEccccccC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSS-DGKKMLLILSHNQESD 322 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~sp-Dg~~i~~~~~~~~~~~ 322 (790)
...+|++.-.+.+|+.++..+. ...+.+.|+++|+....+..- . +-.-...++| |++.++ ..+ -+
T Consensus 143 gHtgylScC~f~dD~~ilT~SG----D~TCalWDie~g~~~~~f~GH--~---gDV~slsl~p~~~ntFv-Sg~----cD 208 (343)
T KOG0286|consen 143 GHTGYLSCCRFLDDNHILTGSG----DMTCALWDIETGQQTQVFHGH--T---GDVMSLSLSPSDGNTFV-SGG----CD 208 (343)
T ss_pred CccceeEEEEEcCCCceEecCC----CceEEEEEcccceEEEEecCC--c---ccEEEEecCCCCCCeEE-ecc----cc
Confidence 6778899999999998776543 334999999999887666521 1 1134678899 898776 554 33
Q ss_pred CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463 323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT 402 (790)
Q Consensus 323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt 402 (790)
. .-+++|+..+. ..+....++.++.. +.|.|+|..++--+.++. -+||-+..+- +.....
T Consensus 209 ~--------~aklWD~R~~~-----c~qtF~ghesDINs-v~ffP~G~afatGSDD~t---cRlyDlRaD~---~~a~ys 268 (343)
T KOG0286|consen 209 K--------SAKLWDVRSGQ-----CVQTFEGHESDINS-VRFFPSGDAFATGSDDAT---CRLYDLRADQ---ELAVYS 268 (343)
T ss_pred c--------ceeeeeccCcc-----eeEeecccccccce-EEEccCCCeeeecCCCce---eEEEeecCCc---EEeeec
Confidence 4 34667877665 13335555555554 789999985554444443 5676655432 222222
Q ss_pred ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEec
Q psy463 403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDK 444 (790)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~ 444 (790)
. ....+.+.++.||..|+.+...++..+ ..++|.
T Consensus 269 ~-----~~~~~gitSv~FS~SGRlLfagy~d~~---c~vWDt 302 (343)
T KOG0286|consen 269 H-----DSIICGITSVAFSKSGRLLFAGYDDFT---CNVWDT 302 (343)
T ss_pred c-----CcccCCceeEEEcccccEEEeeecCCc---eeEeec
Confidence 2 124678899999999998866555544 556554
No 181
>KOG1446|consensus
Probab=98.60 E-value=4.2e-05 Score=73.57 Aligned_cols=150 Identities=19% Similarity=0.195 Sum_probs=84.9
Q ss_pred EEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCcc-ccccccceeehhhcccCCCCCCCEEE
Q psy463 172 TEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP-LTRGRFTVTEILAWDEKENNVEPVLS 250 (790)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~~~~~~~~~ 250 (790)
..+.++||.+ ++|+..... ..|-++|+..=.+. |-+ +.-+ ........
T Consensus 143 ~pi~AfDp~G---LifA~~~~~----------~~IkLyD~Rs~dkg----PF~tf~i~--------------~~~~~ew~ 191 (311)
T KOG1446|consen 143 RPIAAFDPEG---LIFALANGS----------ELIKLYDLRSFDKG----PFTTFSIT--------------DNDEAEWT 191 (311)
T ss_pred CcceeECCCC---cEEEEecCC----------CeEEEEEecccCCC----CceeEccC--------------CCCcccee
Confidence 3567889887 777776532 26677776531100 211 1100 02234567
Q ss_pred EEEEccCCcE-EEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463 251 RVNWANESVV-AAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS 329 (790)
Q Consensus 251 ~~~wspDg~~-~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~ 329 (790)
.+.+|||||. +..++.+. ++++|.-+|....-++.....+ ....+..|+|||+.|+ ..+ .+|
T Consensus 192 ~l~FS~dGK~iLlsT~~s~----~~~lDAf~G~~~~tfs~~~~~~--~~~~~a~ftPds~Fvl-~gs----~dg------ 254 (311)
T KOG1446|consen 192 DLEFSPDGKSILLSTNASF----IYLLDAFDGTVKSTFSGYPNAG--NLPLSATFTPDSKFVL-SGS----DDG------ 254 (311)
T ss_pred eeEEcCCCCEEEEEeCCCc----EEEEEccCCcEeeeEeeccCCC--CcceeEEECCCCcEEE-Eec----CCC------
Confidence 8999999994 44444333 9999999998654444321111 1124789999999665 444 566
Q ss_pred ccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 330 WDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 330 ~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
.|.++++++|+ +...+..........+.|+|. +..|.+..
T Consensus 255 --~i~vw~~~tg~-----~v~~~~~~~~~~~~~~~fnP~--~~mf~sa~ 294 (311)
T KOG1446|consen 255 --TIHVWNLETGK-----KVAVLRGPNGGPVSCVRFNPR--YAMFVSAS 294 (311)
T ss_pred --cEEEEEcCCCc-----EeeEecCCCCCCccccccCCc--eeeeeecC
Confidence 67888888876 132332211222233668774 44555544
No 182
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.59 E-value=1.7e-06 Score=83.89 Aligned_cols=131 Identities=21% Similarity=0.159 Sum_probs=78.5
Q ss_pred cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHh---cCCeEEEEEcCCCCCCChhhhHhhhhc
Q psy463 481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLAD---NKDIVVAYIDGRNSALKGNTLKYAGYR 557 (790)
Q Consensus 481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~---~~G~~v~~~d~rG~~~~g~~~~~~~~~ 557 (790)
.+..-.+++|+++. +..++|++++.||--..+... .......+.+ -...+++.+|+--.......+.
T Consensus 80 ~~~~~vv~lppgy~--~~~k~pvl~~~DG~~~~~~g~---i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~----- 149 (299)
T COG2382 80 SERRRVVYLPPGYN--PLEKYPVLYLQDGQDWFRSGR---IPRILDSLIAAGEIPPAILVGIDYIDVKKRREELH----- 149 (299)
T ss_pred cceeEEEEeCCCCC--ccccccEEEEeccHHHHhcCC---hHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhc-----
Confidence 45666788899988 888999999999854332100 0011122222 1245677777653222111111
Q ss_pred cCCccchhHHH-HHHHHHHHhCCC-cCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc
Q psy463 558 RLGTVEIYDQI-NVTRYLQENLPY-IDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI 623 (790)
Q Consensus 558 ~~~~~~~~D~~-~~~~~l~~~~~~-~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~ 623 (790)
... .-...+. +.+-++.++++. -+..+-+++|.|+||.++++++.++|+ .|-++++.+|..++.
T Consensus 150 ~n~-~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe-~FG~V~s~Sps~~~~ 215 (299)
T COG2382 150 CNE-AYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPE-RFGHVLSQSGSFWWT 215 (299)
T ss_pred ccH-HHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCch-hhceeeccCCccccC
Confidence 000 0011111 223344444442 245678899999999999999999986 999999999987654
No 183
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.59 E-value=4.1e-06 Score=71.94 Aligned_cols=105 Identities=14% Similarity=0.020 Sum_probs=58.6
Q ss_pred ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC--ChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463 501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL--KGNTLKYAGYRRLGTVEIYDQINVTRYLQENL 578 (790)
Q Consensus 501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~--~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 578 (790)
..+|++.||.+.. .++-...-....++.+|+.|..+++.-... .|. ......-+ ..-.....++..+..
T Consensus 14 ~~tilLaHGAGas---mdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~---rkPp~~~~-t~~~~~~~~~aql~~-- 84 (213)
T COG3571 14 PVTILLAHGAGAS---MDSTSMTAVAAALARRGWLVARFEFPYMAARRTGR---RKPPPGSG-TLNPEYIVAIAQLRA-- 84 (213)
T ss_pred CEEEEEecCCCCC---CCCHHHHHHHHHHHhCceeEEEeecchhhhccccC---CCCcCccc-cCCHHHHHHHHHHHh--
Confidence 3467788987765 233333334455667999999998642111 110 00111111 112233444555554
Q ss_pred CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEe
Q psy463 579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISV 616 (790)
Q Consensus 579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~ 616 (790)
..+..+.++.|+||||-++.+++..-.- .+.++++.
T Consensus 85 -~l~~gpLi~GGkSmGGR~aSmvade~~A-~i~~L~cl 120 (213)
T COG3571 85 -GLAEGPLIIGGKSMGGRVASMVADELQA-PIDGLVCL 120 (213)
T ss_pred -cccCCceeeccccccchHHHHHHHhhcC-CcceEEEe
Confidence 2455689999999999999888763322 24444443
No 184
>KOG0973|consensus
Probab=98.57 E-value=6.4e-06 Score=91.54 Aligned_cols=113 Identities=17% Similarity=0.138 Sum_probs=68.1
Q ss_pred eecCCceeEeCCCCCceEEEEecCCceeEEEecc------cCC---C-CCCCcCCCccccCCCCccccccCCCcceeEee
Q psy463 6 VLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPF------YGN---P-GHPSSQYTQAINLREPVLSRVNWANESVVAAW 75 (790)
Q Consensus 6 ~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~------~g~---~-~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 75 (790)
..+...-..|||||++||+-+. +.-..||.... .|. . +++.......++-+...+.++.|++++..+.-
T Consensus 68 h~~sv~CVR~S~dG~~lAsGSD-D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS 146 (942)
T KOG0973|consen 68 HDGSVNCVRFSPDGSYLASGSD-DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVS 146 (942)
T ss_pred ccCceeEEEECCCCCeEeeccC-cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEE
Confidence 4556677889999999999765 56677787762 211 1 22223344445556666778889886654322
Q ss_pred eecccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEe
Q psy463 76 VNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLIL 127 (790)
Q Consensus 76 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~ 127 (790)
. .....+-+++..++++..+...+.. .....+|.|=|++|+-.+
T Consensus 147 ~---s~DnsViiwn~~tF~~~~vl~~H~s-----~VKGvs~DP~Gky~ASqs 190 (942)
T KOG0973|consen 147 V---SLDNSVIIWNAKTFELLKVLRGHQS-----LVKGVSWDPIGKYFASQS 190 (942)
T ss_pred e---cccceEEEEccccceeeeeeecccc-----cccceEECCccCeeeeec
Confidence 2 2334555677777766665554321 123457888888776444
No 185
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.56 E-value=2.8e-06 Score=84.85 Aligned_cols=256 Identities=14% Similarity=0.172 Sum_probs=130.6
Q ss_pred EEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccch-HHHHHhcCCeEEEEEcCCCCCCChhh------hHh-
Q psy463 482 EAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDW-NLYLADNKDIVVAYIDGRNSALKGNT------LKY- 553 (790)
Q Consensus 482 ~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~-~~~~~~~~G~~v~~~d~rG~~~~g~~------~~~- 553 (790)
+.+..++.|...+ .+..|+.|++.|.+.... .....+ ...++. .|+..+.+..+-.+..... ...
T Consensus 76 ~a~~~~~~P~~~~---~~~rp~~IhLagTGDh~f---~rR~~l~a~pLl~-~gi~s~~le~Pyyg~RkP~~Q~~s~l~~V 148 (348)
T PF09752_consen 76 TARFQLLLPKRWD---SPYRPVCIHLAGTGDHGF---WRRRRLMARPLLK-EGIASLILENPYYGQRKPKDQRRSSLRNV 148 (348)
T ss_pred heEEEEEECCccc---cCCCceEEEecCCCccch---hhhhhhhhhHHHH-cCcceEEEecccccccChhHhhcccccch
Confidence 3455667787542 345799999988766522 111222 445555 5999887774432221100 000
Q ss_pred hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhh
Q psy463 554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERY 633 (790)
Q Consensus 554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~ 633 (790)
...-..|...+.+....+.|+.+ .++ .+++|.|.||||.+|..+++.+|. .+.++-+.++.+. ...|.+..
T Consensus 149 sDl~~~g~~~i~E~~~Ll~Wl~~-~G~---~~~g~~G~SmGG~~A~laa~~~p~-pv~~vp~ls~~sA----s~vFt~Gv 219 (348)
T PF09752_consen 149 SDLFVMGRATILESRALLHWLER-EGY---GPLGLTGISMGGHMAALAASNWPR-PVALVPCLSWSSA----SVVFTEGV 219 (348)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHh-cCC---CceEEEEechhHhhHHhhhhcCCC-ceeEEEeecccCC----Ccchhhhh
Confidence 01112233557788888999988 463 699999999999999999998885 4444444443322 12222222
Q ss_pred cCCCCccCchhh-hhhccccchhhhccCCcE-EEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhh
Q psy463 634 MGLPTFEDNLEG-YKIAALNNKVDRIRDKQY-LLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGY 711 (790)
Q Consensus 634 ~g~~~~~~~~~~-~~~~~~~~~~~~~~~~p~-l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (790)
|.....|..... +......+....+...+. +..+.. .......++.++...+.. ..
T Consensus 220 ls~~i~W~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Ea~~~m~~~md--~~------------------- 277 (348)
T PF09752_consen 220 LSNSINWDALEKQFEDTVYEEEISDIPAQNKSLPLDSM-EERRRDREALRFMRGVMD--SF------------------- 277 (348)
T ss_pred hhcCCCHHHHHHHhcccchhhhhcccccCcccccchhh-ccccchHHHHHHHHHHHH--hh-------------------
Confidence 211100111100 000000000000000000 000000 001111122222111110 00
Q ss_pred hhhhhhhhhhcc----CCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHH
Q psy463 712 KIAALNNKVDRI----RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFL 785 (790)
Q Consensus 712 ~~~~~~~~~~~i----~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl 785 (790)
.++.++ ....+.++.+++|..||..+...|.+.++.. ++.++++ ||.-.. +...+-+.|.+=|
T Consensus 278 ------T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGs----EvR~l~g-GHVsA~L~~q~~fR~AI~Daf 346 (348)
T PF09752_consen 278 ------THLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGS----EVRYLPG-GHVSAYLLHQEAFRQAIYDAF 346 (348)
T ss_pred ------ccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCCCC----eEEEecC-CcEEEeeechHHHHHHHHHHh
Confidence 222333 1455788999999999999888888888754 6667887 997654 5666667776655
Q ss_pred H
Q psy463 786 D 786 (790)
Q Consensus 786 ~ 786 (790)
+
T Consensus 347 ~ 347 (348)
T PF09752_consen 347 E 347 (348)
T ss_pred h
Confidence 4
No 186
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.56 E-value=5e-05 Score=82.48 Aligned_cols=234 Identities=20% Similarity=0.287 Sum_probs=131.3
Q ss_pred ccccc-eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCC
Q psy463 164 LTRGR-FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKE 242 (790)
Q Consensus 164 lt~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~ 242 (790)
+..+. +.......++|+++. +.|.....++ ...+|+++|+++|+.... .+.
T Consensus 117 l~~~~~~~~~~~~~~Spdg~~-la~~~s~~G~-------e~~~l~v~Dl~tg~~l~d----~i~---------------- 168 (414)
T PF02897_consen 117 LAKDGGYVSLGGFSVSPDGKR-LAYSLSDGGS-------EWYTLRVFDLETGKFLPD----GIE---------------- 168 (414)
T ss_dssp GSTTSS-EEEEEEEETTTSSE-EEEEEEETTS-------SEEEEEEEETTTTEEEEE----EEE----------------
T ss_pred hhccCceEEeeeeeECCCCCE-EEEEecCCCC-------ceEEEEEEECCCCcCcCC----ccc----------------
Confidence 44343 445555667777764 3333333222 236899999999853211 111
Q ss_pred CCCCCEEEEEEEccCCcEEEEEeccC--c------ceEEEEEECCCCcee--EEEEEeCCCcccccCCceeEccCCCEEE
Q psy463 243 NNVEPVLSRVNWANESVVAAWVNRVQ--N------RARITRCSINEGTCD--VVFSRDLDRGWFEPFDHLRFSSDGKKML 312 (790)
Q Consensus 243 ~~~~~~~~~~~wspDg~~~~~~~r~~--~------~~~i~~~~~~~g~~~--~l~~~~~~~~~~~~~~~~~~spDg~~i~ 312 (790)
......+.|++||+.++++..+. . ..++++..+.++... .|+.+.....| .-....|+||+.|+
T Consensus 169 ---~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~---~~~~~~s~d~~~l~ 242 (414)
T PF02897_consen 169 ---NPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFW---FVSVSRSKDGRYLF 242 (414)
T ss_dssp ---EEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTS---EEEEEE-TTSSEEE
T ss_pred ---ccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcE---EEEEEecCcccEEE
Confidence 11122399999999666654433 2 567999999887654 66665432221 12578899999887
Q ss_pred EEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC
Q psy463 313 LILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA 392 (790)
Q Consensus 313 ~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 392 (790)
+... ... +..++|++++..+. ......+.|..........+.. .|..+|+.++.+.+ ...|+.++++
T Consensus 243 i~~~----~~~-----~~s~v~~~d~~~~~-~~~~~~~~l~~~~~~~~~~v~~--~~~~~yi~Tn~~a~-~~~l~~~~l~ 309 (414)
T PF02897_consen 243 ISSS----SGT-----SESEVYLLDLDDGG-SPDAKPKLLSPREDGVEYYVDH--HGDRLYILTNDDAP-NGRLVAVDLA 309 (414)
T ss_dssp EEEE----SSS-----SEEEEEEEECCCTT-TSS-SEEEEEESSSS-EEEEEE--ETTEEEEEE-TT-T-T-EEEEEETT
T ss_pred EEEE----ccc-----cCCeEEEEeccccC-CCcCCcEEEeCCCCceEEEEEc--cCCEEEEeeCCCCC-CcEEEEeccc
Confidence 5554 222 03789999998640 0001255555433222222222 27789998887443 2789999997
Q ss_pred CCCC-Ccc-eeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC-CCeEEE
Q psy463 393 DPTA-TPE-CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT-GQRLLY 451 (790)
Q Consensus 393 ~~~~-~~~-~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~-~~~~~~ 451 (790)
.... ..+ .+.. ......-..++..+.++++.....+.+.|.++++. +.....
T Consensus 310 ~~~~~~~~~~l~~-------~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~ 364 (414)
T PF02897_consen 310 DPSPAEWWTVLIP-------EDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKESRE 364 (414)
T ss_dssp STSGGGEEEEEE---------SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEEEEE
T ss_pred ccccccceeEEcC-------CCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcEEee
Confidence 7311 112 2222 22223334456667889888888888899999998 554443
No 187
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.55 E-value=6.1e-05 Score=79.03 Aligned_cols=252 Identities=9% Similarity=0.033 Sum_probs=115.2
Q ss_pred cCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEE
Q psy463 8 SSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITR 87 (790)
Q Consensus 8 ~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~ 87 (790)
+....+.+||||++|+-....++...+|.+...|.- . ........ .....+.++++++.++-.+...+.. .+
T Consensus 35 ~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l-~----~~~~~~~~-~~p~~i~~~~~g~~l~v~~~~~~~v--~v 106 (330)
T PRK11028 35 GQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGAL-T----FAAESPLP-GSPTHISTDHQGRFLFSASYNANCV--SV 106 (330)
T ss_pred CCCccEEECCCCCEEEEEECCCCcEEEEEECCCCce-E----EeeeecCC-CCceEEEECCCCCEEEEEEcCCCeE--EE
Confidence 345667899999988665554555555655422221 0 00000000 0112244555665544444333322 22
Q ss_pred eeCC-CCeee-EEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccC--Cccee
Q psy463 88 CSIN-EGTCD-VVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD--KVPVP 163 (790)
Q Consensus 88 ~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~--~~~~~ 163 (790)
++.. .+... .+..... ...+....++|||+.++......+ .|+++++++...... .....
T Consensus 107 ~~~~~~g~~~~~~~~~~~----~~~~~~~~~~p~g~~l~v~~~~~~------------~v~v~d~~~~g~l~~~~~~~~~ 170 (330)
T PRK11028 107 SPLDKDGIPVAPIQIIEG----LEGCHSANIDPDNRTLWVPCLKED------------RIRLFTLSDDGHLVAQEPAEVT 170 (330)
T ss_pred EEECCCCCCCCceeeccC----CCcccEeEeCCCCCEEEEeeCCCC------------EEEEEEECCCCcccccCCCcee
Confidence 3222 12111 1111000 001122368999998876553322 899999875320000 00111
Q ss_pred ccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCC--cccccCcCCccccccccceeehhhcccC
Q psy463 164 LTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDD--QAGIKDKVPVPLTRGRFTVTEILAWDEK 241 (790)
Q Consensus 164 lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~lt~~~~~~~~~~~~~~~ 241 (790)
+..|.. . .-..++++++ .+|+... . ...|.+++++. ++.+.+ ..+. ..|.
T Consensus 171 ~~~g~~-p-~~~~~~pdg~--~lyv~~~-~---------~~~v~v~~~~~~~~~~~~~---~~~~-----------~~p~ 222 (330)
T PRK11028 171 TVEGAG-P-RHMVFHPNQQ--YAYCVNE-L---------NSSVDVWQLKDPHGEIECV---QTLD-----------MMPA 222 (330)
T ss_pred cCCCCC-C-ceEEECCCCC--EEEEEec-C---------CCEEEEEEEeCCCCCEEEE---EEEe-----------cCCC
Confidence 212211 1 1236666665 5555532 1 15777777653 221111 0000 0000
Q ss_pred CCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463 242 ENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS 316 (790)
Q Consensus 242 ~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~ 316 (790)
......+-..+.++|||++++..++..+.-.++.++.+++..+.+-.... +. ....+.++|||++|+ .++
T Consensus 223 ~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~--~~--~p~~~~~~~dg~~l~-va~ 292 (330)
T PRK11028 223 DFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT--ET--QPRGFNIDHSGKYLI-AAG 292 (330)
T ss_pred cCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec--cc--cCCceEECCCCCEEE-EEE
Confidence 00112233457899999987777776554444444444443332222211 11 134789999999988 444
No 188
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.55 E-value=0.00026 Score=74.24 Aligned_cols=124 Identities=10% Similarity=0.114 Sum_probs=63.7
Q ss_pred EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCC-Ccc--cccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463 250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLD-RGW--FEPFDHLRFSSDGKKMLLILSHNQESDGSTP 326 (790)
Q Consensus 250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~-~~~--~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~ 326 (790)
..+.|+|||++++.++...+.-.+|.++..+++.+.+...... ... ........++|||+.++ +.. +..
T Consensus 178 ~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~ly-v~~---~~~---- 249 (330)
T PRK11028 178 RHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLY-ACD---RTA---- 249 (330)
T ss_pred ceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEE-Eec---CCC----
Confidence 4679999999888877655544444444334544332221100 000 00012477899999887 443 122
Q ss_pred cCcccEEEEEEcCCCCcccCCCcccc---cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463 327 VDSWDHLTFIDLDDQAGIKDKVPVPL---TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 327 ~~~~~~l~~~d~~~~~~~~~~~~~~l---t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
..|.+++++.... ..+.+ ..+. ... .+.++|||++||...... ..-.+|.++..+
T Consensus 250 ----~~I~v~~i~~~~~----~~~~~~~~~~~~-~p~-~~~~~~dg~~l~va~~~~--~~v~v~~~~~~~ 307 (330)
T PRK11028 250 ----SLISVFSVSEDGS----VLSFEGHQPTET-QPR-GFNIDHSGKYLIAAGQKS--HHISVYEIDGET 307 (330)
T ss_pred ----CeEEEEEEeCCCC----eEEEeEEEeccc-cCC-ceEECCCCCEEEEEEccC--CcEEEEEEcCCC
Confidence 2566666643210 01111 1111 112 368999999888765432 125666665443
No 189
>KOG0273|consensus
Probab=98.54 E-value=5.1e-05 Score=76.61 Aligned_cols=264 Identities=15% Similarity=0.175 Sum_probs=139.8
Q ss_pred CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCc--cccccCCCcceeEeeeecccceeEEE
Q psy463 9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPV--LSRVNWANESVVAAWVNRVQNRARIT 86 (790)
Q Consensus 9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~w~~~~~~~~~~~r~~~~~~~~ 86 (790)
....+.|+-||..||+-+. +|...|| ...|+. ...+..++ +..+.|...+..++-..-. -...
T Consensus 237 dVT~L~Wn~~G~~LatG~~-~G~~riw--~~~G~l---------~~tl~~HkgPI~slKWnk~G~yilS~~vD---~tti 301 (524)
T KOG0273|consen 237 DVTSLDWNNDGTLLATGSE-DGEARIW--NKDGNL---------ISTLGQHKGPIFSLKWNKKGTYILSGGVD---GTTI 301 (524)
T ss_pred CcceEEecCCCCeEEEeec-CcEEEEE--ecCchh---------hhhhhccCCceEEEEEcCCCCEEEeccCC---ccEE
Confidence 3478999999999998664 5555555 445553 22333333 2345666555444332222 2234
Q ss_pred EeeCCCCeeeEEEeecCCC----CccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcce
Q psy463 87 RCSINEGTCDVVFSRDLDR----GWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV 162 (790)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~ 162 (790)
++++.+|.+...+...+.. -|........-++|| .|+++.++...+ ..+
T Consensus 302 lwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~-----------------------~i~V~kv~~~~P----~~t 354 (524)
T KOG0273|consen 302 LWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDG-----------------------CIHVCKVGEDRP----VKT 354 (524)
T ss_pred EEeccCceEEEeeeeccCCccceEEecCceEeecCCCc-----------------------eEEEEEecCCCc----cee
Confidence 5666666666555543322 243221112223333 344444433321 122
Q ss_pred eccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCC
Q psy463 163 PLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKE 242 (790)
Q Consensus 163 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~ 242 (790)
+..+.. -.+.+.|++.+. +..+.+. ..+ -.||.+.-.+- ...|.
T Consensus 355 -~~GH~g-~V~alk~n~tg~---LLaS~Sd---D~T-----lkiWs~~~~~~-------~~~l~---------------- 398 (524)
T KOG0273|consen 355 -FIGHHG-EVNALKWNPTGS---LLASCSD---DGT-----LKIWSMGQSNS-------VHDLQ---------------- 398 (524)
T ss_pred -eecccC-ceEEEEECCCCc---eEEEecC---CCe-----eEeeecCCCcc-------hhhhh----------------
Confidence 222222 334457888764 3333321 111 35665432221 11121
Q ss_pred CCCCCEEEEEEEccCCc---------EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEE
Q psy463 243 NNVEPVLSRVNWANESV---------VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLL 313 (790)
Q Consensus 243 ~~~~~~~~~~~wspDg~---------~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~ 313 (790)
.....+..+.|||+|. .+++...+ ..+.++|+..|.+.-.+..-. +++...+|||||++++
T Consensus 399 -~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~d---stV~lwdv~~gv~i~~f~kH~-----~pVysvafS~~g~ylA- 468 (524)
T KOG0273|consen 399 -AHSKEIYTIKWSPTGPVTSNPNMNLMLASASFD---STVKLWDVESGVPIHTLMKHQ-----EPVYSVAFSPNGRYLA- 468 (524)
T ss_pred -hhccceeeEeecCCCCccCCCcCCceEEEeecC---CeEEEEEccCCceeEeeccCC-----CceEEEEecCCCcEEE-
Confidence 3344567889999885 23333322 237888888887765442211 2466899999999998
Q ss_pred EEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCC
Q psy463 314 ILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQG 379 (790)
Q Consensus 314 ~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~ 379 (790)
+.+ .+| -|..++..+++ ..+....+ ..+. .+.|+.+|.+|.....++
T Consensus 469 sGs----~dg--------~V~iws~~~~~-----l~~s~~~~-~~If-el~Wn~~G~kl~~~~sd~ 515 (524)
T KOG0273|consen 469 SGS----LDG--------CVHIWSTKTGK-----LVKSYQGT-GGIF-ELCWNAAGDKLGACASDG 515 (524)
T ss_pred ecC----CCC--------eeEeccccchh-----eeEeecCC-CeEE-EEEEcCCCCEEEEEecCC
Confidence 555 556 45666766666 23334433 2333 489999999887777664
No 190
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.54 E-value=6e-05 Score=76.74 Aligned_cols=237 Identities=16% Similarity=0.165 Sum_probs=136.6
Q ss_pred ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463 113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ 192 (790)
Q Consensus 113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (790)
...|+|+|+.|+.... .+.+.++++.++. ....+......+ .-..|.++++ .++....
T Consensus 14 ~~~~~~~~~~l~~~~~-------------~g~i~i~~~~~~~-----~~~~~~~~~~~i-~~~~~~~~~~--~l~~~~~- 71 (289)
T cd00200 14 CVAFSPDGKLLATGSG-------------DGTIKVWDLETGE-----LLRTLKGHTGPV-RDVAASADGT--YLASGSS- 71 (289)
T ss_pred EEEEcCCCCEEEEeec-------------CcEEEEEEeeCCC-----cEEEEecCCcce-eEEEECCCCC--EEEEEcC-
Confidence 3578999998876542 1278888877653 223333322222 2345555543 2332221
Q ss_pred CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463 193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR 272 (790)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~ 272 (790)
...|+++++.+++. ...+. .....+..+.|+|++++++..... ..
T Consensus 72 ----------~~~i~i~~~~~~~~-----~~~~~-----------------~~~~~i~~~~~~~~~~~~~~~~~~---~~ 116 (289)
T cd00200 72 ----------DKTIRLWDLETGEC-----VRTLT-----------------GHTSYVSSVAFSPDGRILSSSSRD---KT 116 (289)
T ss_pred ----------CCeEEEEEcCcccc-----eEEEe-----------------ccCCcEEEEEEcCCCCEEEEecCC---Ce
Confidence 25788888876532 22222 334467889999998866555422 23
Q ss_pred EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463 273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL 352 (790)
Q Consensus 273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l 352 (790)
+.++++.+++........ . .......|+|+++.++ ... .+| .|.++|+.+++ ....+
T Consensus 117 i~~~~~~~~~~~~~~~~~--~---~~i~~~~~~~~~~~l~-~~~----~~~--------~i~i~d~~~~~-----~~~~~ 173 (289)
T cd00200 117 IKVWDVETGKCLTTLRGH--T---DWVNSVAFSPDGTFVA-SSS----QDG--------TIKLWDLRTGK-----CVATL 173 (289)
T ss_pred EEEEECCCcEEEEEeccC--C---CcEEEEEEcCcCCEEE-EEc----CCC--------cEEEEEccccc-----cceeE
Confidence 888888866654444311 1 1144789999987665 333 345 68889987665 13333
Q ss_pred cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463 353 TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSC 431 (790)
Q Consensus 353 t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~ 431 (790)
......+.. +.|+|+++.+++.+.. ..+...++.. ++. ..+.. ....+..+.|++++.+++...
T Consensus 174 ~~~~~~i~~-~~~~~~~~~l~~~~~~-----~~i~i~d~~~--~~~~~~~~~-------~~~~i~~~~~~~~~~~~~~~~ 238 (289)
T cd00200 174 TGHTGEVNS-VAFSPDGEKLLSSSSD-----GTIKLWDLST--GKCLGTLRG-------HENGVNSVAFSPDGYLLASGS 238 (289)
T ss_pred ecCccccce-EEECCCcCEEEEecCC-----CcEEEEECCC--Cceecchhh-------cCCceEEEEEcCCCcEEEEEc
Confidence 333323343 7899999888887764 4566666654 222 12211 334677789999976665433
Q ss_pred ecCCCCeEEEEecCCC
Q psy463 432 IGPGIPEIMLFDKTGQ 447 (790)
Q Consensus 432 ~~~~~~~i~~~~~~~~ 447 (790)
....+++++...+
T Consensus 239 ---~~~~i~i~~~~~~ 251 (289)
T cd00200 239 ---EDGTIRVWDLRTG 251 (289)
T ss_pred ---CCCcEEEEEcCCc
Confidence 2345778777643
No 191
>KOG0272|consensus
Probab=98.54 E-value=7.5e-06 Score=81.34 Aligned_cols=149 Identities=11% Similarity=0.105 Sum_probs=92.7
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
+....+...+|-|||.++..-.-+. . -.+.|+.+|.+...+..- .....+..|||+|-.|+ +.+ .++
T Consensus 301 GHs~~v~~iaf~~DGSL~~tGGlD~-~--~RvWDlRtgr~im~L~gH-----~k~I~~V~fsPNGy~lA-Tgs----~Dn 367 (459)
T KOG0272|consen 301 GHSKGVFSIAFQPDGSLAATGGLDS-L--GRVWDLRTGRCIMFLAGH-----IKEILSVAFSPNGYHLA-TGS----SDN 367 (459)
T ss_pred ccccccceeEecCCCceeeccCccc-h--hheeecccCcEEEEeccc-----ccceeeEeECCCceEEe-ecC----CCC
Confidence 4556788999999999766533221 1 345678889887666431 12355899999999888 665 333
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC 403 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~ 403 (790)
..-++|+.... ....+..+...|.. +.++|++.+...++.... ..+||.-. + +. ++
T Consensus 368 --------t~kVWDLR~r~-----~ly~ipAH~nlVS~-Vk~~p~~g~fL~TasyD~--t~kiWs~~--~--~~--~~-- 423 (459)
T KOG0272|consen 368 --------TCKVWDLRMRS-----ELYTIPAHSNLVSQ-VKYSPQEGYFLVTASYDN--TVKIWSTR--T--WS--PL-- 423 (459)
T ss_pred --------cEEEeeecccc-----cceecccccchhhh-eEecccCCeEEEEcccCc--ceeeecCC--C--cc--cc--
Confidence 45667776544 13344444444444 788986665555554422 26666432 1 11 11
Q ss_pred cccccCCCcccEEEEEEecCCcEEEEEe
Q psy463 404 DLLTSANQKCSYSGATFSTNVSYYVLSC 431 (790)
Q Consensus 404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~ 431 (790)
..+++...-+.++.+|+|+.+|+-+.
T Consensus 424 --ksLaGHe~kV~s~Dis~d~~~i~t~s 449 (459)
T KOG0272|consen 424 --KSLAGHEGKVISLDISPDSQAIATSS 449 (459)
T ss_pred --hhhcCCccceEEEEeccCCceEEEec
Confidence 12344777889999999999887653
No 192
>KOG2055|consensus
Probab=98.53 E-value=1.7e-05 Score=79.84 Aligned_cols=233 Identities=15% Similarity=0.167 Sum_probs=133.6
Q ss_pred ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463 113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ 192 (790)
Q Consensus 113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (790)
...|+|+|+..+|.+.++. -+|.+|+.+.+.. ++....+.. ...+....+.++++ -|.+..
T Consensus 262 ~a~f~p~G~~~i~~s~rrk------------y~ysyDle~ak~~--k~~~~~g~e-~~~~e~FeVShd~~-fia~~G--- 322 (514)
T KOG2055|consen 262 KAEFAPNGHSVIFTSGRRK------------YLYSYDLETAKVT--KLKPPYGVE-EKSMERFEVSHDSN-FIAIAG--- 322 (514)
T ss_pred eeeecCCCceEEEecccce------------EEEEeeccccccc--cccCCCCcc-cchhheeEecCCCC-eEEEcc---
Confidence 3588999997777765443 6899999877521 222211111 12222333344443 122222
Q ss_pred CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcce
Q psy463 193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRA 271 (790)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~ 271 (790)
..++|+++...+++- ...+ .-++.+..+.||.||+ +++....+
T Consensus 323 ---------~~G~I~lLhakT~el-----i~s~------------------KieG~v~~~~fsSdsk~l~~~~~~G---- 366 (514)
T KOG2055|consen 323 ---------NNGHIHLLHAKTKEL-----ITSF------------------KIEGVVSDFTFSSDSKELLASGGTG---- 366 (514)
T ss_pred ---------cCceEEeehhhhhhh-----hhee------------------eeccEEeeEEEecCCcEEEEEcCCc----
Confidence 237999998877652 0011 3467789999999999 44443333
Q ss_pred EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEc--CCCCcccCCCc
Q psy463 272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDL--DDQAGIKDKVP 349 (790)
Q Consensus 272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~--~~~~~~~~~~~ 349 (790)
++|+.|+....|...+..++.- . -.++..|++|.+++ +.+ ..| .-+||-.+- .++. +
T Consensus 367 eV~v~nl~~~~~~~rf~D~G~v---~-gts~~~S~ng~ylA-~GS----~~G------iVNIYd~~s~~~s~~------P 425 (514)
T KOG2055|consen 367 EVYVWNLRQNSCLHRFVDDGSV---H-GTSLCISLNGSYLA-TGS----DSG------IVNIYDGNSCFASTN------P 425 (514)
T ss_pred eEEEEecCCcceEEEEeecCcc---c-eeeeeecCCCceEE-ecc----Ccc------eEEEeccchhhccCC------C
Confidence 4999999988777666554321 1 23678899999887 666 567 555554331 1222 4
Q ss_pred ccccCC---CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcE
Q psy463 350 VPLTRG---RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSY 426 (790)
Q Consensus 350 ~~lt~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~ 426 (790)
+++..- ...+. .++|++|+..|+..+.... ..|..+.+.+. .+ .++. -...+.-+.+..+.|||.|.+
T Consensus 426 kPik~~dNLtt~It-sl~Fn~d~qiLAiaS~~~k---nalrLVHvPS~--TV--FsNf-P~~n~~vg~vtc~aFSP~sG~ 496 (514)
T KOG2055|consen 426 KPIKTVDNLTTAIT-SLQFNHDAQILAIASRVKK---NALRLVHVPSC--TV--FSNF-PTSNTKVGHVTCMAFSPNSGY 496 (514)
T ss_pred Cchhhhhhhheeee-eeeeCcchhhhhhhhhccc---cceEEEeccce--ee--eccC-CCCCCcccceEEEEecCCCce
Confidence 444321 12333 4899999997777766522 34555554331 10 0000 000112346677999999999
Q ss_pred EEEE
Q psy463 427 YVLS 430 (790)
Q Consensus 427 ~~~~ 430 (790)
+++.
T Consensus 497 lAvG 500 (514)
T KOG2055|consen 497 LAVG 500 (514)
T ss_pred EEee
Confidence 9875
No 193
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.52 E-value=4.3e-05 Score=78.06 Aligned_cols=337 Identities=13% Similarity=0.115 Sum_probs=175.2
Q ss_pred CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeE-eeeecccc---e--
Q psy463 9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVA-AWVNRVQN---R-- 82 (790)
Q Consensus 9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~-~~~~r~~~---~-- 82 (790)
......|||-|+.|+.... .++++|..|..+- .++.....+...++++.++.+ .|..+... .
T Consensus 34 p~~~~~~SP~G~~l~~~~~--~~V~~~~g~~~~~----------l~~~~~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~ 101 (561)
T COG5354 34 PVAYVSESPLGTYLFSEHA--AGVECWGGPSKAK----------LVRFRHPDVKYLDFSPNEKYLVTWSREPIIEPEIEI 101 (561)
T ss_pred chhheeecCcchheehhhc--cceEEccccchhh----------eeeeecCCceecccCcccceeeeeccCCccChhhcc
Confidence 3456779999999986543 4566665555331 344444455566777777755 77655431 1
Q ss_pred ------eEEEEeeCCCCeeeEEEeecCCC--CccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcC
Q psy463 83 ------ARITRCSINEGTCDVVFSRDLDR--GWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQA 154 (790)
Q Consensus 83 ------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~ 154 (790)
-.+-+++..+|....-+...... +| +...||-|.+..+.... ..|+++++ ++.
T Consensus 102 sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~W----p~~k~s~~D~y~ARvv~--------------~sl~i~e~-t~n 162 (561)
T COG5354 102 SPFTSKNNVFVWDIASGMIVFSFNGISQPYLGW----PVLKFSIDDKYVARVVG--------------SSLYIHEI-TDN 162 (561)
T ss_pred CCccccCceeEEeccCceeEeeccccCCccccc----ceeeeeecchhhhhhcc--------------CeEEEEec-CCc
Confidence 13445566666544433333222 34 12478888888776541 26788876 332
Q ss_pred CccCCcceeccccceEEEEEEeeeccCCcc-EEEEecccCCCCCCCccccceeEEEecCCcccccCcCCcccccccccee
Q psy463 155 GIKDKVPVPLTRGRFTVTEILAWDERENNP-LLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT 233 (790)
Q Consensus 155 ~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~ 233 (790)
..... ...|. .+-+.-..|.|.+++. +.|..---.+. +..-.||.+...+- .++-+
T Consensus 163 ~~~~p-~~~lr---~~gi~dFsisP~~n~~~la~~tPEk~~k-----pa~~~i~sIp~~s~-------l~tk~------- 219 (561)
T COG5354 163 IEEHP-FKNLR---PVGILDFSISPEGNHDELAYWTPEKLNK-----PAMVRILSIPKNSV-------LVTKN------- 219 (561)
T ss_pred cccCc-hhhcc---ccceeeEEecCCCCCceEEEEccccCCC-----CcEEEEEEccCCCe-------eeeee-------
Confidence 11000 11111 1111223455553332 23333211111 22245666552221 11111
Q ss_pred ehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccC--c-----ceEEEEEECCCCceeEEEEEeCCCcccccCCceeEc
Q psy463 234 EILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQ--N-----RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFS 305 (790)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~--~-----~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~s 305 (790)
-....-..+.|-+.|+ ++..+.+.- + ...||+|+.....++...... ++..++.|+
T Consensus 220 ----------lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~------~pVhdf~W~ 283 (561)
T COG5354 220 ----------LFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLK------DPVHDFTWE 283 (561)
T ss_pred ----------eEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceecccc------ccceeeeec
Confidence 1122235788999999 444333321 1 257899998865555432211 247799999
Q ss_pred cCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEE
Q psy463 306 SDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQH 385 (790)
Q Consensus 306 pDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 385 (790)
|++++++++..- . ...+-..|+.++- .-.+.... ..-+.|||.++++++..-+.- ...
T Consensus 284 p~S~~F~vi~g~---~--------pa~~s~~~lr~Nl------~~~~Pe~~---rNT~~fsp~~r~il~agF~nl--~gn 341 (561)
T COG5354 284 PLSSRFAVISGY---M--------PASVSVFDLRGNL------RFYFPEQK---RNTIFFSPHERYILFAGFDNL--QGN 341 (561)
T ss_pred ccCCceeEEecc---c--------ccceeecccccce------EEecCCcc---cccccccCcccEEEEecCCcc--ccc
Confidence 999999965531 1 1234455655542 11111111 112568999999988776622 245
Q ss_pred EEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC---CCeEEEEecCC
Q psy463 386 MYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG---IPEIMLFDKTG 446 (790)
Q Consensus 386 l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~---~~~i~~~~~~~ 446 (790)
+-.++..+ +-.+++.. ..-+.....|||||+++.....++- -..+.++|..+
T Consensus 342 i~i~~~~~---rf~~~~~~------~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g 396 (561)
T COG5354 342 IEIFDPAG---RFKVAGAF------NGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYG 396 (561)
T ss_pred eEEeccCC---ceEEEEEe------ecCCceEeeccCCceEEEecCCCcccccCcceEEEEecC
Confidence 55555554 44555432 2234455679999998877766554 22355555544
No 194
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.52 E-value=4.4e-05 Score=78.23 Aligned_cols=121 Identities=10% Similarity=0.254 Sum_probs=71.7
Q ss_pred EEEcc-CCcEEEEEeccCcceEEEEEECCCCceeE-----EEE-EeCCCcccc-cCCceeEccCCCEEEEEEccccc---
Q psy463 252 VNWAN-ESVVAAWVNRVQNRARITRCSINEGTCDV-----VFS-RDLDRGWFE-PFDHLRFSSDGKKMLLILSHNQE--- 320 (790)
Q Consensus 252 ~~wsp-Dg~~~~~~~r~~~~~~i~~~~~~~g~~~~-----l~~-~~~~~~~~~-~~~~~~~spDg~~i~~~~~~~~~--- 320 (790)
|.+++ ||++++.+..+ .++.+|+.+..... +.. .+...+|.- .....+++|||+++++... ...
T Consensus 199 P~~~~~dg~~~~vs~eG----~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~-~~~~~t 273 (352)
T TIGR02658 199 PAYSNKSGRLVWPTYTG----KIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLAD-QRAKWT 273 (352)
T ss_pred CceEcCCCcEEEEecCC----eEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEec-CCcccc
Confidence 34466 88876666553 39999976543322 211 111234541 1124899999999985332 101
Q ss_pred -cCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463 321 -SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 321 -~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
..+ -.+|+++|+.+++ ....+.-+. ... .++++||++.++|.++... ..|.++|..+
T Consensus 274 hk~~------~~~V~ViD~~t~k-----vi~~i~vG~-~~~-~iavS~Dgkp~lyvtn~~s---~~VsViD~~t 331 (352)
T TIGR02658 274 HKTA------SRFLFVVDAKTGK-----RLRKIELGH-EID-SINVSQDAKPLLYALSTGD---KTLYIFDAET 331 (352)
T ss_pred ccCC------CCEEEEEECCCCe-----EEEEEeCCC-cee-eEEECCCCCeEEEEeCCCC---CcEEEEECcC
Confidence 122 3589999998887 234444343 222 3789999995556666533 5688888866
No 195
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.51 E-value=0.00019 Score=70.76 Aligned_cols=280 Identities=11% Similarity=0.037 Sum_probs=142.8
Q ss_pred eecCCceeEeCCCCCceEEEEec--CCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeeccccee
Q psy463 6 VLSSSSALWFSPSGNNLAYASFD--DNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRA 83 (790)
Q Consensus 6 ~~~~~~~~~wSPDG~~iaf~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~ 83 (790)
.+++.+-++|+||+|.|--+-.. .+....|.+.-..|....+...+ +.-....-+.-+.+++.++-.+...+..
T Consensus 38 ~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~----~~g~~p~yvsvd~~g~~vf~AnY~~g~v 113 (346)
T COG2706 38 ELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQT----LPGSPPCYVSVDEDGRFVFVANYHSGSV 113 (346)
T ss_pred ccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccc----cCCCCCeEEEECCCCCEEEEEEccCceE
Confidence 36777888999999977555444 34455555554334211000000 0000001122334554444444443333
Q ss_pred EEEEeeCCCCeeeEEEeecCC--CCccccCC-----ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCc
Q psy463 84 RITRCSINEGTCDVVFSRDLD--RGWFEPFD-----HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGI 156 (790)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~ 156 (790)
.+.-.... |....+...... .+.-++.. ...++|||+.|+-..-.- ..|++++++.|.-.
T Consensus 114 ~v~p~~~d-G~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~------------Dri~~y~~~dg~L~ 180 (346)
T COG2706 114 SVYPLQAD-GSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGT------------DRIFLYDLDDGKLT 180 (346)
T ss_pred EEEEcccC-CccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCC------------ceEEEEEcccCccc
Confidence 33333332 333322111111 11111111 237899999877544222 28999998877411
Q ss_pred cCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehh
Q psy463 157 KDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL 236 (790)
Q Consensus 157 ~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~ 236 (790)
. .....+..|.. . .-+.+.|..+ +.|+-.- -+ ..=.+|-++-..|+-..++. .
T Consensus 181 ~-~~~~~v~~G~G-P-RHi~FHpn~k--~aY~v~E-L~-------stV~v~~y~~~~g~~~~lQ~--------------i 233 (346)
T COG2706 181 P-ADPAEVKPGAG-P-RHIVFHPNGK--YAYLVNE-LN-------STVDVLEYNPAVGKFEELQT--------------I 233 (346)
T ss_pred c-ccccccCCCCC-c-ceEEEcCCCc--EEEEEec-cC-------CEEEEEEEcCCCceEEEeee--------------e
Confidence 1 00112222211 0 1123444444 4444321 11 01233444433344333321 1
Q ss_pred hcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463 237 AWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS 316 (790)
Q Consensus 237 ~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~ 316 (790)
...|++=........+..|||||+++.++|+.+.-.+|.++..+|..+.+........+ .+.+.++|+|+.|+ .+.
T Consensus 234 ~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~---PR~F~i~~~g~~Li-aa~ 309 (346)
T COG2706 234 DTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQF---PRDFNINPSGRFLI-AAN 309 (346)
T ss_pred ccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcC---CccceeCCCCCEEE-EEc
Confidence 11222213456678899999999999999999888899999999987655444322212 35789999999887 455
Q ss_pred cccccCCCCCcCcccEEEEEEcCCCC
Q psy463 317 HNQESDGSTPVDSWDHLTFIDLDDQA 342 (790)
Q Consensus 317 ~~~~~~g~~~~~~~~~l~~~d~~~~~ 342 (790)
+++. .-.+|.+|-++|+
T Consensus 310 ---q~sd------~i~vf~~d~~TG~ 326 (346)
T COG2706 310 ---QKSD------NITVFERDKETGR 326 (346)
T ss_pred ---cCCC------cEEEEEEcCCCce
Confidence 3444 4567888877776
No 196
>KOG1407|consensus
Probab=98.50 E-value=2.4e-05 Score=72.90 Aligned_cols=102 Identities=14% Similarity=0.204 Sum_probs=67.2
Q ss_pred ceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCC
Q psy463 301 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGS 380 (790)
Q Consensus 301 ~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~ 380 (790)
-+.|+||||+++ +.+ .+- .+-++|++.=- ..+.++..+|.++. ++||-||++|+-.+.+
T Consensus 194 cI~f~p~GryfA-~Gs----ADA--------lvSLWD~~ELi-----C~R~isRldwpVRT-lSFS~dg~~lASaSED-- 252 (313)
T KOG1407|consen 194 CIEFDPDGRYFA-TGS----ADA--------LVSLWDVDELI-----CERCISRLDWPVRT-LSFSHDGRMLASASED-- 252 (313)
T ss_pred EEEECCCCceEe-ecc----ccc--------eeeccChhHhh-----hheeeccccCceEE-EEeccCcceeeccCcc--
Confidence 367999999988 554 222 34456654321 35678888898887 8999999988766554
Q ss_pred CceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463 381 PIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG 435 (790)
Q Consensus 381 ~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~ 435 (790)
.-|=+....++ .+...+.+ .+..+.++|.|..-.++|.++..+
T Consensus 253 ---h~IDIA~vetG-d~~~eI~~--------~~~t~tVAWHPk~~LLAyA~ddk~ 295 (313)
T KOG1407|consen 253 ---HFIDIAEVETG-DRVWEIPC--------EGPTFTVAWHPKRPLLAYACDDKD 295 (313)
T ss_pred ---ceEEeEecccC-CeEEEeec--------cCCceeEEecCCCceeeEEecCCC
Confidence 22222333331 23334444 345677999999999999988776
No 197
>KOG0279|consensus
Probab=98.50 E-value=0.00042 Score=65.56 Aligned_cols=291 Identities=11% Similarity=0.131 Sum_probs=162.1
Q ss_pred CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEee
Q psy463 10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCS 89 (790)
Q Consensus 10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~ 89 (790)
..+.+..|++..|.+.+.++...-+|.+..+..+ -....+..+.+.+.+..+.-++|+...+-.++ ...++++|
T Consensus 18 Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~---~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw---D~~lrlWD 91 (315)
T KOG0279|consen 18 VTALAIKIKNSDILVSASRDKTIIVWKLTSDDIK---YGVPVRRLTGHSHFVSDVVLSSDGNFALSASW---DGTLRLWD 91 (315)
T ss_pred EEEEEeecCCCceEEEcccceEEEEEEeccCccc---cCceeeeeeccceEecceEEccCCceEEeccc---cceEEEEE
Confidence 3567788888889888887776666666554221 01122233445555555554445443333332 23567888
Q ss_pred CCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccc-
Q psy463 90 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR- 168 (790)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~- 168 (790)
..+|+++..+..+.... ...+||||.++|+--++ -+-|-+++.-++- ...++.+.
T Consensus 92 l~~g~~t~~f~GH~~dV-----lsva~s~dn~qivSGSr-------------DkTiklwnt~g~c------k~t~~~~~~ 147 (315)
T KOG0279|consen 92 LATGESTRRFVGHTKDV-----LSVAFSTDNRQIVSGSR-------------DKTIKLWNTLGVC------KYTIHEDSH 147 (315)
T ss_pred ecCCcEEEEEEecCCce-----EEEEecCCCceeecCCC-------------cceeeeeeecccE------EEEEecCCC
Confidence 88888777666543221 23488999999874221 1245555543331 22233332
Q ss_pred eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCE
Q psy463 169 FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPV 248 (790)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~ 248 (790)
.+...-..|.|...+ -++++.... ..+-+.|+++-+. ....- ...++
T Consensus 148 ~~WVscvrfsP~~~~-p~Ivs~s~D----------ktvKvWnl~~~~l-----~~~~~-----------------gh~~~ 194 (315)
T KOG0279|consen 148 REWVSCVRFSPNESN-PIIVSASWD----------KTVKVWNLRNCQL-----RTTFI-----------------GHSGY 194 (315)
T ss_pred cCcEEEEEEcCCCCC-cEEEEccCC----------ceEEEEccCCcch-----hhccc-----------------ccccc
Confidence 455555677777644 333433211 2444556665331 11111 56789
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD 328 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~ 328 (790)
+..+..||||.+.+.- +....+++.|++.+++ +...+. .....+..|||+.-+|. .+. +
T Consensus 195 v~t~~vSpDGslcasG---gkdg~~~LwdL~~~k~--lysl~a----~~~v~sl~fspnrywL~-~at------~----- 253 (315)
T KOG0279|consen 195 VNTVTVSPDGSLCASG---GKDGEAMLWDLNEGKN--LYSLEA----FDIVNSLCFSPNRYWLC-AAT------A----- 253 (315)
T ss_pred EEEEEECCCCCEEecC---CCCceEEEEEccCCce--eEeccC----CCeEeeEEecCCceeEe-ecc------C-----
Confidence 9999999999977663 3344599999988866 333221 12356899999976665 222 2
Q ss_pred cccEEEEEEcCCCCcccCCCcccccC---CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEE
Q psy463 329 SWDHLTFIDLDDQAGIKDKVPVPLTR---GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRI 389 (790)
Q Consensus 329 ~~~~l~~~d~~~~~~~~~~~~~~lt~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 389 (790)
.-|-++|++++..+....+..... .....--.++|++||.+|+-.-.++. .++|.+
T Consensus 254 --~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~---irv~qv 312 (315)
T KOG0279|consen 254 --TSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNV---IRVWQV 312 (315)
T ss_pred --CceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCc---EEEEEe
Confidence 237788888775211111111111 00111123899999998876655533 455544
No 198
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.49 E-value=4.1e-07 Score=85.19 Aligned_cols=117 Identities=21% Similarity=0.200 Sum_probs=81.3
Q ss_pred EEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccc
Q psy463 484 QVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVE 563 (790)
Q Consensus 484 ~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~ 563 (790)
...++.|. ..+.||+|+++||..-. ..|....... .++.||+|++|+.-.... .-+..+
T Consensus 34 pLlI~tP~-----~~G~yPVilF~HG~~l~----ns~Ys~lL~H-IASHGfIVVAPQl~~~~~-----------p~~~~E 92 (307)
T PF07224_consen 34 PLLIVTPS-----EAGTYPVILFLHGFNLY----NSFYSQLLAH-IASHGFIVVAPQLYTLFP-----------PDGQDE 92 (307)
T ss_pred CeEEecCC-----cCCCccEEEEeechhhh----hHHHHHHHHH-HhhcCeEEEechhhcccC-----------CCchHH
Confidence 34555666 46789999999997543 2222223333 345999999999764211 112356
Q ss_pred hhHHHHHHHHHHHhC----C---CcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCCCC
Q psy463 564 IYDQINVTRYLQENL----P---YIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPVTD 621 (790)
Q Consensus 564 ~~D~~~~~~~l~~~~----~---~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~~~ 621 (790)
+++....++|+.+.+ + ..+..+++++|||.||..|..+|..+. +-.|.++|.+.|+..
T Consensus 93 i~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 93 IKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred HHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 788888899987642 1 246789999999999999999998763 335778888888754
No 199
>KOG2055|consensus
Probab=98.49 E-value=6.6e-06 Score=82.60 Aligned_cols=189 Identities=15% Similarity=0.106 Sum_probs=117.5
Q ss_pred cceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCc
Q psy463 203 WDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGT 282 (790)
Q Consensus 203 ~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~ 282 (790)
+..+|.+|+++++..++..+.. .....+..+..|||+++++...+.+ .|+++...+++
T Consensus 279 rky~ysyDle~ak~~k~~~~~g-------------------~e~~~~e~FeVShd~~fia~~G~~G---~I~lLhakT~e 336 (514)
T KOG2055|consen 279 RKYLYSYDLETAKVTKLKPPYG-------------------VEEKSMERFEVSHDSNFIAIAGNNG---HIHLLHAKTKE 336 (514)
T ss_pred ceEEEEeeccccccccccCCCC-------------------cccchhheeEecCCCCeEEEcccCc---eEEeehhhhhh
Confidence 4789999999987655532211 1234567889999999777665433 39999888887
Q ss_pred eeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEE
Q psy463 283 CDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI 362 (790)
Q Consensus 283 ~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~ 362 (790)
.-.-+..++ ....+.||.||+.|+. .+ .+| ++|++|+.... .....+.........
T Consensus 337 li~s~KieG------~v~~~~fsSdsk~l~~-~~----~~G--------eV~v~nl~~~~-----~~~rf~D~G~v~gts 392 (514)
T KOG2055|consen 337 LITSFKIEG------VVSDFTFSSDSKELLA-SG----GTG--------EVYVWNLRQNS-----CLHRFVDDGSVHGTS 392 (514)
T ss_pred hhheeeecc------EEeeEEEecCCcEEEE-Ec----CCc--------eEEEEecCCcc-----eEEEEeecCccceee
Confidence 644444332 2568999999998873 33 345 89999998765 233333322112223
Q ss_pred EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEE
Q psy463 363 LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLF 442 (790)
Q Consensus 363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~ 442 (790)
++.|++|.+++.-+..|- .+||..+-.-....++++.. +..+ ...+.+..|++|++.++.. +......+.++
T Consensus 393 ~~~S~ng~ylA~GS~~Gi---VNIYd~~s~~~s~~PkPik~-~dNL---tt~Itsl~Fn~d~qiLAia-S~~~knalrLV 464 (514)
T KOG2055|consen 393 LCISLNGSYLATGSDSGI---VNIYDGNSCFASTNPKPIKT-VDNL---TTAITSLQFNHDAQILAIA-SRVKKNALRLV 464 (514)
T ss_pred eeecCCCceEEeccCcce---EEEeccchhhccCCCCchhh-hhhh---heeeeeeeeCcchhhhhhh-hhccccceEEE
Confidence 778899996666555544 77887543211245555543 1111 2367889999999977554 33334556665
Q ss_pred ecC
Q psy463 443 DKT 445 (790)
Q Consensus 443 ~~~ 445 (790)
.+-
T Consensus 465 HvP 467 (514)
T KOG2055|consen 465 HVP 467 (514)
T ss_pred ecc
Confidence 543
No 200
>COG0627 Predicted esterase [General function prediction only]
Probab=98.49 E-value=2.1e-06 Score=86.57 Aligned_cols=230 Identities=14% Similarity=0.091 Sum_probs=126.8
Q ss_pred CCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCC--------------CCCCChhhhHhhhhc--cCC
Q psy463 497 GHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGR--------------NSALKGNTLKYAGYR--RLG 560 (790)
Q Consensus 497 ~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~r--------------G~~~~g~~~~~~~~~--~~~ 560 (790)
..++.|+++++||..+.. ..-+...-........|++++++|-. |.+ .|.. .+.... ..+
T Consensus 50 m~~~ipV~~~l~G~t~~~--~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~-~sfY-~d~~~~~~~~~ 125 (316)
T COG0627 50 MGRDIPVLYLLSGLTCNE--PNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGG-ASFY-SDWTQPPWASG 125 (316)
T ss_pred cCCCCCEEEEeCCCCCCC--CceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCc-ccee-cccccCccccC
Confidence 357789999999976652 11122223344455578888887422 211 1110 011111 111
Q ss_pred ccchhHHHH--HHHHHHHhCCCcCC--CceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccc-----------
Q psy463 561 TVEIYDQIN--VTRYLQENLPYIDK--TRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYY----------- 625 (790)
Q Consensus 561 ~~~~~D~~~--~~~~l~~~~~~~d~--~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~----------- 625 (790)
...+++++. .-..+.+..+ ++. .+.+|+||||||+-|+.+|.++| ++|+.+.+.+|+.+....
T Consensus 126 ~~q~~tfl~~ELP~~~~~~f~-~~~~~~~~aI~G~SMGG~GAl~lA~~~p-d~f~~~sS~Sg~~~~s~~~~~~~~~~~~~ 203 (316)
T COG0627 126 PYQWETFLTQELPALWEAAFP-ADGTGDGRAIAGHSMGGYGALKLALKHP-DRFKSASSFSGILSPSSPWGPTLAMGDPW 203 (316)
T ss_pred ccchhHHHHhhhhHHHHHhcC-cccccCCceeEEEeccchhhhhhhhhCc-chhceeccccccccccccccccccccccc
Confidence 123333321 1112222233 444 38999999999999999999998 599999999998775411
Q ss_pred cccchhhhcCCCCccCchhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcC
Q psy463 626 DTIYSERYMGLPTFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFE 705 (790)
Q Consensus 626 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 705 (790)
.....+.++|... ...+...++...++++ ....-
T Consensus 204 g~~~~~~~~G~~~----~~~w~~~D~~~~~~~l----------------------------~~~~~-------------- 237 (316)
T COG0627 204 GGKAFNAMLGPDS----DPAWQENDPLSLIEKL----------------------------VANAN-------------- 237 (316)
T ss_pred cCccHHHhcCCCc----cccccccCchhHHHHh----------------------------hhccc--------------
Confidence 1111122222210 0011111111111111 00000
Q ss_pred CcchhhhhhhhhhhhhccCCccEEEEecCCCcccc--hhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHH
Q psy463 706 DNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH--FQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLER 783 (790)
Q Consensus 706 ~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~--~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~ 783 (790)
..+... ... ..++++-+|..|.... ....+.+.+++..+|.+..+...++..|... .....+..+..
T Consensus 238 --------~~~~~~-~~~-~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~-~w~~~l~~~~~ 306 (316)
T COG0627 238 --------TRIWVY-GGS-PPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWY-FWASQLADHLP 306 (316)
T ss_pred --------ccceec-ccC-CCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHH-HHHHHHHHHHH
Confidence 000011 112 5778888899997764 3447889999999999999888888889776 46677778888
Q ss_pred HHHHhh
Q psy463 784 FLDSCF 789 (790)
Q Consensus 784 fl~~~l 789 (790)
|+...|
T Consensus 307 ~~a~~l 312 (316)
T COG0627 307 WLAGAL 312 (316)
T ss_pred HHHHHh
Confidence 887665
No 201
>KOG2315|consensus
Probab=98.48 E-value=0.00016 Score=75.02 Aligned_cols=164 Identities=11% Similarity=0.198 Sum_probs=100.2
Q ss_pred EEEEEEccCCc-EEE--EEeccC------cceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc
Q psy463 249 LSRVNWANESV-VAA--WVNRVQ------NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ 319 (790)
Q Consensus 249 ~~~~~wspDg~-~~~--~~~r~~------~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~ 319 (790)
-....|.+-|. ++. .++-+. +...||.++.++..+..-.... ++.++..|||+|+.++++...
T Consensus 220 kvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~------GPVhdv~W~~s~~EF~VvyGf-- 291 (566)
T KOG2315|consen 220 KVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKE------GPVHDVTWSPSGREFAVVYGF-- 291 (566)
T ss_pred eeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCC------CCceEEEECCCCCEEEEEEec--
Confidence 35788999998 333 232221 2357999998844443222222 247799999999999865541
Q ss_pred ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc
Q psy463 320 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE 399 (790)
Q Consensus 320 ~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 399 (790)
- -..+-++|+.+.- .-.+..+.. .-+-|+|-|+.|++.+-..-++...+|-+. . .+
T Consensus 292 ---M------PAkvtifnlr~~~------v~df~egpR---N~~~fnp~g~ii~lAGFGNL~G~mEvwDv~--n----~K 347 (566)
T KOG2315|consen 292 ---M------PAKVTIFNLRGKP------VFDFPEGPR---NTAFFNPHGNIILLAGFGNLPGDMEVWDVP--N----RK 347 (566)
T ss_pred ---c------cceEEEEcCCCCE------eEeCCCCCc---cceEECCCCCEEEEeecCCCCCceEEEecc--c----hh
Confidence 1 2356677776653 333433332 226699999988888776444446666442 2 34
Q ss_pred eeeecccccCCCcccEEEEEEecCCcEEEEEeecCC---CCeEEEEecCCCeEE
Q psy463 400 CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG---IPEIMLFDKTGQRLL 450 (790)
Q Consensus 400 ~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~---~~~i~~~~~~~~~~~ 450 (790)
+|+.. ...+.....|+|||++++.....+- ...+.+++..|..+.
T Consensus 348 ~i~~~------~a~~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~l~ 395 (566)
T KOG2315|consen 348 LIAKF------KAANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSLLH 395 (566)
T ss_pred hcccc------ccCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCceee
Confidence 55542 2223455789999999988766654 445677777665444
No 202
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.46 E-value=9.8e-07 Score=91.27 Aligned_cols=129 Identities=19% Similarity=0.250 Sum_probs=83.4
Q ss_pred EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCC-eEEEEEcCCCCCCChhh-hHhhh--hcc
Q psy463 483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKD-IVVAYIDGRNSALKGNT-LKYAG--YRR 558 (790)
Q Consensus 483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G-~~v~~~d~rG~~~~g~~-~~~~~--~~~ 558 (790)
+...++.|.. +.++.||||++|||..... ......+....++++| ++|+.+|||-.. .|.- +.... ...
T Consensus 80 L~LNIwaP~~----~a~~~PVmV~IHGG~y~~G--s~s~~~ydgs~La~~g~vVvVSvNYRLG~-lGfL~~~~~~~~~~~ 152 (491)
T COG2272 80 LYLNIWAPEV----PAEKLPVMVYIHGGGYIMG--SGSEPLYDGSALAARGDVVVVSVNYRLGA-LGFLDLSSLDTEDAF 152 (491)
T ss_pred eeEEeeccCC----CCCCCcEEEEEeccccccC--CCcccccChHHHHhcCCEEEEEeCccccc-ceeeehhhccccccc
Confidence 5556777872 4667899999999886532 2222223344555577 999999999422 1211 10100 111
Q ss_pred CCccchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCCC--CceEEEEEeCCCC
Q psy463 559 LGTVEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDPS--NVFKCGISVAPVT 620 (790)
Q Consensus 559 ~~~~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~~v~~~~~~ 620 (790)
-...-+.|++.+++|+.++ +| -|++.|.|+|.|.|++.++.++. .|. ..|..+|+.+|..
T Consensus 153 ~~n~Gl~DqilALkWV~~NIe~FG-GDp~NVTl~GeSAGa~si~~Lla-~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 153 ASNLGLLDQILALKWVRDNIEAFG-GDPQNVTLFGESAGAASILTLLA-VPSAKGLFHRAIALSGAA 217 (491)
T ss_pred cccccHHHHHHHHHHHHHHHHHhC-CCccceEEeeccchHHHHHHhhc-CccchHHHHHHHHhCCCC
Confidence 1114588999999999765 55 79999999999999998887766 342 3566666666544
No 203
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.45 E-value=0.00022 Score=71.19 Aligned_cols=233 Identities=13% Similarity=0.073 Sum_probs=125.2
Q ss_pred ccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463 113 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ 192 (790)
Q Consensus 113 ~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (790)
.|.|.++...|+|+.-... .|++++.+++. ...+.... ..-+..+.+++ .+|+...
T Consensus 4 gp~~d~~~g~l~~~D~~~~------------~i~~~~~~~~~------~~~~~~~~---~~G~~~~~~~g--~l~v~~~- 59 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGG------------RIYRVDPDTGE------VEVIDLPG---PNGMAFDRPDG--RLYVADS- 59 (246)
T ss_dssp EEEEETTTTEEEEEETTTT------------EEEEEETTTTE------EEEEESSS---EEEEEEECTTS--EEEEEET-
T ss_pred ceEEECCCCEEEEEEcCCC------------EEEEEECCCCe------EEEEecCC---CceEEEEccCC--EEEEEEc-
Confidence 5789997778888764332 89999998874 22222222 22233442223 3344332
Q ss_pred CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccC--c
Q psy463 193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQ--N 269 (790)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~--~ 269 (790)
..+.++|+++++.+.+ .. .+...........+.+.|||+ ++.-..... .
T Consensus 60 -----------~~~~~~d~~~g~~~~~------~~-----------~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~ 111 (246)
T PF08450_consen 60 -----------GGIAVVDPDTGKVTVL------AD-----------LPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASG 111 (246)
T ss_dssp -----------TCEEEEETTTTEEEEE------EE-----------EETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTC
T ss_pred -----------CceEEEecCCCcEEEE------ee-----------ccCCCcccCCCceEEEcCCCCEEEEecCCCcccc
Confidence 4566668877753222 10 000001345567899999999 443333222 1
Q ss_pred c--eEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCc-ccC
Q psy463 270 R--ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAG-IKD 346 (790)
Q Consensus 270 ~--~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~-~~~ 346 (790)
. ..||+++.. ++.+.+...-. ....+.|||||+.|++.-+ . ...|+.++++.... ..+
T Consensus 112 ~~~g~v~~~~~~-~~~~~~~~~~~------~pNGi~~s~dg~~lyv~ds------~------~~~i~~~~~~~~~~~~~~ 172 (246)
T PF08450_consen 112 IDPGSVYRIDPD-GKVTVVADGLG------FPNGIAFSPDGKTLYVADS------F------NGRIWRFDLDADGGELSN 172 (246)
T ss_dssp GGSEEEEEEETT-SEEEEEEEEES------SEEEEEEETTSSEEEEEET------T------TTEEEEEEEETTTCCEEE
T ss_pred ccccceEEECCC-CeEEEEecCcc------cccceEECCcchheeeccc------c------cceeEEEeccccccceee
Confidence 2 569999998 77766655422 1347999999998885443 2 34699998863220 000
Q ss_pred C-CcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEe-cCC
Q psy463 347 K-VPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFS-TNV 424 (790)
Q Consensus 347 ~-~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s-~dg 424 (790)
. ....+........+ ++.+.+|+ ||.....+ ..|++++.++ .....+.. ......+..|. +|.
T Consensus 173 ~~~~~~~~~~~g~pDG-~~vD~~G~-l~va~~~~----~~I~~~~p~G--~~~~~i~~-------p~~~~t~~~fgg~~~ 237 (246)
T PF08450_consen 173 RRVFIDFPGGPGYPDG-LAVDSDGN-LWVADWGG----GRIVVFDPDG--KLLREIEL-------PVPRPTNCAFGGPDG 237 (246)
T ss_dssp EEEEEE-SSSSCEEEE-EEEBTTS--EEEEEETT----TEEEEEETTS--CEEEEEE--------SSSSEEEEEEESTTS
T ss_pred eeeEEEcCCCCcCCCc-ceEcCCCC-EEEEEcCC----CEEEEECCCc--cEEEEEcC-------CCCCEEEEEEECCCC
Confidence 0 01112222212233 77888886 65554433 4788888875 22333332 22256677784 666
Q ss_pred cEEEEEe
Q psy463 425 SYYVLSC 431 (790)
Q Consensus 425 ~~~~~~~ 431 (790)
+.|+.+.
T Consensus 238 ~~L~vTt 244 (246)
T PF08450_consen 238 KTLYVTT 244 (246)
T ss_dssp SEEEEEE
T ss_pred CEEEEEe
Confidence 7665553
No 204
>KOG2281|consensus
Probab=98.45 E-value=9.6e-05 Score=77.96 Aligned_cols=192 Identities=19% Similarity=0.266 Sum_probs=107.8
Q ss_pred ecCCceeEeCCCC----CceEEEEecCCce---------------eEEEecccCCCCCCCcCCC----------------
Q psy463 7 LSSSSALWFSPSG----NNLAYASFDDNRT---------------VIMTIPFYGNPGHPSSQYT---------------- 51 (790)
Q Consensus 7 ~~~~~~~~wSPDG----~~iaf~~~~~~~~---------------~~~~~~~~g~~~~~~~~~~---------------- 51 (790)
|.+-...||||-. .+|+|.-.++..+ +-|.+|..|.+|.++....
T Consensus 264 fdR~~GyWW~p~s~~~~~rIlYeeVdesev~V~h~~s~~~~~~~~d~~rYPrtGt~Nak~~Lkmv~~~~~~~gk~~~v~~ 343 (867)
T KOG2281|consen 264 FDRFEGYWWSPPSGLKILRILYEEVDESEVEVIHVPSPVLGDRRVDSYRYPRTGTKNAKSTLKMVEFENDAEGKIYDVPL 343 (867)
T ss_pred HHhhcceeecCCCCCceEEEEeeecChhheEEEeccCcccCCCccccccCCcCCCCCceeeEEEEEEeeccccceeccch
Confidence 6666789999733 4577765554434 4456677777766542110
Q ss_pred ----cccc-CC--CCccccccCCCcceeE--eeeecccceeEEEEeeCCCCee--------------------eEEEeec
Q psy463 52 ----QAIN-LR--EPVLSRVNWANESVVA--AWVNRVQNRARITRCSINEGTC--------------------DVVFSRD 102 (790)
Q Consensus 52 ----~~~~-~~--~~~~~~~~w~~~~~~~--~~~~r~~~~~~~~~~~~~~~~~--------------------~~~~~~~ 102 (790)
.+.. +. -.++.+++|.+|++.+ +-++|.|....+-+...+.+-. -.+...+
T Consensus 344 kdlv~~~~~~f~~~EYI~Ragwtpdgkyvwvq~LdR~Q~~l~iilip~~~f~~~~dn~~~~~~~~~~v~~~~~~~viyee 423 (867)
T KOG2281|consen 344 KDLVQPFHCLFEDVEYIARAGWTPDGKYVWVQVLDRSQQRLQIILIPPTLFIPKEDNLQLRTDLNMGVPDDVSPEVIYEE 423 (867)
T ss_pred hhcccccccccccceeeeeccccCCCcEEEEEEecCCcceeEEEEECHHHcCCccccHhhhhhhhhcCCcCCCcceEEec
Confidence 0001 11 1456788999999855 7789999888886664443322 1233334
Q ss_pred CCCCccccCC--cccc-cc-CCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcC----------Cc------cCCcce
Q psy463 103 LDRGWFEPFD--HLRF-SS-DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQA----------GI------KDKVPV 162 (790)
Q Consensus 103 ~~~~~~~~~~--~~~~-sp-dg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~----------~~------~~~~~~ 162 (790)
...+|+...+ .|-+ ++ .+..-+.+.+...+ ++|+|++....+. +. ..+...
T Consensus 424 ~sd~winiHd~f~~~~~~~~e~~~~fi~asE~~~---------Frhly~its~lk~ng~~~s~~~~p~~~d~~c~i~ee~ 494 (867)
T KOG2281|consen 424 PSDGWINIHDIFHPLPQSTHEASYPFIWASEETG---------FRHLYLITSLLKPNGYCLSLGSAPLDQDFKCRIKEEI 494 (867)
T ss_pred CCCceEEhhhcccccccCCccceeeEEEeccccc---------ceEEEEEEeecccCCCcccccCCcccccccCcchhhe
Confidence 5567886532 2322 22 22222222322211 6799998643311 00 011245
Q ss_pred eccccceEEEEEEe--eeccCCccEEEEecccCCCCCCCccccceeEEEecC-Ccc
Q psy463 163 PLTRGRFTVTEILA--WDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLD-DQA 215 (790)
Q Consensus 163 ~lt~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 215 (790)
.||.|+|+|....+ .|...+ ++|+..+...+ -..|||++.++ .|+
T Consensus 495 altSgeweVl~r~Gi~VdE~~~--LVYf~gt~d~P------lE~hLyvvsye~~g~ 542 (867)
T KOG2281|consen 495 ALTSGEWEVLARHGIWVDEVRK--LVYFVGTKDTP------LEHHLYVVSYENPGE 542 (867)
T ss_pred eecccceeehhhcCeeecccce--EEEEEccCCCC------ceeeEEEEEEecCCc
Confidence 67999999998875 455544 55554433322 22699999998 566
No 205
>KOG2551|consensus
Probab=98.44 E-value=5.9e-06 Score=75.93 Aligned_cols=62 Identities=21% Similarity=0.312 Sum_probs=50.2
Q ss_pred hccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHhh
Q psy463 721 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSCF 789 (790)
Q Consensus 721 ~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~l 789 (790)
..+ ++|.|-+.|+.|.++|...+..|++.+.++ ..+.-|| ||.+.. ...+.+.|.+||...+
T Consensus 160 ~~i-~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a----~vl~Hpg-gH~VP~-~~~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 160 RPL-STPSLHIFGETDTIVPSERSEQLAESFKDA----TVLEHPG-GHIVPN-KAKYKEKIADFIQSFL 221 (230)
T ss_pred cCC-CCCeeEEecccceeecchHHHHHHHhcCCC----eEEecCC-CccCCC-chHHHHHHHHHHHHHH
Confidence 345 899999999999999999999999998876 4455554 999885 4477788888887643
No 206
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.44 E-value=1.4e-06 Score=91.76 Aligned_cols=113 Identities=15% Similarity=0.118 Sum_probs=74.8
Q ss_pred CccEEEEEcCCCCccccccccccchHHHHHhc-CCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhC
Q psy463 500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADN-KDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENL 578 (790)
Q Consensus 500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~-~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 578 (790)
..|++|++||...... ...|...+...++.. ..+.|+++|.+|.+..... .+. ..-.....++.+.+++|.+..
T Consensus 40 ~~ptvIlIHG~~~s~~-~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~--~a~--~~t~~vg~~la~lI~~L~~~~ 114 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGM-FESWVPKLVAALYEREPSANVIVVDWLSRAQQHYP--TSA--AYTKLVGKDVAKFVNWMQEEF 114 (442)
T ss_pred CCCeEEEECCCCcCCc-chhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCc--ccc--ccHHHHHHHHHHHHHHHHHhh
Confidence 3578999999876421 233443344444432 3699999999987643211 111 000122356667777776534
Q ss_pred CCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463 579 PYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV 619 (790)
Q Consensus 579 ~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~ 619 (790)
+ ++.+++.|+||||||.+|..++.+.|. ++..++++.|.
T Consensus 115 g-l~l~~VhLIGHSLGAhIAg~ag~~~p~-rV~rItgLDPA 153 (442)
T TIGR03230 115 N-YPWDNVHLLGYSLGAHVAGIAGSLTKH-KVNRITGLDPA 153 (442)
T ss_pred C-CCCCcEEEEEECHHHHHHHHHHHhCCc-ceeEEEEEcCC
Confidence 4 567899999999999999999987774 78888888775
No 207
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.43 E-value=4.7e-07 Score=102.37 Aligned_cols=132 Identities=22% Similarity=0.265 Sum_probs=82.3
Q ss_pred EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCcc
Q psy463 483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTV 562 (790)
Q Consensus 483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~ 562 (790)
+..-++.|.... ...++||||++|||....... .........+++..+++||.++||-.. .|.-.........+..
T Consensus 109 L~LnI~~P~~~~--~~~~lPV~v~ihGG~f~~G~~-~~~~~~~~~~~~~~~vivVt~nYRlg~-~Gfl~~~~~~~~~gN~ 184 (535)
T PF00135_consen 109 LYLNIYTPSNAS--SNSKLPVMVWIHGGGFMFGSG-SFPPYDGASLAASKDVIVVTINYRLGA-FGFLSLGDLDAPSGNY 184 (535)
T ss_dssp -EEEEEEETSSS--STTSEEEEEEE--STTTSSCT-TSGGGHTHHHHHHHTSEEEEE----HH-HHH-BSSSTTSHBSTH
T ss_pred HHHhhhhccccc--cccccceEEEeecccccCCCc-ccccccccccccCCCEEEEEecccccc-cccccccccccCchhh
Confidence 566788898755 344799999999998764422 112223345566689999999999421 2211000000002345
Q ss_pred chhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCC
Q psy463 563 EIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPV 619 (790)
Q Consensus 563 ~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~ 619 (790)
.+.|+..+++|+.++ +| -|+++|.|+|+|.||..+...+..-. ...|..+|+.+|.
T Consensus 185 Gl~Dq~~AL~WV~~nI~~FG-GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 185 GLLDQRLALKWVQDNIAAFG-GDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHHHHHHHGGGGT-EEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hhhhhHHHHHHHHhhhhhcc-cCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 688999999999876 44 68999999999999998877665421 3589999988884
No 208
>KOG0279|consensus
Probab=98.41 E-value=0.00019 Score=67.80 Aligned_cols=181 Identities=11% Similarity=0.092 Sum_probs=110.7
Q ss_pred ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463 204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC 283 (790)
Q Consensus 204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~ 283 (790)
..|.+.|+++|+. .+++- ....-+..+++|||.+.+..-+|+.. |-+++..++-.
T Consensus 85 ~~lrlWDl~~g~~-----t~~f~-----------------GH~~dVlsva~s~dn~qivSGSrDkT---iklwnt~g~ck 139 (315)
T KOG0279|consen 85 GTLRLWDLATGES-----TRRFV-----------------GHTKDVLSVAFSTDNRQIVSGSRDKT---IKLWNTLGVCK 139 (315)
T ss_pred ceEEEEEecCCcE-----EEEEE-----------------ecCCceEEEEecCCCceeecCCCcce---eeeeeecccEE
Confidence 5778889999874 22332 45566789999999997666666543 77777665544
Q ss_pred eEEEEEeCCCcccccCCceeEccCCCEEEE-EEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEE
Q psy463 284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLL-ILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI 362 (790)
Q Consensus 284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~-~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~ 362 (790)
-.+.... .+.|+. ...|||+....++ .++ .++ .+-++|+++-+ .+.--.+.-.....
T Consensus 140 ~t~~~~~-~~~WVs---cvrfsP~~~~p~Ivs~s----~Dk--------tvKvWnl~~~~------l~~~~~gh~~~v~t 197 (315)
T KOG0279|consen 140 YTIHEDS-HREWVS---CVRFSPNESNPIIVSAS----WDK--------TVKVWNLRNCQ------LRTTFIGHSGYVNT 197 (315)
T ss_pred EEEecCC-CcCcEE---EEEEcCCCCCcEEEEcc----CCc--------eEEEEccCCcc------hhhccccccccEEE
Confidence 4444332 266764 7899999644332 344 444 57888987655 33321222222234
Q ss_pred EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEE
Q psy463 363 LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLF 442 (790)
Q Consensus 363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~ 442 (790)
..+||||...+.-..+ ..++..+++. ++ .+-+-+ ....+.+..|||+.-+++... .+.|.+.
T Consensus 198 ~~vSpDGslcasGgkd-----g~~~LwdL~~--~k-~lysl~------a~~~v~sl~fspnrywL~~at----~~sIkIw 259 (315)
T KOG0279|consen 198 VTVSPDGSLCASGGKD-----GEAMLWDLNE--GK-NLYSLE------AFDIVNSLCFSPNRYWLCAAT----ATSIKIW 259 (315)
T ss_pred EEECCCCCEEecCCCC-----ceEEEEEccC--Cc-eeEecc------CCCeEeeEEecCCceeEeecc----CCceEEE
Confidence 7899999966552222 5777777765 22 122221 445778899999876665432 3348888
Q ss_pred ecCCCeE
Q psy463 443 DKTGQRL 449 (790)
Q Consensus 443 ~~~~~~~ 449 (790)
+++++..
T Consensus 260 dl~~~~~ 266 (315)
T KOG0279|consen 260 DLESKAV 266 (315)
T ss_pred eccchhh
Confidence 8877543
No 209
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.41 E-value=0.00063 Score=67.88 Aligned_cols=230 Identities=13% Similarity=0.143 Sum_probs=127.5
Q ss_pred EeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEE
Q psy463 175 LAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNW 254 (790)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~w 254 (790)
..|+++.+. +||+... ...||+++.++++... +. ... ......
T Consensus 5 p~~d~~~g~-l~~~D~~-----------~~~i~~~~~~~~~~~~------~~------------------~~~-~~G~~~ 47 (246)
T PF08450_consen 5 PVWDPRDGR-LYWVDIP-----------GGRIYRVDPDTGEVEV------ID------------------LPG-PNGMAF 47 (246)
T ss_dssp EEEETTTTE-EEEEETT-----------TTEEEEEETTTTEEEE------EE------------------SSS-EEEEEE
T ss_pred eEEECCCCE-EEEEEcC-----------CCEEEEEECCCCeEEE------Ee------------------cCC-CceEEE
Confidence 467765543 5555331 2689999998875311 11 111 233444
Q ss_pred c-cCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCC-cccccCCceeEccCCCEEEEEEccccccCCCCCcCcc--
Q psy463 255 A-NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDR-GWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW-- 330 (790)
Q Consensus 255 s-pDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~-~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~-- 330 (790)
. +||+++...... +.++|.++++.+.+....... ... ...+.++.|||+ |++..+....... .
T Consensus 48 ~~~~g~l~v~~~~~-----~~~~d~~~g~~~~~~~~~~~~~~~~-~~ND~~vd~~G~-ly~t~~~~~~~~~------~~~ 114 (246)
T PF08450_consen 48 DRPDGRLYVADSGG-----IAVVDPDTGKVTVLADLPDGGVPFN-RPNDVAVDPDGN-LYVTDSGGGGASG------IDP 114 (246)
T ss_dssp ECTTSEEEEEETTC-----EEEEETTTTEEEEEEEEETTCSCTE-EEEEEEE-TTS--EEEEEECCBCTTC------GGS
T ss_pred EccCCEEEEEEcCc-----eEEEecCCCcEEEEeeccCCCcccC-CCceEEEcCCCC-EEEEecCCCcccc------ccc
Confidence 4 787754444332 666699999888887764222 222 234789999998 7655541110111 1
Q ss_pred cEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc---ceeeecccc
Q psy463 331 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP---ECITCDLLT 407 (790)
Q Consensus 331 ~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~---~~lt~~~~~ 407 (790)
..||+++.+ ++ ...+..+ .....-++|+||++.||+..... ..|++++++....+. +.+..
T Consensus 115 g~v~~~~~~-~~------~~~~~~~-~~~pNGi~~s~dg~~lyv~ds~~----~~i~~~~~~~~~~~~~~~~~~~~---- 178 (246)
T PF08450_consen 115 GSVYRIDPD-GK------VTVVADG-LGFPNGIAFSPDGKTLYVADSFN----GRIWRFDLDADGGELSNRRVFID---- 178 (246)
T ss_dssp EEEEEEETT-SE------EEEEEEE-ESSEEEEEEETTSSEEEEEETTT----TEEEEEEEETTTCCEEEEEEEEE----
T ss_pred cceEEECCC-Ce------EEEEecC-cccccceEECCcchheeeccccc----ceeEEEeccccccceeeeeeEEE----
Confidence 469999987 54 4444332 22233489999999998876554 468888886421211 12211
Q ss_pred cCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEEEcCCCcEEE
Q psy463 408 SANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPIQPNMEAQ 484 (790)
Q Consensus 408 ~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~ 484 (790)
.....+....+.+..+|..++... ....|++++.+++.+..+... ...+..+.|-.++..+|.
T Consensus 179 ~~~~~g~pDG~~vD~~G~l~va~~---~~~~I~~~~p~G~~~~~i~~p-----------~~~~t~~~fgg~~~~~L~ 241 (246)
T PF08450_consen 179 FPGGPGYPDGLAVDSDGNLWVADW---GGGRIVVFDPDGKLLREIELP-----------VPRPTNCAFGGPDGKTLY 241 (246)
T ss_dssp -SSSSCEEEEEEEBTTS-EEEEEE---TTTEEEEEETTSCEEEEEE-S-----------SSSEEEEEEESTTSSEEE
T ss_pred cCCCCcCCCcceEcCCCCEEEEEc---CCCEEEEECCCccEEEEEcCC-----------CCCEEEEEEECCCCCEEE
Confidence 111223466788999998655443 345688888886555444321 124555666555555554
No 210
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.39 E-value=3.2e-05 Score=78.86 Aligned_cols=171 Identities=18% Similarity=0.148 Sum_probs=93.5
Q ss_pred CCccchhHHHHHHHHHHHhCCCcC-CCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCC
Q psy463 559 LGTVEIYDQINVTRYLQENLPYID-KTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLP 637 (790)
Q Consensus 559 ~~~~~~~D~~~~~~~l~~~~~~~d-~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~ 637 (790)
+|...+.|++.|+.++..+.+... .-++.++|+|+|||+|...+.-.|. .+.+++-.++...... +-.+|..
T Consensus 158 ~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~-~~~~~iDns~~~~p~l------~~I~Gre 230 (403)
T PF11144_consen 158 FGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPW-LFDGVIDNSSYALPPL------RYIFGRE 230 (403)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCcc-ceeEEEecCccccchh------heeeeee
Confidence 333457888899999988766443 2489999999999999999988875 8888887776543210 0001110
Q ss_pred CccCchhhhhhccccchhhhccCCcEEEEeecCCCccC--hhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhh
Q psy463 638 TFEDNLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVH--FQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAA 715 (790)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~--~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (790)
-.-..|....-...-.++.-.-..-.+.+.+...| +..+..+.+.+......
T Consensus 231 ---~~~~~y~~~~~~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL----------------------- 284 (403)
T PF11144_consen 231 ---IDFMKYICSGEFFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHL----------------------- 284 (403)
T ss_pred ---cCcccccccccccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHH-----------------------
Confidence 00000000000000000000000001111111111 11112222221111100
Q ss_pred hhhhhhcc-CCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcC
Q psy463 716 LNNKVDRI-RDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYP 764 (790)
Q Consensus 716 ~~~~~~~i-~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p 764 (790)
....+. +++-.+..|+..|..+|.++-++|++.+++.|.++++..+.
T Consensus 285 --~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIk 332 (403)
T PF11144_consen 285 --KIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIK 332 (403)
T ss_pred --HHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEec
Confidence 111122 25677889999999999999999999999999999999883
No 211
>KOG3847|consensus
Probab=98.36 E-value=4.6e-06 Score=80.02 Aligned_cols=115 Identities=20% Similarity=0.278 Sum_probs=72.8
Q ss_pred CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC-hhhhHhh----h-hccC------------
Q psy463 498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK-GNTLKYA----G-YRRL------------ 559 (790)
Q Consensus 498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~-g~~~~~~----~-~~~~------------ 559 (790)
..++|+|||.||.++...+... +...++ ++||+|.++..|..... ...+... . ...|
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa----~c~~LA-ShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~eke 189 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSA----YCTSLA-SHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKE 189 (399)
T ss_pred CCCccEEEEecccccchhhHHH----HhhhHh-hCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCcee
Confidence 5789999999999887543332 333444 49999999999864321 0000000 0 0000
Q ss_pred -------CccchhHHHHHHHHHHH--------------------hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEE
Q psy463 560 -------GTVEIYDQINVTRYLQE--------------------NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKC 612 (790)
Q Consensus 560 -------~~~~~~D~~~~~~~l~~--------------------~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~ 612 (790)
-...+.++..+++-+.+ ..+.+|..+++|+|||.||..+......+ ..|+|
T Consensus 190 f~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~--t~Frc 267 (399)
T KOG3847|consen 190 FHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH--TDFRC 267 (399)
T ss_pred EEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc--cceee
Confidence 00124555555554422 12357788999999999999999888754 38999
Q ss_pred EEEeCCC
Q psy463 613 GISVAPV 619 (790)
Q Consensus 613 ~v~~~~~ 619 (790)
+|+..++
T Consensus 268 aI~lD~W 274 (399)
T KOG3847|consen 268 AIALDAW 274 (399)
T ss_pred eeeeeee
Confidence 9988774
No 212
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.32 E-value=2.4e-06 Score=82.62 Aligned_cols=46 Identities=22% Similarity=0.123 Sum_probs=32.8
Q ss_pred ccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463 722 RIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG 772 (790)
Q Consensus 722 ~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~ 772 (790)
+| ++|+|-++|.+|..++.+.++.+++.+... .+++..++ ||.+-.
T Consensus 159 ~i-~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~~h~g-GH~vP~ 204 (212)
T PF03959_consen 159 KI-SIPTLHVIGENDPVVPPERSEALAEMFDPD---ARVIEHDG-GHHVPR 204 (212)
T ss_dssp T----EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEEEESS-SSS---
T ss_pred cC-CCCeEEEEeCCCCCcchHHHHHHHHhccCC---cEEEEECC-CCcCcC
Confidence 45 899999999999999999999999998874 47777766 887764
No 213
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.32 E-value=5.4e-05 Score=72.69 Aligned_cols=42 Identities=33% Similarity=0.389 Sum_probs=37.0
Q ss_pred CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCc
Q psy463 580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDW 622 (790)
Q Consensus 580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~ 622 (790)
.+|.++.+|+|||+||.+++.++..+|+ .|.+.++.+|-..|
T Consensus 133 ~~~~~~~~i~GhSlGGLfvl~aLL~~p~-~F~~y~~~SPSlWw 174 (264)
T COG2819 133 RTNSERTAIIGHSLGGLFVLFALLTYPD-CFGRYGLISPSLWW 174 (264)
T ss_pred ccCcccceeeeecchhHHHHHHHhcCcc-hhceeeeecchhhh
Confidence 3788999999999999999999998885 99999999986544
No 214
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.32 E-value=0.00047 Score=78.29 Aligned_cols=53 Identities=26% Similarity=0.337 Sum_probs=48.0
Q ss_pred chhhhhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhc
Q psy463 642 NLEGYKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQS 695 (790)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~ 695 (790)
+...|...+|+.++++++ +|+|++||+.|++|+.+++++++++|+..+...+.
T Consensus 534 ~~~~~~~~sp~~~~~~i~-~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~ 586 (620)
T COG1506 534 DREKYEDRSPIFYADNIK-TPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVEL 586 (620)
T ss_pred ChHHHHhcChhhhhcccC-CCEEEEeecCCccCChHHHHHHHHHHHHcCceEEE
Confidence 577899999999999998 89999999999999999999999999998876333
No 215
>KOG0266|consensus
Probab=98.30 E-value=0.00042 Score=75.66 Aligned_cols=226 Identities=19% Similarity=0.142 Sum_probs=125.7
Q ss_pred cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEc-CCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEeccc
Q psy463 114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDL-DDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQ 192 (790)
Q Consensus 114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~-~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (790)
-.|||||+.++= ...+. .|+++++ +.+. ....+......+ .-..+++++ +.++-.+.
T Consensus 209 ~~fs~d~~~l~s-~s~D~------------tiriwd~~~~~~-----~~~~l~gH~~~v-~~~~f~p~g-~~i~Sgs~-- 266 (456)
T KOG0266|consen 209 VAFSPDGSYLLS-GSDDK------------TLRIWDLKDDGR-----NLKTLKGHSTYV-TSVAFSPDG-NLLVSGSD-- 266 (456)
T ss_pred eEECCCCcEEEE-ecCCc------------eEEEeeccCCCe-----EEEEecCCCCce-EEEEecCCC-CEEEEecC--
Confidence 378999995542 22222 7888887 3332 223333333233 445777777 32332221
Q ss_pred CCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceE
Q psy463 193 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRAR 272 (790)
Q Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~ 272 (790)
...+.+.|+.+++.. ..|. .....+..+.+++||+++.....++ .
T Consensus 267 ----------D~tvriWd~~~~~~~-----~~l~-----------------~hs~~is~~~f~~d~~~l~s~s~d~---~ 311 (456)
T KOG0266|consen 267 ----------DGTVRIWDVRTGECV-----RKLK-----------------GHSDGISGLAFSPDGNLLVSASYDG---T 311 (456)
T ss_pred ----------CCcEEEEeccCCeEE-----Eeee-----------------ccCCceEEEEECCCCCEEEEcCCCc---c
Confidence 146666677776642 2333 4556788999999999555544322 3
Q ss_pred EEEEECCCCcee--EEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcc
Q psy463 273 ITRCSINEGTCD--VVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV 350 (790)
Q Consensus 273 i~~~~~~~g~~~--~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~ 350 (790)
|.++|+.++... .+..... . -. +.....|||+|+.|+ ... .++ ++-++|+..+. ...
T Consensus 312 i~vwd~~~~~~~~~~~~~~~~-~-~~-~~~~~~fsp~~~~ll-~~~----~d~--------~~~~w~l~~~~-----~~~ 370 (456)
T KOG0266|consen 312 IRVWDLETGSKLCLKLLSGAE-N-SA-PVTSVQFSPNGKYLL-SAS----LDR--------TLKLWDLRSGK-----SVG 370 (456)
T ss_pred EEEEECCCCceeeeecccCCC-C-CC-ceeEEEECCCCcEEE-Eec----CCC--------eEEEEEccCCc-----cee
Confidence 999999999833 2222211 1 10 245789999999887 444 233 68888887664 133
Q ss_pred cccCCCeEEeE--EEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCC-cccEEEEEEecCCcEE
Q psy463 351 PLTRGRFTVTE--ILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQ-KCSYSGATFSTNVSYY 427 (790)
Q Consensus 351 ~lt~~~~~~~~--~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~-~~~~~~~~~s~dg~~~ 427 (790)
..+.....+.. .+..+++++.++-...+ ..++..++.+. .....+.. . ...+...++++....+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d-----~~v~~~~~~s~-~~~~~l~~-------h~~~~~~~~~~~~~~~~~ 437 (456)
T KOG0266|consen 371 TYTGHSNLVRCIFSPTLSTGGKLIYSGSED-----GSVYVWDSSSG-GILQRLEG-------HSKAAVSDLSSHPTENLI 437 (456)
T ss_pred eecccCCcceeEecccccCCCCeEEEEeCC-----ceEEEEeCCcc-chhhhhcC-------CCCCceeccccCCCcCee
Confidence 33322221111 12336778766666555 56777777651 22222222 2 3445567777877766
Q ss_pred EEE
Q psy463 428 VLS 430 (790)
Q Consensus 428 ~~~ 430 (790)
+..
T Consensus 438 ~s~ 440 (456)
T KOG0266|consen 438 ASS 440 (456)
T ss_pred eec
Confidence 554
No 216
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.25 E-value=0.00023 Score=74.76 Aligned_cols=186 Identities=12% Similarity=0.154 Sum_probs=104.6
Q ss_pred ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463 204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC 283 (790)
Q Consensus 204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~ 283 (790)
.+|.++|.++.+.. ..+. ........+.+||||++++..+|+. .|.++|+.+++.
T Consensus 16 ~~v~viD~~t~~~~-----~~i~-----------------~~~~~h~~~~~s~Dgr~~yv~~rdg---~vsviD~~~~~~ 70 (369)
T PF02239_consen 16 GSVAVIDGATNKVV-----ARIP-----------------TGGAPHAGLKFSPDGRYLYVANRDG---TVSVIDLATGKV 70 (369)
T ss_dssp TEEEEEETTT-SEE-----EEEE------------------STTEEEEEE-TT-SSEEEEEETTS---EEEEEETTSSSE
T ss_pred CEEEEEECCCCeEE-----EEEc-----------------CCCCceeEEEecCCCCEEEEEcCCC---eEEEEECCcccE
Confidence 69999998886531 2221 1122234577999999877777753 499999999875
Q ss_pred eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCe------
Q psy463 284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF------ 357 (790)
Q Consensus 284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~------ 357 (790)
..-..... . ....++|+||++++. +. ...+ .+.++|.++.+ ..+.+..+..
T Consensus 71 v~~i~~G~-~-----~~~i~~s~DG~~~~v-~n---~~~~--------~v~v~D~~tle-----~v~~I~~~~~~~~~~~ 127 (369)
T PF02239_consen 71 VATIKVGG-N-----PRGIAVSPDGKYVYV-AN---YEPG--------TVSVIDAETLE-----PVKTIPTGGMPVDGPE 127 (369)
T ss_dssp EEEEE-SS-E-----EEEEEE--TTTEEEE-EE---EETT--------EEEEEETTT-------EEEEEE--EE-TTTS-
T ss_pred EEEEecCC-C-----cceEEEcCCCCEEEE-Ee---cCCC--------ceeEecccccc-----ceeecccccccccccC
Confidence 43333221 1 347899999998874 43 2334 78899988766 1233322211
Q ss_pred -EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCC
Q psy463 358 -TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGI 436 (790)
Q Consensus 358 -~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~ 436 (790)
.+.. +.-+|.+...++...+. .+++.++... .+...++.. . -........|+|+++|++......+
T Consensus 128 ~Rv~a-Iv~s~~~~~fVv~lkd~----~~I~vVdy~d--~~~~~~~~i--~---~g~~~~D~~~dpdgry~~va~~~sn- 194 (369)
T PF02239_consen 128 SRVAA-IVASPGRPEFVVNLKDT----GEIWVVDYSD--PKNLKVTTI--K---VGRFPHDGGFDPDGRYFLVAANGSN- 194 (369)
T ss_dssp --EEE-EEE-SSSSEEEEEETTT----TEEEEEETTT--SSCEEEEEE--E-----TTEEEEEE-TTSSEEEEEEGGGT-
T ss_pred CCcee-EEecCCCCEEEEEEccC----CeEEEEEecc--ccccceeee--c---ccccccccccCcccceeeecccccc-
Confidence 1223 33467777666655543 4889998765 222111110 0 1234567899999999877654443
Q ss_pred CeEEEEecCCCeEEE
Q psy463 437 PEIMLFDKTGQRLLY 451 (790)
Q Consensus 437 ~~i~~~~~~~~~~~~ 451 (790)
.+-++|.+++++..
T Consensus 195 -~i~viD~~~~k~v~ 208 (369)
T PF02239_consen 195 -KIAVIDTKTGKLVA 208 (369)
T ss_dssp -EEEEEETTTTEEEE
T ss_pred -eeEEEeeccceEEE
Confidence 78888887765543
No 217
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.25 E-value=9.4e-05 Score=75.49 Aligned_cols=123 Identities=19% Similarity=0.157 Sum_probs=79.1
Q ss_pred EEEEEe-CCCCCCCCCCCccEEEEEcCCCCccccccccccc-h-HHHHHhcCCeEEEEEcCCCCC--CChhhhHhhhhcc
Q psy463 484 QVKLFL-PPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVD-W-NLYLADNKDIVVAYIDGRNSA--LKGNTLKYAGYRR 558 (790)
Q Consensus 484 ~~~~~~-P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~-~-~~~~~~~~G~~v~~~d~rG~~--~~g~~~~~~~~~~ 558 (790)
..|++. |..++ .+.-|+|+++|||+............ . ...++. ..++++.||.-++ ..|..+.
T Consensus 107 s~Wlvk~P~~~~---pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yP------ 175 (374)
T PF10340_consen 107 SYWLVKAPNRFK---PKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYP------ 175 (374)
T ss_pred eEEEEeCCcccC---CCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCc------
Confidence 356776 76543 23459999999998753322221111 1 112333 5589999998654 2233322
Q ss_pred CCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC----CCCceEEEEEeCCCCCcc
Q psy463 559 LGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD----PSNVFKCGISVAPVTDWI 623 (790)
Q Consensus 559 ~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~----p~~~~~~~v~~~~~~~~~ 623 (790)
..+.++.++.+++.+..+ .+.|.++|-|.||.+++.++..- +...-+.+++++|+.+..
T Consensus 176 ---tQL~qlv~~Y~~Lv~~~G---~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 176 ---TQLRQLVATYDYLVESEG---NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred ---hHHHHHHHHHHHHHhccC---CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 447888899999985244 47899999999999998765431 112346899999988765
No 218
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.24 E-value=3.2e-05 Score=83.62 Aligned_cols=137 Identities=18% Similarity=0.121 Sum_probs=82.7
Q ss_pred CcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc-------------cchHHHHHhcCCeEEEEEcC-CCCC
Q psy463 480 NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS-------------VDWNLYLADNKDIVVAYIDG-RNSA 545 (790)
Q Consensus 480 g~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~-------------~~~~~~~~~~~G~~v~~~d~-rG~~ 545 (790)
+..+.+|++...+ .....|+|++++||||.......+. ......-.. +-..++.+|. +|+|
T Consensus 60 ~~~lFyw~~~s~~----~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~-~~~~~l~iDqP~G~G 134 (462)
T PTZ00472 60 DKHYFYWAFGPRN----GNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWN-NEAYVIYVDQPAGVG 134 (462)
T ss_pred CceEEEEEEEcCC----CCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccc-cccCeEEEeCCCCcC
Confidence 5678888887664 3456799999999999754211110 000011111 2245788886 4765
Q ss_pred CChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC---------CCCceEEEEEe
Q psy463 546 LKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD---------PSNVFKCGISV 616 (790)
Q Consensus 546 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~---------p~~~~~~~v~~ 616 (790)
.+-... .....-....++|+..+++.+.++++.....++.|+|+||||..+..++.+- +.-.+++++.+
T Consensus 135 ~S~~~~--~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IG 212 (462)
T PTZ00472 135 FSYADK--ADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVG 212 (462)
T ss_pred cccCCC--CCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEe
Confidence 432110 1111111234677777777666557766678999999999999886665431 11247789999
Q ss_pred CCCCCcc
Q psy463 617 APVTDWI 623 (790)
Q Consensus 617 ~~~~~~~ 623 (790)
.|+++..
T Consensus 213 Ng~~dp~ 219 (462)
T PTZ00472 213 NGLTDPY 219 (462)
T ss_pred ccccChh
Confidence 9987754
No 219
>KOG4497|consensus
Probab=98.23 E-value=0.00018 Score=69.45 Aligned_cols=100 Identities=14% Similarity=0.230 Sum_probs=64.3
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
.+-.+||+|..+++ +.+ + .- .+.||++|+..-+ ....|.. .-.+. .+.|+|.--+++.....
T Consensus 321 ~g~lafs~Ds~y~a-Trn---d-~~------PnalW~Wdlq~l~-----l~avLiQ-k~pir-af~WdP~~prL~vctg~ 382 (447)
T KOG4497|consen 321 AGKLAFSCDSTYAA-TRN---D-KY------PNALWLWDLQNLK-----LHAVLIQ-KHPIR-AFEWDPGRPRLVVCTGK 382 (447)
T ss_pred cceeeecCCceEEe-eec---C-CC------CceEEEEechhhh-----hhhhhhh-cccee-EEEeCCCCceEEEEcCC
Confidence 35678999998777 554 1 22 4579999987654 1222322 22233 37899998888887765
Q ss_pred CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463 379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLS 430 (790)
Q Consensus 379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~ 430 (790)
.+||.-...+ ..++-. +...+.+..+.|.-+|..++.-
T Consensus 383 -----srLY~W~psg----~~~V~v-----P~~GF~i~~l~W~~~g~~i~l~ 420 (447)
T KOG4497|consen 383 -----SRLYFWAPSG----PRVVGV-----PKKGFNIQKLQWLQPGEFIVLC 420 (447)
T ss_pred -----ceEEEEcCCC----ceEEec-----CCCCceeeeEEecCCCcEEEEE
Confidence 6899887765 222221 1244777888898888877654
No 220
>KOG1446|consensus
Probab=98.23 E-value=0.0025 Score=61.66 Aligned_cols=166 Identities=11% Similarity=0.143 Sum_probs=97.5
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
+....+..+.-||-+......+.+. .|.+.|+...+|+-+....+ ..-++|.|.|-.+| ++. +
T Consensus 98 GH~~~V~sL~~sP~~d~FlS~S~D~---tvrLWDlR~~~cqg~l~~~~-------~pi~AfDp~GLifA-~~~------~ 160 (311)
T KOG1446|consen 98 GHKKRVNSLSVSPKDDTFLSSSLDK---TVRLWDLRVKKCQGLLNLSG-------RPIAAFDPEGLIFA-LAN------G 160 (311)
T ss_pred CCCceEEEEEecCCCCeEEecccCC---eEEeeEecCCCCceEEecCC-------CcceeECCCCcEEE-Eec------C
Confidence 4455677888899887444443332 28899999888887766543 23689999997555 333 2
Q ss_pred CCCcCcccEEEEEEcCCC-CcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463 324 STPVDSWDHLTFIDLDDQ-AGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI 401 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~-~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 401 (790)
...|.++|+..= ++ ....-.++.+ ..+... +.+|||||.|...++. ..++.++.-. |.+..-
T Consensus 161 ------~~~IkLyD~Rs~dkg--PF~tf~i~~~~~~ew~~-l~FS~dGK~iLlsT~~-----s~~~~lDAf~--G~~~~t 224 (311)
T KOG1446|consen 161 ------SELIKLYDLRSFDKG--PFTTFSITDNDEAEWTD-LEFSPDGKSILLSTNA-----SFIYLLDAFD--GTVKST 224 (311)
T ss_pred ------CCeEEEEEecccCCC--CceeEccCCCCccceee-eEEcCCCCEEEEEeCC-----CcEEEEEccC--CcEeee
Confidence 226888887531 10 0001123322 112233 7899999999988876 5677787644 332211
Q ss_pred eecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCe
Q psy463 402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR 448 (790)
Q Consensus 402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~ 448 (790)
-.. .......--+..|+||+++++-.. +-..|.++++++++
T Consensus 225 fs~---~~~~~~~~~~a~ftPds~Fvl~gs---~dg~i~vw~~~tg~ 265 (311)
T KOG1446|consen 225 FSG---YPNAGNLPLSATFTPDSKFVLSGS---DDGTIHVWNLETGK 265 (311)
T ss_pred Eee---ccCCCCcceeEEECCCCcEEEEec---CCCcEEEEEcCCCc
Confidence 110 011111224688999999775433 33457888887643
No 221
>PTZ00421 coronin; Provisional
Probab=98.21 E-value=0.0017 Score=70.85 Aligned_cols=168 Identities=16% Similarity=0.213 Sum_probs=95.8
Q ss_pred CEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 247 PVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 247 ~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
..+..+.|+|++. +++....+. .|.++|+.+++........ . .......|+|||+.|+ +.+ .++
T Consensus 126 ~~V~~l~f~P~~~~iLaSgs~Dg---tVrIWDl~tg~~~~~l~~h--~---~~V~sla~spdG~lLa-tgs----~Dg-- 190 (493)
T PTZ00421 126 KKVGIVSFHPSAMNVLASAGADM---VVNVWDVERGKAVEVIKCH--S---DQITSLEWNLDGSLLC-TTS----KDK-- 190 (493)
T ss_pred CcEEEEEeCcCCCCEEEEEeCCC---EEEEEECCCCeEEEEEcCC--C---CceEEEEEECCCCEEE-Eec----CCC--
Confidence 4466789999975 555544332 3888999888654433211 1 1245789999999776 555 456
Q ss_pred CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecc
Q psy463 326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDL 405 (790)
Q Consensus 326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~ 405 (790)
.|.++|+.+++ ....+..+.........|.+++..|+..+.... ..+.|...++... .++..... +
T Consensus 191 ------~IrIwD~rsg~-----~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s-~Dr~VklWDlr~~-~~p~~~~~-~ 256 (493)
T PTZ00421 191 ------KLNIIDPRDGT-----IVSSVEAHASAKSQRCLWAKRKDLIITLGCSKS-QQRQIMLWDTRKM-ASPYSTVD-L 256 (493)
T ss_pred ------EEEEEECCCCc-----EEEEEecCCCCcceEEEEcCCCCeEEEEecCCC-CCCeEEEEeCCCC-CCceeEec-c
Confidence 68899988775 123333322111223678898887665443211 1145555565431 11111111 0
Q ss_pred cccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463 406 LTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL 449 (790)
Q Consensus 406 ~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~ 449 (790)
........+.|++|++.++....+ -..|.++++.+++.
T Consensus 257 ----d~~~~~~~~~~d~d~~~L~lggkg--Dg~Iriwdl~~~~~ 294 (493)
T PTZ00421 257 ----DQSSALFIPFFDEDTNLLYIGSKG--EGNIRCFELMNERL 294 (493)
T ss_pred ----CCCCceEEEEEcCCCCEEEEEEeC--CCeEEEEEeeCCce
Confidence 022345567899999987665433 34678888766543
No 222
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.17 E-value=4.8e-05 Score=79.34 Aligned_cols=69 Identities=20% Similarity=0.212 Sum_probs=54.5
Q ss_pred hhhccCC-ccEEEEecCCCcccchhhhHHHHHHHHhcCC-ceEEEEcCCCCCcCC--C--cchHHHHHHHHHHHHh
Q psy463 719 KVDRIRD-KQYLLVHGTMDDNVHFQQSMMLAKSLQHADI-MFQSQTYPDEEHGLI--G--VRPHFYHTLERFLDSC 788 (790)
Q Consensus 719 ~~~~i~~-~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~-~~~~~~~p~~~H~~~--~--~~~~~~~~i~~fl~~~ 788 (790)
.+++| + +|+|.+.|+.|.++|+.++..+.+.+...+- +.+.++.+++||.-. . .+++++..|.+||.++
T Consensus 332 dl~~I-~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 332 DPGAI-TRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred cHHHC-cccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 35678 6 9999999999999999999999988633322 345677778899643 2 6788999999999864
No 223
>KOG0266|consensus
Probab=98.17 E-value=0.00043 Score=75.57 Aligned_cols=164 Identities=13% Similarity=0.167 Sum_probs=100.6
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
....++....|+|+|+.+.....+.. |.++|..++++...+....+ ......|++||..|+ ..+ .+|
T Consensus 244 gH~~~v~~~~f~p~g~~i~Sgs~D~t---vriWd~~~~~~~~~l~~hs~-----~is~~~f~~d~~~l~-s~s----~d~ 310 (456)
T KOG0266|consen 244 GHSTYVTSVAFSPDGNLLVSGSDDGT---VRIWDVRTGECVRKLKGHSD-----GISGLAFSPDGNLLV-SAS----YDG 310 (456)
T ss_pred CCCCceEEEEecCCCCEEEEecCCCc---EEEEeccCCeEEEeeeccCC-----ceEEEEECCCCCEEE-EcC----CCc
Confidence 55677899999999986666554433 99999999888776654321 255788999999887 444 456
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCc---ccccCCCeE-EeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVP---VPLTRGRFT-VTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE 399 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~---~~lt~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 399 (790)
.|.++|+.++. . ..+...... ......|+|++++|+....++. ..+|.+. .. ..+.
T Consensus 311 --------~i~vwd~~~~~------~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~---~~~w~l~--~~-~~~~ 370 (456)
T KOG0266|consen 311 --------TIRVWDLETGS------KLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRT---LKLWDLR--SG-KSVG 370 (456)
T ss_pred --------cEEEEECCCCc------eeeeecccCCCCCCceeEEEECCCCcEEEEecCCCe---EEEEEcc--CC-ccee
Confidence 68899998775 2 123222222 2334789999997776665532 4444443 21 1122
Q ss_pred eeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463 400 CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ 447 (790)
Q Consensus 400 ~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~ 447 (790)
+.+.. ......+..+..++++++++..... ..|++++..++
T Consensus 371 ~~~~~----~~~~~~~~~~~~~~~~~~i~sg~~d---~~v~~~~~~s~ 411 (456)
T KOG0266|consen 371 TYTGH----SNLVRCIFSPTLSTGGKLIYSGSED---GSVYVWDSSSG 411 (456)
T ss_pred eeccc----CCcceeEecccccCCCCeEEEEeCC---ceEEEEeCCcc
Confidence 22221 0011234456668888877554433 34777777653
No 224
>KOG0973|consensus
Probab=98.17 E-value=0.00016 Score=80.73 Aligned_cols=184 Identities=12% Similarity=0.081 Sum_probs=102.9
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEEC--------CCCc--------eeEEEE-EeCCCcccccCCceeEcc
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSI--------NEGT--------CDVVFS-RDLDRGWFEPFDHLRFSS 306 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~--------~~g~--------~~~l~~-~~~~~~~~~~~~~~~~sp 306 (790)
...+.+.-+.|||||++++.-+.+. .-.|+.... .+|. +..++. .+. -..+..|||
T Consensus 67 ~h~~sv~CVR~S~dG~~lAsGSDD~-~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~------DV~Dv~Wsp 139 (942)
T KOG0973|consen 67 DHDGSVNCVRFSPDGSYLASGSDDR-LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDS------DVLDVNWSP 139 (942)
T ss_pred cccCceeEEEECCCCCeEeeccCcc-eEEEeeecccCCcccccccccccccceeeEEEEEecCCC------ccceeccCC
Confidence 4455677899999999877765442 112333331 0011 111111 111 145899999
Q ss_pred CCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEE
Q psy463 307 DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHM 386 (790)
Q Consensus 307 Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l 386 (790)
|++.++ +.+ .+. .+.+++..+-+ ..+.|..+..-+.+ +.|+|-|++++-.+.+.. -.+
T Consensus 140 ~~~~lv-S~s----~Dn--------sViiwn~~tF~-----~~~vl~~H~s~VKG-vs~DP~Gky~ASqsdDrt---ikv 197 (942)
T KOG0973|consen 140 DDSLLV-SVS----LDN--------SVIIWNAKTFE-----LLKVLRGHQSLVKG-VSWDPIGKYFASQSDDRT---LKV 197 (942)
T ss_pred CccEEE-Eec----ccc--------eEEEEccccce-----eeeeeecccccccc-eEECCccCeeeeecCCce---EEE
Confidence 999887 665 333 47777766554 24455555555666 899999998887777743 566
Q ss_pred EEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC-CCeEEEEecCC-----------CeEEEecc
Q psy463 387 YRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG-IPEIMLFDKTG-----------QRLLYWDT 454 (790)
Q Consensus 387 ~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~-~~~i~~~~~~~-----------~~~~~l~~ 454 (790)
|+.+-- +-.+.++..... ....-.+..++|||||++|+..-.-.+ .+.+-+++-.+ +..+.+..
T Consensus 198 wrt~dw---~i~k~It~pf~~-~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrF 273 (942)
T KOG0973|consen 198 WRTSDW---GIEKSITKPFEE-SPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRF 273 (942)
T ss_pred EEcccc---eeeEeeccchhh-CCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEe
Confidence 663211 122333321100 001235567899999999976533223 44455544332 23455667
Q ss_pred chhHHH
Q psy463 455 NEDLRT 460 (790)
Q Consensus 455 ~~~~~~ 460 (790)
||.+..
T Consensus 274 nP~lfe 279 (942)
T KOG0973|consen 274 NPKLFE 279 (942)
T ss_pred ChHHhc
Confidence 776643
No 225
>PRK04940 hypothetical protein; Provisional
Probab=98.10 E-value=9e-05 Score=67.40 Aligned_cols=55 Identities=9% Similarity=0.116 Sum_probs=43.5
Q ss_pred ccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHH
Q psy463 726 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDS 787 (790)
Q Consensus 726 ~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~ 787 (790)
-.++++..+.|+++...++.+.+... .+..+.+|.+|.|. +-++....|.+|+.+
T Consensus 125 ~r~~vllq~gDEvLDyr~a~~~y~~~------y~~~v~~GGdH~f~-~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 125 DRCLVILSRNDEVLDSQRTAEELHPY------YEIVWDEEQTHKFK-NISPHLQRIKAFKTL 179 (180)
T ss_pred ccEEEEEeCCCcccCHHHHHHHhccC------ceEEEECCCCCCCC-CHHHHHHHHHHHHhc
Confidence 34689999999999998888777532 14678899999998 466788999999853
No 226
>PTZ00420 coronin; Provisional
Probab=98.07 E-value=0.0015 Score=71.88 Aligned_cols=121 Identities=11% Similarity=0.117 Sum_probs=63.0
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccc--cCCceeEccCCCEEEEEEccccccCCCCC
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFE--PFDHLRFSSDGKKMLLILSHNQESDGSTP 326 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~--~~~~~~~spDg~~i~~~~~~~~~~~g~~~ 326 (790)
+..++|+|||++++....+. .|.++|+.+++...-... ..+... ....-.|++|++.|+ +++. +...
T Consensus 170 V~SlswspdG~lLat~s~D~---~IrIwD~Rsg~~i~tl~g--H~g~~~s~~v~~~~fs~d~~~Il-TtG~--d~~~--- 238 (568)
T PTZ00420 170 LSSLKWNIKGNLLSGTCVGK---HMHIIDPRKQEIASSFHI--HDGGKNTKNIWIDGLGGDDNYIL-STGF--SKNN--- 238 (568)
T ss_pred EEEEEECCCCCEEEEEecCC---EEEEEECCCCcEEEEEec--ccCCceeEEEEeeeEcCCCCEEE-EEEc--CCCC---
Confidence 56789999999665554332 388899988865432221 111000 000123569999877 4431 2222
Q ss_pred cCcccEEEEEEcCC-CCcccCCCccc-ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463 327 VDSWDHLTFIDLDD-QAGIKDKVPVP-LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 327 ~~~~~~l~~~d~~~-~~~~~~~~~~~-lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
..+|.++|+.. ++ +.. +........-.+.|+++...+|..+.. + ..|+..++..
T Consensus 239 ---~R~VkLWDlr~~~~------pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkG-D---~tIr~~e~~~ 294 (568)
T PTZ00420 239 ---MREMKLWDLKNTTS------ALVTMSIDNASAPLIPHYDESTGLIYLIGKG-D---GNCRYYQHSL 294 (568)
T ss_pred ---ccEEEEEECCCCCC------ceEEEEecCCccceEEeeeCCCCCEEEEEEC-C---CeEEEEEccC
Confidence 34799999874 33 222 111111111136788876656555433 2 3455555543
No 227
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.06 E-value=0.0044 Score=73.29 Aligned_cols=153 Identities=11% Similarity=0.070 Sum_probs=77.5
Q ss_pred EEEEEEEc-cCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463 248 VLSRVNWA-NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP 326 (790)
Q Consensus 248 ~~~~~~ws-pDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~ 326 (790)
.+..+.|+ ++|+.++....+. .|+++|+..+....... .+... ......|+ |+..|+ +++ .++
T Consensus 619 ~v~~v~~~~~~g~~latgs~dg---~I~iwD~~~~~~~~~~~-~~h~~---~V~~v~f~-~~~~lv-s~s----~D~--- 682 (793)
T PLN00181 619 NICCVQFPSESGRSLAFGSADH---KVYYYDLRNPKLPLCTM-IGHSK---TVSYVRFV-DSSTLV-SSS----TDN--- 682 (793)
T ss_pred CeEEEEEeCCCCCEEEEEeCCC---eEEEEECCCCCccceEe-cCCCC---CEEEEEEe-CCCEEE-EEE----CCC---
Confidence 35677885 5688655544332 38889887654211111 11111 13357786 677665 555 455
Q ss_pred cCcccEEEEEEcCCCCcc-cCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc------
Q psy463 327 VDSWDHLTFIDLDDQAGI-KDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE------ 399 (790)
Q Consensus 327 ~~~~~~l~~~d~~~~~~~-~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~------ 399 (790)
.|.++|+..+... .......++.....+. ...|+++++.|+..+.++ .++..+... ..+.
T Consensus 683 -----~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~-~v~~s~~~~~lasgs~D~-----~v~iw~~~~--~~~~~s~~~~ 749 (793)
T PLN00181 683 -----TLKLWDLSMSISGINETPLHSFMGHTNVKN-FVGLSVSDGYIATGSETN-----EVFVYHKAF--PMPVLSYKFK 749 (793)
T ss_pred -----EEEEEeCCCCccccCCcceEEEcCCCCCee-EEEEcCCCCEEEEEeCCC-----EEEEEECCC--CCceEEEecc
Confidence 5778887532100 0001233443332222 378999998776666553 333333322 1100
Q ss_pred ---eeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463 400 ---CITCDLLTSANQKCSYSGATFSTNVSYYVLSC 431 (790)
Q Consensus 400 ---~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~ 431 (790)
.+.. + ........+..+.|++++..++...
T Consensus 750 ~~~~~~~-~-~~~~~~~~V~~v~ws~~~~~lva~~ 782 (793)
T PLN00181 750 TIDPVSG-L-EVDDASQFISSVCWRGQSSTLVAAN 782 (793)
T ss_pred cCCcccc-c-ccCCCCcEEEEEEEcCCCCeEEEec
Confidence 0000 0 0011234578899999999876553
No 228
>KOG0272|consensus
Probab=98.05 E-value=0.00019 Score=71.65 Aligned_cols=152 Identities=10% Similarity=0.052 Sum_probs=90.7
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
.....+..++|.|+|+++....-+.. -.+.|+.++..- |..+ + .. ....+.+|.|||.-++ +.+. +.
T Consensus 259 gH~~RVs~VafHPsG~~L~TasfD~t---WRlWD~~tk~El-L~QE-G--Hs-~~v~~iaf~~DGSL~~-tGGl----D~ 325 (459)
T KOG0272|consen 259 GHLARVSRVAFHPSGKFLGTASFDST---WRLWDLETKSEL-LLQE-G--HS-KGVFSIAFQPDGSLAA-TGGL----DS 325 (459)
T ss_pred cchhhheeeeecCCCceeeecccccc---hhhcccccchhh-Hhhc-c--cc-cccceeEecCCCceee-ccCc----cc
Confidence 56677889999999996665544432 345566666432 2222 1 11 1256899999998544 4442 12
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC 403 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~ 403 (790)
+. .++|+.+|. ..-.|..+..++.+ +.|||+|-.|+-.+.++. -+||.+.-.. ++..
T Consensus 326 ------~~--RvWDlRtgr-----~im~L~gH~k~I~~-V~fsPNGy~lATgs~Dnt---~kVWDLR~r~------~ly~ 382 (459)
T KOG0272|consen 326 ------LG--RVWDLRTGR-----CIMFLAGHIKEILS-VAFSPNGYHLATGSSDNT---CKVWDLRMRS------ELYT 382 (459)
T ss_pred ------hh--heeecccCc-----EEEEecccccceee-EeECCCceEEeecCCCCc---EEEeeecccc------ccee
Confidence 22 356887776 34456555555655 899999976666555543 5666553221 1211
Q ss_pred cccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463 404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPG 435 (790)
Q Consensus 404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~ 435 (790)
.+.....++.+.|+|++.+++.+++-.+
T Consensus 383 ----ipAH~nlVS~Vk~~p~~g~fL~TasyD~ 410 (459)
T KOG0272|consen 383 ----IPAHSNLVSQVKYSPQEGYFLVTASYDN 410 (459)
T ss_pred ----cccccchhhheEecccCCeEEEEcccCc
Confidence 1114456778999997666666655544
No 229
>KOG0772|consensus
Probab=98.04 E-value=0.00035 Score=71.56 Aligned_cols=278 Identities=13% Similarity=0.129 Sum_probs=132.3
Q ss_pred cCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCC
Q psy463 118 SDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGS 197 (790)
Q Consensus 118 pdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (790)
+.|.+++-....+...+.-+-|+.-..+-.+|+++=..-. +..++|..-+.+..+.+.|.+.++. |+.++.+
T Consensus 164 ~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~-~~fr~l~P~E~h~i~sl~ys~Tg~~-iLvvsg~------ 235 (641)
T KOG0772|consen 164 KHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASM-RSFRQLQPCETHQINSLQYSVTGDQ-ILVVSGS------ 235 (641)
T ss_pred cCCceEEEEeeecCCCceeeeccccceEEEEecccccccc-hhhhccCcccccccceeeecCCCCe-EEEEecC------
Confidence 3444444333333333333444445567777776532111 2256676667778888899887665 4444432
Q ss_pred CCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEE
Q psy463 198 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCS 277 (790)
Q Consensus 198 ~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~ 277 (790)
.+.-++|-+|-+. .....||.=+.+.-.. ...-..++...|.|+.+-.+.+.......+||-++
T Consensus 236 ------aqakl~DRdG~~~------~e~~KGDQYI~Dm~nT----KGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~ 299 (641)
T KOG0772|consen 236 ------AQAKLLDRDGFEI------VEFSKGDQYIRDMYNT----KGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVN 299 (641)
T ss_pred ------cceeEEccCCcee------eeeeccchhhhhhhcc----CCceeeeeccccccCcccceEEecCCCcEEEEecC
Confidence 2333333333211 0000111111100000 02233456788999999333332222333344443
Q ss_pred CCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCC--CcccccCC
Q psy463 278 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDK--VPVPLTRG 355 (790)
Q Consensus 278 ~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~--~~~~lt~~ 355 (790)
-. .+...++.....++-.-+...-.|+|||+.|+ ..- .+| -|-.++..+-. .+. ..+.--..
T Consensus 300 ~~-k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iA-agc----~DG--------SIQ~W~~~~~~--v~p~~~vk~AH~~ 363 (641)
T KOG0772|consen 300 NT-KSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIA-AGC----LDG--------SIQIWDKGSRT--VRPVMKVKDAHLP 363 (641)
T ss_pred Cc-hhheeEEeeccCCCcccCceeeecCCCcchhh-hcc----cCC--------ceeeeecCCcc--cccceEeeeccCC
Confidence 22 22233433322233222345788999999987 333 466 24444532111 000 00110001
Q ss_pred CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463 356 RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG 435 (790)
Q Consensus 356 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~ 435 (790)
.-++.. +.||+||++|+-.+.++. -.||-+.-- .++-..-.+|. ....-....||||.+.|+...+.+.
T Consensus 364 g~~Its-i~FS~dg~~LlSRg~D~t---LKvWDLrq~---kkpL~~~tgL~----t~~~~tdc~FSPd~kli~TGtS~~~ 432 (641)
T KOG0772|consen 364 GQDITS-ISFSYDGNYLLSRGFDDT---LKVWDLRQF---KKPLNVRTGLP----TPFPGTDCCFSPDDKLILTGTSAPN 432 (641)
T ss_pred CCceeE-EEeccccchhhhccCCCc---eeeeecccc---ccchhhhcCCC----ccCCCCccccCCCceEEEecccccC
Confidence 113344 889999997766655543 455544321 11111111111 1223345689999998877665554
Q ss_pred ---CCeEEEEecCC
Q psy463 436 ---IPEIMLFDKTG 446 (790)
Q Consensus 436 ---~~~i~~~~~~~ 446 (790)
.+.|+.+|..+
T Consensus 433 ~~~~g~L~f~d~~t 446 (641)
T KOG0772|consen 433 GMTAGTLFFFDRMT 446 (641)
T ss_pred CCCCceEEEEeccc
Confidence 66788887655
No 230
>KOG4497|consensus
Probab=98.01 E-value=0.00036 Score=67.43 Aligned_cols=108 Identities=13% Similarity=0.203 Sum_probs=72.9
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
+.....+..+||+|..+++..+.. -.+.+++.|+..-+...+.... ++...+.|.|.-..+++.. |
T Consensus 316 nPk~g~g~lafs~Ds~y~aTrnd~-~PnalW~Wdlq~l~l~avLiQk------~piraf~WdP~~prL~vct-------g 381 (447)
T KOG4497|consen 316 NPKCGAGKLAFSCDSTYAATRNDK-YPNALWLWDLQNLKLHAVLIQK------HPIRAFEWDPGRPRLVVCT-------G 381 (447)
T ss_pred CcccccceeeecCCceEEeeecCC-CCceEEEEechhhhhhhhhhhc------cceeEEEeCCCCceEEEEc-------C
Confidence 335667889999999966544322 2345899998876655444332 1356799999999998543 3
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
..+||.+.+.+-. ...+....+.+.. +.|..+|..++..+.+
T Consensus 382 ------~srLY~W~psg~~------~V~vP~~GF~i~~-l~W~~~g~~i~l~~kD 423 (447)
T KOG4497|consen 382 ------KSRLYFWAPSGPR------VVGVPKKGFNIQK-LQWLQPGEFIVLCGKD 423 (447)
T ss_pred ------CceEEEEcCCCce------EEecCCCCceeee-EEecCCCcEEEEEcCC
Confidence 4589999876633 3334443466655 8999999988777655
No 231
>KOG0273|consensus
Probab=98.01 E-value=0.0025 Score=64.82 Aligned_cols=148 Identities=10% Similarity=0.099 Sum_probs=91.4
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce-eEEEEEeCCCcccccCCceeEccCCCE---------EEE
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSDGKK---------MLL 313 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spDg~~---------i~~ 313 (790)
...+.+..+.|-|-|++++..+.+.+ +-+.....+.+ ..|.... .+ ...+.|||+|.- |+
T Consensus 357 GH~g~V~alk~n~tg~LLaS~SdD~T---lkiWs~~~~~~~~~l~~Hs-----ke-i~t~~wsp~g~v~~n~~~~~~l~- 426 (524)
T KOG0273|consen 357 GHHGEVNALKWNPTGSLLASCSDDGT---LKIWSMGQSNSVHDLQAHS-----KE-IYTIKWSPTGPVTSNPNMNLMLA- 426 (524)
T ss_pred cccCceEEEEECCCCceEEEecCCCe---eEeeecCCCcchhhhhhhc-----cc-eeeEeecCCCCccCCCcCCceEE-
Confidence 56677889999999996666554432 33443222222 2221110 01 236788888762 22
Q ss_pred EEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463 314 ILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 314 ~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
.++ .++ .+-++|+..+. ....++++...|.. +++||+|++++.-+.++. .+||....
T Consensus 427 sas----~ds--------tV~lwdv~~gv-----~i~~f~kH~~pVys-vafS~~g~ylAsGs~dg~---V~iws~~~-- 483 (524)
T KOG0273|consen 427 SAS----FDS--------TVKLWDVESGV-----PIHTLMKHQEPVYS-VAFSPNGRYLASGSLDGC---VHIWSTKT-- 483 (524)
T ss_pred Eee----cCC--------eEEEEEccCCc-----eeEeeccCCCceEE-EEecCCCcEEEecCCCCe---eEeccccc--
Confidence 332 233 57788988876 35568888777766 899999998888776644 56665433
Q ss_pred CCCC-cceeeecccccCCCcccEEEEEEecCCcEEEEEeecC
Q psy463 394 PTAT-PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGP 434 (790)
Q Consensus 394 ~~~~-~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~ 434 (790)
++ .++.. +.+.++.+.|+.+|.++....+..
T Consensus 484 --~~l~~s~~--------~~~~Ifel~Wn~~G~kl~~~~sd~ 515 (524)
T KOG0273|consen 484 --GKLVKSYQ--------GTGGIFELCWNAAGDKLGACASDG 515 (524)
T ss_pred --hheeEeec--------CCCeEEEEEEcCCCCEEEEEecCC
Confidence 22 22222 467789999999999887765443
No 232
>PTZ00420 coronin; Provisional
Probab=97.97 E-value=0.0096 Score=65.70 Aligned_cols=121 Identities=10% Similarity=0.085 Sum_probs=72.0
Q ss_pred CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463 244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD 322 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~ 322 (790)
.....+..+.|+|++. +++....+. .|.++|+.+++........ .......|+|||+.|+ ..+ .+
T Consensus 123 gH~~~V~sVaf~P~g~~iLaSgS~Dg---tIrIWDl~tg~~~~~i~~~------~~V~SlswspdG~lLa-t~s----~D 188 (568)
T PTZ00420 123 GHKKKISIIDWNPMNYYIMCSSGFDS---FVNIWDIENEKRAFQINMP------KKLSSLKWNIKGNLLS-GTC----VG 188 (568)
T ss_pred cCCCcEEEEEECCCCCeEEEEEeCCC---eEEEEECCCCcEEEEEecC------CcEEEEEECCCCCEEE-EEe----cC
Confidence 3456688999999998 444443332 3888899887654322211 1245789999999776 444 34
Q ss_pred CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEE----eEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC
Q psy463 323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV----TEILAWDEKENNVYFLSTQGSPIVQHMYRINIA 392 (790)
Q Consensus 323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~----~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 392 (790)
+ .|.++|+.+++ ....+..+...+ .....+++|++.|+-.+..+. ..+.|...++.
T Consensus 189 ~--------~IrIwD~Rsg~-----~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~-~~R~VkLWDlr 248 (568)
T PTZ00420 189 K--------HMHIIDPRKQE-----IASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKN-NMREMKLWDLK 248 (568)
T ss_pred C--------EEEEEECCCCc-----EEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCC-CccEEEEEECC
Confidence 4 68899998776 123333322211 111245688887776665531 12456666665
No 233
>KOG0275|consensus
Probab=97.97 E-value=0.00019 Score=68.87 Aligned_cols=124 Identities=7% Similarity=0.151 Sum_probs=78.3
Q ss_pred CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463 244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD 322 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~ 322 (790)
....++..+.+++||. ++..++.+. +.+++..+++|..-+...+..- ...+...-|....-+++++ +.
T Consensus 346 GHsSyvn~a~ft~dG~~iisaSsDgt----vkvW~~KtteC~~Tfk~~~~d~---~vnsv~~~PKnpeh~iVCN----rs 414 (508)
T KOG0275|consen 346 GHSSYVNEATFTDDGHHIISASSDGT----VKVWHGKTTECLSTFKPLGTDY---PVNSVILLPKNPEHFIVCN----RS 414 (508)
T ss_pred CccccccceEEcCCCCeEEEecCCcc----EEEecCcchhhhhhccCCCCcc---cceeEEEcCCCCceEEEEc----CC
Confidence 4556788899999999 554444443 8888888888866555433111 1234444555443332444 32
Q ss_pred CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeE--EEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc
Q psy463 323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTE--ILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE 399 (790)
Q Consensus 323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~--~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 399 (790)
+.+|++++.+.- .+..+.|..+-.. ....||.|.++|-.+.+ ..||-++..+ |+.+
T Consensus 415 --------ntv~imn~qGQv------VrsfsSGkREgGdFi~~~lSpkGewiYcigED-----~vlYCF~~~s--G~LE 472 (508)
T KOG0275|consen 415 --------NTVYIMNMQGQV------VRSFSSGKREGGDFINAILSPKGEWIYCIGED-----GVLYCFSVLS--GKLE 472 (508)
T ss_pred --------CeEEEEeccceE------EeeeccCCccCCceEEEEecCCCcEEEEEccC-----cEEEEEEeec--Ccee
Confidence 368999987765 6667765432211 14679999999998777 6788887766 4443
No 234
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=97.95 E-value=0.00041 Score=77.57 Aligned_cols=227 Identities=14% Similarity=0.167 Sum_probs=124.6
Q ss_pred EEEEeeCCCCeeeEE-EeecCCCCccccCCccccccCCceEEE-EeecC--CCCCCCCCCcCCcEEEEEEcCCcCCccCC
Q psy463 84 RITRCSINEGTCDVV-FSRDLDRGWFEPFDHLRFSSDGKKMLL-ILSHN--QESDGSTPVDSWDHLTFIDLDDQAGIKDK 159 (790)
Q Consensus 84 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~i~~-~~~~~--~~~~~~~~~g~~~~l~~~~~~~~~~~~~~ 159 (790)
.+.+.|..+...+.+ .... .....|.|||||++|+| ++... + ...||+-+|.+.....
T Consensus 330 ~L~~~D~dG~n~~~ve~~~~------~~i~sP~~SPDG~~vAY~ts~e~~~g----------~s~vYv~~L~t~~~~~-- 391 (912)
T TIGR02171 330 NLAYIDYTKGASRAVEIEDT------ISVYHPDISPDGKKVAFCTGIEGLPG----------KSSVYVRNLNASGSGL-- 391 (912)
T ss_pred eEEEEecCCCCceEEEecCC------CceecCcCCCCCCEEEEEEeecCCCC----------CceEEEEehhccCCCc--
Confidence 566666666555554 2211 12246999999999999 55433 2 2379999987653211
Q ss_pred cceeccccceEEEEEEeeeccCCccEEEEecccCCCCC-CCccccceeEEEecCCcccccCcCCccccccccc-------
Q psy463 160 VPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGS-TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFT------- 231 (790)
Q Consensus 160 ~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~------- 231 (790)
++-.+- .-.+..+.+.+.++..|+|++....+... .+. ...-|.+.++.|+ ..+|+.|-.|.++
T Consensus 392 vkl~ve---~aaiprwrv~e~gdt~ivyv~~a~nn~d~~~~~--~~stw~v~f~~gk---fg~p~kl~dga~hggvs~~~ 463 (912)
T TIGR02171 392 VKLPVE---NAAIPRWRVLENGDTVIVYVSDASNNKDDATFA--AYSTWQVPFANGK---FGTPKKLFDGAYHGGVSEDL 463 (912)
T ss_pred eEeecc---cccccceEecCCCCeEEEEEcCCCCCcchhhhh--hcceEEEEecCCC---CCCchhhhccccccccccCC
Confidence 111111 11222345567777789999987654422 222 1466888888763 2336666654444
Q ss_pred ---------eeehhhcccCCC------CCCCEEEEEEEccCCc-EEEEEeccC------------cceEEEEEECCCCce
Q psy463 232 ---------VTEILAWDEKEN------NVEPVLSRVNWANESV-VAAWVNRVQ------------NRARITRCSINEGTC 283 (790)
Q Consensus 232 ---------~~~~~~~~~~~~------~~~~~~~~~~wspDg~-~~~~~~r~~------------~~~~i~~~~~~~g~~ 283 (790)
++++++-..... -......+++.+.||. ...+.+-+. .+.+|.+.|..+.-.
T Consensus 464 ~lavtga~llr~~~~~~~~~~~~~~vwyn~eqacn~sl~~d~~~rt~fldfgg~tg~~fvg~~y~~he~~lvads~gklv 543 (912)
T TIGR02171 464 NLAVSGARLLRAHVANEDVDNGKDDVWYNGEQACNASLAKDGSKRTLFLDFGGSTGQAFVGQKYGVHERLLVADSKGKLV 543 (912)
T ss_pred ceeeehhhHhhhhhcccccccCccceeecchhccchhhhccCCcceEEEecCCccchhhccccccceeEEEEecCCCchh
Confidence 222221100000 0112236788888987 555544322 124677777655444
Q ss_pred eEEEEEeCCCcccccCCceeEccCCCEEE-EEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCC
Q psy463 284 DVVFSRDLDRGWFEPFDHLRFSSDGKKML-LILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG 355 (790)
Q Consensus 284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~-~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~ 355 (790)
+.+-...+ +. +....|--+.+.++ .+.. +.+|. ...|.++++..++ +..|..|
T Consensus 544 ~~v~ap~g---yt--fdh~ew~~~~~~~~vatl~---n~~g~-----h~ki~lv~~~~~~------i~~l~eg 597 (912)
T TIGR02171 544 RAVAAPAG---YT--FDHTEWVTGRSNLAVATLT---NVNGA-----HKKIALINLSDSK------VTELVEG 597 (912)
T ss_pred hhccCCCC---cc--ccchhhhcCCCceEEEEee---cCCCc-----cceEEEEEcCCCc------eEEeecc
Confidence 44443322 21 33455766534443 2344 56774 7899999999887 7777655
No 235
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=97.94 E-value=1.1e-05 Score=53.66 Aligned_cols=29 Identities=17% Similarity=0.267 Sum_probs=24.4
Q ss_pred cCCceeEeCCCCCceEEEEecC--CceeEEE
Q psy463 8 SSSSALWFSPSGNNLAYASFDD--NRTVIMT 36 (790)
Q Consensus 8 ~~~~~~~wSPDG~~iaf~~~~~--~~~~~~~ 36 (790)
+.+..|.||||||+|+|++.+. |..+||+
T Consensus 9 ~~~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 9 GDDGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp SSEEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred ccccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 3568899999999999999998 8888874
No 236
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.94 E-value=0.00047 Score=71.09 Aligned_cols=74 Identities=19% Similarity=0.208 Sum_probs=60.9
Q ss_pred hhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cc---hHHHHHHHHHHHHhhC
Q psy463 715 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VR---PHFYHTLERFLDSCFA 790 (790)
Q Consensus 715 ~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~---~~~~~~i~~fl~~~l~ 790 (790)
.+...+..+..+|+|++||..|..||...+..+++..... +.+...+++++|.... .. .+.+..+.+||.++|.
T Consensus 222 d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l~ 299 (299)
T COG1073 222 DPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHLL 299 (299)
T ss_pred cchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccCccHHHHHHHHHHHHHHHHhcC
Confidence 3446677772379999999999999999999999998875 5688889999998885 32 3789999999998763
No 237
>KOG2100|consensus
Probab=97.93 E-value=0.00056 Score=78.49 Aligned_cols=193 Identities=34% Similarity=0.597 Sum_probs=140.8
Q ss_pred CccceeecCCceeEeCCCCCceEEEEecCCceeEEEecccCCC-----------------CCCCc--------------C
Q psy463 1 MFTEEVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNP-----------------GHPSS--------------Q 49 (790)
Q Consensus 1 ~~~~~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~-----------------~~~~~--------------~ 49 (790)
+|+||++....+.||||||..+||++.++..++.+.++..++. ++.+. .
T Consensus 200 ~yeeEv~~~~~a~wwsp~g~~la~~~~~dt~V~~~~~~~~~~~~~yp~~~~~~ypk~g~~np~v~l~v~~~~~~~~~~~~ 279 (755)
T KOG2100|consen 200 IYEEEVLSSDSAIWWSPDGDRLAYASFNDTKVETINLPGYTDDDQYPKSTNFHYPKAGAPNPAVSLFVVDLHDPPRLGIP 279 (755)
T ss_pred eeehhhcccCccceeCCCCceeEEEEecccccceEEeccccccccCcccceeecCCCCCCCCeEEEEEEeCCCceeeccC
Confidence 6999999999999999999999999998887766666555443 22211 1
Q ss_pred CCccccCCCCccccccCCCcc-eeEeeeecccceeEEEEeeCCCCeeeEEEeecCCCCccccCC-ccccccCCceEEEEe
Q psy463 50 YTQAINLREPVLSRVNWANES-VVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFD-HLRFSSDGKKMLLIL 127 (790)
Q Consensus 50 ~~~~~~~~~~~~~~~~w~~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~i~~~~ 127 (790)
.+...+...++...+.|..+. ..+.|++|.|+...+.+|+.+ +.|+..++..+..+|+.... .|.++.|+....+..
T Consensus 280 ~~~~~~~~~~~~~~~~W~~~~~~~~~~~~r~~~~~~~~~cd~~-~~~~~~~~~~~~~~W~~~~~~~~~~~~d~~~~~~~~ 358 (755)
T KOG2100|consen 280 PPTNQRSGEYYVTNVKWDTTEKVLVVWTNREQNISVETLCDTP-GICRVVYEESSDGGWVEHQNVEPVFSSDGSSYLKVD 358 (755)
T ss_pred CccccccCceEEEEEEEecCccEEEEEEccCCCeeeeEEecCc-ccceeeEeccccccccccccccceEeecCCceeEEE
Confidence 111222334445566787554 466999999999999999999 99998888765558997665 689999997766665
Q ss_pred ecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeE
Q psy463 128 SHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLT 207 (790)
Q Consensus 128 ~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 207 (790)
....+. +.|+..+...++. ....+|.|.|++..+.+++ ...+.++|.+.. .. ....+||
T Consensus 359 ~~~~~~--------~~hi~~~~~~~~~-----~~~~lt~g~w~v~~i~~~~-~~~~~i~f~~~~-~~------~~~~~ly 417 (755)
T KOG2100|consen 359 SVSDGG--------YNHIAYLKLSNGS-----EPRMLTSGNWEVTSILGYD-KDSNRIYFDAYE-ED------PSERHLY 417 (755)
T ss_pred eeccCC--------EEEEEEEEcCCCC-----ccccccccceEEEEecccc-CCCceEEEEecC-CC------CCceEEE
Confidence 544321 5699999887762 3678999999999999999 444435555442 21 2347999
Q ss_pred EEecCCcc
Q psy463 208 FIDLDDQA 215 (790)
Q Consensus 208 ~~~~~~~~ 215 (790)
.+++.+..
T Consensus 418 ~i~~~~~~ 425 (755)
T KOG2100|consen 418 SISLGSGT 425 (755)
T ss_pred EEEccccc
Confidence 99998876
No 238
>KOG1553|consensus
Probab=97.93 E-value=7.8e-05 Score=72.54 Aligned_cols=133 Identities=16% Similarity=0.147 Sum_probs=91.4
Q ss_pred EEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCC-hh
Q psy463 471 EYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALK-GN 549 (790)
Q Consensus 471 ~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~-g~ 549 (790)
+..++.+.||.+|..+.+.-..-. .+.+.-+|+..-|..+-.++ .....-+ +.||.|+-.+.+|.+++ |-
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~--~~ngq~LvIC~EGNAGFYEv------G~m~tP~-~lgYsvLGwNhPGFagSTG~ 285 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQ--SGNGQDLVICFEGNAGFYEV------GVMNTPA-QLGYSVLGWNHPGFAGSTGL 285 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCC--CCCCceEEEEecCCccceEe------eeecChH-HhCceeeccCCCCccccCCC
Confidence 345667778888887766433111 23445688888887765332 2222222 26999999999986653 22
Q ss_pred hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc
Q psy463 550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI 623 (790)
Q Consensus 550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~ 623 (790)
++. ..+.....+.+++.+..++ .-.+.|+++|||.||+.++++|..+| .++++|+-+...|+.
T Consensus 286 P~p--------~n~~nA~DaVvQfAI~~Lg-f~~edIilygWSIGGF~~~waAs~YP--dVkavvLDAtFDDll 348 (517)
T KOG1553|consen 286 PYP--------VNTLNAADAVVQFAIQVLG-FRQEDIILYGWSIGGFPVAWAASNYP--DVKAVVLDATFDDLL 348 (517)
T ss_pred CCc--------ccchHHHHHHHHHHHHHcC-CCccceEEEEeecCCchHHHHhhcCC--CceEEEeecchhhhh
Confidence 221 2445555567788887666 55678999999999999999999998 588999888876654
No 239
>KOG0305|consensus
Probab=97.93 E-value=0.00097 Score=70.47 Aligned_cols=117 Identities=12% Similarity=0.071 Sum_probs=75.5
Q ss_pred CCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463 246 EPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS 324 (790)
Q Consensus 246 ~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~ 324 (790)
..-+-.++|+|=-+ +++. ..+.....|...+..+|+........ .+.-+..||+..+.|+.... .+
T Consensus 343 ~aAVKA~awcP~q~~lLAs-GGGs~D~~i~fwn~~~g~~i~~vdtg------sQVcsL~Wsk~~kEi~sthG-----~s- 409 (484)
T KOG0305|consen 343 TAAVKALAWCPWQSGLLAT-GGGSADRCIKFWNTNTGARIDSVDTG------SQVCSLIWSKKYKELLSTHG-----YS- 409 (484)
T ss_pred ceeeeEeeeCCCccCceEE-cCCCcccEEEEEEcCCCcEecccccC------CceeeEEEcCCCCEEEEecC-----CC-
Confidence 33455778888777 4444 33344455888888888664332221 12568999999999984332 12
Q ss_pred CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEE
Q psy463 325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRI 389 (790)
Q Consensus 325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 389 (790)
..+|.+++..+-+ ....++.+...+.. ++|+|||..|+..+.+.. -++|.+
T Consensus 410 -----~n~i~lw~~ps~~-----~~~~l~gH~~RVl~-la~SPdg~~i~t~a~DET---lrfw~~ 460 (484)
T KOG0305|consen 410 -----ENQITLWKYPSMK-----LVAELLGHTSRVLY-LALSPDGETIVTGAADET---LRFWNL 460 (484)
T ss_pred -----CCcEEEEeccccc-----eeeeecCCcceeEE-EEECCCCCEEEEecccCc---EEeccc
Confidence 4466666665544 25567777666655 899999999988887754 455544
No 240
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=97.87 E-value=7e-05 Score=84.26 Aligned_cols=101 Identities=18% Similarity=0.157 Sum_probs=63.4
Q ss_pred CCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhH-hh---------hh---------ccC
Q psy463 499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLK-YA---------GY---------RRL 559 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~-~~---------~~---------~~~ 559 (790)
.+.|+|+++||..+.. ..|. .....++++||.|+++|++|+|.+..... .. .+ ++-
T Consensus 447 ~g~P~VVllHG~~g~~---~~~~--~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn 521 (792)
T TIGR03502 447 DGWPVVIYQHGITGAK---ENAL--AFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDN 521 (792)
T ss_pred CCCcEEEEeCCCCCCH---HHHH--HHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccC
Confidence 4568999999988762 3333 23334455799999999999887633200 00 01 001
Q ss_pred CccchhHHHHHHHHHH------Hh---CCCcCCCceEEEEechHHHHHHHHHhc
Q psy463 560 GTVEIYDQINVTRYLQ------EN---LPYIDKTRTAIWGWSYGGYATGLALAL 604 (790)
Q Consensus 560 ~~~~~~D~~~~~~~l~------~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~ 604 (790)
-.+.+.|+......+. .. .+..+..++.++||||||.++..++..
T Consensus 522 ~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 522 LRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 1133566665555554 11 112556799999999999999998874
No 241
>KOG2139|consensus
Probab=97.87 E-value=0.00063 Score=66.74 Aligned_cols=161 Identities=14% Similarity=0.178 Sum_probs=96.0
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
.+..+++...|.+||..+...+-++ ..|.+.|+++|.+..|..... . ......|||||.+|+ .+. -++
T Consensus 193 pgh~pVtsmqwn~dgt~l~tAS~gs--ssi~iWdpdtg~~~pL~~~gl-g----g~slLkwSPdgd~lf-aAt----~da 260 (445)
T KOG2139|consen 193 PGHNPVTSMQWNEDGTILVTASFGS--SSIMIWDPDTGQKIPLIPKGL-G----GFSLLKWSPDGDVLF-AAT----CDA 260 (445)
T ss_pred CCCceeeEEEEcCCCCEEeecccCc--ceEEEEcCCCCCcccccccCC-C----ceeeEEEcCCCCEEE-Eec----ccc
Confidence 4456789999999999444433322 238899999999888773221 1 145789999999886 444 334
Q ss_pred CCCcCcccEEEEEE-cCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc---
Q psy463 324 STPVDSWDHLTFID-LDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE--- 399 (790)
Q Consensus 324 ~~~~~~~~~l~~~d-~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~--- 399 (790)
-..||.-. .-+.+ .-.+..+ .+.. ..|+|+|+.|.|.... . ..||++...+......
T Consensus 261 ------vfrlw~e~q~wt~e------rw~lgsg--rvqt-acWspcGsfLLf~~sg-s---p~lysl~f~~~~~~~~~~~ 321 (445)
T KOG2139|consen 261 ------VFRLWQENQSWTKE------RWILGSG--RVQT-ACWSPCGSFLLFACSG-S---PRLYSLTFDGEDSVFLRPQ 321 (445)
T ss_pred ------eeeeehhcccceec------ceeccCC--ceee-eeecCCCCEEEEEEcC-C---ceEEEEeecCCCccccCcc
Confidence 12344211 11121 2223333 4444 6899999999988764 2 5788887655322111
Q ss_pred ---e--eeeccc--ccCCC----cccEEEEEEecCCcEEEEEeecCC
Q psy463 400 ---C--ITCDLL--TSANQ----KCSYSGATFSTNVSYYVLSCIGPG 435 (790)
Q Consensus 400 ---~--lt~~~~--~~~~~----~~~~~~~~~s~dg~~~~~~~~~~~ 435 (790)
. +..++. +.-.+ -+.....+|.|.|.|++..+.+..
T Consensus 322 ~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~ 368 (445)
T KOG2139|consen 322 SIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQS 368 (445)
T ss_pred cceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCc
Confidence 1 111110 00012 235567899999999999887765
No 242
>KOG1445|consensus
Probab=97.87 E-value=0.00014 Score=75.97 Aligned_cols=123 Identities=13% Similarity=0.194 Sum_probs=71.5
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
+....+..++|||||+.++.+-.+. .|.++...+++ +.+.+..+.-+ .....+.|..||+.++.+.- ++..
T Consensus 718 gHtdqIf~~AWSpdGr~~AtVcKDg---~~rVy~Prs~e-~pv~Eg~gpvg--tRgARi~wacdgr~viv~Gf---dk~S 788 (1012)
T KOG1445|consen 718 GHTDQIFGIAWSPDGRRIATVCKDG---TLRVYEPRSRE-QPVYEGKGPVG--TRGARILWACDGRIVIVVGF---DKSS 788 (1012)
T ss_pred cCcCceeEEEECCCCcceeeeecCc---eEEEeCCCCCC-CccccCCCCcc--CcceeEEEEecCcEEEEecc---cccc
Confidence 5667788999999999666554433 27787776654 33444322111 11346899999998875444 3444
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEE---eEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV---TEILAWDEKENNVYFLSTQGSPIVQHMYRINI 391 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~---~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 391 (790)
..+|-++++.+=. .+.|-....++ .-.+.+++|...| |.+..|+ +.+|.+.+
T Consensus 789 ------eRQv~~Y~Aq~l~------~~pl~t~~lDvaps~LvP~YD~Ds~~l-fltGKGD---~~v~~yEv 843 (1012)
T KOG1445|consen 789 ------ERQVQMYDAQTLD------LRPLYTQVLDVAPSPLVPHYDYDSNVL-FLTGKGD---RFVNMYEV 843 (1012)
T ss_pred ------hhhhhhhhhhhcc------CCcceeeeecccCccccccccCCCceE-EEecCCC---ceEEEEEe
Confidence 5677777765422 22332221222 1247789998754 5555544 45555544
No 243
>KOG0263|consensus
Probab=97.86 E-value=0.00042 Score=74.81 Aligned_cols=109 Identities=17% Similarity=0.203 Sum_probs=75.2
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD 328 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~ 328 (790)
+.-+.+.|++.+++.-+. ...+-+.|..+|.+.+++.. ..++....+|||+|++|+ +.. .+|
T Consensus 538 V~cv~FHPNs~Y~aTGSs---D~tVRlWDv~~G~~VRiF~G-----H~~~V~al~~Sp~Gr~La-Sg~----ed~----- 599 (707)
T KOG0263|consen 538 VDCVSFHPNSNYVATGSS---DRTVRLWDVSTGNSVRIFTG-----HKGPVTALAFSPCGRYLA-SGD----EDG----- 599 (707)
T ss_pred cceEEECCcccccccCCC---CceEEEEEcCCCcEEEEecC-----CCCceEEEEEcCCCceEe-ecc----cCC-----
Confidence 445889999987665422 23488889999999999853 223456899999999998 554 556
Q ss_pred cccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEE
Q psy463 329 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMY 387 (790)
Q Consensus 329 ~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 387 (790)
.|-++|+.+++ ...++-.+...+. .+.||.||..|+..+.+.. ..||
T Consensus 600 ---~I~iWDl~~~~-----~v~~l~~Ht~ti~-SlsFS~dg~vLasgg~Dns---V~lW 646 (707)
T KOG0263|consen 600 ---LIKIWDLANGS-----LVKQLKGHTGTIY-SLSFSRDGNVLASGGADNS---VRLW 646 (707)
T ss_pred ---cEEEEEcCCCc-----chhhhhcccCcee-EEEEecCCCEEEecCCCCe---EEEE
Confidence 68889998877 2445544443344 3889999996666555532 5555
No 244
>KOG3253|consensus
Probab=97.85 E-value=0.00023 Score=74.67 Aligned_cols=51 Identities=12% Similarity=0.141 Sum_probs=43.8
Q ss_pred hhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463 718 NKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG 772 (790)
Q Consensus 718 ~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~ 772 (790)
+.+-.+ +.|+|++.|.+|..|++...+++.+.+++. ++++++.+++|.+..
T Consensus 298 E~Lldm-k~PVLFV~Gsnd~mcspn~ME~vreKMqA~---~elhVI~~adhsmai 348 (784)
T KOG3253|consen 298 EALLDM-KQPVLFVIGSNDHMCSPNSMEEVREKMQAE---VELHVIGGADHSMAI 348 (784)
T ss_pred hhhHhc-CCceEEEecCCcccCCHHHHHHHHHHhhcc---ceEEEecCCCccccC
Confidence 445566 899999999999999999999998888764 689999999998864
No 245
>KOG1274|consensus
Probab=97.84 E-value=0.0042 Score=68.57 Aligned_cols=160 Identities=16% Similarity=0.208 Sum_probs=98.1
Q ss_pred CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
...+..++++-+|++++....+ ..|.+++..++.....+.. ...+.....|+|.|+.|+. .+ -+|
T Consensus 96 tlp~r~~~v~g~g~~iaagsdD---~~vK~~~~~D~s~~~~lrg-----h~apVl~l~~~p~~~fLAv-ss----~dG-- 160 (933)
T KOG1274|consen 96 TLPIRDLAVSGSGKMIAAGSDD---TAVKLLNLDDSSQEKVLRG-----HDAPVLQLSYDPKGNFLAV-SS----CDG-- 160 (933)
T ss_pred eccceEEEEecCCcEEEeecCc---eeEEEEeccccchheeecc-----cCCceeeeeEcCCCCEEEE-Ee----cCc--
Confidence 3446678999999966554332 2377888777655444432 1123567899999998884 33 467
Q ss_pred CcCcccEEEEEEcCCCCcccCCCcccccC----CC---eEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc
Q psy463 326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTR----GR---FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP 398 (790)
Q Consensus 326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~----~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 398 (790)
.|+++++..+.. ...|+. .+ -.+...++|+|+|..+++...++. ..+| +.++ ++.
T Consensus 161 ------~v~iw~~~~~~~-----~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~---Vkvy--~r~~--we~ 222 (933)
T KOG1274|consen 161 ------KVQIWDLQDGIL-----SKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNT---VKVY--SRKG--WEL 222 (933)
T ss_pred ------eEEEEEcccchh-----hhhcccCCccccccccceeeeeeecCCCCeEEeeccCCe---EEEE--ccCC--cee
Confidence 788999887751 222322 11 122345899999988888877733 4444 4444 222
Q ss_pred -ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463 399 -ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG 446 (790)
Q Consensus 399 -~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~ 446 (790)
..|.... ....+....|||.|+||+.+.- ..+|.+++.++
T Consensus 223 ~f~Lr~~~-----~ss~~~~~~wsPnG~YiAAs~~---~g~I~vWnv~t 263 (933)
T KOG1274|consen 223 QFKLRDKL-----SSSKFSDLQWSPNGKYIAASTL---DGQILVWNVDT 263 (933)
T ss_pred heeecccc-----cccceEEEEEcCCCcEEeeecc---CCcEEEEeccc
Confidence 1222211 1223778999999999987632 45577777663
No 246
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.83 E-value=0.031 Score=56.26 Aligned_cols=248 Identities=13% Similarity=0.164 Sum_probs=130.8
Q ss_pred cccceeEEEEeeCCCCeeeEEEeecCC-CCcccc-CCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCC
Q psy463 78 RVQNRARITRCSINEGTCDVVFSRDLD-RGWFEP-FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAG 155 (790)
Q Consensus 78 r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~ 155 (790)
|+...-+++++|..|-....-..++.. +.-... .....+|+|||++++..-... ..+.++|++.++
T Consensus 62 rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa-----------~SVtVVDl~~~k- 129 (342)
T PF06433_consen 62 RGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPA-----------TSVTVVDLAAKK- 129 (342)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSS-----------EEEEEEETTTTE-
T ss_pred cccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCC-----------CeEEEEECCCCc-
Confidence 345556778889888877765565553 322211 123588999999988765433 379999998874
Q ss_pred ccCCcceec-cccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecC-CcccccCcCCcccccccccee
Q psy463 156 IKDKVPVPL-TRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLD-DQAGIKDKVPVPLTRGRFTVT 233 (790)
Q Consensus 156 ~~~~~~~~l-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~lt~~~~~~~ 233 (790)
+...+ +.| +..++.+.++ - |.+.- +| ..+-.+.++ .|+. .+-.
T Consensus 130 ----vv~ei~~PG---C~~iyP~~~~----~-F~~lC--~D--------Gsl~~v~Ld~~Gk~------~~~~------- 174 (342)
T PF06433_consen 130 ----VVGEIDTPG---CWLIYPSGNR----G-FSMLC--GD--------GSLLTVTLDADGKE------AQKS------- 174 (342)
T ss_dssp ----EEEEEEGTS---EEEEEEEETT----E-EEEEE--TT--------SCEEEEEETSTSSE------EEEE-------
T ss_pred ----eeeeecCCC---EEEEEecCCC----c-eEEEe--cC--------CceEEEEECCCCCE------eEee-------
Confidence 34444 222 2222333222 1 33321 11 355666665 3331 1100
Q ss_pred ehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEE------eCCCccc-ccCCceeEc
Q psy463 234 EILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSR------DLDRGWF-EPFDHLRFS 305 (790)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~------~~~~~~~-~~~~~~~~s 305 (790)
-.-|....+.....+.++.++. +++.+-.+. +|.+++.+...+..-.- +...+|. +...-.+++
T Consensus 175 ----t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~----v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~ 246 (342)
T PF06433_consen 175 ----TKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGN----VYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYH 246 (342)
T ss_dssp ----EEESSTTTS-B-S--EEETTTTEEEEEBTTSE----EEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEE
T ss_pred ----ccccCCCCcccccccceECCCCeEEEEecCCE----EEEEeccCCcccccCcccccCccccccCcCCcceeeeeec
Confidence 0011112333445677777665 554444443 99999988765433221 1123565 223457888
Q ss_pred cCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEE
Q psy463 306 SDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQH 385 (790)
Q Consensus 306 pDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 385 (790)
+..+.||++- +. ...|.+ -+.-++||++|++++++ ..++.-. ..+. .++.+.|.+-++|..+.+. ..
T Consensus 247 ~~~~rlyvLM-h~-g~~gsH-KdpgteVWv~D~~t~kr-----v~Ri~l~-~~~~-Si~Vsqd~~P~L~~~~~~~---~~ 313 (342)
T PF06433_consen 247 AASGRLYVLM-HQ-GGEGSH-KDPGTEVWVYDLKTHKR-----VARIPLE-HPID-SIAVSQDDKPLLYALSAGD---GT 313 (342)
T ss_dssp TTTTEEEEEE-EE---TT-T-TS-EEEEEEEETTTTEE-----EEEEEEE-EEES-EEEEESSSS-EEEEEETTT---TE
T ss_pred cccCeEEEEe-cC-CCCCCc-cCCceEEEEEECCCCeE-----EEEEeCC-Cccc-eEEEccCCCcEEEEEcCCC---Ce
Confidence 8888887543 22 112211 00146999999998872 3444321 1222 3778899887777665543 58
Q ss_pred EEEEEcCC
Q psy463 386 MYRINIAD 393 (790)
Q Consensus 386 l~~~~~~~ 393 (790)
|++++..+
T Consensus 314 l~v~D~~t 321 (342)
T PF06433_consen 314 LDVYDAAT 321 (342)
T ss_dssp EEEEETTT
T ss_pred EEEEeCcC
Confidence 99999877
No 247
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.83 E-value=0.00043 Score=67.89 Aligned_cols=61 Identities=23% Similarity=0.278 Sum_probs=50.6
Q ss_pred CccEEEEecC------CCcccchhhhHHHHHHHHhcCCceEEEEcCC--CCCcCCCcchHHHHHHHHHH
Q psy463 725 DKQYLLVHGT------MDDNVHFQQSMMLAKSLQHADIMFQSQTYPD--EEHGLIGVRPHFYHTLERFL 785 (790)
Q Consensus 725 ~~P~Lii~G~------~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~--~~H~~~~~~~~~~~~i~~fl 785 (790)
.+.+|-|.|. .|-.||...+..+...++......+.+++.| +.|.-..+..++.+.|.+||
T Consensus 184 ~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~V~~~I~~FL 252 (255)
T PF06028_consen 184 NIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQVDKLIIQFL 252 (255)
T ss_dssp T-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCHHHHHHHHHHH
T ss_pred CeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCHHHHHHHHHHh
Confidence 6889999998 8999999999999888888777777788876 57866657788889999997
No 248
>KOG2919|consensus
Probab=97.81 E-value=0.0024 Score=61.87 Aligned_cols=79 Identities=14% Similarity=0.137 Sum_probs=44.1
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCC-c-eeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEG-T-CDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES 321 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g-~-~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~ 321 (790)
...+.++.+.|-+||..++.-.|-.++ |-..|+... . ...|-...+++ ..---+...|+|+.|+ ... .
T Consensus 248 gh~gGvThL~~~edGn~lfsGaRk~dk--Il~WDiR~~~~pv~~L~rhv~~T---NQRI~FDld~~~~~La-sG~----t 317 (406)
T KOG2919|consen 248 GHGGGVTHLQWCEDGNKLFSGARKDDK--ILCWDIRYSRDPVYALERHVGDT---NQRILFDLDPKGEILA-SGD----T 317 (406)
T ss_pred ccCCCeeeEEeccCcCeecccccCCCe--EEEEeehhccchhhhhhhhccCc---cceEEEecCCCCceee-ccC----C
Confidence 456788999999999977776665544 545554321 1 11111111100 0001355688888776 332 5
Q ss_pred CCCCCcCcccEEEEEEcCC
Q psy463 322 DGSTPVDSWDHLTFIDLDD 340 (790)
Q Consensus 322 ~g~~~~~~~~~l~~~d~~~ 340 (790)
+| -|-++|+++
T Consensus 318 dG--------~V~vwdlk~ 328 (406)
T KOG2919|consen 318 DG--------SVRVWDLKD 328 (406)
T ss_pred Cc--------cEEEEecCC
Confidence 66 466777765
No 249
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.80 E-value=7.2e-05 Score=58.65 Aligned_cols=58 Identities=12% Similarity=0.036 Sum_probs=43.2
Q ss_pred CcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh
Q psy463 480 NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG 548 (790)
Q Consensus 480 g~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g 548 (790)
|.+|.+..+.|++ . ...+|+++||...... . .......++++||.|+.+|.||+|.+.
T Consensus 1 G~~L~~~~w~p~~-----~-~k~~v~i~HG~~eh~~---r--y~~~a~~L~~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 1 GTKLFYRRWKPEN-----P-PKAVVVIVHGFGEHSG---R--YAHLAEFLAEQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred CcEEEEEEecCCC-----C-CCEEEEEeCCcHHHHH---H--HHHHHHHHHhCCCEEEEECCCcCCCCC
Confidence 5678888998874 2 5789999999877632 2 223344556699999999999988765
No 250
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.80 E-value=0.0032 Score=65.91 Aligned_cols=78 Identities=21% Similarity=0.242 Sum_probs=56.1
Q ss_pred CCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHH----HHhCCCcCCCceEEEEechHHHHHHHHHhcCCC
Q psy463 532 KDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYL----QENLPYIDKTRTAIWGWSYGGYATGLALALDPS 607 (790)
Q Consensus 532 ~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l----~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~ 607 (790)
.|.-|+.+.+.-.+.-| +.+.|+..+...+ .+..+. ..|..|+|.+.||+.++.+++.+|+
T Consensus 99 ~GHPvYFV~F~p~P~pg-------------QTl~DV~~ae~~Fv~~V~~~hp~--~~kp~liGnCQgGWa~~mlAA~~Pd 163 (581)
T PF11339_consen 99 AGHPVYFVGFFPEPEPG-------------QTLEDVMRAEAAFVEEVAERHPD--APKPNLIGNCQGGWAAMMLAALRPD 163 (581)
T ss_pred cCCCeEEEEecCCCCCC-------------CcHHHHHHHHHHHHHHHHHhCCC--CCCceEEeccHHHHHHHHHHhcCcC
Confidence 58888887776544333 4567776554443 332342 2389999999999999999999997
Q ss_pred CceEEEEEeCCCCCccc
Q psy463 608 NVFKCGISVAPVTDWIY 624 (790)
Q Consensus 608 ~~~~~~v~~~~~~~~~~ 624 (790)
..--.+++++|++.|..
T Consensus 164 ~~gplvlaGaPlsywaG 180 (581)
T PF11339_consen 164 LVGPLVLAGAPLSYWAG 180 (581)
T ss_pred ccCceeecCCCcccccC
Confidence 55558888899987763
No 251
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.79 E-value=0.00028 Score=69.84 Aligned_cols=127 Identities=15% Similarity=0.183 Sum_probs=82.7
Q ss_pred CCceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccc--ccccchHHHHHhcCCeEEEEEcCCCC
Q psy463 467 LPSVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTE--RFSVDWNLYLADNKDIVVAYIDGRNS 544 (790)
Q Consensus 467 ~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~--~~~~~~~~~~~~~~G~~v~~~d~rG~ 544 (790)
......+.+.. |+..|..+.+.-+++ ++-.-|++.-|..+..+... .....+...++...|..|+.+||||.
T Consensus 109 ~~~~kRv~Iq~-D~~~IDt~~I~~~~a-----~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGV 182 (365)
T PF05677_consen 109 VSSVKRVPIQY-DGVKIDTMAIHQPEA-----KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGV 182 (365)
T ss_pred ccceeeEEEee-CCEEEEEEEeeCCCC-----CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCcc
Confidence 34456666666 899998887753332 22234566666655422100 00112445566667999999999998
Q ss_pred CCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC
Q psy463 545 ALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP 606 (790)
Q Consensus 545 ~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p 606 (790)
+.+...... ...+.|..+.++||+++...+.+++|++.|||+||.++..++..+.
T Consensus 183 g~S~G~~s~-------~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 183 GSSTGPPSR-------KDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred ccCCCCCCH-------HHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 764332111 2457788889999987433477899999999999999988776543
No 252
>KOG0284|consensus
Probab=97.78 E-value=0.00045 Score=68.77 Aligned_cols=264 Identities=13% Similarity=0.151 Sum_probs=139.9
Q ss_pred CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcce----------eEeeeec
Q psy463 9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESV----------VAAWVNR 78 (790)
Q Consensus 9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~----------~~~~~~r 78 (790)
....+.|+|+||+|.-.+. .|...+|.--.- .....+.-++..+..+.|+.++. +-+|.+.
T Consensus 98 ~V~~v~WtPeGRRLltgs~-SGEFtLWNg~~f--------nFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpn 168 (464)
T KOG0284|consen 98 PVNVVRWTPEGRRLLTGSQ-SGEFTLWNGTSF--------NFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPN 168 (464)
T ss_pred ceeeEEEcCCCceeEeecc-cccEEEecCcee--------eHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccc
Confidence 3456789999999986554 666666654221 12223444455555566654333 2245544
Q ss_pred ccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccC
Q psy463 79 VQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD 158 (790)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~ 158 (790)
-+|+..++.... +.....+|||...+++ +.+.++ -|-+.|.-..+
T Consensus 169 mnnVk~~~ahh~------------------eaIRdlafSpnDskF~-t~SdDg------------~ikiWdf~~~k---- 213 (464)
T KOG0284|consen 169 MNNVKIIQAHHA------------------EAIRDLAFSPNDSKFL-TCSDDG------------TIKIWDFRMPK---- 213 (464)
T ss_pred hhhhHHhhHhhh------------------hhhheeccCCCCceeE-EecCCC------------eEEEEeccCCc----
Confidence 444332222110 1123458888555444 232222 33344432221
Q ss_pred CcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhc
Q psy463 159 KVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAW 238 (790)
Q Consensus 159 ~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~ 238 (790)
.+..|+...|++..+ .|.|..+ +++.... ..-+-+.|..+|.. ...|.
T Consensus 214 -ee~vL~GHgwdVksv-dWHP~kg--Liasgsk-----------DnlVKlWDprSg~c-----l~tlh------------ 261 (464)
T KOG0284|consen 214 -EERVLRGHGWDVKSV-DWHPTKG--LIASGSK-----------DNLVKLWDPRSGSC-----LATLH------------ 261 (464)
T ss_pred -hhheeccCCCCccee-ccCCccc--eeEEccC-----------CceeEeecCCCcch-----hhhhh------------
Confidence 256677777887766 6777655 4443321 12334457666653 22222
Q ss_pred ccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccc
Q psy463 239 DEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHN 318 (790)
Q Consensus 239 ~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~ 318 (790)
.....+..+.|+|+|.++...++++. |.++|+.+-+. |..-.+... -+....|+|=...|+.+..
T Consensus 262 -----~HKntVl~~~f~~n~N~Llt~skD~~---~kv~DiR~mkE--l~~~r~Hkk---dv~~~~WhP~~~~lftsgg-- 326 (464)
T KOG0284|consen 262 -----GHKNTVLAVKFNPNGNWLLTGSKDQS---CKVFDIRTMKE--LFTYRGHKK---DVTSLTWHPLNESLFTSGG-- 326 (464)
T ss_pred -----hccceEEEEEEcCCCCeeEEccCCce---EEEEehhHhHH--HHHhhcchh---hheeeccccccccceeecc--
Confidence 45567889999999997777777653 77778763221 111110010 1447899999888874444
Q ss_pred cccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 319 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 319 ~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
.+| .|+.+.+...+ ....+...-......++|.|=|..|.-.+++
T Consensus 327 --~Dg--------svvh~~v~~~~-----p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd 371 (464)
T KOG0284|consen 327 --SDG--------SVVHWVVGLEE-----PLGEIPPAHDGEIWSLAYHPLGHILATGSND 371 (464)
T ss_pred --CCC--------ceEEEeccccc-----cccCCCcccccceeeeeccccceeEeecCCC
Confidence 455 45555554333 0112222211223348899998755444443
No 253
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.77 E-value=0.00056 Score=62.42 Aligned_cols=81 Identities=14% Similarity=0.157 Sum_probs=54.6
Q ss_pred HHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC
Q psy463 527 YLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP 606 (790)
Q Consensus 527 ~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p 606 (790)
..++++|+.|+.+|-.- .|-. ..-......|+.+.++...++ -..+++.++|.|+|+-+...+..+-|
T Consensus 23 ~~l~~~G~~VvGvdsl~------Yfw~---~rtP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp 90 (192)
T PF06057_consen 23 EALAKQGVPVVGVDSLR------YFWS---ERTPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLP 90 (192)
T ss_pred HHHHHCCCeEEEechHH------HHhh---hCCHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCC
Confidence 34555899999998432 1111 111124577888888877763 23689999999999998888877766
Q ss_pred C---CceEEEEEeCCC
Q psy463 607 S---NVFKCGISVAPV 619 (790)
Q Consensus 607 ~---~~~~~~v~~~~~ 619 (790)
. ..++.+++.+|-
T Consensus 91 ~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 91 AALRARVAQVVLLSPS 106 (192)
T ss_pred HHHHhheeEEEEeccC
Confidence 4 356666666664
No 254
>KOG0265|consensus
Probab=97.76 E-value=0.043 Score=53.03 Aligned_cols=148 Identities=13% Similarity=0.090 Sum_probs=85.9
Q ss_pred CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463 245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS 324 (790)
Q Consensus 245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~ 324 (790)
....++.+.|.-++..+....-+ .+|.+.|+..+.+.-++..- .+.......||+|..+. .-+ -
T Consensus 173 ~kyqltAv~f~d~s~qv~sggId---n~ikvWd~r~~d~~~~lsGh-----~DtIt~lsls~~gs~ll-sns----M--- 236 (338)
T KOG0265|consen 173 NKYQLTAVGFKDTSDQVISGGID---NDIKVWDLRKNDGLYTLSGH-----ADTITGLSLSRYGSFLL-SNS----M--- 236 (338)
T ss_pred cceeEEEEEecccccceeecccc---CceeeeccccCcceEEeecc-----cCceeeEEeccCCCccc-ccc----c---
Confidence 34556789998888744432211 23777787766665555422 22355788999999775 222 1
Q ss_pred CCcCcccEEEEEEcCC---CCcccCCCcccccCC---CeEEe-EEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC
Q psy463 325 TPVDSWDHLTFIDLDD---QAGIKDKVPVPLTRG---RFTVT-EILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT 397 (790)
Q Consensus 325 ~~~~~~~~l~~~d~~~---~~~~~~~~~~~lt~~---~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 397 (790)
-..+.++|..- +++ -..+-.+ .++.. -.-+|||++..+-+.+.+ +.+|+.+..+
T Consensus 237 -----d~tvrvwd~rp~~p~~R-----~v~if~g~~hnfeknlL~cswsp~~~~i~ags~d-----r~vyvwd~~~---- 297 (338)
T KOG0265|consen 237 -----DNTVRVWDVRPFAPSQR-----CVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSAD-----RFVYVWDTTS---- 297 (338)
T ss_pred -----cceEEEEEecccCCCCc-----eEEEeecchhhhhhhcceeeccCCCCcccccccc-----ceEEEeeccc----
Confidence 12566666532 220 0011111 11111 126899999988887766 7888887755
Q ss_pred cceeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463 398 PECITCDLLTSANQKCSYSGATFSTNVSYYVLSC 431 (790)
Q Consensus 398 ~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~ 431 (790)
.+.|.. +++..+.+....|.|....|....
T Consensus 298 r~~lyk----lpGh~gsvn~~~Fhp~e~iils~~ 327 (338)
T KOG0265|consen 298 RRILYK----LPGHYGSVNEVDFHPTEPIILSCS 327 (338)
T ss_pred ccEEEE----cCCcceeEEEeeecCCCcEEEEec
Confidence 122222 344677888899999888664433
No 255
>KOG2314|consensus
Probab=97.74 E-value=0.014 Score=60.98 Aligned_cols=206 Identities=15% Similarity=0.166 Sum_probs=103.7
Q ss_pred CCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEE-EeeeccCCccEEEEe
Q psy463 111 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI-LAWDERENNPLLILS 189 (790)
Q Consensus 111 ~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~-~~~~~~~~~~~~~~~ 189 (790)
..+..|||-+.-|+|++...... -..+.++.+.++.. --|..-++|.+- +.|-..++. +.+.-
T Consensus 349 Ir~FswsP~~~llAYwtpe~~~~--------parvtL~evPs~~~-------iRt~nlfnVsDckLhWQk~gdy-Lcvkv 412 (698)
T KOG2314|consen 349 IRDFSWSPTSNLLAYWTPETNNI--------PARVTLMEVPSKRE-------IRTKNLFNVSDCKLHWQKSGDY-LCVKV 412 (698)
T ss_pred ccCcccCCCcceEEEEcccccCC--------cceEEEEecCccce-------eeeccceeeeccEEEeccCCcE-EEEEE
Confidence 34579999999999998754432 12466666654421 112233344433 455444443 33322
Q ss_pred cc-cCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEe-c
Q psy463 190 HN-QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVN-R 266 (790)
Q Consensus 190 ~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~-r 266 (790)
.. ....-.+ ..+.-+|+++.-.. + |...- .-...+-.++|-|.|. .+..+. .
T Consensus 413 dR~tK~~~~g-~f~n~eIfrireKd-----I--pve~v-----------------elke~vi~FaWEP~gdkF~vi~g~~ 467 (698)
T KOG2314|consen 413 DRHTKSKVKG-QFSNLEIFRIREKD-----I--PVEVV-----------------ELKESVIAFAWEPHGDKFAVISGNT 467 (698)
T ss_pred Eeeccccccc-eEeeEEEEEeeccC-----C--Cceee-----------------ecchheeeeeeccCCCeEEEEEccc
Confidence 21 1111011 12334666664211 1 11111 1123456899999998 433332 2
Q ss_pred cCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccC
Q psy463 267 VQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKD 346 (790)
Q Consensus 267 ~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~ 346 (790)
.....+.|-+....++.+.+..-+.. ......|||.|+.+++.+- ... ...|+.+|.+-..
T Consensus 468 ~k~tvsfY~~e~~~~~~~lVk~~dk~-----~~N~vfwsPkG~fvvva~l----~s~------~g~l~F~D~~~a~---- 528 (698)
T KOG2314|consen 468 VKNTVSFYAVETNIKKPSLVKELDKK-----FANTVFWSPKGRFVVVAAL----VSR------RGDLEFYDTDYAD---- 528 (698)
T ss_pred cccceeEEEeecCCCchhhhhhhccc-----ccceEEEcCCCcEEEEEEe----ccc------ccceEEEecchhh----
Confidence 22334566665444444333222111 1457899999998874432 111 3378999976432
Q ss_pred CCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 347 KVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 347 ~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
.+..............|+|.|+++.-.+..
T Consensus 529 --~k~~~~~eh~~at~veWDPtGRYvvT~ss~ 558 (698)
T KOG2314|consen 529 --LKDTASPEHFAATEVEWDPTGRYVVTSSSS 558 (698)
T ss_pred --hhhccCccccccccceECCCCCEEEEeeeh
Confidence 333222221122237899999977655443
No 256
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.73 E-value=0.0099 Score=58.99 Aligned_cols=211 Identities=12% Similarity=0.040 Sum_probs=114.6
Q ss_pred ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEec--cCcceEEEEEECCCC
Q psy463 204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNR--VQNRARITRCSINEG 281 (790)
Q Consensus 204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r--~~~~~~i~~~~~~~g 281 (790)
..++++|..+|+. +..+. .+...+.+....|||||++++.+.. ....-.|-++|+..+
T Consensus 28 ~~~~v~D~~~g~~-----~~~~~---------------a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~ 87 (305)
T PF07433_consen 28 TFALVFDCRTGQL-----LQRLW---------------APPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARG 87 (305)
T ss_pred cEEEEEEcCCCce-----eeEEc---------------CCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCC
Confidence 5788889988863 22333 1255677889999999997766644 334567899998832
Q ss_pred ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc---CCCC---CcCcccEEEEEEcCCCCcccCCCccc--cc
Q psy463 282 TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES---DGST---PVDSWDHLTFIDLDDQAGIKDKVPVP--LT 353 (790)
Q Consensus 282 ~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~---~g~~---~~~~~~~l~~~d~~~~~~~~~~~~~~--lt 353 (790)
-+++-+-. ..=++ .+...+.|||+.|+ +++-.... .|.. ...=...|.++|..+|+. ..+ |.
T Consensus 88 -~~ri~E~~--s~GIG-PHel~l~pDG~tLv-VANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~l-----l~q~~Lp 157 (305)
T PF07433_consen 88 -YRRIGEFP--SHGIG-PHELLLMPDGETLV-VANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGAL-----LEQVELP 157 (305)
T ss_pred -cEEEeEec--CCCcC-hhhEEEcCCCCEEE-EEcCCCccCcccCceecChhhcCCceEEEecCCCce-----eeeeecC
Confidence 22232211 11122 34789999999998 44311100 1100 000022567777777761 223 32
Q ss_pred C--CCeEEeEEEeeecCCCEEEEEEcC-CCCce--EEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEE
Q psy463 354 R--GRFTVTEILAWDEKENNVYFLSTQ-GSPIV--QHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYV 428 (790)
Q Consensus 354 ~--~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~--~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~ 428 (790)
. ....+.. +++++||. ++|.... +.+.. --|...... ...+.+.........-+..+.++++++++..++
T Consensus 158 ~~~~~lSiRH-La~~~~G~-V~~a~Q~qg~~~~~~PLva~~~~g---~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia 232 (305)
T PF07433_consen 158 PDLHQLSIRH-LAVDGDGT-VAFAMQYQGDPGDAPPLVALHRRG---GALRLLPAPEEQWRRLNGYIGSIAADRDGRLIA 232 (305)
T ss_pred ccccccceee-EEecCCCc-EEEEEecCCCCCccCCeEEEEcCC---CcceeccCChHHHHhhCCceEEEEEeCCCCEEE
Confidence 1 2233444 89999986 5565554 33221 112222221 122222110000000134667899999999988
Q ss_pred EEeecCCCCeEEEEecCCCeEEE
Q psy463 429 LSCIGPGIPEIMLFDKTGQRLLY 451 (790)
Q Consensus 429 ~~~~~~~~~~i~~~~~~~~~~~~ 451 (790)
.++..- ..+.++|.++++...
T Consensus 233 ~tsPrG--g~~~~~d~~tg~~~~ 253 (305)
T PF07433_consen 233 VTSPRG--GRVAVWDAATGRLLG 253 (305)
T ss_pred EECCCC--CEEEEEECCCCCEee
Confidence 875433 467777887776654
No 257
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.72 E-value=0.025 Score=57.49 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=59.4
Q ss_pred EEEEECCCCce-eEEEEEeCCCcccccCCceeEccCCCEEEEEEccc--cccCCCCCcCcccEEEEEEcCCCCcccCCCc
Q psy463 273 ITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHN--QESDGSTPVDSWDHLTFIDLDDQAGIKDKVP 349 (790)
Q Consensus 273 i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~--~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~ 349 (790)
+++++.+++.. +.+........ .....+....|||. |+|..... ....... ..-.||+++..++. .
T Consensus 87 ~~~~~~~~~~~~t~~~~~~~~~~-~~r~ND~~v~pdG~-~wfgt~~~~~~~~~~~~---~~G~lyr~~p~g~~------~ 155 (307)
T COG3386 87 VRLLDPDTGGKITLLAEPEDGLP-LNRPNDGVVDPDGR-IWFGDMGYFDLGKSEER---PTGSLYRVDPDGGV------V 155 (307)
T ss_pred cEEEeccCCceeEEeccccCCCC-cCCCCceeEcCCCC-EEEeCCCccccCccccC---CcceEEEEcCCCCE------E
Confidence 56666665555 44443322111 12244788899987 55555420 0011100 02369999975553 4
Q ss_pred ccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC
Q psy463 350 VPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA 392 (790)
Q Consensus 350 ~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 392 (790)
+.+ .+...+..-++||||++.+|++-+.. ..|++++++
T Consensus 156 ~l~-~~~~~~~NGla~SpDg~tly~aDT~~----~~i~r~~~d 193 (307)
T COG3386 156 RLL-DDDLTIPNGLAFSPDGKTLYVADTPA----NRIHRYDLD 193 (307)
T ss_pred Eee-cCcEEecCceEECCCCCEEEEEeCCC----CeEEEEecC
Confidence 444 44344555589999999999987663 578888775
No 258
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=97.70 E-value=0.0049 Score=66.94 Aligned_cols=133 Identities=15% Similarity=0.137 Sum_probs=83.7
Q ss_pred cEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcc-ccccccccchHHHHHhcCCeEEEEEcCCCCCCCh----hhhH--h
Q psy463 481 MEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSF-QVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG----NTLK--Y 553 (790)
Q Consensus 481 ~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g----~~~~--~ 553 (790)
..|...+++|.++. ++ ++.+ |+++-. .+............+ ++||+++.-|- |+.+.. ..|. .
T Consensus 15 ~~i~fev~LP~~WN---gR----~~~~-GgGG~~G~i~~~~~~~~~~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~ 84 (474)
T PF07519_consen 15 PNIRFEVWLPDNWN---GR----FLQV-GGGGFAGGINYADGKASMATAL-ARGYATASTDS-GHQGSAGSDDASFGNNP 84 (474)
T ss_pred ceEEEEEECChhhc---cC----eEEE-CCCeeeCcccccccccccchhh-hcCeEEEEecC-CCCCCcccccccccCCH
Confidence 37888899999765 22 2333 433321 111111000022233 48999999995 443321 1121 1
Q ss_pred hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCccc
Q psy463 554 AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIY 624 (790)
Q Consensus 554 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~ 624 (790)
....+++...+.+...+.+.+++.+-...+++-...|.|-||--++..|.++|+ .|.++++.+|..+|..
T Consensus 85 ~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~-dfDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 85 EALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPE-DFDGILAGAPAINWTH 154 (474)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChh-hcCeEEeCCchHHHHH
Confidence 112344445566666677777765444667889999999999999999999996 9999999999988754
No 259
>KOG1274|consensus
Probab=97.69 E-value=0.021 Score=63.32 Aligned_cols=188 Identities=19% Similarity=0.232 Sum_probs=105.2
Q ss_pred cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463 114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE 193 (790)
Q Consensus 114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (790)
..++-+|+.+++-++.- -|-++++++.. ....+-..+.++.. +.++|++. ++-++.
T Consensus 102 ~~v~g~g~~iaagsdD~-------------~vK~~~~~D~s-----~~~~lrgh~apVl~-l~~~p~~~--fLAvss--- 157 (933)
T KOG1274|consen 102 LAVSGSGKMIAAGSDDT-------------AVKLLNLDDSS-----QEKVLRGHDAPVLQ-LSYDPKGN--FLAVSS--- 157 (933)
T ss_pred EEEecCCcEEEeecCce-------------eEEEEeccccc-----hheeecccCCceee-eeEcCCCC--EEEEEe---
Confidence 48899999999755311 45566665543 12222233334433 36677654 332222
Q ss_pred CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceE
Q psy463 194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRAR 272 (790)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~ 272 (790)
..+.|+.++++++... ..++. ..- .+..........++|+|+|. +++...++.
T Consensus 158 --------~dG~v~iw~~~~~~~~-----~tl~~--v~k-------~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~---- 211 (933)
T KOG1274|consen 158 --------CDGKVQIWDLQDGILS-----KTLTG--VDK-------DNEFILSRICTRLAWHPKGGTLAVPPVDNT---- 211 (933)
T ss_pred --------cCceEEEEEcccchhh-----hhccc--CCc-------cccccccceeeeeeecCCCCeEEeeccCCe----
Confidence 2268888888876532 22220 000 00001245678999999966 666655544
Q ss_pred EEEEECCCCceeEEEEE-eCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463 273 ITRCSINEGTCDVVFSR-DLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP 351 (790)
Q Consensus 273 i~~~~~~~g~~~~l~~~-~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 351 (790)
+.+++.++.+..-.+.. .... .+....|||.|++|+ ... .+| +|.++|+++-+ .
T Consensus 212 Vkvy~r~~we~~f~Lr~~~~ss----~~~~~~wsPnG~YiA-As~----~~g--------~I~vWnv~t~~------~-- 266 (933)
T KOG1274|consen 212 VKVYSRKGWELQFKLRDKLSSS----KFSDLQWSPNGKYIA-AST----LDG--------QILVWNVDTHE------R-- 266 (933)
T ss_pred EEEEccCCceeheeeccccccc----ceEEEEEcCCCcEEe-eec----cCC--------cEEEEecccch------h--
Confidence 88888888765432221 1111 144789999999998 333 455 78999987633 1
Q ss_pred ccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 352 LTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 352 lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
.......-..+|-|+...|-+....
T Consensus 267 --~~~~~~Vc~~aw~p~~n~it~~~~~ 291 (933)
T KOG1274|consen 267 --HEFKRAVCCEAWKPNANAITLITAL 291 (933)
T ss_pred --ccccceeEEEecCCCCCeeEEEeec
Confidence 1111112226788887777666555
No 260
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.68 E-value=0.00036 Score=70.96 Aligned_cols=88 Identities=16% Similarity=0.106 Sum_probs=58.2
Q ss_pred HHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC
Q psy463 527 YLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP 606 (790)
Q Consensus 527 ~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p 606 (790)
.++.++|..|+.++.++-...-. ...+..+..+.+..+++.+++..+ .++|-++|+|.||.++..++...+
T Consensus 133 ~~l~~~g~~vfvIsw~nPd~~~~------~~~~edYi~e~l~~aid~v~~itg---~~~InliGyCvGGtl~~~ala~~~ 203 (445)
T COG3243 133 RWLLEQGLDVFVISWRNPDASLA------AKNLEDYILEGLSEAIDTVKDITG---QKDINLIGYCVGGTLLAAALALMA 203 (445)
T ss_pred HHHHHcCCceEEEeccCchHhhh------hccHHHHHHHHHHHHHHHHHHHhC---ccccceeeEecchHHHHHHHHhhh
Confidence 44455999999999876432111 111222333566677777776322 378999999999999999988888
Q ss_pred CCceEEEEEeCCCCCcc
Q psy463 607 SNVFKCGISVAPVTDWI 623 (790)
Q Consensus 607 ~~~~~~~v~~~~~~~~~ 623 (790)
.++++.+.......|+.
T Consensus 204 ~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 204 AKRIKSLTLLTSPVDFS 220 (445)
T ss_pred hcccccceeeecchhhc
Confidence 75577666665554543
No 261
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.66 E-value=0.00027 Score=70.78 Aligned_cols=113 Identities=18% Similarity=0.159 Sum_probs=70.6
Q ss_pred ccEEEEEcCCCCccccccccccchHHHHHhc--CCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHH----HHHHH
Q psy463 501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADN--KDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQIN----VTRYL 574 (790)
Q Consensus 501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~--~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~----~~~~l 574 (790)
.++++++-|.||... |...|...+... ..+.|+.+.+.|+......- ..........++|+++ .++.+
T Consensus 2 ~~li~~IPGNPGlv~----fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~--~~~~~~~~~sL~~QI~hk~~~i~~~ 75 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE----FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNS--KFSPNGRLFSLQDQIEHKIDFIKEL 75 (266)
T ss_pred cEEEEEECCCCChHH----HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccc--cccCCCCccCHHHHHHHHHHHHHHH
Confidence 468999999999743 233344444432 57899999999876533220 0001122244555543 33333
Q ss_pred HHhCCCcCCCceEEEEechHHHHHHHHHhcCC--CCceEEEEEeCCCC
Q psy463 575 QENLPYIDKTRTAIWGWSYGGYATGLALALDP--SNVFKCGISVAPVT 620 (790)
Q Consensus 575 ~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p--~~~~~~~v~~~~~~ 620 (790)
..... ....++.++|||.|+|+++.++.+.+ ...++.++...|..
T Consensus 76 ~~~~~-~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 76 IPQKN-KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhhhc-CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 33111 14578999999999999999999988 34677777777754
No 262
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=97.65 E-value=0.0031 Score=62.71 Aligned_cols=109 Identities=19% Similarity=0.217 Sum_probs=62.8
Q ss_pred CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463 9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC 88 (790)
Q Consensus 9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~ 88 (790)
...++++||||+.+||++..++...+|..+..+.. ...++........|.+++. .|.............
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~---------~~~~~g~~l~~PS~d~~g~--~W~v~~~~~~~~~~~ 93 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPV---------RPVLTGGSLTRPSWDPDGW--VWTVDDGSGGVRVVR 93 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcc---------eeeccCCccccccccCCCC--EEEEEcCCCceEEEE
Confidence 46789999999999999977788889999876653 1111223444566766533 454433222212121
Q ss_pred eCCCCeeeEEEeecCCCCccc-cCCccccccCCceEEEEeecCC
Q psy463 89 SINEGTCDVVFSRDLDRGWFE-PFDHLRFSSDGKKMLLILSHNQ 131 (790)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~i~~~~~~~~ 131 (790)
+..++....+... ..+.. .....++||||.+++++....+
T Consensus 94 ~~~~g~~~~~~v~---~~~~~~~I~~l~vSpDG~RvA~v~~~~~ 134 (253)
T PF10647_consen 94 DSASGTGEPVEVD---WPGLRGRITALRVSPDGTRVAVVVEDGG 134 (253)
T ss_pred ecCCCcceeEEec---ccccCCceEEEEECCCCcEEEEEEecCC
Confidence 2222322221111 11111 2345789999999999986544
No 263
>KOG0296|consensus
Probab=97.64 E-value=0.0042 Score=61.24 Aligned_cols=81 Identities=12% Similarity=0.186 Sum_probs=55.7
Q ss_pred EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc
Q psy463 273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL 352 (790)
Q Consensus 273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l 352 (790)
|.++|++..+.|.+...+.. .-...|-+ .+.|+ ++. .+| .|+.+|+.+|. .....
T Consensus 310 i~iyD~a~~~~R~~c~he~~------V~~l~w~~-t~~l~-t~c----~~g--------~v~~wDaRtG~-----l~~~y 364 (399)
T KOG0296|consen 310 IAIYDLAASTLRHICEHEDG------VTKLKWLN-TDYLL-TAC----ANG--------KVRQWDARTGQ-----LKFTY 364 (399)
T ss_pred EEEEecccchhheeccCCCc------eEEEEEcC-cchhe-eec----cCc--------eEEeeeccccc-----eEEEE
Confidence 88888888887777665421 34677877 45555 554 567 79999999887 23446
Q ss_pred cCCCeEEeEEEeeecCCCEEEEEEcCC
Q psy463 353 TRGRFTVTEILAWDEKENNVYFLSTQG 379 (790)
Q Consensus 353 t~~~~~~~~~~~~s~dg~~l~~~~~~~ 379 (790)
+.+...+.. ++.+||++.|+-.+.++
T Consensus 365 ~GH~~~Il~-f~ls~~~~~vvT~s~D~ 390 (399)
T KOG0296|consen 365 TGHQMGILD-FALSPQKRLVVTVSDDN 390 (399)
T ss_pred ecCchheeE-EEEcCCCcEEEEecCCC
Confidence 666666665 77899998776666554
No 264
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.64 E-value=0.15 Score=55.53 Aligned_cols=204 Identities=16% Similarity=0.195 Sum_probs=118.7
Q ss_pred ccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCc--ceEEEEEECC
Q psy463 202 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQN--RARITRCSIN 279 (790)
Q Consensus 202 ~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~--~~~i~~~~~~ 279 (790)
.+..|-+.|+.+|+-. +..++ .....+.|.+||+.++++....+ ...++...+.
T Consensus 153 e~y~lr~kdL~tg~~~----~d~i~--------------------~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~g 208 (682)
T COG1770 153 EQYTLRFKDLATGEEL----PDEIT--------------------NTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLG 208 (682)
T ss_pred cEEEEEEEeccccccc----chhhc--------------------ccccceEEecCCCeEEEEEEcCCCCcceEEEEecC
Confidence 3456777788887632 22222 22457899999997776654433 3468888888
Q ss_pred C--CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCe
Q psy463 280 E--GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF 357 (790)
Q Consensus 280 ~--g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~ 357 (790)
+ ...+.|+++....-++ ...=|...++|++..+ ..- ..++++++++..+. .++.+.....
T Consensus 209 t~~~~d~lvyeE~d~~f~~----~v~~s~s~~yi~i~~~----~~~------tsE~~ll~a~~p~~----~p~vv~pr~~ 270 (682)
T COG1770 209 TPGSSDELVYEEKDDRFFL----SVGRSRSEAYIVISLG----SHI------TSEVRLLDADDPEA----EPKVVLPREN 270 (682)
T ss_pred CCCCcceEEEEcCCCcEEE----EeeeccCCceEEEEcC----CCc------ceeEEEEecCCCCC----ceEEEEEcCC
Confidence 7 5556666654322122 2334666777775443 112 45788988765330 1344433222
Q ss_pred EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC-CCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCC
Q psy463 358 TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA-DPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGI 436 (790)
Q Consensus 358 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~ 436 (790)
.+. .....-+..+|+.++... ...+|++..+. ++......+++ .....--.++-=..+++..+...+.
T Consensus 271 g~e--Y~~eh~~d~f~i~sN~~g-knf~l~~ap~~~~~~~w~~~I~h--------~~~~~l~~~~~f~~~lVl~eR~~gl 339 (682)
T COG1770 271 GVE--YSVEHGGDRFYILSNADG-KNFKLVRAPVSADKSNWRELIPH--------REDVRLEGVDLFADHLVLLERQEGL 339 (682)
T ss_pred CcE--EeeeecCcEEEEEecCCC-cceEEEEccCCCChhcCeeeecc--------CCCceeeeeeeeccEEEEEecccCC
Confidence 222 233444778888888844 45889888771 11112233333 1122223445556789898888889
Q ss_pred CeEEEEecCCCeEEEeccchhH
Q psy463 437 PEIMLFDKTGQRLLYWDTNEDL 458 (790)
Q Consensus 437 ~~i~~~~~~~~~~~~l~~~~~~ 458 (790)
|.|++.+..++....|..++..
T Consensus 340 p~v~v~~~~~~~~~~i~f~~~a 361 (682)
T COG1770 340 PRVVVRDRKTGEERGIAFDDEA 361 (682)
T ss_pred ceEEEEecCCCceeeEEecchh
Confidence 9999999887666556555443
No 265
>KOG0772|consensus
Probab=97.64 E-value=0.0039 Score=64.21 Aligned_cols=122 Identities=16% Similarity=0.186 Sum_probs=65.5
Q ss_pred CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
...++.++||+||++++.-..+. .+-++|+..-+.-........+.+ ...+..||||.+-|+ +... ...|.
T Consensus 364 g~~Itsi~FS~dg~~LlSRg~D~---tLKvWDLrq~kkpL~~~tgL~t~~--~~tdc~FSPd~kli~-TGtS--~~~~~- 434 (641)
T KOG0772|consen 364 GQDITSISFSYDGNYLLSRGFDD---TLKVWDLRQFKKPLNVRTGLPTPF--PGTDCCFSPDDKLIL-TGTS--APNGM- 434 (641)
T ss_pred CCceeEEEeccccchhhhccCCC---ceeeeeccccccchhhhcCCCccC--CCCccccCCCceEEE-eccc--ccCCC-
Confidence 34678999999999655432222 277777765322211111111111 135789999988554 5542 12221
Q ss_pred CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEE
Q psy463 326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYR 388 (790)
Q Consensus 326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 388 (790)
+...|+++|..+=+ .+..|--....+.. ..|.|.=+.|+..+.+|. .++|.
T Consensus 435 ---~~g~L~f~d~~t~d-----~v~ki~i~~aSvv~-~~WhpkLNQi~~gsgdG~---~~vyY 485 (641)
T KOG0772|consen 435 ---TAGTLFFFDRMTLD-----TVYKIDISTASVVR-CLWHPKLNQIFAGSGDGT---AHVYY 485 (641)
T ss_pred ---CCceEEEEecccee-----eEEEecCCCceEEE-EeecchhhheeeecCCCc---eEEEE
Confidence 13468888865433 12222222233443 679988777777666654 56654
No 266
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.63 E-value=0.022 Score=58.99 Aligned_cols=195 Identities=12% Similarity=0.186 Sum_probs=94.6
Q ss_pred cccccCC--ceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEE-EeeeccCCccEEEEec
Q psy463 114 LRFSSDG--KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI-LAWDERENNPLLILSH 190 (790)
Q Consensus 114 ~~~spdg--~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~-~~~~~~~~~~~~~~~~ 190 (790)
-.|||.| ..|+|+.....+... .+.++.+..+. .-.|..-+.+... +.|...++-+++-+-.
T Consensus 179 FsisP~~n~~~la~~tPEk~~kpa--------~~~i~sIp~~s-------~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t 243 (561)
T COG5354 179 FSISPEGNHDELAYWTPEKLNKPA--------MVRILSIPKNS-------VLVTKNLFKVSGVQLKWQVLGKYLLVLVMT 243 (561)
T ss_pred EEecCCCCCceEEEEccccCCCCc--------EEEEEEccCCC-------eeeeeeeEeecccEEEEecCCceEEEEEEE
Confidence 4778864 558888776554333 44444443332 1112222233332 4555555543322222
Q ss_pred ccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCc
Q psy463 191 NQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQN 269 (790)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~ 269 (790)
.... ..-....++||++.+..... +..+ .-.+.+.+++|+|+++ .+... .-.
T Consensus 244 ~~ks--nKsyfgesnLyl~~~~e~~i-----~V~~------------------~~~~pVhdf~W~p~S~~F~vi~-g~~- 296 (561)
T COG5354 244 HTKS--NKSYFGESNLYLLRITERSI-----PVEK------------------DLKDPVHDFTWEPLSSRFAVIS-GYM- 296 (561)
T ss_pred eeec--ccceeccceEEEEeeccccc-----ceec------------------cccccceeeeecccCCceeEEe-ccc-
Confidence 1111 11112237889888874321 1110 1134578899999999 33333 111
Q ss_pred ceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCc
Q psy463 270 RARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP 349 (790)
Q Consensus 270 ~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~ 349 (790)
...+...++.+. .+-..-+.. -..+.|||.+++|++ +..+ .. ...+-++|..+.-
T Consensus 297 pa~~s~~~lr~N-l~~~~Pe~~-------rNT~~fsp~~r~il~-agF~-nl--------~gni~i~~~~~rf------- 351 (561)
T COG5354 297 PASVSVFDLRGN-LRFYFPEQK-------RNTIFFSPHERYILF-AGFD-NL--------QGNIEIFDPAGRF------- 351 (561)
T ss_pred ccceeecccccc-eEEecCCcc-------cccccccCcccEEEE-ecCC-cc--------ccceEEeccCCce-------
Confidence 112555555544 222111111 236889999999884 3321 12 3367778876542
Q ss_pred ccccCCCeEEeEEEeeecCCCEEEEE
Q psy463 350 VPLTRGRFTVTEILAWDEKENNVYFL 375 (790)
Q Consensus 350 ~~lt~~~~~~~~~~~~s~dg~~l~~~ 375 (790)
..++.-...-.....|+||+..++..
T Consensus 352 ~~~~~~~~~n~s~~~wspd~qF~~~~ 377 (561)
T COG5354 352 KVAGAFNGLNTSYCDWSPDGQFYDTD 377 (561)
T ss_pred EEEEEeecCCceEeeccCCceEEEec
Confidence 22221111112336799999854443
No 267
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.60 E-value=0.0019 Score=57.61 Aligned_cols=59 Identities=17% Similarity=0.134 Sum_probs=47.8
Q ss_pred CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC----cchHHHHHHHHHHHHh
Q psy463 725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG----VRPHFYHTLERFLDSC 788 (790)
Q Consensus 725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~----~~~~~~~~i~~fl~~~ 788 (790)
.-|.++++..+|+.|+++.++.+.+++.. .++....+||.... ...+.+..+.+|+.+.
T Consensus 117 pfps~vvaSrnDp~~~~~~a~~~a~~wgs-----~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~~ 179 (181)
T COG3545 117 PFPSVVVASRNDPYVSYEHAEDLANAWGS-----ALVDVGEGGHINAESGFGPWPEGYALLAQLLSRA 179 (181)
T ss_pred CCceeEEEecCCCCCCHHHHHHHHHhccH-----hheecccccccchhhcCCCcHHHHHHHHHHhhhh
Confidence 57999999999999999999999998865 56777888896543 6677777777777543
No 268
>PTZ00421 coronin; Provisional
Probab=97.60 E-value=0.0066 Score=66.37 Aligned_cols=166 Identities=13% Similarity=0.117 Sum_probs=95.4
Q ss_pred CCCCEEEEEEEcc-CCcEEEEEeccCcceEEEEEECCCCce-----eEEEEEeCCCcccccCCceeEccCCCEEEEEEcc
Q psy463 244 NVEPVLSRVNWAN-ESVVAAWVNRVQNRARITRCSINEGTC-----DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSH 317 (790)
Q Consensus 244 ~~~~~~~~~~wsp-Dg~~~~~~~r~~~~~~i~~~~~~~g~~-----~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~ 317 (790)
.....+..+.|+| |+++++....+. .|.++++.++.. ..+..-.+.. .......|+|++..++++.+
T Consensus 73 GH~~~V~~v~fsP~d~~~LaSgS~Dg---tIkIWdi~~~~~~~~~~~~l~~L~gH~---~~V~~l~f~P~~~~iLaSgs- 145 (493)
T PTZ00421 73 GQEGPIIDVAFNPFDPQKLFTASEDG---TIMGWGIPEEGLTQNISDPIVHLQGHT---KKVGIVSFHPSAMNVLASAG- 145 (493)
T ss_pred CCCCCEEEEEEcCCCCCEEEEEeCCC---EEEEEecCCCccccccCcceEEecCCC---CcEEEEEeCcCCCCEEEEEe-
Confidence 4456688999999 888555554432 277777765421 1122111111 12346899999765554555
Q ss_pred ccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC
Q psy463 318 NQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT 397 (790)
Q Consensus 318 ~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 397 (790)
.++ .|.++|+.+++ ....+..+...+.. ++|+|||+.|+..+.+ ..|...++.. ++
T Consensus 146 ---~Dg--------tVrIWDl~tg~-----~~~~l~~h~~~V~s-la~spdG~lLatgs~D-----g~IrIwD~rs--g~ 201 (493)
T PTZ00421 146 ---ADM--------VVNVWDVERGK-----AVEVIKCHSDQITS-LEWNLDGSLLCTTSKD-----KKLNIIDPRD--GT 201 (493)
T ss_pred ---CCC--------EEEEEECCCCe-----EEEEEcCCCCceEE-EEEECCCCEEEEecCC-----CEEEEEECCC--Cc
Confidence 455 68899998776 13344444444554 8899999977665554 4555666654 32
Q ss_pred c-ceeeecccccCCCcccEEEEEEecCCcEEEEEeec-CCCCeEEEEecCC
Q psy463 398 P-ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIG-PGIPEIMLFDKTG 446 (790)
Q Consensus 398 ~-~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~-~~~~~i~~~~~~~ 446 (790)
. ..+.. + .........|++++..++..... ..-..|.++|+..
T Consensus 202 ~v~tl~~-----H-~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~ 246 (493)
T PTZ00421 202 IVSSVEA-----H-ASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRK 246 (493)
T ss_pred EEEEEec-----C-CCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCC
Confidence 2 11211 0 11123456788887776544322 2256788888865
No 269
>KOG2139|consensus
Probab=97.59 E-value=0.0042 Score=61.17 Aligned_cols=113 Identities=18% Similarity=0.310 Sum_probs=72.7
Q ss_pred cCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccccc-CCCeEEeEEEeeecCCCEEEEEE
Q psy463 298 PFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT-RGRFTVTEILAWDEKENNVYFLS 376 (790)
Q Consensus 298 ~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt-~~~~~~~~~~~~s~dg~~l~~~~ 376 (790)
+..+..|.+||..++ .++ .| -.+|.++|++++. ..+|. .+...+. .+.|||||.+++-.+
T Consensus 197 pVtsmqwn~dgt~l~-tAS-----~g------sssi~iWdpdtg~------~~pL~~~glgg~s-lLkwSPdgd~lfaAt 257 (445)
T KOG2139|consen 197 PVTSMQWNEDGTILV-TAS-----FG------SSSIMIWDPDTGQ------KIPLIPKGLGGFS-LLKWSPDGDVLFAAT 257 (445)
T ss_pred eeeEEEEcCCCCEEe-ecc-----cC------cceEEEEcCCCCC------cccccccCCCcee-eEEEcCCCCEEEEec
Confidence 356899999999887 555 34 4589999999887 55554 3333333 388999999765555
Q ss_pred cCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEec
Q psy463 377 TQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDK 444 (790)
Q Consensus 377 ~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~ 444 (790)
-++. ..||--.- . ...++-.. +.+.+....|||+|++++|++.+.. .+|-...
T Consensus 258 ~dav---frlw~e~q-~--wt~erw~l-------gsgrvqtacWspcGsfLLf~~sgsp--~lysl~f 310 (445)
T KOG2139|consen 258 CDAV---FRLWQENQ-S--WTKERWIL-------GSGRVQTACWSPCGSFLLFACSGSP--RLYSLTF 310 (445)
T ss_pred ccce---eeeehhcc-c--ceecceec-------cCCceeeeeecCCCCEEEEEEcCCc--eEEEEee
Confidence 4433 55652211 1 11222222 3447788999999999999987653 4554443
No 270
>KOG0645|consensus
Probab=97.58 E-value=0.0091 Score=56.62 Aligned_cols=154 Identities=15% Similarity=0.217 Sum_probs=90.0
Q ss_pred CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
...+.+++|||.|++++..+-+.. ..+..-..++-..+...++... -.-..+||++|..|+ +.+ ++.
T Consensus 61 krsVRsvAwsp~g~~La~aSFD~t---~~Iw~k~~~efecv~~lEGHEn---EVK~Vaws~sG~~LA-TCS----RDK-- 127 (312)
T KOG0645|consen 61 KRSVRSVAWSPHGRYLASASFDAT---VVIWKKEDGEFECVATLEGHEN---EVKCVAWSASGNYLA-TCS----RDK-- 127 (312)
T ss_pred hheeeeeeecCCCcEEEEeeccce---EEEeecCCCceeEEeeeecccc---ceeEEEEcCCCCEEE-Eee----CCC--
Confidence 345789999999997776665432 2233333444333433332111 145799999999999 777 333
Q ss_pred CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecc
Q psy463 326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDL 405 (790)
Q Consensus 326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~ 405 (790)
-+|++..+.+.+.. ....|+.+.-++.. ..|.|... |.|.....+ ...+|+-..++ .-+|+-.
T Consensus 128 ------SVWiWe~deddEfe--c~aVL~~HtqDVK~-V~WHPt~d-lL~S~SYDn--TIk~~~~~~dd---dW~c~~t-- 190 (312)
T KOG0645|consen 128 ------SVWIWEIDEDDEFE--CIAVLQEHTQDVKH-VIWHPTED-LLFSCSYDN--TIKVYRDEDDD---DWECVQT-- 190 (312)
T ss_pred ------eEEEEEecCCCcEE--EEeeeccccccccE-EEEcCCcc-eeEEeccCC--eEEEEeecCCC---CeeEEEE--
Confidence 47777776544111 12346666556666 78999755 566655532 26777765422 2222221
Q ss_pred cccCCCcccEEEEEEecCCcEEEEEe
Q psy463 406 LTSANQKCSYSGATFSTNVSYYVLSC 431 (790)
Q Consensus 406 ~~~~~~~~~~~~~~~s~dg~~~~~~~ 431 (790)
+.+....+....|.+.|..++-..
T Consensus 191 --l~g~~~TVW~~~F~~~G~rl~s~s 214 (312)
T KOG0645|consen 191 --LDGHENTVWSLAFDNIGSRLVSCS 214 (312)
T ss_pred --ecCccceEEEEEecCCCceEEEec
Confidence 112344677889999998775443
No 271
>KOG1282|consensus
Probab=97.57 E-value=0.0026 Score=67.33 Aligned_cols=139 Identities=17% Similarity=0.189 Sum_probs=81.4
Q ss_pred CCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCcccccccccc--chH-----------HHHHhcCCeEEEEEcCC-C
Q psy463 478 QPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSV--DWN-----------LYLADNKDIVVAYIDGR-N 543 (790)
Q Consensus 478 ~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~--~~~-----------~~~~~~~G~~v~~~d~r-G 543 (790)
..+..+.+|.+.-.. .....|+|+++-||||...+...+.. .+. .+-.. +-..++..|.+ |
T Consensus 54 ~~~~~LFYwf~eS~~----~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWn-k~aNiLfLd~PvG 128 (454)
T KOG1282|consen 54 SEGRQLFYWFFESEN----NPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWN-KEANILFLDQPVG 128 (454)
T ss_pred CCCceEEEEEEEccC----CCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCcccc-ccccEEEEecCCc
Confidence 357899999987653 34567999999999998654321110 000 00011 12247788876 4
Q ss_pred CCCChhhhHhhhhccCCccchhHHHHHHH-HHHHhCCCcCCCceEEEEechHHHHH----HHHHhcC-----CCCceEEE
Q psy463 544 SALKGNTLKYAGYRRLGTVEIYDQINVTR-YLQENLPYIDKTRTAIWGWSYGGYAT----GLALALD-----PSNVFKCG 613 (790)
Q Consensus 544 ~~~~g~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~~d~~ri~i~G~S~GG~~a----~~~a~~~-----p~~~~~~~ 613 (790)
.|. .-.-.......-....+.|...++. |+. ++|..-.+.+.|.|-||+|... ..+.... |.-.+++.
T Consensus 129 vGF-SYs~~~~~~~~~D~~~A~d~~~FL~~wf~-kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~ 206 (454)
T KOG1282|consen 129 VGF-SYSNTSSDYKTGDDGTAKDNYEFLQKWFE-KFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGY 206 (454)
T ss_pred CCc-cccCCCCcCcCCcHHHHHHHHHHHHHHHH-hChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEE
Confidence 332 2111111111111234566655554 555 4888878899999999999554 4443332 22367899
Q ss_pred EEeCCCCCcc
Q psy463 614 ISVAPVTDWI 623 (790)
Q Consensus 614 v~~~~~~~~~ 623 (790)
+.+.|+++..
T Consensus 207 ~IGNg~td~~ 216 (454)
T KOG1282|consen 207 AIGNGLTDPE 216 (454)
T ss_pred EecCcccCcc
Confidence 9999998754
No 272
>KOG2096|consensus
Probab=97.56 E-value=0.024 Score=55.08 Aligned_cols=156 Identities=10% Similarity=0.041 Sum_probs=83.0
Q ss_pred EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463 250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS 329 (790)
Q Consensus 250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~ 329 (790)
-+....-.++++...+.+. .|.++++.+.-...+...... ....+.||||+.|+. +..
T Consensus 191 i~iGiA~~~k~imsas~dt---~i~lw~lkGq~L~~idtnq~~------n~~aavSP~GRFia~-~gF------------ 248 (420)
T KOG2096|consen 191 INIGIAGNAKYIMSASLDT---KICLWDLKGQLLQSIDTNQSS------NYDAAVSPDGRFIAV-SGF------------ 248 (420)
T ss_pred EEEeecCCceEEEEecCCC---cEEEEecCCceeeeecccccc------ccceeeCCCCcEEEE-ecC------------
Confidence 3455555666665554433 388888885544444433221 347899999998873 321
Q ss_pred ccEEEEEEc---CCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC-cceeeecc
Q psy463 330 WDHLTFIDL---DDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT-PECITCDL 405 (790)
Q Consensus 330 ~~~l~~~d~---~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~~~ 405 (790)
..++.++.+ ..|+.-+....-+|..+.-.+.. ++||+++.+++-.+.+|. .+||-.++.-..++ ++.|-..-
T Consensus 249 TpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~-~aFsn~S~r~vtvSkDG~---wriwdtdVrY~~~qDpk~Lk~g~ 324 (420)
T KOG2096|consen 249 TPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLA-AAFSNSSTRAVTVSKDGK---WRIWDTDVRYEAGQDPKILKEGS 324 (420)
T ss_pred CCCceEEEEEeccCcchhhhhhhheeccchhheee-eeeCCCcceeEEEecCCc---EEEeeccceEecCCCchHhhcCC
Confidence 113334332 12220000012234444444444 889999999988888776 88888776431121 22221110
Q ss_pred cccCCCcccEEEEEEecCCcEEEEEe
Q psy463 406 LTSANQKCSYSGATFSTNVSYYVLSC 431 (790)
Q Consensus 406 ~~~~~~~~~~~~~~~s~dg~~~~~~~ 431 (790)
..+......--...+||.|+.++.+.
T Consensus 325 ~pl~aag~~p~RL~lsP~g~~lA~s~ 350 (420)
T KOG2096|consen 325 APLHAAGSEPVRLELSPSGDSLAVSF 350 (420)
T ss_pred cchhhcCCCceEEEeCCCCcEEEeec
Confidence 00000112223688999999988764
No 273
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.54 E-value=0.06 Score=64.89 Aligned_cols=170 Identities=14% Similarity=0.089 Sum_probs=88.5
Q ss_pred EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEe------CCC---cccccCCceeEccCCCEEEEEEccccc
Q psy463 250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRD------LDR---GWFEPFDHLRFSSDGKKMLLILSHNQE 320 (790)
Q Consensus 250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~------~~~---~~~~~~~~~~~spDg~~i~~~~~~~~~ 320 (790)
..++++|++..++.++... .+|++++..++....+.... +.. .-......++++|||+.|++.-+
T Consensus 686 ~gVa~dp~~g~LyVad~~~--~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs---- 759 (1057)
T PLN02919 686 WDVCFEPVNEKVYIAMAGQ--HQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADS---- 759 (1057)
T ss_pred eEEEEecCCCeEEEEECCC--CeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEEC----
Confidence 3678999665444443322 23888888877665432110 000 00111235889999998874333
Q ss_pred cCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCC---------------------eEEeEEEeeecCCCEEEEEEcCC
Q psy463 321 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR---------------------FTVTEILAWDEKENNVYFLSTQG 379 (790)
Q Consensus 321 ~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~---------------------~~~~~~~~~s~dg~~l~~~~~~~ 379 (790)
+ ...|.++|++++. ...+..+. ......+++++||+ ||+....
T Consensus 760 --~------n~~Irv~D~~tg~------~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~-LYVADs~- 823 (1057)
T PLN02919 760 --E------SSSIRALDLKTGG------SRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ-IYVADSY- 823 (1057)
T ss_pred --C------CCeEEEEECCCCc------EEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc-EEEEECC-
Confidence 2 2478899987654 22111000 00111267889987 5555433
Q ss_pred CCceEEEEEEEcCCCCCCcceeeec-ccc------cCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463 380 SPIVQHMYRINIADPTATPECITCD-LLT------SANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL 449 (790)
Q Consensus 380 ~~~~~~l~~~~~~~~~~~~~~lt~~-~~~------~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~ 449 (790)
+ ..|.+++.++ +....+... ... ....-..-..+.++++|+.++. + .....|.++++++++.
T Consensus 824 N---~rIrviD~~t--g~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVa--D-t~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 824 N---HKIKKLDPAT--KRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVA--D-TNNSLIRYLDLNKGEA 892 (1057)
T ss_pred C---CEEEEEECCC--CeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEE--E-CCCCEEEEEECCCCcc
Confidence 2 4678888765 333322210 000 0000112346789999974332 2 2245688888877543
No 274
>KOG0305|consensus
Probab=97.53 E-value=0.036 Score=58.93 Aligned_cols=155 Identities=10% Similarity=0.024 Sum_probs=94.4
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce-eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD 322 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~ 322 (790)
.....+....|++||++++.- .+...+++.|....+. ..+..... .+-..+|+|=-+.|+.+..
T Consensus 299 ~H~qeVCgLkws~d~~~lASG---gnDN~~~Iwd~~~~~p~~~~~~H~a------AVKA~awcP~q~~lLAsGG------ 363 (484)
T KOG0305|consen 299 GHRQEVCGLKWSPDGNQLASG---GNDNVVFIWDGLSPEPKFTFTEHTA------AVKALAWCPWQSGLLATGG------ 363 (484)
T ss_pred cccceeeeeEECCCCCeeccC---CCccceEeccCCCccccEEEeccce------eeeEeeeCCCccCceEEcC------
Confidence 445567889999999976543 2334488887744332 33333221 1457899998877763433
Q ss_pred CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463 323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT 402 (790)
Q Consensus 323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt 402 (790)
|.. -..|..+|..+|+ ....+-.+ -.|.. +.|++..+.|+.+-.... ....||.+..-. ....++
T Consensus 364 Gs~----D~~i~fwn~~~g~-----~i~~vdtg-sQVcs-L~Wsk~~kEi~sthG~s~-n~i~lw~~ps~~---~~~~l~ 428 (484)
T KOG0305|consen 364 GSA----DRCIKFWNTNTGA-----RIDSVDTG-SQVCS-LIWSKKYKELLSTHGYSE-NQITLWKYPSMK---LVAELL 428 (484)
T ss_pred CCc----ccEEEEEEcCCCc-----EecccccC-Cceee-EEEcCCCCEEEEecCCCC-CcEEEEeccccc---eeeeec
Confidence 311 3478888988876 12233222 24444 899999988877654422 235677765322 222222
Q ss_pred ecccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463 403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG 435 (790)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~ 435 (790)
. +...+-..++||||..++......+
T Consensus 429 g-------H~~RVl~la~SPdg~~i~t~a~DET 454 (484)
T KOG0305|consen 429 G-------HTSRVLYLALSPDGETIVTGAADET 454 (484)
T ss_pred C-------CcceeEEEEECCCCCEEEEecccCc
Confidence 2 5566788999999998876654444
No 275
>KOG0286|consensus
Probab=97.52 E-value=0.081 Score=50.99 Aligned_cols=161 Identities=14% Similarity=0.144 Sum_probs=95.2
Q ss_pred CCEEEEEEEccCCcEEEEEeccCcceEEEEEECC--CCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSIN--EGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~--~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
..++..-++||.|+.++.-.-+ +...||-+... .|..+......+.+++ ...-.|-+|+. |+ +.+ |
T Consensus 97 s~WVMtCA~sPSg~~VAcGGLd-N~Csiy~ls~~d~~g~~~v~r~l~gHtgy---lScC~f~dD~~-il-T~S------G 164 (343)
T KOG0286|consen 97 SSWVMTCAYSPSGNFVACGGLD-NKCSIYPLSTRDAEGNVRVSRELAGHTGY---LSCCRFLDDNH-IL-TGS------G 164 (343)
T ss_pred ceeEEEEEECCCCCeEEecCcC-ceeEEEecccccccccceeeeeecCccce---eEEEEEcCCCc-eE-ecC------C
Confidence 4567889999999988775432 33334444322 2222222222233333 34677888876 44 454 4
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeec-CCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDE-KENNVYFLSTQGSPIVQHMYRINIADPTATPECIT 402 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt 402 (790)
-....++|+++|+ +...+..+..++.. ++.+| ++++++--+-+.. ..||-+... .+.-
T Consensus 165 ------D~TCalWDie~g~-----~~~~f~GH~gDV~s-lsl~p~~~ntFvSg~cD~~---aklWD~R~~------~c~q 223 (343)
T KOG0286|consen 165 ------DMTCALWDIETGQ-----QTQVFHGHTGDVMS-LSLSPSDGNTFVSGGCDKS---AKLWDVRSG------QCVQ 223 (343)
T ss_pred ------CceEEEEEcccce-----EEEEecCCcccEEE-EecCCCCCCeEEecccccc---eeeeeccCc------ceeE
Confidence 3467889999887 34456666666665 78889 7774433333332 566655322 2222
Q ss_pred ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463 403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG 446 (790)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~ 446 (790)
. ++++...+..+.|-|+|.-++...+ -....++|+..
T Consensus 224 t----F~ghesDINsv~ffP~G~afatGSD---D~tcRlyDlRa 260 (343)
T KOG0286|consen 224 T----FEGHESDINSVRFFPSGDAFATGSD---DATCRLYDLRA 260 (343)
T ss_pred e----ecccccccceEEEccCCCeeeecCC---CceeEEEeecC
Confidence 1 2347788899999999987755433 33467778765
No 276
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=97.51 E-value=0.01 Score=58.92 Aligned_cols=175 Identities=14% Similarity=0.124 Sum_probs=92.7
Q ss_pred CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCC
Q psy463 247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTP 326 (790)
Q Consensus 247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~ 326 (790)
....++++|+||+.+++.....+...|++....+. ...+.... ....|.|+++|. +.+... ...+
T Consensus 24 ~~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~-~~~~~~g~-------~l~~PS~d~~g~-~W~v~~---~~~~--- 88 (253)
T PF10647_consen 24 YDVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGP-VRPVLTGG-------SLTRPSWDPDGW-VWTVDD---GSGG--- 88 (253)
T ss_pred ccccceEECCCCCeEEEEEEcCCCCEEEEEcCCCc-ceeeccCC-------ccccccccCCCC-EEEEEc---CCCc---
Confidence 35678999999995555554445566888876544 33333211 155899999976 442322 1111
Q ss_pred cCcccEEEEEEcCCCCcccCCCcccccCCCe--EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC-CCCCcceeee
Q psy463 327 VDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF--TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD-PTATPECITC 403 (790)
Q Consensus 327 ~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~lt~ 403 (790)
..+.+ +...++. ....+..... .+.. +.+||||.++++....+.. .+|++..+.- .++.+..++.
T Consensus 89 ----~~~~~-~~~~g~~----~~~~v~~~~~~~~I~~-l~vSpDG~RvA~v~~~~~~--~~v~va~V~r~~~g~~~~l~~ 156 (253)
T PF10647_consen 89 ----VRVVR-DSASGTG----EPVEVDWPGLRGRITA-LRVSPDGTRVAVVVEDGGG--GRVYVAGVVRDGDGVPRRLTG 156 (253)
T ss_pred ----eEEEE-ecCCCcc----eeEEecccccCCceEE-EEECCCCcEEEEEEecCCC--CeEEEEEEEeCCCCCcceecc
Confidence 22222 3223320 0222222111 3444 8999999999999876322 5677665421 1132334433
Q ss_pred cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463 404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL 449 (790)
Q Consensus 404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~ 449 (790)
.+.-..........+.|+++++.++.......+... .+...+...
T Consensus 157 ~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~~~~~~-~v~~dG~~~ 201 (253)
T PF10647_consen 157 PRRVAPPLLSDVTDVAWSDDSTLVVLGRSAGGPVVR-LVSVDGGPS 201 (253)
T ss_pred ceEecccccCcceeeeecCCCEEEEEeCCCCCceeE-EEEccCCcc
Confidence 211111123456789999999877766444432222 444444433
No 277
>PLN00181 protein SPA1-RELATED; Provisional
Probab=97.50 E-value=0.05 Score=64.46 Aligned_cols=165 Identities=13% Similarity=0.141 Sum_probs=89.5
Q ss_pred CCCCEEEEEEEcc-CCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeE-ccCCCEEEEEEcccccc
Q psy463 244 NVEPVLSRVNWAN-ESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRF-SSDGKKMLLILSHNQES 321 (790)
Q Consensus 244 ~~~~~~~~~~wsp-Dg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~-spDg~~i~~~~~~~~~~ 321 (790)
.....+..+.|+| ||.+++....+. .|.++|+.++.+........ ......| +++|+.|+ +.+ .
T Consensus 573 ~H~~~V~~l~~~p~~~~~L~Sgs~Dg---~v~iWd~~~~~~~~~~~~~~------~v~~v~~~~~~g~~la-tgs----~ 638 (793)
T PLN00181 573 EHEKRVWSIDYSSADPTLLASGSDDG---SVKLWSINQGVSIGTIKTKA------NICCVQFPSESGRSLA-FGS----A 638 (793)
T ss_pred CCCCCEEEEEEcCCCCCEEEEEcCCC---EEEEEECCCCcEEEEEecCC------CeEEEEEeCCCCCEEE-EEe----C
Confidence 3456688999997 677655544332 38888888776543332211 1235677 45788776 555 4
Q ss_pred CCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463 322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI 401 (790)
Q Consensus 322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 401 (790)
+| .|+++|+..++. ....+..+...+.. +.|. ++..|+-.+.++. ..||.+..........++
T Consensus 639 dg--------~I~iwD~~~~~~----~~~~~~~h~~~V~~-v~f~-~~~~lvs~s~D~~---ikiWd~~~~~~~~~~~~l 701 (793)
T PLN00181 639 DH--------KVYYYDLRNPKL----PLCTMIGHSKTVSY-VRFV-DSSTLVSSSTDNT---LKLWDLSMSISGINETPL 701 (793)
T ss_pred CC--------eEEEEECCCCCc----cceEecCCCCCEEE-EEEe-CCCEEEEEECCCE---EEEEeCCCCccccCCcce
Confidence 55 689999875430 02233333333443 6776 6776666555533 455544321100011122
Q ss_pred eecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463 402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG 446 (790)
Q Consensus 402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~ 446 (790)
.. +.+.......+.|++++.+++.... -..+++++...
T Consensus 702 ~~----~~gh~~~i~~v~~s~~~~~lasgs~---D~~v~iw~~~~ 739 (793)
T PLN00181 702 HS----FMGHTNVKNFVGLSVSDGYIATGSE---TNEVFVYHKAF 739 (793)
T ss_pred EE----EcCCCCCeeEEEEcCCCCEEEEEeC---CCEEEEEECCC
Confidence 21 1113344566889999987765432 23466666543
No 278
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.50 E-value=0.0014 Score=67.56 Aligned_cols=68 Identities=19% Similarity=0.216 Sum_probs=59.0
Q ss_pred hhhhhhhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHHHh
Q psy463 715 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLDSC 788 (790)
Q Consensus 715 ~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~~~ 788 (790)
+|+.+.+++ ..|.|+|.|+.|+...++.+.-+++.|+. +..+.++|+++|.... ..+.+.+..|+...
T Consensus 253 DP~~Y~~rL-~~PK~ii~atgDeFf~pD~~~~y~d~L~G---~K~lr~vPN~~H~~~~--~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 253 DPYSYRDRL-TMPKYIINATGDEFFVPDSSNFYYDKLPG---EKYLRYVPNAGHSLIG--SDVVQSLRAFYNRI 320 (367)
T ss_pred CHHHHHHhc-CccEEEEecCCCceeccCchHHHHhhCCC---CeeEEeCCCCCcccch--HHHHHHHHHHHHHH
Confidence 445888999 99999999999999999999999999985 4688999999999874 77778888888764
No 279
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.48 E-value=0.002 Score=63.89 Aligned_cols=61 Identities=10% Similarity=0.150 Sum_probs=57.4
Q ss_pred CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHH
Q psy463 725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFL 785 (790)
Q Consensus 725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl 785 (790)
.+|-|++.++.|.+++.+..+++.+..++.|.+++...+++..|.-+. +++++.+.+.+|+
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 689999999999999999999999999999999999999999998876 8999999998884
No 280
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.48 E-value=0.0015 Score=63.94 Aligned_cols=244 Identities=10% Similarity=0.072 Sum_probs=117.1
Q ss_pred CCccEEEEEcCCCCccc--cccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHH
Q psy463 499 KKYPLLIHVYGGPSSFQ--VTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQE 576 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~--~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 576 (790)
+++|+++-.|--+-... +..-+...-...++ ..+.|+-+|.+|.......+. ..+..-.++++.+.+..+.+
T Consensus 21 ~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~--~~f~i~Hi~aPGqe~ga~~~p----~~y~yPsmd~LAe~l~~Vl~ 94 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL--QNFCIYHIDAPGQEEGAATLP----EGYQYPSMDQLAEMLPEVLD 94 (283)
T ss_dssp TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH--TTSEEEEEE-TTTSTT---------TT-----HHHHHCTHHHHHH
T ss_pred CCCceEEEeccccccchHHHHHHhcchhHHHHh--hceEEEEEeCCCCCCCccccc----ccccccCHHHHHHHHHHHHH
Confidence 46899999998654311 00111111222333 589999999999765222222 12222346777777777776
Q ss_pred hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc-------CCCCccCchhhhhhc
Q psy463 577 NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM-------GLPTFEDNLEGYKIA 649 (790)
Q Consensus 577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~ 649 (790)
+++ .+.+.-+|-..|+++-..+|..+|+ ++.++|++++...-.....+...+.+ |.. .. ...|-..
T Consensus 95 ~f~---lk~vIg~GvGAGAnIL~rfAl~~p~-~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt--~~-~~d~Ll~ 167 (283)
T PF03096_consen 95 HFG---LKSVIGFGVGAGANILARFALKHPE-RVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMT--SS-VKDYLLW 167 (283)
T ss_dssp HHT------EEEEEETHHHHHHHHHHHHSGG-GEEEEEEES---S---HHHHHHHHHH-------CTT--S--HHHHHHH
T ss_pred hCC---ccEEEEEeeccchhhhhhccccCcc-ceeEEEEEecCCCCccHHHHHHHHHhcccccccccc--cc-hHHhhhh
Confidence 544 4779999999999999999999986 89999999987654432222222211 111 00 0000000
Q ss_pred cccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhc----CcchhcccccCCCCcCCcchhhhhhhhhhhhhccCC
Q psy463 650 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA----DIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRD 725 (790)
Q Consensus 650 ~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 725 (790)
-.. -.... .. ..+-.....+.+.+. +.......|. .+.++....+.. .
T Consensus 168 h~F--g~~~~-----------~~--n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~------------~R~DL~~~~~~~-~ 219 (283)
T PF03096_consen 168 HYF--GKEEE-----------EN--NSDLVQTYRQHLDERINPKNLALFLNSYN------------SRTDLSIERPSL-G 219 (283)
T ss_dssp HHS---HHHH-----------HC--T-HHHHHHHHHHHT-TTHHHHHHHHHHHH------------T-----SECTTC-C
T ss_pred ccc--ccccc-----------cc--cHHHHHHHHHHHhcCCCHHHHHHHHHHHh------------ccccchhhcCCC-C
Confidence 000 00000 00 000001111111110 0000011111 111122334455 8
Q ss_pred ccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463 726 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS 787 (790)
Q Consensus 726 ~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~ 787 (790)
||+|++.|..-+. .+.+.++...|.. ....++.++++|=.+.. .+..+.+.+.-||+-
T Consensus 220 c~vLlvvG~~Sp~--~~~vv~~ns~Ldp--~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 220 CPVLLVVGDNSPH--VDDVVEMNSKLDP--TKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp S-EEEEEETTSTT--HHHHHHHHHHS-C--CCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCcc--hhhHHHHHhhcCc--ccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 9999999998864 4566788887753 35789999999877776 888899999999874
No 281
>KOG1516|consensus
Probab=97.47 E-value=0.00041 Score=78.26 Aligned_cols=130 Identities=22% Similarity=0.359 Sum_probs=81.1
Q ss_pred EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhh-hhccCCc
Q psy463 483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYA-GYRRLGT 561 (790)
Q Consensus 483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~-~~~~~~~ 561 (790)
++.-++.|.... ..+ .|++|++|||.....-...+.......++..+..+|+.++||-.. .| |... .....|.
T Consensus 97 LylNV~tp~~~~--~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~-lG--F~st~d~~~~gN 170 (545)
T KOG1516|consen 97 LYLNVYTPQGCS--ESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGP-LG--FLSTGDSAAPGN 170 (545)
T ss_pred ceEEEeccCCCc--cCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEeccccee-ce--eeecCCCCCCCc
Confidence 555677777532 112 899999999976432112222223345555568999999999421 22 1111 1111344
Q ss_pred cchhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHHHHHhcCC-CCceEEEEEeCCC
Q psy463 562 VEIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATGLALALDP-SNVFKCGISVAPV 619 (790)
Q Consensus 562 ~~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~~~a~~~p-~~~~~~~v~~~~~ 619 (790)
..+.|+..+++|+.++ .+ -|+++|.|+|||.||..+..++..-. ...|..+|..++.
T Consensus 171 ~gl~Dq~~AL~wv~~~I~~FG-Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 171 LGLFDQLLALRWVKDNIPSFG-GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred ccHHHHHHHHHHHHHHHHhcC-CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 5567999999999775 44 68999999999999999877665211 1355555555553
No 282
>KOG2048|consensus
Probab=97.45 E-value=0.058 Score=57.88 Aligned_cols=176 Identities=15% Similarity=0.163 Sum_probs=98.3
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
.....+...+.||||.++++..-. ...||.+..+. ..+...-. .............|+-|+..++ +++ ....
T Consensus 380 k~~~nIs~~aiSPdg~~Ia~st~~--~~~iy~L~~~~-~vk~~~v~-~~~~~~~~a~~i~ftid~~k~~-~~s---~~~~ 451 (691)
T KOG2048|consen 380 KEKENISCAAISPDGNLIAISTVS--RTKIYRLQPDP-NVKVINVD-DVPLALLDASAISFTIDKNKLF-LVS---KNIF 451 (691)
T ss_pred CCccceeeeccCCCCCEEEEeecc--ceEEEEeccCc-ceeEEEec-cchhhhccceeeEEEecCceEE-EEe---cccc
Confidence 455667888999999966654321 22377777665 22221111 1111111244678899998877 444 1223
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT 402 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt 402 (790)
.|..+++++... + ....++.. .......+..|+||.+|+..+.. ..|+.+++++ .+.+++.
T Consensus 452 --------~le~~el~~ps~-k--el~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~-----g~I~v~nl~~--~~~~~l~ 513 (691)
T KOG2048|consen 452 --------SLEEFELETPSF-K--ELKSIQSQAKCPSISRLVVSSDGNYIAAISTR-----GQIFVYNLET--LESHLLK 513 (691)
T ss_pred --------eeEEEEecCcch-h--hhhccccccCCCcceeEEEcCCCCEEEEEecc-----ceEEEEEccc--ceeecch
Confidence 567777665431 0 02222221 11222236789999999999866 6889999987 5555555
Q ss_pred ecccccCCCcccEEEEEEecC-CcEEEEEeecCCCCeEEEEecCCCeEEEecc
Q psy463 403 CDLLTSANQKCSYSGATFSTN-VSYYVLSCIGPGIPEIMLFDKTGQRLLYWDT 454 (790)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~s~d-g~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 454 (790)
..+ +..+.-..++|. -..++...+ ..+++-+|+..+++..|..
T Consensus 514 ~rl------n~~vTa~~~~~~~~~~lvvats---~nQv~efdi~~~~l~~ws~ 557 (691)
T KOG2048|consen 514 VRL------NIDVTAAAFSPFVRNRLVVATS---NNQVFEFDIEARNLTRWSK 557 (691)
T ss_pred hcc------CcceeeeeccccccCcEEEEec---CCeEEEEecchhhhhhhhh
Confidence 321 234455667744 345544432 3457777776555555433
No 283
>KOG0265|consensus
Probab=97.45 E-value=0.027 Score=54.39 Aligned_cols=246 Identities=11% Similarity=0.078 Sum_probs=124.6
Q ss_pred cccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccC
Q psy463 114 LRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQE 193 (790)
Q Consensus 114 ~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (790)
-.|+|||..++ + ||.-++|.+.+..+.. +...-++....-++.+ .|..++. .++-..
T Consensus 53 ~~F~P~gs~~a--S-----------gG~Dr~I~LWnv~gdc----eN~~~lkgHsgAVM~l-~~~~d~s--~i~S~g--- 109 (338)
T KOG0265|consen 53 IKFHPDGSCFA--S-----------GGSDRAIVLWNVYGDC----ENFWVLKGHSGAVMEL-HGMRDGS--HILSCG--- 109 (338)
T ss_pred EEECCCCCeEe--e-----------cCCcceEEEEeccccc----cceeeeccccceeEee-eeccCCC--EEEEec---
Confidence 37899998655 2 2334577777643321 2244444444444444 4444444 232221
Q ss_pred CCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc--EEEEEeccCcce
Q psy463 194 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV--VAAWVNRVQNRA 271 (790)
Q Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~--~~~~~~r~~~~~ 271 (790)
...+|+..|.++|+..+ ... ........+. |--+ .+..+ +++..
T Consensus 110 --------tDk~v~~wD~~tG~~~r-----k~k-----------------~h~~~vNs~~--p~rrg~~lv~S--gsdD~ 155 (338)
T KOG0265|consen 110 --------TDKTVRGWDAETGKRIR-----KHK-----------------GHTSFVNSLD--PSRRGPQLVCS--GSDDG 155 (338)
T ss_pred --------CCceEEEEecccceeee-----hhc-----------------cccceeeecC--ccccCCeEEEe--cCCCc
Confidence 11588899999987422 221 1122222222 3323 22222 22333
Q ss_pred EEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463 272 RITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP 351 (790)
Q Consensus 272 ~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 351 (790)
++.+.|..+.++..++...- ....+.|..++.++. ... -++ +|-++|+..++ ....
T Consensus 156 t~kl~D~R~k~~~~t~~~ky------qltAv~f~d~s~qv~-sgg----Idn--------~ikvWd~r~~d-----~~~~ 211 (338)
T KOG0265|consen 156 TLKLWDIRKKEAIKTFENKY------QLTAVGFKDTSDQVI-SGG----IDN--------DIKVWDLRKND-----GLYT 211 (338)
T ss_pred eEEEEeecccchhhccccce------eEEEEEeccccccee-ecc----ccC--------ceeeeccccCc-----ceEE
Confidence 47777777665554443211 123688888888876 443 233 67788886665 1334
Q ss_pred ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463 352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSC 431 (790)
Q Consensus 352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~ 431 (790)
|......+.+ ++.+++|..+.-.+-+ ..+.+.+...-.-..+|+.-.....+.-.-..-.-+|||+++.+.+..
T Consensus 212 lsGh~DtIt~-lsls~~gs~llsnsMd-----~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags 285 (338)
T KOG0265|consen 212 LSGHADTITG-LSLSRYGSFLLSNSMD-----NTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGS 285 (338)
T ss_pred eecccCceee-EEeccCCCcccccccc-----ceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCcccccc
Confidence 4444455565 7789999876555544 333333332110122333321000000011223468999999887654
Q ss_pred ecCCCCeEEEEecCCCeE
Q psy463 432 IGPGIPEIMLFDKTGQRL 449 (790)
Q Consensus 432 ~~~~~~~i~~~~~~~~~~ 449 (790)
... .+|+.|..+..+
T Consensus 286 ~dr---~vyvwd~~~r~~ 300 (338)
T KOG0265|consen 286 ADR---FVYVWDTTSRRI 300 (338)
T ss_pred ccc---eEEEeecccccE
Confidence 444 377777665433
No 284
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.45 E-value=0.0003 Score=72.29 Aligned_cols=115 Identities=17% Similarity=0.116 Sum_probs=65.0
Q ss_pred CCccEEEEEcCCCCccccccccccchHHHHHhc--CCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHH
Q psy463 499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADN--KDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQE 576 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~--~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 576 (790)
...|++|++||..+... ...|.......++.. .++.|+++|....... .+..+.... ......+...+..|..
T Consensus 69 ~~~pt~iiiHGw~~~~~-~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n~--~~vg~~la~~l~~L~~ 143 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGS-SESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVANT--RLVGRQLAKFLSFLIN 143 (331)
T ss_dssp TTSEEEEEE--TT-TT--TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCccc-chhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhhhH--HHHHHHHHHHHHHHHh
Confidence 45799999999887641 344555555666665 6899999998632111 111111100 0112334455666664
Q ss_pred hCCCcCCCceEEEEechHHHHHHHHHhcCCC-CceEEEEEeCCC
Q psy463 577 NLPYIDKTRTAIWGWSYGGYATGLALALDPS-NVFKCGISVAPV 619 (790)
Q Consensus 577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~-~~~~~~v~~~~~ 619 (790)
..+ ++.++|.|+|||+||.+|..+..+... ..+..+.++.|.
T Consensus 144 ~~g-~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPA 186 (331)
T PF00151_consen 144 NFG-VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPA 186 (331)
T ss_dssp HH----GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B
T ss_pred hcC-CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcc
Confidence 233 788999999999999999998876654 356677777764
No 285
>KOG2394|consensus
Probab=97.43 E-value=0.013 Score=60.78 Aligned_cols=69 Identities=20% Similarity=0.386 Sum_probs=41.7
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
...+.|||||+.|+ +++ .+| + |.+++.++.+ ..-+.+.-+.-.--..||||||+|+.-..+
T Consensus 293 in~f~FS~DG~~LA-~VS----qDG------f--LRvF~fdt~e------Llg~mkSYFGGLLCvcWSPDGKyIvtGGED 353 (636)
T KOG2394|consen 293 INEFAFSPDGKYLA-TVS----QDG------F--LRIFDFDTQE------LLGVMKSYFGGLLCVCWSPDGKYIVTGGED 353 (636)
T ss_pred ccceeEcCCCceEE-EEe----cCc------e--EEEeeccHHH------HHHHHHhhccceEEEEEcCCccEEEecCCc
Confidence 56889999999999 676 678 4 4455554443 333333212111127899999987665444
Q ss_pred CCCceEEEEEE
Q psy463 379 GSPIVQHMYRI 389 (790)
Q Consensus 379 ~~~~~~~l~~~ 389 (790)
.- ..+|.+
T Consensus 354 DL---VtVwSf 361 (636)
T KOG2394|consen 354 DL---VTVWSF 361 (636)
T ss_pred ce---EEEEEe
Confidence 21 455544
No 286
>KOG0275|consensus
Probab=97.43 E-value=0.011 Score=57.23 Aligned_cols=167 Identities=12% Similarity=0.174 Sum_probs=92.6
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
.....+..++||.|+..+...+.++. +.+-.+.+|++-.-+. +... ......|++||..|+ .++ .+|
T Consensus 304 AHtkGvt~l~FSrD~SqiLS~sfD~t---vRiHGlKSGK~LKEfr--GHsS---yvn~a~ft~dG~~ii-saS----sDg 370 (508)
T KOG0275|consen 304 AHTKGVTCLSFSRDNSQILSASFDQT---VRIHGLKSGKCLKEFR--GHSS---YVNEATFTDDGHHII-SAS----SDG 370 (508)
T ss_pred hhccCeeEEEEccCcchhhcccccce---EEEeccccchhHHHhc--Cccc---cccceEEcCCCCeEE-Eec----CCc
Confidence 34456789999999994444433332 5555667776643222 1122 245789999999998 666 567
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC 403 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~ 403 (790)
.+-+++..+++-.. +.+++. .+..+.. ...-|.+-.-+..-++. ..+|++++.+ ..++..+.
T Consensus 371 --------tvkvW~~KtteC~~--Tfk~~~-~d~~vns-v~~~PKnpeh~iVCNrs----ntv~imn~qG--QvVrsfsS 432 (508)
T KOG0275|consen 371 --------TVKVWHGKTTECLS--TFKPLG-TDYPVNS-VILLPKNPEHFIVCNRS----NTVYIMNMQG--QVVRSFSS 432 (508)
T ss_pred --------cEEEecCcchhhhh--hccCCC-Cccccee-EEEcCCCCceEEEEcCC----CeEEEEeccc--eEEeeecc
Confidence 46677766554100 012222 1233333 22234433223333332 5788888876 33444443
Q ss_pred cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCe
Q psy463 404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR 448 (790)
Q Consensus 404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~ 448 (790)
+- ...+.+....+||.|.|++.... -..+|.+...+++
T Consensus 433 Gk----REgGdFi~~~lSpkGewiYcigE---D~vlYCF~~~sG~ 470 (508)
T KOG0275|consen 433 GK----REGGDFINAILSPKGEWIYCIGE---DGVLYCFSVLSGK 470 (508)
T ss_pred CC----ccCCceEEEEecCCCcEEEEEcc---CcEEEEEEeecCc
Confidence 21 13456777889999999876532 2346666655443
No 287
>KOG0283|consensus
Probab=97.41 E-value=0.042 Score=60.47 Aligned_cols=164 Identities=16% Similarity=0.189 Sum_probs=81.0
Q ss_pred CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463 245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS 324 (790)
Q Consensus 245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~ 324 (790)
...+++.++|.|-....+.+.--+.+.+||-+ ... +.+.-.+. .+......|+|||+..+ +.+ -.|
T Consensus 408 HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI--~d~--~Vv~W~Dl----~~lITAvcy~PdGk~av-IGt----~~G- 473 (712)
T KOG0283|consen 408 HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSI--SDK--KVVDWNDL----RDLITAVCYSPDGKGAV-IGT----FNG- 473 (712)
T ss_pred cCCeeEEEEecccCCCcEeecccccceEEeec--CcC--eeEeehhh----hhhheeEEeccCCceEE-EEE----ecc-
Confidence 34566677777755533333333334444433 222 21211111 02355789999999766 555 345
Q ss_pred CCcCcccEEEEEEcCCCCcccCCCccccc-----CCCeEEeEEEeeecC-CCEEEEEEcCCCCceEEEEEEEcCCCCCCc
Q psy463 325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLT-----RGRFTVTEILAWDEK-ENNVYFLSTQGSPIVQHMYRINIADPTATP 398 (790)
Q Consensus 325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt-----~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 398 (790)
. ..+++..+.+..... -..+. .+. .+++ +++.|. ...|.+++++ .+|.++++.. .
T Consensus 474 -----~--C~fY~t~~lk~~~~~-~I~~~~~Kk~~~~-rITG-~Q~~p~~~~~vLVTSnD-----SrIRI~d~~~--~-- 534 (712)
T KOG0283|consen 474 -----Y--CRFYDTEGLKLVSDF-HIRLHNKKKKQGK-RITG-LQFFPGDPDEVLVTSND-----SRIRIYDGRD--K-- 534 (712)
T ss_pred -----E--EEEEEccCCeEEEee-eEeeccCccccCc-eeee-eEecCCCCCeEEEecCC-----CceEEEeccc--h--
Confidence 2 333333332200000 00011 122 3555 555543 3368888888 5666666533 1
Q ss_pred ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463 399 ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG 446 (790)
Q Consensus 399 ~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~ 446 (790)
.|.+-+.+.. +...-..++|+.||++|+..+.. ..||+++...
T Consensus 535 -~lv~KfKG~~-n~~SQ~~Asfs~Dgk~IVs~seD---s~VYiW~~~~ 577 (712)
T KOG0283|consen 535 -DLVHKFKGFR-NTSSQISASFSSDGKHIVSASED---SWVYIWKNDS 577 (712)
T ss_pred -hhhhhhcccc-cCCcceeeeEccCCCEEEEeecC---ceEEEEeCCC
Confidence 2222111111 23344568899999999887644 3488877654
No 288
>COG3150 Predicted esterase [General function prediction only]
Probab=97.41 E-value=0.0034 Score=55.13 Aligned_cols=51 Identities=14% Similarity=0.275 Sum_probs=37.3
Q ss_pred EEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCCcchHHHHHHHHHHH
Q psy463 728 YLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIGVRPHFYHTLERFLD 786 (790)
Q Consensus 728 ~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~i~~fl~ 786 (790)
+.++.-+.|++...+++.+.+.... ..+..|.+|.|.. -...++.|..|+.
T Consensus 137 ~~lL~qtgDEvLDyr~a~a~y~~~~-------~~V~dgg~H~F~~-f~~~l~~i~aF~g 187 (191)
T COG3150 137 LVLLSQTGDEVLDYRQAVAYYHPCY-------EIVWDGGDHKFKG-FSRHLQRIKAFKG 187 (191)
T ss_pred EEeecccccHHHHHHHHHHHhhhhh-------heeecCCCccccc-hHHhHHHHHHHhc
Confidence 3444555699998888888877654 3577889999984 5667788888864
No 289
>KOG0645|consensus
Probab=97.39 E-value=0.028 Score=53.41 Aligned_cols=22 Identities=45% Similarity=0.596 Sum_probs=18.1
Q ss_pred cCCceeEeCCCCCceEEEEecC
Q psy463 8 SSSSALWFSPSGNNLAYASFDD 29 (790)
Q Consensus 8 ~~~~~~~wSPDG~~iaf~~~~~ 29 (790)
.+..+.+|||.|+.||..|++.
T Consensus 62 rsVRsvAwsp~g~~La~aSFD~ 83 (312)
T KOG0645|consen 62 RSVRSVAWSPHGRYLASASFDA 83 (312)
T ss_pred heeeeeeecCCCcEEEEeeccc
Confidence 4567889999999999988743
No 290
>KOG0282|consensus
Probab=97.36 E-value=0.017 Score=59.18 Aligned_cols=274 Identities=13% Similarity=0.058 Sum_probs=142.6
Q ss_pred CceeEeCC-CCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463 10 SSALWFSP-SGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC 88 (790)
Q Consensus 10 ~~~~~wSP-DG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~ 88 (790)
.+++.|.| -|+-|+ ...-++.+.||.+--.++- ......+...+..+.|++++..++-..- ...+.++
T Consensus 217 vsai~~fp~~~hLlL-S~gmD~~vklW~vy~~~~~-------lrtf~gH~k~Vrd~~~s~~g~~fLS~sf---D~~lKlw 285 (503)
T KOG0282|consen 217 VSAIQWFPKKGHLLL-SGGMDGLVKLWNVYDDRRC-------LRTFKGHRKPVRDASFNNCGTSFLSASF---DRFLKLW 285 (503)
T ss_pred cchhhhccceeeEEE-ecCCCceEEEEEEecCcce-------ehhhhcchhhhhhhhccccCCeeeeeec---ceeeeee
Confidence 46778999 555444 4445666666655444441 1122223333455678777776544432 3567889
Q ss_pred eCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccc
Q psy463 89 SINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR 168 (790)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~ 168 (790)
|..||+|..-+....-- .--.|.||+..+++.- |.-..|-.+|+-+++ +.+.....-
T Consensus 286 DtETG~~~~~f~~~~~~------~cvkf~pd~~n~fl~G------------~sd~ki~~wDiRs~k-----vvqeYd~hL 342 (503)
T KOG0282|consen 286 DTETGQVLSRFHLDKVP------TCVKFHPDNQNIFLVG------------GSDKKIRQWDIRSGK-----VVQEYDRHL 342 (503)
T ss_pred ccccceEEEEEecCCCc------eeeecCCCCCcEEEEe------------cCCCcEEEEeccchH-----HHHHHHhhh
Confidence 99999988765543211 1237789997766533 223378888887774 333333332
Q ss_pred eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCE
Q psy463 169 FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPV 248 (790)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~ 248 (790)
..+..+.-. +.+ ..|++.+... .-.||-....- +.++.. ....+.
T Consensus 343 g~i~~i~F~-~~g---~rFissSDdk--------s~riWe~~~~v--------~ik~i~---------------~~~~hs 387 (503)
T KOG0282|consen 343 GAILDITFV-DEG---RRFISSSDDK--------SVRIWENRIPV--------PIKNIA---------------DPEMHT 387 (503)
T ss_pred hheeeeEEc-cCC---ceEeeeccCc--------cEEEEEcCCCc--------cchhhc---------------chhhcc
Confidence 233333222 222 2455443211 13444332211 221110 023344
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCCC---ceeEEEEEeCCCcccc-cCCceeEccCCCEEEEEEccccccCCC
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINEG---TCDVVFSRDLDRGWFE-PFDHLRFSSDGKKMLLILSHNQESDGS 324 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g---~~~~l~~~~~~~~~~~-~~~~~~~spDg~~i~~~~~~~~~~~g~ 324 (790)
...++-+|+|++++..+-+. .|++..+... ..+..++ +.+.. ..-...|||||+.|+ +.. .+|
T Consensus 388 mP~~~~~P~~~~~~aQs~dN---~i~ifs~~~~~r~nkkK~fe----Gh~vaGys~~v~fSpDG~~l~-SGd----sdG- 454 (503)
T KOG0282|consen 388 MPCLTLHPNGKWFAAQSMDN---YIAIFSTVPPFRLNKKKRFE----GHSVAGYSCQVDFSPDGRTLC-SGD----SDG- 454 (503)
T ss_pred CcceecCCCCCeehhhccCc---eEEEEecccccccCHhhhhc----ceeccCceeeEEEcCCCCeEE-eec----CCc-
Confidence 56778899999544433221 2444432211 1122222 11221 123678999999886 443 566
Q ss_pred CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
.++.+|..+-+ ....|..++-.... ..|.|-....+.++..
T Consensus 455 -------~v~~wdwkt~k-----l~~~lkah~~~ci~-v~wHP~e~Skvat~~w 495 (503)
T KOG0282|consen 455 -------KVNFWDWKTTK-----LVSKLKAHDQPCIG-VDWHPVEPSKVATCGW 495 (503)
T ss_pred -------cEEEeechhhh-----hhhccccCCcceEE-EEecCCCcceeEeccc
Confidence 78999987765 13445444433444 6798876655555443
No 291
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.26 E-value=0.00066 Score=59.34 Aligned_cols=127 Identities=20% Similarity=0.264 Sum_probs=79.9
Q ss_pred HHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhcCCCCccCchhhhh
Q psy463 568 INVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYMGLPTFEDNLEGYK 647 (790)
Q Consensus 568 ~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 647 (790)
.+-.+|+++. +=+.+..+.|.||||+.|+.+..++|. .|..+|+.+|+.+...+ +|.. .+. +.|-
T Consensus 88 ~AyerYv~eE---alpgs~~~sgcsmGayhA~nfvfrhP~-lftkvialSGvYdardf--------fg~y--ydd-Dv~y 152 (227)
T COG4947 88 RAYERYVIEE---ALPGSTIVSGCSMGAYHAANFVFRHPH-LFTKVIALSGVYDARDF--------FGGY--YDD-DVYY 152 (227)
T ss_pred HHHHHHHHHh---hcCCCccccccchhhhhhhhhheeChh-HhhhheeecceeeHHHh--------cccc--ccC-ceee
Confidence 3445566652 112457889999999999999999986 99999999999776422 1111 000 0000
Q ss_pred hccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCCcc
Q psy463 648 IAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRDKQ 727 (790)
Q Consensus 648 ~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P 727 (790)
.+|.. .+.|..|+ ..+++++++-
T Consensus 153 -nsP~d-----------ylpg~~dp---------------------------------------------~~l~rlr~~~ 175 (227)
T COG4947 153 -NSPSD-----------YLPGLADP---------------------------------------------FRLERLRRID 175 (227)
T ss_pred -cChhh-----------hccCCcCh---------------------------------------------HHHHHHhhcc
Confidence 11111 11111110 3355554668
Q ss_pred EEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCC
Q psy463 728 YLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEH 768 (790)
Q Consensus 728 ~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H 768 (790)
+.++.|..|+..+ +...|.+.|.++.++..+.+..+..|
T Consensus 176 ~vfc~G~e~~~L~--~~~~L~~~l~dKqipaw~~~WggvaH 214 (227)
T COG4947 176 MVFCIGDEDPFLD--NNQHLSRLLSDKQIPAWMHVWGGVAH 214 (227)
T ss_pred EEEEecCcccccc--chHHHHHHhccccccHHHHHhccccc
Confidence 8899999888765 56678888888888877777766666
No 292
>KOG1445|consensus
Probab=97.25 E-value=0.017 Score=61.17 Aligned_cols=144 Identities=13% Similarity=0.112 Sum_probs=85.7
Q ss_pred ccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCC
Q psy463 202 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINE 280 (790)
Q Consensus 202 ~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~ 280 (790)
.+-.||++...+.......+...|| ....-+..+.|.|=.. .++...-+. .|-++|+.+
T Consensus 650 g~i~lWr~~a~gl~e~~~tPe~~lt-----------------~h~eKI~slRfHPLAadvLa~asyd~---Ti~lWDl~~ 709 (1012)
T KOG1445|consen 650 GQINLWRLTANGLPENEMTPEKILT-----------------IHGEKITSLRFHPLAADVLAVASYDS---TIELWDLAN 709 (1012)
T ss_pred ceEEEEEeccCCCCcccCCcceeee-----------------cccceEEEEEecchhhhHhhhhhccc---eeeeeehhh
Confidence 3468999988775432222223444 5566688899998665 443333222 288888887
Q ss_pred CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEE-
Q psy463 281 GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV- 359 (790)
Q Consensus 281 g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~- 359 (790)
++.+.-+..- .+...+++|||||+.++ ++. ++| .|.++....++ .++-.+...+
T Consensus 710 ~~~~~~l~gH-----tdqIf~~AWSpdGr~~A-tVc----KDg--------~~rVy~Prs~e-------~pv~Eg~gpvg 764 (1012)
T KOG1445|consen 710 AKLYSRLVGH-----TDQIFGIAWSPDGRRIA-TVC----KDG--------TLRVYEPRSRE-------QPVYEGKGPVG 764 (1012)
T ss_pred hhhhheeccC-----cCceeEEEECCCCccee-eee----cCc--------eEEEeCCCCCC-------CccccCCCCcc
Confidence 7654322211 11245899999999999 555 577 68888877664 2332222111
Q ss_pred --eEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463 360 --TEILAWDEKENNVYFLSTQGSPIVQHMYRINI 391 (790)
Q Consensus 360 --~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 391 (790)
..-+.|.-||+.|+..+.+.. .+++|..++.
T Consensus 765 tRgARi~wacdgr~viv~Gfdk~-SeRQv~~Y~A 797 (1012)
T KOG1445|consen 765 TRGARILWACDGRIVIVVGFDKS-SERQVQMYDA 797 (1012)
T ss_pred CcceeEEEEecCcEEEEeccccc-chhhhhhhhh
Confidence 122679999999888876622 1244544443
No 293
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=97.24 E-value=0.0057 Score=68.81 Aligned_cols=33 Identities=15% Similarity=0.294 Sum_probs=26.5
Q ss_pred CCceeEeCCCCCceEE-EEecC--CceeEEEecccC
Q psy463 9 SSSALWFSPSGNNLAY-ASFDD--NRTVIMTIPFYG 41 (790)
Q Consensus 9 ~~~~~~wSPDG~~iaf-~~~~~--~~~~~~~~~~~g 41 (790)
...+|.|||||++||| ++... +...||+..+..
T Consensus 351 ~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t 386 (912)
T TIGR02171 351 SVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNA 386 (912)
T ss_pred ceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhc
Confidence 3467999999999999 77766 688899877653
No 294
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.21 E-value=0.0026 Score=61.77 Aligned_cols=104 Identities=17% Similarity=0.199 Sum_probs=57.5
Q ss_pred cEEEEEcCCCCccccccccccchHHHH-------HhcCCeEEEEEcCCCCC--CChhhhHhhhhccCCccchhHHHHHHH
Q psy463 502 PLLIHVYGGPSSFQVTERFSVDWNLYL-------ADNKDIVVAYIDGRNSA--LKGNTLKYAGYRRLGTVEIYDQINVTR 572 (790)
Q Consensus 502 p~vv~~HG~~~~~~~~~~~~~~~~~~~-------~~~~G~~v~~~d~rG~~--~~g~~~~~~~~~~~~~~~~~D~~~~~~ 572 (790)
..|+|+||..++.. ++.. +.... .....+.++.+|+.... ..|.... ...+-+..+++
T Consensus 5 ~pVlFIhG~~Gs~~---q~rs-l~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~---------~q~~~~~~~i~ 71 (225)
T PF07819_consen 5 IPVLFIHGNAGSYK---QVRS-LASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQ---------RQAEFLAEAIK 71 (225)
T ss_pred CEEEEECcCCCCHh---HHHH-HHHHHhhhhhhccCccceeEEEeccCccccccccccHH---------HHHHHHHHHHH
Confidence 45789999877621 2111 11111 11235778888876421 1221111 12333445566
Q ss_pred HHHHhC--CCcCCCceEEEEechHHHHHHHHHhcCCC--CceEEEEEeCC
Q psy463 573 YLQENL--PYIDKTRTAIWGWSYGGYATGLALALDPS--NVFKCGISVAP 618 (790)
Q Consensus 573 ~l~~~~--~~~d~~ri~i~G~S~GG~~a~~~a~~~p~--~~~~~~v~~~~ 618 (790)
.+.+.+ ......+|.|+||||||.++-.++...+. ..++.++..+.
T Consensus 72 ~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~t 121 (225)
T PF07819_consen 72 YILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGT 121 (225)
T ss_pred HHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcC
Confidence 655533 12456899999999999999887764431 34666665543
No 295
>KOG1273|consensus
Probab=97.19 E-value=0.26 Score=48.08 Aligned_cols=252 Identities=15% Similarity=0.175 Sum_probs=132.5
Q ss_pred ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463 115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES 194 (790)
Q Consensus 115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (790)
.||+-|..++.-.. -+.+.++|+.+-. ..+-++.+-..+. -+.|+.+++. ...+.
T Consensus 30 ~Fs~~G~~lAvGc~-------------nG~vvI~D~~T~~-----iar~lsaH~~pi~-sl~WS~dgr~--LltsS---- 84 (405)
T KOG1273|consen 30 QFSRWGDYLAVGCA-------------NGRVVIYDFDTFR-----IARMLSAHVRPIT-SLCWSRDGRK--LLTSS---- 84 (405)
T ss_pred EeccCcceeeeecc-------------CCcEEEEEccccc-----hhhhhhcccccee-EEEecCCCCE--eeeec----
Confidence 78999998886442 2268888887652 2344444433333 3577777763 22222
Q ss_pred CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc--EEEEEeccCcceE
Q psy463 195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV--VAAWVNRVQNRAR 272 (790)
Q Consensus 195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~--~~~~~~r~~~~~~ 272 (790)
+...|-+.|+-.|.. ..++. .+.-+..+.|.|-.+ .++..-+.+
T Consensus 85 -------~D~si~lwDl~~gs~-----l~rir------------------f~spv~~~q~hp~k~n~~va~~~~~s---- 130 (405)
T KOG1273|consen 85 -------RDWSIKLWDLLKGSP-----LKRIR------------------FDSPVWGAQWHPRKRNKCVATIMEES---- 130 (405)
T ss_pred -------CCceeEEEeccCCCc-----eeEEE------------------ccCccceeeeccccCCeEEEEEecCC----
Confidence 114566667766642 12222 233455778888655 333332222
Q ss_pred EEEEECCCCceeEEEEEeCCCcccc-cCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc
Q psy463 273 ITRCSINEGTCDVVFSRDLDRGWFE-PFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP 351 (790)
Q Consensus 273 i~~~~~~~g~~~~l~~~~~~~~~~~-~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 351 (790)
-++++...+..+.|.... .+-.. ....-.|.+-|++|+ +.. ..| .|.++++++-+-.. .-+
T Consensus 131 p~vi~~s~~~h~~Lp~d~--d~dln~sas~~~fdr~g~yIi-tGt----sKG--------kllv~~a~t~e~va---s~r 192 (405)
T KOG1273|consen 131 PVVIDFSDPKHSVLPKDD--DGDLNSSASHGVFDRRGKYII-TGT----SKG--------KLLVYDAETLECVA---SFR 192 (405)
T ss_pred cEEEEecCCceeeccCCC--ccccccccccccccCCCCEEE-Eec----Ccc--------eEEEEecchheeee---eee
Confidence 344444444444443321 11111 012234888999887 444 456 57778877654000 112
Q ss_pred ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEE-c--CCCCCCcceeeecccccCCCcccEEEEEEecCCcEEE
Q psy463 352 LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRIN-I--ADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYV 428 (790)
Q Consensus 352 lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~-~--~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~ 428 (790)
+|. .-.+.. +.++..|+.+++.+.+.- .+.|.+. + .+.+++++..-. +.+.+ +.-.+....||.||.|++
T Consensus 193 its-~~~IK~-I~~s~~g~~liiNtsDRv---IR~ye~~di~~~~r~~e~e~~~K-~qDvV-Nk~~Wk~ccfs~dgeYv~ 265 (405)
T KOG1273|consen 193 ITS-VQAIKQ-IIVSRKGRFLIINTSDRV---IRTYEISDIDDEGRDGEVEPEHK-LQDVV-NKLQWKKCCFSGDGEYVC 265 (405)
T ss_pred ech-heeeeE-EEEeccCcEEEEecCCce---EEEEehhhhcccCccCCcChhHH-HHHHH-hhhhhhheeecCCccEEE
Confidence 232 112333 668889999998887722 3334332 2 222334332110 11011 344566678999999987
Q ss_pred EEeecCCCCeEEEEecCCCeEEEe
Q psy463 429 LSCIGPGIPEIMLFDKTGQRLLYW 452 (790)
Q Consensus 429 ~~~~~~~~~~i~~~~~~~~~~~~l 452 (790)
... ...-.+|++....+.+..+
T Consensus 266 a~s--~~aHaLYIWE~~~GsLVKI 287 (405)
T KOG1273|consen 266 AGS--ARAHALYIWEKSIGSLVKI 287 (405)
T ss_pred ecc--ccceeEEEEecCCcceeee
Confidence 765 2256789988777666544
No 296
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.17 E-value=0.042 Score=56.24 Aligned_cols=129 Identities=11% Similarity=-0.044 Sum_probs=74.1
Q ss_pred CcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCCh-hhhH------
Q psy463 480 NMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKG-NTLK------ 552 (790)
Q Consensus 480 g~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g-~~~~------ 552 (790)
|.+-.-.+++|.. .+....+||++||...+.. ... .......-+.+.|++++.+..+.-.... ..+.
T Consensus 70 ~~~~flaL~~~~~----~~~~~G~vIilp~~g~~~d-~p~-~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~ 143 (310)
T PF12048_consen 70 GEERFLALWRPAN----SAKPQGAVIILPDWGEHPD-WPG-LIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEV 143 (310)
T ss_pred CCEEEEEEEeccc----CCCCceEEEEecCCCCCCC-cHh-HHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCC
Confidence 4444456677765 4566789999999776521 111 1223344556799999998776511000 0000
Q ss_pred -hh---------------------hhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCce
Q psy463 553 -YA---------------------GYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVF 610 (790)
Q Consensus 553 -~~---------------------~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~ 610 (790)
.. ....+......-+.+++.++.+ ++ ..+|+|+||+.|++++..++...+....
T Consensus 144 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~-~~---~~~ivlIg~G~gA~~~~~~la~~~~~~~ 219 (310)
T PF12048_consen 144 PSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQ-QG---GKNIVLIGHGTGAGWAARYLAEKPPPMP 219 (310)
T ss_pred CCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHh-cC---CceEEEEEeChhHHHHHHHHhcCCCccc
Confidence 00 0000000112233344555554 44 3569999999999999999987776567
Q ss_pred EEEEEeCC
Q psy463 611 KCGISVAP 618 (790)
Q Consensus 611 ~~~v~~~~ 618 (790)
.+.|.+++
T Consensus 220 daLV~I~a 227 (310)
T PF12048_consen 220 DALVLINA 227 (310)
T ss_pred CeEEEEeC
Confidence 77777776
No 297
>KOG0263|consensus
Probab=97.17 E-value=0.0085 Score=65.12 Aligned_cols=162 Identities=16% Similarity=0.194 Sum_probs=99.4
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
...+-+...++|||.+++...+.+.. +-+..+.+..+..++..... +.-..+|+|-|=+++ +++ .++
T Consensus 449 GH~GPVyg~sFsPd~rfLlScSED~s---vRLWsl~t~s~~V~y~GH~~-----PVwdV~F~P~GyYFa-tas----~D~ 515 (707)
T KOG0263|consen 449 GHSGPVYGCSFSPDRRFLLSCSEDSS---VRLWSLDTWSCLVIYKGHLA-----PVWDVQFAPRGYYFA-TAS----HDQ 515 (707)
T ss_pred cCCCceeeeeecccccceeeccCCcc---eeeeecccceeEEEecCCCc-----ceeeEEecCCceEEE-ecC----CCc
Confidence 44555678899999995444433221 66666777777777753222 233577899986655 555 344
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT 402 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt 402 (790)
...||-.| ... +.++-.+ .-++. -..|.|++.+++--+.+. ..++|-+.. |...++-
T Consensus 516 ------tArLWs~d--~~~------PlRifaghlsDV~-cv~FHPNs~Y~aTGSsD~---tVRlWDv~~----G~~VRiF 573 (707)
T KOG0263|consen 516 ------TARLWSTD--HNK------PLRIFAGHLSDVD-CVSFHPNSNYVATGSSDR---TVRLWDVST----GNSVRIF 573 (707)
T ss_pred ------eeeeeecc--cCC------chhhhcccccccc-eEEECCcccccccCCCCc---eEEEEEcCC----CcEEEEe
Confidence 44666655 344 4444333 33333 367899988654443332 256665543 4445555
Q ss_pred ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463 403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL 449 (790)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~ 449 (790)
++ +...+..+.+||+|++++- +..-..|.++|+.++++
T Consensus 574 ~G------H~~~V~al~~Sp~Gr~LaS---g~ed~~I~iWDl~~~~~ 611 (707)
T KOG0263|consen 574 TG------HKGPVTALAFSPCGRYLAS---GDEDGLIKIWDLANGSL 611 (707)
T ss_pred cC------CCCceEEEEEcCCCceEee---cccCCcEEEEEcCCCcc
Confidence 43 6778899999999998854 33456688999887544
No 298
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.14 E-value=0.36 Score=48.85 Aligned_cols=127 Identities=17% Similarity=0.278 Sum_probs=70.5
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccc-cC----CCeEEeE--EEeeecCCCE
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPL-TR----GRFTVTE--ILAWDEKENN 371 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~l-t~----~~~~~~~--~~~~s~dg~~ 371 (790)
+..+.++.++.+++|..- +| .+|.+|+.+.+- +-..+..+ +. ..|...+ .+++++..++
T Consensus 186 f~~~~~~~~~~~~~F~Sy-----~G--------~v~~~dlsg~~~-~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~r 251 (342)
T PF06433_consen 186 FEHPAYSRDGGRLYFVSY-----EG--------NVYSADLSGDSA-KFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGR 251 (342)
T ss_dssp -S--EEETTTTEEEEEBT-----TS--------EEEEEEETTSSE-EEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTE
T ss_pred ccccceECCCCeEEEEec-----CC--------EEEEEeccCCcc-cccCcccccCccccccCcCCcceeeeeeccccCe
Confidence 346777778777886543 56 789999876640 00001111 21 2333321 3677888888
Q ss_pred EEEEEcCCC-----CceEEEEEEEcCCCCCC-cceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463 372 VYFLSTQGS-----PIVQHMYRINIADPTAT-PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT 445 (790)
Q Consensus 372 l~~~~~~~~-----~~~~~l~~~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~ 445 (790)
||+.-..+. -....||.+++++ ++ +.++.- .....++.+|.|.+=+++..+.. ...|+++|..
T Consensus 252 lyvLMh~g~~gsHKdpgteVWv~D~~t--~krv~Ri~l--------~~~~~Si~Vsqd~~P~L~~~~~~-~~~l~v~D~~ 320 (342)
T PF06433_consen 252 LYVLMHQGGEGSHKDPGTEVWVYDLKT--HKRVARIPL--------EHPIDSIAVSQDDKPLLYALSAG-DGTLDVYDAA 320 (342)
T ss_dssp EEEEEEE--TT-TTS-EEEEEEEETTT--TEEEEEEEE--------EEEESEEEEESSSS-EEEEEETT-TTEEEEEETT
T ss_pred EEEEecCCCCCCccCCceEEEEEECCC--CeEEEEEeC--------CCccceEEEccCCCcEEEEEcCC-CCeEEEEeCc
Confidence 888765421 1247899999987 33 222321 12344788899888666655442 3678999988
Q ss_pred CCeEE
Q psy463 446 GQRLL 450 (790)
Q Consensus 446 ~~~~~ 450 (790)
+++..
T Consensus 321 tGk~~ 325 (342)
T PF06433_consen 321 TGKLV 325 (342)
T ss_dssp T--EE
T ss_pred CCcEE
Confidence 76544
No 299
>PLN02209 serine carboxypeptidase
Probab=97.12 E-value=0.023 Score=60.95 Aligned_cols=63 Identities=19% Similarity=0.162 Sum_probs=50.9
Q ss_pred CccEEEEecCCCcccchhhhHHHHHHHHhcCC--------------------c-eEEEEcCCCCCcCCCcchHHHHHHHH
Q psy463 725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI--------------------M-FQSQTYPDEEHGLIGVRPHFYHTLER 783 (790)
Q Consensus 725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~--------------------~-~~~~~~p~~~H~~~~~~~~~~~~i~~ 783 (790)
..++||..|..|.+|+...++.+.+.|+-.+. . ..++.+-++||+....++..+..+.+
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp~qP~~al~m~~~ 430 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAEYLPEESSIMFQR 430 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcCcCHHHHHHHHHH
Confidence 57999999999999999999999888762111 1 55677788999994488899999999
Q ss_pred HHHH
Q psy463 784 FLDS 787 (790)
Q Consensus 784 fl~~ 787 (790)
|+..
T Consensus 431 fi~~ 434 (437)
T PLN02209 431 WISG 434 (437)
T ss_pred HHcC
Confidence 9864
No 300
>KOG0319|consensus
Probab=97.10 E-value=0.32 Score=53.04 Aligned_cols=322 Identities=12% Similarity=0.128 Sum_probs=151.0
Q ss_pred eEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEeeCCC
Q psy463 13 LWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSINE 92 (790)
Q Consensus 13 ~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~~~ 92 (790)
.+||++|+.|+.+-. ..|..+...-+.. ..|....-.....+...-++|..++....|.+ .++++..++
T Consensus 25 ~~~s~nG~~L~t~~~----d~Vi~idv~t~~~----~l~s~~~ed~d~ita~~l~~d~~~L~~a~rs~---llrv~~L~t 93 (775)
T KOG0319|consen 25 VAWSSNGQHLYTACG----DRVIIIDVATGSI----ALPSGSNEDEDEITALALTPDEEVLVTASRSQ---LLRVWSLPT 93 (775)
T ss_pred eeECCCCCEEEEecC----ceEEEEEccCCce----ecccCCccchhhhheeeecCCccEEEEeeccc---eEEEEEccc
Confidence 889999998876532 2233333333320 01111111111122233445667776666654 456677777
Q ss_pred CeeeEEEeecCCCCccccCCcc----ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccc
Q psy463 93 GTCDVVFSRDLDRGWFEPFDHL----RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR 168 (790)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~----~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~ 168 (790)
|++.+. |......| .|+|-|..++ .||.-+.+-+.|+.++. ..-.+...+
T Consensus 94 gk~irs--------wKa~He~Pvi~ma~~~~g~LlA-------------tggaD~~v~VWdi~~~~-----~th~fkG~g 147 (775)
T KOG0319|consen 94 GKLIRS--------WKAIHEAPVITMAFDPTGTLLA-------------TGGADGRVKVWDIKNGY-----CTHSFKGHG 147 (775)
T ss_pred chHhHh--------HhhccCCCeEEEEEcCCCceEE-------------eccccceEEEEEeeCCE-----EEEEecCCC
Confidence 754432 22211223 6777774333 12233356666666552 122233222
Q ss_pred eEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCE
Q psy463 169 FTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPV 248 (790)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~ 248 (790)
..+ ....+.+.-..-+++... ....++++|+..+.. -+ ..+. ....-
T Consensus 148 GvV-ssl~F~~~~~~~lL~sg~-----------~D~~v~vwnl~~~~t-cl---~~~~-----------------~H~S~ 194 (775)
T KOG0319|consen 148 GVV-SSLLFHPHWNRWLLASGA-----------TDGTVRVWNLNDKRT-CL---HTMI-----------------LHKSA 194 (775)
T ss_pred ceE-EEEEeCCccchhheeecC-----------CCceEEEEEcccCch-HH---HHHH-----------------hhhhh
Confidence 222 223333332221222221 225777778775431 00 1111 33445
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccC---CC-EEEEEEccccccCCC
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSD---GK-KMLLILSHNQESDGS 324 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spD---g~-~i~~~~~~~~~~~g~ 324 (790)
+..+.+++|+.-+....|+.- +++.|+..-++..+...- +...+..+-++ ++ .++++++ .+|
T Consensus 195 vtsL~~~~d~~~~ls~~RDkv---i~vwd~~~~~~l~~lp~y------e~~E~vv~l~~~~~~~~~~~~TaG----~~g- 260 (775)
T KOG0319|consen 195 VTSLAFSEDSLELLSVGRDKV---IIVWDLVQYKKLKTLPLY------ESLESVVRLREELGGKGEYIITAG----GSG- 260 (775)
T ss_pred eeeeeeccCCceEEEeccCcE---EEEeehhhhhhhheechh------hheeeEEEechhcCCcceEEEEec----CCc-
Confidence 678999999997777777653 778887544333222210 00223444443 33 1333555 345
Q ss_pred CCcCcccEEEEEEcCCCCcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463 325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC 403 (790)
Q Consensus 325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~ 403 (790)
.+..+|.++++- ....... .-+........-.++ ++..+++ .+|+.++.+. . .++.
T Consensus 261 -------~~~~~d~es~~~-----~~~~~~~~~~e~~~~~~~~~~~~-~l~vtae-----Qnl~l~d~~~--l---~i~k 317 (775)
T KOG0319|consen 261 -------VVQYWDSESGKC-----VYKQRQSDSEEIDHLLAIESMSQ-LLLVTAE-----QNLFLYDEDE--L---TIVK 317 (775)
T ss_pred -------eEEEEecccchh-----hhhhccCCchhhhcceeccccCc-eEEEEcc-----ceEEEEEccc--c---EEeh
Confidence 577788877651 1111111 111222122223344 4444444 5677776544 2 1222
Q ss_pred cccccCCCcccEEEEE-EecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463 404 DLLTSANQKCSYSGAT-FSTNVSYYVLSCIGPGIPEIMLFDKTGQ 447 (790)
Q Consensus 404 ~~~~~~~~~~~~~~~~-~s~dg~~~~~~~~~~~~~~i~~~~~~~~ 447 (790)
.+ ++.+..+.... +.|+.++++...+. |++.+++..+-
T Consensus 318 ~i---vG~ndEI~Dm~~lG~e~~~laVATNs---~~lr~y~~~~~ 356 (775)
T KOG0319|consen 318 QI---VGYNDEILDMKFLGPEESHLAVATNS---PELRLYTLPTS 356 (775)
T ss_pred hh---cCCchhheeeeecCCccceEEEEeCC---CceEEEecCCC
Confidence 11 22444555555 56777777776443 44666666553
No 301
>KOG0640|consensus
Probab=97.09 E-value=0.037 Score=53.51 Aligned_cols=77 Identities=10% Similarity=0.124 Sum_probs=47.5
Q ss_pred CCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463 246 EPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS 324 (790)
Q Consensus 246 ~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~ 324 (790)
...+..+.+|+.|+ ++.-+..+. |.+.|--+++|..-....-+..- .-+..|+.|||+|. ... .+.
T Consensus 261 t~ai~~V~Ys~t~~lYvTaSkDG~----IklwDGVS~rCv~t~~~AH~gse---vcSa~Ftkn~kyiL-sSG----~DS- 327 (430)
T KOG0640|consen 261 TGAITQVRYSSTGSLYVTASKDGA----IKLWDGVSNRCVRTIGNAHGGSE---VCSAVFTKNGKYIL-SSG----KDS- 327 (430)
T ss_pred ccceeEEEecCCccEEEEeccCCc----EEeeccccHHHHHHHHhhcCCce---eeeEEEccCCeEEe-ecC----Ccc-
Confidence 34567899999999 555544443 88888777777544433211111 33789999999775 322 333
Q ss_pred CCcCcccEEEEEEcCCCC
Q psy463 325 TPVDSWDHLTFIDLDDQA 342 (790)
Q Consensus 325 ~~~~~~~~l~~~d~~~~~ 342 (790)
-++++.+.+|.
T Consensus 328 -------~vkLWEi~t~R 338 (430)
T KOG0640|consen 328 -------TVKLWEISTGR 338 (430)
T ss_pred -------eeeeeeecCCc
Confidence 45666666665
No 302
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.09 E-value=0.0025 Score=69.42 Aligned_cols=117 Identities=15% Similarity=0.184 Sum_probs=68.6
Q ss_pred ccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCC----ccchhHHHHHHHHHHH
Q psy463 501 YPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLG----TVEIYDQINVTRYLQE 576 (790)
Q Consensus 501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~----~~~~~D~~~~~~~l~~ 576 (790)
.|++|++-| -+... .......+...++.+.|-.|++...|--|.+ .++......++. .+.+.|++..++++..
T Consensus 29 gpifl~~gg-E~~~~-~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S-~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~ 105 (434)
T PF05577_consen 29 GPIFLYIGG-EGPIE-PFWINNGFMWELAKEFGALVVALEHRYYGKS-QPFGDLSTENLRYLTSEQALADLAYFIRYVKK 105 (434)
T ss_dssp SEEEEEE---SS-HH-HHHHH-HHHHHHHHHHTEEEEEE--TTSTTB--TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCccc-hhhhcCChHHHHHHHcCCcEEEeehhhhcCC-CCccccchhhHHhcCHHHHHHHHHHHHHHHHH
Confidence 688888744 33211 1111122455677778999999999964432 222222222221 2457888888888886
Q ss_pred hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463 577 NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTD 621 (790)
Q Consensus 577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~ 621 (790)
+....+..+++++|.||||.+|+++-.++|. .+.++++.+++..
T Consensus 106 ~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~-~~~ga~ASSapv~ 149 (434)
T PF05577_consen 106 KYNTAPNSPWIVFGGSYGGALAAWFRLKYPH-LFDGAWASSAPVQ 149 (434)
T ss_dssp HTTTGCC--EEEEEETHHHHHHHHHHHH-TT-T-SEEEEET--CC
T ss_pred hhcCCCCCCEEEECCcchhHHHHHHHhhCCC-eeEEEEeccceee
Confidence 5544556799999999999999999999997 7777776666543
No 303
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.06 E-value=0.039 Score=59.17 Aligned_cols=63 Identities=16% Similarity=0.139 Sum_probs=50.8
Q ss_pred CccEEEEecCCCcccchhhhHHHHHHHHhcC--------------------Cc-eEEEEcCCCCCcCCCcchHHHHHHHH
Q psy463 725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHAD--------------------IM-FQSQTYPDEEHGLIGVRPHFYHTLER 783 (790)
Q Consensus 725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g--------------------~~-~~~~~~p~~~H~~~~~~~~~~~~i~~ 783 (790)
..++||..|..|.+|+....+.+.+.|.-.+ .. ..++.+-++||+....++..+..+..
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~qP~~al~m~~~ 426 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 426 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCCCHHHHHHHHHH
Confidence 5799999999999999999999888875211 11 56677788999995588889999999
Q ss_pred HHHH
Q psy463 784 FLDS 787 (790)
Q Consensus 784 fl~~ 787 (790)
|+..
T Consensus 427 Fi~~ 430 (433)
T PLN03016 427 WISG 430 (433)
T ss_pred HHcC
Confidence 9864
No 304
>KOG2315|consensus
Probab=97.05 E-value=0.016 Score=60.58 Aligned_cols=152 Identities=16% Similarity=0.262 Sum_probs=85.6
Q ss_pred EeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEE
Q psy463 175 LAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNW 254 (790)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~w 254 (790)
+.|+..+..+++..+. .-.....-......||+++.++... . .+|. -.+-+..+.|
T Consensus 223 m~WN~~gt~LLvLast-dVDktn~SYYGEq~Lyll~t~g~s~-~----V~L~------------------k~GPVhdv~W 278 (566)
T KOG2315|consen 223 MKWNKLGTALLVLAST-DVDKTNASYYGEQTLYLLATQGESV-S----VPLL------------------KEGPVHDVTW 278 (566)
T ss_pred EEeccCCceEEEEEEE-eecCCCccccccceEEEEEecCceE-E----EecC------------------CCCCceEEEE
Confidence 5677666654444443 2222222234457899999884322 2 2332 3456788999
Q ss_pred ccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEE
Q psy463 255 ANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHL 333 (790)
Q Consensus 255 spDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l 333 (790)
+|+|+ ......- . ...+.+.|+. |..++.-.. ++.....|||-|+.|+ ++..+ +-.| ++
T Consensus 279 ~~s~~EF~VvyGf-M-PAkvtifnlr---~~~v~df~e-----gpRN~~~fnp~g~ii~-lAGFG-NL~G--------~m 338 (566)
T KOG2315|consen 279 SPSGREFAVVYGF-M-PAKVTIFNLR---GKPVFDFPE-----GPRNTAFFNPHGNIIL-LAGFG-NLPG--------DM 338 (566)
T ss_pred CCCCCEEEEEEec-c-cceEEEEcCC---CCEeEeCCC-----CCccceEECCCCCEEE-EeecC-CCCC--------ce
Confidence 99999 3332211 1 1125555543 334443321 1245788999999877 45432 1334 68
Q ss_pred EEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 334 TFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 334 ~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
-++|+...+ .|+.-...-.....|+|||++++-.+..
T Consensus 339 EvwDv~n~K--------~i~~~~a~~tt~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 339 EVWDVPNRK--------LIAKFKAANTTVFEWSPDGEYFLTATTA 375 (566)
T ss_pred EEEeccchh--------hccccccCCceEEEEcCCCcEEEEEecc
Confidence 888987644 3433322223458899999987776655
No 305
>KOG0289|consensus
Probab=96.98 E-value=0.5 Score=48.29 Aligned_cols=164 Identities=15% Similarity=0.154 Sum_probs=93.5
Q ss_pred CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
+.-+....-.|.|.++.+.+.++. +...|..+|.+-.....+. .-.+ +....|.|||--+. +.. .+|
T Consensus 303 ~~~V~~ls~h~tgeYllsAs~d~~---w~Fsd~~~g~~lt~vs~~~--s~v~-~ts~~fHpDgLifg-tgt----~d~-- 369 (506)
T KOG0289|consen 303 EEPVTGLSLHPTGEYLLSASNDGT---WAFSDISSGSQLTVVSDET--SDVE-YTSAAFHPDGLIFG-TGT----PDG-- 369 (506)
T ss_pred cccceeeeeccCCcEEEEecCCce---EEEEEccCCcEEEEEeecc--ccce-eEEeeEcCCceEEe-ccC----CCc--
Confidence 344566778889997666654432 4445666665543333221 1111 45899999996443 333 556
Q ss_pred CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecc
Q psy463 326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDL 405 (790)
Q Consensus 326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~ 405 (790)
.|-++|+..+. .......+...+.. ++|+.+|-+++..++++. +...|+..- ...+.+...
T Consensus 370 ------~vkiwdlks~~-----~~a~Fpght~~vk~-i~FsENGY~Lat~add~~-----V~lwDLRKl-~n~kt~~l~- 430 (506)
T KOG0289|consen 370 ------VVKIWDLKSQT-----NVAKFPGHTGPVKA-ISFSENGYWLATAADDGS-----VKLWDLRKL-KNFKTIQLD- 430 (506)
T ss_pred ------eEEEEEcCCcc-----ccccCCCCCCceeE-EEeccCceEEEEEecCCe-----EEEEEehhh-cccceeecc-
Confidence 68888987654 13334334445555 889999988888877743 334444220 112222221
Q ss_pred cccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463 406 LTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL 449 (790)
Q Consensus 406 ~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~ 449 (790)
....+.+.+|...|++++.. +. -=.||+++-.++..
T Consensus 431 -----~~~~v~s~~fD~SGt~L~~~--g~-~l~Vy~~~k~~k~W 466 (506)
T KOG0289|consen 431 -----EKKEVNSLSFDQSGTYLGIA--GS-DLQVYICKKKTKSW 466 (506)
T ss_pred -----ccccceeEEEcCCCCeEEee--cc-eeEEEEEecccccc
Confidence 23367788999999998776 22 23455555444433
No 306
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.97 E-value=0.0015 Score=54.49 Aligned_cols=59 Identities=19% Similarity=0.277 Sum_probs=52.8
Q ss_pred CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463 725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS 787 (790)
Q Consensus 725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~ 787 (790)
..|+|++.++.|+.+|.+.++.+.+.|..+ +++.+++.||.... ...-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s----~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGS----RLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCc----eEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 589999999999999999999999998865 89999999999884 677888899999863
No 307
>KOG2919|consensus
Probab=96.97 E-value=0.082 Score=51.65 Aligned_cols=158 Identities=14% Similarity=0.158 Sum_probs=86.1
Q ss_pred cCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEE
Q psy463 256 NESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTF 335 (790)
Q Consensus 256 pDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~ 335 (790)
|+..+++.++|.+. |.++|.-+|+.+.-+..-....-+....+..|||||.+|+ ..- .+-|.+
T Consensus 121 P~t~l~a~ssr~~P---Ih~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlf-aGy-------------krcirv 183 (406)
T KOG2919|consen 121 PSTNLFAVSSRDQP---IHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLF-AGY-------------KRCIRV 183 (406)
T ss_pred CccceeeeccccCc---eeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEe-ecc-------------cceEEE
Confidence 44446666666654 9999999998875543210000001135789999999987 222 235777
Q ss_pred EEc-CCCCcccCCCcccccCCCeE---EeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCC
Q psy463 336 IDL-DDQAGIKDKVPVPLTRGRFT---VTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQ 411 (790)
Q Consensus 336 ~d~-~~~~~~~~~~~~~lt~~~~~---~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~ 411 (790)
+|. ..|..+. ....++++... +.+-++++|-....+-....+. ...||.- .+ ..+-.+- .+.
T Consensus 184 Fdt~RpGr~c~--vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q--~~giy~~--~~--~~pl~ll------ggh 249 (406)
T KOG2919|consen 184 FDTSRPGRDCP--VYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQ--RVGIYND--DG--RRPLQLL------GGH 249 (406)
T ss_pred eeccCCCCCCc--chhhhhcccccccceeeeeeccCCCCcceeeecccc--eeeeEec--CC--CCceeee------ccc
Confidence 776 3333111 12234454333 2333678886654443333321 1444432 22 2222222 236
Q ss_pred cccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463 412 KCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG 446 (790)
Q Consensus 412 ~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~ 446 (790)
.+++....|-+||..+ |+-.+ .-+.|...|++.
T Consensus 250 ~gGvThL~~~edGn~l-fsGaR-k~dkIl~WDiR~ 282 (406)
T KOG2919|consen 250 GGGVTHLQWCEDGNKL-FSGAR-KDDKILCWDIRY 282 (406)
T ss_pred CCCeeeEEeccCcCee-ccccc-CCCeEEEEeehh
Confidence 7788999999999976 33222 256777777754
No 308
>KOG0295|consensus
Probab=96.96 E-value=0.16 Score=50.58 Aligned_cols=162 Identities=15% Similarity=0.221 Sum_probs=97.6
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
+.++.++.+.+-|-|..+....|++. |...+..+|-|...+... ..|.. -++.+-||.-++ ..+ .
T Consensus 191 gh~h~vS~V~f~P~gd~ilS~srD~t---ik~We~~tg~cv~t~~~h--~ewvr---~v~v~~DGti~A-s~s----~-- 255 (406)
T KOG0295|consen 191 GHEHGVSSVFFLPLGDHILSCSRDNT---IKAWECDTGYCVKTFPGH--SEWVR---MVRVNQDGTIIA-SCS----N-- 255 (406)
T ss_pred CcccceeeEEEEecCCeeeecccccc---eeEEecccceeEEeccCc--hHhEE---EEEecCCeeEEE-ecC----C--
Confidence 66788899999999997777777654 888899999887666543 44654 678888998665 444 2
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCC--------------EEEEEEcCCCCceEEEEEE
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKEN--------------NVYFLSTQGSPIVQHMYRI 389 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~--------------~l~~~~~~~~~~~~~l~~~ 389 (790)
-.+|.++-+++++ ....|+..+..+.- .+|.|... .+.+...+. +..++|
T Consensus 256 ------dqtl~vW~~~t~~-----~k~~lR~hEh~vEc-i~wap~~~~~~i~~at~~~~~~~~l~s~SrD--ktIk~w-- 319 (406)
T KOG0295|consen 256 ------DQTLRVWVVATKQ-----CKAELREHEHPVEC-IAWAPESSYPSISEATGSTNGGQVLGSGSRD--KTIKIW-- 319 (406)
T ss_pred ------CceEEEEEeccch-----hhhhhhccccceEE-EEecccccCcchhhccCCCCCccEEEeeccc--ceEEEE--
Confidence 2356666666664 12234544444433 55655432 122222211 113333
Q ss_pred EcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463 390 NIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ 447 (790)
Q Consensus 390 ~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~ 447 (790)
++.. + .||-. +.+....+.+++|+|.|+||+-..+.. .+.++|+..+
T Consensus 320 dv~t--g--~cL~t----L~ghdnwVr~~af~p~Gkyi~ScaDDk---tlrvwdl~~~ 366 (406)
T KOG0295|consen 320 DVST--G--MCLFT----LVGHDNWVRGVAFSPGGKYILSCADDK---TLRVWDLKNL 366 (406)
T ss_pred eccC--C--eEEEE----EecccceeeeeEEcCCCeEEEEEecCC---cEEEEEeccc
Confidence 3322 1 34332 344667888999999999985444433 3677777653
No 309
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=96.91 E-value=0.43 Score=47.71 Aligned_cols=188 Identities=12% Similarity=0.078 Sum_probs=106.1
Q ss_pred EEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463 250 SRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD 328 (790)
Q Consensus 250 ~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~ 328 (790)
..+..+|+.. .+++..|.... ++++|..+|+.......+....+ ++.-.|||||+.|| +...+. ..|
T Consensus 8 H~~a~~p~~~~avafaRRPG~~--~~v~D~~~g~~~~~~~a~~gRHF---yGHg~fs~dG~~Ly-tTEnd~-~~g----- 75 (305)
T PF07433_consen 8 HGVAAHPTRPEAVAFARRPGTF--ALVFDCRTGQLLQRLWAPPGRHF---YGHGVFSPDGRLLY-TTENDY-ETG----- 75 (305)
T ss_pred cceeeCCCCCeEEEEEeCCCcE--EEEEEcCCCceeeEEcCCCCCEE---ecCEEEcCCCCEEE-Eecccc-CCC-----
Confidence 4577899655 88888887654 78888899887665554432322 56899999999887 443221 223
Q ss_pred cccEEEEEEcCCCCcccCCCccc---ccCCCeEEeEEEeeecCCCEEEEEEcC--CCC-----------ceEEEEEEEcC
Q psy463 329 SWDHLTFIDLDDQAGIKDKVPVP---LTRGRFTVTEILAWDEKENNVYFLSTQ--GSP-----------IVQHMYRINIA 392 (790)
Q Consensus 329 ~~~~l~~~d~~~~~~~~~~~~~~---lt~~~~~~~~~~~~s~dg~~l~~~~~~--~~~-----------~~~~l~~~~~~ 392 (790)
.-.|-++|+..+ .+. ...+... ...+.|.|||++|++.... -+| +...|..++..
T Consensus 76 -~G~IgVyd~~~~-------~~ri~E~~s~GIG-PHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~ 146 (305)
T PF07433_consen 76 -RGVIGVYDAARG-------YRRIGEFPSHGIG-PHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDAR 146 (305)
T ss_pred -cEEEEEEECcCC-------cEEEeEecCCCcC-hhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecC
Confidence 457889998732 222 2222211 1236789999888775332 111 22345555544
Q ss_pred CCCCC-cce--eeecccccCCCcccEEEEEEecCCcEEEEE-eecCC---CCeEEEEecCCCeEEEeccchhHHHhhccC
Q psy463 393 DPTAT-PEC--ITCDLLTSANQKCSYSGATFSTNVSYYVLS-CIGPG---IPEIMLFDKTGQRLLYWDTNEDLRTALTNI 465 (790)
Q Consensus 393 ~~~~~-~~~--lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~-~~~~~---~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~ 465 (790)
+ |+ .++ |... ..+-.+.-.++++||..++.. +.+.. +|-+.+.+.. +..+.+...++....+.+|
T Consensus 147 s--G~ll~q~~Lp~~-----~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g-~~~~~~~~p~~~~~~l~~Y 218 (305)
T PF07433_consen 147 S--GALLEQVELPPD-----LHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRG-GALRLLPAPEEQWRRLNGY 218 (305)
T ss_pred C--CceeeeeecCcc-----ccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCC-CcceeccCChHHHHhhCCc
Confidence 4 33 222 2111 123355667889998754332 33332 5655555433 3355555555555556655
Q ss_pred C
Q psy463 466 T 466 (790)
Q Consensus 466 ~ 466 (790)
.
T Consensus 219 ~ 219 (305)
T PF07433_consen 219 I 219 (305)
T ss_pred e
Confidence 3
No 310
>KOG0296|consensus
Probab=96.91 E-value=0.058 Score=53.53 Aligned_cols=166 Identities=12% Similarity=0.090 Sum_probs=99.6
Q ss_pred CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463 245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS 324 (790)
Q Consensus 245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~ 324 (790)
.......++.+|+.++++.- .+.+ .-|+.+..+|+. +.... +..+......||-||..|+ +. +-+|
T Consensus 63 H~~svFavsl~P~~~l~aTG-GgDD--~AflW~~~~ge~--~~elt---gHKDSVt~~~FshdgtlLA-TG----dmsG- 128 (399)
T KOG0296|consen 63 HTDSVFAVSLHPNNNLVATG-GGDD--LAFLWDISTGEF--AGELT---GHKDSVTCCSFSHDGTLLA-TG----DMSG- 128 (399)
T ss_pred cCCceEEEEeCCCCceEEec-CCCc--eEEEEEccCCcc--eeEec---CCCCceEEEEEccCceEEE-ec----CCCc-
Confidence 34557788999966655433 2222 366777777763 22221 1112255789999999777 44 3567
Q ss_pred CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeec
Q psy463 325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCD 404 (790)
Q Consensus 325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~ 404 (790)
.|.++...++. ....|- ....-...+.|.|.+..+++-+.+ ..||...+.. +....+..
T Consensus 129 -------~v~v~~~stg~-----~~~~~~-~e~~dieWl~WHp~a~illAG~~D-----GsvWmw~ip~--~~~~kv~~- 187 (399)
T KOG0296|consen 129 -------KVLVFKVSTGG-----EQWKLD-QEVEDIEWLKWHPRAHILLAGSTD-----GSVWMWQIPS--QALCKVMS- 187 (399)
T ss_pred -------cEEEEEcccCc-----eEEEee-cccCceEEEEecccccEEEeecCC-----CcEEEEECCC--cceeeEec-
Confidence 67777777765 122342 222222348999988866666666 4566666655 22223333
Q ss_pred ccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC-eEEEec
Q psy463 405 LLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ-RLLYWD 453 (790)
Q Consensus 405 ~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~ 453 (790)
+++.......|.|||+.++..++.. .|.+++..++ .+..++
T Consensus 188 -----Gh~~~ct~G~f~pdGKr~~tgy~dg---ti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 188 -----GHNSPCTCGEFIPDGKRILTGYDDG---TIIVWNPKTGQPLHKIT 229 (399)
T ss_pred -----CCCCCcccccccCCCceEEEEecCc---eEEEEecCCCceeEEec
Confidence 2566667788999999998776643 4777777664 334333
No 311
>KOG4840|consensus
Probab=96.91 E-value=0.02 Score=52.79 Aligned_cols=109 Identities=17% Similarity=0.073 Sum_probs=68.5
Q ss_pred cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCC-ChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463 502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSAL-KGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY 580 (790)
Q Consensus 502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~-~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 580 (790)
-.|||+ ||.+.....-.+. ......+.+.+|.++.+..+.+.. +|..- ...+++|+..+++++.. .+
T Consensus 37 ~~vvfi-GGLgdgLl~~~y~-~~L~~~lde~~wslVq~q~~Ssy~G~Gt~s--------lk~D~edl~~l~~Hi~~-~~- 104 (299)
T KOG4840|consen 37 VKVVFI-GGLGDGLLICLYT-TMLNRYLDENSWSLVQPQLRSSYNGYGTFS--------LKDDVEDLKCLLEHIQL-CG- 104 (299)
T ss_pred EEEEEE-cccCCCccccccH-HHHHHHHhhccceeeeeecccccccccccc--------ccccHHHHHHHHHHhhc-cC-
Confidence 345565 4444422222222 223344556899999998875432 33221 11567888888886654 23
Q ss_pred cCCCceEEEEechHHHHHHHHHhcC-CCCceEEEEEeCCCCCcc
Q psy463 581 IDKTRTAIWGWSYGGYATGLALALD-PSNVFKCGISVAPVTDWI 623 (790)
Q Consensus 581 ~d~~ri~i~G~S~GG~~a~~~a~~~-p~~~~~~~v~~~~~~~~~ 623 (790)
. ..+|+++|||-|..-.+++++.. .++.+.++|+.+|+++..
T Consensus 105 f-St~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 105 F-STDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred c-ccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 2 24899999999999888887432 234677999999999876
No 312
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=96.88 E-value=0.0034 Score=60.00 Aligned_cols=90 Identities=12% Similarity=0.048 Sum_probs=47.6
Q ss_pred EEEEcCCCCccccccccccchHHHHHhcCCeE---EEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCC
Q psy463 504 LIHVYGGPSSFQVTERFSVDWNLYLADNKDIV---VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPY 580 (790)
Q Consensus 504 vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~---v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 580 (790)
||++||..+.. ...|. .....+.++||. |++++|-.... ........ .....+.++.+.++.+++ +
T Consensus 4 VVlVHG~~~~~--~~~w~--~~~~~l~~~GY~~~~vya~tyg~~~~-~~~~~~~~---~~~~~~~~l~~fI~~Vl~---~ 72 (219)
T PF01674_consen 4 VVLVHGTGGNA--YSNWS--TLAPYLKAAGYCDSEVYALTYGSGNG-SPSVQNAH---MSCESAKQLRAFIDAVLA---Y 72 (219)
T ss_dssp EEEE--TTTTT--CGGCC--HHHHHHHHTT--CCCEEEE--S-CCH-HTHHHHHH---B-HHHHHHHHHHHHHHHH---H
T ss_pred EEEECCCCcch--hhCHH--HHHHHHHHcCCCcceeEeccCCCCCC-CCcccccc---cchhhHHHHHHHHHHHHH---h
Confidence 67999987632 33444 333444458999 79999844322 11111110 111234566666777666 3
Q ss_pred cCCCceEEEEechHHHHHHHHHhcC
Q psy463 581 IDKTRTAIWGWSYGGYATGLALALD 605 (790)
Q Consensus 581 ~d~~ri~i~G~S~GG~~a~~~a~~~ 605 (790)
... ||-|+||||||.++-+++...
T Consensus 73 TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 73 TGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HT---EEEEEETCHHHHHHHHHHHC
T ss_pred hCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 446 999999999999998887643
No 313
>KOG3975|consensus
Probab=96.87 E-value=0.13 Score=48.78 Aligned_cols=58 Identities=9% Similarity=0.012 Sum_probs=42.7
Q ss_pred CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHH
Q psy463 725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFL 785 (790)
Q Consensus 725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl 785 (790)
.+-+-+..|+.|.-||......+-+.+++. ++++.+ .+..|.|-- +.+.....+.+.|
T Consensus 242 ~d~l~Fyygt~DgW~p~~~~d~~kdd~~ee--d~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 242 LDSLWFYYGTNDGWVPSHYYDYYKDDVPEE--DLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred CcEEEEEccCCCCCcchHHHHHHhhhcchh--ceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 578899999999999987777777777665 345555 678898876 6666666665544
No 314
>KOG1273|consensus
Probab=96.85 E-value=0.26 Score=48.17 Aligned_cols=157 Identities=10% Similarity=0.099 Sum_probs=85.7
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
..-.-+..++||+||+.+..++|+. .|.+.|+..|.+-.-..-. .+.-...|.|-.+..++... -..
T Consensus 63 aH~~pi~sl~WS~dgr~LltsS~D~---si~lwDl~~gs~l~rirf~------spv~~~q~hp~k~n~~va~~----~~~ 129 (405)
T KOG1273|consen 63 AHVRPITSLCWSRDGRKLLTSSRDW---SIKLWDLLKGSPLKRIRFD------SPVWGAQWHPRKRNKCVATI----MEE 129 (405)
T ss_pred ccccceeEEEecCCCCEeeeecCCc---eeEEEeccCCCceeEEEcc------CccceeeeccccCCeEEEEE----ecC
Confidence 4455688999999999655555543 3888999888753222111 11224566665444442222 111
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCe-EEeEE---EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF-TVTEI---LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE 399 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~-~~~~~---~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 399 (790)
.-+++++..++ .+.|...+. +.... ..+++.|++|+.-... ..|..++..+ .+
T Consensus 130 --------sp~vi~~s~~~------h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsK-----Gkllv~~a~t----~e 186 (405)
T KOG1273|consen 130 --------SPVVIDFSDPK------HSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSK-----GKLLVYDAET----LE 186 (405)
T ss_pred --------CcEEEEecCCc------eeeccCCCccccccccccccccCCCCEEEEecCc-----ceEEEEecch----he
Confidence 13455554443 444443321 11111 2378889977765555 4566666544 23
Q ss_pred eeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeE
Q psy463 400 CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEI 439 (790)
Q Consensus 400 ~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i 439 (790)
|+..--.+ ....+-+..+|..|+.+++.++.+....+
T Consensus 187 ~vas~rit---s~~~IK~I~~s~~g~~liiNtsDRvIR~y 223 (405)
T KOG1273|consen 187 CVASFRIT---SVQAIKQIIVSRKGRFLIINTSDRVIRTY 223 (405)
T ss_pred eeeeeeec---hheeeeEEEEeccCcEEEEecCCceEEEE
Confidence 43321111 11245568899999999988777763333
No 315
>KOG2931|consensus
Probab=96.84 E-value=0.047 Score=53.02 Aligned_cols=248 Identities=10% Similarity=0.006 Sum_probs=129.4
Q ss_pred CCccEEEEEcCCCCcccc--ccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHH
Q psy463 499 KKYPLLIHVYGGPSSFQV--TERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQE 576 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~--~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 576 (790)
.++|+++-.|.-+-.... ..-|...-+..+.. .|+|+-+|.+|.-.-.. .....+..-.++++.+.+-.+.+
T Consensus 44 ~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~--~fcv~HV~~PGqe~gAp----~~p~~y~yPsmd~LAd~l~~VL~ 117 (326)
T KOG2931|consen 44 GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE--HFCVYHVDAPGQEDGAP----SFPEGYPYPSMDDLADMLPEVLD 117 (326)
T ss_pred CCCceEEEecccccchHhHhHHhhcCHhHHHHHh--heEEEecCCCccccCCc----cCCCCCCCCCHHHHHHHHHHHHH
Confidence 367889999986543210 01111122233443 39999999998643211 11222223457888888888877
Q ss_pred hCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcccccccchhhhc-------CCCCccCchhhhhhc
Q psy463 577 NLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWIYYDTIYSERYM-------GLPTFEDNLEGYKIA 649 (790)
Q Consensus 577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~ 649 (790)
+++ -+.|.-+|--.|+++-..+|..||+ ++-++|++++...-.....+..+++. |.. .. ...|.
T Consensus 118 ~f~---lk~vIg~GvGAGAyIL~rFAl~hp~-rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~Gmt--~~-~~d~l-- 188 (326)
T KOG2931|consen 118 HFG---LKSVIGMGVGAGAYILARFALNHPE-RVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYGMT--QG-VKDYL-- 188 (326)
T ss_pred hcC---cceEEEecccccHHHHHHHHhcChh-heeEEEEEecCCCCchHHHHHHHHHHHHHHHhhchh--hh-HHHHH--
Confidence 444 5789999999999999999999986 88888888775443221111111111 111 00 00000
Q ss_pred cccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHh----cCcchhcccccCCCCcCCcchhhhhhhhhhhhhccCC
Q psy463 650 ALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQH----ADIMFQSQRYMGLPTFEDNLEGYKIAALNNKVDRIRD 725 (790)
Q Consensus 650 ~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 725 (790)
..+.+- + +...+ ..+-..+..+.+.. .++......|.+.......... ....+ +
T Consensus 189 ----l~H~Fg-~-------e~~~~-~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~--------~~~tl-k 246 (326)
T KOG2931|consen 189 ----LAHHFG-K-------EELGN-NSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPK--------LGTTL-K 246 (326)
T ss_pred ----HHHHhc-c-------ccccc-cHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCC--------cCccc-c
Confidence 000000 0 00000 00000111111111 1111122222222211111000 01134 7
Q ss_pred ccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHHHH
Q psy463 726 KQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFLDS 787 (790)
Q Consensus 726 ~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl~~ 787 (790)
||+|++.|.+-+.+ +.+.++...|.. ....++.+.++|-.+.. .+..+.+.+.-||+-
T Consensus 247 c~vllvvGd~Sp~~--~~vv~~n~~Ldp--~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 247 CPVLLVVGDNSPHV--SAVVECNSKLDP--TYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred ccEEEEecCCCchh--hhhhhhhcccCc--ccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 99999999987643 345555555543 24578888999888887 888888999888863
No 316
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=96.75 E-value=0.003 Score=41.80 Aligned_cols=32 Identities=9% Similarity=0.052 Sum_probs=21.0
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccC--cceEEEE
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQ--NRARITR 275 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~--~~~~i~~ 275 (790)
........+.|||||+.++++.+.. +..+||+
T Consensus 6 ~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 6 NSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp -SSSSEEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred cCCccccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 5566788999999999555554444 5556664
No 317
>KOG0771|consensus
Probab=96.74 E-value=0.042 Score=55.61 Aligned_cols=65 Identities=11% Similarity=-0.020 Sum_probs=40.3
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS 316 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~ 316 (790)
.....++....|+||++++...-.. .+.++++.+-++..+..+. .. .......|+||.+.++ ..+
T Consensus 279 ~~~~siSsl~VS~dGkf~AlGT~dG---sVai~~~~~lq~~~~vk~a--H~--~~VT~ltF~Pdsr~~~-svS 343 (398)
T KOG0771|consen 279 KRFKSISSLAVSDDGKFLALGTMDG---SVAIYDAKSLQRLQYVKEA--HL--GFVTGLTFSPDSRYLA-SVS 343 (398)
T ss_pred hccCcceeEEEcCCCcEEEEeccCC---cEEEEEeceeeeeEeehhh--he--eeeeeEEEcCCcCccc-ccc
Confidence 3455788999999999666543322 2777766554444333321 11 1245789999999887 444
No 318
>KOG2110|consensus
Probab=96.74 E-value=0.17 Score=50.52 Aligned_cols=121 Identities=14% Similarity=0.204 Sum_probs=76.2
Q ss_pred CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
...+...+.++++-++++-.. .+..+++++|+.+-+....... .. +.....+|||||..|+ +++ ..|
T Consensus 129 ~~gl~AlS~n~~n~ylAyp~s-~t~GdV~l~d~~nl~~v~~I~a--H~---~~lAalafs~~G~llA-TAS----eKG-- 195 (391)
T KOG2110|consen 129 PKGLCALSPNNANCYLAYPGS-TTSGDVVLFDTINLQPVNTINA--HK---GPLAALAFSPDGTLLA-TAS----EKG-- 195 (391)
T ss_pred ccceEeeccCCCCceEEecCC-CCCceEEEEEcccceeeeEEEe--cC---CceeEEEECCCCCEEE-Eec----cCc--
Confidence 333445555555557776532 2244588888876544333321 11 1245789999999999 888 345
Q ss_pred CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEe-EEEeeecCCCEEEEEEcCCCCceEEEEEEEcC
Q psy463 326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT-EILAWDEKENNVYFLSTQGSPIVQHMYRINIA 392 (790)
Q Consensus 326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 392 (790)
+-|.++.+..|+ +...+..|..-+. ..++|+||+..|...++.+. .||++++..
T Consensus 196 -----TVIRVf~v~~G~-----kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeT---VHiFKL~~~ 250 (391)
T KOG2110|consen 196 -----TVIRVFSVPEGQ-----KLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTET---VHIFKLEKV 250 (391)
T ss_pred -----eEEEEEEcCCcc-----EeeeeeCCceeeEEEEEEECCCCCeEEEecCCCe---EEEEEeccc
Confidence 356777777766 3556666654322 23899999998877776655 888887653
No 319
>KOG0284|consensus
Probab=96.52 E-value=0.052 Score=54.64 Aligned_cols=159 Identities=14% Similarity=0.227 Sum_probs=94.8
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
..+.-+..+.||+||.++...+.+. -|...+.+-...+.+... -.+.....+|||+..+++ +++ .+|
T Consensus 136 aHDs~Vr~m~ws~~g~wmiSgD~gG---~iKyWqpnmnnVk~~~ah-----h~eaIRdlafSpnDskF~-t~S----dDg 202 (464)
T KOG0284|consen 136 AHDSPVRTMKWSHNGTWMISGDKGG---MIKYWQPNMNNVKIIQAH-----HAEAIRDLAFSPNDSKFL-TCS----DDG 202 (464)
T ss_pred hhcccceeEEEccCCCEEEEcCCCc---eEEecccchhhhHHhhHh-----hhhhhheeccCCCCceeE-Eec----CCC
Confidence 3455678899999999766555432 133333322222211110 111256899999887777 777 456
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC 403 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~ 403 (790)
.|-++|..-.+ ..++|+.+.|++.. +.|.|... +++.+.+.+ -+-..|..+ + .||..
T Consensus 203 --------~ikiWdf~~~k-----ee~vL~GHgwdVks-vdWHP~kg-LiasgskDn----lVKlWDprS--g--~cl~t 259 (464)
T KOG0284|consen 203 --------TIKIWDFRMPK-----EERVLRGHGWDVKS-VDWHPTKG-LIASGSKDN----LVKLWDPRS--G--SCLAT 259 (464)
T ss_pred --------eEEEEeccCCc-----hhheeccCCCCcce-eccCCccc-eeEEccCCc----eeEeecCCC--c--chhhh
Confidence 46777765443 26778888899887 89999865 555555432 222234433 2 34432
Q ss_pred cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463 404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT 445 (790)
Q Consensus 404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~ 445 (790)
++.....+-.+.|++++.+++...... .+.++|+.
T Consensus 260 ----lh~HKntVl~~~f~~n~N~Llt~skD~---~~kv~DiR 294 (464)
T KOG0284|consen 260 ----LHGHKNTVLAVKFNPNGNWLLTGSKDQ---SCKVFDIR 294 (464)
T ss_pred ----hhhccceEEEEEEcCCCCeeEEccCCc---eEEEEehh
Confidence 233555677899999998886653333 46677765
No 320
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.49 E-value=0.021 Score=62.19 Aligned_cols=139 Identities=17% Similarity=0.107 Sum_probs=78.1
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccc--------------cchHHHHHhcCCeEEEEEcCC-C
Q psy463 479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFS--------------VDWNLYLADNKDIVVAYIDGR-N 543 (790)
Q Consensus 479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~--------------~~~~~~~~~~~G~~v~~~d~r-G 543 (790)
.+..+.++.+...+ ..+..|+|+++.||||+..+...+. ......-.. .-..++.+|.+ |
T Consensus 22 ~~~~lfyw~~~s~~----~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~-~~an~l~iD~PvG 96 (415)
T PF00450_consen 22 ENAHLFYWFFESRN----DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWN-KFANLLFIDQPVG 96 (415)
T ss_dssp TTEEEEEEEEE-SS----GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GG-GTSEEEEE--STT
T ss_pred CCcEEEEEEEEeCC----CCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccc-cccceEEEeecCc
Confidence 56788888887665 2456799999999999754321111 000111112 24578999955 6
Q ss_pred CCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHH----hcCC-----CCceEEEE
Q psy463 544 SALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLAL----ALDP-----SNVFKCGI 614 (790)
Q Consensus 544 ~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a----~~~p-----~~~~~~~v 614 (790)
+|.+-..- ......-....++|+..+++.+...++.....++.|+|.||||..+..+| .... .-.+++++
T Consensus 97 tGfS~~~~-~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~ 175 (415)
T PF00450_consen 97 TGFSYGND-PSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIA 175 (415)
T ss_dssp STT-EESS-GGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEE
T ss_pred eEEeeccc-cccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccce
Confidence 55422111 11111111234666666666655557877777999999999998665443 3221 23588999
Q ss_pred EeCCCCCcc
Q psy463 615 SVAPVTDWI 623 (790)
Q Consensus 615 ~~~~~~~~~ 623 (790)
++.|+++..
T Consensus 176 IGng~~dp~ 184 (415)
T PF00450_consen 176 IGNGWIDPR 184 (415)
T ss_dssp EESE-SBHH
T ss_pred ecCcccccc
Confidence 999998864
No 321
>KOG4389|consensus
Probab=96.45 E-value=0.0047 Score=63.82 Aligned_cols=129 Identities=22% Similarity=0.279 Sum_probs=75.9
Q ss_pred EEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCcc
Q psy463 483 AQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTV 562 (790)
Q Consensus 483 i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~ 562 (790)
++.-++.|. .+ + .+.-++|+++||+.-.. ..+.....-..+++....+|+.++||-.. +|.-+........|..
T Consensus 121 LYlNVW~P~-~~--p-~n~tVlVWiyGGGF~sG-t~SLdvYdGk~la~~envIvVs~NYRvG~-FGFL~l~~~~eaPGNm 194 (601)
T KOG4389|consen 121 LYLNVWAPA-AD--P-YNLTVLVWIYGGGFYSG-TPSLDVYDGKFLAAVENVIVVSMNYRVGA-FGFLYLPGHPEAPGNM 194 (601)
T ss_pred eEEEEeccC-CC--C-CCceEEEEEEcCccccC-CcceeeeccceeeeeccEEEEEeeeeecc-ceEEecCCCCCCCCcc
Confidence 444556663 11 2 22348999999886432 22222222223444456778999999422 3432221122233444
Q ss_pred chhHHHHHHHHHHHh---CCCcCCCceEEEEechHHHHHH-HHHhcCCC--CceEEEEEeCCCC
Q psy463 563 EIYDQINVTRYLQEN---LPYIDKTRTAIWGWSYGGYATG-LALALDPS--NVFKCGISVAPVT 620 (790)
Q Consensus 563 ~~~D~~~~~~~l~~~---~~~~d~~ri~i~G~S~GG~~a~-~~a~~~p~--~~~~~~v~~~~~~ 620 (790)
.+-|+.-|++|+.++ +| -|+++|.++|.|.|+..+. .++. |. ..|+.+|+.+|-.
T Consensus 195 Gl~DQqLAl~WV~~Ni~aFG-Gnp~~vTLFGESAGaASv~aHLls--P~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 195 GLLDQQLALQWVQENIAAFG-GNPSRVTLFGESAGAASVVAHLLS--PGSRGLFHRAILQSGSL 255 (601)
T ss_pred chHHHHHHHHHHHHhHHHhC-CCcceEEEeccccchhhhhheecC--CCchhhHHHHHhhcCCC
Confidence 567888889998775 34 6899999999999987543 3333 32 3577777666644
No 322
>KOG0278|consensus
Probab=96.39 E-value=0.085 Score=49.61 Aligned_cols=115 Identities=5% Similarity=0.124 Sum_probs=71.4
Q ss_pred CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
+....++-.|+||+++..+.... |...|+.+-..-.-+.-+. ...+.+.+|+- .++ ++. ..++
T Consensus 184 ~s~VtSlEvs~dG~ilTia~gss----V~Fwdaksf~~lKs~k~P~------nV~SASL~P~k-~~f-VaG---ged~-- 246 (334)
T KOG0278|consen 184 NSPVTSLEVSQDGRILTIAYGSS----VKFWDAKSFGLLKSYKMPC------NVESASLHPKK-EFF-VAG---GEDF-- 246 (334)
T ss_pred CCCCcceeeccCCCEEEEecCce----eEEeccccccceeeccCcc------ccccccccCCC-ceE-Eec---Ccce--
Confidence 34456788999999877765544 7777776643322222111 14578899987 444 444 2444
Q ss_pred CcCcccEEEEEEcCCCCcccCCCcccc-cCCCeEEeEEEeeecCCCEEEEEEcC-CCCceEEEEEEEcCC
Q psy463 326 PVDSWDHLTFIDLDDQAGIKDKVPVPL-TRGRFTVTEILAWDEKENNVYFLSTQ-GSPIVQHMYRINIAD 393 (790)
Q Consensus 326 ~~~~~~~l~~~d~~~~~~~~~~~~~~l-t~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~~~l~~~~~~~ 393 (790)
.+|.+|-.+|+ .+.. .++......-+.|+|||. +|..+.. |. ..||.+....
T Consensus 247 ------~~~kfDy~Tge------Ei~~~nkgh~gpVhcVrFSPdGE-~yAsGSEDGT---irlWQt~~~~ 300 (334)
T KOG0278|consen 247 ------KVYKFDYNTGE------EIGSYNKGHFGPVHCVRFSPDGE-LYASGSEDGT---IRLWQTTPGK 300 (334)
T ss_pred ------EEEEEeccCCc------eeeecccCCCCceEEEEECCCCc-eeeccCCCce---EEEEEecCCC
Confidence 58899998887 3333 344443344489999997 5555444 44 7888876643
No 323
>KOG2183|consensus
Probab=96.35 E-value=0.012 Score=59.59 Aligned_cols=97 Identities=20% Similarity=0.254 Sum_probs=64.2
Q ss_pred chHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhh---ccCC----ccchhHHHHHHHHHHHhCCCcCCCceEEEEechHH
Q psy463 523 DWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGY---RRLG----TVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGG 595 (790)
Q Consensus 523 ~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~---~~~~----~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG 595 (790)
.++..++.+.+..++.+..|--|. ..+|....+ ...+ .+.+.|.+..+..++.. .......|+++|.||||
T Consensus 101 GFm~D~Ap~~~AllVFaEHRyYGe-S~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~-~~a~~~pvIafGGSYGG 178 (492)
T KOG2183|consen 101 GFMWDLAPELKALLVFAEHRYYGE-SLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRD-LSAEASPVIAFGGSYGG 178 (492)
T ss_pred chHHhhhHhhCceEEEeehhcccc-CCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhc-cccccCcEEEecCchhh
Confidence 355566777788899999885332 112222211 2222 24577888888888773 33456799999999999
Q ss_pred HHHHHHHhcCCCCceEEEEEeCCCCC
Q psy463 596 YATGLALALDPSNVFKCGISVAPVTD 621 (790)
Q Consensus 596 ~~a~~~a~~~p~~~~~~~v~~~~~~~ 621 (790)
++++++=.++|.-...++.+.+|+.-
T Consensus 179 MLaAWfRlKYPHiv~GAlAaSAPvl~ 204 (492)
T KOG2183|consen 179 MLAAWFRLKYPHIVLGALAASAPVLY 204 (492)
T ss_pred HHHHHHHhcChhhhhhhhhccCceEe
Confidence 99999999999633445556667643
No 324
>KOG0639|consensus
Probab=96.33 E-value=0.065 Score=55.33 Aligned_cols=221 Identities=12% Similarity=0.158 Sum_probs=123.5
Q ss_pred ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463 115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES 194 (790)
Q Consensus 115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (790)
..+|||+.|+. ||....|-+.||...+. .++.+||.-.-.+. -++.+++.+ +.|...+.
T Consensus 472 kL~pdgrtLiv-------------GGeastlsiWDLAapTp---rikaeltssapaCy-ALa~spDak--vcFsccsd-- 530 (705)
T KOG0639|consen 472 KLLPDGRTLIV-------------GGEASTLSIWDLAAPTP---RIKAELTSSAPACY-ALAISPDAK--VCFSCCSD-- 530 (705)
T ss_pred EecCCCceEEe-------------ccccceeeeeeccCCCc---chhhhcCCcchhhh-hhhcCCccc--eeeeeccC--
Confidence 56899998885 34456788888876641 34566665432222 345666665 66665531
Q ss_pred CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEE
Q psy463 195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARIT 274 (790)
Q Consensus 195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~ 274 (790)
.+|-+.|+..... .+++. ........+..|+||..+ |+..-++ .+.
T Consensus 531 ---------GnI~vwDLhnq~~-----Vrqfq-----------------GhtDGascIdis~dGtkl-WTGGlDn--tvR 576 (705)
T KOG0639|consen 531 ---------GNIAVWDLHNQTL-----VRQFQ-----------------GHTDGASCIDISKDGTKL-WTGGLDN--TVR 576 (705)
T ss_pred ---------CcEEEEEccccee-----eeccc-----------------CCCCCceeEEecCCCcee-ecCCCcc--cee
Confidence 4677778776432 23333 445556778889998733 3322222 244
Q ss_pred EEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccC
Q psy463 275 RCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR 354 (790)
Q Consensus 275 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~ 354 (790)
-+|+..+.. +.+. .+.....+...+|.|.+++ +.. .++ ++++....+.+ ..+|..
T Consensus 577 cWDlregrq--lqqh----dF~SQIfSLg~cP~~dWla-vGM----ens--------~vevlh~skp~------kyqlhl 631 (705)
T KOG0639|consen 577 CWDLREGRQ--LQQH----DFSSQIFSLGYCPTGDWLA-VGM----ENS--------NVEVLHTSKPE------KYQLHL 631 (705)
T ss_pred ehhhhhhhh--hhhh----hhhhhheecccCCCcccee-eec----ccC--------cEEEEecCCcc------ceeecc
Confidence 445554432 2111 1112244677899999998 454 334 57777766555 667777
Q ss_pred CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463 355 GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLS 430 (790)
Q Consensus 355 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~ 430 (790)
.+--+.+ +.|++=|++++-++-++- -..|+......-.+.+ ....+.+-.+|.|.++||..
T Consensus 632 heScVLS-lKFa~cGkwfvStGkDnl---LnawrtPyGasiFqsk-----------E~SsVlsCDIS~ddkyIVTG 692 (705)
T KOG0639|consen 632 HESCVLS-LKFAYCGKWFVSTGKDNL---LNAWRTPYGASIFQSK-----------ESSSVLSCDISFDDKYIVTG 692 (705)
T ss_pred cccEEEE-EEecccCceeeecCchhh---hhhccCccccceeecc-----------ccCcceeeeeccCceEEEec
Confidence 6654554 788999996554443321 3455544322100110 11233344677888877553
No 325
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.26 E-value=0.11 Score=52.94 Aligned_cols=154 Identities=16% Similarity=0.171 Sum_probs=82.5
Q ss_pred EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463 250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS 329 (790)
Q Consensus 250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~ 329 (790)
..|.|.|+...++|++-..+ +|+.++.++|+.+........ ........+|. |+ .+. .|
T Consensus 28 EgP~w~~~~~~L~w~DI~~~--~i~r~~~~~g~~~~~~~p~~~------~~~~~~d~~g~-Lv-~~~-----~g------ 86 (307)
T COG3386 28 EGPVWDPDRGALLWVDILGG--RIHRLDPETGKKRVFPSPGGF------SSGALIDAGGR-LI-ACE-----HG------ 86 (307)
T ss_pred cCccCcCCCCEEEEEeCCCC--eEEEecCCcCceEEEECCCCc------ccceeecCCCe-EE-EEc-----cc------
Confidence 35789999998888765432 499999988876654433210 12233344443 43 232 33
Q ss_pred ccEEEEEEcCCCCcccCCCc-ccccCCCeE----EeEEEeeecCCCEEEEEEcC-------CCCceEEEEEEEcCCCCCC
Q psy463 330 WDHLTFIDLDDQAGIKDKVP-VPLTRGRFT----VTEILAWDEKENNVYFLSTQ-------GSPIVQHMYRINIADPTAT 397 (790)
Q Consensus 330 ~~~l~~~d~~~~~~~~~~~~-~~lt~~~~~----~~~~~~~s~dg~~l~~~~~~-------~~~~~~~l~~~~~~~~~~~ 397 (790)
+++++.+.+. . +.++..... ...-...+|||+ ++|.... ..+....||+++..+ ..
T Consensus 87 ---~~~~~~~~~~------~~t~~~~~~~~~~~~r~ND~~v~pdG~-~wfgt~~~~~~~~~~~~~~G~lyr~~p~g--~~ 154 (307)
T COG3386 87 ---VRLLDPDTGG------KITLLAEPEDGLPLNRPNDGVVDPDGR-IWFGDMGYFDLGKSEERPTGSLYRVDPDG--GV 154 (307)
T ss_pred ---cEEEeccCCc------eeEEeccccCCCCcCCCCceeEcCCCC-EEEeCCCccccCccccCCcceEEEEcCCC--CE
Confidence 3445544433 2 222211100 011145678886 6665433 112335799999754 34
Q ss_pred cceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463 398 PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT 445 (790)
Q Consensus 398 ~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~ 445 (790)
.+.+... -..-+.+.||||++.++++-+. ...|+.++++
T Consensus 155 ~~l~~~~-------~~~~NGla~SpDg~tly~aDT~--~~~i~r~~~d 193 (307)
T COG3386 155 VRLLDDD-------LTIPNGLAFSPDGKTLYVADTP--ANRIHRYDLD 193 (307)
T ss_pred EEeecCc-------EEecCceEECCCCCEEEEEeCC--CCeEEEEecC
Confidence 4433331 2233468999999988776433 2456666554
No 326
>KOG2394|consensus
Probab=96.22 E-value=0.034 Score=57.94 Aligned_cols=64 Identities=14% Similarity=0.126 Sum_probs=39.9
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS 316 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~ 316 (790)
...+.+.++.+||||+.++.++++. . |.+.+..+.+..-+. ..+++..--..||||||+|+ +..
T Consensus 288 ~~~g~in~f~FS~DG~~LA~VSqDG-f--LRvF~fdt~eLlg~m-----kSYFGGLLCvcWSPDGKyIv-tGG 351 (636)
T KOG2394|consen 288 IGEGSINEFAFSPDGKYLATVSQDG-F--LRIFDFDTQELLGVM-----KSYFGGLLCVCWSPDGKYIV-TGG 351 (636)
T ss_pred eccccccceeEcCCCceEEEEecCc-e--EEEeeccHHHHHHHH-----HhhccceEEEEEcCCccEEE-ecC
Confidence 3455678899999999777776653 2 444444444433222 12222233579999999887 555
No 327
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.18 E-value=0.81 Score=55.48 Aligned_cols=120 Identities=7% Similarity=0.137 Sum_probs=69.7
Q ss_pred EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCC-----C------cccccCCceeEccCCCEEEEEEccc
Q psy463 250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLD-----R------GWFEPFDHLRFSSDGKKMLLILSHN 318 (790)
Q Consensus 250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~-----~------~~~~~~~~~~~spDg~~i~~~~~~~ 318 (790)
..+++.++|..+++++... ..|.++|..++..+.+...... . ..+.......++|++..+++...
T Consensus 627 ~GIavd~~gn~LYVaDt~n--~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~-- 702 (1057)
T PLN02919 627 QGLAYNAKKNLLYVADTEN--HALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMA-- 702 (1057)
T ss_pred cEEEEeCCCCEEEEEeCCC--ceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEEC--
Confidence 5678888888666665543 2488888888776655432100 0 00111235789997776764332
Q ss_pred cccCCCCCcCcccEEEEEEcCCCCcccCCCcccccC--------C------CeEEeEEEeeecCCCEEEEEEcCCCCceE
Q psy463 319 QESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTR--------G------RFTVTEILAWDEKENNVYFLSTQGSPIVQ 384 (790)
Q Consensus 319 ~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~--------~------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 384 (790)
+ ...|++++..++. ...+.. + .......++++|||+.||+..... .
T Consensus 703 ----~------~~~I~v~d~~~g~------v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n----~ 762 (1057)
T PLN02919 703 ----G------QHQIWEYNISDGV------TRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSES----S 762 (1057)
T ss_pred ----C------CCeEEEEECCCCe------EEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCC----C
Confidence 3 3478888876654 221110 0 011112278999999888765543 4
Q ss_pred EEEEEEcCC
Q psy463 385 HMYRINIAD 393 (790)
Q Consensus 385 ~l~~~~~~~ 393 (790)
.|.++++++
T Consensus 763 ~Irv~D~~t 771 (1057)
T PLN02919 763 SIRALDLKT 771 (1057)
T ss_pred eEEEEECCC
Confidence 788888765
No 328
>KOG0650|consensus
Probab=96.15 E-value=0.22 Score=52.92 Aligned_cols=117 Identities=12% Similarity=0.214 Sum_probs=74.1
Q ss_pred CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
...+..+.|..+|.+++.+.-.+....+++..+.....+.-+... . +..-...|.|--..++ +++
T Consensus 521 ~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~ks--k---G~vq~v~FHPs~p~lf-VaT--------- 585 (733)
T KOG0650|consen 521 PKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKS--K---GLVQRVKFHPSKPYLF-VAT--------- 585 (733)
T ss_pred CCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhc--C---CceeEEEecCCCceEE-EEe---------
Confidence 344668899999997777665555556777777655443222111 1 1133678888877666 444
Q ss_pred CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC
Q psy463 326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA 392 (790)
Q Consensus 326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 392 (790)
...|.++|+..++ .++.|..+...+.. ++.+|.|..|+..+.+ ..+..++++
T Consensus 586 ----q~~vRiYdL~kqe-----lvKkL~tg~kwiS~-msihp~GDnli~gs~d-----~k~~WfDld 637 (733)
T KOG0650|consen 586 ----QRSVRIYDLSKQE-----LVKKLLTGSKWISS-MSIHPNGDNLILGSYD-----KKMCWFDLD 637 (733)
T ss_pred ----ccceEEEehhHHH-----HHHHHhcCCeeeee-eeecCCCCeEEEecCC-----CeeEEEEcc
Confidence 3467888887654 24455555555554 7889999988888777 455555554
No 329
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.08 E-value=0.011 Score=63.09 Aligned_cols=85 Identities=8% Similarity=-0.067 Sum_probs=54.9
Q ss_pred HHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhc
Q psy463 525 NLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALAL 604 (790)
Q Consensus 525 ~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~ 604 (790)
....+++.||.+ ..|.+|.+.. |+... .....+.++.+.++.+.+..+ ..+|.|+||||||.++..++..
T Consensus 113 li~~L~~~GY~~-~~dL~g~gYD---wR~~~---~~~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 113 MIEQLIKWGYKE-GKTLFGFGYD---FRQSN---RLPETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHcCCcc-CCCcccCCCC---ccccc---cHHHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 334455689865 7788886642 22210 011235666666766665333 4789999999999999998887
Q ss_pred CCC---CceEEEEEeCCC
Q psy463 605 DPS---NVFKCGISVAPV 619 (790)
Q Consensus 605 ~p~---~~~~~~v~~~~~ 619 (790)
+|. ..++..|++++.
T Consensus 183 ~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred CCHhHHhHhccEEEECCC
Confidence 774 235666666654
No 330
>KOG0771|consensus
Probab=96.05 E-value=0.089 Score=53.32 Aligned_cols=154 Identities=16% Similarity=0.117 Sum_probs=81.6
Q ss_pred CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCcee-EEEEEeCCCcccccCCceeEccCCC--EEEEEEcccccc
Q psy463 245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCD-VVFSRDLDRGWFEPFDHLRFSSDGK--KMLLILSHNQES 321 (790)
Q Consensus 245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~-~l~~~~~~~~~~~~~~~~~~spDg~--~i~~~~~~~~~~ 321 (790)
....+..+.+||||+.+++..++. +.+++.++|.+- .++..+ ..|. +...+|+-|+. .+...++ ..
T Consensus 185 ~~~eV~DL~FS~dgk~lasig~d~----~~VW~~~~g~~~a~~t~~~--k~~~--~~~cRF~~d~~~~~l~laa~---~~ 253 (398)
T KOG0771|consen 185 HHAEVKDLDFSPDGKFLASIGADS----ARVWSVNTGAALARKTPFS--KDEM--FSSCRFSVDNAQETLRLAAS---QF 253 (398)
T ss_pred hcCccccceeCCCCcEEEEecCCc----eEEEEeccCchhhhcCCcc--cchh--hhhceecccCCCceEEEEEe---cC
Confidence 345577899999999777776653 777788888442 222111 2232 56788988872 2222222 12
Q ss_pred CCCCCcCcccEEEEEEcCCC-CcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcce
Q psy463 322 DGSTPVDSWDHLTFIDLDDQ-AGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPEC 400 (790)
Q Consensus 322 ~g~~~~~~~~~l~~~d~~~~-~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 400 (790)
++. .-.++.+.+-.+ . -.+.++.+...-.+. .+..|+||+.++..+.+|. .-|| +.. +.++
T Consensus 254 ~~~-----~v~~~~~~~w~~~~---~l~~~~~~~~~~siS-sl~VS~dGkf~AlGT~dGs---Vai~--~~~----~lq~ 315 (398)
T KOG0771|consen 254 PGG-----GVRLCDISLWSGSN---FLRLRKKIKRFKSIS-SLAVSDDGKFLALGTMDGS---VAIY--DAK----SLQR 315 (398)
T ss_pred CCC-----ceeEEEeeeecccc---ccchhhhhhccCcce-eEEEcCCCcEEEEeccCCc---EEEE--Eec----eeee
Confidence 221 112222222112 1 001233333322334 3889999999988888754 3333 332 2222
Q ss_pred eeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463 401 ITCDLLTSANQKCSYSGATFSTNVSYYVLS 430 (790)
Q Consensus 401 lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~ 430 (790)
+--. . .-+...+..+.|+||.++++-.
T Consensus 316 ~~~v-k--~aH~~~VT~ltF~Pdsr~~~sv 342 (398)
T KOG0771|consen 316 LQYV-K--EAHLGFVTGLTFSPDSRYLASV 342 (398)
T ss_pred eEee-h--hhheeeeeeEEEcCCcCccccc
Confidence 2110 0 0134567789999999887553
No 331
>KOG0288|consensus
Probab=96.01 E-value=0.11 Score=52.59 Aligned_cols=109 Identities=13% Similarity=0.156 Sum_probs=70.3
Q ss_pred CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
.+.++++..|+||.-+....|+.+ +-++|+.+.+.+..+..++-.-- .-.....|||||.+++ ..+ .+|
T Consensus 341 gg~vtSl~ls~~g~~lLsssRDdt---l~viDlRt~eI~~~~sA~g~k~a-sDwtrvvfSpd~~Yva-AGS----~dg-- 409 (459)
T KOG0288|consen 341 GGRVTSLDLSMDGLELLSSSRDDT---LKVIDLRTKEIRQTFSAEGFKCA-SDWTRVVFSPDGSYVA-AGS----ADG-- 409 (459)
T ss_pred CcceeeEeeccCCeEEeeecCCCc---eeeeecccccEEEEeeccccccc-cccceeEECCCCceee-ecc----CCC--
Confidence 456889999999994433355443 88889888877766654321100 0023688999999877 555 566
Q ss_pred CcCcccEEEEEEcCCCCcccCCCcccccCCCe--EEeEEEeeecCCCEEEEEEc
Q psy463 326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF--TVTEILAWDEKENNVYFLST 377 (790)
Q Consensus 326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~--~~~~~~~~s~dg~~l~~~~~ 377 (790)
.||++++.+++ ....|....- .+. .++|+|-|+.++-...
T Consensus 410 ------sv~iW~v~tgK-----lE~~l~~s~s~~aI~-s~~W~~sG~~Llsadk 451 (459)
T KOG0288|consen 410 ------SVYIWSVFTGK-----LEKVLSLSTSNAAIT-SLSWNPSGSGLLSADK 451 (459)
T ss_pred ------cEEEEEccCce-----EEEEeccCCCCcceE-EEEEcCCCchhhcccC
Confidence 69999999887 2333332211 233 3899999987655443
No 332
>KOG2106|consensus
Probab=96.00 E-value=2.5 Score=44.36 Aligned_cols=99 Identities=13% Similarity=0.101 Sum_probs=56.3
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD 328 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~ 328 (790)
...+.+.|-|-++.-+..+ +.+++|.++.....+-.+ + ++..-.+|||||..|+ +.+ .++
T Consensus 410 ~~~~~fhpsg~va~Gt~~G----~w~V~d~e~~~lv~~~~d-~-----~~ls~v~ysp~G~~lA-vgs----~d~----- 469 (626)
T KOG2106|consen 410 AECADFHPSGVVAVGTATG----RWFVLDTETQDLVTIHTD-N-----EQLSVVRYSPDGAFLA-VGS----HDN----- 469 (626)
T ss_pred eeEeeccCcceEEEeeccc----eEEEEecccceeEEEEec-C-----CceEEEEEcCCCCEEE-Eec----CCC-----
Confidence 4567788888422222222 378888887554444433 1 2345789999999998 566 344
Q ss_pred cccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEE
Q psy463 329 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYF 374 (790)
Q Consensus 329 ~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~ 374 (790)
.--||+++..+.+ ...+..-.......+.||+|++++.-
T Consensus 470 -~iyiy~Vs~~g~~------y~r~~k~~gs~ithLDwS~Ds~~~~~ 508 (626)
T KOG2106|consen 470 -HIYIYRVSANGRK------YSRVGKCSGSPITHLDWSSDSQFLVS 508 (626)
T ss_pred -eEEEEEECCCCcE------EEEeeeecCceeEEeeecCCCceEEe
Confidence 3344555544443 33332211122234899999995443
No 333
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.99 E-value=0.02 Score=56.29 Aligned_cols=98 Identities=13% Similarity=0.030 Sum_probs=55.4
Q ss_pred EEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHH-HHHHHHHhCCCc
Q psy463 503 LLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQIN-VTRYLQENLPYI 581 (790)
Q Consensus 503 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~-~~~~l~~~~~~~ 581 (790)
.|+++|++.++.. .| .-....+....+.|+.++.+|....... ...++++++ .++.+....+
T Consensus 2 ~lf~~p~~gG~~~---~y--~~la~~l~~~~~~v~~i~~~~~~~~~~~----------~~si~~la~~y~~~I~~~~~-- 64 (229)
T PF00975_consen 2 PLFCFPPAGGSAS---SY--RPLARALPDDVIGVYGIEYPGRGDDEPP----------PDSIEELASRYAEAIRARQP-- 64 (229)
T ss_dssp EEEEESSTTCSGG---GG--HHHHHHHTTTEEEEEEECSTTSCTTSHE----------ESSHHHHHHHHHHHHHHHTS--
T ss_pred eEEEEcCCccCHH---HH--HHHHHhCCCCeEEEEEEecCCCCCCCCC----------CCCHHHHHHHHHHHhhhhCC--
Confidence 5788999887632 22 2223334322488999999886421111 022344332 2333444233
Q ss_pred CCCceEEEEechHHHHHHHHHhcCC--CCceEEEEEeCC
Q psy463 582 DKTRTAIWGWSYGGYATGLALALDP--SNVFKCGISVAP 618 (790)
Q Consensus 582 d~~ri~i~G~S~GG~~a~~~a~~~p--~~~~~~~v~~~~ 618 (790)
..++.|+|||+||.+|..+|.+=- ...+..++++.+
T Consensus 65 -~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~ 102 (229)
T PF00975_consen 65 -EGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDS 102 (229)
T ss_dssp -SSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESC
T ss_pred -CCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecC
Confidence 238999999999999988775321 223555666553
No 334
>PRK02888 nitrous-oxide reductase; Validated
Probab=95.88 E-value=0.7 Score=50.87 Aligned_cols=67 Identities=12% Similarity=0.064 Sum_probs=39.1
Q ss_pred EEccCCcEEEEEeccCcceEEEEEECCC----C-ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463 253 NWANESVVAAWVNRVQNRARITRCSINE----G-TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV 327 (790)
Q Consensus 253 ~wspDg~~~~~~~r~~~~~~i~~~~~~~----g-~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~ 327 (790)
.+.+|||..+.. ...+.++|..+ + +....... +.. .....+||||++++ ..+ ..
T Consensus 283 a~vkdGK~~~V~-----gn~V~VID~~t~~~~~~~v~~yIPV-GKs-----PHGV~vSPDGkyly-Van---kl------ 341 (635)
T PRK02888 283 EAVKAGKFKTIG-----GSKVPVVDGRKAANAGSALTRYVPV-PKN-----PHGVNTSPDGKYFI-ANG---KL------ 341 (635)
T ss_pred HhhhCCCEEEEC-----CCEEEEEECCccccCCcceEEEEEC-CCC-----ccceEECCCCCEEE-EeC---CC------
Confidence 356789854442 12488888877 2 22221111 111 34789999999887 444 12
Q ss_pred CcccEEEEEEcCCCC
Q psy463 328 DSWDHLTFIDLDDQA 342 (790)
Q Consensus 328 ~~~~~l~~~d~~~~~ 342 (790)
...+-++|++..+
T Consensus 342 --S~tVSVIDv~k~k 354 (635)
T PRK02888 342 --SPTVTVIDVRKLD 354 (635)
T ss_pred --CCcEEEEEChhhh
Confidence 2368888886543
No 335
>KOG0264|consensus
Probab=95.85 E-value=0.46 Score=48.76 Aligned_cols=158 Identities=11% Similarity=0.135 Sum_probs=87.7
Q ss_pred EEEEEccCCc-EEEEEeccCcceEEEEEECCCCce-------eEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463 250 SRVNWANESV-VAAWVNRVQNRARITRCSINEGTC-------DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES 321 (790)
Q Consensus 250 ~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~-------~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~ 321 (790)
..++|++.-. .+.....++. +.+.|+..... +.++..-. ......+|.|--+.++-.++ .
T Consensus 181 ~glsWn~~~~g~Lls~~~d~~---i~lwdi~~~~~~~~~~~p~~~~~~h~-----~~VeDV~~h~~h~~lF~sv~----d 248 (422)
T KOG0264|consen 181 YGLSWNRQQEGTLLSGSDDHT---ICLWDINAESKEDKVVDPKTIFSGHE-----DVVEDVAWHPLHEDLFGSVG----D 248 (422)
T ss_pred cccccccccceeEeeccCCCc---EEEEeccccccCCccccceEEeecCC-----cceehhhccccchhhheeec----C
Confidence 3489999887 4333333222 55555543221 22222111 23567899998888775555 3
Q ss_pred CCCCCcCcccEEEEEEcCCCCcccCCCccc-ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcce
Q psy463 322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVP-LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPEC 400 (790)
Q Consensus 322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~-lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 400 (790)
++ .|.++|+.+++ . ++.. .......+.. ++|+|=+..|+.++... ..|...++..
T Consensus 249 d~--------~L~iwD~R~~~---~-~~~~~~~ah~~~vn~-~~fnp~~~~ilAT~S~D----~tV~LwDlRn------- 304 (422)
T KOG0264|consen 249 DG--------KLMIWDTRSNT---S-KPSHSVKAHSAEVNC-VAFNPFNEFILATGSAD----KTVALWDLRN------- 304 (422)
T ss_pred CC--------eEEEEEcCCCC---C-CCcccccccCCceeE-EEeCCCCCceEEeccCC----CcEEEeechh-------
Confidence 44 68889987421 0 1322 3333444444 78999888776665532 3455555532
Q ss_pred eeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463 401 ITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT 445 (790)
Q Consensus 401 lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~ 445 (790)
|...+.++.+....+..+.|||....++.+.... ..+.++|+.
T Consensus 305 L~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D--~rl~vWDls 347 (422)
T KOG0264|consen 305 LNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTD--RRLNVWDLS 347 (422)
T ss_pred cccCceeccCCCcceEEEEeCCCCCceeEecccC--CcEEEEecc
Confidence 1111222334667888999999988876664422 345555554
No 336
>KOG0306|consensus
Probab=95.80 E-value=0.93 Score=49.80 Aligned_cols=153 Identities=8% Similarity=0.091 Sum_probs=91.8
Q ss_pred CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
..-+..+.+|.|..+++....++ |.+.+..+.+|.+-.... + .-.-.|-|.++.|+ +.. +.|
T Consensus 373 R~dVRsl~vS~d~~~~~Sga~~S----ikiWn~~t~kciRTi~~~----y---~l~~~Fvpgd~~Iv-~G~----k~G-- 434 (888)
T KOG0306|consen 373 RSDVRSLCVSSDSILLASGAGES----IKIWNRDTLKCIRTITCG----Y---ILASKFVPGDRYIV-LGT----KNG-- 434 (888)
T ss_pred hhheeEEEeecCceeeeecCCCc----EEEEEccCcceeEEeccc----c---EEEEEecCCCceEE-Eec----cCC--
Confidence 34467888998888666554443 888888888775443321 1 23567888888776 554 667
Q ss_pred CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc---CCCCCCcceee
Q psy463 326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI---ADPTATPECIT 402 (790)
Q Consensus 326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~---~~~~~~~~~lt 402 (790)
+|-++|+.+.. ....+..++. ..+.++.+||++..+-.+.+.. ..+|...+ ..+ .+.+.|+
T Consensus 435 ------el~vfdlaS~~-----l~Eti~AHdg-aIWsi~~~pD~~g~vT~saDkt---VkfWdf~l~~~~~g-t~~k~ls 498 (888)
T KOG0306|consen 435 ------ELQVFDLASAS-----LVETIRAHDG-AIWSISLSPDNKGFVTGSADKT---VKFWDFKLVVSVPG-TQKKVLS 498 (888)
T ss_pred ------ceEEEEeehhh-----hhhhhhcccc-ceeeeeecCCCCceEEecCCcE---EEEEeEEEEeccCc-ccceeee
Confidence 78888988765 1233333333 2344778899997766666533 44554332 111 1222222
Q ss_pred ec---ccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463 403 CD---LLTSANQKCSYSGATFSTNVSYYVLSCIGPG 435 (790)
Q Consensus 403 ~~---~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~ 435 (790)
-. .+. -...+..+++||||++++.+--..+
T Consensus 499 l~~~rtLe---l~ddvL~v~~Spdgk~LaVsLLdnT 531 (888)
T KOG0306|consen 499 LKHTRTLE---LEDDVLCVSVSPDGKLLAVSLLDNT 531 (888)
T ss_pred eccceEEe---ccccEEEEEEcCCCcEEEEEeccCe
Confidence 10 011 1235667899999999999866555
No 337
>KOG0643|consensus
Probab=95.76 E-value=2 Score=41.28 Aligned_cols=163 Identities=11% Similarity=0.087 Sum_probs=93.5
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEcc----CCCEEEEEEcccc
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSS----DGKKMLLILSHNQ 319 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~sp----Dg~~i~~~~~~~~ 319 (790)
..+..++.+.+..||.+++....++..+-.|..+ |+ +|-.-.+ .....|+. |.+.++ +.+
T Consensus 8 GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~n---Ge--rlGty~G-------HtGavW~~Did~~s~~li-TGS--- 71 (327)
T KOG0643|consen 8 GHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLN---GE--RLGTYDG-------HTGAVWCCDIDWDSKHLI-TGS--- 71 (327)
T ss_pred cCccccceEEecCCCcEEEEecCCCCceEEEecC---Cc--eeeeecC-------CCceEEEEEecCCcceee-ecc---
Confidence 4455667888999999888777765544333322 32 1211122 22444543 455554 444
Q ss_pred ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC--CCCceEEEEEEEcCCC--C
Q psy463 320 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ--GSPIVQHMYRINIADP--T 395 (790)
Q Consensus 320 ~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~--~~~~~~~l~~~~~~~~--~ 395 (790)
.+ ..+.++|+++|+ ....+.. ...+.. ..|+++|..+.+.... +.+....++.+..+.. .
T Consensus 72 -AD--------~t~kLWDv~tGk-----~la~~k~-~~~Vk~-~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~ 135 (327)
T KOG0643|consen 72 -AD--------QTAKLWDVETGK-----QLATWKT-NSPVKR-VDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDID 135 (327)
T ss_pred -cc--------ceeEEEEcCCCc-----EEEEeec-CCeeEE-EeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhc
Confidence 22 246788999887 1222322 223444 7899999988888776 5554455665543221 0
Q ss_pred -CC-cceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCe
Q psy463 396 -AT-PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQR 448 (790)
Q Consensus 396 -~~-~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~ 448 (790)
.+ ...|.+ ....+..+.|+|-+++|+.. .....|-.+|+.+++
T Consensus 136 s~ep~~kI~t-------~~skit~a~Wg~l~~~ii~G---he~G~is~~da~~g~ 180 (327)
T KOG0643|consen 136 SEEPYLKIPT-------PDSKITSALWGPLGETIIAG---HEDGSISIYDARTGK 180 (327)
T ss_pred ccCceEEecC-------CccceeeeeecccCCEEEEe---cCCCcEEEEEcccCc
Confidence 12 112222 34567778899999988664 334567888887653
No 338
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.62 E-value=0.99 Score=43.83 Aligned_cols=189 Identities=13% Similarity=0.150 Sum_probs=102.8
Q ss_pred EEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463 251 RVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS 329 (790)
Q Consensus 251 ~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~ 329 (790)
.++++|--+ .+++..|..+. .++.|.++.+.-.+........+ ++.-.|||||..||-+-+ +-+. .
T Consensus 72 gi~~~p~~~ravafARrPGtf--~~vfD~~~~~~pv~~~s~~~RHf---yGHGvfs~dG~~LYATEn---dfd~-----~ 138 (366)
T COG3490 72 GIAFHPALPRAVAFARRPGTF--AMVFDPNGAQEPVTLVSQEGRHF---YGHGVFSPDGRLLYATEN---DFDP-----N 138 (366)
T ss_pred CeecCCCCcceEEEEecCCce--EEEECCCCCcCcEEEecccCcee---ecccccCCCCcEEEeecC---CCCC-----C
Confidence 467788877 77777776544 67778877655444333333333 557899999998874332 2222 1
Q ss_pred ccEEEEEEcCCCCcccCCCccccc---CCCeEEeEEEeeecCCCEEEEEEcC--CC-----------CceEEEEEEEcCC
Q psy463 330 WDHLTFIDLDDQAGIKDKVPVPLT---RGRFTVTEILAWDEKENNVYFLSTQ--GS-----------PIVQHMYRINIAD 393 (790)
Q Consensus 330 ~~~l~~~d~~~~~~~~~~~~~~lt---~~~~~~~~~~~~s~dg~~l~~~~~~--~~-----------~~~~~l~~~~~~~ 393 (790)
.--|-++|...+ ...+. ..... .....|.+||+.++..... -+ .++..|..++...
T Consensus 139 rGViGvYd~r~~-------fqrvgE~~t~GiG-pHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~at 210 (366)
T COG3490 139 RGVIGVYDAREG-------FQRVGEFSTHGIG-PHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAAT 210 (366)
T ss_pred CceEEEEecccc-------cceecccccCCcC-cceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccc
Confidence 446778887633 22221 11111 1236799999988776442 11 1233455555333
Q ss_pred CCCC-cceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC----CCeEEEEecCCCeEEEeccchhHHHhhccCC
Q psy463 394 PTAT-PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG----IPEIMLFDKTGQRLLYWDTNEDLRTALTNIT 466 (790)
Q Consensus 394 ~~~~-~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~----~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~ 466 (790)
|. .+..+-. ..-..-.+.-+...+||+.+ |.|.-.+ .|-+.-....++.+..+..-++....+..|.
T Consensus 211 --G~liekh~Lp---~~l~~lSiRHld~g~dgtvw-fgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYi 282 (366)
T COG3490 211 --GNLIEKHTLP---ASLRQLSIRHLDIGRDGTVW-FGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYI 282 (366)
T ss_pred --cchhhhccCc---hhhhhcceeeeeeCCCCcEE-EEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhh
Confidence 22 1111110 00022344456778888744 5554333 4556555666677777766666666666653
No 339
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=95.61 E-value=1.4 Score=47.01 Aligned_cols=164 Identities=12% Similarity=0.096 Sum_probs=99.3
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD 328 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~ 328 (790)
-..+.++|||+.++.++.......+.++|..++........ +.. ....+++|||+.++.... .
T Consensus 118 P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~v-G~~-----P~~~a~~p~g~~vyv~~~----~------- 180 (381)
T COG3391 118 PVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPV-GNT-----PTGVAVDPDGNKVYVTNS----D------- 180 (381)
T ss_pred CceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEec-CCC-----cceEEECCCCCeEEEEec----C-------
Confidence 35688999999666665532344589999888766544222 111 247899999998884332 2
Q ss_pred cccEEEEEEcCCCCcccCCCccc------ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463 329 SWDHLTFIDLDDQAGIKDKVPVP------LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT 402 (790)
Q Consensus 329 ~~~~l~~~d~~~~~~~~~~~~~~------lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt 402 (790)
...|.++|..+.. ..+ +..+. ......+++||+.+|..-.... ...+.+++... +......
T Consensus 181 -~~~v~vi~~~~~~------v~~~~~~~~~~~~~--~P~~i~v~~~g~~~yV~~~~~~--~~~v~~id~~~--~~v~~~~ 247 (381)
T COG3391 181 -DNTVSVIDTSGNS------VVRGSVGSLVGVGT--GPAGIAVDPDGNRVYVANDGSG--SNNVLKIDTAT--GNVTATD 247 (381)
T ss_pred -CCeEEEEeCCCcc------eeccccccccccCC--CCceEEECCCCCEEEEEeccCC--CceEEEEeCCC--ceEEEec
Confidence 2378899976654 222 11111 1223678999998887765521 25788888766 3332221
Q ss_pred ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeE
Q psy463 403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRL 449 (790)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~ 449 (790)
-. .+.. .-.....+|+|++++..... ...+.++|..+..+
T Consensus 248 ~~----~~~~-~~~~v~~~p~g~~~yv~~~~--~~~V~vid~~~~~v 287 (381)
T COG3391 248 LP----VGSG-APRGVAVDPAGKAAYVANSQ--GGTVSVIDGATDRV 287 (381)
T ss_pred cc----cccC-CCCceeECCCCCEEEEEecC--CCeEEEEeCCCCce
Confidence 10 0011 33457899999988666444 45688888776443
No 340
>KOG1524|consensus
Probab=95.61 E-value=0.25 Score=51.69 Aligned_cols=144 Identities=13% Similarity=0.219 Sum_probs=79.4
Q ss_pred CCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 245 VEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 245 ~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
..+-+....|+|||. ++..-..+. |.+.. .+|-.+......+ ......+|.||...++|... +
T Consensus 103 H~~A~~~gRW~~dGtgLlt~GEDG~----iKiWS-rsGMLRStl~Q~~-----~~v~c~~W~p~S~~vl~c~g------~ 166 (737)
T KOG1524|consen 103 HAAAISSGRWSPDGAGLLTAGEDGV----IKIWS-RSGMLRSTVVQNE-----ESIRCARWAPNSNSIVFCQG------G 166 (737)
T ss_pred hhhhhhhcccCCCCceeeeecCCce----EEEEe-ccchHHHHHhhcC-----ceeEEEEECCCCCceEEecC------C
Confidence 334456778999999 554433332 44444 3444332221111 12457999999999986443 3
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC 403 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~ 403 (790)
|+++-.+..+. ++.+...++.-+.. ..|++.+..| .++... ....+| +.-+ ..|..
T Consensus 167 --------h~~IKpL~~n~-----k~i~WkAHDGiiL~-~~W~~~s~lI-~sgGED--~kfKvW--D~~G-----~~Lf~ 222 (737)
T KOG1524|consen 167 --------HISIKPLAANS-----KIIRWRAHDGLVLS-LSWSTQSNII-ASGGED--FRFKIW--DAQG-----ANLFT 222 (737)
T ss_pred --------eEEEeeccccc-----ceeEEeccCcEEEE-eecCccccce-eecCCc--eeEEee--cccC-----ccccc
Confidence 78888876553 25555555544444 7899987744 333221 113333 2222 12221
Q ss_pred cccccCCCcccEEEEEEecCCcEEEEEee
Q psy463 404 DLLTSANQKCSYSGATFSTNVSYYVLSCI 432 (790)
Q Consensus 404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~ 432 (790)
+ .-....+.+++|.||..+++-+++
T Consensus 223 S----~~~ey~ITSva~npd~~~~v~S~n 247 (737)
T KOG1524|consen 223 S----AAEEYAITSVAFNPEKDYLLWSYN 247 (737)
T ss_pred C----Chhccceeeeeeccccceeeeeee
Confidence 1 114556778889998666665543
No 341
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=95.56 E-value=0.22 Score=58.96 Aligned_cols=68 Identities=16% Similarity=0.113 Sum_probs=42.9
Q ss_pred CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463 247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS 316 (790)
Q Consensus 247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~ 316 (790)
+....++|-|.|.+++.+.|..+..+|.....++-+-....-..... ........||+|+.-|++...
T Consensus 257 gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~--~~~v~~l~Wn~ds~iLAv~~~ 324 (928)
T PF04762_consen 257 GLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPE--EEKVIELAWNSDSEILAVWLE 324 (928)
T ss_pred CccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCC--CceeeEEEECCCCCEEEEEec
Confidence 33457889999998888877666677777776653332222110000 011357999999999886543
No 342
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=95.53 E-value=0.045 Score=53.51 Aligned_cols=96 Identities=19% Similarity=0.063 Sum_probs=52.8
Q ss_pred CCccEEEEEcCCCCccccccccccchHHHHHhcCCe--EEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHH
Q psy463 499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDI--VVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQE 576 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~--~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 576 (790)
....++|++||...... + ...-..++....++ .++.+..+..+.. ..+. ....-.......+...++.+..
T Consensus 16 ~~~~vlvfVHGyn~~f~--~--a~~r~aql~~~~~~~~~~i~FsWPS~g~~-~~Y~--~d~~~a~~s~~~l~~~L~~L~~ 88 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFE--D--ALRRAAQLAHDLGFPGVVILFSWPSDGSL-LGYF--YDRESARFSGPALARFLRDLAR 88 (233)
T ss_pred CCCeEEEEEeCCCCCHH--H--HHHHHHHHHHHhCCCceEEEEEcCCCCCh-hhhh--hhhhhHHHHHHHHHHHHHHHHh
Confidence 34579999999866521 1 11122233333333 6888887754431 1111 1111111234444555555554
Q ss_pred hCCCcCCCceEEEEechHHHHHHHHHhc
Q psy463 577 NLPYIDKTRTAIWGWSYGGYATGLALAL 604 (790)
Q Consensus 577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~ 604 (790)
. ....+|.|++||||+.+.+.++..
T Consensus 89 -~--~~~~~I~ilaHSMG~rv~~~aL~~ 113 (233)
T PF05990_consen 89 -A--PGIKRIHILAHSMGNRVLLEALRQ 113 (233)
T ss_pred -c--cCCceEEEEEeCchHHHHHHHHHH
Confidence 2 235799999999999998876543
No 343
>KOG0306|consensus
Probab=95.51 E-value=5.2 Score=44.33 Aligned_cols=159 Identities=14% Similarity=0.140 Sum_probs=85.4
Q ss_pred CCCCEEEEEEEccCCc-EEEEEeccCc-ceEEEEEECCCCceeEEEEEeCCCc--ccccCCceeEccCCCEEEEEEcccc
Q psy463 244 NVEPVLSRVNWANESV-VAAWVNRVQN-RARITRCSINEGTCDVVFSRDLDRG--WFEPFDHLRFSSDGKKMLLILSHNQ 319 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~-~~~~~~r~~~-~~~i~~~~~~~g~~~~l~~~~~~~~--~~~~~~~~~~spDg~~i~~~~~~~~ 319 (790)
..++-+..++-+|||+ .+.-.....- ....-.+....|..+++.....++. ..+..-...+||||+.+++..-
T Consensus 452 AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLL--- 528 (888)
T KOG0306|consen 452 AHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLL--- 528 (888)
T ss_pred ccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEec---
Confidence 5577788999999999 5443322211 1122222223343322111100000 0011446899999999985443
Q ss_pred ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcc
Q psy463 320 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPE 399 (790)
Q Consensus 320 ~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 399 (790)
+. .-++|.+| +=+ ..-.|-.+...+.. ...|||++.++-.+.+.+ ..+|-.+...
T Consensus 529 --dn------TVkVyflD--tlK-----FflsLYGHkLPV~s-mDIS~DSklivTgSADKn---VKiWGLdFGD------ 583 (888)
T KOG0306|consen 529 --DN------TVKVYFLD--TLK-----FFLSLYGHKLPVLS-MDISPDSKLIVTGSADKN---VKIWGLDFGD------ 583 (888)
T ss_pred --cC------eEEEEEec--cee-----eeeeecccccceeE-EeccCCcCeEEeccCCCc---eEEeccccch------
Confidence 23 44677776 222 01223344455555 678999997777666644 7788777643
Q ss_pred eeeecccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463 400 CITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG 435 (790)
Q Consensus 400 ~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~ 435 (790)
|.-. + ..++..+-++.|-|+ .++.|++...+
T Consensus 584 CHKS-~---fAHdDSvm~V~F~P~-~~~FFt~gKD~ 614 (888)
T KOG0306|consen 584 CHKS-F---FAHDDSVMSVQFLPK-THLFFTCGKDG 614 (888)
T ss_pred hhhh-h---hcccCceeEEEEccc-ceeEEEecCcc
Confidence 2211 0 113445667888884 45657665443
No 344
>KOG0643|consensus
Probab=95.50 E-value=0.94 Score=43.43 Aligned_cols=135 Identities=10% Similarity=0.151 Sum_probs=76.4
Q ss_pred EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCC--cccCCCcc
Q psy463 273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQA--GIKDKVPV 350 (790)
Q Consensus 273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~--~~~~~~~~ 350 (790)
+.+.|+++|++........ +.....||++|..+++..- +.-|. ...|.++|+.... ...+.+..
T Consensus 76 ~kLWDv~tGk~la~~k~~~------~Vk~~~F~~~gn~~l~~tD---~~mg~-----~~~v~~fdi~~~~~~~~s~ep~~ 141 (327)
T KOG0643|consen 76 AKLWDVETGKQLATWKTNS------PVKRVDFSFGGNLILASTD---KQMGY-----TCFVSVFDIRDDSSDIDSEEPYL 141 (327)
T ss_pred eEEEEcCCCcEEEEeecCC------eeEEEeeccCCcEEEEEeh---hhcCc-----ceEEEEEEccCChhhhcccCceE
Confidence 7888999998776655432 2456889999998875544 34452 3456677765211 00111122
Q ss_pred cccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463 351 PLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLS 430 (790)
Q Consensus 351 ~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~ 430 (790)
.|...+-.+.. ..|+|-++.|+.--.. ..|-.+++.. ++...-+. ......+....+|+|..+++..
T Consensus 142 kI~t~~skit~-a~Wg~l~~~ii~Ghe~-----G~is~~da~~--g~~~v~s~-----~~h~~~Ind~q~s~d~T~FiT~ 208 (327)
T KOG0643|consen 142 KIPTPDSKITS-ALWGPLGETIIAGHED-----GSISIYDART--GKELVDSD-----EEHSSKINDLQFSRDRTYFITG 208 (327)
T ss_pred EecCCccceee-eeecccCCEEEEecCC-----CcEEEEEccc--Cceeeech-----hhhccccccccccCCcceEEec
Confidence 33332222333 6799999988765444 3455556554 32111110 0133467789999999987665
Q ss_pred eecC
Q psy463 431 CIGP 434 (790)
Q Consensus 431 ~~~~ 434 (790)
+...
T Consensus 209 s~Dt 212 (327)
T KOG0643|consen 209 SKDT 212 (327)
T ss_pred ccCc
Confidence 4433
No 345
>KOG2106|consensus
Probab=95.43 E-value=4.2 Score=42.78 Aligned_cols=98 Identities=12% Similarity=0.229 Sum_probs=61.7
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
.....|.|-| .++ +.. ..| +.+++|.++.. ...+-... +......++|||..++..+.+
T Consensus 410 ~~~~~fhpsg-~va-~Gt----~~G--------~w~V~d~e~~~------lv~~~~d~-~~ls~v~ysp~G~~lAvgs~d 468 (626)
T KOG2106|consen 410 AECADFHPSG-VVA-VGT----ATG--------RWFVLDTETQD------LVTIHTDN-EQLSVVRYSPDGAFLAVGSHD 468 (626)
T ss_pred eeEeeccCcc-eEE-Eee----ccc--------eEEEEecccce------eEEEEecC-CceEEEEEcCCCCEEEEecCC
Confidence 4478899999 565 444 456 67889987755 33333222 223447899999999988877
Q ss_pred CCCceEEEEEEEcCCCCCCcceee-ecccccCCCcccEEEEEEecCCcEEEE
Q psy463 379 GSPIVQHMYRINIADPTATPECIT-CDLLTSANQKCSYSGATFSTNVSYYVL 429 (790)
Q Consensus 379 ~~~~~~~l~~~~~~~~~~~~~~lt-~~~~~~~~~~~~~~~~~~s~dg~~~~~ 429 (790)
+. .-||+++.++ .+..++- |. + ..+.-..||+|+++++-
T Consensus 469 ~~---iyiy~Vs~~g--~~y~r~~k~~------g-s~ithLDwS~Ds~~~~~ 508 (626)
T KOG2106|consen 469 NH---IYIYRVSANG--RKYSRVGKCS------G-SPITHLDWSSDSQFLVS 508 (626)
T ss_pred Ce---EEEEEECCCC--cEEEEeeeec------C-ceeEEeeecCCCceEEe
Confidence 43 5566666555 3332221 11 2 34556789999998744
No 346
>KOG2182|consensus
Probab=95.39 E-value=0.086 Score=55.32 Aligned_cols=116 Identities=11% Similarity=0.115 Sum_probs=74.7
Q ss_pred CCccEEEEEcCCCCcccccccccc---chHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhcc----CCccchhHHHHHH
Q psy463 499 KKYPLLIHVYGGPSSFQVTERFSV---DWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRR----LGTVEIYDQINVT 571 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~~~~~~~---~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~----~~~~~~~D~~~~~ 571 (790)
..-|+.+++-|.+.. .+.|.. .....++++.|-.|+..+.|=-|.+ .+.......+ --.+.++|++..+
T Consensus 84 ~~gPiFLmIGGEgp~---~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S-~P~~~~st~nlk~LSs~QALaDla~fI 159 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPE---SDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQS-SPIGDLSTSNLKYLSSLQALADLAEFI 159 (514)
T ss_pred CCCceEEEEcCCCCC---CCCccccCcchHHHHHHHhCCeeEEeeeeccccC-CCCCCCcccchhhhhHHHHHHHHHHHH
Confidence 345888888663332 233422 2334556678999999999853321 1111100000 0125688999999
Q ss_pred HHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463 572 RYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV 619 (790)
Q Consensus 572 ~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~ 619 (790)
+.+..+.+.-+..+++.+|.||-|.+++++=..+|+ .+.+.++.++.
T Consensus 160 ~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe-l~~GsvASSap 206 (514)
T KOG2182|consen 160 KAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE-LTVGSVASSAP 206 (514)
T ss_pred HHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCch-hheeecccccc
Confidence 988876666666799999999999999999999997 55555555544
No 347
>KOG0264|consensus
Probab=95.38 E-value=2.2 Score=43.98 Aligned_cols=166 Identities=14% Similarity=0.155 Sum_probs=95.2
Q ss_pred CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCC--ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccc
Q psy463 244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEG--TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQE 320 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g--~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~ 320 (790)
.....+..++|.|--+ ++..+..++ .+.++|+.++ +++..... ........+|+|=+..|+.+++
T Consensus 225 ~h~~~VeDV~~h~~h~~lF~sv~dd~---~L~iwD~R~~~~~~~~~~~a-----h~~~vn~~~fnp~~~~ilAT~S---- 292 (422)
T KOG0264|consen 225 GHEDVVEDVAWHPLHEDLFGSVGDDG---KLMIWDTRSNTSKPSHSVKA-----HSAEVNCVAFNPFNEFILATGS---- 292 (422)
T ss_pred cCCcceehhhccccchhhheeecCCC---eEEEEEcCCCCCCCcccccc-----cCCceeEEEeCCCCCceEEecc----
Confidence 3455567888988777 444443332 3888888853 22211111 0012457899998887765555
Q ss_pred cCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCC------
Q psy463 321 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADP------ 394 (790)
Q Consensus 321 ~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~------ 394 (790)
.++ .|.++|+..=. .++..+......+.. +.|||....|+.++...+ ...+|.++-.+.
T Consensus 293 ~D~--------tV~LwDlRnL~----~~lh~~e~H~dev~~-V~WSPh~etvLASSg~D~--rl~vWDls~ig~eq~~ed 357 (422)
T KOG0264|consen 293 ADK--------TVALWDLRNLN----KPLHTFEGHEDEVFQ-VEWSPHNETVLASSGTDR--RLNVWDLSRIGEEQSPED 357 (422)
T ss_pred CCC--------cEEEeechhcc----cCceeccCCCcceEE-EEeCCCCCceeEecccCC--cEEEEeccccccccChhh
Confidence 455 68899986532 023445555666665 899999998877765532 145555432221
Q ss_pred --CCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEE
Q psy463 395 --TATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIM 440 (790)
Q Consensus 395 --~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~ 440 (790)
++.++.|.. =.+....+...+|.|..-+.+.+....+.-+||
T Consensus 358 a~dgppEllF~----HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW 401 (422)
T KOG0264|consen 358 AEDGPPELLFI----HGGHTAKVSDFSWNPNEPWTIASVAEDNILQIW 401 (422)
T ss_pred hccCCcceeEE----ecCcccccccccCCCCCCeEEEEecCCceEEEe
Confidence 011121111 023445667788999998888876666533333
No 348
>KOG3967|consensus
Probab=95.37 E-value=0.11 Score=47.54 Aligned_cols=100 Identities=12% Similarity=0.074 Sum_probs=59.3
Q ss_pred CCccEEEEEcCCCCcccccccccc--------------chHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhc--cCCcc
Q psy463 499 KKYPLLIHVYGGPSSFQVTERFSV--------------DWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYR--RLGTV 562 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~~~~~~~--------------~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~--~~~~~ 562 (790)
.+..++|++||.+-.. ..+|.- .+..+.. +.||-|+..+..... .|...-.. .+-..
T Consensus 99 ~~~kLlVLIHGSGvVr--AGQWARrLIIN~~Ld~GTQiPyi~rAv-~~Gygviv~N~N~~~----kfye~k~np~kyirt 171 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVR--AGQWARRLIINEDLDSGTQIPYIKRAV-AEGYGVIVLNPNRER----KFYEKKRNPQKYIRT 171 (297)
T ss_pred CccceEEEEecCceEe--cchHhhhhhhccccccCCcChHHHHHH-HcCCcEEEeCCchhh----hhhhcccCcchhccc
Confidence 3445899999976542 122221 1222233 479988888764221 12211111 11113
Q ss_pred chhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC
Q psy463 563 EIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN 608 (790)
Q Consensus 563 ~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~ 608 (790)
.++........++. + .....|+++.||+||++++.++.+.|.+
T Consensus 172 ~veh~~yvw~~~v~--p-a~~~sv~vvahsyGG~~t~~l~~~f~~d 214 (297)
T KOG3967|consen 172 PVEHAKYVWKNIVL--P-AKAESVFVVAHSYGGSLTLDLVERFPDD 214 (297)
T ss_pred hHHHHHHHHHHHhc--c-cCcceEEEEEeccCChhHHHHHHhcCCc
Confidence 45565555565553 3 5568899999999999999999998864
No 349
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=95.35 E-value=6.6 Score=46.95 Aligned_cols=114 Identities=7% Similarity=0.005 Sum_probs=60.1
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
...++|-.||+.+++..-. ...| ..+.|.+++-+ |+ ..............++|-|.|..|+-....
T Consensus 212 ~~~ISWRGDG~yFAVss~~--~~~~-----~~R~iRVy~Re-G~------L~stSE~v~gLe~~l~WrPsG~lIA~~q~~ 277 (928)
T PF04762_consen 212 RVRISWRGDGEYFAVSSVE--PETG-----SRRVIRVYSRE-GE------LQSTSEPVDGLEGALSWRPSGNLIASSQRL 277 (928)
T ss_pred ceEEEECCCCcEEEEEEEE--cCCC-----ceeEEEEECCC-ce------EEeccccCCCccCCccCCCCCCEEEEEEEc
Confidence 4467899999988854431 1122 14567777754 33 222111111223458999999977666543
Q ss_pred CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeec
Q psy463 379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIG 433 (790)
Q Consensus 379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~ 433 (790)
.+ ...|..+.-.| - +.-... +........+....|++|+..++.....
T Consensus 278 ~~--~~~VvFfErNG---L-rhgeF~-l~~~~~~~~v~~l~Wn~ds~iLAv~~~~ 325 (928)
T PF04762_consen 278 PD--RHDVVFFERNG---L-RHGEFT-LRFDPEEEKVIELAWNSDSEILAVWLED 325 (928)
T ss_pred CC--CcEEEEEecCC---c-EeeeEe-cCCCCCCceeeEEEECCCCCEEEEEecC
Confidence 22 13333333222 1 100000 0000134466789999999999987643
No 350
>KOG2565|consensus
Probab=95.34 E-value=0.1 Score=52.37 Aligned_cols=113 Identities=19% Similarity=0.149 Sum_probs=72.0
Q ss_pred CCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHHHHHh---------cCCeEEEEEcCCCCCCChh
Q psy463 479 PNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNLYLAD---------NKDIVVAYIDGRNSALKGN 549 (790)
Q Consensus 479 dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~---------~~G~~v~~~d~rG~~~~g~ 549 (790)
.|.+|+.....|+..+ ...+.+| |+++||.||+. .+-|.. . .++. +.-|-|++|..+|-|-+..
T Consensus 132 eGL~iHFlhvk~p~~k-~~k~v~P-lLl~HGwPGsv--~EFykf--I-PlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~ 204 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKK-KKKKVKP-LLLLHGWPGSV--REFYKF--I-PLLTDPKRHGNESDYAFEVIAPSLPGYGWSDA 204 (469)
T ss_pred cceeEEEEEecCCccc-cCCcccc-eEEecCCCchH--HHHHhh--h-hhhcCccccCCccceeEEEeccCCCCcccCcC
Confidence 6889999988887543 1233455 56789999983 232221 1 1221 1235599999988443221
Q ss_pred hhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC
Q psy463 550 TLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN 608 (790)
Q Consensus 550 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~ 608 (790)
+ . .. +.....++..++-|.-+++ -++..|-|.-+|..++..++..+|++
T Consensus 205 ~-----s-k~-GFn~~a~ArvmrkLMlRLg---~nkffiqGgDwGSiI~snlasLyPen 253 (469)
T KOG2565|consen 205 P-----S-KT-GFNAAATARVMRKLMLRLG---YNKFFIQGGDWGSIIGSNLASLYPEN 253 (469)
T ss_pred C-----c-cC-CccHHHHHHHHHHHHHHhC---cceeEeecCchHHHHHHHHHhhcchh
Confidence 1 1 11 1334455555665554455 48999999999999999999999974
No 351
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=95.31 E-value=0.29 Score=46.62 Aligned_cols=62 Identities=18% Similarity=0.341 Sum_probs=47.6
Q ss_pred CccEEEEecCCC------cccchhhhHHHHHHHHhcCCceEEEEcCC--CCCcCCCcchHHHHHHHHHHH
Q psy463 725 DKQYLLVHGTMD------DNVHFQQSMMLAKSLQHADIMFQSQTYPD--EEHGLIGVRPHFYHTLERFLD 786 (790)
Q Consensus 725 ~~P~Lii~G~~D------~~v~~~~~~~l~~~l~~~g~~~~~~~~p~--~~H~~~~~~~~~~~~i~~fl~ 786 (790)
.+-+|+|.|+.| -.||...+...+..+...+....-.+|+| +.|.-......+...+..||-
T Consensus 216 ~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~~v~~yv~~FLw 285 (288)
T COG4814 216 NTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENPTVAKYVKNFLW 285 (288)
T ss_pred CcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccCCChhHHHHHHHHhh
Confidence 578999999765 56888899999999988887766656665 567655567778888888874
No 352
>KOG4378|consensus
Probab=95.29 E-value=1.1 Score=46.74 Aligned_cols=157 Identities=17% Similarity=0.235 Sum_probs=96.6
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD 328 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~ 328 (790)
+.-+.+--...+++....+.+ |.+..+.++....-+..+.. .......|||--+.+..+++ .+|
T Consensus 124 vt~v~YN~~DeyiAsvs~gGd---iiih~~~t~~~tt~f~~~sg----qsvRll~ys~skr~lL~~as----d~G----- 187 (673)
T KOG4378|consen 124 VTYVDYNNTDEYIASVSDGGD---IIIHGTKTKQKTTTFTIDSG----QSVRLLRYSPSKRFLLSIAS----DKG----- 187 (673)
T ss_pred eEEEEecCCcceeEEeccCCc---EEEEecccCccccceecCCC----CeEEEeecccccceeeEeec----cCC-----
Confidence 444444434445555544332 88888888765544433211 11346789999888876666 456
Q ss_pred cccEEEEEEcCCCCcccCCCcc--cccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccc
Q psy463 329 SWDHLTFIDLDDQAGIKDKVPV--PLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLL 406 (790)
Q Consensus 329 ~~~~l~~~d~~~~~~~~~~~~~--~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~ 406 (790)
.+.++|+.+.. ++ .+..+...-.+ +.++|-...|++..... .+|+.+++.++ .-..||+-
T Consensus 188 ---~VtlwDv~g~s------p~~~~~~~HsAP~~g-icfspsne~l~vsVG~D----kki~~yD~~s~-~s~~~l~y--- 249 (673)
T KOG4378|consen 188 ---AVTLWDVQGMS------PIFHASEAHSAPCRG-ICFSPSNEALLVSVGYD----KKINIYDIRSQ-ASTDRLTY--- 249 (673)
T ss_pred ---eEEEEeccCCC------cccchhhhccCCcCc-ceecCCccceEEEeccc----ceEEEeecccc-cccceeee---
Confidence 57788887654 22 12223322334 78999887665554332 68888888652 33456664
Q ss_pred ccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463 407 TSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ 447 (790)
Q Consensus 407 ~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~ 447 (790)
...++.++|+++|.+++.. ...++|+.+|+.+.
T Consensus 250 -----~~Plstvaf~~~G~~L~aG---~s~G~~i~YD~R~~ 282 (673)
T KOG4378|consen 250 -----SHPLSTVAFSECGTYLCAG---NSKGELIAYDMRST 282 (673)
T ss_pred -----cCCcceeeecCCceEEEee---cCCceEEEEecccC
Confidence 2356779999999988663 34667999998763
No 353
>KOG2110|consensus
Probab=95.28 E-value=0.39 Score=48.08 Aligned_cols=138 Identities=12% Similarity=0.087 Sum_probs=77.4
Q ss_pred EEEEECCCCce-eEEEEEeCCCcccccCCceeEccC--CCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCc
Q psy463 273 ITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSD--GKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP 349 (790)
Q Consensus 273 i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spD--g~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~ 349 (790)
||++|+.+-+. ..|-..+ ..+.+--++||. +.+++|=.+ ...| +++++|+.+=+ ..
T Consensus 108 IyIydI~~MklLhTI~t~~-----~n~~gl~AlS~n~~n~ylAyp~s---~t~G--------dV~l~d~~nl~-----~v 166 (391)
T KOG2110|consen 108 IYIYDIKDMKLLHTIETTP-----PNPKGLCALSPNNANCYLAYPGS---TTSG--------DVVLFDTINLQ-----PV 166 (391)
T ss_pred EEEEecccceeehhhhccC-----CCccceEeeccCCCCceEEecCC---CCCc--------eEEEEEcccce-----ee
Confidence 99999876543 1121110 011233455554 457775433 2344 78999976533 12
Q ss_pred ccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEE
Q psy463 350 VPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVL 429 (790)
Q Consensus 350 ~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~ 429 (790)
..|..++..+.. +++++||..|+-.+..|. -|.++.+..+ .+......+. -...+++.+||||++++..
T Consensus 167 ~~I~aH~~~lAa-lafs~~G~llATASeKGT----VIRVf~v~~G-~kl~eFRRG~-----~~~~IySL~Fs~ds~~L~~ 235 (391)
T KOG2110|consen 167 NTINAHKGPLAA-LAFSPDGTLLATASEKGT----VIRVFSVPEG-QKLYEFRRGT-----YPVSIYSLSFSPDSQFLAA 235 (391)
T ss_pred eEEEecCCceeE-EEECCCCCEEEEeccCce----EEEEEEcCCc-cEeeeeeCCc-----eeeEEEEEEECCCCCeEEE
Confidence 334455555544 899999998877776653 3444454441 1222222211 2357789999999999877
Q ss_pred EeecCCCCeEEEEecC
Q psy463 430 SCIGPGIPEIMLFDKT 445 (790)
Q Consensus 430 ~~~~~~~~~i~~~~~~ 445 (790)
+.+..+ |.++.++
T Consensus 236 sS~TeT---VHiFKL~ 248 (391)
T KOG2110|consen 236 SSNTET---VHIFKLE 248 (391)
T ss_pred ecCCCe---EEEEEec
Confidence 765554 5555443
No 354
>KOG0282|consensus
Probab=95.27 E-value=0.098 Score=53.92 Aligned_cols=144 Identities=13% Similarity=0.122 Sum_probs=88.7
Q ss_pred CCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463 246 EPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS 324 (790)
Q Consensus 246 ~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~ 324 (790)
...+..+.||++|+ ++...-.. .|.+.|+++|++..-+.... ...-..|.||+..+++... .++
T Consensus 258 ~k~Vrd~~~s~~g~~fLS~sfD~----~lKlwDtETG~~~~~f~~~~------~~~cvkf~pd~~n~fl~G~----sd~- 322 (503)
T KOG0282|consen 258 RKPVRDASFNNCGTSFLSASFDR----FLKLWDTETGQVLSRFHLDK------VPTCVKFHPDNQNIFLVGG----SDK- 322 (503)
T ss_pred hhhhhhhhccccCCeeeeeecce----eeeeeccccceEEEEEecCC------CceeeecCCCCCcEEEEec----CCC-
Confidence 34467889999999 43333222 28899999999876665432 1446889999977775444 445
Q ss_pred CCcCcccEEEEEEcCCCCcccCCCccc-ccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463 325 TPVDSWDHLTFIDLDDQAGIKDKVPVP-LTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC 403 (790)
Q Consensus 325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~-lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~ 403 (790)
.|..+|..+++ ..+ ...+-..+.. +.|-++|++.+-++.+.. ..+|...+.. ..+.+..
T Consensus 323 -------ki~~wDiRs~k------vvqeYd~hLg~i~~-i~F~~~g~rFissSDdks---~riWe~~~~v---~ik~i~~ 382 (503)
T KOG0282|consen 323 -------KIRQWDIRSGK------VVQEYDRHLGAILD-ITFVDEGRRFISSSDDKS---VRIWENRIPV---PIKNIAD 382 (503)
T ss_pred -------cEEEEeccchH------HHHHHHhhhhheee-eEEccCCceEeeeccCcc---EEEEEcCCCc---cchhhcc
Confidence 78999998887 322 2222222233 567788987766666644 6777665432 1111111
Q ss_pred cccccCCCcccEEEEEEecCCcEEEEE
Q psy463 404 DLLTSANQKCSYSGATFSTNVSYYVLS 430 (790)
Q Consensus 404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~ 430 (790)
. +......+...|.+++++..
T Consensus 383 ~------~~hsmP~~~~~P~~~~~~aQ 403 (503)
T KOG0282|consen 383 P------EMHTMPCLTLHPNGKWFAAQ 403 (503)
T ss_pred h------hhccCcceecCCCCCeehhh
Confidence 0 23344456788999987553
No 355
>KOG4388|consensus
Probab=95.17 E-value=0.031 Score=58.97 Aligned_cols=91 Identities=15% Similarity=0.057 Sum_probs=63.1
Q ss_pred CccEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHh--
Q psy463 500 KYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQEN-- 577 (790)
Q Consensus 500 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-- 577 (790)
..-+|++.|||+.......+-. .+...++.+.|+-|+.+||.-.+.-..+ ...+++..+.-|++.+
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE-~YLr~Wa~aL~cPiiSVdYSLAPEaPFP-----------RaleEv~fAYcW~inn~a 462 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHE-PYLRSWAQALGCPIISVDYSLAPEAPFP-----------RALEEVFFAYCWAINNCA 462 (880)
T ss_pred CceEEEEecCCceeeecccccc-HHHHHHHHHhCCCeEEeeeccCCCCCCC-----------cHHHHHHHHHHHHhcCHH
Confidence 3458999999987543222222 3445555568999999999876653322 3477888888888764
Q ss_pred -CCCcCCCceEEEEechHHHHHHHHHh
Q psy463 578 -LPYIDKTRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 578 -~~~~d~~ri~i~G~S~GG~~a~~~a~ 603 (790)
++ ...+||++.|-|.||.++.-.+.
T Consensus 463 llG-~TgEriv~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 463 LLG-STGERIVLAGDSAGGNLCFTVAL 488 (880)
T ss_pred HhC-cccceEEEeccCCCcceeehhHH
Confidence 34 44689999999999998765443
No 356
>KOG0639|consensus
Probab=95.05 E-value=0.21 Score=51.83 Aligned_cols=138 Identities=12% Similarity=0.098 Sum_probs=85.7
Q ss_pred EEEEEEccCCcEEEE-EeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463 249 LSRVNWANESVVAAW-VNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV 327 (790)
Q Consensus 249 ~~~~~wspDg~~~~~-~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~ 327 (790)
-..++.|||.|+.+. ...+. |.++|+-.....+-+.. ..+....+..|+||.+|. +.. .+
T Consensus 512 CyALa~spDakvcFsccsdGn----I~vwDLhnq~~VrqfqG-----htDGascIdis~dGtklW-TGG----lD----- 572 (705)
T KOG0639|consen 512 CYALAISPDAKVCFSCCSDGN----IAVWDLHNQTLVRQFQG-----HTDGASCIDISKDGTKLW-TGG----LD----- 572 (705)
T ss_pred hhhhhcCCccceeeeeccCCc----EEEEEcccceeeecccC-----CCCCceeEEecCCCceee-cCC----Cc-----
Confidence 346788999995443 33333 88899877655444432 112256789999999997 443 12
Q ss_pred CcccEEEEEEcCCCCcccCCCcccccCCCeEE-eEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeeccc
Q psy463 328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV-TEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLL 406 (790)
Q Consensus 328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~ 406 (790)
..+.-+|+..+. ++...++.. ...+...|.+.+|++--.. .++++....+ .+.-.|..
T Consensus 573 ---ntvRcWDlregr--------qlqqhdF~SQIfSLg~cP~~dWlavGMen-----s~vevlh~sk--p~kyqlhl--- 631 (705)
T KOG0639|consen 573 ---NTVRCWDLREGR--------QLQQHDFSSQIFSLGYCPTGDWLAVGMEN-----SNVEVLHTSK--PEKYQLHL--- 631 (705)
T ss_pred ---cceeehhhhhhh--------hhhhhhhhhhheecccCCCccceeeeccc-----CcEEEEecCC--ccceeecc---
Confidence 246677876654 444443321 1226788999998876544 4666666654 23334443
Q ss_pred ccCCCcccEEEEEEecCCcEEEEE
Q psy463 407 TSANQKCSYSGATFSTNVSYYVLS 430 (790)
Q Consensus 407 ~~~~~~~~~~~~~~s~dg~~~~~~ 430 (790)
...-+-++.|++.|+|++-+
T Consensus 632 ----heScVLSlKFa~cGkwfvSt 651 (705)
T KOG0639|consen 632 ----HESCVLSLKFAYCGKWFVST 651 (705)
T ss_pred ----cccEEEEEEecccCceeeec
Confidence 34456678999999997554
No 357
>KOG0319|consensus
Probab=95.04 E-value=4.7 Score=44.50 Aligned_cols=329 Identities=14% Similarity=0.126 Sum_probs=156.4
Q ss_pred eeecCCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCC--cceeEeeeecccce
Q psy463 5 EVLSSSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWAN--ESVVAAWVNRVQNR 82 (790)
Q Consensus 5 ~~~~~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~--~~~~~~~~~r~~~~ 82 (790)
..++...++.+|+||..+..++. +.-..+|.+...- ....+.+ |...-.+...+ .+..-.|.-.....
T Consensus 190 ~H~S~vtsL~~~~d~~~~ls~~R-Dkvi~vwd~~~~~--------~l~~lp~-ye~~E~vv~l~~~~~~~~~~~~TaG~~ 259 (775)
T KOG0319|consen 190 LHKSAVTSLAFSEDSLELLSVGR-DKVIIVWDLVQYK--------KLKTLPL-YESLESVVRLREELGGKGEYIITAGGS 259 (775)
T ss_pred hhhhheeeeeeccCCceEEEecc-CcEEEEeehhhhh--------hhheech-hhheeeEEEechhcCCcceEEEEecCC
Confidence 34677789999999999887764 4445555441100 0000000 00110111110 11111222222333
Q ss_pred eEEEEeeCCCCeeeEEEeecCCCCccccCCcc-ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcc
Q psy463 83 ARITRCSINEGTCDVVFSRDLDRGWFEPFDHL-RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP 161 (790)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~ 161 (790)
-.++.++..+++|.......... ..... ...-+++-++.+. -++|.++|.++.. +.
T Consensus 260 g~~~~~d~es~~~~~~~~~~~~~----e~~~~~~~~~~~~~l~vta--------------eQnl~l~d~~~l~-----i~ 316 (775)
T KOG0319|consen 260 GVVQYWDSESGKCVYKQRQSDSE----EIDHLLAIESMSQLLLVTA--------------EQNLFLYDEDELT-----IV 316 (775)
T ss_pred ceEEEEecccchhhhhhccCCch----hhhcceeccccCceEEEEc--------------cceEEEEEccccE-----Ee
Confidence 45566777777766543332111 11111 2223334344333 3488899877763 45
Q ss_pred eeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccC
Q psy463 162 VPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEK 241 (790)
Q Consensus 162 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~ 241 (790)
.+|-...-++....-+.+..+ .+++..+. .+|-++++.+...+ |-.
T Consensus 317 k~ivG~ndEI~Dm~~lG~e~~--~laVATNs-----------~~lr~y~~~~~~c~-------ii~-------------- 362 (775)
T KOG0319|consen 317 KQIVGYNDEILDMKFLGPEES--HLAVATNS-----------PELRLYTLPTSYCQ-------IIP-------------- 362 (775)
T ss_pred hhhcCCchhheeeeecCCccc--eEEEEeCC-----------CceEEEecCCCceE-------EEe--------------
Confidence 566655556666666666555 33333321 34555566664421 221
Q ss_pred CCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463 242 ENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES 321 (790)
Q Consensus 242 ~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~ 321 (790)
+....+.++.-+-+|-+++..+++ +..++|++ +.+.++.+..... ++.-...+....|-.|-.++.+++ .
T Consensus 363 --GH~e~vlSL~~~~~g~llat~sKD-~svilWr~--~~~~~~~~~~a~~-~gH~~svgava~~~~~asffvsvS----~ 432 (775)
T KOG0319|consen 363 --GHTEAVLSLDVWSSGDLLATGSKD-KSVILWRL--NNNCSKSLCVAQA-NGHTNSVGAVAGSKLGASFFVSVS----Q 432 (775)
T ss_pred --CchhheeeeeecccCcEEEEecCC-ceEEEEEe--cCCcchhhhhhhh-cccccccceeeecccCccEEEEec----C
Confidence 233334444433455444444443 33456666 3232222111111 111112446677777777776666 4
Q ss_pred CCCCCcCcccEEEEEEcCCCCcccCCCccccc------CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCC
Q psy463 322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLT------RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPT 395 (790)
Q Consensus 322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~ 395 (790)
+. .|-++++...+... .+..++ .++-++.. ++.+|+.+.|+-.+.+.. ..||.++ .
T Consensus 433 D~--------tlK~W~l~~s~~~~--~~~~~~~~~t~~aHdKdIN~-Vaia~ndkLiAT~SqDkt---aKiW~le-~--- 494 (775)
T KOG0319|consen 433 DC--------TLKLWDLPKSKETA--FPIVLTCRYTERAHDKDINC-VAIAPNDKLIATGSQDKT---AKIWDLE-Q--- 494 (775)
T ss_pred Cc--------eEEEecCCCccccc--ccceehhhHHHHhhcccccc-eEecCCCceEEecccccc---eeeeccc-C---
Confidence 44 35555554422100 022221 12334444 788998886655555543 6777665 1
Q ss_pred CCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463 396 ATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG 435 (790)
Q Consensus 396 ~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~ 435 (790)
.+..-+ +.++..++..++||+..+.+ .++++..
T Consensus 495 ~~l~~v------LsGH~RGvw~V~Fs~~dq~l-aT~SgD~ 527 (775)
T KOG0319|consen 495 LRLLGV------LSGHTRGVWCVSFSKNDQLL-ATCSGDK 527 (775)
T ss_pred ceEEEE------eeCCccceEEEEecccccee-EeccCCc
Confidence 111111 22367788899999988755 4555544
No 358
>KOG0295|consensus
Probab=94.97 E-value=1.3 Score=44.42 Aligned_cols=135 Identities=10% Similarity=0.150 Sum_probs=80.3
Q ss_pred ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463 204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC 283 (790)
Q Consensus 204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~ 283 (790)
..|...++++|-.. .+++ .....+..+....||.+++.-+.++ .+.+..+++++|
T Consensus 215 ~tik~We~~tg~cv-----~t~~-----------------~h~ewvr~v~v~~DGti~As~s~dq---tl~vW~~~t~~~ 269 (406)
T KOG0295|consen 215 NTIKAWECDTGYCV-----KTFP-----------------GHSEWVRMVRVNQDGTIIASCSNDQ---TLRVWVVATKQC 269 (406)
T ss_pred cceeEEecccceeE-----Eecc-----------------CchHhEEEEEecCCeeEEEecCCCc---eEEEEEeccchh
Confidence 46666777777642 3333 4455788899999999777665544 266666778877
Q ss_pred eEEEEEeCCCcccccCCceeEcc--------------CCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCc
Q psy463 284 DVVFSRDLDRGWFEPFDHLRFSS--------------DGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVP 349 (790)
Q Consensus 284 ~~l~~~~~~~~~~~~~~~~~~sp--------------Dg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~ 349 (790)
+.++.+-.. +..-.+|.| ||-.+.+..+ +++ .|-.+|+.++. ..
T Consensus 270 k~~lR~hEh-----~vEci~wap~~~~~~i~~at~~~~~~~~l~s~S----rDk--------tIk~wdv~tg~-----cL 327 (406)
T KOG0295|consen 270 KAELREHEH-----PVECIAWAPESSYPSISEATGSTNGGQVLGSGS----RDK--------TIKIWDVSTGM-----CL 327 (406)
T ss_pred hhhhhcccc-----ceEEEEecccccCcchhhccCCCCCccEEEeec----ccc--------eEEEEeccCCe-----EE
Confidence 655432110 111223322 3333443444 444 57778888775 23
Q ss_pred ccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEE
Q psy463 350 VPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRI 389 (790)
Q Consensus 350 ~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 389 (790)
-.|...+-.+.+ .+++|.|++|+-.+.++. -++|.+
T Consensus 328 ~tL~ghdnwVr~-~af~p~Gkyi~ScaDDkt---lrvwdl 363 (406)
T KOG0295|consen 328 FTLVGHDNWVRG-VAFSPGGKYILSCADDKT---LRVWDL 363 (406)
T ss_pred EEEecccceeee-eEEcCCCeEEEEEecCCc---EEEEEe
Confidence 334444444565 789999999888887744 556655
No 359
>KOG1920|consensus
Probab=94.89 E-value=11 Score=44.54 Aligned_cols=125 Identities=10% Similarity=0.088 Sum_probs=66.5
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEc
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLST 377 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~ 377 (790)
...+.|--||+.+++..-. ...| ...|-++|-+ |. . +.+.. .......++|-|.|..++....
T Consensus 198 ~~~IsWRgDg~~fAVs~~~--~~~~------~RkirV~drE-g~------L-ns~se~~~~l~~~LsWkPsgs~iA~iq~ 261 (1265)
T KOG1920|consen 198 KTSISWRGDGEYFAVSFVE--SETG------TRKIRVYDRE-GA------L-NSTSEPVEGLQHSLSWKPSGSLIAAIQC 261 (1265)
T ss_pred CceEEEccCCcEEEEEEEe--ccCC------ceeEEEeccc-ch------h-hcccCcccccccceeecCCCCeEeeeee
Confidence 3458999999988754321 1233 4678888866 32 1 11111 1122345899998887765544
Q ss_pred CCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463 378 QGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG 446 (790)
Q Consensus 378 ~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~ 446 (790)
..+- ..|..+.-.| -..- . ..+..+.+...+..+.|+.++..++..........|.++...+
T Consensus 262 ~~sd--~~IvffErNG---L~hg-~-f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~N 323 (1265)
T KOG1920|consen 262 KTSD--SDIVFFERNG---LRHG-E-FVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGN 323 (1265)
T ss_pred cCCC--CcEEEEecCC---cccc-c-cccCCcccccchheeeecCCCCceeeeecccccceEEEEEecC
Confidence 4221 2344443322 1100 0 0000111233367789999999887765554445566666554
No 360
>KOG0278|consensus
Probab=94.87 E-value=2.5 Score=40.16 Aligned_cols=141 Identities=14% Similarity=0.185 Sum_probs=82.3
Q ss_pred CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463 244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD 322 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~ 322 (790)
...+.+..+.|--..+ ++..+... .+.+.|..+|...+-..-.. +..+...|+||+.|. ++ .
T Consensus 141 ghtg~Ir~v~wc~eD~~iLSSadd~----tVRLWD~rTgt~v~sL~~~s------~VtSlEvs~dG~ilT-ia------~ 203 (334)
T KOG0278|consen 141 GHTGGIRTVLWCHEDKCILSSADDK----TVRLWDHRTGTEVQSLEFNS------PVTSLEVSQDGRILT-IA------Y 203 (334)
T ss_pred CCCCcceeEEEeccCceEEeeccCC----ceEEEEeccCcEEEEEecCC------CCcceeeccCCCEEE-Ee------c
Confidence 6677888899988777 54443322 27788888886654333221 256889999999665 22 2
Q ss_pred CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463 323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT 402 (790)
Q Consensus 323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt 402 (790)
| .-|..+|+.+=+ ..+.. +-...+.. .+.+|+.. +++.+.. . ..+|+++..+ ++..-..
T Consensus 204 g-------ssV~Fwdaksf~-----~lKs~-k~P~nV~S-ASL~P~k~-~fVaGge-d---~~~~kfDy~T--geEi~~~ 262 (334)
T KOG0278|consen 204 G-------SSVKFWDAKSFG-----LLKSY-KMPCNVES-ASLHPKKE-FFVAGGE-D---FKVYKFDYNT--GEEIGSY 262 (334)
T ss_pred C-------ceeEEecccccc-----ceeec-cCcccccc-ccccCCCc-eEEecCc-c---eEEEEEeccC--Cceeeec
Confidence 3 136667765422 01111 11223333 56788864 4444333 2 6888888877 4332221
Q ss_pred ecccccCCCcccEEEEEEecCCcEE
Q psy463 403 CDLLTSANQKCSYSGATFSTNVSYY 427 (790)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~s~dg~~~ 427 (790)
. .+.-+.+..+.|||||...
T Consensus 263 n-----kgh~gpVhcVrFSPdGE~y 282 (334)
T KOG0278|consen 263 N-----KGHFGPVHCVRFSPDGELY 282 (334)
T ss_pred c-----cCCCCceEEEEECCCCcee
Confidence 1 1145677889999999854
No 361
>KOG1009|consensus
Probab=94.85 E-value=0.27 Score=49.73 Aligned_cols=113 Identities=16% Similarity=0.089 Sum_probs=62.3
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEE------CCC-----CceeEEEEEeCCCcccccCCceeEccCCCEEE
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCS------INE-----GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKML 312 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~------~~~-----g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~ 312 (790)
.....+.-+.|+|+|.+++....+. ..-|+... .++ .+...+...- .+-..-..+..|+||+..++
T Consensus 63 ~H~~aVN~vRf~p~gelLASg~D~g-~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~l--r~h~~diydL~Ws~d~~~l~ 139 (434)
T KOG1009|consen 63 RHTRAVNVVRFSPDGELLASGGDGG-EVFLWKQGDVRIFDADTEADLNKEKWVVKKVL--RGHRDDIYDLAWSPDSNFLV 139 (434)
T ss_pred CCcceeEEEEEcCCcCeeeecCCCc-eEEEEEecCcCCccccchhhhCccceEEEEEe--cccccchhhhhccCCCceee
Confidence 4556677889999999776654332 11122222 122 1111111110 00001134789999999777
Q ss_pred EEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 313 LILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 313 ~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
+.+ . -.-++++|+..|. ....+..+...+.+ .+|+|-+++|.-.+.+
T Consensus 140 -s~s------~------dns~~l~Dv~~G~-----l~~~~~dh~~yvqg-vawDpl~qyv~s~s~d 186 (434)
T KOG1009|consen 140 -SGS------V------DNSVRLWDVHAGQ-----LLAILDDHEHYVQG-VAWDPLNQYVASKSSD 186 (434)
T ss_pred -eee------c------cceEEEEEeccce-----eEeeccccccccce-eecchhhhhhhhhccC
Confidence 343 1 2357888988776 23344444444444 8899988877666555
No 362
>KOG2048|consensus
Probab=94.75 E-value=2.6 Score=45.89 Aligned_cols=117 Identities=15% Similarity=0.192 Sum_probs=70.7
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD 328 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~ 328 (790)
.....++-|+..++... -+...+...++++..-+.+...... .-........-||||.+|+....
T Consensus 431 a~~i~ftid~~k~~~~s--~~~~~le~~el~~ps~kel~~~~~~-~~~~~I~~l~~SsdG~yiaa~~t------------ 495 (691)
T KOG2048|consen 431 ASAISFTIDKNKLFLVS--KNIFSLEEFELETPSFKELKSIQSQ-AKCPSISRLVVSSDGNYIAAIST------------ 495 (691)
T ss_pred ceeeEEEecCceEEEEe--cccceeEEEEecCcchhhhhccccc-cCCCcceeEEEcCCCCEEEEEec------------
Confidence 45677888888554444 2333477777777654444332211 11122456888999999985433
Q ss_pred cccEEEEEEcCCCCcccCCCccccc-CCCeEEeEEEeeec-CCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463 329 SWDHLTFIDLDDQAGIKDKVPVPLT-RGRFTVTEILAWDE-KENNVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 329 ~~~~l~~~d~~~~~~~~~~~~~~lt-~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
...|+++++++++ .+.|. .-...++. .+++| +-+.|+..... .++|.+++..
T Consensus 496 -~g~I~v~nl~~~~------~~~l~~rln~~vTa-~~~~~~~~~~lvvats~-----nQv~efdi~~ 549 (691)
T KOG2048|consen 496 -RGQIFVYNLETLE------SHLLKVRLNIDVTA-AAFSPFVRNRLVVATSN-----NQVFEFDIEA 549 (691)
T ss_pred -cceEEEEEcccce------eecchhccCcceee-eeccccccCcEEEEecC-----CeEEEEecch
Confidence 3479999999886 55544 22233333 55663 44566666555 6889888854
No 363
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=94.71 E-value=3.9 Score=43.59 Aligned_cols=203 Identities=14% Similarity=0.105 Sum_probs=110.6
Q ss_pred ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463 115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES 194 (790)
Q Consensus 115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (790)
..+++|++++-..... ..+.+++..... ....+..|. .-.-.+++++++ -+|+.....
T Consensus 80 ~v~~~~~~vyv~~~~~------------~~v~vid~~~~~-----~~~~~~vG~--~P~~~~~~~~~~--~vYV~n~~~- 137 (381)
T COG3391 80 AVNPAGNKVYVTTGDS------------NTVSVIDTATNT-----VLGSIPVGL--GPVGLAVDPDGK--YVYVANAGN- 137 (381)
T ss_pred eeCCCCCeEEEecCCC------------CeEEEEcCcccc-----eeeEeeecc--CCceEEECCCCC--EEEEEeccc-
Confidence 6688888777654332 278888855442 222222232 222346666666 455555421
Q ss_pred CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEE
Q psy463 195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARIT 274 (790)
Q Consensus 195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~ 274 (790)
....++++|..++..... +. .+. .-.....+|||+.++..+. ....|.
T Consensus 138 -------~~~~vsvid~~t~~~~~~-----~~-----------------vG~-~P~~~a~~p~g~~vyv~~~--~~~~v~ 185 (381)
T COG3391 138 -------GNNTVSVIDAATNKVTAT-----IP-----------------VGN-TPTGVAVDPDGNKVYVTNS--DDNTVS 185 (381)
T ss_pred -------CCceEEEEeCCCCeEEEE-----Ee-----------------cCC-CcceEEECCCCCeEEEEec--CCCeEE
Confidence 125778888776542111 11 111 1157889999996666652 233488
Q ss_pred EEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc--c
Q psy463 275 RCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP--L 352 (790)
Q Consensus 275 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~--l 352 (790)
.++.++..... -.....-.-........++|||++++.... .+. ...+..+|..++. ... +
T Consensus 186 vi~~~~~~v~~-~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~----~~~------~~~v~~id~~~~~------v~~~~~ 248 (381)
T COG3391 186 VIDTSGNSVVR-GSVGSLVGVGTGPAGIAVDPDGNRVYVAND----GSG------SNNVLKIDTATGN------VTATDL 248 (381)
T ss_pred EEeCCCcceec-cccccccccCCCCceEEECCCCCEEEEEec----cCC------CceEEEEeCCCce------EEEecc
Confidence 88866654443 110000000011246889999998874332 221 1378888887765 322 2
Q ss_pred cCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463 353 TRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 353 t~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
..+.. .......+|+|+.+|...... ..++.++...
T Consensus 249 ~~~~~-~~~~v~~~p~g~~~yv~~~~~----~~V~vid~~~ 284 (381)
T COG3391 249 PVGSG-APRGVAVDPAGKAAYVANSQG----GTVSVIDGAT 284 (381)
T ss_pred ccccC-CCCceeECCCCCEEEEEecCC----CeEEEEeCCC
Confidence 22222 112256789999887775552 4677777654
No 364
>KOG1524|consensus
Probab=94.60 E-value=1.1 Score=47.27 Aligned_cols=93 Identities=15% Similarity=0.193 Sum_probs=55.3
Q ss_pred CceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc-ccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP-LTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 300 ~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~-lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
...+|||||..|+ ++. .+| .|-++. .+|- .+. |......+.. .+|.|++..++|....
T Consensus 108 ~~gRW~~dGtgLl-t~G----EDG--------~iKiWS-rsGM------LRStl~Q~~~~v~c-~~W~p~S~~vl~c~g~ 166 (737)
T KOG1524|consen 108 SSGRWSPDGAGLL-TAG----EDG--------VIKIWS-RSGM------LRSTVVQNEESIRC-ARWAPNSNSIVFCQGG 166 (737)
T ss_pred hhcccCCCCceee-eec----CCc--------eEEEEe-ccch------HHHHHhhcCceeEE-EEECCCCCceEEecCC
Confidence 4678999999987 555 678 344444 3342 332 3344444554 8999999999998654
Q ss_pred CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEE
Q psy463 379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYY 427 (790)
Q Consensus 379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~ 427 (790)
|++.-++..+ .++-+... ..+.+-..+|++....|
T Consensus 167 ------h~~IKpL~~n-~k~i~WkA-------HDGiiL~~~W~~~s~lI 201 (737)
T KOG1524|consen 167 ------HISIKPLAAN-SKIIRWRA-------HDGLVLSLSWSTQSNII 201 (737)
T ss_pred ------eEEEeecccc-cceeEEec-------cCcEEEEeecCccccce
Confidence 7777776542 22222221 33445556666665544
No 365
>KOG0310|consensus
Probab=94.59 E-value=5.3 Score=41.80 Aligned_cols=148 Identities=9% Similarity=0.038 Sum_probs=84.6
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
....|+...+|+|-..-+.++..-++. |-++|....... +.+-.. + .+.....+-|.|..|+ +++ |
T Consensus 151 ~htDYVR~g~~~~~~~hivvtGsYDg~--vrl~DtR~~~~~-v~elnh-g---~pVe~vl~lpsgs~ia-sAg------G 216 (487)
T KOG0310|consen 151 GHTDYVRCGDISPANDHIVVTGSYDGK--VRLWDTRSLTSR-VVELNH-G---CPVESVLALPSGSLIA-SAG------G 216 (487)
T ss_pred CCcceeEeeccccCCCeEEEecCCCce--EEEEEeccCCce-eEEecC-C---CceeeEEEcCCCCEEE-EcC------C
Confidence 677899999999988833333322222 555555544222 222111 0 2356788999999887 444 5
Q ss_pred CCCcCcccEEEEEEcCCC-CcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463 324 STPVDSWDHLTFIDLDDQ-AGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT 402 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~-~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt 402 (790)
..+-+||+.+| + .+.....+.-.++. +...-|+.+|+-.+-+++ .++|. +.. -+ +.
T Consensus 217 -------n~vkVWDl~~G~q-----ll~~~~~H~KtVTc-L~l~s~~~rLlS~sLD~~---VKVfd--~t~--~K---vv 273 (487)
T KOG0310|consen 217 -------NSVKVWDLTTGGQ-----LLTSMFNHNKTVTC-LRLASDSTRLLSGSLDRH---VKVFD--TTN--YK---VV 273 (487)
T ss_pred -------CeEEEEEecCCce-----ehhhhhcccceEEE-EEeecCCceEeecccccc---eEEEE--ccc--eE---EE
Confidence 36889999744 3 12222223335555 677778888877766643 44444 322 11 11
Q ss_pred ecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463 403 CDLLTSANQKCSYSGATFSTNVSYYVLSCI 432 (790)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~ 432 (790)
... .-.+.+-+.++|||++.++...+
T Consensus 274 ~s~----~~~~pvLsiavs~dd~t~viGms 299 (487)
T KOG0310|consen 274 HSW----KYPGPVLSIAVSPDDQTVVIGMS 299 (487)
T ss_pred Eee----ecccceeeEEecCCCceEEEecc
Confidence 110 01235567889999998877543
No 366
>KOG1007|consensus
Probab=94.58 E-value=1.4 Score=42.82 Aligned_cols=151 Identities=16% Similarity=0.166 Sum_probs=86.8
Q ss_pred CEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce-e-EEEEEeCCCcccccCCceeEcc--CCCEEEEEEccccccC
Q psy463 247 PVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC-D-VVFSRDLDRGWFEPFDHLRFSS--DGKKMLLILSHNQESD 322 (790)
Q Consensus 247 ~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~-~-~l~~~~~~~~~~~~~~~~~~sp--Dg~~i~~~~~~~~~~~ 322 (790)
+.+.-+.|-||++.++.+.+.. |.+++++.+.. . .+..... .+-...+.+-+||| ||..++ +.+ +
T Consensus 124 g~i~cvew~Pns~klasm~dn~----i~l~~l~ess~~vaev~ss~s-~e~~~~ftsg~WspHHdgnqv~-tt~-----d 192 (370)
T KOG1007|consen 124 GKINCVEWEPNSDKLASMDDNN----IVLWSLDESSKIVAEVLSSES-AEMRHSFTSGAWSPHHDGNQVA-TTS-----D 192 (370)
T ss_pred CceeeEEEcCCCCeeEEeccCc----eEEEEcccCcchheeeccccc-ccccceecccccCCCCccceEE-EeC-----C
Confidence 4677899999999666665443 88888876644 2 2222111 11111245789999 899888 444 2
Q ss_pred CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCe-EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463 323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF-TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI 401 (790)
Q Consensus 323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 401 (790)
+ .|..+|+.+-+ +.-.|...-. .+.. +.++|+...++.+..+. +..+||-..-.+ ..++.
T Consensus 193 ~--------tl~~~D~RT~~-----~~~sI~dAHgq~vrd-lDfNpnkq~~lvt~gDd--gyvriWD~R~tk--~pv~e- 253 (370)
T KOG1007|consen 193 S--------TLQFWDLRTMK-----KNNSIEDAHGQRVRD-LDFNPNKQHILVTCGDD--GYVRIWDTRKTK--FPVQE- 253 (370)
T ss_pred C--------cEEEEEccchh-----hhcchhhhhcceeee-ccCCCCceEEEEEcCCC--ccEEEEeccCCC--ccccc-
Confidence 3 58888987643 1223332222 2333 78899887777666552 225666432211 11222
Q ss_pred eecccccCCCcccEEEEEEecCCcEEEEEeec
Q psy463 402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIG 433 (790)
Q Consensus 402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~ 433 (790)
+++....+..+.|.|--..++.+...
T Consensus 254 ------l~~HsHWvW~VRfn~~hdqLiLs~~S 279 (370)
T KOG1007|consen 254 ------LPGHSHWVWAVRFNPEHDQLILSGGS 279 (370)
T ss_pred ------cCCCceEEEEEEecCccceEEEecCC
Confidence 23355667778888887777666433
No 367
>KOG0640|consensus
Probab=94.57 E-value=1.7 Score=42.60 Aligned_cols=118 Identities=12% Similarity=0.178 Sum_probs=68.7
Q ss_pred CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
...+..+++.|.|.++..-. +++.+.++|+++-+|-.-... . ..-.+......+|+.|+ ||++.+ .+|
T Consensus 216 ~~~vrsiSfHPsGefllvgT---dHp~~rlYdv~T~QcfvsanP-d-~qht~ai~~V~Ys~t~~-lYvTaS----kDG-- 283 (430)
T KOG0640|consen 216 TEPVRSISFHPSGEFLLVGT---DHPTLRLYDVNTYQCFVSANP-D-DQHTGAITQVRYSSTGS-LYVTAS----KDG-- 283 (430)
T ss_pred cceeeeEeecCCCceEEEec---CCCceeEEeccceeEeeecCc-c-cccccceeEEEecCCcc-EEEEec----cCC--
Confidence 34567899999999544322 234477788888776432221 1 11112244788999998 555777 788
Q ss_pred CcCcccEEEEEEcCCCCcccCCCccccc--CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEE
Q psy463 326 PVDSWDHLTFIDLDDQAGIKDKVPVPLT--RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRIN 390 (790)
Q Consensus 326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt--~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 390 (790)
+|-++|--++. ..+.+. .+.-++-+ ..|..+||+|.-.+.+.. ..||.+.
T Consensus 284 ------~IklwDGVS~r-----Cv~t~~~AH~gsevcS-a~Ftkn~kyiLsSG~DS~---vkLWEi~ 335 (430)
T KOG0640|consen 284 ------AIKLWDGVSNR-----CVRTIGNAHGGSEVCS-AVFTKNGKYILSSGKDST---VKLWEIS 335 (430)
T ss_pred ------cEEeeccccHH-----HHHHHHhhcCCceeee-EEEccCCeEEeecCCcce---eeeeeec
Confidence 67788743333 233332 23334444 678899986655443322 4555553
No 368
>KOG1539|consensus
Probab=94.41 E-value=0.25 Score=54.64 Aligned_cols=63 Identities=14% Similarity=0.142 Sum_probs=46.0
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS 316 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~ 316 (790)
+....+...++|||||++....-++. |.++|+.++.+......+. +..+.+|||+|..|+ ++.
T Consensus 574 gh~nritd~~FS~DgrWlisasmD~t---Ir~wDlpt~~lID~~~vd~------~~~sls~SPngD~LA-T~H 636 (910)
T KOG1539|consen 574 GHGNRITDMTFSPDGRWLISASMDST---IRTWDLPTGTLIDGLLVDS------PCTSLSFSPNGDFLA-TVH 636 (910)
T ss_pred ccccceeeeEeCCCCcEEEEeecCCc---EEEEeccCcceeeeEecCC------cceeeEECCCCCEEE-EEE
Confidence 55667889999999996666554332 9999999997754443321 245799999999998 554
No 369
>KOG0310|consensus
Probab=94.36 E-value=2.1 Score=44.67 Aligned_cols=159 Identities=12% Similarity=0.142 Sum_probs=97.4
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCc-eeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGT-CDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD 322 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~-~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~ 322 (790)
........+.+-.||++++.-+..+ .+-+.|..+.. .+.+.... .+.....|+|+++.++.+++ .+
T Consensus 66 rFk~~v~s~~fR~DG~LlaaGD~sG---~V~vfD~k~r~iLR~~~ah~------apv~~~~f~~~d~t~l~s~s----Dd 132 (487)
T KOG0310|consen 66 RFKDVVYSVDFRSDGRLLAAGDESG---HVKVFDMKSRVILRQLYAHQ------APVHVTKFSPQDNTMLVSGS----DD 132 (487)
T ss_pred hhccceeEEEeecCCeEEEccCCcC---cEEEeccccHHHHHHHhhcc------CceeEEEecccCCeEEEecC----CC
Confidence 3445567888999999666543321 26666644321 12222221 13557889999998875554 23
Q ss_pred CCCCcCcccEEEEEEcCCCCcccCCCcc-cccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee
Q psy463 323 GSTPVDSWDHLTFIDLDDQAGIKDKVPV-PLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI 401 (790)
Q Consensus 323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~-~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 401 (790)
+ -+-.+|+.+.. .. .|+.+...+.. .+|+|....+++++...+ ..+||-....+ .+...+
T Consensus 133 ~--------v~k~~d~s~a~------v~~~l~~htDYVR~-g~~~~~~~hivvtGsYDg--~vrl~DtR~~~--~~v~el 193 (487)
T KOG0310|consen 133 K--------VVKYWDLSTAY------VQAELSGHTDYVRC-GDISPANDHIVVTGSYDG--KVRLWDTRSLT--SRVVEL 193 (487)
T ss_pred c--------eEEEEEcCCcE------EEEEecCCcceeEe-eccccCCCeEEEecCCCc--eEEEEEeccCC--ceeEEe
Confidence 3 34556776665 32 35555555665 789999888999887732 26666555443 222223
Q ss_pred eecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463 402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG 446 (790)
Q Consensus 402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~ 446 (790)
. ..+.+.++.+-|.|+.|+. + +-|++.++|+.+
T Consensus 194 n--------hg~pVe~vl~lpsgs~ias-A---gGn~vkVWDl~~ 226 (487)
T KOG0310|consen 194 N--------HGCPVESVLALPSGSLIAS-A---GGNSVKVWDLTT 226 (487)
T ss_pred c--------CCCceeeEEEcCCCCEEEE-c---CCCeEEEEEecC
Confidence 3 4577888888898887643 2 346699999874
No 370
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=94.33 E-value=0.15 Score=49.21 Aligned_cols=52 Identities=19% Similarity=0.090 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCC---CceEEEEEeCC
Q psy463 566 DQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPS---NVFKCGISVAP 618 (790)
Q Consensus 566 D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~---~~~~~~v~~~~ 618 (790)
....|++++....... ..++.|.|||.||.+|.+++...+. +++..+....+
T Consensus 67 ~q~~A~~yl~~~~~~~-~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 67 QQKSALAYLKKIAKKY-PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHHHHHhC-CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 3345566655422222 2469999999999999998886432 25566665544
No 371
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=94.09 E-value=0.078 Score=52.91 Aligned_cols=61 Identities=15% Similarity=0.132 Sum_probs=47.1
Q ss_pred hccCCccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC-cchHHHHHHHHHH
Q psy463 721 DRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG-VRPHFYHTLERFL 785 (790)
Q Consensus 721 ~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~~i~~fl 785 (790)
.++ ..|-.|+.+..|...+++++.-+++.|+.. .-+.++|+..|...+ .-++.+.-.+.+|
T Consensus 326 ~RL-alpKyivnaSgDdff~pDsa~lYyd~LPG~---kaLrmvPN~~H~~~n~~i~esl~~flnrf 387 (507)
T COG4287 326 LRL-ALPKYIVNASGDDFFVPDSANLYYDDLPGE---KALRMVPNDPHNLINQFIKESLEPFLNRF 387 (507)
T ss_pred hhc-cccceeecccCCcccCCCccceeeccCCCc---eeeeeCCCCcchhhHHHHHHHHHHHHHHH
Confidence 466 799999999999999999999999998754 467889999998875 3344444444444
No 372
>KOG1551|consensus
Probab=93.93 E-value=0.14 Score=48.72 Aligned_cols=55 Identities=13% Similarity=0.020 Sum_probs=41.7
Q ss_pred EEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHH
Q psy463 728 YLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDS 787 (790)
Q Consensus 728 ~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~ 787 (790)
+.++.+++|..+|......+.+.++ |.+++++. .||.-.. ..+.+-++|.+-|++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WP--g~eVr~~e---gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWP--GCEVRYLE---GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCC--CCEEEEee---cCceeeeehhchHHHHHHHHHHHh
Confidence 5667899999999988888888876 45556554 4897665 677777888887765
No 373
>KOG1332|consensus
Probab=93.88 E-value=6.1 Score=37.63 Aligned_cols=157 Identities=11% Similarity=0.104 Sum_probs=79.6
Q ss_pred CCCCEEEEEEEccCCc--EEEEEeccCcceEEEEEECCCCce-eEEEEEeCCCcccccCCceeEccC---C---------
Q psy463 244 NVEPVLSRVNWANESV--VAAWVNRVQNRARITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSD---G--------- 308 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~--~~~~~~r~~~~~~i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spD---g--------- 308 (790)
........++|.|.+- .++....+ +.-.|..++.+++-. ..+...- -++ ..+..|.|- |
T Consensus 100 ~h~~SVNsV~wapheygl~LacasSD-G~vsvl~~~~~g~w~t~ki~~aH----~~G-vnsVswapa~~~g~~~~~~~~~ 173 (299)
T KOG1332|consen 100 AHSASVNSVAWAPHEYGLLLACASSD-GKVSVLTYDSSGGWTTSKIVFAH----EIG-VNSVSWAPASAPGSLVDQGPAA 173 (299)
T ss_pred hhcccceeecccccccceEEEEeeCC-CcEEEEEEcCCCCccchhhhhcc----ccc-cceeeecCcCCCccccccCccc
Confidence 3445677889999887 44444433 333466666664322 2222110 011 457788775 5
Q ss_pred --CEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCC----EEEEEEcCCCCc
Q psy463 309 --KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKEN----NVYFLSTQGSPI 382 (790)
Q Consensus 309 --~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~----~l~~~~~~~~~~ 382 (790)
++|+ ... -+. .-.||..+-+.=+ ..+.|..+..-++. .+|.|.-. +|+-.+.++.
T Consensus 174 ~~krlv-SgG----cDn------~VkiW~~~~~~w~-----~e~~l~~H~dwVRD-VAwaP~~gl~~s~iAS~SqDg~-- 234 (299)
T KOG1332|consen 174 KVKRLV-SGG----CDN------LVKIWKFDSDSWK-----LERTLEGHKDWVRD-VAWAPSVGLPKSTIASCSQDGT-- 234 (299)
T ss_pred ccceee-ccC----Ccc------ceeeeecCCcchh-----hhhhhhhcchhhhh-hhhccccCCCceeeEEecCCCc--
Confidence 2233 111 111 2234444322111 12336655555555 77887642 3333334433
Q ss_pred eEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeec
Q psy463 383 VQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIG 433 (790)
Q Consensus 383 ~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~ 433 (790)
.-||..+.+....+.+.|.. -.+....++||..|..|+.+...
T Consensus 235 -viIwt~~~e~e~wk~tll~~-------f~~~~w~vSWS~sGn~LaVs~Gd 277 (299)
T KOG1332|consen 235 -VIIWTKDEEYEPWKKTLLEE-------FPDVVWRVSWSLSGNILAVSGGD 277 (299)
T ss_pred -EEEEEecCccCccccccccc-------CCcceEEEEEeccccEEEEecCC
Confidence 56676664432233444433 24567889999999988776433
No 374
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=93.88 E-value=0.75 Score=44.29 Aligned_cols=93 Identities=17% Similarity=-0.023 Sum_probs=51.6
Q ss_pred EEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcC
Q psy463 503 LLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYID 582 (790)
Q Consensus 503 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d 582 (790)
.||.+-||..... .....+.+..+.++++||.|++.-|.-+=.+..- + .........+++.+... ...+
T Consensus 18 gvihFiGGaf~ga-~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~~---A------~~~~~~f~~~~~~L~~~-~~~~ 86 (250)
T PF07082_consen 18 GVIHFIGGAFVGA-APQITYRYLLERLADRGYAVIATPYVVTFDHQAI---A------REVWERFERCLRALQKR-GGLD 86 (250)
T ss_pred EEEEEcCcceecc-CcHHHHHHHHHHHHhCCcEEEEEecCCCCcHHHH---H------HHHHHHHHHHHHHHHHh-cCCC
Confidence 4556667766433 3333444444555568999999888532111100 0 01123333455555542 2232
Q ss_pred C--CceEEEEechHHHHHHHHHhcCC
Q psy463 583 K--TRTAIWGWSYGGYATGLALALDP 606 (790)
Q Consensus 583 ~--~ri~i~G~S~GG~~a~~~a~~~p 606 (790)
. -++.=+|||+|+-+-+.+.....
T Consensus 87 ~~~lP~~~vGHSlGcklhlLi~s~~~ 112 (250)
T PF07082_consen 87 PAYLPVYGVGHSLGCKLHLLIGSLFD 112 (250)
T ss_pred cccCCeeeeecccchHHHHHHhhhcc
Confidence 2 26778999999999888776554
No 375
>KOG0289|consensus
Probab=93.74 E-value=7.7 Score=40.10 Aligned_cols=116 Identities=13% Similarity=0.174 Sum_probs=70.2
Q ss_pred CCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463 246 EPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS 324 (790)
Q Consensus 246 ~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~ 324 (790)
+..++...+.|||- +...+..+ .+-++|+..+.. +..-++.. .+...+.||-+|=+++ +.. .++
T Consensus 347 ~v~~ts~~fHpDgLifgtgt~d~----~vkiwdlks~~~--~a~Fpght---~~vk~i~FsENGY~La-t~a----dd~- 411 (506)
T KOG0289|consen 347 DVEYTSAAFHPDGLIFGTGTPDG----VVKIWDLKSQTN--VAKFPGHT---GPVKAISFSENGYWLA-TAA----DDG- 411 (506)
T ss_pred cceeEEeeEcCCceEEeccCCCc----eEEEEEcCCccc--cccCCCCC---CceeEEEeccCceEEE-EEe----cCC-
Confidence 45578899999998 44333333 377788877652 32222211 2356899999998887 444 345
Q ss_pred CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463 325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
.+.++|+..-+ +.+..++... .++.. +.+++.|+++...++. -.+|...-.+
T Consensus 412 -------~V~lwDLRKl~---n~kt~~l~~~-~~v~s-~~fD~SGt~L~~~g~~-----l~Vy~~~k~~ 463 (506)
T KOG0289|consen 412 -------SVKLWDLRKLK---NFKTIQLDEK-KEVNS-LSFDQSGTYLGIAGSD-----LQVYICKKKT 463 (506)
T ss_pred -------eEEEEEehhhc---ccceeecccc-cccee-EEEcCCCCeEEeecce-----eEEEEEeccc
Confidence 48899986433 1123333322 24444 7899999987776443 5666665433
No 376
>PRK02888 nitrous-oxide reductase; Validated
Probab=93.68 E-value=1.1 Score=49.37 Aligned_cols=156 Identities=13% Similarity=0.094 Sum_probs=80.3
Q ss_pred EEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcc
Q psy463 251 RVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSW 330 (790)
Q Consensus 251 ~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~ 330 (790)
.+=++|||+.+...+ .-...+..+|.++.+........+ ......++|||++++++.. +. ..|
T Consensus 197 ~~PlpnDGk~l~~~~--ey~~~vSvID~etmeV~~qV~Vdg------npd~v~~spdGk~afvTsy-Ns-E~G------- 259 (635)
T PRK02888 197 RIPLPNDGKDLDDPK--KYRSLFTAVDAETMEVAWQVMVDG------NLDNVDTDYDGKYAFSTCY-NS-EEG------- 259 (635)
T ss_pred ccccCCCCCEeeccc--ceeEEEEEEECccceEEEEEEeCC------CcccceECCCCCEEEEecc-Cc-ccC-------
Confidence 445688999553332 233457788888765433222221 1347899999999986543 11 123
Q ss_pred cEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCC
Q psy463 331 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSAN 410 (790)
Q Consensus 331 ~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~ 410 (790)
..+..++..... ..+. +.....-.+.+||+..++. . .++-+++...+...-..++.-+.
T Consensus 260 ~tl~em~a~e~d-------~~vv---fni~~iea~vkdGK~~~V~--g-----n~V~VID~~t~~~~~~~v~~yIP---- 318 (635)
T PRK02888 260 VTLAEMMAAERD-------WVVV---FNIARIEEAVKAGKFKTIG--G-----SKVPVVDGRKAANAGSALTRYVP---- 318 (635)
T ss_pred cceeeeccccCc-------eEEE---EchHHHHHhhhCCCEEEEC--C-----CEEEEEECCccccCCcceEEEEE----
Confidence 245555542211 0010 0001112456788876652 1 35667775431000011111000
Q ss_pred CcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463 411 QKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG 446 (790)
Q Consensus 411 ~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~ 446 (790)
-...-..+.+||||++++.+ +..-+.+-++|++.
T Consensus 319 VGKsPHGV~vSPDGkylyVa--nklS~tVSVIDv~k 352 (635)
T PRK02888 319 VPKNPHGVNTSPDGKYFIAN--GKLSPTVTVIDVRK 352 (635)
T ss_pred CCCCccceEECCCCCEEEEe--CCCCCcEEEEEChh
Confidence 01234568899999998765 23356788888765
No 377
>KOG1332|consensus
Probab=93.49 E-value=7.2 Score=37.17 Aligned_cols=76 Identities=13% Similarity=0.094 Sum_probs=43.6
Q ss_pred CCceeEccCC---C-EEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEE
Q psy463 299 FDHLRFSSDG---K-KMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYF 374 (790)
Q Consensus 299 ~~~~~~spDg---~-~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~ 374 (790)
.++.+|.|.- + .|+ .++ .+| .--||..+.+.++ .+.+.|.... .+....+||..|..|.+
T Consensus 210 VRDVAwaP~~gl~~s~iA-S~S----qDg------~viIwt~~~e~e~----wk~tll~~f~-~~~w~vSWS~sGn~LaV 273 (299)
T KOG1332|consen 210 VRDVAWAPSVGLPKSTIA-SCS----QDG------TVIIWTKDEEYEP----WKKTLLEEFP-DVVWRVSWSLSGNILAV 273 (299)
T ss_pred hhhhhhccccCCCceeeE-Eec----CCC------cEEEEEecCccCc----ccccccccCC-cceEEEEEeccccEEEE
Confidence 3578898864 2 233 455 566 3445555533222 2344454432 33344899999998877
Q ss_pred EEcCCCCceEEEEEEEcCC
Q psy463 375 LSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 375 ~~~~~~~~~~~l~~~~~~~ 393 (790)
...+.. ..||+-++++
T Consensus 274 s~GdNk---vtlwke~~~G 289 (299)
T KOG1332|consen 274 SGGDNK---VTLWKENVDG 289 (299)
T ss_pred ecCCcE---EEEEEeCCCC
Confidence 765533 6677766654
No 378
>KOG4378|consensus
Probab=93.42 E-value=8.4 Score=40.54 Aligned_cols=138 Identities=10% Similarity=0.111 Sum_probs=81.3
Q ss_pred ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCc
Q psy463 204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGT 282 (790)
Q Consensus 204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~ 282 (790)
++|-+..+.++.. ...++ +.......-+.+||-.| ++....... .+.++|+.+..
T Consensus 143 Gdiiih~~~t~~~-----tt~f~----------------~~sgqsvRll~ys~skr~lL~~asd~G---~VtlwDv~g~s 198 (673)
T KOG4378|consen 143 GDIIIHGTKTKQK-----TTTFT----------------IDSGQSVRLLRYSPSKRFLLSIASDKG---AVTLWDVQGMS 198 (673)
T ss_pred CcEEEEecccCcc-----cccee----------------cCCCCeEEEeecccccceeeEeeccCC---eEEEEeccCCC
Confidence 5777777777653 23333 23344556888999999 333332221 27778877654
Q ss_pred eeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEE
Q psy463 283 CDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEI 362 (790)
Q Consensus 283 ~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~ 362 (790)
..--..+. .-.+...+.|||-...|++.+. - -..|+++|....+ ....|+-. .... .
T Consensus 199 p~~~~~~~----HsAP~~gicfspsne~l~vsVG----~--------Dkki~~yD~~s~~-----s~~~l~y~-~Pls-t 255 (673)
T KOG4378|consen 199 PIFHASEA----HSAPCRGICFSPSNEALLVSVG----Y--------DKKINIYDIRSQA-----STDRLTYS-HPLS-T 255 (673)
T ss_pred cccchhhh----ccCCcCcceecCCccceEEEec----c--------cceEEEeeccccc-----ccceeeec-CCcc-e
Confidence 43111110 1124568999999988875554 2 2379999976544 23445432 1122 3
Q ss_pred EeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463 363 LAWDEKENNVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
++++++|-+|..-... .+|+.+++.+
T Consensus 256 vaf~~~G~~L~aG~s~-----G~~i~YD~R~ 281 (673)
T KOG4378|consen 256 VAFSECGTYLCAGNSK-----GELIAYDMRS 281 (673)
T ss_pred eeecCCceEEEeecCC-----ceEEEEeccc
Confidence 7899999766554443 6888898876
No 379
>KOG0647|consensus
Probab=93.36 E-value=8.8 Score=37.79 Aligned_cols=84 Identities=21% Similarity=0.199 Sum_probs=50.0
Q ss_pred CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEe
Q psy463 9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRC 88 (790)
Q Consensus 9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~ 88 (790)
+-+++.|||.-+.++-++.=++.+.+|.+...|.. .|+.........-.+.|++|+..++-.. -...+.++
T Consensus 29 sIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~------~~ka~~~~~~PvL~v~WsddgskVf~g~---~Dk~~k~w 99 (347)
T KOG0647|consen 29 SISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQL------VPKAQQSHDGPVLDVCWSDDGSKVFSGG---CDKQAKLW 99 (347)
T ss_pred chheeEeccccCceEEecccCCceEEEEEecCCcc------cchhhhccCCCeEEEEEccCCceEEeec---cCCceEEE
Confidence 34789999966666656677899999999998653 3333333333334567887774332111 12235566
Q ss_pred eCCCCeeeEEEee
Q psy463 89 SINEGTCDVVFSR 101 (790)
Q Consensus 89 ~~~~~~~~~~~~~ 101 (790)
+..+++.+.+-.+
T Consensus 100 DL~S~Q~~~v~~H 112 (347)
T KOG0647|consen 100 DLASGQVSQVAAH 112 (347)
T ss_pred EccCCCeeeeeec
Confidence 6666655554443
No 380
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.22 E-value=0.25 Score=49.88 Aligned_cols=116 Identities=19% Similarity=0.122 Sum_probs=62.0
Q ss_pred CCccEEEEEcCCCCccccccccccchHHHHHhcCCeE--EEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHH
Q psy463 499 KKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIV--VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQE 576 (790)
Q Consensus 499 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~--v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 576 (790)
...-++||+||...+.. + ...-..+++...|+. .+.+..+..+. -+.+...+.--.+...++...+++|..
T Consensus 114 ~~k~vlvFvHGfNntf~--d--av~R~aqI~~d~g~~~~pVvFSWPS~g~---l~~Yn~DreS~~~Sr~aLe~~lr~La~ 186 (377)
T COG4782 114 SAKTVLVFVHGFNNTFE--D--AVYRTAQIVHDSGNDGVPVVFSWPSRGS---LLGYNYDRESTNYSRPALERLLRYLAT 186 (377)
T ss_pred CCCeEEEEEcccCCchh--H--HHHHHHHHHhhcCCCcceEEEEcCCCCe---eeecccchhhhhhhHHHHHHHHHHHHh
Confidence 34568999999865421 1 011122344333433 33344332111 000111111112446777888888887
Q ss_pred hCCCcCCCceEEEEechHHHHHHHHHhc----CCC---CceEEEEEeCCCCCccc
Q psy463 577 NLPYIDKTRTAIWGWSYGGYATGLALAL----DPS---NVFKCGISVAPVTDWIY 624 (790)
Q Consensus 577 ~~~~~d~~ri~i~G~S~GG~~a~~~a~~----~p~---~~~~~~v~~~~~~~~~~ 624 (790)
..+ ..+|.|+.||||.++++.++.+ ... ..++-+|..+|=.+...
T Consensus 187 ~~~---~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 187 DKP---VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred CCC---CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhh
Confidence 333 5799999999999999776543 111 13556666677555443
No 381
>KOG0277|consensus
Probab=93.15 E-value=3.3 Score=39.60 Aligned_cols=163 Identities=16% Similarity=0.250 Sum_probs=93.3
Q ss_pred EEEEcc--CCcE-EEEEec--cCcceEEEEEECCC-CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463 251 RVNWAN--ESVV-AAWVNR--VQNRARITRCSINE-GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS 324 (790)
Q Consensus 251 ~~~wsp--Dg~~-~~~~~r--~~~~~~i~~~~~~~-g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~ 324 (790)
.+.+|| ++++ ++.... -.+..+|+++++.+ +..+....-+ |.+...+.+||+.-..+++.++ .+|
T Consensus 13 svqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d----~~D~LfdV~Wse~~e~~~~~a~----GDG- 83 (311)
T KOG0277|consen 13 SVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYD----TEDGLFDVAWSENHENQVIAAS----GDG- 83 (311)
T ss_pred eeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeee----cccceeEeeecCCCcceEEEEe----cCc-
Confidence 577888 6773 332221 12334699999863 3333222211 1112347999999888886776 566
Q ss_pred CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC-CCCceEEEEEEEcCCCCCCcceeee
Q psy463 325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ-GSPIVQHMYRINIADPTATPECITC 403 (790)
Q Consensus 325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~~~l~~~~~~~~~~~~~~lt~ 403 (790)
.|-++|+.-.. .+.+.+..+.-++.+ ..|++-.+..+.++.- +. .+||..+... .+..
T Consensus 84 -------SLrl~d~~~~s----~Pi~~~kEH~~EV~S-vdwn~~~r~~~ltsSWD~T---iKLW~~~r~~------Sv~T 142 (311)
T KOG0277|consen 84 -------SLRLFDLTMPS----KPIHKFKEHKREVYS-VDWNTVRRRIFLTSSWDGT---IKLWDPNRPN------SVQT 142 (311)
T ss_pred -------eEEEeccCCCC----cchhHHHhhhhheEE-eccccccceeEEeeccCCc---eEeecCCCCc------ceEe
Confidence 46677743221 012233344555655 7898888888777754 43 6777654422 2221
Q ss_pred cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463 404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ 447 (790)
Q Consensus 404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~ 447 (790)
..+++..+.+..|||--.-++.+.++.+.-.++=++..++
T Consensus 143 ----f~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk 182 (311)
T KOG0277|consen 143 ----FNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGK 182 (311)
T ss_pred ----ecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCc
Confidence 2346667888999998766767766666444444444443
No 382
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.14 E-value=0.29 Score=48.14 Aligned_cols=101 Identities=13% Similarity=0.033 Sum_probs=56.2
Q ss_pred cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHH-HHHHHHhCCC
Q psy463 502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINV-TRYLQENLPY 580 (790)
Q Consensus 502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~ 580 (790)
|.|+++|+..|... .+.-....+. .-..|+..+.+|.+.....+ ..+++..+. ++.+.+..|
T Consensus 1 ~pLF~fhp~~G~~~-----~~~~L~~~l~-~~~~v~~l~a~g~~~~~~~~----------~~l~~~a~~yv~~Ir~~QP- 63 (257)
T COG3319 1 PPLFCFHPAGGSVL-----AYAPLAAALG-PLLPVYGLQAPGYGAGEQPF----------ASLDDMAAAYVAAIRRVQP- 63 (257)
T ss_pred CCEEEEcCCCCcHH-----HHHHHHHHhc-cCceeeccccCccccccccc----------CCHHHHHHHHHHHHHHhCC-
Confidence 46889999877621 1111122233 23668888887754322111 234444432 334444344
Q ss_pred cCCCceEEEEechHHHHHHHHHhcC--CCCceEEEEEeCCCCC
Q psy463 581 IDKTRTAIWGWSYGGYATGLALALD--PSNVFKCGISVAPVTD 621 (790)
Q Consensus 581 ~d~~ri~i~G~S~GG~~a~~~a~~~--p~~~~~~~v~~~~~~~ 621 (790)
...+.+.|||+||.+|.-+|.+- ....++.++.+.++..
T Consensus 64 --~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 64 --EGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred --CCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 35899999999999998877542 1224555555544433
No 383
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.09 E-value=9.5 Score=37.38 Aligned_cols=108 Identities=10% Similarity=0.063 Sum_probs=62.4
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCe-EEeEEEeeecCCCEEEEEEc
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRF-TVTEILAWDEKENNVYFLST 377 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~-~~~~~~~~s~dg~~l~~~~~ 377 (790)
.+.+.++|--+.-++++. +.|+ .-+++|..+.. .+..+...+. ...+.-.|||||++||-+-+
T Consensus 70 ~Hgi~~~p~~~ravafAR----rPGt-------f~~vfD~~~~~-----~pv~~~s~~~RHfyGHGvfs~dG~~LYATEn 133 (366)
T COG3490 70 GHGIAFHPALPRAVAFAR----RPGT-------FAMVFDPNGAQ-----EPVTLVSQEGRHFYGHGVFSPDGRLLYATEN 133 (366)
T ss_pred cCCeecCCCCcceEEEEe----cCCc-------eEEEECCCCCc-----CcEEEecccCceeecccccCCCCcEEEeecC
Confidence 457889998776554554 5672 35778887765 2444443322 22333578999999998887
Q ss_pred C--CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463 378 Q--GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSC 431 (790)
Q Consensus 378 ~--~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~ 431 (790)
+ .+.+-.-||... . ...++-. . .+..-.-..+.+.+||+.++..-
T Consensus 134 dfd~~rGViGvYd~r--~---~fqrvgE-~---~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 134 DFDPNRGVIGVYDAR--E---GFQRVGE-F---STHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred CCCCCCceEEEEecc--c---ccceecc-c---ccCCcCcceeEEecCCcEEEEeC
Confidence 7 233334455443 2 1111111 0 00122345689999999988753
No 384
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=92.95 E-value=0.2 Score=44.72 Aligned_cols=53 Identities=30% Similarity=0.278 Sum_probs=34.1
Q ss_pred hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC------CCceEEEEEeCCC
Q psy463 564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP------SNVFKCGISVAPV 619 (790)
Q Consensus 564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p------~~~~~~~v~~~~~ 619 (790)
...+...++.+.++.+ ..+|.++|||+||.+|..++.... ...+.+....+|.
T Consensus 47 ~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~ 105 (140)
T PF01764_consen 47 YDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPR 105 (140)
T ss_dssp HHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S-
T ss_pred HHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCcc
Confidence 4455566666666444 478999999999999877665421 1346666666654
No 385
>KOG0316|consensus
Probab=92.94 E-value=4.9 Score=37.99 Aligned_cols=104 Identities=13% Similarity=0.072 Sum_probs=63.1
Q ss_pred CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463 245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS 324 (790)
Q Consensus 245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~ 324 (790)
..+-+..+.+.-||++......+ ..+.++++-.|.+-.-+..-+. -.-+...|.|..+|+ ... |
T Consensus 16 ~qgaV~avryN~dGnY~ltcGsd---rtvrLWNp~rg~liktYsghG~-----EVlD~~~s~Dnskf~-s~G------g- 79 (307)
T KOG0316|consen 16 AQGAVRAVRYNVDGNYCLTCGSD---RTVRLWNPLRGALIKTYSGHGH-----EVLDAALSSDNSKFA-SCG------G- 79 (307)
T ss_pred cccceEEEEEccCCCEEEEcCCC---ceEEeecccccceeeeecCCCc-----eeeeccccccccccc-cCC------C-
Confidence 34556778888999954433221 1277777777766544433211 134677788888887 332 4
Q ss_pred CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEE
Q psy463 325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLS 376 (790)
Q Consensus 325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~ 376 (790)
-..++++|+.+|+ ..+.+..+...+.. ..|+.+.. +++.+
T Consensus 80 -----Dk~v~vwDV~TGk-----v~Rr~rgH~aqVNt-V~fNeesS-Vv~Sg 119 (307)
T KOG0316|consen 80 -----DKAVQVWDVNTGK-----VDRRFRGHLAQVNT-VRFNEESS-VVASG 119 (307)
T ss_pred -----CceEEEEEcccCe-----eeeecccccceeeE-EEecCcce-EEEec
Confidence 4579999999988 35566655555544 66765543 44443
No 386
>KOG0641|consensus
Probab=92.88 E-value=8.1 Score=36.04 Aligned_cols=73 Identities=16% Similarity=0.121 Sum_probs=47.3
Q ss_pred EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463 248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV 327 (790)
Q Consensus 248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~ 327 (790)
-+..+..-|.|++++.-. ....+.++|+.+|...+-+..-.. -....+|||...++. +.+ -
T Consensus 233 avaav~vdpsgrll~sg~---~dssc~lydirg~r~iq~f~phsa-----dir~vrfsp~a~yll-t~s----y------ 293 (350)
T KOG0641|consen 233 AVAAVAVDPSGRLLASGH---ADSSCMLYDIRGGRMIQRFHPHSA-----DIRCVRFSPGAHYLL-TCS----Y------ 293 (350)
T ss_pred eeEEEEECCCcceeeecc---CCCceEEEEeeCCceeeeeCCCcc-----ceeEEEeCCCceEEE-Eec----c------
Confidence 467888999999665432 233488999999877655543211 145789999876655 555 1
Q ss_pred CcccEEEEEEcCCC
Q psy463 328 DSWDHLTFIDLDDQ 341 (790)
Q Consensus 328 ~~~~~l~~~d~~~~ 341 (790)
-..|-+.|+.+.
T Consensus 294 --d~~ikltdlqgd 305 (350)
T KOG0641|consen 294 --DMKIKLTDLQGD 305 (350)
T ss_pred --cceEEEeecccc
Confidence 235777787654
No 387
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=92.86 E-value=0.32 Score=50.63 Aligned_cols=99 Identities=12% Similarity=0.018 Sum_probs=55.4
Q ss_pred EEEEEcCCCCccccccccccchHHHHHhcCCeE---EEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463 503 LLIHVYGGPSSFQVTERFSVDWNLYLADNKDIV---VAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP 579 (790)
Q Consensus 503 ~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~---v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 579 (790)
.+|++||.... ...|.. ..+.+...|+. +..++..+....... ....+-+.+-++.+..
T Consensus 61 pivlVhG~~~~---~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~~~ql~~~V~~~l~--- 122 (336)
T COG1075 61 PIVLVHGLGGG---YGNFLP--LDYRLAILGWLTNGVYAFELSGGDGTYSL----------AVRGEQLFAYVDEVLA--- 122 (336)
T ss_pred eEEEEccCcCC---cchhhh--hhhhhcchHHHhcccccccccccCCCccc----------cccHHHHHHHHHHHHh---
Confidence 46789997443 222221 22224445555 666665543111100 0223334444444444
Q ss_pred CcCCCceEEEEechHHHHHHHHHhcCCC-CceEEEEEeCCC
Q psy463 580 YIDKTRTAIWGWSYGGYATGLALALDPS-NVFKCGISVAPV 619 (790)
Q Consensus 580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~-~~~~~~v~~~~~ 619 (790)
....+++.++||||||.++.+++...+. ..++.++..++.
T Consensus 123 ~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 123 KTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred hcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 2345899999999999999988887652 256667766654
No 388
>KOG0268|consensus
Probab=92.81 E-value=1.6 Score=43.81 Aligned_cols=143 Identities=10% Similarity=0.131 Sum_probs=78.2
Q ss_pred CCEEEEEEEccCCc-EEEEE-eccCcceEEEEEECCCCce-eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463 246 EPVLSRVNWANESV-VAAWV-NRVQNRARITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD 322 (790)
Q Consensus 246 ~~~~~~~~wspDg~-~~~~~-~r~~~~~~i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~ 322 (790)
...+..+.++|--. +++.. +.+. |+++|+..+.+ +.+..... ...++|+|.+ +.|++. +.+
T Consensus 187 ~Dti~svkfNpvETsILas~~sDrs----IvLyD~R~~~Pl~KVi~~mR-------TN~IswnPea--fnF~~a---~ED 250 (433)
T KOG0268|consen 187 ADSISSVKFNPVETSILASCASDRS----IVLYDLRQASPLKKVILTMR-------TNTICWNPEA--FNFVAA---NED 250 (433)
T ss_pred CCceeEEecCCCcchheeeeccCCc----eEEEecccCCccceeeeecc-------ccceecCccc--cceeec---ccc
Confidence 34456777888777 55544 2222 99999987654 33333221 3479999943 444554 233
Q ss_pred CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463 323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECIT 402 (790)
Q Consensus 323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt 402 (790)
. .||.+|...=+ .+..+-.+-........+||-|+.++-.+-+.. .+||-++-.. ......|
T Consensus 251 ~--------nlY~~DmR~l~-----~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDks---IRIf~~~~~~--SRdiYht 312 (433)
T KOG0268|consen 251 H--------NLYTYDMRNLS-----RPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKS---IRIFPVNHGH--SRDIYHT 312 (433)
T ss_pred c--------cceehhhhhhc-----ccchhhcccceeEEEeccCCCcchhccccccce---EEEeecCCCc--chhhhhH
Confidence 3 69999865322 022222221111223789999997766655532 4555544322 1111112
Q ss_pred ecccccCCCcccEEEEEEecCCcEEEE
Q psy463 403 CDLLTSANQKCSYSGATFSTNVSYYVL 429 (790)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~ 429 (790)
. .-..+..+.||-|.+||+-
T Consensus 313 k-------RMq~V~~Vk~S~Dskyi~S 332 (433)
T KOG0268|consen 313 K-------RMQHVFCVKYSMDSKYIIS 332 (433)
T ss_pred h-------hhheeeEEEEeccccEEEe
Confidence 1 1235667899999998743
No 389
>KOG1920|consensus
Probab=92.54 E-value=7.7 Score=45.67 Aligned_cols=63 Identities=13% Similarity=0.108 Sum_probs=43.5
Q ss_pred CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463 244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS 316 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~ 316 (790)
+++..+..+.+--|+. ++..+..+. |.++|.++.....+...+. ......||||++.++++..
T Consensus 66 ~gd~~i~s~~fl~d~~~i~v~~~~G~----iilvd~et~~~eivg~vd~------GI~aaswS~Dee~l~liT~ 129 (1265)
T KOG1920|consen 66 DGDDEIVSVQFLADTNSICVITALGD----IILVDPETLELEIVGNVDN------GISAASWSPDEELLALITG 129 (1265)
T ss_pred CCCcceEEEEEecccceEEEEecCCc----EEEEcccccceeeeeeccC------ceEEEeecCCCcEEEEEeC
Confidence 3445677888888888 555554443 8888888877665555432 1457999999999986543
No 390
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=92.49 E-value=0.21 Score=48.42 Aligned_cols=20 Identities=30% Similarity=0.486 Sum_probs=17.2
Q ss_pred CceEEEEechHHHHHHHHHh
Q psy463 584 TRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 584 ~ri~i~G~S~GG~~a~~~a~ 603 (790)
.+|.++|||+||.++-.++.
T Consensus 78 ~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALG 97 (217)
T ss_pred ccceEEEecccHHHHHHHHH
Confidence 58999999999999876655
No 391
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=92.20 E-value=5.6 Score=42.33 Aligned_cols=106 Identities=20% Similarity=0.108 Sum_probs=64.3
Q ss_pred CCCccEEEEEcCCCCccccccccccchHHHHHhcCCeE-EEEEcCCCCCCChhhhHhhhhccCCccch-hHHHHHHHHHH
Q psy463 498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIV-VAYIDGRNSALKGNTLKYAGYRRLGTVEI-YDQINVTRYLQ 575 (790)
Q Consensus 498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~-v~~~d~rG~~~~g~~~~~~~~~~~~~~~~-~D~~~~~~~l~ 575 (790)
.-+.|+.|++-|.-.. ++|... .++.+.|.- .+.-|.|--|| +|.- |..++ +.+.+.++..+
T Consensus 286 D~KPPL~VYFSGyR~a----EGFEgy---~MMk~Lg~PfLL~~DpRleGG---aFYl------Gs~eyE~~I~~~I~~~L 349 (511)
T TIGR03712 286 DFKPPLNVYFSGYRPA----EGFEGY---FMMKRLGAPFLLIGDPRLEGG---AFYL------GSDEYEQGIINVIQEKL 349 (511)
T ss_pred CCCCCeEEeeccCccc----CcchhH---HHHHhcCCCeEEeeccccccc---eeee------CcHHHHHHHHHHHHHHH
Confidence 3456899999886543 223222 223334444 56778885333 1110 11111 23344555555
Q ss_pred HhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCCCCcc
Q psy463 576 ENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPVTDWI 623 (790)
Q Consensus 576 ~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~~~~~ 623 (790)
+.++ .+.+.+.+.|.|||-+-|+++++.- .-.|+|.+-|++++.
T Consensus 350 ~~Lg-F~~~qLILSGlSMGTfgAlYYga~l---~P~AIiVgKPL~NLG 393 (511)
T TIGR03712 350 DYLG-FDHDQLILSGLSMGTFGALYYGAKL---SPHAIIVGKPLVNLG 393 (511)
T ss_pred HHhC-CCHHHeeeccccccchhhhhhcccC---CCceEEEcCcccchh
Confidence 4355 7889999999999999999998743 345888888988764
No 392
>KOG1539|consensus
Probab=92.14 E-value=2.2 Score=47.62 Aligned_cols=82 Identities=16% Similarity=0.151 Sum_probs=51.7
Q ss_pred eEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcc
Q psy463 271 ARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV 350 (790)
Q Consensus 271 ~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~ 350 (790)
..|.++|..+.+..+.+..-+ +...+..||||||||+ +++ .++ .|.++|+.++. ..
T Consensus 556 f~I~vvD~~t~kvvR~f~gh~-----nritd~~FS~DgrWli-sas----mD~--------tIr~wDlpt~~------lI 611 (910)
T KOG1539|consen 556 FSIRVVDVVTRKVVREFWGHG-----NRITDMTFSPDGRWLI-SAS----MDS--------TIRTWDLPTGT------LI 611 (910)
T ss_pred eeEEEEEchhhhhhHHhhccc-----cceeeeEeCCCCcEEE-Eee----cCC--------cEEEEeccCcc------ee
Confidence 458888887765544333111 1145899999999998 555 455 58899998876 22
Q ss_pred c-ccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 351 P-LTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 351 ~-lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
- +.-. .... .+++||.|..|+-...+
T Consensus 612 D~~~vd-~~~~-sls~SPngD~LAT~Hvd 638 (910)
T KOG1539|consen 612 DGLLVD-SPCT-SLSFSPNGDFLATVHVD 638 (910)
T ss_pred eeEecC-Ccce-eeEECCCCCEEEEEEec
Confidence 1 1111 1112 37899999977766554
No 393
>KOG2521|consensus
Probab=92.00 E-value=3.8 Score=42.14 Aligned_cols=64 Identities=16% Similarity=0.128 Sum_probs=58.3
Q ss_pred CccEEEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC--cchHHHHHHHHHHHHh
Q psy463 725 DKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG--VRPHFYHTLERFLDSC 788 (790)
Q Consensus 725 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~i~~fl~~~ 788 (790)
..+.|.+.+..|.++|.++.+.+.+..++.|+.++.+-+.++-|..+. .+..+.+...+|++++
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 467888889999999999999999999999999999999999998765 8899999999999876
No 394
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.94 E-value=0.4 Score=43.53 Aligned_cols=25 Identities=28% Similarity=0.226 Sum_probs=21.2
Q ss_pred CCceEEEEechHHHHHHHHHhcCCC
Q psy463 583 KTRTAIWGWSYGGYATGLALALDPS 607 (790)
Q Consensus 583 ~~ri~i~G~S~GG~~a~~~a~~~p~ 607 (790)
..+|.++|||+||.+|..++.....
T Consensus 27 ~~~i~v~GHSlGg~lA~l~a~~~~~ 51 (153)
T cd00741 27 DYKIHVTGHSLGGALAGLAGLDLRG 51 (153)
T ss_pred CCeEEEEEcCHHHHHHHHHHHHHHh
Confidence 5799999999999999888776543
No 395
>KOG4328|consensus
Probab=91.93 E-value=8 Score=40.26 Aligned_cols=164 Identities=16% Similarity=0.217 Sum_probs=94.3
Q ss_pred CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463 244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD 322 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~ 322 (790)
.....++.+.++|... .++.++-++. |-..|++++....++....+..| +....++.+...++|.. .-
T Consensus 232 ~hs~~Vs~l~F~P~n~s~i~ssSyDGt---iR~~D~~~~i~e~v~s~~~d~~~---fs~~d~~~e~~~vl~~~-----~~ 300 (498)
T KOG4328|consen 232 PHSGPVSGLKFSPANTSQIYSSSYDGT---IRLQDFEGNISEEVLSLDTDNIW---FSSLDFSAESRSVLFGD-----NV 300 (498)
T ss_pred cCCccccceEecCCChhheeeeccCce---eeeeeecchhhHHHhhcCcccee---eeeccccCCCccEEEee-----cc
Confidence 3345577888999877 4444433222 88888888877666654333334 34778888887777433 23
Q ss_pred CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEE-cCCCCCCcc-e
Q psy463 323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRIN-IADPTATPE-C 400 (790)
Q Consensus 323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~-~~~~~~~~~-~ 400 (790)
| .+-++|+.++.. ....++.+...+.+ ++..|-..+++.++.-.. ...||-.. +.+ +.. .
T Consensus 301 G--------~f~~iD~R~~~s----~~~~~~lh~kKI~s-v~~NP~~p~~laT~s~D~--T~kIWD~R~l~~---K~sp~ 362 (498)
T KOG4328|consen 301 G--------NFNVIDLRTDGS----EYENLRLHKKKITS-VALNPVCPWFLATASLDQ--TAKIWDLRQLRG---KASPF 362 (498)
T ss_pred c--------ceEEEEeecCCc----cchhhhhhhcccce-eecCCCCchheeecccCc--ceeeeehhhhcC---CCCcc
Confidence 4 344556544320 14445544445554 788888776555544322 14566553 332 222 1
Q ss_pred eeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEec
Q psy463 401 ITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDK 444 (790)
Q Consensus 401 lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~ 444 (790)
|+. ......+.++.|||++-.++.++.... |.++|.
T Consensus 363 lst-----~~HrrsV~sAyFSPs~gtl~TT~~D~~---IRv~ds 398 (498)
T KOG4328|consen 363 LST-----LPHRRSVNSAYFSPSGGTLLTTCQDNE---IRVFDS 398 (498)
T ss_pred eec-----ccccceeeeeEEcCCCCceEeeccCCc---eEEeec
Confidence 221 225678889999999887766654443 556554
No 396
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=91.81 E-value=0.21 Score=46.97 Aligned_cols=70 Identities=14% Similarity=-0.021 Sum_probs=46.0
Q ss_pred eEEEEEcCCCCCCChhh-hHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC
Q psy463 534 IVVAYIDGRNSALKGNT-LKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD 605 (790)
Q Consensus 534 ~~v~~~d~rG~~~~g~~-~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~ 605 (790)
..|++|=||=....... .............+.|+.++.++.+++.. +...++|.|||.|+.+...++..+
T Consensus 46 ~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHHHH
Confidence 45788888754322211 01111112223568999999999888543 346899999999999999988764
No 397
>PRK13613 lipoprotein LpqB; Provisional
Probab=91.60 E-value=28 Score=39.34 Aligned_cols=169 Identities=13% Similarity=0.127 Sum_probs=91.9
Q ss_pred EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce-----eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463 248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC-----DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD 322 (790)
Q Consensus 248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~-----~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~ 322 (790)
...+++.|+||+.+++.... ...+++-++..+.. +.++... ....|+|.++| ++. ++- .+..
T Consensus 364 ~~~s~avS~~g~~~A~v~~~--~~~l~vg~~~~~~~~~~~~~~~~~~~-------~Lt~PS~d~~g-~vW-tvd--~~~~ 430 (599)
T PRK13613 364 PLRRVAVSRDESRAAGISAD--GDSVYVGSLTPGASIGVHSWGVTADG-------RLTSPSWDGRG-DLW-VVD--RDPA 430 (599)
T ss_pred CccceEEcCCCceEEEEcCC--CcEEEEeccCCCCccccccceeeccC-------cccCCcCcCCC-CEE-Eec--CCCC
Confidence 56789999999966666432 23577766544332 2333221 14579999988 565 332 0122
Q ss_pred CCCCcCcccEEEEEEcCCCCcccCCCcccccCC---CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC-CCCCc
Q psy463 323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG---RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD-PTATP 398 (790)
Q Consensus 323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~ 398 (790)
+ ...|.++. .+|+ ...+... ...+.. +..|+||-++++....+.. .+|++--+.- .++.
T Consensus 431 ~------~~vl~v~~-~~G~------~~~V~~~~l~g~~I~~-lrvSrDG~RvAvv~~~~g~--~~v~va~V~R~~~G~- 493 (599)
T PRK13613 431 D------PRLLWLLQ-GDGE------PVEVRTPELDGHRVVA-VRVARDGVRVALIVEKDGR--RSLQIGRIVRDAKAV- 493 (599)
T ss_pred C------ceEEEEEc-CCCc------EEEeeccccCCCEeEE-EEECCCccEEEEEEecCCC--cEEEEEEEEeCCCCc-
Confidence 3 22344444 3444 3222221 113444 8899999999998765221 4555543321 1233
Q ss_pred ceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463 399 ECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ 447 (790)
Q Consensus 399 ~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~ 447 (790)
..|+.. ..+..+.....+++|..+++.++......+...++++.+++.
T Consensus 494 ~~l~~~-~~l~~~l~~v~~~~W~~~~sL~Vlg~~~~~~~~v~~v~vdG~ 541 (599)
T PRK13613 494 VSVEEF-RSLAPELEDVTDMSWAGDSQLVVLGREEGGVQQARYVQVDGS 541 (599)
T ss_pred EEeecc-EEeccCCCccceeEEcCCCEEEEEeccCCCCcceEEEecCCc
Confidence 445432 111112334678899999997776654444444777777764
No 398
>PRK13615 lipoprotein LpqB; Provisional
Probab=91.58 E-value=8.1 Score=42.86 Aligned_cols=99 Identities=16% Similarity=0.194 Sum_probs=50.6
Q ss_pred ceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccceeEEEEeeC
Q psy463 11 SALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQNRARITRCSI 90 (790)
Q Consensus 11 ~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~~~~~~~~~~ 90 (790)
.+++.|+||+.+||+.. + ..+ .+...|+... .-+.-.......|..++ ..|+....+...+.. ..
T Consensus 337 ~s~avS~dg~~~A~v~~-~--~~l-~vg~~~~~~~--------~~~~~~~Lt~PS~d~~g--~vWtv~~g~~~~l~~-~~ 401 (557)
T PRK13615 337 DAATLSADGRQAAVRNA-S--GVW-SVGDGDRDAV--------LLDTRPGLVAPSLDAQG--YVWSTPASDPRGLVA-WG 401 (557)
T ss_pred ccceEcCCCceEEEEcC-C--ceE-EEecCCCcce--------eeccCCccccCcCcCCC--CEEEEeCCCceEEEE-ec
Confidence 57899999999999843 2 233 3333333211 00111123344565444 567766544333332 22
Q ss_pred CCCeeeEEEeecCCCCccc--cCCccccccCCceEEEEeec
Q psy463 91 NEGTCDVVFSRDLDRGWFE--PFDHLRFSSDGKKMLLILSH 129 (790)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~--~~~~~~~spdg~~i~~~~~~ 129 (790)
.+|....+ .. -|.. .....+.|+||-+++.+.+.
T Consensus 402 ~~G~~~~v---~v--~~~~~~~I~~lrvSrDG~R~Avi~~~ 437 (557)
T PRK13615 402 PDGVGHPV---AV--SWTATGRVVSLEVARDGARVLVQLET 437 (557)
T ss_pred CCCceEEe---ec--cccCCCeeEEEEeCCCccEEEEEEec
Confidence 33433222 11 1221 22456889999999887653
No 399
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=91.48 E-value=6.8 Score=41.58 Aligned_cols=113 Identities=13% Similarity=0.067 Sum_probs=57.6
Q ss_pred EEEEEccCCcEEEEEeccCcceEEEEE-ECCC-----CceeEEEEEeCCCc--ccccCCceeEccCCCEEEEEEccccc-
Q psy463 250 SRVNWANESVVAAWVNRVQNRARITRC-SINE-----GTCDVVFSRDLDRG--WFEPFDHLRFSSDGKKMLLILSHNQE- 320 (790)
Q Consensus 250 ~~~~wspDg~~~~~~~r~~~~~~i~~~-~~~~-----g~~~~l~~~~~~~~--~~~~~~~~~~spDg~~i~~~~~~~~~- 320 (790)
..+.+.+|| ++.+... .|+.+ +.++ ++.+.|...-.... ..+....+.|.|||+ |++.......
T Consensus 75 ~Gi~~~~~G--lyV~~~~----~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~-LYv~~G~~~~~ 147 (367)
T TIGR02604 75 TGLAVAVGG--VYVATPP----DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGW-LYFNHGNTLAS 147 (367)
T ss_pred cceeEecCC--EEEeCCC----eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCC-EEEecccCCCc
Confidence 567788898 4444333 37766 3332 23444544322110 112245799999996 6654441000
Q ss_pred ---cCCC---CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEc
Q psy463 321 ---SDGS---TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLST 377 (790)
Q Consensus 321 ---~~g~---~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~ 377 (790)
..+. ........+++++.++++ .+.+..+.....+ ++|+++|+ ++++.+
T Consensus 148 ~~~~~~~~~~~~~~~~g~i~r~~pdg~~------~e~~a~G~rnp~G-l~~d~~G~-l~~tdn 202 (367)
T TIGR02604 148 KVTRPGTSDESRQGLGGGLFRYNPDGGK------LRVVAHGFQNPYG-HSVDSWGD-VFFCDN 202 (367)
T ss_pred eeccCCCccCcccccCceEEEEecCCCe------EEEEecCcCCCcc-ceECCCCC-EEEEcc
Confidence 0000 000001368899988876 6566554322223 78999886 555544
No 400
>KOG0288|consensus
Probab=91.45 E-value=1.9 Score=43.98 Aligned_cols=121 Identities=16% Similarity=0.145 Sum_probs=70.5
Q ss_pred EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCccc-
Q psy463 273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVP- 351 (790)
Q Consensus 273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~- 351 (790)
|-.+|..++.++......+ ...+...|+||..|. ..+ ++. .|-++|+.+.+ +++
T Consensus 324 vRfwD~Rs~~~~~sv~~gg------~vtSl~ls~~g~~lL-sss----RDd--------tl~viDlRt~e------I~~~ 378 (459)
T KOG0288|consen 324 VRFWDIRSADKTRSVPLGG------RVTSLDLSMDGLELL-SSS----RDD--------TLKVIDLRTKE------IRQT 378 (459)
T ss_pred eEEEeccCCceeeEeecCc------ceeeEeeccCCeEEe-eec----CCC--------ceeeeeccccc------EEEE
Confidence 5566655555443332211 145788999999887 334 333 46788887766 443
Q ss_pred ccCCCe----EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEE
Q psy463 352 LTRGRF----TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYY 427 (790)
Q Consensus 352 lt~~~~----~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~ 427 (790)
++...+ +... ..||||+.+++--+.+ +.||+-++.+ ++.+.+-+. .+.+..+.+.+|+|.|+.+
T Consensus 379 ~sA~g~k~asDwtr-vvfSpd~~YvaAGS~d-----gsv~iW~v~t--gKlE~~l~~----s~s~~aI~s~~W~~sG~~L 446 (459)
T KOG0288|consen 379 FSAEGFKCASDWTR-VVFSPDGSYVAAGSAD-----GSVYIWSVFT--GKLEKVLSL----STSNAAITSLSWNPSGSGL 446 (459)
T ss_pred eeccccccccccce-eEECCCCceeeeccCC-----CcEEEEEccC--ceEEEEecc----CCCCcceEEEEEcCCCchh
Confidence 222111 1122 6789999977665555 4566666665 554443321 1122358889999999887
Q ss_pred EEE
Q psy463 428 VLS 430 (790)
Q Consensus 428 ~~~ 430 (790)
+..
T Consensus 447 lsa 449 (459)
T KOG0288|consen 447 LSA 449 (459)
T ss_pred hcc
Confidence 543
No 401
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=91.43 E-value=17 Score=37.91 Aligned_cols=144 Identities=16% Similarity=0.192 Sum_probs=65.6
Q ss_pred CCCCEEEEEEEccC----Cc-EEEEEec----cCcceEEEEEECCCC-----ceeEEEEE-eCCCcccccCCceeEccCC
Q psy463 244 NVEPVLSRVNWANE----SV-VAAWVNR----VQNRARITRCSINEG-----TCDVVFSR-DLDRGWFEPFDHLRFSSDG 308 (790)
Q Consensus 244 ~~~~~~~~~~wspD----g~-~~~~~~r----~~~~~~i~~~~~~~g-----~~~~l~~~-~~~~~~~~~~~~~~~spDg 308 (790)
........+++.|+ +. +++++.. .....+|.++....+ ..+.|... .......+....+.|.|||
T Consensus 46 ~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG 125 (331)
T PF07995_consen 46 DGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDG 125 (331)
T ss_dssp STTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTS
T ss_pred cccCCcccceeccccCCCCEEEEEEEcccCCCCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCC
Confidence 44566778888885 56 6666643 123356777776654 22334332 2201111223468999999
Q ss_pred CEEEEEEcccccc-CCCCCcCcccEEEEEEcCCCCcccCC-------CcccccCCCeEEeEEEeeecCCCEEEEEEcCCC
Q psy463 309 KKMLLILSHNQES-DGSTPVDSWDHLTFIDLDDQAGIKDK-------VPVPLTRGRFTVTEILAWDEKENNVYFLSTQGS 380 (790)
Q Consensus 309 ~~i~~~~~~~~~~-~g~~~~~~~~~l~~~d~~~~~~~~~~-------~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~ 380 (790)
.|++........ ....+....-.|.+++.++.-...+. .......|-....+ ++|+|....|+..-+...
T Consensus 126 -~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~~p~dnP~~~~~~~~~~i~A~GlRN~~~-~~~d~~tg~l~~~d~G~~ 203 (331)
T PF07995_consen 126 -KLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGSIPADNPFVGDDGADSEIYAYGLRNPFG-LAFDPNTGRLWAADNGPD 203 (331)
T ss_dssp -EEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSSB-TTSTTTTSTTSTTTEEEE--SEEEE-EEEETTTTEEEEEEE-SS
T ss_pred -cEEEEeCCCCCcccccccccccceEEEecccCcCCCCCccccCCCceEEEEEeCCCcccc-EEEECCCCcEEEEccCCC
Confidence 577666521110 00001111447899997654100000 01122222222223 789998555666544321
Q ss_pred CceEEEEEEE
Q psy463 381 PIVQHMYRIN 390 (790)
Q Consensus 381 ~~~~~l~~~~ 390 (790)
..-.|.++.
T Consensus 204 -~~dein~i~ 212 (331)
T PF07995_consen 204 -GWDEINRIE 212 (331)
T ss_dssp -SSEEEEEE-
T ss_pred -CCcEEEEec
Confidence 124566554
No 402
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=91.29 E-value=0.29 Score=44.87 Aligned_cols=69 Identities=22% Similarity=0.211 Sum_probs=52.6
Q ss_pred hhccCCccEEEEecCCCcccchhhhHHHHHHHHhcCC-ceEEEEcCCCCCcCC--C--cchHHHHHHHHHHHHh
Q psy463 720 VDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADI-MFQSQTYPDEEHGLI--G--VRPHFYHTLERFLDSC 788 (790)
Q Consensus 720 ~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~-~~~~~~~p~~~H~~~--~--~~~~~~~~i~~fl~~~ 788 (790)
.+.|.++++|-|-|+.|.++.+.++....+.+..... ....++.||+||.-. . .+++++..|.+|+.++
T Consensus 129 p~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 129 PAAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred hHHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 4456578899999999999999998887766554322 235667899999643 2 6789999999999864
No 403
>KOG1538|consensus
Probab=90.99 E-value=27 Score=38.42 Aligned_cols=59 Identities=8% Similarity=0.138 Sum_probs=34.3
Q ss_pred EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCC
Q psy463 363 LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPG 435 (790)
Q Consensus 363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~ 435 (790)
+++-++|.++..-+.++. -++|.-+ + .+|-. ...-...+.++..-|++++++..+..-+
T Consensus 228 isYf~NGEy~LiGGsdk~---L~~fTR~--G-----vrLGT----vg~~D~WIWtV~~~PNsQ~v~~GCqDGT 286 (1081)
T KOG1538|consen 228 ISYFTNGEYILLGGSDKQ---LSLFTRD--G-----VRLGT----VGEQDSWIWTVQAKPNSQYVVVGCQDGT 286 (1081)
T ss_pred heeccCCcEEEEccCCCc---eEEEeec--C-----eEEee----ccccceeEEEEEEccCCceEEEEEccCe
Confidence 456688888777655532 4555421 1 11111 0112346677889999999988876544
No 404
>KOG1063|consensus
Probab=90.90 E-value=2.3 Score=46.39 Aligned_cols=118 Identities=14% Similarity=0.081 Sum_probs=64.4
Q ss_pred EEEEEEccCCcEEEEEeccCc--ceEEEEEECCCCceeE-EEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 249 LSRVNWANESVVAAWVNRVQN--RARITRCSINEGTCDV-VFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~--~~~i~~~~~~~g~~~~-l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
+..++.||+|++++..-+.+. ...|++.+..+-.... |-... +. .....|||||+.|+ .++ ++.
T Consensus 528 v~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~Hs-----LT-VT~l~FSpdg~~LL-svs----RDR-- 594 (764)
T KOG1063|consen 528 VYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHS-----LT-VTRLAFSPDGRYLL-SVS----RDR-- 594 (764)
T ss_pred EEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccc-----eE-EEEEEECCCCcEEE-Eee----cCc--
Confidence 578999999998888776654 4567887766543322 22111 11 34789999999887 666 344
Q ss_pred CcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEE
Q psy463 326 PVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRIN 390 (790)
Q Consensus 326 ~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 390 (790)
...||-.- ++... ......+..+. .+...-.|+||++++ +++.+. ....+|...
T Consensus 595 ----t~sl~~~~-~~~~~--e~~fa~~k~Ht-RIIWdcsW~pde~~F-aTaSRD--K~VkVW~~~ 648 (764)
T KOG1063|consen 595 ----TVSLYEVQ-EDIKD--EFRFACLKAHT-RIIWDCSWSPDEKYF-ATASRD--KKVKVWEEP 648 (764)
T ss_pred ----eEEeeeee-cccch--hhhhccccccc-eEEEEcccCccccee-EEecCC--ceEEEEecc
Confidence 22344331 11110 00011122222 344457899999973 333332 125566654
No 405
>KOG4547|consensus
Probab=90.79 E-value=13 Score=39.99 Aligned_cols=141 Identities=14% Similarity=0.133 Sum_probs=76.9
Q ss_pred ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463 204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC 283 (790)
Q Consensus 204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~ 283 (790)
..|+++++.+|+. ...++.+ ...+....+.|+.+-..++.... ..++..++...+..
T Consensus 80 g~v~~ys~~~g~i-----t~~~st~---------------~h~~~v~~~~~~~~~~ciyS~~a---d~~v~~~~~~~~~~ 136 (541)
T KOG4547|consen 80 GSVLLYSVAGGEI-----TAKLSTD---------------KHYGNVNEILDAQRLGCIYSVGA---DLKVVYILEKEKVI 136 (541)
T ss_pred ccEEEEEecCCeE-----EEEEecC---------------CCCCcceeeecccccCceEecCC---ceeEEEEeccccee
Confidence 6888888888763 2233211 23344455555544443333322 22344555555554
Q ss_pred eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEE
Q psy463 284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL 363 (790)
Q Consensus 284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~ 363 (790)
.++...... ...+...+|||+.++ +++ .+|-++|.++++ ..+..|.+...+.. +
T Consensus 137 ~~~~~~~~~-----~~~sl~is~D~~~l~-~as--------------~~ik~~~~~~ke-----vv~~ftgh~s~v~t-~ 190 (541)
T KOG4547|consen 137 IRIWKEQKP-----LVSSLCISPDGKILL-TAS--------------RQIKVLDIETKE-----VVITFTGHGSPVRT-L 190 (541)
T ss_pred eeeeccCCC-----ccceEEEcCCCCEEE-ecc--------------ceEEEEEccCce-----EEEEecCCCcceEE-E
Confidence 444443221 156899999999776 444 379999999887 34556766555544 4
Q ss_pred eeecC--CC-EEEEEEcCCCCceEEEEEEEcCC
Q psy463 364 AWDEK--EN-NVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 364 ~~s~d--g~-~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
++-.+ |- -.||.+.........++.+.-+.
T Consensus 191 ~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~~ 223 (541)
T KOG4547|consen 191 SFTTLIDGIIGKYVLSSAAAERGITVWVVEKED 223 (541)
T ss_pred EEEEeccccccceeeeccccccceeEEEEEccc
Confidence 44333 22 13555555222225677776644
No 406
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=90.77 E-value=5.7 Score=41.03 Aligned_cols=69 Identities=14% Similarity=0.108 Sum_probs=43.9
Q ss_pred HHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC
Q psy463 526 LYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD 605 (790)
Q Consensus 526 ~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~ 605 (790)
...++++|+.|+-+|--. |=++ .. .......|+...+++...+ -...++.++|+|+|+-+-..+-.+-
T Consensus 280 ~~~l~~~gvpVvGvdsLR---YfW~--~r----tPe~~a~Dl~r~i~~y~~~---w~~~~~~liGySfGADvlP~~~n~L 347 (456)
T COG3946 280 AEALQKQGVPVVGVDSLR---YFWS--ER----TPEQIAADLSRLIRFYARR---WGAKRVLLIGYSFGADVLPFAYNRL 347 (456)
T ss_pred HHHHHHCCCceeeeehhh---hhhc--cC----CHHHHHHHHHHHHHHHHHh---hCcceEEEEeecccchhhHHHHHhC
Confidence 345667999999998432 1111 11 1113467777777777663 3368999999999997766554433
Q ss_pred C
Q psy463 606 P 606 (790)
Q Consensus 606 p 606 (790)
|
T Consensus 348 ~ 348 (456)
T COG3946 348 P 348 (456)
T ss_pred C
Confidence 3
No 407
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=90.53 E-value=0.5 Score=46.36 Aligned_cols=52 Identities=13% Similarity=0.049 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCC----CCceEEEEEeCCC
Q psy463 565 YDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDP----SNVFKCGISVAPV 619 (790)
Q Consensus 565 ~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p----~~~~~~~v~~~~~ 619 (790)
.++...++.+.++.+ ..+|.++|||+||.+|..++.... ...+.+....+|-
T Consensus 112 ~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 112 NQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 344444554444223 468999999999999987766422 2345566655553
No 408
>KOG2111|consensus
Probab=90.45 E-value=20 Score=35.77 Aligned_cols=103 Identities=14% Similarity=0.230 Sum_probs=66.0
Q ss_pred EEEEEeccCcceEEEEEECCCCce---eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEE
Q psy463 260 VAAWVNRVQNRARITRCSINEGTC---DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFI 336 (790)
Q Consensus 260 ~~~~~~r~~~~~~i~~~~~~~g~~---~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~ 336 (790)
++++-.+.. .++-++|+..-+. ..+-..+. ...-.+.+-+|..++ +++ ..| +-|.++
T Consensus 150 ~LafPg~k~--GqvQi~dL~~~~~~~p~~I~AH~s------~Iacv~Ln~~Gt~vA-TaS----tkG-------TLIRIF 209 (346)
T KOG2111|consen 150 LLAFPGFKT--GQVQIVDLASTKPNAPSIINAHDS------DIACVALNLQGTLVA-TAS----TKG-------TLIRIF 209 (346)
T ss_pred EEEcCCCcc--ceEEEEEhhhcCcCCceEEEcccC------ceeEEEEcCCccEEE-Eec----cCc-------EEEEEE
Confidence 666654433 3477777765443 33333222 134678899999888 777 456 357778
Q ss_pred EcCCCCcccCCCcccccCCCe--EEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463 337 DLDDQAGIKDKVPVPLTRGRF--TVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI 391 (790)
Q Consensus 337 d~~~~~~~~~~~~~~lt~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 391 (790)
|..+|+ +...+..|.. ++.. +++|||+.+|+..++.|. -|++.+.-
T Consensus 210 dt~~g~-----~l~E~RRG~d~A~iy~-iaFSp~~s~LavsSdKgT---lHiF~l~~ 257 (346)
T KOG2111|consen 210 DTEDGT-----LLQELRRGVDRADIYC-IAFSPNSSWLAVSSDKGT---LHIFSLRD 257 (346)
T ss_pred EcCCCc-----EeeeeecCCchheEEE-EEeCCCccEEEEEcCCCe---EEEEEeec
Confidence 888776 2444555532 2333 789999999999998866 78877654
No 409
>KOG0302|consensus
Probab=90.41 E-value=5.5 Score=40.33 Aligned_cols=156 Identities=12% Similarity=0.221 Sum_probs=82.5
Q ss_pred EEEEEcc--CCcEEEEEeccCcceEEEEEECCCCcee----EEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 250 SRVNWAN--ESVVAAWVNRVQNRARITRCSINEGTCD----VVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 250 ~~~~wsp--Dg~~~~~~~r~~~~~~i~~~~~~~g~~~----~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
..+.||| .|+++. +.-...|++....+|... .++.. + ..+....|||..+.++++++ -+|
T Consensus 215 y~LdWSp~~~g~Lls----GDc~~~I~lw~~~~g~W~vd~~Pf~gH---~---~SVEDLqWSptE~~vfaScS----~Dg 280 (440)
T KOG0302|consen 215 YGLDWSPIKTGRLLS----GDCVKGIHLWEPSTGSWKVDQRPFTGH---T---KSVEDLQWSPTEDGVFASCS----CDG 280 (440)
T ss_pred eeeeccccccccccc----CccccceEeeeeccCceeecCcccccc---c---cchhhhccCCccCceEEeee----cCc
Confidence 4678998 333221 112233666666655432 11111 1 12458999999999988887 667
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccC-CCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc-CCCCCCccee
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTR-GRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI-ADPTATPECI 401 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~-~~~~~~~~~l 401 (790)
-|.++|...+. ++...+++ ...++ ..++|+.+-..|++-+..|. .+||-+.. .. +++...
T Consensus 281 --------sIrIWDiRs~~----~~~~~~~kAh~sDV-NVISWnr~~~lLasG~DdGt---~~iwDLR~~~~--~~pVA~ 342 (440)
T KOG0302|consen 281 --------SIRIWDIRSGP----KKAAVSTKAHNSDV-NVISWNRREPLLASGGDDGT---LSIWDLRQFKS--GQPVAT 342 (440)
T ss_pred --------eEEEEEecCCC----ccceeEeeccCCce-eeEEccCCcceeeecCCCce---EEEEEhhhccC--CCccee
Confidence 46777876653 01333333 23333 34889877664444333343 66665532 22 222111
Q ss_pred eecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463 402 TCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT 445 (790)
Q Consensus 402 t~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~ 445 (790)
.. -....+.++.|+|....++...... .+|-+.|+.
T Consensus 343 fk------~Hk~pItsieW~p~e~s~iaasg~D--~QitiWDls 378 (440)
T KOG0302|consen 343 FK------YHKAPITSIEWHPHEDSVIAASGED--NQITIWDLS 378 (440)
T ss_pred EE------eccCCeeEEEeccccCceEEeccCC--CcEEEEEee
Confidence 11 1456788899999876554433222 345555543
No 410
>KOG0268|consensus
Probab=90.33 E-value=1.5 Score=43.93 Aligned_cols=140 Identities=13% Similarity=0.236 Sum_probs=78.4
Q ss_pred ccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCcceeccccceEEEEEEeeeccCCccEEEEecccCC
Q psy463 115 RFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQES 194 (790)
Q Consensus 115 ~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (790)
.|+|--..|+-+... -+.|.++|+-.+++ +.. +.-+ -=.|-..|+|.. ..|+..++.
T Consensus 194 kfNpvETsILas~~s------------DrsIvLyD~R~~~P----l~K-Vi~~--mRTN~IswnPea---fnF~~a~ED- 250 (433)
T KOG0268|consen 194 KFNPVETSILASCAS------------DRSIVLYDLRQASP----LKK-VILT--MRTNTICWNPEA---FNFVAANED- 250 (433)
T ss_pred ecCCCcchheeeecc------------CCceEEEecccCCc----cce-eeee--ccccceecCccc---cceeecccc-
Confidence 556666666544422 23799999866542 111 1000 001224677732 566665432
Q ss_pred CCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEE
Q psy463 195 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARI 273 (790)
Q Consensus 195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i 273 (790)
..||.+|...-+. |..+-. +.-.-+..+.+||-|+ ++.-+-... |
T Consensus 251 ---------~nlY~~DmR~l~~-----p~~v~~----------------dhvsAV~dVdfsptG~EfvsgsyDks----I 296 (433)
T KOG0268|consen 251 ---------HNLYTYDMRNLSR-----PLNVHK----------------DHVSAVMDVDFSPTGQEFVSGSYDKS----I 296 (433)
T ss_pred ---------ccceehhhhhhcc-----cchhhc----------------ccceeEEEeccCCCcchhccccccce----E
Confidence 6889988654211 333321 2233467899999999 554332222 7
Q ss_pred EEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463 274 TRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS 316 (790)
Q Consensus 274 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~ 316 (790)
-++....+..+.++.... ........||.|.++|+ ..|
T Consensus 297 RIf~~~~~~SRdiYhtkR----Mq~V~~Vk~S~Dskyi~-SGS 334 (433)
T KOG0268|consen 297 RIFPVNHGHSRDIYHTKR----MQHVFCVKYSMDSKYII-SGS 334 (433)
T ss_pred EEeecCCCcchhhhhHhh----hheeeEEEEeccccEEE-ecC
Confidence 777777777766554321 11244789999999776 666
No 411
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=90.32 E-value=20 Score=35.36 Aligned_cols=205 Identities=15% Similarity=0.214 Sum_probs=91.8
Q ss_pred CCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463 246 EPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS 324 (790)
Q Consensus 246 ~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~ 324 (790)
...++.++|.||.+ +.+..+. ...|+.++.++.-.+.+.- . ++.+ ...+.+.-+|+ ++ ++. |+.+
T Consensus 21 ~~e~SGLTy~pd~~tLfaV~d~---~~~i~els~~G~vlr~i~l-~---g~~D-~EgI~y~g~~~-~v-l~~---Er~~- 86 (248)
T PF06977_consen 21 LDELSGLTYNPDTGTLFAVQDE---PGEIYELSLDGKVLRRIPL-D---GFGD-YEGITYLGNGR-YV-LSE---ERDQ- 86 (248)
T ss_dssp -S-EEEEEEETTTTEEEEEETT---TTEEEEEETT--EEEEEE--S---S-SS-EEEEEE-STTE-EE-EEE---TTTT-
T ss_pred cCCccccEEcCCCCeEEEEECC---CCEEEEEcCCCCEEEEEeC-C---CCCC-ceeEEEECCCE-EE-EEE---cCCC-
Confidence 33478999999987 5555544 2348999986443343322 1 1212 44788887775 33 455 4555
Q ss_pred CCcCcccEEEEEEcCCCCc-ccCCCccccc-----CCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc
Q psy463 325 TPVDSWDHLTFIDLDDQAG-IKDKVPVPLT-----RGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP 398 (790)
Q Consensus 325 ~~~~~~~~l~~~d~~~~~~-~~~~~~~~lt-----~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 398 (790)
.|++++++.... ......+.++ .+.....+ ++|++.++.+++.-. ..| ..||.++........
T Consensus 87 -------~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EG-la~D~~~~~L~v~kE-~~P--~~l~~~~~~~~~~~~ 155 (248)
T PF06977_consen 87 -------RLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEG-LAYDPKTNRLFVAKE-RKP--KRLYEVNGFPGGFDL 155 (248)
T ss_dssp -------EEEEEEE----TT--EEEEEEEE---S---SS--EE-EEEETTTTEEEEEEE-SSS--EEEEEEESTT-SS--
T ss_pred -------cEEEEEEeccccccchhhceEEecccccCCCcceEE-EEEcCCCCEEEEEeC-CCC--hhhEEEccccCccce
Confidence 788888743221 0100111222 12223455 899999998887643 344 789988862100111
Q ss_pred ceeee-cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCCeEEEeccchhHHHhhccCCCCceEEEEEEc
Q psy463 399 ECITC-DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQRLLYWDTNEDLRTALTNITLPSVEYMSVPI 477 (790)
Q Consensus 399 ~~lt~-~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (790)
..... .+..........+.+.+.|....++.-. ...+.|..+|.+++....+....... --...++++|-+++..
T Consensus 156 ~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS--~es~~l~~~d~~G~~~~~~~L~~g~~--gl~~~~~QpEGIa~d~ 231 (248)
T PF06977_consen 156 FVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILS--DESRLLLELDRQGRVVSSLSLDRGFH--GLSKDIPQPEGIAFDP 231 (248)
T ss_dssp EEEE-HHHH-HT--SS---EEEEETTTTEEEEEE--TTTTEEEEE-TT--EEEEEE-STTGG--G-SS---SEEEEEE-T
T ss_pred eeccccccccccceeccccceEEcCCCCeEEEEE--CCCCeEEEECCCCCEEEEEEeCCccc--CcccccCCccEEEECC
Confidence 10000 0000000123566778888755443332 22355777787665433332221110 0123567788888875
Q ss_pred CCC
Q psy463 478 QPN 480 (790)
Q Consensus 478 ~dg 480 (790)
+|
T Consensus 232 -~G 233 (248)
T PF06977_consen 232 -DG 233 (248)
T ss_dssp -T-
T ss_pred -CC
Confidence 44
No 412
>PRK13614 lipoprotein LpqB; Provisional
Probab=90.19 E-value=8.8 Score=42.76 Aligned_cols=107 Identities=18% Similarity=0.274 Sum_probs=53.5
Q ss_pred CceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecccc-eeEEEEe
Q psy463 10 SSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRVQN-RARITRC 88 (790)
Q Consensus 10 ~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~~~-~~~~~~~ 88 (790)
..+++.|+||+.+||+.. ....++.... |+... .-++-.......|..++ ..|+....+ ...+..-
T Consensus 345 ~~s~avS~~g~~~A~~~~--~~~~l~~~~~-g~~~~--------~~~~g~~Lt~PS~d~~g--~vWtv~~g~~~~vv~~~ 411 (573)
T PRK13614 345 PASPAESPVSQTVAFLNG--SRTTLYTVSP-GQPAR--------ALTSGSTLTRPSFSPQD--WVWTAGPGGNGRIVAYR 411 (573)
T ss_pred ccceeecCCCceEEEecC--CCcEEEEecC-CCcce--------eeecCCCccCCcccCCC--CEEEeeCCCCceEEEEe
Confidence 457899999999999843 2246676665 33210 01111123344565444 567765533 2222222
Q ss_pred eCCCCeeeEEEeecCCCCcccc--CCccccccCCceEEEEeec
Q psy463 89 SINEGTCDVVFSRDLDRGWFEP--FDHLRFSSDGKKMLLILSH 129 (790)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~spdg~~i~~~~~~ 129 (790)
...++...........-.|+.. ....+.|+||-+++.+.+.
T Consensus 412 ~~g~~~~~~~~~~~v~~~~l~g~~I~~lrvSrDG~R~Avi~~~ 454 (573)
T PRK13614 412 PTGVAEGAQAPTVTLTADWLAGRTVKELRVSREGVRALVISEQ 454 (573)
T ss_pred cCCCcccccccceeecccccCCCeeEEEEECCCccEEEEEEEe
Confidence 2112221111111111125432 3456889999998887753
No 413
>KOG0303|consensus
Probab=90.01 E-value=25 Score=36.11 Aligned_cols=131 Identities=10% Similarity=0.111 Sum_probs=75.3
Q ss_pred ceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCce
Q psy463 204 DHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTC 283 (790)
Q Consensus 204 ~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~ 283 (790)
..+.+.++++|+. ...| ..+..+.+.+|+-||.++..+.++. .|-++|..+|+.
T Consensus 154 n~v~iWnv~tgea-----li~l------------------~hpd~i~S~sfn~dGs~l~TtckDK---kvRv~dpr~~~~ 207 (472)
T KOG0303|consen 154 NTVSIWNVGTGEA-----LITL------------------DHPDMVYSMSFNRDGSLLCTTCKDK---KVRVIDPRRGTV 207 (472)
T ss_pred ceEEEEeccCCce-----eeec------------------CCCCeEEEEEeccCCceeeeecccc---eeEEEcCCCCcE
Confidence 5777888888863 1222 3456778999999999766665543 288899888765
Q ss_pred eEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEE
Q psy463 284 DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEIL 363 (790)
Q Consensus 284 ~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~ 363 (790)
..-- ....+-. .....|-.+|+ |+ +... .+-. ..++.++|.+.=++ ......|.... .+. .+
T Consensus 208 v~e~--~~heG~k--~~Raifl~~g~-i~-tTGf--sr~s------eRq~aLwdp~nl~e--P~~~~elDtSn-Gvl-~P 269 (472)
T KOG0303|consen 208 VSEG--VAHEGAK--PARAIFLASGK-IF-TTGF--SRMS------ERQIALWDPNNLEE--PIALQELDTSN-GVL-LP 269 (472)
T ss_pred eeec--ccccCCC--cceeEEeccCc-ee-eecc--cccc------ccceeccCcccccC--cceeEEeccCC-ceE-Ee
Confidence 4222 1111111 23578888998 54 4432 1223 45778887654220 00011222222 222 37
Q ss_pred eeecCCCEEEEEEcC
Q psy463 364 AWDEKENNVYFLSTQ 378 (790)
Q Consensus 364 ~~s~dg~~l~~~~~~ 378 (790)
-|++|.+.||..+-.
T Consensus 270 FyD~dt~ivYl~GKG 284 (472)
T KOG0303|consen 270 FYDPDTSIVYLCGKG 284 (472)
T ss_pred eecCCCCEEEEEecC
Confidence 899999877766544
No 414
>KOG0290|consensus
Probab=90.00 E-value=21 Score=35.13 Aligned_cols=159 Identities=8% Similarity=0.113 Sum_probs=81.5
Q ss_pred CCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 244 NVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
..+..+..++|+.+|+-++.+-...+- +.+.|+..-+-..+..+.... ..+--..+|++..-.+.-+.. .++
T Consensus 194 AHDKEV~DIaf~~~s~~~FASvgaDGS--vRmFDLR~leHSTIIYE~p~~--~~pLlRLswnkqDpnymATf~----~dS 265 (364)
T KOG0290|consen 194 AHDKEVYDIAFLKGSRDVFASVGADGS--VRMFDLRSLEHSTIIYEDPSP--STPLLRLSWNKQDPNYMATFA----MDS 265 (364)
T ss_pred ecCcceeEEEeccCccceEEEecCCCc--EEEEEecccccceEEecCCCC--CCcceeeccCcCCchHHhhhh----cCC
Confidence 566778889999988833333222222 666777766555554443210 011123455554433221222 122
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCC--Cccee
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTA--TPECI 401 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~--~~~~l 401 (790)
.++.++|+.--.+ ....|..+...+.+ ++|.|-.+..+-++.+.. +...-++..-.. ....+
T Consensus 266 -------~~V~iLDiR~P~t----pva~L~~H~a~VNg-IaWaPhS~~hictaGDD~----qaliWDl~q~~~~~~~dPi 329 (364)
T KOG0290|consen 266 -------NKVVILDIRVPCT----PVARLRNHQASVNG-IAWAPHSSSHICTAGDDC----QALIWDLQQMPRENGEDPI 329 (364)
T ss_pred -------ceEEEEEecCCCc----ceehhhcCcccccc-eEecCCCCceeeecCCcc----eEEEEecccccccCCCCch
Confidence 4677888753210 14567666666766 899999887766665532 333334332101 11111
Q ss_pred eecccccCCCcccEEEEEEecC-CcEEEEEe
Q psy463 402 TCDLLTSANQKCSYSGATFSTN-VSYYVLSC 431 (790)
Q Consensus 402 t~~~~~~~~~~~~~~~~~~s~d-g~~~~~~~ 431 (790)
.. - .....+..+.||+. ..+|+..+
T Consensus 330 la---y--~a~~EVNqi~Ws~~~~Dwiai~~ 355 (364)
T KOG0290|consen 330 LA---Y--TAGGEVNQIQWSSSQPDWIAICF 355 (364)
T ss_pred hh---h--hccceeeeeeecccCCCEEEEEe
Confidence 10 0 03456778888854 55665543
No 415
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=89.93 E-value=10 Score=40.18 Aligned_cols=56 Identities=14% Similarity=0.200 Sum_probs=35.3
Q ss_pred EEeeecCCCEEEEEEcCC-C--------------CceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcE
Q psy463 362 ILAWDEKENNVYFLSTQG-S--------------PIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSY 426 (790)
Q Consensus 362 ~~~~s~dg~~l~~~~~~~-~--------------~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~ 426 (790)
.+.|.|||+ ||+..... . +....+++++.++ ++.+.+.. +...-..+.|+++|+.
T Consensus 128 ~l~~gpDG~-LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg--~~~e~~a~-------G~rnp~Gl~~d~~G~l 197 (367)
T TIGR02604 128 SLAWGPDGW-LYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDG--GKLRVVAH-------GFQNPYGHSVDSWGDV 197 (367)
T ss_pred CceECCCCC-EEEecccCCCceeccCCCccCcccccCceEEEEecCC--CeEEEEec-------CcCCCccceECCCCCE
Confidence 378999986 87754421 0 0124688888877 55555544 3334456889999876
Q ss_pred E
Q psy463 427 Y 427 (790)
Q Consensus 427 ~ 427 (790)
+
T Consensus 198 ~ 198 (367)
T TIGR02604 198 F 198 (367)
T ss_pred E
Confidence 5
No 416
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.91 E-value=5.4 Score=39.33 Aligned_cols=122 Identities=13% Similarity=0.249 Sum_probs=70.1
Q ss_pred CCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 245 VEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 245 ~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
....++..+|+||.+ +.+..+.+ +.|.-++.++.-.+.+.-.. ..+ ...+.|.-+|+.. ++. |++.
T Consensus 84 ~~~nvS~LTynp~~rtLFav~n~p---~~iVElt~~GdlirtiPL~g----~~D-pE~Ieyig~n~fv--i~d---ER~~ 150 (316)
T COG3204 84 ETANVSSLTYNPDTRTLFAVTNKP---AAIVELTKEGDLIRTIPLTG----FSD-PETIEYIGGNQFV--IVD---ERDR 150 (316)
T ss_pred ccccccceeeCCCcceEEEecCCC---ceEEEEecCCceEEEecccc----cCC-hhHeEEecCCEEE--EEe---hhcc
Confidence 334478999999999 44444433 34888887766555543321 111 3467888888643 344 4555
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCC-----CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-----RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI 391 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~-----~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 391 (790)
.|+.+-++.+.+....+...++-+ .....+ ++|+|..+.++|.-.+. | ..||.+..
T Consensus 151 --------~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEG-lA~d~~~~~l~~aKEr~-P--~~I~~~~~ 211 (316)
T COG3204 151 --------ALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEG-LAWDPVDHRLFVAKERN-P--IGIFEVTQ 211 (316)
T ss_pred --------eEEEEEEcCCccEEeccceEEeccccCCCCcCcee-eecCCCCceEEEEEccC-C--cEEEEEec
Confidence 566665554432111111112111 223345 89999999888876553 4 78888874
No 417
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=89.82 E-value=0.81 Score=48.61 Aligned_cols=104 Identities=17% Similarity=0.200 Sum_probs=54.9
Q ss_pred CCCCccEEEEEcCCCCcccccccccc--------c----h--HHHHHhcCCeEEEEEcCC-CCCCChhhhHhhhhccCCc
Q psy463 497 GHKKYPLLIHVYGGPSSFQVTERFSV--------D----W--NLYLADNKDIVVAYIDGR-NSALKGNTLKYAGYRRLGT 561 (790)
Q Consensus 497 ~~~~~p~vv~~HG~~~~~~~~~~~~~--------~----~--~~~~~~~~G~~v~~~d~r-G~~~~g~~~~~~~~~~~~~ 561 (790)
...+.|+++++-||||+..+.-.+.. . . ...-+-. --.++.+|++ |.|.+ .+.......+. .
T Consensus 97 dp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~-~adLvFiDqPvGTGfS-~a~~~e~~~d~-~ 173 (498)
T COG2939 97 DPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLD-FADLVFIDQPVGTGFS-RALGDEKKKDF-E 173 (498)
T ss_pred CCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCcccccc-CCceEEEecCcccCcc-cccccccccch-h
Confidence 45678999999999998554222210 0 0 0111111 1247888844 55542 22111111111 1
Q ss_pred cchhHHHHHHHHHHHhCCCcCC--CceEEEEechHHHHHHHHHh
Q psy463 562 VEIYDQINVTRYLQENLPYIDK--TRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 562 ~~~~D~~~~~~~l~~~~~~~d~--~ri~i~G~S~GG~~a~~~a~ 603 (790)
..-.|+....+.+.+.++...+ ++.+|+|-||||.-+..+|.
T Consensus 174 ~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~ 217 (498)
T COG2939 174 GAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAH 217 (498)
T ss_pred ccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHH
Confidence 2245666666655544333333 48999999999987765553
No 418
>KOG1408|consensus
Probab=89.75 E-value=25 Score=39.04 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=72.0
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCC-cccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDR-GWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV 327 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~-~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~ 327 (790)
+.....-|..+++...-.+.+ |-+++.++|+.+++++...+. +- .--....|.|-+|+-..+
T Consensus 599 lYDm~Vdp~~k~v~t~cQDrn---irif~i~sgKq~k~FKgs~~~eG~---lIKv~lDPSgiY~atScs----------- 661 (1080)
T KOG1408|consen 599 LYDMAVDPTSKLVVTVCQDRN---IRIFDIESGKQVKSFKGSRDHEGD---LIKVILDPSGIYLATSCS----------- 661 (1080)
T ss_pred EEEeeeCCCcceEEEEecccc---eEEEeccccceeeeecccccCCCc---eEEEEECCCccEEEEeec-----------
Confidence 445556677774433322211 888999999988888753221 10 002345666766663333
Q ss_pred CcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463 328 DSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI 391 (790)
Q Consensus 328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 391 (790)
...|.++|.-+|+ ...+.+.+.-.+.+ +-|.+|-|.|+-.+.++- .-+|+++.
T Consensus 662 --dktl~~~Df~sgE-----cvA~m~GHsE~VTG-~kF~nDCkHlISvsgDgC---IFvW~lp~ 714 (1080)
T KOG1408|consen 662 --DKTLCFVDFVSGE-----CVAQMTGHSEAVTG-VKFLNDCKHLISVSGDGC---IFVWKLPL 714 (1080)
T ss_pred --CCceEEEEeccch-----hhhhhcCcchheee-eeecccchhheeecCCce---EEEEECch
Confidence 2368999998888 56677766655666 779999998877776643 55665544
No 419
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=89.59 E-value=0.9 Score=57.63 Aligned_cols=98 Identities=11% Similarity=-0.054 Sum_probs=57.6
Q ss_pred cEEEEEcCCCCccccccccccchHHHHHhcCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCCCc
Q psy463 502 PLLIHVYGGPSSFQVTERFSVDWNLYLADNKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLPYI 581 (790)
Q Consensus 502 p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~ 581 (790)
|.++++||.++.. ..|. .....+. .++.|+.++.+|.+... . ....++++.+.+...+....
T Consensus 1069 ~~l~~lh~~~g~~---~~~~--~l~~~l~-~~~~v~~~~~~g~~~~~-~---------~~~~l~~la~~~~~~i~~~~-- 1130 (1296)
T PRK10252 1069 PTLFCFHPASGFA---WQFS--VLSRYLD-PQWSIYGIQSPRPDGPM-Q---------TATSLDEVCEAHLATLLEQQ-- 1130 (1296)
T ss_pred CCeEEecCCCCch---HHHH--HHHHhcC-CCCcEEEEECCCCCCCC-C---------CCCCHHHHHHHHHHHHHhhC--
Confidence 5688999987762 1222 1222333 47899999998865321 0 01234444443333332111
Q ss_pred CCCceEEEEechHHHHHHHHHhc---CCCCceEEEEEeCC
Q psy463 582 DKTRTAIWGWSYGGYATGLALAL---DPSNVFKCGISVAP 618 (790)
Q Consensus 582 d~~ri~i~G~S~GG~~a~~~a~~---~p~~~~~~~v~~~~ 618 (790)
...++.++||||||.++..++.+ .+ ..+..++...+
T Consensus 1131 ~~~p~~l~G~S~Gg~vA~e~A~~l~~~~-~~v~~l~l~~~ 1169 (1296)
T PRK10252 1131 PHGPYHLLGYSLGGTLAQGIAARLRARG-EEVAFLGLLDT 1169 (1296)
T ss_pred CCCCEEEEEechhhHHHHHHHHHHHHcC-CceeEEEEecC
Confidence 12579999999999999998875 33 35555555544
No 420
>KOG1523|consensus
Probab=89.53 E-value=24 Score=35.22 Aligned_cols=26 Identities=8% Similarity=0.220 Sum_probs=20.9
Q ss_pred EeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463 363 LAWDEKENNVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
..|+|+|..|++.+.+ .-+..++..+
T Consensus 212 v~fs~sG~~lawv~Hd-----s~v~~~da~~ 237 (361)
T KOG1523|consen 212 VLFSPSGNRLAWVGHD-----STVSFVDAAG 237 (361)
T ss_pred eEeCCCCCEeeEecCC-----CceEEeecCC
Confidence 7899999999999877 4566677655
No 421
>PRK13615 lipoprotein LpqB; Provisional
Probab=89.46 E-value=27 Score=38.94 Aligned_cols=165 Identities=13% Similarity=0.064 Sum_probs=89.1
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcC
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVD 328 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~ 328 (790)
...++.|+||+.+++.+... .+++-.. ++..+.+..... ...|+|.++| ++. ++. +|.
T Consensus 336 ~~s~avS~dg~~~A~v~~~~---~l~vg~~-~~~~~~~~~~~~-------Lt~PS~d~~g-~vW-tv~-----~g~---- 393 (557)
T PRK13615 336 ADAATLSADGRQAAVRNASG---VWSVGDG-DRDAVLLDTRPG-------LVAPSLDAQG-YVW-STP-----ASD---- 393 (557)
T ss_pred cccceEcCCCceEEEEcCCc---eEEEecC-CCcceeeccCCc-------cccCcCcCCC-CEE-EEe-----CCC----
Confidence 36789999999766665432 3444433 244444433211 3479999998 565 332 331
Q ss_pred cccEEEEEEcCCCCcccCCCcccccCC---CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCccee-eec
Q psy463 329 SWDHLTFIDLDDQAGIKDKVPVPLTRG---RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECI-TCD 404 (790)
Q Consensus 329 ~~~~l~~~d~~~~~~~~~~~~~~lt~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~l-t~~ 404 (790)
...+.... .+|+ ...+... ...+. .+..|+||-++++....+.. .+|++..+.-..+.++.| +..
T Consensus 394 -~~~l~~~~-~~G~------~~~v~v~~~~~~~I~-~lrvSrDG~R~Avi~~~~g~--~~V~va~V~R~~~~P~~L~~~p 462 (557)
T PRK13615 394 -PRGLVAWG-PDGV------GHPVAVSWTATGRVV-SLEVARDGARVLVQLETGAG--PQLLVASIVRDGGVPTSLTTTP 462 (557)
T ss_pred -ceEEEEec-CCCc------eEEeeccccCCCeeE-EEEeCCCccEEEEEEecCCC--CEEEEEEEEeCCCcceEeeecc
Confidence 22333322 2333 2222111 11344 38899999999998765221 455553321112556666 432
Q ss_pred ccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463 405 LLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ 447 (790)
Q Consensus 405 ~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~ 447 (790)
+ .+..+.....++.|..+++..+......+..+++++.+.+.
T Consensus 463 ~-~l~~~l~~v~sl~W~~~~~laVl~~~~~~~~~v~~v~v~g~ 504 (557)
T PRK13615 463 L-ELLASPGTPLDATWVDELDVATLTLAPDGERQVELHQVGGP 504 (557)
T ss_pred E-EcccCcCcceeeEEcCCCEEEEEeccCCCCceEEEEECCCc
Confidence 1 11112336678899999997777643333566777777653
No 422
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=89.38 E-value=30 Score=36.06 Aligned_cols=173 Identities=17% Similarity=0.174 Sum_probs=78.0
Q ss_pred EEEEEccCCcEEEEEeccCcceEEEEEECCCCce-eEEEEEeCC-CcccccCCceeEccC---CCEEEEEEccccccCCC
Q psy463 250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTC-DVVFSRDLD-RGWFEPFDHLRFSSD---GKKMLLILSHNQESDGS 324 (790)
Q Consensus 250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~-~~l~~~~~~-~~~~~~~~~~~~spD---g~~i~~~~~~~~~~~g~ 324 (790)
..++|.|||+++.. .+.. .|++++ ..|.. ..+...... .........+++.|+ ...||+..+......+
T Consensus 5 ~~~a~~pdG~l~v~-e~~G---~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~- 78 (331)
T PF07995_consen 5 RSMAFLPDGRLLVA-ERSG---RIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGG- 78 (331)
T ss_dssp EEEEEETTSCEEEE-ETTT---EEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSS-
T ss_pred eEEEEeCCCcEEEE-eCCc---eEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCC-
Confidence 36789999985443 3322 388888 44443 444443210 001111235667774 3445544431100111
Q ss_pred CCcCcccEEEEEEcCCCCc-ccCCCcccc----cC--CCeEEeEEEeeecCCCEEEEEEcC-CC--------CceEEEEE
Q psy463 325 TPVDSWDHLTFIDLDDQAG-IKDKVPVPL----TR--GRFTVTEILAWDEKENNVYFLSTQ-GS--------PIVQHMYR 388 (790)
Q Consensus 325 ~~~~~~~~l~~~d~~~~~~-~~~~~~~~l----t~--~~~~~~~~~~~s~dg~~l~~~~~~-~~--------~~~~~l~~ 388 (790)
.....|.++....+.. .. ..+.| .. ........+.|.||| .||+.... .. .....|++
T Consensus 79 ---~~~~~v~r~~~~~~~~~~~--~~~~l~~~~p~~~~~~H~g~~l~fgpDG-~LYvs~G~~~~~~~~~~~~~~~G~ilr 152 (331)
T PF07995_consen 79 ---DNDNRVVRFTLSDGDGDLS--SEEVLVTGLPDTSSGNHNGGGLAFGPDG-KLYVSVGDGGNDDNAQDPNSLRGKILR 152 (331)
T ss_dssp ---SEEEEEEEEEEETTSCEEE--EEEEEEEEEES-CSSSS-EEEEEE-TTS-EEEEEEB-TTTGGGGCSTTSSTTEEEE
T ss_pred ---CcceeeEEEeccCCccccc--cceEEEEEeCCCCCCCCCCccccCCCCC-cEEEEeCCCCCcccccccccccceEEE
Confidence 1134677666654310 00 01111 11 122223348899999 68887654 11 12357889
Q ss_pred EEcCCCC-----------CCcceeeecccccCCCcccEEEEEEecC-CcEEEEEeecCC-CCeEEEE
Q psy463 389 INIADPT-----------ATPECITCDLLTSANQKCSYSGATFSTN-VSYYVLSCIGPG-IPEIMLF 442 (790)
Q Consensus 389 ~~~~~~~-----------~~~~~lt~~~~~~~~~~~~~~~~~~s~d-g~~~~~~~~~~~-~~~i~~~ 442 (790)
++.++.. ...+..+. +-......+|.|. |+.+ ....+++ .-+|.++
T Consensus 153 i~~dG~~p~dnP~~~~~~~~~~i~A~-------GlRN~~~~~~d~~tg~l~-~~d~G~~~~dein~i 211 (331)
T PF07995_consen 153 IDPDGSIPADNPFVGDDGADSEIYAY-------GLRNPFGLAFDPNTGRLW-AADNGPDGWDEINRI 211 (331)
T ss_dssp EETTSSB-TTSTTTTSTTSTTTEEEE---------SEEEEEEEETTTTEEE-EEEE-SSSSEEEEEE
T ss_pred ecccCcCCCCCccccCCCceEEEEEe-------CCCccccEEEECCCCcEE-EEccCCCCCcEEEEe
Confidence 9876520 01122222 3345567889998 5544 4445554 4444443
No 423
>KOG4283|consensus
Probab=89.26 E-value=12 Score=36.62 Aligned_cols=154 Identities=12% Similarity=0.131 Sum_probs=90.0
Q ss_pred CCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCE-EEEEEccccccCC
Q psy463 246 EPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKK-MLLILSHNQESDG 323 (790)
Q Consensus 246 ~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~-i~~~~~~~~~~~g 323 (790)
...+..+.|-|=.. .....+-+. .+.+.|.++-+....+.-++. ....+|||=... -.+.+. ..+
T Consensus 101 ky~iss~~WyP~DtGmFtssSFDh---tlKVWDtnTlQ~a~~F~me~~------VYshamSp~a~sHcLiA~g----tr~ 167 (397)
T KOG4283|consen 101 KYAISSAIWYPIDTGMFTSSSFDH---TLKVWDTNTLQEAVDFKMEGK------VYSHAMSPMAMSHCLIAAG----TRD 167 (397)
T ss_pred eeeeeeeEEeeecCceeecccccc---eEEEeecccceeeEEeecCce------eehhhcChhhhcceEEEEe----cCC
Confidence 44578899999666 433333332 278888887666555554331 446788886542 221222 122
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC 403 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~ 403 (790)
.++-+-|+.+|. ....|..+..++.. ..|+|...+|.+++.... ..+||-+.-.+ +-..+|-.
T Consensus 168 -------~~VrLCDi~SGs-----~sH~LsGHr~~vla-V~Wsp~~e~vLatgsaDg--~irlWDiRras--gcf~~lD~ 230 (397)
T KOG4283|consen 168 -------VQVRLCDIASGS-----FSHTLSGHRDGVLA-VEWSPSSEWVLATGSADG--AIRLWDIRRAS--GCFRVLDQ 230 (397)
T ss_pred -------CcEEEEeccCCc-----ceeeeccccCceEE-EEeccCceeEEEecCCCc--eEEEEEeeccc--ceeEEeec
Confidence 368888998887 24456666656655 899999998888776522 26677665443 21111111
Q ss_pred c-------ccccCCCcccEEEEEEecCCcEEEE
Q psy463 404 D-------LLTSANQKCSYSGATFSTNVSYYVL 429 (790)
Q Consensus 404 ~-------~~~~~~~~~~~~~~~~s~dg~~~~~ 429 (790)
. +.+-....+-+.+.+|+.||.+++.
T Consensus 231 hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~ 263 (397)
T KOG4283|consen 231 HNTKRPPILKTNTAHYGKVNGLAWTSDARYLAS 263 (397)
T ss_pred ccCccCccccccccccceeeeeeecccchhhhh
Confidence 0 0001113456778899999987754
No 424
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=89.22 E-value=24 Score=34.77 Aligned_cols=198 Identities=12% Similarity=0.168 Sum_probs=88.3
Q ss_pred EeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEE
Q psy463 175 LAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNW 254 (790)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~w 254 (790)
+.|+++++. ++.+... ...|+.+++++.-.++ ..+. ..+-...+++
T Consensus 27 LTy~pd~~t-LfaV~d~-----------~~~i~els~~G~vlr~----i~l~------------------g~~D~EgI~y 72 (248)
T PF06977_consen 27 LTYNPDTGT-LFAVQDE-----------PGEIYELSLDGKVLRR----IPLD------------------GFGDYEGITY 72 (248)
T ss_dssp EEEETTTTE-EEEEETT-----------TTEEEEEETT--EEEE----EE-S------------------S-SSEEEEEE
T ss_pred cEEcCCCCe-EEEEECC-----------CCEEEEEcCCCCEEEE----EeCC------------------CCCCceeEEE
Confidence 578887664 5554432 2688989886432111 1111 2233456788
Q ss_pred ccCCcEEEEEeccCcceEEEEEECC--CCce--e---EEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463 255 ANESVVAAWVNRVQNRARITRCSIN--EGTC--D---VVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV 327 (790)
Q Consensus 255 spDg~~~~~~~r~~~~~~i~~~~~~--~g~~--~---~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~ 327 (790)
.-+|+++....|.+ +|+++++. +... . .+.-.....+- ......+|.|.++.|++ +. ++.
T Consensus 73 ~g~~~~vl~~Er~~---~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N-~G~EGla~D~~~~~L~v-~k---E~~----- 139 (248)
T PF06977_consen 73 LGNGRYVLSEERDQ---RLYIFTIDDDTTSLDRADVQKISLGFPNKGN-KGFEGLAYDPKTNRLFV-AK---ERK----- 139 (248)
T ss_dssp -STTEEEEEETTTT---EEEEEEE----TT--EEEEEEEE---S---S-S--EEEEEETTTTEEEE-EE---ESS-----
T ss_pred ECCCEEEEEEcCCC---cEEEEEEeccccccchhhceEEecccccCCC-cceEEEEEcCCCCEEEE-Ee---CCC-----
Confidence 88888666665543 36666653 2221 1 11111000000 01457999999999884 43 232
Q ss_pred CcccEEEEEEc--CCCCcccCCCcccccCC---CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcce--
Q psy463 328 DSWDHLTFIDL--DDQAGIKDKVPVPLTRG---RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPEC-- 400 (790)
Q Consensus 328 ~~~~~l~~~d~--~~~~~~~~~~~~~lt~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~-- 400 (790)
...||-++. .... ........+... -.+.++ ++++|....++..+... ..|..++.++ ++..
T Consensus 140 --P~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~S~-l~~~p~t~~lliLS~es----~~l~~~d~~G---~~~~~~ 208 (248)
T PF06977_consen 140 --PKRLYEVNGFPGGFD-LFVSDDQDLDDDKLFVRDLSG-LSYDPRTGHLLILSDES----RLLLELDRQG---RVVSSL 208 (248)
T ss_dssp --SEEEEEEESTT-SS---EEEE-HHHH-HT--SS---E-EEEETTTTEEEEEETTT----TEEEEE-TT-----EEEEE
T ss_pred --ChhhEEEccccCccc-eeeccccccccccceeccccc-eEEcCCCCeEEEEECCC----CeEEEECCCC---CEEEEE
Confidence 235777765 1111 000000011100 112333 77899988999998774 4677777655 3222
Q ss_pred -eeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463 401 -ITCDLLTSANQKCSYSGATFSTNVSYYVLS 430 (790)
Q Consensus 401 -lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~ 430 (790)
|......+...-.....+++.++|+.++.+
T Consensus 209 ~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs 239 (248)
T PF06977_consen 209 SLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS 239 (248)
T ss_dssp E-STTGGG-SS---SEEEEEE-TT--EEEEE
T ss_pred EeCCcccCcccccCCccEEEECCCCCEEEEc
Confidence 221100000011235578999999755443
No 425
>KOG1523|consensus
Probab=89.16 E-value=26 Score=35.03 Aligned_cols=175 Identities=17% Similarity=0.230 Sum_probs=85.8
Q ss_pred CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEEC-CCCce--eEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc
Q psy463 244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSI-NEGTC--DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ 319 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~-~~g~~--~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~ 319 (790)
..+..++.+.|+|.+. ++....... -|+... ++++- +.+..+-+ +......|||.+.+|+ +.+
T Consensus 53 ~Hd~~vtgvdWap~snrIvtcs~drn----ayVw~~~~~~~WkptlvLlRiN-----rAAt~V~WsP~enkFA-VgS--- 119 (361)
T KOG1523|consen 53 EHDKIVTGVDWAPKSNRIVTCSHDRN----AYVWTQPSGGTWKPTLVLLRIN-----RAATCVKWSPKENKFA-VGS--- 119 (361)
T ss_pred hhCcceeEEeecCCCCceeEccCCCC----ccccccCCCCeeccceeEEEec-----cceeeEeecCcCceEE-ecc---
Confidence 4556677899999986 666543322 344444 44432 22222211 1144789999999998 444
Q ss_pred ccCCCCCcCcccEEEEEEcCCCCc--ccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC
Q psy463 320 ESDGSTPVDSWDHLTFIDLDDQAG--IKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT 397 (790)
Q Consensus 320 ~~~g~~~~~~~~~l~~~d~~~~~~--~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 397 (790)
| -.-|-+.-.+..+. ++....+++.. .+.. +.|.|++-.++..+.++.-.-...|+-.++.+...
T Consensus 120 ---g------ar~isVcy~E~ENdWWVsKhikkPirS---tv~s-ldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap 186 (361)
T KOG1523|consen 120 ---G------ARLISVCYYEQENDWWVSKHIKKPIRS---TVTS-LDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAP 186 (361)
T ss_pred ---C------ccEEEEEEEecccceehhhhhCCcccc---ceee-eeccCCcceecccccCcceeEEEEeeeccccCCCC
Confidence 3 12232222222210 00001122211 2333 88999887666655553311233444444432110
Q ss_pred ---cceeeec-c-cccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCCC
Q psy463 398 ---PECITCD-L-LTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTGQ 447 (790)
Q Consensus 398 ---~~~lt~~-~-~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~~ 447 (790)
-..+..+ + .......+.+..+.|||+|..+++..... .+.+.|..+.
T Consensus 187 ~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds---~v~~~da~~p 238 (361)
T KOG1523|consen 187 TPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDS---TVSFVDAAGP 238 (361)
T ss_pred CCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCC---ceEEeecCCC
Confidence 0000000 0 00001345778899999999999874333 3566665543
No 426
>KOG3724|consensus
Probab=89.05 E-value=0.64 Score=51.64 Aligned_cols=40 Identities=15% Similarity=0.151 Sum_probs=28.6
Q ss_pred hhHHHHHHHHHHHhCC---CcC---CCceEEEEechHHHHHHHHHh
Q psy463 564 IYDQINVTRYLQENLP---YID---KTRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 564 ~~D~~~~~~~l~~~~~---~~d---~~ri~i~G~S~GG~~a~~~a~ 603 (790)
.+=+.+|++++.+.+. ..+ +..|+++||||||.+|..++.
T Consensus 156 tEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t 201 (973)
T KOG3724|consen 156 TEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT 201 (973)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh
Confidence 4445667777776432 222 456999999999999988776
No 427
>KOG0307|consensus
Probab=89.03 E-value=6.1 Score=45.97 Aligned_cols=116 Identities=15% Similarity=0.238 Sum_probs=65.6
Q ss_pred CEEEEEEEccCCc-EEEEEeccCcceEEEEEECCC--CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 247 PVLSRVNWANESV-VAAWVNRVQNRARITRCSINE--GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 247 ~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~--g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
...+.+.|.||+. .+.....++..+.|-+.|+.- -..+.+.... .+ .-...|.+.+..++++.. +++
T Consensus 207 ~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~--~G----ilslsWc~~D~~lllSsg----kD~ 276 (1049)
T KOG0307|consen 207 MHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQ--RG----ILSLSWCPQDPRLLLSSG----KDN 276 (1049)
T ss_pred cceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccc--cc----eeeeccCCCCchhhhccc----CCC
Confidence 4567899999998 555555555555577776542 2222221111 11 336889999877774443 556
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCccccc-CCCeEEeEEEeeecCCCEE-EEEEcCCCCceEEEEEEE
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLT-RGRFTVTEILAWDEKENNV-YFLSTQGSPIVQHMYRIN 390 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt-~~~~~~~~~~~~s~dg~~l-~~~~~~~~~~~~~l~~~~ 390 (790)
++..++.++++ ..-.+. .++|-.. ..|.|..-.+ ...+-+|. ..||.+.
T Consensus 277 --------~ii~wN~~tgE-----vl~~~p~~~nW~fd--v~w~pr~P~~~A~asfdgk---I~I~sl~ 327 (1049)
T KOG0307|consen 277 --------RIICWNPNTGE-----VLGELPAQGNWCFD--VQWCPRNPSVMAAASFDGK---ISIYSLQ 327 (1049)
T ss_pred --------CeeEecCCCce-----EeeecCCCCcceee--eeecCCCcchhhhheeccc---eeeeeee
Confidence 68889988877 122332 3444332 6787765533 22233332 5565543
No 428
>KOG1034|consensus
Probab=88.98 E-value=27 Score=35.03 Aligned_cols=84 Identities=13% Similarity=0.212 Sum_probs=57.6
Q ss_pred ccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCC
Q psy463 202 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINE 280 (790)
Q Consensus 202 ~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~ 280 (790)
+.+.|+++|+.+++. ...+. .....+.++.+-|+.- ++...+.++. |-+.+..+
T Consensus 113 ~~GvIrVid~~~~~~-----~~~~~-----------------ghG~sINeik~~p~~~qlvls~SkD~s---vRlwnI~~ 167 (385)
T KOG1034|consen 113 YLGVIRVIDVVSGQC-----SKNYR-----------------GHGGSINEIKFHPDRPQLVLSASKDHS---VRLWNIQT 167 (385)
T ss_pred ceeEEEEEecchhhh-----cccee-----------------ccCccchhhhcCCCCCcEEEEecCCce---EEEEeccC
Confidence 457999999988763 23333 4456677888889876 6555554432 88888889
Q ss_pred CceeEEEEEeCCCcccccCCceeEccCCCEEE
Q psy463 281 GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKML 312 (790)
Q Consensus 281 g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~ 312 (790)
..|..++..- .+..+-.-+..||+||.+|+
T Consensus 168 ~~Cv~VfGG~--egHrdeVLSvD~~~~gd~i~ 197 (385)
T KOG1034|consen 168 DVCVAVFGGV--EGHRDEVLSVDFSLDGDRIA 197 (385)
T ss_pred CeEEEEeccc--ccccCcEEEEEEcCCCCeee
Confidence 9988887532 23333345789999999776
No 429
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=88.43 E-value=0.58 Score=49.87 Aligned_cols=51 Identities=16% Similarity=0.137 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCC-----ceEEEEEeCCC
Q psy463 565 YDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSN-----VFKCGISVAPV 619 (790)
Q Consensus 565 ~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~-----~~~~~v~~~~~ 619 (790)
..+...++.+.+ .+..||.|+||||||.++..++...+.. .++..|.+++.
T Consensus 104 ~~lk~~ie~~~~----~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 104 TKLKQLIEEAYK----KNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHHHHHHHHHHH----hcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCC
Confidence 444455555544 2258999999999999999988877543 46777777765
No 430
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=88.43 E-value=4.7 Score=32.28 Aligned_cols=63 Identities=16% Similarity=0.241 Sum_probs=40.1
Q ss_pred EeeecCCCEEEEEEcC-------------CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEE
Q psy463 363 LAWDEKENNVYFLSTQ-------------GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVL 429 (790)
Q Consensus 363 ~~~s~dg~~l~~~~~~-------------~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~ 429 (790)
+..++++..|||+... ......+|++++..+ ++.+.|-. +-+.-..+++|+|++++++
T Consensus 3 ldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t--~~~~vl~~-------~L~fpNGVals~d~~~vlv 73 (89)
T PF03088_consen 3 LDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPST--KETTVLLD-------GLYFPNGVALSPDESFVLV 73 (89)
T ss_dssp EEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTT--TEEEEEEE-------EESSEEEEEE-TTSSEEEE
T ss_pred eeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCC--CeEEEehh-------CCCccCeEEEcCCCCEEEE
Confidence 4567776678887543 012347899999988 66666665 4456678999999999888
Q ss_pred EeecC
Q psy463 430 SCIGP 434 (790)
Q Consensus 430 ~~~~~ 434 (790)
+....
T Consensus 74 ~Et~~ 78 (89)
T PF03088_consen 74 AETGR 78 (89)
T ss_dssp EEGGG
T ss_pred EeccC
Confidence 75544
No 431
>KOG1963|consensus
Probab=88.42 E-value=35 Score=38.82 Aligned_cols=100 Identities=18% Similarity=0.206 Sum_probs=61.9
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCC--C---ceeEEEEEeCCCccc-ccCCceeEccCCCEEEEEEccccccC
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINE--G---TCDVVFSRDLDRGWF-EPFDHLRFSSDGKKMLLILSHNQESD 322 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~--g---~~~~l~~~~~~~~~~-~~~~~~~~spDg~~i~~~~~~~~~~~ 322 (790)
..-.+.||.+++++...-.+. |.+..--+ + .++.+ .|. .......||+||..|+ ... +.
T Consensus 208 ~t~~~~spn~~~~Aa~d~dGr---I~vw~d~~~~~~~~t~t~l-------HWH~~~V~~L~fS~~G~~Ll-SGG----~E 272 (792)
T KOG1963|consen 208 ITCVALSPNERYLAAGDSDGR---ILVWRDFGSSDDSETCTLL-------HWHHDEVNSLSFSSDGAYLL-SGG----RE 272 (792)
T ss_pred ceeEEeccccceEEEeccCCc---EEEEeccccccccccceEE-------EecccccceeEEecCCceEe-ecc----cc
Confidence 567899999997766654322 44443222 1 12221 233 2256899999999886 443 44
Q ss_pred CCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
| -|.++.+++++ .+.|..-...+.+ +.||||+......-.+
T Consensus 273 ~--------VLv~Wq~~T~~------kqfLPRLgs~I~~-i~vS~ds~~~sl~~~D 313 (792)
T KOG1963|consen 273 G--------VLVLWQLETGK------KQFLPRLGSPILH-IVVSPDSDLYSLVLED 313 (792)
T ss_pred e--------EEEEEeecCCC------cccccccCCeeEE-EEEcCCCCeEEEEecC
Confidence 4 67788888776 5555543334454 7899999866555555
No 432
>PRK13613 lipoprotein LpqB; Provisional
Probab=88.35 E-value=19 Score=40.62 Aligned_cols=108 Identities=14% Similarity=0.077 Sum_probs=55.9
Q ss_pred CCceeEeCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeeecc-cceeE-EE
Q psy463 9 SSSALWFSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVNRV-QNRAR-IT 86 (790)
Q Consensus 9 ~~~~~~wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~r~-~~~~~-~~ 86 (790)
...+++.|+||+.+|++.. ....+|+=++.++....+. .. .-++-.......|..++ -.|+.+. ..... +.
T Consensus 364 ~~~s~avS~~g~~~A~v~~--~~~~l~vg~~~~~~~~~~~-~~--~~~~~~~Lt~PS~d~~g--~vWtvd~~~~~~~vl~ 436 (599)
T PRK13613 364 PLRRVAVSRDESRAAGISA--DGDSVYVGSLTPGASIGVH-SW--GVTADGRLTSPSWDGRG--DLWVVDRDPADPRLLW 436 (599)
T ss_pred CccceEEcCCCceEEEEcC--CCcEEEEeccCCCCccccc-cc--eeeccCcccCCcCcCCC--CEEEecCCCCCceEEE
Confidence 3467899999999999963 3346676666444310000 00 01111223345665444 4677644 22221 22
Q ss_pred EeeCCCCeeeEEEeecCCCCcccc--CCccccccCCceEEEEeec
Q psy463 87 RCSINEGTCDVVFSRDLDRGWFEP--FDHLRFSSDGKKMLLILSH 129 (790)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~spdg~~i~~~~~~ 129 (790)
+... +|....+- . .|+.. ....+.|+||-+++++...
T Consensus 437 v~~~-~G~~~~V~---~--~~l~g~~I~~lrvSrDG~RvAvv~~~ 475 (599)
T PRK13613 437 LLQG-DGEPVEVR---T--PELDGHRVVAVRVARDGVRVALIVEK 475 (599)
T ss_pred EEcC-CCcEEEee---c--cccCCCEeEEEEECCCccEEEEEEec
Confidence 2222 34432211 1 25532 3457889999999988754
No 433
>KOG1009|consensus
Probab=88.30 E-value=12 Score=38.44 Aligned_cols=57 Identities=16% Similarity=0.160 Sum_probs=37.7
Q ss_pred EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463 363 LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI 432 (790)
Q Consensus 363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~ 432 (790)
++|+||+..+.+.+.+ ..++..++.. |...++-.+ +...+..++|.|-+++++--..
T Consensus 129 L~Ws~d~~~l~s~s~d-----ns~~l~Dv~~--G~l~~~~~d------h~~yvqgvawDpl~qyv~s~s~ 185 (434)
T KOG1009|consen 129 LAWSPDSNFLVSGSVD-----NSVRLWDVHA--GQLLAILDD------HEHYVQGVAWDPLNQYVASKSS 185 (434)
T ss_pred hhccCCCceeeeeecc-----ceEEEEEecc--ceeEeeccc------cccccceeecchhhhhhhhhcc
Confidence 7899999988887766 4555566655 554444332 4445566889998888765433
No 434
>KOG1408|consensus
Probab=88.26 E-value=3.6 Score=45.14 Aligned_cols=102 Identities=21% Similarity=0.277 Sum_probs=61.4
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
....+||++|++++ +. .-|. ...+-+++++.-. .+..+..+.+.+.- .+|+|.+++|+-.+..
T Consensus 81 ~t~vAfS~~Gryva-tG-----EcG~-----~pa~kVw~la~h~-----vVAEfvdHKY~vtc-vaFsp~~kyvvSVGsQ 143 (1080)
T KOG1408|consen 81 LTCVAFSQNGRYVA-TG-----ECGR-----TPASKVWSLAFHG-----VVAEFVDHKYNVTC-VAFSPGNKYVVSVGSQ 143 (1080)
T ss_pred eeEEEEcCCCcEEE-ec-----ccCC-----Cccceeeeecccc-----chhhhhhcccccee-eeecCCCcEEEeeccc
Confidence 34689999999876 33 2332 3456677776432 25567777777776 7899999977655443
Q ss_pred CCCceEEEE--EEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEe
Q psy463 379 GSPIVQHMY--RINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSC 431 (790)
Q Consensus 379 ~~~~~~~l~--~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~ 431 (790)
.+ +-.+++ ++++.+.+. .++ ..+.-++||.||+|++.+.
T Consensus 144 HD-MIVnv~dWr~N~~~asn---kis----------s~Vsav~fsEdgSYfvT~g 184 (1080)
T KOG1408|consen 144 HD-MIVNVNDWRVNSSGASN---KIS----------SVVSAVAFSEDGSYFVTSG 184 (1080)
T ss_pred cc-eEEEhhhhhhccccccc---ccc----------eeEEEEEEccCCceeeeee
Confidence 21 222222 444433111 122 2455688999999887653
No 435
>KOG0294|consensus
Probab=87.68 E-value=32 Score=34.33 Aligned_cols=63 Identities=11% Similarity=0.102 Sum_probs=41.9
Q ss_pred CCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463 245 VEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS 316 (790)
Q Consensus 245 ~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~ 316 (790)
..+.+..++..|.||++..+.+++. +.++++-.|+...++.-.. ......|+|.|.++++...
T Consensus 126 H~~~Vt~lsiHPS~KLALsVg~D~~---lr~WNLV~Gr~a~v~~L~~------~at~v~w~~~Gd~F~v~~~ 188 (362)
T KOG0294|consen 126 HKGQVTDLSIHPSGKLALSVGGDQV---LRTWNLVRGRVAFVLNLKN------KATLVSWSPQGDHFVVSGR 188 (362)
T ss_pred cccccceeEecCCCceEEEEcCCce---eeeehhhcCccceeeccCC------cceeeEEcCCCCEEEEEec
Confidence 3344778999999997777766653 6666666665443333211 1336899999998886554
No 436
>KOG0277|consensus
Probab=87.56 E-value=28 Score=33.59 Aligned_cols=159 Identities=11% Similarity=0.073 Sum_probs=78.3
Q ss_pred CCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCC-ceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 246 EPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEG-TCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 246 ~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
...+..++||+.-. .++.. .+++. +.+.|+.-. .+-..+++-. .+ ..+..|++-.+.++++.+ -+|
T Consensus 60 ~D~LfdV~Wse~~e~~~~~a-~GDGS--Lrl~d~~~~s~Pi~~~kEH~----~E-V~Svdwn~~~r~~~ltsS----WD~ 127 (311)
T KOG0277|consen 60 EDGLFDVAWSENHENQVIAA-SGDGS--LRLFDLTMPSKPIHKFKEHK----RE-VYSVDWNTVRRRIFLTSS----WDG 127 (311)
T ss_pred ccceeEeeecCCCcceEEEE-ecCce--EEEeccCCCCcchhHHHhhh----hh-eEEeccccccceeEEeec----cCC
Confidence 44578899999888 33332 22233 444442211 1111121110 01 346788888777775555 677
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEE-EEEEcCCCCceEEEEEEEcCCCCCCcceee
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNV-YFLSTQGSPIVQHMYRINIADPTATPECIT 402 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l-~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt 402 (790)
.|-+++..-++ .....+.+..-+.. ..|+|--.-+ +..+.++. -+||-+...+ +...+.
T Consensus 128 --------TiKLW~~~r~~-----Sv~Tf~gh~~~Iy~-a~~sp~~~nlfas~Sgd~~---l~lwdvr~~g---k~~~i~ 187 (311)
T KOG0277|consen 128 --------TIKLWDPNRPN-----SVQTFNGHNSCIYQ-AAFSPHIPNLFASASGDGT---LRLWDVRSPG---KFMSIE 187 (311)
T ss_pred --------ceEeecCCCCc-----ceEeecCCccEEEE-EecCCCCCCeEEEccCCce---EEEEEecCCC---ceeEEE
Confidence 34555543222 03333333333333 6788865434 33333333 5677666554 322222
Q ss_pred ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463 403 CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT 445 (790)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~ 445 (790)
. .+..+-.-.|+.-...++++... ...|+.+|++
T Consensus 188 a-------h~~Eil~cdw~ky~~~vl~Tg~v--d~~vr~wDir 221 (311)
T KOG0277|consen 188 A-------HNSEILCCDWSKYNHNVLATGGV--DNLVRGWDIR 221 (311)
T ss_pred e-------ccceeEeecccccCCcEEEecCC--CceEEEEehh
Confidence 1 23344555677777767665332 2345555544
No 437
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=87.42 E-value=2.7 Score=31.11 Aligned_cols=45 Identities=18% Similarity=0.116 Sum_probs=24.7
Q ss_pred ceEEEEEEcCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCc
Q psy463 469 SVEYMSVPIQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSS 513 (790)
Q Consensus 469 ~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~ 513 (790)
+.|...+.+.||.-+...-+.+.........++|+|++.||...+
T Consensus 11 ~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~s 55 (63)
T PF04083_consen 11 PCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQS 55 (63)
T ss_dssp --EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--
T ss_pred CcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccC
Confidence 357788899999988877665544111145678899999998876
No 438
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=87.38 E-value=49 Score=36.15 Aligned_cols=193 Identities=12% Similarity=0.090 Sum_probs=103.8
Q ss_pred ccceeEEEecCCcccccCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCc--EEEEEe--ccCcceEEEEEE
Q psy463 202 SWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESV--VAAWVN--RVQNRARITRCS 277 (790)
Q Consensus 202 ~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~--~~~~~~--r~~~~~~i~~~~ 277 (790)
-...|.-+++.|+..+++ .+.++ -......-+.|-|.-. ..-|+. +..++..+.++.
T Consensus 130 ~d~ki~~~~ipg~~~rr~--~r~l~-----------------~N~~qDl~ivWW~~~~~e~~PWsP~~~e~draNl~L~~ 190 (545)
T PF11768_consen 130 LDPKISYVDIPGPKGRRL--ERHLS-----------------VNSSQDLVIVWWPSAQDEVWPWSPISSEKDRANLHLLS 190 (545)
T ss_pred cCceEEEEECCCCCCCcc--ceeEe-----------------eccCCCEEEEEecCCCCCcCCCCCccccchhccEEEEE
Confidence 346788888888776666 44444 1122223355644432 344433 333445688888
Q ss_pred CCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCC-
Q psy463 278 INEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGR- 356 (790)
Q Consensus 278 ~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~- 356 (790)
..+++.+.|.....+ |. .-...||-.....++++......+|.. .-+-.+++...++ .+++.--.
T Consensus 191 ~~~~klEvL~yirTE--~d--Pl~~~Fs~~~~~qi~tVE~s~s~~g~~----~~d~ciYE~~r~k------lqrvsvtsi 256 (545)
T PF11768_consen 191 CSGGKLEVLSYIRTE--ND--PLDVEFSLNQPYQIHTVEQSISVKGEP----SADSCIYECSRNK------LQRVSVTSI 256 (545)
T ss_pred ecCCcEEEEEEEEec--CC--cEEEEccCCCCcEEEEEEEecCCCCCc----eeEEEEEEeecCc------eeEEEEEEE
Confidence 888877777654321 11 124667764444444654322233411 3344556665554 43332111
Q ss_pred ---eEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeec
Q psy463 357 ---FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIG 433 (790)
Q Consensus 357 ---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~ 433 (790)
..+.. .+++|+.++++..-.++. ..| ++... .....+. ..+....++|.|+|..++.. +.
T Consensus 257 pL~s~v~~-ca~sp~E~kLvlGC~DgS---iiL--yD~~~---~~t~~~k-------a~~~P~~iaWHp~gai~~V~-s~ 319 (545)
T PF11768_consen 257 PLPSQVIC-CARSPSEDKLVLGCEDGS---IIL--YDTTR---GVTLLAK-------AEFIPTLIAWHPDGAIFVVG-SE 319 (545)
T ss_pred ecCCcceE-EecCcccceEEEEecCCe---EEE--EEcCC---Ceeeeee-------ecccceEEEEcCCCcEEEEE-cC
Confidence 11222 678999998988877743 444 44433 2222332 23455668999999977553 22
Q ss_pred CCCCeEEEEecCC
Q psy463 434 PGIPEIMLFDKTG 446 (790)
Q Consensus 434 ~~~~~i~~~~~~~ 446 (790)
.+++.++|.+=
T Consensus 320 --qGelQ~FD~AL 330 (545)
T PF11768_consen 320 --QGELQCFDMAL 330 (545)
T ss_pred --CceEEEEEeec
Confidence 35677887654
No 439
>KOG0308|consensus
Probab=87.17 E-value=17 Score=39.89 Aligned_cols=165 Identities=16% Similarity=0.171 Sum_probs=95.4
Q ss_pred CCCCEEEEEEE-ccCCcEEEEEeccCcceEEEEEECCCCceeEE------EEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463 244 NVEPVLSRVNW-ANESVVAAWVNRVQNRARITRCSINEGTCDVV------FSRDLDRGWFEPFDHLRFSSDGKKMLLILS 316 (790)
Q Consensus 244 ~~~~~~~~~~w-spDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l------~~~~~~~~~~~~~~~~~~spDg~~i~~~~~ 316 (790)
....|+..++. .++..+++...-+. +|+++|+++|..+.+ +......+-.....+.+-++.|. ++ ...
T Consensus 115 ~H~DYVkcla~~ak~~~lvaSgGLD~---~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t-~i-vsG 189 (735)
T KOG0308|consen 115 THKDYVKCLAYIAKNNELVASGGLDR---KIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGT-II-VSG 189 (735)
T ss_pred cccchheeeeecccCceeEEecCCCc---cEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcce-EE-Eec
Confidence 55677777777 55555555543222 399999998855322 11111112222233555666663 32 222
Q ss_pred cccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCC
Q psy463 317 HNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTA 396 (790)
Q Consensus 317 ~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 396 (790)
| +...|.++|..+++ +...|..+...+.- +..++||.+++-.+.++. .+||.+ +
T Consensus 190 ------g-----tek~lr~wDprt~~-----kimkLrGHTdNVr~-ll~~dDGt~~ls~sSDgt---IrlWdL------g 243 (735)
T KOG0308|consen 190 ------G-----TEKDLRLWDPRTCK-----KIMKLRGHTDNVRV-LLVNDDGTRLLSASSDGT---IRLWDL------G 243 (735)
T ss_pred ------C-----cccceEEecccccc-----ceeeeeccccceEE-EEEcCCCCeEeecCCCce---EEeeec------c
Confidence 2 25578999998876 35567666666665 678999999988877754 666654 4
Q ss_pred CcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463 397 TPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG 446 (790)
Q Consensus 397 ~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~ 446 (790)
..+|++.-.+ ....+.....+|+=+++++ +..-..|++-|+.+
T Consensus 244 qQrCl~T~~v----H~e~VWaL~~~~sf~~vYs---G~rd~~i~~Tdl~n 286 (735)
T KOG0308|consen 244 QQRCLATYIV----HKEGVWALQSSPSFTHVYS---GGRDGNIYRTDLRN 286 (735)
T ss_pred ccceeeeEEe----ccCceEEEeeCCCcceEEe---cCCCCcEEecccCC
Confidence 5567654211 2223444555565554433 33345688888876
No 440
>KOG0307|consensus
Probab=86.97 E-value=9.7 Score=44.43 Aligned_cols=101 Identities=14% Similarity=0.115 Sum_probs=62.1
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
.+...|.||+..-+.+++ +.++ ..-|-++|+.--.. ..+.++.+...+.. +.|.+.+..+++++..
T Consensus 209 ~S~l~WhP~~aTql~~As---~dd~------~PviqlWDlR~ass----P~k~~~~H~~Gils-lsWc~~D~~lllSsgk 274 (1049)
T KOG0307|consen 209 CSVLAWHPDHATQLLVAS---GDDS------APVIQLWDLRFASS----PLKILEGHQRGILS-LSWCPQDPRLLLSSGK 274 (1049)
T ss_pred eeeeeeCCCCceeeeeec---CCCC------CceeEeecccccCC----chhhhcccccceee-eccCCCCchhhhcccC
Confidence 347999999887665777 5555 45677778653210 14556666666665 8899988777777665
Q ss_pred CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCc
Q psy463 379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVS 425 (790)
Q Consensus 379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~ 425 (790)
. .+++.-+.++ ++ .|.. +.....+++.+.|.|..-
T Consensus 275 D----~~ii~wN~~t--gE--vl~~----~p~~~nW~fdv~w~pr~P 309 (1049)
T KOG0307|consen 275 D----NRIICWNPNT--GE--VLGE----LPAQGNWCFDVQWCPRNP 309 (1049)
T ss_pred C----CCeeEecCCC--ce--Eeee----cCCCCcceeeeeecCCCc
Confidence 3 3555555554 33 2221 112344667788887643
No 441
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=86.41 E-value=46 Score=34.94 Aligned_cols=168 Identities=14% Similarity=0.210 Sum_probs=75.0
Q ss_pred CCc---EEEEEeccC--cceEEEEEECCCCceeEEEEEeC--CCcccccCCceeE-cc-CCCEEEEEEccccccCCCCCc
Q psy463 257 ESV---VAAWVNRVQ--NRARITRCSINEGTCDVVFSRDL--DRGWFEPFDHLRF-SS-DGKKMLLILSHNQESDGSTPV 327 (790)
Q Consensus 257 Dg~---~~~~~~r~~--~~~~i~~~~~~~g~~~~l~~~~~--~~~~~~~~~~~~~-sp-Dg~~i~~~~~~~~~~~g~~~~ 327 (790)
+|+ ++..++|.. +.-.+|.+|..++..+.+..... .....++++--.+ +| +|+..+ +++ .++|
T Consensus 110 ~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya-~v~---~k~G---- 181 (381)
T PF02333_consen 110 NGKTVDLAVASDRSDGRNSLRLFRIDPDTGELTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYA-FVN---GKDG---- 181 (381)
T ss_dssp TTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEE-EEE---ETTS----
T ss_pred CCceEEEEEEecCcCCCCeEEEEEecCCCCcceEcCCCCcccccccccceeeEEeecCCCCcEEE-EEe---cCCc----
Confidence 676 566677754 45679999988776655532100 0011112222222 44 566555 444 4667
Q ss_pred CcccEEEEEEcCC-CCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC-cceeeecc
Q psy463 328 DSWDHLTFIDLDD-QAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT-PECITCDL 405 (790)
Q Consensus 328 ~~~~~l~~~d~~~-~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~~~ 405 (790)
.-+.|.+...+ +. +.....+.+.-.. ++.+ ...+....+||+.-.. .-||+++++...+. .+.+...
T Consensus 182 --~~~Qy~L~~~~~g~-v~~~lVR~f~~~s-Q~EG-CVVDDe~g~LYvgEE~-----~GIW~y~Aep~~~~~~~~v~~~- 250 (381)
T PF02333_consen 182 --RVEQYELTDDGDGK-VSATLVREFKVGS-QPEG-CVVDDETGRLYVGEED-----VGIWRYDAEPEGGNDRTLVASA- 250 (381)
T ss_dssp --EEEEEEEEE-TTSS-EEEEEEEEEE-SS--EEE-EEEETTTTEEEEEETT-----TEEEEEESSCCC-S--EEEEEB-
T ss_pred --eEEEEEEEeCCCCc-EeeEEEEEecCCC-cceE-EEEecccCCEEEecCc-----cEEEEEecCCCCCCcceeeecc-
Confidence 44455554332 22 0001133333222 3344 5667777777775444 57899887642222 2223211
Q ss_pred cccCCCcccEEEEEEe--cCC-cEEEEEeecCCCCeEEEEecCC
Q psy463 406 LTSANQKCSYSGATFS--TNV-SYYVLSCIGPGIPEIMLFDKTG 446 (790)
Q Consensus 406 ~~~~~~~~~~~~~~~s--~dg-~~~~~~~~~~~~~~i~~~~~~~ 446 (790)
.. ..-...+..+++- .++ .||+.+..+.+ .+.+++.++
T Consensus 251 ~g-~~l~aDvEGlaly~~~~g~gYLivSsQG~~--sf~Vy~r~~ 291 (381)
T PF02333_consen 251 DG-DGLVADVEGLALYYGSDGKGYLIVSSQGDN--SFAVYDREG 291 (381)
T ss_dssp SS-SSB-S-EEEEEEEE-CCC-EEEEEEEGGGT--EEEEEESST
T ss_pred cc-cccccCccceEEEecCCCCeEEEEEcCCCC--eEEEEecCC
Confidence 00 0001234445543 444 47777655443 555666543
No 442
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=86.36 E-value=51 Score=35.69 Aligned_cols=117 Identities=15% Similarity=0.230 Sum_probs=55.1
Q ss_pred EEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEe------CCCcccccCCceeEccCC------CEEEEEEcc
Q psy463 250 SRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRD------LDRGWFEPFDHLRFSSDG------KKMLLILSH 317 (790)
Q Consensus 250 ~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~------~~~~~~~~~~~~~~spDg------~~i~~~~~~ 317 (790)
..++|.|||+++. +.|.. -+|++++..++..+.+.... +..+- ..++++||- ++||++.+.
T Consensus 33 w~maflPDG~llV-tER~~--G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GL----lglal~PdF~~~~~n~~lYvsyt~ 105 (454)
T TIGR03606 33 WALLWGPDNQLWV-TERAT--GKILRVNPETGEVKVVFTLPEIVNDAQHNGL----LGLALHPDFMQEKGNPYVYISYTY 105 (454)
T ss_pred eEEEEcCCCeEEE-EEecC--CEEEEEeCCCCceeeeecCCceeccCCCCce----eeEEECCCccccCCCcEEEEEEec
Confidence 4678999998433 33311 13888877665543332111 11222 356677663 356655441
Q ss_pred ccccCCCCCcCcccEEEEEEcCCCC-cccCCCccccc---CCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 318 NQESDGSTPVDSWDHLTFIDLDDQA-GIKDKVPVPLT---RGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 318 ~~~~~g~~~~~~~~~l~~~d~~~~~-~~~~~~~~~lt---~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
..+..-......|.++.++.+. ..... ...++ .......+.+.|+|||+ ||+...+
T Consensus 106 ---~~~~~~~~~~~~I~R~~l~~~~~~l~~~-~~Il~~lP~~~~H~GgrI~FgPDG~-LYVs~GD 165 (454)
T TIGR03606 106 ---KNGDKELPNHTKIVRYTYDKSTQTLEKP-VDLLAGLPAGNDHNGGRLVFGPDGK-IYYTIGE 165 (454)
T ss_pred ---cCCCCCccCCcEEEEEEecCCCCccccc-eEEEecCCCCCCcCCceEEECCCCc-EEEEECC
Confidence 1110000014578787765321 00000 11111 11112233478999996 8876655
No 443
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=86.03 E-value=0.87 Score=44.03 Aligned_cols=58 Identities=28% Similarity=0.316 Sum_probs=45.8
Q ss_pred chhhhhhccccchhhh--ccCCcEEEEeecCCCccChhhHHHHHHHHHhcCcchhcccccC
Q psy463 642 NLEGYKIAALNNKVDR--IRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQRYMG 700 (790)
Q Consensus 642 ~~~~~~~~~~~~~~~~--~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~~~~~~~~~~~~ 700 (790)
....|...++...+.+ .+ .|+|++||+.|.+||+.++.++.++|++.+.......|++
T Consensus 125 ~~~~~~~~s~~~~~~~~~~~-~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~ 184 (213)
T PF00326_consen 125 NPEFYRELSPISPADNVQIK-PPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPG 184 (213)
T ss_dssp SHHHHHHHHHGGGGGGCGGG-SEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT
T ss_pred hhhhhhhhccccccccccCC-CCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCc
Confidence 3566767777777777 44 8999999999999999999999999999887644444433
No 444
>PLN02454 triacylglycerol lipase
Probab=85.62 E-value=1.3 Score=46.39 Aligned_cols=39 Identities=21% Similarity=0.136 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463 564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~ 603 (790)
.+++...++.+++.++. ..-+|.++|||+||.+|..+|.
T Consensus 209 r~qvl~~V~~l~~~Yp~-~~~sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 209 RSQLLAKIKELLERYKD-EKLSIVLTGHSLGASLATLAAF 247 (414)
T ss_pred HHHHHHHHHHHHHhCCC-CCceEEEEecCHHHHHHHHHHH
Confidence 45566677777764542 1225999999999999988874
No 445
>KOG1538|consensus
Probab=85.36 E-value=10 Score=41.43 Aligned_cols=57 Identities=23% Similarity=0.357 Sum_probs=41.5
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEE
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFL 375 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~ 375 (790)
..+..|-|||..+++ +. | ..|+++|...|. ....|-.+...+.- .+||.||+.++--
T Consensus 15 i~d~afkPDGsqL~l-AA------g-------~rlliyD~ndG~-----llqtLKgHKDtVyc-VAys~dGkrFASG 71 (1081)
T KOG1538|consen 15 INDIAFKPDGTQLIL-AA------G-------SRLLVYDTSDGT-----LLQPLKGHKDTVYC-VAYAKDGKRFASG 71 (1081)
T ss_pred hheeEECCCCceEEE-ec------C-------CEEEEEeCCCcc-----cccccccccceEEE-EEEccCCceeccC
Confidence 457999999999984 43 3 369999997665 25567666666655 8999999865433
No 446
>PLN00413 triacylglycerol lipase
Probab=85.32 E-value=1.4 Score=46.89 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=27.4
Q ss_pred hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463 564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~ 603 (790)
.+.+...++.+.+.++ ..++.|+|||+||.+|..++.
T Consensus 267 yy~i~~~Lk~ll~~~p---~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 267 YYTILRHLKEIFDQNP---TSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHHCC---CCeEEEEecCHHHHHHHHHHH
Confidence 3455566666666444 468999999999999988764
No 447
>PRK13614 lipoprotein LpqB; Provisional
Probab=84.98 E-value=72 Score=35.81 Aligned_cols=172 Identities=16% Similarity=0.090 Sum_probs=92.4
Q ss_pred EEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCc
Q psy463 248 VLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPV 327 (790)
Q Consensus 248 ~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~ 327 (790)
....++.|+||+.+++.+.. ...++.... ++..+.+..... ...|+|.++| ++. ++. +|.
T Consensus 344 ~~~s~avS~~g~~~A~~~~~--~~~l~~~~~-g~~~~~~~~g~~-------Lt~PS~d~~g-~vW-tv~-----~g~--- 403 (573)
T PRK13614 344 GPASPAESPVSQTVAFLNGS--RTTLYTVSP-GQPARALTSGST-------LTRPSFSPQD-WVW-TAG-----PGG--- 403 (573)
T ss_pred cccceeecCCCceEEEecCC--CcEEEEecC-CCcceeeecCCC-------ccCCcccCCC-CEE-Eee-----CCC---
Confidence 46688999999966665432 235776665 344454444221 4579999998 565 332 231
Q ss_pred CcccEEEEEEcCCCCcccCCCcccccCC--C-eEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcC-CCCCCcceeee
Q psy463 328 DSWDHLTFIDLDDQAGIKDKVPVPLTRG--R-FTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIA-DPTATPECITC 403 (790)
Q Consensus 328 ~~~~~l~~~d~~~~~~~~~~~~~~lt~~--~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~lt~ 403 (790)
..+|.++..++...........+... . ..+.. +..|+||-++++....+. ..+|++..+. ..+|.++.|+.
T Consensus 404 --~~~vv~~~~~g~~~~~~~~~~~v~~~~l~g~~I~~-lrvSrDG~R~Avi~~~~g--~~~V~va~V~R~~~G~P~~L~~ 478 (573)
T PRK13614 404 --NGRIVAYRPTGVAEGAQAPTVTLTADWLAGRTVKE-LRVSREGVRALVISEQNG--KSRVQVAGIVRNEDGTPRELTA 478 (573)
T ss_pred --CceEEEEecCCCcccccccceeecccccCCCeeEE-EEECCCccEEEEEEEeCC--ccEEEEEEEEeCCCCCeEEccC
Confidence 12565555332110000000011111 1 12443 889999999998875422 1456654331 12356667765
Q ss_pred cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecCC
Q psy463 404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKTG 446 (790)
Q Consensus 404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~~ 446 (790)
.+ ... ......++.|..+++.++......+..+++++.+.+
T Consensus 479 ~~-~~~-~~~~~~sl~W~~~~sl~V~~~~~~~~~~~~~v~v~~ 519 (573)
T PRK13614 479 PI-TLA-ADSDADTGAWVGDSTVVVTKASATSNVVPELLSVDA 519 (573)
T ss_pred ce-ecc-cCCCcceeEEcCCCEEEEEeccCCCcceEEEEEeCC
Confidence 21 111 124566788999999777765443455667766643
No 448
>KOG4283|consensus
Probab=84.82 E-value=43 Score=33.08 Aligned_cols=112 Identities=19% Similarity=0.216 Sum_probs=65.1
Q ss_pred CCEEEEEEEccCCc---EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463 246 EPVLSRVNWANESV---VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD 322 (790)
Q Consensus 246 ~~~~~~~~wspDg~---~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~ 322 (790)
++-+.+-+|||=.. +++...|+ .++-+||+++|.+.-.+..-. +..-...|||...++..+.+ .+
T Consensus 143 e~~VYshamSp~a~sHcLiA~gtr~---~~VrLCDi~SGs~sH~LsGHr-----~~vlaV~Wsp~~e~vLatgs----aD 210 (397)
T KOG4283|consen 143 EGKVYSHAMSPMAMSHCLIAAGTRD---VQVRLCDIASGSFSHTLSGHR-----DGVLAVEWSPSSEWVLATGS----AD 210 (397)
T ss_pred CceeehhhcChhhhcceEEEEecCC---CcEEEEeccCCcceeeecccc-----CceEEEEeccCceeEEEecC----CC
Confidence 34455667888654 55554443 349999999999876654321 11447899999999886666 56
Q ss_pred CCCCcCcccEEEEEEcC--CCCc--cc--CCCccc-c---cCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 323 GSTPVDSWDHLTFIDLD--DQAG--IK--DKVPVP-L---TRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 323 g~~~~~~~~~l~~~d~~--~~~~--~~--~~~~~~-l---t~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
| .+-++|+. +|-. .. +.+..+ + +.....+.+ ++|+-||.+++..+.+
T Consensus 211 g--------~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvng-la~tSd~~~l~~~gtd 267 (397)
T KOG4283|consen 211 G--------AIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNG-LAWTSDARYLASCGTD 267 (397)
T ss_pred c--------eEEEEEeecccceeEEeecccCccCccccccccccceeee-eeecccchhhhhccCc
Confidence 6 23344432 1210 00 000111 1 122233444 8899999888777666
No 449
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=84.69 E-value=3.4 Score=39.33 Aligned_cols=37 Identities=11% Similarity=-0.097 Sum_probs=27.0
Q ss_pred EEEecCCCcccchhhhHHHHHHHHhcCCceEEEEcCCCCCcCCC
Q psy463 729 LLVHGTMDDNVHFQQSMMLAKSLQHADIMFQSQTYPDEEHGLIG 772 (790)
Q Consensus 729 Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~p~~~H~~~~ 772 (790)
..+.|.+|.+.|+++.+.+++.. +....+ +++|....
T Consensus 169 ~aiIg~~D~IFpp~nQ~~~W~~~------~~~~~~-~~~Hy~F~ 205 (213)
T PF04301_consen 169 KAIIGKKDRIFPPENQKRAWQGR------CTIVEI-DAPHYPFF 205 (213)
T ss_pred EEEEcCCCEEeCHHHHHHHHhCc------CcEEEe-cCCCcCch
Confidence 36889999999999988887632 134455 46998764
No 450
>KOG1520|consensus
Probab=84.02 E-value=17 Score=37.56 Aligned_cols=136 Identities=15% Similarity=0.168 Sum_probs=72.9
Q ss_pred EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc-------------ccCCCCCcCcccEEEEEEcC
Q psy463 273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ-------------ESDGSTPVDSWDHLTFIDLD 339 (790)
Q Consensus 273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~-------------~~~g~~~~~~~~~l~~~d~~ 339 (790)
|+.++.+++..+.+..+.. +.-.........+++|. |+|+-++.. +.+| .|+.+|..
T Consensus 138 L~~V~p~g~~a~~l~~~~~-G~~~kf~N~ldI~~~g~-vyFTDSSsk~~~rd~~~a~l~g~~~G--------Rl~~YD~~ 207 (376)
T KOG1520|consen 138 LLKVGPEGGLAELLADEAE-GKPFKFLNDLDIDPEGV-VYFTDSSSKYDRRDFVFAALEGDPTG--------RLFRYDPS 207 (376)
T ss_pred eEEECCCCCcceecccccc-CeeeeecCceeEcCCCe-EEEeccccccchhheEEeeecCCCcc--------ceEEecCc
Confidence 7778888877666655432 11111134566677554 555544210 2334 57777776
Q ss_pred CCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCC-CCCcceeeecccccCCCcccEEEE
Q psy463 340 DQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADP-TATPECITCDLLTSANQKCSYSGA 418 (790)
Q Consensus 340 ~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~-~~~~~~lt~~~~~~~~~~~~~~~~ 418 (790)
+++ .+.|-.+-.-..+ ++.|||+..++|.-..- .+|-++=+++. .|+.+..+..+ .+.-.++
T Consensus 208 tK~------~~VLld~L~F~NG-laLS~d~sfvl~~Et~~----~ri~rywi~g~k~gt~EvFa~~L------PG~PDNI 270 (376)
T KOG1520|consen 208 TKV------TKVLLDGLYFPNG-LALSPDGSFVLVAETTT----ARIKRYWIKGPKAGTSEVFAEGL------PGYPDNI 270 (376)
T ss_pred ccc------hhhhhhccccccc-ccCCCCCCEEEEEeecc----ceeeeeEecCCccCchhhHhhcC------CCCCcce
Confidence 665 6666555433334 78899999888875542 23444434331 13333333321 1222346
Q ss_pred EEecCCcEEEEEeecCC
Q psy463 419 TFSTNVSYYVLSCIGPG 435 (790)
Q Consensus 419 ~~s~dg~~~~~~~~~~~ 435 (790)
..+++|.+++......+
T Consensus 271 R~~~~G~fWVal~~~~~ 287 (376)
T KOG1520|consen 271 RRDSTGHFWVALHSKRS 287 (376)
T ss_pred eECCCCCEEEEEecccc
Confidence 77888887766544443
No 451
>PLN02408 phospholipase A1
Probab=83.91 E-value=1.7 Score=45.02 Aligned_cols=37 Identities=16% Similarity=0.025 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463 566 DQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 566 D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~ 603 (790)
.+.+.++.+++.++. ...+|.|+|||+||.+|..++.
T Consensus 183 qVl~eI~~ll~~y~~-~~~sI~vTGHSLGGALAtLaA~ 219 (365)
T PLN02408 183 MVREEIARLLQSYGD-EPLSLTITGHSLGAALATLTAY 219 (365)
T ss_pred HHHHHHHHHHHhcCC-CCceEEEeccchHHHHHHHHHH
Confidence 444556666654442 2346999999999999987765
No 452
>KOG0647|consensus
Probab=83.28 E-value=6.8 Score=38.52 Aligned_cols=97 Identities=19% Similarity=0.195 Sum_probs=59.4
Q ss_pred CCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCce--eEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463 245 VEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTC--DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES 321 (790)
Q Consensus 245 ~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~--~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~ 321 (790)
.+..++.++|||... ++...+. .+.-+||.+... |.. +.+...+ .+.-...||.||.+++ +.+ -
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SW-D~tVR~wevq~~-g~~~~ka~~~~~------~PvL~v~WsddgskVf-~g~----~ 92 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSW-DGTVRIWEVQNS-GQLVPKAQQSHD------GPVLDVCWSDDGSKVF-SGG----C 92 (347)
T ss_pred cccchheeEeccccCceEEeccc-CCceEEEEEecC-CcccchhhhccC------CCeEEEEEccCCceEE-eec----c
Confidence 345678999999555 4434433 344556666544 322 1111111 1244789999998776 554 4
Q ss_pred CCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCC
Q psy463 322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKE 369 (790)
Q Consensus 322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg 369 (790)
++ ++-++|+.+++ ..++..++..+.. ..|-+..
T Consensus 93 Dk--------~~k~wDL~S~Q------~~~v~~Hd~pvkt-~~wv~~~ 125 (347)
T KOG0647|consen 93 DK--------QAKLWDLASGQ------VSQVAAHDAPVKT-CHWVPGM 125 (347)
T ss_pred CC--------ceEEEEccCCC------eeeeeecccceeE-EEEecCC
Confidence 55 67888999998 8787777666654 5665443
No 453
>PLN02571 triacylglycerol lipase
Probab=83.07 E-value=1.9 Score=45.39 Aligned_cols=38 Identities=21% Similarity=0.194 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463 565 YDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 565 ~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~ 603 (790)
+++...++.+.+.++. ..-+|.|+|||+||.+|..+|.
T Consensus 208 ~qvl~eV~~L~~~y~~-e~~sI~VTGHSLGGALAtLaA~ 245 (413)
T PLN02571 208 DQVLNEVGRLVEKYKD-EEISITICGHSLGAALATLNAV 245 (413)
T ss_pred HHHHHHHHHHHHhcCc-ccccEEEeccchHHHHHHHHHH
Confidence 4555666666654431 1237999999999999988775
No 454
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=82.98 E-value=7 Score=31.32 Aligned_cols=73 Identities=18% Similarity=0.186 Sum_probs=43.4
Q ss_pred eeEccCCCEEEEEEcccc-------------ccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecC
Q psy463 302 LRFSSDGKKMLLILSHNQ-------------ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEK 368 (790)
Q Consensus 302 ~~~spDg~~i~~~~~~~~-------------~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~d 368 (790)
....+|+..|+|+-++.. ..+| .|+.+|..+++ .+.|..+-.-..+ ++.++|
T Consensus 3 ldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~G--------Rll~ydp~t~~------~~vl~~~L~fpNG-Vals~d 67 (89)
T PF03088_consen 3 LDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTG--------RLLRYDPSTKE------TTVLLDGLYFPNG-VALSPD 67 (89)
T ss_dssp EEE-TTT--EEEEES-SS--TTGHHHHHHHT---E--------EEEEEETTTTE------EEEEEEEESSEEE-EEE-TT
T ss_pred eeEecCCCEEEEEeCccccCccceeeeeecCCCCc--------CEEEEECCCCe------EEEehhCCCccCe-EEEcCC
Confidence 556777555776655220 1233 89999999987 6666655333334 789999
Q ss_pred CCEEEEEEcCCCCceEEEEEEEcCC
Q psy463 369 ENNVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 369 g~~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
++.|++.-... .+|.++-+++
T Consensus 68 ~~~vlv~Et~~----~Ri~rywl~G 88 (89)
T PF03088_consen 68 ESFVLVAETGR----YRILRYWLKG 88 (89)
T ss_dssp SSEEEEEEGGG----TEEEEEESSS
T ss_pred CCEEEEEeccC----ceEEEEEEeC
Confidence 99888876553 3566665543
No 455
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=82.83 E-value=22 Score=39.49 Aligned_cols=40 Identities=13% Similarity=0.191 Sum_probs=27.1
Q ss_pred EEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEc
Q psy463 273 ITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILS 316 (790)
Q Consensus 273 i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~ 316 (790)
+...+..+++.+++........ ...+.|+|||+.|++...
T Consensus 482 ~~~~~~~~g~~~rf~~~P~gaE----~tG~~fspDg~tlFvniQ 521 (524)
T PF05787_consen 482 VWAYDPDTGELKRFLVGPNGAE----ITGPCFSPDGRTLFVNIQ 521 (524)
T ss_pred eeeccccccceeeeccCCCCcc----cccceECCCCCEEEEEEe
Confidence 5566677777777765432211 457999999999886554
No 456
>PLN02934 triacylglycerol lipase
Probab=82.81 E-value=1.8 Score=46.33 Aligned_cols=37 Identities=19% Similarity=0.174 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463 564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~ 603 (790)
.+.+...++.+++.++ ..++.++|||+||.+|..++.
T Consensus 304 y~~v~~~lk~ll~~~p---~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHK---NAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCC---CCeEEEeccccHHHHHHHHHH
Confidence 4456666777766444 368999999999999988763
No 457
>KOG2321|consensus
Probab=82.77 E-value=78 Score=34.50 Aligned_cols=113 Identities=12% Similarity=0.263 Sum_probs=57.9
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEe-EEEeeecCCCE-EEEEE
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVT-EILAWDEKENN-VYFLS 376 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~-~~~~~s~dg~~-l~~~~ 376 (790)
.....|+.||-.++ +.. ..| +++++|+.+.+ +..+-.+..++. -.+.|-+.+.. .+++.
T Consensus 231 vTal~F~d~gL~~a-VGt----s~G--------~v~iyDLRa~~------pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~ 291 (703)
T KOG2321|consen 231 VTALKFRDDGLHVA-VGT----STG--------SVLIYDLRASK------PLLVKDHGYELPIKKLDWQDTDQQNKVVSM 291 (703)
T ss_pred ceEEEecCCceeEE-eec----cCC--------cEEEEEcccCC------ceeecccCCccceeeecccccCCCceEEec
Confidence 44788999998887 343 467 79999998876 544444433321 12566443221 22222
Q ss_pred cCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEec
Q psy463 377 TQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDK 444 (790)
Q Consensus 377 ~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~ 444 (790)
+..- ..||-- .. |++ .+. .+..+.+..+.+-|++..+.+.-.+...+.+|+-++
T Consensus 292 Dk~~---~kiWd~--~~--Gk~--~as-----iEpt~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~L 345 (703)
T KOG2321|consen 292 DKRI---LKIWDE--CT--GKP--MAS-----IEPTSDLNDFCFVPGSGMFFTANESSKMHTYYIPSL 345 (703)
T ss_pred chHH---hhhccc--cc--CCc--eee-----ccccCCcCceeeecCCceEEEecCCCcceeEEcccc
Confidence 2211 222211 11 211 111 012344566778888776655544444666666544
No 458
>KOG0650|consensus
Probab=82.66 E-value=80 Score=34.58 Aligned_cols=102 Identities=10% Similarity=0.214 Sum_probs=57.7
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
.....|..+|.+|+.+.. ..+ ...+++..+.... ...++......+.. ..|.|-..++++.+.
T Consensus 524 i~~vtWHrkGDYlatV~~----~~~------~~~VliHQLSK~~-----sQ~PF~kskG~vq~-v~FHPs~p~lfVaTq- 586 (733)
T KOG0650|consen 524 IRQVTWHRKGDYLATVMP----DSG------NKSVLIHQLSKRK-----SQSPFRKSKGLVQR-VKFHPSKPYLFVATQ- 586 (733)
T ss_pred cceeeeecCCceEEEecc----CCC------cceEEEEeccccc-----ccCchhhcCCceeE-EEecCCCceEEEEec-
Confidence 356789999999884433 344 5567777775433 01122222222222 567787666655543
Q ss_pred CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEE
Q psy463 379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLS 430 (790)
Q Consensus 379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~ 430 (790)
+.|.++++.. . .|+..++ ++-..+++.+++|.|..++..
T Consensus 587 -----~~vRiYdL~k--q---elvKkL~---tg~kwiS~msihp~GDnli~g 625 (733)
T KOG0650|consen 587 -----RSVRIYDLSK--Q---ELVKKLL---TGSKWISSMSIHPNGDNLILG 625 (733)
T ss_pred -----cceEEEehhH--H---HHHHHHh---cCCeeeeeeeecCCCCeEEEe
Confidence 3556666644 1 1221111 155678889999998877654
No 459
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=82.56 E-value=8.2 Score=38.36 Aligned_cols=111 Identities=15% Similarity=0.058 Sum_probs=50.2
Q ss_pred CCCccEEEEEcCCCCccccccccccchHHHHHh--cCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHH
Q psy463 498 HKKYPLLIHVYGGPSSFQVTERFSVDWNLYLAD--NKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQ 575 (790)
Q Consensus 498 ~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~--~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~ 575 (790)
....| ||+.||.+.+- ....+......+.. --|.-|.+++. |.+.. .+...... ..+.+..+.+...+
T Consensus 3 ~~~~P-vViwHGmGD~~--~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~-~D~~~s~f-----~~v~~Qv~~vc~~l 72 (279)
T PF02089_consen 3 PSPLP-VVIWHGMGDSC--CNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPS-EDVENSFF-----GNVNDQVEQVCEQL 72 (279)
T ss_dssp TSS---EEEE--TT--S----TTTHHHHHHHHHHHSTT--EEE--S-SSSHH-HHHHHHHH-----SHHHHHHHHHHHHH
T ss_pred CCCCc-EEEEEcCcccc--CChhHHHHHHHHHHHhCCCceEEEEEE-CCCcc-hhhhhhHH-----HHHHHHHHHHHHHH
Confidence 34455 55779976541 11122222222222 13767777765 32211 11111111 22455554444444
Q ss_pred HhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCCC
Q psy463 576 ENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAPV 619 (790)
Q Consensus 576 ~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~~ 619 (790)
+..+.+. .-+.++|+|.||.++=.++.+.+...++-.|..++.
T Consensus 73 ~~~p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 73 ANDPELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp HH-GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred hhChhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 4344332 469999999999999999999887678877776654
No 460
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=82.51 E-value=4 Score=37.68 Aligned_cols=53 Identities=19% Similarity=0.125 Sum_probs=33.1
Q ss_pred hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCC
Q psy463 564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAP 618 (790)
Q Consensus 564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~ 618 (790)
..++...++-|.... ....++.++|||||..++..++...+...-..++..+|
T Consensus 91 a~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 91 APRLARFLDGLRATH--GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 334444444444422 34569999999999999999887633323335555555
No 461
>PLN02310 triacylglycerol lipase
Probab=82.30 E-value=3.6 Score=43.21 Aligned_cols=39 Identities=15% Similarity=0.058 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHHhCCCcC-CCceEEEEechHHHHHHHHHh
Q psy463 565 YDQINVTRYLQENLPYID-KTRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 565 ~D~~~~~~~l~~~~~~~d-~~ri~i~G~S~GG~~a~~~a~ 603 (790)
+.+.+.++.+.+.++.-+ ..+|.|+|||+||.+|..++.
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 344555666655333212 248999999999999988774
No 462
>PLN02162 triacylglycerol lipase
Probab=82.19 E-value=2.1 Score=45.35 Aligned_cols=37 Identities=22% Similarity=0.166 Sum_probs=25.7
Q ss_pred hhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463 564 IYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 564 ~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~ 603 (790)
+..+.+.++.+.++.+ ..++.++|||+||.+|..++.
T Consensus 261 y~~I~~~L~~lL~k~p---~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNK---NLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCC---CceEEEEecChHHHHHHHHHH
Confidence 3445555555554333 468999999999999987654
No 463
>KOG1063|consensus
Probab=81.89 E-value=92 Score=34.76 Aligned_cols=123 Identities=17% Similarity=0.118 Sum_probs=62.8
Q ss_pred CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463 244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD 322 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~ 322 (790)
+.+..+..+.|+|++. ++..+... ...++.=+-++|-......-....+....+-.-.|+|++..|+ +. ...
T Consensus 265 GHeDWV~sv~W~p~~~~LLSASaDk--smiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii--~~---g~~ 337 (764)
T KOG1063|consen 265 GHEDWVYSVWWHPEGLDLLSASADK--SMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVII--AH---GRT 337 (764)
T ss_pred CcccceEEEEEccchhhheecccCc--ceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEE--Ee---ccc
Confidence 5567889999999996 44433322 1122332333343322222111111111133678999997554 33 256
Q ss_pred CCCCcCcccEEEEEEcCCCCcccCCCcccccCC-CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEE
Q psy463 323 GSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRG-RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYR 388 (790)
Q Consensus 323 g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 388 (790)
| --|+|. +-+.. +........| ...+.. +.|+|.|+.|.-.+.+.. .+|+.
T Consensus 338 G------g~hlWk-t~d~~----~w~~~~~iSGH~~~V~d-v~W~psGeflLsvs~DQT---TRlFa 389 (764)
T KOG1063|consen 338 G------GFHLWK-TKDKT----FWTQEPVISGHVDGVKD-VDWDPSGEFLLSVSLDQT---TRLFA 389 (764)
T ss_pred C------cEEEEe-ccCcc----ceeecccccccccccee-eeecCCCCEEEEeccccc---eeeec
Confidence 6 346666 11111 1112233333 345565 899999997666665533 55554
No 464
>KOG0269|consensus
Probab=81.10 E-value=24 Score=39.53 Aligned_cols=164 Identities=11% Similarity=0.129 Sum_probs=94.2
Q ss_pred CCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCC
Q psy463 245 VEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDG 323 (790)
Q Consensus 245 ~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g 323 (790)
....+..+.|++--- ++..-+++. -|-.+|+........+.... +..++..|||--...++... ..|
T Consensus 132 H~Rs~~~ldfh~tep~iliSGSQDg---~vK~~DlR~~~S~~t~~~nS-----ESiRDV~fsp~~~~~F~s~~----dsG 199 (839)
T KOG0269|consen 132 HERSANKLDFHSTEPNILISGSQDG---TVKCWDLRSKKSKSTFRSNS-----ESIRDVKFSPGYGNKFASIH----DSG 199 (839)
T ss_pred hccceeeeeeccCCccEEEecCCCc---eEEEEeeecccccccccccc-----hhhhceeeccCCCceEEEec----CCc
Confidence 445567778887665 444444433 25566666555444443321 12568999997544443443 456
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeee
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITC 403 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~ 403 (790)
-|-++|+.--. ....+++.+...+.- +.|+|++.+|+--+.+ +...||-+.- .+...+.+
T Consensus 200 --------~lqlWDlRqp~----r~~~k~~AH~GpV~c-~nwhPnr~~lATGGRD---K~vkiWd~t~----~~~~~~~t 259 (839)
T KOG0269|consen 200 --------YLQLWDLRQPD----RCEKKLTAHNGPVLC-LNWHPNREWLATGGRD---KMVKIWDMTD----SRAKPKHT 259 (839)
T ss_pred --------eEEEeeccCch----hHHHHhhcccCceEE-EeecCCCceeeecCCC---ccEEEEeccC----CCccceeE
Confidence 46677875322 124568877666655 8899987766554433 2366776643 22222211
Q ss_pred cccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463 404 DLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT 445 (790)
Q Consensus 404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~ 445 (790)
. . ....+..+.|-|+..+.+.+++-.+--.|+++|++
T Consensus 260 I-n----Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvr 296 (839)
T KOG0269|consen 260 I-N----TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVR 296 (839)
T ss_pred E-e----ecceeeeeeeccCccchhhhhhccccceEEEEeec
Confidence 0 0 12345567888988877777766666667777765
No 465
>PLN02324 triacylglycerol lipase
Probab=81.07 E-value=2.4 Score=44.47 Aligned_cols=38 Identities=18% Similarity=0.110 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463 565 YDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 565 ~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~ 603 (790)
+.+...++.+++.++. ..-+|.|+|||+||.+|..+|.
T Consensus 197 eqVl~eV~~L~~~Yp~-e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 197 EQVQGELKRLLELYKN-EEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHCCC-CCceEEEecCcHHHHHHHHHHH
Confidence 3445556666664542 1247999999999999988774
No 466
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=80.50 E-value=95 Score=34.03 Aligned_cols=70 Identities=17% Similarity=0.282 Sum_probs=45.5
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
....++||+.++++ +.- .+| .|.++|...+ ...++...... ..++|.|+|..+++.+.+
T Consensus 262 v~~ca~sp~E~kLv-lGC----~Dg--------SiiLyD~~~~-------~t~~~ka~~~P-~~iaWHp~gai~~V~s~q 320 (545)
T PF11768_consen 262 VICCARSPSEDKLV-LGC----EDG--------SIILYDTTRG-------VTLLAKAEFIP-TLIAWHPDGAIFVVGSEQ 320 (545)
T ss_pred ceEEecCcccceEE-EEe----cCC--------eEEEEEcCCC-------eeeeeeecccc-eEEEEcCCCcEEEEEcCC
Confidence 34678999999998 444 467 6888897654 33444444333 348999999866666555
Q ss_pred CCCceEEEEEEEcC
Q psy463 379 GSPIVQHMYRINIA 392 (790)
Q Consensus 379 ~~~~~~~l~~~~~~ 392 (790)
|. -++|-+.+.
T Consensus 321 Ge---lQ~FD~ALs 331 (545)
T PF11768_consen 321 GE---LQCFDMALS 331 (545)
T ss_pred ce---EEEEEeecC
Confidence 43 556655554
No 467
>KOG0299|consensus
Probab=80.19 E-value=84 Score=33.18 Aligned_cols=60 Identities=15% Similarity=-0.024 Sum_probs=33.8
Q ss_pred EeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463 363 LAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI 432 (790)
Q Consensus 363 ~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~ 432 (790)
++..|....++-.+..|. .+||.+.-.- .....|.. +. -.+.+.++.|+++|++++....
T Consensus 386 la~i~~sdL~asGS~~G~---vrLW~i~~g~--r~i~~l~~-ls----~~GfVNsl~f~~sgk~ivagiG 445 (479)
T KOG0299|consen 386 LAVIPGSDLLASGSWSGC---VRLWKIEDGL--RAINLLYS-LS----LVGFVNSLAFSNSGKRIVAGIG 445 (479)
T ss_pred eEecccCceEEecCCCCc---eEEEEecCCc--cccceeee-cc----cccEEEEEEEccCCCEEEEecc
Confidence 444555553333333343 7888886533 23333322 11 2356778899999998877643
No 468
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=80.08 E-value=0.35 Score=49.55 Aligned_cols=44 Identities=20% Similarity=0.311 Sum_probs=33.8
Q ss_pred hhhccccchhhhccCCcEEEEeecCCCccChhhHHHHHHHHHhc
Q psy463 646 YKIAALNNKVDRIRDKQYLLVHGTMDDNVHFQQSMMLAKSLQHA 689 (790)
Q Consensus 646 ~~~~~~~~~~~~~~~~p~l~~~g~~d~~v~~~~~~~l~~~l~~~ 689 (790)
+....+...+..+...|+|++||..|..|+...+..++......
T Consensus 218 ~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~ 261 (299)
T COG1073 218 LLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARER 261 (299)
T ss_pred hccCcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccC
Confidence 34444455566666579999999999999999999988876663
No 469
>KOG0292|consensus
Probab=80.02 E-value=1.2e+02 Score=35.03 Aligned_cols=246 Identities=13% Similarity=0.134 Sum_probs=0.0
Q ss_pred ceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCccCCc
Q psy463 81 NRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKV 160 (790)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~ 160 (790)
+..+++.++..+.+-..+............+...+++|--+.++..+ ....+.| .|+.+.-+...
T Consensus 338 kd~~i~~~d~~t~~d~~v~~lr~~g~~~~~~~smsYNpae~~vlics---~~~n~~y------~L~~ipk~~~~------ 402 (1202)
T KOG0292|consen 338 KDRFIRSYDLRTQKDTAVASLRRPGTLWQPPRSLSYNPAENAVLICS---NLDNGEY------ELVQIPKDSDG------ 402 (1202)
T ss_pred ccceEEeeeccccccceeEeccCCCcccCCcceeeeccccCeEEEEe---ccCCCeE------EEEEecCcccc------
Q ss_pred ceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhhccc
Q psy463 161 PVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDE 240 (790)
Q Consensus 161 ~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~ 240 (790)
....+......-.-.-|-.+++- .++.+.+ ..+-.-++.....++++.|....
T Consensus 403 ~~~~~~~~k~tG~~a~fvarNrf-avl~k~~------------~~v~ik~l~N~vtkkl~~~~~~~-------------- 455 (1202)
T KOG0292|consen 403 VSDGKDVKKGTGEGALFVARNRF-AVLDKSN------------EQVVIKNLKNKVTKKLLLPESTD-------------- 455 (1202)
T ss_pred cCCchhhhcCCCCceEEEEecce-EEEEecC------------cceEEecccchhhhcccCccccc--------------
Q ss_pred CCCCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccc
Q psy463 241 KENNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQE 320 (790)
Q Consensus 241 ~~~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~ 320 (790)
..-..-+|.++....+. +.++|+..+....-..... .....||+|+..++ +.+
T Consensus 456 ----------~IF~ag~g~lll~~~~~-----v~lfdvQq~~~~~si~~s~-------vkyvvws~dm~~vA-ll~---- 508 (1202)
T KOG0292|consen 456 ----------DIFYAGTGNLLLRSPDS-----VTLFDVQQKKKVGSIKVSK-------VKYVVWSNDMSRVA-LLS---- 508 (1202)
T ss_pred ----------ceeeccCccEEEEcCCe-----EEEEEeecceEEEEEecCc-------eeEEEEcCccchhh-hcc----
Q ss_pred cCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC-------CCC-----ceEEEEE
Q psy463 321 SDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ-------GSP-----IVQHMYR 388 (790)
Q Consensus 321 ~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~-------~~~-----~~~~l~~ 388 (790)
...|.+.+.+=. ...-......+.+ -+|+.+|-.||-+.+. |+. ....||.
T Consensus 509 ---------Kh~i~i~~kkL~-------l~~sihEtiriks-gawde~gVfiYtT~nHikYal~~GD~GIikTLd~~iyi 571 (1202)
T KOG0292|consen 509 ---------KHTITIADKKLE-------LLCSIHETIRIKS-GAWDEDGVFIYTTLNHIKYALENGDSGIIKTLDKPIYI 571 (1202)
T ss_pred ---------cceEEEEecchh-------heecchheeEeee-ceeccCceEEEEehhhhhhhhccCCcceEEecccceEE
Q ss_pred EEcCCCCCCcceeeecccccCCCcccEEEEEEec
Q psy463 389 INIADPTATPECITCDLLTSANQKCSYSGATFST 422 (790)
Q Consensus 389 ~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~ 422 (790)
..+.+ +.+-||-. .+....+.+.|
T Consensus 572 tkv~g--n~V~cl~r--------d~~~~~~~IDp 595 (1202)
T KOG0292|consen 572 TKVKG--NKVFCLNR--------DGEIECLTIDP 595 (1202)
T ss_pred EEeeC--CEEEEEec--------CCCeEEEeech
No 470
>KOG2541|consensus
Probab=79.72 E-value=18 Score=35.33 Aligned_cols=102 Identities=18% Similarity=0.182 Sum_probs=54.2
Q ss_pred ccEEEEEcCCCCccccccccccchHHHHHh-cCCeEEEEEcCCCCCCChhhhHhhhhccCCccchhHHHHHHHHHHHhCC
Q psy463 501 YPLLIHVYGGPSSFQVTERFSVDWNLYLAD-NKDIVVAYIDGRNSALKGNTLKYAGYRRLGTVEIYDQINVTRYLQENLP 579 (790)
Q Consensus 501 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~-~~G~~v~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 579 (790)
.| +|++||....- ......-..+++. --|..|.+.+. |.|. ...+. ..+.+..+.+.......+
T Consensus 24 ~P-~ii~HGigd~c---~~~~~~~~~q~l~~~~g~~v~~lei-g~g~-~~s~l---------~pl~~Qv~~~ce~v~~m~ 88 (296)
T KOG2541|consen 24 VP-VIVWHGIGDSC---SSLSMANLTQLLEELPGSPVYCLEI-GDGI-KDSSL---------MPLWEQVDVACEKVKQMP 88 (296)
T ss_pred CC-EEEEeccCccc---ccchHHHHHHHHHhCCCCeeEEEEe-cCCc-chhhh---------ccHHHHHHHHHHHHhcch
Confidence 45 55779976642 2222222223332 24777888775 3221 11111 123333333333222233
Q ss_pred CcCCCceEEEEechHHHHHHHHHhcCCCCceEEEEEeCC
Q psy463 580 YIDKTRTAIWGWSYGGYATGLALALDPSNVFKCGISVAP 618 (790)
Q Consensus 580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~~v~~~~ 618 (790)
.. .+-+.++|.|.||.++=.++.+-+...++-.|..++
T Consensus 89 ~l-sqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~g 126 (296)
T KOG2541|consen 89 EL-SQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGG 126 (296)
T ss_pred hc-cCceEEEEEccccHHHHHHHHhCCCCCcceeEeccC
Confidence 22 256899999999999988888776655665555543
No 471
>PLN02633 palmitoyl protein thioesterase family protein
Probab=79.59 E-value=16 Score=36.86 Aligned_cols=36 Identities=19% Similarity=0.027 Sum_probs=28.6
Q ss_pred CceEEEEechHHHHHHHHHhcCCC-CceEEEEEeCCC
Q psy463 584 TRTAIWGWSYGGYATGLALALDPS-NVFKCGISVAPV 619 (790)
Q Consensus 584 ~ri~i~G~S~GG~~a~~~a~~~p~-~~~~~~v~~~~~ 619 (790)
+-+.++|+|.||.++=.++.+.+. ..++-.|..++.
T Consensus 94 ~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 459999999999999999998876 457766666543
No 472
>KOG2041|consensus
Probab=79.58 E-value=1e+02 Score=34.50 Aligned_cols=258 Identities=14% Similarity=0.163 Sum_probs=0.0
Q ss_pred ccceeecCCceeE----eCCCCCceEEEEecCCceeEEEecccCCCCCCCcCCCccccCCCCccccccCCCcceeEeeee
Q psy463 2 FTEEVLSSSSALW----FSPSGNNLAYASFDDNRTVIMTIPFYGNPGHPSSQYTQAINLREPVLSRVNWANESVVAAWVN 77 (790)
Q Consensus 2 ~~~~~~~~~~~~~----wSPDG~~iaf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 77 (790)
|||=+..++-+.. |.-||++|+.+=.+.. +.+=..+|. ..-...+.-.....+.|
T Consensus 106 ~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGa---vIVGsvdGN-------RIwgKeLkg~~l~hv~w----------- 164 (1189)
T KOG2041|consen 106 CEEMINNRNKSVVVSMSWNLDGTKICIVYEDGA---VIVGSVDGN-------RIWGKELKGQLLAHVLW----------- 164 (1189)
T ss_pred HHHHhhCcCccEEEEEEEcCCCcEEEEEEccCC---EEEEeeccc-------eecchhcchheccceee-----------
Q ss_pred cccceeEEEEeeCCCCeeeEEEeecCCCCccccCCccccccCCceEEEEeecCCCCCCCCCCcCCcEEEEEEcCCcCCcc
Q psy463 78 RVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIK 157 (790)
Q Consensus 78 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~ 157 (790)
|+|.+.++|... .+.+.++|.++.-..+
T Consensus 165 ---------------------------------------s~D~~~~Lf~~a-------------nge~hlydnqgnF~~K 192 (1189)
T KOG2041|consen 165 ---------------------------------------SEDLEQALFKKA-------------NGETHLYDNQGNFERK 192 (1189)
T ss_pred ---------------------------------------cccHHHHHhhhc-------------CCcEEEecccccHHHh
Q ss_pred CCcceeccccceEEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccccCcCCccccccccceeehhh
Q psy463 158 DKVPVPLTRGRFTVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILA 237 (790)
Q Consensus 158 ~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~ 237 (790)
-.....++.. -.|... |..|.
T Consensus 193 l~~~c~Vn~t-----------------g~~s~~-------------------------------~~kia----------- 213 (1189)
T KOG2041|consen 193 LEKDCEVNGT-----------------GIFSNF-------------------------------PTKIA----------- 213 (1189)
T ss_pred hhhceEEeee-----------------eeecCC-------------------------------Ccccc-----------
Q ss_pred cccCCCCCCCEEEEEEEccCCc--EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEE
Q psy463 238 WDEKENNVEPVLSRVNWANESV--VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLIL 315 (790)
Q Consensus 238 ~~~~~~~~~~~~~~~~wspDg~--~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~ 315 (790)
....+......+|-.+ ++....++. +.++..+....-.+....-. .-...|+++|.-|+ +.
T Consensus 214 ------~i~w~~g~~~~v~pdrP~lavcy~nGr----~QiMR~eND~~Pvv~dtgm~------~vgakWnh~G~vLA-vc 276 (1189)
T KOG2041|consen 214 ------EIEWNTGPYQPVPPDRPRLAVCYANGR----MQIMRSENDPEPVVVDTGMK------IVGAKWNHNGAVLA-VC 276 (1189)
T ss_pred ------ceeeccCccccCCCCCCEEEEEEcCce----ehhhhhcCCCCCeEEecccE------eecceecCCCcEEE-Ec
Q ss_pred ccccccCCCCCcCccc-EEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCC
Q psy463 316 SHNQESDGSTPVDSWD-HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADP 394 (790)
Q Consensus 316 ~~~~~~~g~~~~~~~~-~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~ 394 (790)
..+.+..... .. .+..+..-|.- ...|......+.+ ++|--.|=+|+..... -||..++..
T Consensus 277 G~~~da~~~~----d~n~v~Fysp~G~i------~gtlkvpg~~It~-lsWEg~gLriA~Avds------fiyfanIRP- 338 (1189)
T KOG2041|consen 277 GNDSDADEPT----DSNKVHFYSPYGHI------VGTLKVPGSCITG-LSWEGTGLRIAIAVDS------FIYFANIRP- 338 (1189)
T ss_pred cCcccccCcc----ccceEEEeccchhh------eEEEecCCceeee-eEEcCCceEEEEEecc------eEEEEeecc-
Q ss_pred CCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCe--EEEEecCCCe
Q psy463 395 TATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPE--IMLFDKTGQR 448 (790)
Q Consensus 395 ~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~--i~~~~~~~~~ 448 (790)
...|..-.+.+||.+.++..|+ |..+|..+.+
T Consensus 339 ----------------------~ykWgy~e~TvVy~y~~~e~p~y~i~Fwdtk~ne 372 (1189)
T KOG2041|consen 339 ----------------------EYKWGYIEETVVYVYQKEELPQYGIMFWDTKTNE 372 (1189)
T ss_pred ----------------------cceEEEeeeEEEEEEccCCCcceEEEEEecccCh
No 473
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=79.49 E-value=99 Score=33.59 Aligned_cols=70 Identities=13% Similarity=0.102 Sum_probs=38.4
Q ss_pred CCCEEEEEEEccCC----c----EEEEEeccC-----cceEEEEEECCCC-----ceeEEEEEeCCCcccccCCceeEcc
Q psy463 245 VEPVLSRVNWANES----V----VAAWVNRVQ-----NRARITRCSINEG-----TCDVVFSRDLDRGWFEPFDHLRFSS 306 (790)
Q Consensus 245 ~~~~~~~~~wspDg----~----~~~~~~r~~-----~~~~i~~~~~~~g-----~~~~l~~~~~~~~~~~~~~~~~~sp 306 (790)
....+..++++||- + +++++.... ....|.++.++.. ..+.|+....... .+.-+.+.|.|
T Consensus 77 ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~-~H~GgrI~FgP 155 (454)
T TIGR03606 77 QHNGLLGLALHPDFMQEKGNPYVYISYTYKNGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGN-DHNGGRLVFGP 155 (454)
T ss_pred CCCceeeEEECCCccccCCCcEEEEEEeccCCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCC-CcCCceEEECC
Confidence 35667788899884 1 444443321 2456777766421 1234443221111 12245789999
Q ss_pred CCCEEEEEEc
Q psy463 307 DGKKMLLILS 316 (790)
Q Consensus 307 Dg~~i~~~~~ 316 (790)
||+ |++...
T Consensus 156 DG~-LYVs~G 164 (454)
T TIGR03606 156 DGK-IYYTIG 164 (454)
T ss_pred CCc-EEEEEC
Confidence 997 776665
No 474
>KOG0283|consensus
Probab=79.46 E-value=1.2e+02 Score=34.53 Aligned_cols=104 Identities=13% Similarity=0.231 Sum_probs=65.1
Q ss_pred CCEEEEEEEccCCcEEEEE-eccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCC
Q psy463 246 EPVLSRVNWANESVVAAWV-NRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGS 324 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~-~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~ 324 (790)
..-+-.++||.++-++..+ ++. +-+..+...+|-.++.... .+..++|.|-...+++..+ -+|
T Consensus 369 t~DILDlSWSKn~fLLSSSMDKT-----VRLWh~~~~~CL~~F~Hnd------fVTcVaFnPvDDryFiSGS----LD~- 432 (712)
T KOG0283|consen 369 TADILDLSWSKNNFLLSSSMDKT-----VRLWHPGRKECLKVFSHND------FVTCVAFNPVDDRYFISGS----LDG- 432 (712)
T ss_pred chhheecccccCCeeEecccccc-----EEeecCCCcceeeEEecCC------eeEEEEecccCCCcEeecc----ccc-
Confidence 3446789999999855443 332 6677777888888877531 2568999997777765666 566
Q ss_pred CCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCC
Q psy463 325 TPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQG 379 (790)
Q Consensus 325 ~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~ 379 (790)
.+-++++...+ +...+.-. ++...+.+.|||+..++-+-.|
T Consensus 433 -------KvRiWsI~d~~------Vv~W~Dl~-~lITAvcy~PdGk~avIGt~~G 473 (712)
T KOG0283|consen 433 -------KVRLWSISDKK------VVDWNDLR-DLITAVCYSPDGKGAVIGTFNG 473 (712)
T ss_pred -------ceEEeecCcCe------eEeehhhh-hhheeEEeccCCceEEEEEecc
Confidence 45555554443 32222222 2223478999998776655543
No 475
>PLN02802 triacylglycerol lipase
Probab=79.31 E-value=2.9 Score=44.92 Aligned_cols=38 Identities=18% Similarity=0.143 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHh
Q psy463 565 YDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 565 ~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~ 603 (790)
+++.+.++.+.+.++. ..-+|.|+|||+||.+|..++.
T Consensus 312 eqVl~eV~~Ll~~Y~~-e~~sI~VTGHSLGGALAtLaA~ 349 (509)
T PLN02802 312 ESVVGEVRRLMEKYKG-EELSITVTGHSLGAALALLVAD 349 (509)
T ss_pred HHHHHHHHHHHHhCCC-CcceEEEeccchHHHHHHHHHH
Confidence 4555666666654431 1247999999999999987765
No 476
>KOG0270|consensus
Probab=79.29 E-value=68 Score=33.65 Aligned_cols=141 Identities=19% Similarity=0.285 Sum_probs=81.6
Q ss_pred EEEEccCCc-EEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCCCcCc
Q psy463 251 RVNWANESV-VAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGSTPVDS 329 (790)
Q Consensus 251 ~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~ 329 (790)
.++|-.+-+ +++..+-+. .+.+.|+++|+|...+...+. ......|.|....+.++.+ .++
T Consensus 248 ~Ls~n~~~~nVLaSgsaD~---TV~lWD~~~g~p~~s~~~~~k-----~Vq~l~wh~~~p~~LLsGs----~D~------ 309 (463)
T KOG0270|consen 248 ALSWNRNFRNVLASGSADK---TVKLWDVDTGKPKSSITHHGK-----KVQTLEWHPYEPSVLLSGS----YDG------ 309 (463)
T ss_pred HHHhccccceeEEecCCCc---eEEEEEcCCCCcceehhhcCC-----ceeEEEecCCCceEEEecc----ccc------
Confidence 455655555 554443332 399999999999877764332 2568899998887775554 455
Q ss_pred ccEEEEEEcCC-CCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCc-ceeeecccc
Q psy463 330 WDHLTFIDLDD-QAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATP-ECITCDLLT 407 (790)
Q Consensus 330 ~~~l~~~d~~~-~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~-~~lt~~~~~ 407 (790)
.+.+.|... +.. ....-..+ ++. .+.|+|-....+|.+.+. ..||-.++... +++ ..+-.
T Consensus 310 --~V~l~D~R~~~~s----~~~wk~~g--~VE-kv~w~~~se~~f~~~tdd----G~v~~~D~R~~-~~~vwt~~A---- 371 (463)
T KOG0270|consen 310 --TVALKDCRDPSNS----GKEWKFDG--EVE-KVAWDPHSENSFFVSTDD----GTVYYFDIRNP-GKPVWTLKA---- 371 (463)
T ss_pred --eEEeeeccCcccc----CceEEecc--ceE-EEEecCCCceeEEEecCC----ceEEeeecCCC-CCceeEEEe----
Confidence 566777642 110 01111111 233 378999887777777653 46777777542 221 11111
Q ss_pred cCCCcccEEEEEEecCCcEEEEE
Q psy463 408 SANQKCSYSGATFSTNVSYYVLS 430 (790)
Q Consensus 408 ~~~~~~~~~~~~~s~dg~~~~~~ 430 (790)
+...++.++++..-..++.+
T Consensus 372 ---Hd~~ISgl~~n~~~p~~l~t 391 (463)
T KOG0270|consen 372 ---HDDEISGLSVNIQTPGLLST 391 (463)
T ss_pred ---ccCCcceEEecCCCCcceee
Confidence 44567777777665555444
No 477
>KOG0303|consensus
Probab=78.83 E-value=71 Score=33.01 Aligned_cols=71 Identities=7% Similarity=0.116 Sum_probs=47.4
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
.+...|.|--..+.++++ + -..+.++++.+|+ ....|. +...+.+ .+|+.||..+.-+..+
T Consensus 134 Vg~V~wHPtA~NVLlsag------~------Dn~v~iWnv~tge-----ali~l~-hpd~i~S-~sfn~dGs~l~TtckD 194 (472)
T KOG0303|consen 134 VGLVQWHPTAPNVLLSAG------S------DNTVSIWNVGTGE-----ALITLD-HPDMVYS-MSFNRDGSLLCTTCKD 194 (472)
T ss_pred EEEEeecccchhhHhhcc------C------CceEEEEeccCCc-----eeeecC-CCCeEEE-EEeccCCceeeeeccc
Confidence 567899998877764433 3 3478999999887 244455 4444444 7899999977666555
Q ss_pred CCCceEEEEEEEcCC
Q psy463 379 GSPIVQHMYRINIAD 393 (790)
Q Consensus 379 ~~~~~~~l~~~~~~~ 393 (790)
..|.+++...
T Consensus 195 -----KkvRv~dpr~ 204 (472)
T KOG0303|consen 195 -----KKVRVIDPRR 204 (472)
T ss_pred -----ceeEEEcCCC
Confidence 5666666543
No 478
>KOG1283|consensus
Probab=78.67 E-value=12 Score=37.28 Aligned_cols=136 Identities=15% Similarity=0.133 Sum_probs=80.3
Q ss_pred cCCCcEEEEEEEeCCCCCCCCCCCccEEEEEcCCCCccccccccccchHH-------------HHHhcCCeEEEEEcCC-
Q psy463 477 IQPNMEAQVKLFLPPGIDTSGHKKYPLLIHVYGGPSSFQVTERFSVDWNL-------------YLADNKDIVVAYIDGR- 542 (790)
Q Consensus 477 ~~dg~~i~~~~~~P~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~-------------~~~~~~G~~v~~~d~r- 542 (790)
.+++....+++|...... ....|+.+.+.|+|+.... .|. .|.. ..+ +...++.+|.+
T Consensus 10 vr~~a~~F~wly~~~~~~---ks~~pl~lwlqGgpGaSst--G~G-NFeE~GPl~~~~~~r~~TWl--k~adllfvDnPV 81 (414)
T KOG1283|consen 10 VRTGAHMFWWLYYATANV---KSERPLALWLQGGPGASST--GFG-NFEELGPLDLDGSPRDWTWL--KDADLLFVDNPV 81 (414)
T ss_pred eecCceEEEEEeeecccc---ccCCCeeEEecCCCCCCCc--Ccc-chhhcCCcccCCCcCCchhh--hhccEEEecCCC
Confidence 346777888888765422 3567999999999997432 221 1110 112 23456777766
Q ss_pred CCCCChhhhHh--hhhccCCccchhHHHHHHHHHHHhCCCcCCCceEEEEechHHHHHHHHHhcC------C--CCceEE
Q psy463 543 NSALKGNTLKY--AGYRRLGTVEIYDQINVTRYLQENLPYIDKTRTAIWGWSYGGYATGLALALD------P--SNVFKC 612 (790)
Q Consensus 543 G~~~~g~~~~~--~~~~~~~~~~~~D~~~~~~~l~~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~------p--~~~~~~ 612 (790)
|+|. ++-+ ..+-.-..+...|+...++-+....+.....+..|+-.|+||-+|..++..- . ...|.+
T Consensus 82 GaGf---SyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~ 158 (414)
T KOG1283|consen 82 GAGF---SYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIG 158 (414)
T ss_pred cCce---eeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeeccee
Confidence 4432 1111 1111111234567767666666656777788999999999999987765421 1 124667
Q ss_pred EEEeCCCCCcc
Q psy463 613 GISVAPVTDWI 623 (790)
Q Consensus 613 ~v~~~~~~~~~ 623 (790)
++++.+++...
T Consensus 159 VaLGDSWISP~ 169 (414)
T KOG1283|consen 159 VALGDSWISPE 169 (414)
T ss_pred EEccCcccChh
Confidence 77777765543
No 479
>KOG2111|consensus
Probab=78.34 E-value=40 Score=33.72 Aligned_cols=97 Identities=15% Similarity=0.175 Sum_probs=59.0
Q ss_pred EEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCC
Q psy463 332 HLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQ 411 (790)
Q Consensus 332 ~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~ 411 (790)
+|-++|+...+.- .+..+..++..+.- ++.+-+|..|+-.+..| .-|.+.+..++ .....+-.+. .
T Consensus 160 qvQi~dL~~~~~~---~p~~I~AH~s~Iac-v~Ln~~Gt~vATaStkG----TLIRIFdt~~g-~~l~E~RRG~-----d 225 (346)
T KOG2111|consen 160 QVQIVDLASTKPN---APSIINAHDSDIAC-VALNLQGTLVATASTKG----TLIRIFDTEDG-TLLQELRRGV-----D 225 (346)
T ss_pred eEEEEEhhhcCcC---CceEEEcccCceeE-EEEcCCccEEEEeccCc----EEEEEEEcCCC-cEeeeeecCC-----c
Confidence 7888888765400 02445555555544 67888998777666664 34445566552 2233343321 3
Q ss_pred cccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463 412 KCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT 445 (790)
Q Consensus 412 ~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~ 445 (790)
...++..+||||+++++.+.+-.+ +.++.+.
T Consensus 226 ~A~iy~iaFSp~~s~LavsSdKgT---lHiF~l~ 256 (346)
T KOG2111|consen 226 RADIYCIAFSPNSSWLAVSSDKGT---LHIFSLR 256 (346)
T ss_pred hheEEEEEeCCCccEEEEEcCCCe---EEEEEee
Confidence 557889999999999988765544 5555443
No 480
>KOG4328|consensus
Probab=78.04 E-value=65 Score=33.96 Aligned_cols=160 Identities=11% Similarity=0.168 Sum_probs=94.5
Q ss_pred CCEEEEEEEccCCc--EEEEEeccCcceEEEEEECCCCce----eEEEEEeCCCcccccCCceeEccCCCEEEEEEcccc
Q psy463 246 EPVLSRVNWANESV--VAAWVNRVQNRARITRCSINEGTC----DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQ 319 (790)
Q Consensus 246 ~~~~~~~~wspDg~--~~~~~~r~~~~~~i~~~~~~~g~~----~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~ 319 (790)
.+.++.+.|.|--. +++.-+..+ +|-++++.+.+. ..++... -.++....|+|....-++..+
T Consensus 186 ~~Rit~l~fHPt~~~~lva~GdK~G---~VG~Wn~~~~~~d~d~v~~f~~h-----s~~Vs~l~F~P~n~s~i~ssS--- 254 (498)
T KOG4328|consen 186 DRRITSLAFHPTENRKLVAVGDKGG---QVGLWNFGTQEKDKDGVYLFTPH-----SGPVSGLKFSPANTSQIYSSS--- 254 (498)
T ss_pred ccceEEEEecccCcceEEEEccCCC---cEEEEecCCCCCccCceEEeccC-----CccccceEecCCChhheeeec---
Confidence 56678899999765 555544332 388888854322 1222211 123678999998776554665
Q ss_pred ccCCCCCcCcccEEEEEEcCCCCcccCCCcc-cccCC-CeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC
Q psy463 320 ESDGSTPVDSWDHLTFIDLDDQAGIKDKVPV-PLTRG-RFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT 397 (790)
Q Consensus 320 ~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~-~lt~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 397 (790)
-+| .|-..|++++. .. .++.. ++.......++.+...++|..+.|. .+++-....+ .+
T Consensus 255 -yDG--------tiR~~D~~~~i------~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~---f~~iD~R~~~--s~ 314 (498)
T KOG4328|consen 255 -YDG--------TIRLQDFEGNI------SEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGN---FNVIDLRTDG--SE 314 (498)
T ss_pred -cCc--------eeeeeeecchh------hHHHhhcCccceeeeeccccCCCccEEEeecccc---eEEEEeecCC--cc
Confidence 577 57888988765 32 33331 2212223677788888888877763 6666666655 33
Q ss_pred cceeeecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEecC
Q psy463 398 PECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFDKT 445 (790)
Q Consensus 398 ~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~~~ 445 (790)
...+.- ..--+.++.+.|-..++..+++-... ..++|+.
T Consensus 315 ~~~~~l-------h~kKI~sv~~NP~~p~~laT~s~D~T--~kIWD~R 353 (498)
T KOG4328|consen 315 YENLRL-------HKKKITSVALNPVCPWFLATASLDQT--AKIWDLR 353 (498)
T ss_pred chhhhh-------hhcccceeecCCCCchheeecccCcc--eeeeehh
Confidence 333332 22256778889988877776544432 3344543
No 481
>KOG2321|consensus
Probab=77.89 E-value=1.1e+02 Score=33.36 Aligned_cols=113 Identities=12% Similarity=0.184 Sum_probs=58.9
Q ss_pred CEEEEEEEccCCcEEEE-EeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccC--CCEEEEEEccccccCC
Q psy463 247 PVLSRVNWANESVVAAW-VNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSD--GKKMLLILSHNQESDG 323 (790)
Q Consensus 247 ~~~~~~~wspDg~~~~~-~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spD--g~~i~~~~~~~~~~~g 323 (790)
..++.+.|+.||--++. ++.+. ++++|+.+.++-.+-.... .-+.-.+.|.+. ++.++ +.-
T Consensus 229 ~svTal~F~d~gL~~aVGts~G~----v~iyDLRa~~pl~~kdh~~----e~pi~~l~~~~~~~q~~v~-S~D------- 292 (703)
T KOG2321|consen 229 PSVTALKFRDDGLHVAVGTSTGS----VLIYDLRASKPLLVKDHGY----ELPIKKLDWQDTDQQNKVV-SMD------- 292 (703)
T ss_pred CcceEEEecCCceeEEeeccCCc----EEEEEcccCCceeecccCC----ccceeeecccccCCCceEE-ecc-------
Confidence 34678899988874433 34343 9999998776544433221 111234566444 33333 221
Q ss_pred CCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEc
Q psy463 324 STPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINI 391 (790)
Q Consensus 324 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 391 (790)
..-+-+||-.+|+. ...+.. ..++.. +..-|++. ++|.++...+ .+.|.+..
T Consensus 293 ------k~~~kiWd~~~Gk~-----~asiEp-t~~lND-~C~~p~sG-m~f~Ane~~~--m~~yyiP~ 344 (703)
T KOG2321|consen 293 ------KRILKIWDECTGKP-----MASIEP-TSDLND-FCFVPGSG-MFFTANESSK--MHTYYIPS 344 (703)
T ss_pred ------hHHhhhcccccCCc-----eeeccc-cCCcCc-eeeecCCc-eEEEecCCCc--ceeEEccc
Confidence 12355667666661 222221 112233 55667766 7788887544 45555543
No 482
>PLN02606 palmitoyl-protein thioesterase
Probab=77.62 E-value=17 Score=36.63 Aligned_cols=36 Identities=11% Similarity=-0.077 Sum_probs=28.3
Q ss_pred CceEEEEechHHHHHHHHHhcCCC-CceEEEEEeCCC
Q psy463 584 TRTAIWGWSYGGYATGLALALDPS-NVFKCGISVAPV 619 (790)
Q Consensus 584 ~ri~i~G~S~GG~~a~~~a~~~p~-~~~~~~v~~~~~ 619 (790)
+-+-++|+|.||.++=.++.+.|. ..++-.|..++.
T Consensus 95 ~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 468999999999999999998876 456666655543
No 483
>KOG1520|consensus
Probab=77.54 E-value=42 Score=34.77 Aligned_cols=105 Identities=15% Similarity=0.182 Sum_probs=58.4
Q ss_pred ceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEE----eEEEeeecCCCEEEEEE
Q psy463 301 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTV----TEILAWDEKENNVYFLS 376 (790)
Q Consensus 301 ~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~----~~~~~~s~dg~~l~~~~ 376 (790)
..+|...|..+++ + +. +--|+.++.+++. .+.++...... ...+..++ ...|||+.
T Consensus 119 Gl~f~~~ggdL~V-a------DA------YlGL~~V~p~g~~------a~~l~~~~~G~~~kf~N~ldI~~-~g~vyFTD 178 (376)
T KOG1520|consen 119 GIRFDKKGGDLYV-A------DA------YLGLLKVGPEGGL------AELLADEAEGKPFKFLNDLDIDP-EGVVYFTD 178 (376)
T ss_pred eEEeccCCCeEEE-E------ec------ceeeEEECCCCCc------ceeccccccCeeeeecCceeEcC-CCeEEEec
Confidence 5788888877773 3 22 4568899988876 55555432111 12245566 34577765
Q ss_pred cCCCC-------------ceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEeecC
Q psy463 377 TQGSP-------------IVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCIGP 434 (790)
Q Consensus 377 ~~~~~-------------~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~ 434 (790)
..... ...+|+++|..+ ...+.|-. +..-...+++|||++++++.....
T Consensus 179 SSsk~~~rd~~~a~l~g~~~GRl~~YD~~t--K~~~VLld-------~L~F~NGlaLS~d~sfvl~~Et~~ 240 (376)
T KOG1520|consen 179 SSSKYDRRDFVFAALEGDPTGRLFRYDPST--KVTKVLLD-------GLYFPNGLALSPDGSFVLVAETTT 240 (376)
T ss_pred cccccchhheEEeeecCCCccceEEecCcc--cchhhhhh-------cccccccccCCCCCCEEEEEeecc
Confidence 44110 113355555443 23333332 223344589999999988875444
No 484
>PLN02719 triacylglycerol lipase
Probab=77.35 E-value=3.7 Score=44.18 Aligned_cols=39 Identities=18% Similarity=0.148 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHHhCCCc--CCCceEEEEechHHHHHHHHHh
Q psy463 565 YDQINVTRYLQENLPYI--DKTRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 565 ~D~~~~~~~l~~~~~~~--d~~ri~i~G~S~GG~~a~~~a~ 603 (790)
+++...++.+.+.++.. ..-+|.|+|||+||.+|..+|.
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 45556666666645421 2248999999999999988764
No 485
>KOG1963|consensus
Probab=76.89 E-value=73 Score=36.43 Aligned_cols=101 Identities=10% Similarity=0.065 Sum_probs=57.5
Q ss_pred ceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCC--CCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 301 HLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDD--QAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 301 ~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~--~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
-.++||.++.++ ++ +.+| +|.++.--+ ++. -..+.|--+-.++.. ++|++||.+||-.+..
T Consensus 210 ~~~~spn~~~~A--a~---d~dG--------rI~vw~d~~~~~~~---~t~t~lHWH~~~V~~-L~fS~~G~~LlSGG~E 272 (792)
T KOG1963|consen 210 CVALSPNERYLA--AG---DSDG--------RILVWRDFGSSDDS---ETCTLLHWHHDEVNS-LSFSSDGAYLLSGGRE 272 (792)
T ss_pred eEEeccccceEE--Ee---ccCC--------cEEEEecccccccc---ccceEEEecccccce-eEEecCCceEeecccc
Confidence 478999999887 33 4568 355554322 220 001112112223444 8899999876544333
Q ss_pred CCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCCcEEEEEee
Q psy463 379 GSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNVSYYVLSCI 432 (790)
Q Consensus 379 ~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~ 432 (790)
..|.+-.+++ ++.+-|.. -...+-...+|||+...+..+.
T Consensus 273 -----~VLv~Wq~~T--~~kqfLPR-------Lgs~I~~i~vS~ds~~~sl~~~ 312 (792)
T KOG1963|consen 273 -----GVLVLWQLET--GKKQFLPR-------LGSPILHIVVSPDSDLYSLVLE 312 (792)
T ss_pred -----eEEEEEeecC--CCcccccc-------cCCeeEEEEEcCCCCeEEEEec
Confidence 4555555655 44444443 2346677889999988777654
No 486
>PLN02761 lipase class 3 family protein
Probab=76.80 E-value=3.8 Score=44.21 Aligned_cols=39 Identities=13% Similarity=0.028 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHHhCCC---cCCCceEEEEechHHHHHHHHHh
Q psy463 565 YDQINVTRYLQENLPY---IDKTRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 565 ~D~~~~~~~l~~~~~~---~d~~ri~i~G~S~GG~~a~~~a~ 603 (790)
+++...++.+.+.++. -..-+|.|+|||+||.+|..+|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 4556667777664431 12248999999999999987764
No 487
>KOG1034|consensus
Probab=76.67 E-value=89 Score=31.55 Aligned_cols=146 Identities=14% Similarity=0.180 Sum_probs=79.6
Q ss_pred CcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCE---EEEEEccccccCCCCCcCcccEEEEEEcCCCCcc
Q psy463 268 QNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKK---MLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGI 344 (790)
Q Consensus 268 ~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~---i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~ 344 (790)
.+...||-|..+++.+-.-...+ ..-.+.....+|+-|-.. +. .+. .. .-.|+++|+..++
T Consensus 63 ~~rvtiy~c~~d~~ir~lq~y~D--~d~~Esfytcsw~yd~~~~~p~l-a~~---G~--------~GvIrVid~~~~~-- 126 (385)
T KOG1034|consen 63 GNRVTIYECPGDGGIRLLQSYAD--EDHDESFYTCSWSYDSNTGNPFL-AAG---GY--------LGVIRVIDVVSGQ-- 126 (385)
T ss_pred CcEEEEEEECCccceeeeeeccC--CCCCcceEEEEEEecCCCCCeeE-Eee---cc--------eeEEEEEecchhh--
Confidence 34555888877664332111111 111122346788776542 22 222 12 3489999998776
Q ss_pred cCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCCcceeeecccccCCCcccEEEEEEecCC
Q psy463 345 KDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTATPECITCDLLTSANQKCSYSGATFSTNV 424 (790)
Q Consensus 345 ~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~s~dg 424 (790)
....+..+.+.+.. +.+-|+.-.++..+...+. .+||-+. + ..|+.- +....+....+-++.||+||
T Consensus 127 ---~~~~~~ghG~sINe-ik~~p~~~qlvls~SkD~s--vRlwnI~--~----~~Cv~V-fGG~egHrdeVLSvD~~~~g 193 (385)
T KOG1034|consen 127 ---CSKNYRGHGGSINE-IKFHPDRPQLVLSASKDHS--VRLWNIQ--T----DVCVAV-FGGVEGHRDEVLSVDFSLDG 193 (385)
T ss_pred ---hccceeccCccchh-hhcCCCCCcEEEEecCCce--EEEEecc--C----CeEEEE-ecccccccCcEEEEEEcCCC
Confidence 24455555555544 6778888778777766431 4555443 2 224332 22234466788899999999
Q ss_pred cEEEEEeecCCCCeEEEEecC
Q psy463 425 SYYVLSCIGPGIPEIMLFDKT 445 (790)
Q Consensus 425 ~~~~~~~~~~~~~~i~~~~~~ 445 (790)
.+|+-. +.+ -.|.+.++.
T Consensus 194 d~i~Sc--GmD-hslk~W~l~ 211 (385)
T KOG1034|consen 194 DRIASC--GMD-HSLKLWRLN 211 (385)
T ss_pred Ceeecc--CCc-ceEEEEecC
Confidence 976432 222 335555544
No 488
>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=76.64 E-value=1.7 Score=35.62 Aligned_cols=16 Identities=31% Similarity=0.472 Sum_probs=13.1
Q ss_pred eeEeCCCCCceEEEEe
Q psy463 12 ALWFSPSGNNLAYASF 27 (790)
Q Consensus 12 ~~~wSPDG~~iaf~~~ 27 (790)
.-.|||||++|.|+=.
T Consensus 72 vHvfSpDG~~lSFTYN 87 (122)
T PF12566_consen 72 VHVFSPDGSWLSFTYN 87 (122)
T ss_pred ceEECCCCCEEEEEec
Confidence 4569999999999744
No 489
>PLN02753 triacylglycerol lipase
Probab=76.22 E-value=4.2 Score=43.93 Aligned_cols=40 Identities=18% Similarity=0.067 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHHHhCCCc--CCCceEEEEechHHHHHHHHHh
Q psy463 564 IYDQINVTRYLQENLPYI--DKTRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 564 ~~D~~~~~~~l~~~~~~~--d~~ri~i~G~S~GG~~a~~~a~ 603 (790)
.+.+...++.+.+.++.- ...+|.|+|||+||.+|..+|.
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 345566677666644421 1358999999999999988774
No 490
>PLN03037 lipase class 3 family protein; Provisional
Probab=75.91 E-value=4.1 Score=43.90 Aligned_cols=38 Identities=18% Similarity=0.143 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhCCCc-CCCceEEEEechHHHHHHHHHh
Q psy463 566 DQINVTRYLQENLPYI-DKTRTAIWGWSYGGYATGLALA 603 (790)
Q Consensus 566 D~~~~~~~l~~~~~~~-d~~ri~i~G~S~GG~~a~~~a~ 603 (790)
.+.+.+..+.+.++.. ...+|.|+|||+||.+|...|.
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHH
Confidence 3444455555433321 1347999999999999988774
No 491
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=75.29 E-value=1.3e+02 Score=32.74 Aligned_cols=29 Identities=21% Similarity=0.285 Sum_probs=17.6
Q ss_pred EEEEEEccCCcEEEEEeccCcceEEEEEECCCC
Q psy463 249 LSRVNWANESVVAAWVNRVQNRARITRCSINEG 281 (790)
Q Consensus 249 ~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g 281 (790)
+..+.||+||++++...... +++++-+..
T Consensus 147 vk~V~Ws~~g~~val~t~~~----i~il~~~~~ 175 (443)
T PF04053_consen 147 VKYVIWSDDGELVALVTKDS----IYILKYNLE 175 (443)
T ss_dssp -EEEEE-TTSSEEEEE-S-S----EEEEEE-HH
T ss_pred CcEEEEECCCCEEEEEeCCe----EEEEEecch
Confidence 56899999999777765544 777665433
No 492
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.11 E-value=53 Score=32.75 Aligned_cols=120 Identities=8% Similarity=0.146 Sum_probs=65.7
Q ss_pred CCceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 299 FDHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 299 ~~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
.++..|+||.+.|+ .+. ++ ..+|.-++.+|.- .+.+.-..+.....+.|.-+|. |..+..
T Consensus 88 vS~LTynp~~rtLF-av~---n~--------p~~iVElt~~Gdl------irtiPL~g~~DpE~Ieyig~n~--fvi~dE 147 (316)
T COG3204 88 VSSLTYNPDTRTLF-AVT---NK--------PAAIVELTKEGDL------IRTIPLTGFSDPETIEYIGGNQ--FVIVDE 147 (316)
T ss_pred ccceeeCCCcceEE-Eec---CC--------CceEEEEecCCce------EEEecccccCChhHeEEecCCE--EEEEeh
Confidence 45799999999987 444 12 2467777766543 4433322221122256666654 333333
Q ss_pred CCCceEEEEEEEcCCCCCCcceee---ecccccCCCcccEEEEEEecCCcEEEEEeecCCCCeEEEEe
Q psy463 379 GSPIVQHMYRINIADPTATPECIT---CDLLTSANQKCSYSGATFSTNVSYYVLSCIGPGIPEIMLFD 443 (790)
Q Consensus 379 ~~~~~~~l~~~~~~~~~~~~~~lt---~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~~~~~i~~~~ 443 (790)
.. +.||.+.++.. .....+- -.+......++++...+|+|..+.+.+.. ..+|-.||.++
T Consensus 148 R~---~~l~~~~vd~~-t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aK-Er~P~~I~~~~ 210 (316)
T COG3204 148 RD---RALYLFTVDAD-TTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAK-ERNPIGIFEVT 210 (316)
T ss_pred hc---ceEEEEEEcCC-ccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEE-ccCCcEEEEEe
Confidence 22 67777766542 1111110 00111222478999999999988876653 33456677765
No 493
>KOG0302|consensus
Probab=74.15 E-value=75 Score=32.65 Aligned_cols=125 Identities=14% Similarity=0.217 Sum_probs=66.4
Q ss_pred CCCCEEEEEEEccCCc-EEEEEeccCcceEEEEEECCCCce-eEEEEEeCCCcccccCCceeEccCCCEEEEEEcccccc
Q psy463 244 NVEPVLSRVNWANESV-VAAWVNRVQNRARITRCSINEGTC-DVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQES 321 (790)
Q Consensus 244 ~~~~~~~~~~wspDg~-~~~~~~r~~~~~~i~~~~~~~g~~-~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~ 321 (790)
.....+..++|||.-+ .++..+-+. . |-+.|...+.. ..++...- .+ -..-++|+.+-..|+ +.. .
T Consensus 255 gH~~SVEDLqWSptE~~vfaScS~Dg-s--IrIWDiRs~~~~~~~~~kAh-~s---DVNVISWnr~~~lLa-sG~----D 322 (440)
T KOG0302|consen 255 GHTKSVEDLQWSPTEDGVFASCSCDG-S--IRIWDIRSGPKKAAVSTKAH-NS---DVNVISWNRREPLLA-SGG----D 322 (440)
T ss_pred ccccchhhhccCCccCceEEeeecCc-e--EEEEEecCCCccceeEeecc-CC---ceeeEEccCCcceee-ecC----C
Confidence 4556677899999988 443333222 1 66666666522 22322211 11 144688988877333 333 5
Q ss_pred CCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCC
Q psy463 322 DGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 322 ~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
+| .+-++|+..=+. ...+...+.+...+.. +.|+|....++..+...+ +..||-+.++.
T Consensus 323 dG--------t~~iwDLR~~~~--~~pVA~fk~Hk~pIts-ieW~p~e~s~iaasg~D~--QitiWDlsvE~ 381 (440)
T KOG0302|consen 323 DG--------TLSIWDLRQFKS--GQPVATFKYHKAPITS-IEWHPHEDSVIAASGEDN--QITIWDLSVEA 381 (440)
T ss_pred Cc--------eEEEEEhhhccC--CCcceeEEeccCCeeE-EEeccccCceEEeccCCC--cEEEEEeeccC
Confidence 66 466777753220 0012234444444554 899988766655544422 26677666654
No 494
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=73.66 E-value=1.2e+02 Score=33.06 Aligned_cols=130 Identities=9% Similarity=0.010 Sum_probs=57.5
Q ss_pred CCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 246 EPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 246 ~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
+.+...++++|+|+.+.....+ . ..++..... +...... ..++.|+++|+ +++.- ...
T Consensus 32 ~~~p~~ls~npngr~v~V~g~g--e--Y~iyt~~~~--r~k~~G~--------g~~~vw~~~n~-yAv~~-----~~~-- 89 (443)
T PF04053_consen 32 EIYPQSLSHNPNGRFVLVCGDG--E--YEIYTALAW--RNKAFGS--------GLSFVWSSRNR-YAVLE-----SSS-- 89 (443)
T ss_dssp SS--SEEEE-TTSSEEEEEETT--E--EEEEETTTT--EEEEEEE---------SEEEE-TSSE-EEEE------TTS--
T ss_pred CcCCeeEEECCCCCEEEEEcCC--E--EEEEEccCC--cccccCc--------eeEEEEecCcc-EEEEE-----CCC--
Confidence 4445678999999966664333 3 333432222 2222222 33799999776 44222 222
Q ss_pred CcCcccEEEE-EEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCCCCceEEEEEEEcCCCCCC-cceeee
Q psy463 326 PVDSWDHLTF-IDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQGSPIVQHMYRINIADPTAT-PECITC 403 (790)
Q Consensus 326 ~~~~~~~l~~-~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~~lt~ 403 (790)
.|.+ -+.+... .+.+... ..+..++. |..|...+.. .|..++... ++ ...+..
T Consensus 90 ------~I~I~kn~~~~~------~k~i~~~-~~~~~If~----G~LL~~~~~~------~i~~yDw~~--~~~i~~i~v 144 (443)
T PF04053_consen 90 ------TIKIYKNFKNEV------VKSIKLP-FSVEKIFG----GNLLGVKSSD------FICFYDWET--GKLIRRIDV 144 (443)
T ss_dssp -------EEEEETTEE-T------T-----S-S-EEEEE-----SSSEEEEETT------EEEEE-TTT----EEEEESS
T ss_pred ------eEEEEEcCcccc------ceEEcCC-cccceEEc----CcEEEEECCC------CEEEEEhhH--cceeeEEec
Confidence 3544 3443222 2333332 22333332 6655555433 466677765 22 222221
Q ss_pred cccccCCCcccEEEEEEecCCcEEEEEe
Q psy463 404 DLLTSANQKCSYSGATFSTNVSYYVLSC 431 (790)
Q Consensus 404 ~~~~~~~~~~~~~~~~~s~dg~~~~~~~ 431 (790)
..+..+.||++|+++++.+
T Consensus 145 ---------~~vk~V~Ws~~g~~val~t 163 (443)
T PF04053_consen 145 ---------SAVKYVIWSDDGELVALVT 163 (443)
T ss_dssp ----------E-EEEEE-TTSSEEEEE-
T ss_pred ---------CCCcEEEEECCCCEEEEEe
Confidence 1256789999999998874
No 495
>KOG1230|consensus
Probab=73.44 E-value=34 Score=35.52 Aligned_cols=141 Identities=11% Similarity=0.095 Sum_probs=69.1
Q ss_pred CcEEEEEEcCCcCCccCCcceec--cccce--EEEEEEeeeccCCccEEEEecccCCCCCCCccccceeEEEecCCcccc
Q psy463 142 WDHLTFIDLDDQAGIKDKVPVPL--TRGRF--TVTEILAWDERENNPLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGI 217 (790)
Q Consensus 142 ~~~l~~~~~~~~~~~~~~~~~~l--t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 217 (790)
+..+|++++.+.+ -.+| +.++. .-..+.+| .+.+|+|=... |..+-+-+.++||.+|+++=+-.
T Consensus 153 YkD~W~fd~~trk------weql~~~g~PS~RSGHRMvaw---K~~lilFGGFh---d~nr~y~YyNDvy~FdLdtykW~ 220 (521)
T KOG1230|consen 153 YKDLWLFDLKTRK------WEQLEFGGGPSPRSGHRMVAW---KRQLILFGGFH---DSNRDYIYYNDVYAFDLDTYKWS 220 (521)
T ss_pred hhheeeeeeccch------heeeccCCCCCCCccceeEEe---eeeEEEEccee---cCCCceEEeeeeEEEeccceeee
Confidence 5689999998774 2233 33321 22223333 11223332221 11222235579999999874332
Q ss_pred cCcCCccccccccceeehhhcccCCCCCCCEEEEEEEccCCcEEEEE-----------eccCcceEEEEEECCCCce---
Q psy463 218 KDKVPVPLTRGRFTVTEILAWDEKENNVEPVLSRVNWANESVVAAWV-----------NRVQNRARITRCSINEGTC--- 283 (790)
Q Consensus 218 ~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~wspDg~~~~~~-----------~r~~~~~~i~~~~~~~g~~--- 283 (790)
++.++.. | ..+..-..+..+|+|.++.+- .++-.+.+++++++.+|..
T Consensus 221 Klepsga-------------~-----PtpRSGcq~~vtpqg~i~vyGGYsK~~~kK~~dKG~~hsDmf~L~p~~~~~dKw 282 (521)
T KOG1230|consen 221 KLEPSGA-------------G-----PTPRSGCQFSVTPQGGIVVYGGYSKQRVKKDVDKGTRHSDMFLLKPEDGREDKW 282 (521)
T ss_pred eccCCCC-------------C-----CCCCCcceEEecCCCcEEEEcchhHhhhhhhhhcCceeeeeeeecCCcCCCcce
Confidence 2211110 0 223344567789999966552 2233356789998887632
Q ss_pred --eEEEEEeCCCcccccCCceeEccCCCEEEE
Q psy463 284 --DVVFSRDLDRGWFEPFDHLRFSSDGKKMLL 313 (790)
Q Consensus 284 --~~l~~~~~~~~~~~~~~~~~~spDg~~i~~ 313 (790)
..+-.... ...-..-.+....++++.++|
T Consensus 283 ~W~kvkp~g~-kPspRsgfsv~va~n~kal~F 313 (521)
T KOG1230|consen 283 VWTKVKPSGV-KPSPRSGFSVAVAKNHKALFF 313 (521)
T ss_pred eEeeccCCCC-CCCCCCceeEEEecCCceEEe
Confidence 11211100 000011225666788888775
No 496
>KOG0641|consensus
Probab=73.35 E-value=83 Score=29.66 Aligned_cols=70 Identities=6% Similarity=0.041 Sum_probs=42.8
Q ss_pred CceeEccCCCEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcCC
Q psy463 300 DHLRFSSDGKKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQG 379 (790)
Q Consensus 300 ~~~~~spDg~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~~ 379 (790)
......|.|+-|+ ... .+. .-.++|+.+|.+ .+..-....++.. ..|||...++.-.+.+
T Consensus 235 aav~vdpsgrll~-sg~----~ds--------sc~lydirg~r~-----iq~f~phsadir~-vrfsp~a~yllt~syd- 294 (350)
T KOG0641|consen 235 AAVAVDPSGRLLA-SGH----ADS--------SCMLYDIRGGRM-----IQRFHPHSADIRC-VRFSPGAHYLLTCSYD- 294 (350)
T ss_pred EEEEECCCcceee-ecc----CCC--------ceEEEEeeCCce-----eeeeCCCccceeE-EEeCCCceEEEEeccc-
Confidence 4567889998665 333 223 345668888872 3445555556665 7899987655544444
Q ss_pred CCceEEEEEEEcCC
Q psy463 380 SPIVQHMYRINIAD 393 (790)
Q Consensus 380 ~~~~~~l~~~~~~~ 393 (790)
..|-.-++.+
T Consensus 295 ----~~ikltdlqg 304 (350)
T KOG0641|consen 295 ----MKIKLTDLQG 304 (350)
T ss_pred ----ceEEEeeccc
Confidence 4565666655
No 497
>KOG0313|consensus
Probab=73.25 E-value=81 Score=32.46 Aligned_cols=146 Identities=14% Similarity=0.178 Sum_probs=0.0
Q ss_pred CCCCCEEEEEEEccCCcEEEEEeccCcceEEEEEECCCCceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccC
Q psy463 243 NNVEPVLSRVNWANESVVAAWVNRVQNRARITRCSINEGTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESD 322 (790)
Q Consensus 243 ~~~~~~~~~~~wspDg~~~~~~~r~~~~~~i~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~ 322 (790)
......+..+.|++ ...++..+.+.. |.+.|+.+|.+..-....-. ...+..+|..+.|+ ..+ .+
T Consensus 257 ~GHt~~Vs~V~w~d-~~v~yS~SwDHT---Ik~WDletg~~~~~~~~~ks------l~~i~~~~~~~Ll~-~gs----sd 321 (423)
T KOG0313|consen 257 EGHTEPVSSVVWSD-ATVIYSVSWDHT---IKVWDLETGGLKSTLTTNKS------LNCISYSPLSKLLA-SGS----SD 321 (423)
T ss_pred cccccceeeEEEcC-CCceEeecccce---EEEEEeecccceeeeecCcc------eeEeecccccceee-ecC----CC
Q ss_pred CCCCcCcccEEEEEEcCCCCc-ccCCCcccccCCCeEEeEEEeeecCCCEEEEEEcC-CCCceEEEEEEEcCCCCCCcce
Q psy463 323 GSTPVDSWDHLTFIDLDDQAG-IKDKVPVPLTRGRFTVTEILAWDEKENNVYFLSTQ-GSPIVQHMYRINIADPTATPEC 400 (790)
Q Consensus 323 g~~~~~~~~~l~~~d~~~~~~-~~~~~~~~lt~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~~~l~~~~~~~~~~~~~~ 400 (790)
. +|.++|..++.. +. ..++..+.--+.. +.|+|-....+..+.. +. ..||-+.... +-.-.
T Consensus 322 r--------~irl~DPR~~~gs~v---~~s~~gH~nwVss-vkwsp~~~~~~~S~S~D~t---~klWDvRS~k--~plyd 384 (423)
T KOG0313|consen 322 R--------HIRLWDPRTGDGSVV---SQSLIGHKNWVSS-VKWSPTNEFQLVSGSYDNT---VKLWDVRSTK--APLYD 384 (423)
T ss_pred C--------ceeecCCCCCCCcee---EEeeecchhhhhh-eecCCCCceEEEEEecCCe---EEEEEeccCC--Cccee
Q ss_pred eeecccccCCCcccEEEEEEecCCcEE
Q psy463 401 ITCDLLTSANQKCSYSGATFSTNVSYY 427 (790)
Q Consensus 401 lt~~~~~~~~~~~~~~~~~~s~dg~~~ 427 (790)
|.. .+.-+..+.|+..+-.+
T Consensus 385 I~~-------h~DKvl~vdW~~~~~Iv 404 (423)
T KOG0313|consen 385 IAG-------HNDKVLSVDWNEGGLIV 404 (423)
T ss_pred ecc-------CCceEEEEeccCCceEE
No 498
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=73.01 E-value=1.2e+02 Score=31.42 Aligned_cols=190 Identities=17% Similarity=0.127 Sum_probs=93.9
Q ss_pred CCEEEEEEEcc-CCcEEEEEeccC--cceEEEEEECCC--Cce--------eEEEEEeCCCcc----cccCCceeEccCC
Q psy463 246 EPVLSRVNWAN-ESVVAAWVNRVQ--NRARITRCSINE--GTC--------DVVFSRDLDRGW----FEPFDHLRFSSDG 308 (790)
Q Consensus 246 ~~~~~~~~wsp-Dg~~~~~~~r~~--~~~~i~~~~~~~--g~~--------~~l~~~~~~~~~----~~~~~~~~~spDg 308 (790)
-+.++.+.+.| +|++++.++++. +..++|...+.. +.. ..|....+ ..+ .+ ..++++.+||
T Consensus 19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G-~~~~~~~~D-~Egi~~~~~g 96 (326)
T PF13449_consen 19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDG-QPFPKNGLD-PEGIAVPPDG 96 (326)
T ss_pred cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCC-CcCCcCCCC-hhHeEEecCC
Confidence 45578889995 455888887765 344566655543 211 11221111 111 11 3467777777
Q ss_pred CEEEEEEccccccCCCCCcCcccEEEEEEcCCCCcccCC-Ccccc---------cCCCeEEeEEEeeecCCCEEEEEEcC
Q psy463 309 KKMLLILSHNQESDGSTPVDSWDHLTFIDLDDQAGIKDK-VPVPL---------TRGRFTVTEILAWDEKENNVYFLSTQ 378 (790)
Q Consensus 309 ~~i~~~~~~~~~~~g~~~~~~~~~l~~~d~~~~~~~~~~-~~~~l---------t~~~~~~~~~~~~s~dg~~l~~~~~~ 378 (790)
. ++ ++. |.... ......|+.++.++.- .... .+..+ ........+ ++++|||+.|+.....
T Consensus 97 ~-~~-is~---E~~~~--~~~~p~I~~~~~~G~~-~~~~~vP~~~~~~~~~~~~~~~N~G~E~-la~~~dG~~l~~~~E~ 167 (326)
T PF13449_consen 97 S-FW-ISS---EGGRT--GGIPPRIRRFDLDGRV-IRRFPVPAAFLPDANGTSGRRNNRGFEG-LAVSPDGRTLFAAMES 167 (326)
T ss_pred C-EE-EEe---CCccC--CCCCCEEEEECCCCcc-cceEccccccccccCccccccCCCCeEE-EEECCCCCEEEEEECc
Confidence 6 33 344 22200 0013689999987432 1100 01111 001122333 8899999988777654
Q ss_pred C----CCce-------EEEEEEEcCCCCCCcceeeeccccc--CCCcccEEEEEEecCCcEEEEEeecCC----CCeEEE
Q psy463 379 G----SPIV-------QHMYRINIADPTATPECITCDLLTS--ANQKCSYSGATFSTNVSYYVLSCIGPG----IPEIML 441 (790)
Q Consensus 379 ~----~~~~-------~~l~~~~~~~~~~~~~~lt~~~~~~--~~~~~~~~~~~~s~dg~~~~~~~~~~~----~~~i~~ 441 (790)
. .... ..|+.++............-.+... ......++.+.+-+|++.++...+... .-.||.
T Consensus 168 ~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~ 247 (326)
T PF13449_consen 168 PLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYR 247 (326)
T ss_pred cccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEE
Confidence 1 1111 4677777654111111111101000 002456777888899998887765221 445777
Q ss_pred EecCC
Q psy463 442 FDKTG 446 (790)
Q Consensus 442 ~~~~~ 446 (790)
+++..
T Consensus 248 v~l~~ 252 (326)
T PF13449_consen 248 VDLSD 252 (326)
T ss_pred EEccc
Confidence 77653
No 499
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=72.61 E-value=1e+02 Score=30.47 Aligned_cols=68 Identities=22% Similarity=0.332 Sum_probs=38.9
Q ss_pred EEEccCCcEEEEEeccCcceEEEEEECCC------CceeEEEEEeCCCcccccCCceeEccCCCEEEEEEccccccCCCC
Q psy463 252 VNWANESVVAAWVNRVQNRARITRCSINE------GTCDVVFSRDLDRGWFEPFDHLRFSSDGKKMLLILSHNQESDGST 325 (790)
Q Consensus 252 ~~wspDg~~~~~~~r~~~~~~i~~~~~~~------g~~~~l~~~~~~~~~~~~~~~~~~spDg~~i~~~~~~~~~~~g~~ 325 (790)
++-+.|||+++.+.... |-+....+ |+|+ +-+ +....|. ..+||||+.-|++.. ..|
T Consensus 3 ~~~~~~Gk~lAi~qd~~----iEiRsa~Ddf~si~~kcq-Vpk-D~~PQWR----kl~WSpD~tlLa~a~-----S~G-- 65 (282)
T PF15492_consen 3 LALSSDGKLLAILQDQC----IEIRSAKDDFSSIIGKCQ-VPK-DPNPQWR----KLAWSPDCTLLAYAE-----STG-- 65 (282)
T ss_pred eeecCCCcEEEEEeccE----EEEEeccCCchheeEEEe-cCC-CCCchhe----EEEECCCCcEEEEEc-----CCC--
Confidence 45689999766654321 33333222 2221 211 1123354 588999999888543 356
Q ss_pred CcCcccEEEEEEcCCCC
Q psy463 326 PVDSWDHLTFIDLDDQA 342 (790)
Q Consensus 326 ~~~~~~~l~~~d~~~~~ 342 (790)
+|.++|+-+.+
T Consensus 66 ------~i~vfdl~g~~ 76 (282)
T PF15492_consen 66 ------TIRVFDLMGSE 76 (282)
T ss_pred ------eEEEEecccce
Confidence 68888887654
No 500
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=71.93 E-value=1.4e+02 Score=31.66 Aligned_cols=20 Identities=20% Similarity=0.336 Sum_probs=13.7
Q ss_pred CCEEEEEEcCCCCceEEEEEEEcCC
Q psy463 369 ENNVYFLSTQGSPIVQHMYRINIAD 393 (790)
Q Consensus 369 g~~l~~~~~~~~~~~~~l~~~~~~~ 393 (790)
+..+|+.+.. ..|+.++.++
T Consensus 241 ~~~vy~~~~~-----g~l~a~d~~t 260 (377)
T TIGR03300 241 GGQVYAVSYQ-----GRVAALDLRS 260 (377)
T ss_pred CCEEEEEEcC-----CEEEEEECCC
Confidence 4567776654 4688888866
Done!