Query psy4640
Match_columns 109
No_of_seqs 140 out of 803
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 21:59:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4640.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4640hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2coc_A FYVE, rhogef and PH dom 99.9 8.5E-25 2.9E-29 143.9 9.9 89 19-108 21-112 (112)
2 1wi1_A Calcium-dependent activ 99.9 7.3E-23 2.5E-27 137.3 8.4 85 18-104 23-112 (126)
3 1v88_A Oxysterol binding prote 99.9 1.7E-22 5.6E-27 135.7 9.8 84 21-107 23-129 (130)
4 1dyn_A Dynamin; signal transdu 99.9 4.1E-22 1.4E-26 133.1 10.7 80 21-101 30-116 (125)
5 3cxb_B Pleckstrin homology dom 99.9 3.3E-22 1.1E-26 130.4 9.5 86 19-104 18-103 (112)
6 2d9y_A Pleckstrin homology dom 99.9 1.3E-21 4.4E-26 126.4 11.3 87 22-108 29-115 (117)
7 1wgq_A FYVE, rhogef and PH dom 99.9 3.5E-21 1.2E-25 123.6 12.3 85 20-106 23-107 (109)
8 1v5p_A Pleckstrin homology dom 99.9 1.6E-21 5.5E-26 130.2 11.1 89 18-109 30-126 (126)
9 2dkp_A Pleckstrin homology dom 99.9 2.3E-21 8E-26 127.1 9.5 84 22-105 39-122 (128)
10 2yry_A Pleckstrin homology dom 99.9 3.5E-21 1.2E-25 125.4 9.9 83 22-104 40-122 (122)
11 2p0d_A RHO GTPase-activating p 99.9 4.6E-21 1.6E-25 127.8 10.5 81 21-103 34-125 (129)
12 1upq_A PEPP1; PH domain, phosp 99.8 7.7E-21 2.6E-25 123.9 9.8 85 22-106 29-113 (123)
13 1v89_A Hypothetical protein KI 99.8 2.9E-20 1E-24 119.8 11.2 86 22-107 25-117 (118)
14 3pp2_A RHO GTPase-activating p 99.8 6.1E-20 2.1E-24 121.6 10.4 82 20-102 30-123 (124)
15 2dtc_A RAL guanine nucleotide 99.8 9.4E-20 3.2E-24 122.2 10.2 83 21-106 24-116 (126)
16 1u5d_A SKAP55, SRC kinase-asso 99.8 1E-19 3.4E-24 115.5 9.7 82 22-103 24-106 (108)
17 2w2x_D 1-phosphatidylinositol- 99.8 2.5E-20 8.6E-25 123.4 7.0 83 21-104 28-121 (124)
18 1pls_A Pleckstrin homology dom 99.8 2.8E-19 9.4E-24 115.2 11.5 82 22-104 22-103 (113)
19 1x1f_A Signal-transducing adap 99.8 1.2E-19 3.9E-24 124.6 9.9 84 21-106 34-117 (149)
20 1wjm_A Beta-spectrin III; PH d 99.8 1E-19 3.5E-24 119.3 8.3 85 21-107 32-122 (123)
21 4a6h_A Phosphatidylinositol 4, 99.8 2.3E-19 7.7E-24 119.1 10.0 81 22-102 23-118 (120)
22 1fgy_A GRP1; PH domain, signal 99.8 3.4E-19 1.2E-23 116.2 10.7 80 22-104 22-122 (127)
23 2i5f_A Pleckstrin; PH domain, 99.8 3.7E-19 1.3E-23 113.5 10.6 80 22-101 24-108 (109)
24 2cof_A Protein KIAA1914; PH do 99.8 5E-19 1.7E-23 113.6 9.8 80 22-104 23-103 (107)
25 1x05_A Pleckstrin; PH domain, 99.8 6.2E-19 2.1E-23 115.9 10.3 82 23-104 36-122 (129)
26 3rcp_A Pleckstrin homology dom 99.8 7.1E-19 2.4E-23 111.6 10.0 76 24-104 18-95 (103)
27 2dhk_A TBC1 domain family memb 99.8 4.4E-19 1.5E-23 116.0 9.1 78 22-104 27-106 (119)
28 2ys3_A UNC-112-related protein 99.8 7.6E-19 2.6E-23 118.9 9.9 83 20-104 27-114 (137)
29 1u5f_A SRC-associated adaptor 99.8 1.1E-18 3.9E-23 117.7 10.6 83 22-104 38-121 (148)
30 1dro_A Beta-spectrin; cytoskel 99.8 1.2E-19 4.1E-24 119.2 5.0 82 19-102 30-119 (122)
31 1eaz_A Tandem PH domain contai 99.8 1.1E-18 3.7E-23 113.7 9.0 83 22-105 31-114 (125)
32 1wg7_A Dedicator of cytokinesi 99.8 1.1E-18 3.8E-23 117.6 9.3 78 22-102 41-124 (150)
33 1btn_A Beta-spectrin; signal t 99.8 1.3E-18 4.5E-23 110.4 9.0 79 20-100 22-106 (106)
34 1fao_A Dual adaptor of phospho 99.8 2.5E-18 8.7E-23 112.6 10.3 77 23-103 36-113 (126)
35 1v5u_A SBF1, SET binding facto 99.8 3.3E-18 1.1E-22 110.3 10.4 82 22-104 25-113 (117)
36 2d9v_A Pleckstrin homology dom 99.8 1.8E-18 6E-23 115.0 9.3 81 23-103 26-115 (130)
37 2dn6_A KIAA0640 protein; PH do 99.8 3E-18 1E-22 110.1 10.0 80 22-104 25-105 (115)
38 3aj4_A Pleckstrin homology dom 99.8 1.2E-18 4.2E-23 112.0 8.0 80 23-102 23-111 (112)
39 3a8p_A T-lymphoma invasion and 99.8 2.3E-18 8E-23 127.3 10.5 81 21-103 39-125 (263)
40 1x1g_A Pleckstrin 2; PH domain 99.8 1.5E-18 5.3E-23 113.9 8.2 79 24-102 37-124 (129)
41 2d9x_A Oxysterol binding prote 99.8 1.1E-18 3.7E-23 114.0 7.3 76 24-104 27-106 (120)
42 2y7b_A Actin-binding protein a 99.8 7.7E-19 2.6E-23 116.0 6.5 82 21-103 23-129 (134)
43 1btk_A Bruton'S tyrosine kinas 99.8 2.4E-18 8.1E-23 119.7 8.6 81 22-103 25-133 (169)
44 1u5e_A SRC-associated adaptor 99.8 6.4E-18 2.2E-22 121.3 10.6 82 22-103 127-209 (211)
45 2cod_A Centaurin-delta 1; ARF 99.7 5.1E-18 1.7E-22 109.7 8.7 75 22-104 26-101 (115)
46 2rsg_A Collagen type IV alpha- 99.7 6.4E-18 2.2E-22 105.8 8.6 72 24-101 20-93 (94)
47 2lul_A Tyrosine-protein kinase 99.7 1.7E-17 5.7E-22 114.7 10.5 80 24-104 39-123 (164)
48 2j59_M RHO-GTPase activating p 99.7 1.2E-17 4.2E-22 114.6 8.7 80 21-103 29-112 (168)
49 2da0_A 130-kDa phosphatidylino 99.7 4.6E-17 1.6E-21 105.5 10.0 74 23-103 29-102 (114)
50 2r09_A Cytohesin-3; autoinhibi 99.7 5.8E-17 2E-21 123.6 10.2 78 22-102 230-328 (347)
51 1unq_A RAC-alpha serine/threon 99.7 1.4E-17 4.8E-22 109.0 4.7 81 23-104 26-112 (125)
52 3tfm_A Myosin X; split PH doma 99.7 1.3E-16 4.6E-21 115.2 9.3 76 22-102 80-155 (228)
53 2q13_A DCC-interacting protein 99.7 1.2E-16 4.1E-21 122.7 8.9 80 21-104 297-377 (385)
54 2rlo_A Centaurin-gamma 1; spli 99.7 1E-16 3.5E-21 105.9 5.7 85 18-103 20-125 (128)
55 3a8n_A TIAM-1, T-lymphoma inva 99.7 7.8E-17 2.7E-21 120.4 5.7 82 20-103 38-125 (279)
56 2fjl_A 1-phosphatidylinositol- 99.7 7E-16 2.4E-20 105.9 9.4 58 45-103 90-149 (150)
57 3lju_X ARF-GAP with dual PH do 99.6 9.3E-16 3.2E-20 118.6 11.1 80 22-102 287-372 (386)
58 1qqg_A IRS-1, insulin receptor 99.6 5E-16 1.7E-20 114.9 8.5 80 21-104 22-114 (264)
59 4h8s_A DCC-interacting protein 99.6 3.1E-16 1.1E-20 121.1 6.6 79 21-103 320-399 (407)
60 3tca_A Amyloid beta A4 precurs 99.6 1.2E-15 4.2E-20 112.0 6.8 83 21-103 184-277 (291)
61 4f7h_A Fermitin family homolog 99.6 5.2E-15 1.8E-19 102.9 8.9 84 19-104 64-152 (173)
62 3lju_X ARF-GAP with dual PH do 99.6 4.9E-15 1.7E-19 114.6 7.0 76 25-102 166-246 (386)
63 2rov_A RHO-associated protein 99.5 2.5E-14 8.5E-19 94.3 8.9 83 20-102 19-115 (117)
64 4bbk_A Kindlin-1, fermitin fam 99.5 4.8E-14 1.7E-18 97.2 9.2 83 19-104 43-131 (165)
65 2d9w_A Docking protein 2; PH d 99.5 7.2E-13 2.4E-17 88.4 10.2 93 13-108 23-127 (127)
66 3hk0_A Growth factor receptor- 99.3 6.5E-12 2.2E-16 92.7 9.1 84 20-103 147-241 (256)
67 4gmv_A RAS-associated and plec 99.3 8.9E-12 3E-16 93.1 7.5 83 21-103 174-267 (281)
68 4ejn_A RAC-alpha serine/threon 99.1 8.6E-11 3E-15 90.4 6.5 82 21-102 22-108 (446)
69 2coa_A Protein kinase C, D2 ty 99.0 3.4E-09 1.2E-13 70.5 9.1 89 19-108 22-125 (125)
70 1w1g_A HPDK1, 3-phosphoinositi 99.0 2E-09 6.9E-14 73.8 7.8 72 24-104 69-141 (151)
71 2d9z_A Protein kinase C, NU ty 98.9 7.6E-09 2.6E-13 69.0 9.4 89 19-108 22-129 (129)
72 1v61_A RAC/CDC42 guanine nucle 98.8 3.6E-08 1.2E-12 66.2 7.9 81 26-109 49-132 (132)
73 1v5m_A SH2 and PH domain-conta 98.6 2.1E-07 7.2E-12 62.4 7.8 72 31-102 58-130 (136)
74 3qwm_A Iqsec1, IQ motif and SE 98.4 5.8E-06 2E-10 55.9 10.9 85 16-103 29-123 (140)
75 1zc3_B Exocyst complex protein 98.4 5.1E-06 1.8E-10 53.9 10.0 58 43-103 51-108 (113)
76 3mpx_A FYVE, rhogef and PH dom 98.1 1.5E-05 5.2E-10 61.3 8.5 76 24-103 261-338 (434)
77 1dbh_A Protein (human SOS 1); 98.0 3.8E-05 1.3E-09 57.6 9.6 77 24-102 262-349 (354)
78 3tfm_A Myosin X; split PH doma 97.9 2E-05 7E-10 56.3 6.6 53 44-100 174-227 (228)
79 2vrw_B P95VAV, VAV1, proto-onc 97.8 0.00018 6.2E-09 54.9 10.0 83 24-106 253-339 (406)
80 3ml4_A Protein DOK-7; tyrosine 97.8 8.6E-05 3E-09 53.6 7.6 82 15-100 18-111 (224)
81 2z0q_A XPLN, RHO guanine nucle 97.8 6.4E-05 2.2E-09 56.2 6.8 81 21-101 243-345 (346)
82 1mai_A Phospholipase C delta-1 97.7 0.00022 7.5E-09 47.0 8.5 80 24-103 31-122 (131)
83 1nty_A Triple functional domai 97.7 0.00012 4.1E-09 54.1 7.4 78 22-103 222-309 (311)
84 2pz1_A RHO guanine nucleotide 97.7 0.00045 1.5E-08 53.6 10.8 79 25-103 354-441 (466)
85 3t06_A PDZ-rhogef, RHO guanine 97.7 0.00033 1.1E-08 53.5 9.8 78 24-106 313-412 (418)
86 2rgn_B RHOA/RAC/CDC42 exchange 97.6 0.00026 8.8E-09 53.3 8.2 79 22-104 229-320 (354)
87 1kz7_A Guanine nucleotide exch 97.6 0.00034 1.2E-08 52.7 8.8 77 24-104 240-327 (353)
88 1xcg_A PDZ-rhogef, RHO guanine 97.6 0.00051 1.7E-08 51.6 9.7 74 24-102 271-366 (368)
89 2lg1_A A-kinase anchor protein 97.6 0.00014 4.8E-09 50.8 6.0 55 46-104 118-174 (185)
90 3zvr_A Dynamin-1; hydrolase, D 97.6 0.00064 2.2E-08 56.7 10.9 79 21-100 558-643 (772)
91 3ky9_A Proto-oncogene VAV; cal 97.6 0.0004 1.4E-08 55.7 9.2 82 25-106 426-511 (587)
92 2dfk_A Collybistin II; DH doma 97.5 0.00043 1.5E-08 53.0 8.7 79 25-103 277-364 (402)
93 1z87_A Alpha-1-syntrophin; pro 97.5 0.00048 1.6E-08 50.7 8.5 56 45-102 205-262 (263)
94 3jzy_A Intersectin 2; C2 domai 97.5 1.4E-05 4.7E-10 62.3 0.0 57 45-104 308-364 (510)
95 1txd_A RHO guanine nucleotide 97.5 0.00062 2.1E-08 51.5 9.1 56 45-104 314-371 (385)
96 1foe_A T-lymphoma invasion and 97.4 0.0015 5.2E-08 49.2 9.8 60 44-104 302-368 (377)
97 3ksy_A SOS-1, SON of sevenless 97.4 0.00068 2.3E-08 58.0 8.4 79 22-102 457-546 (1049)
98 3odw_A RHO guanine nucleotide 97.3 0.00087 3E-08 53.4 8.5 57 46-107 470-529 (536)
99 3p6a_A RHO guanine nucleotide 97.1 0.0023 8E-08 48.0 8.2 55 46-104 317-373 (377)
100 2adz_A Alpha-1-syntrophin; pro 96.0 0.035 1.2E-06 38.7 7.6 55 45-101 120-176 (178)
101 1fho_A UNC-89; pleckstrin homo 93.2 0.053 1.8E-06 35.2 2.6 55 44-101 53-111 (119)
102 3v5w_A G-protein coupled recep 89.9 2.8 9.6E-05 34.5 9.9 69 27-101 582-651 (689)
103 3ulb_A Target of rapamycin com 75.9 13 0.00046 24.0 6.9 39 66-104 73-116 (121)
104 3qr0_A Phospholipase C-beta (P 74.2 15 0.00052 30.8 8.3 35 67-101 103-141 (816)
105 1j0w_A Downstream of tyrosine 69.4 18 0.00061 22.6 8.9 88 12-104 11-101 (103)
106 3a98_B Engulfment and cell mot 68.9 10 0.00035 26.4 5.3 34 68-101 116-149 (203)
107 4emo_A Sharpin; pleckstrin hom 66.9 10 0.00036 24.6 4.5 35 68-102 89-123 (129)
108 1zsq_A Myotubularin-related pr 58.1 64 0.0022 25.7 8.6 77 27-103 37-116 (528)
109 2zkm_X 1-phosphatidylinositol- 57.5 11 0.00037 31.5 4.2 35 68-102 97-135 (799)
110 3hie_A Protein PSL1, exocyst c 57.2 36 0.0012 23.2 6.1 68 30-104 78-150 (171)
111 1lw3_A Myotubularin-related pr 56.4 70 0.0024 26.3 8.7 76 27-102 109-187 (657)
112 2yf0_A Myotubularin-related pr 56.2 74 0.0025 25.2 10.0 71 27-103 30-101 (512)
113 3ohm_B 1-phosphatidylinositol- 56.2 40 0.0014 28.6 7.4 35 68-102 101-139 (885)
114 2dlw_A Docking protein 2, isof 55.3 37 0.0013 21.5 7.0 81 23-108 29-112 (113)
115 3d8d_A Amyloid beta A4 precurs 51.0 52 0.0018 21.9 8.0 72 17-89 48-124 (148)
116 3voq_A Target of rapamycin com 48.6 42 0.0014 21.8 5.1 36 68-104 83-121 (125)
117 3ro3_B Minsc, peptide of prote 45.6 16 0.00054 16.4 1.9 15 87-101 7-21 (22)
118 3a58_A Exocyst complex compone 39.3 39 0.0013 25.3 4.2 68 30-104 148-220 (320)
119 1e0n_A Hypothetical protein; Y 32.7 26 0.0009 16.3 1.7 17 72-88 5-21 (27)
120 3bid_A UPF0339 protein NMB1088 26.7 91 0.0031 17.5 4.9 35 65-100 10-47 (64)
121 2rbb_A Glyoxalase/bleomycin re 26.3 82 0.0028 18.9 3.7 24 78-101 77-100 (141)
122 1mwq_A Hypothetical protein HI 25.6 56 0.0019 19.3 2.7 20 78-97 62-81 (101)
123 2a4x_A Mitomycin-binding prote 24.5 1.2E+02 0.0039 18.1 4.2 25 76-100 71-95 (138)
124 1e0l_A Formin binding protein; 24.1 49 0.0017 16.3 1.9 15 74-88 13-27 (37)
125 1ywi_A Formin-binding protein 24.0 59 0.002 16.4 2.3 15 74-88 19-33 (41)
126 1u7i_A Hypothetical protein; s 23.8 93 0.0032 18.9 3.6 22 77-98 79-100 (136)
127 1hyw_A GPW, head-TO-tail joini 22.4 1.1E+02 0.0039 17.4 3.5 32 70-102 24-55 (68)
128 2ysi_A Transcription elongatio 21.5 54 0.0018 16.5 1.8 15 74-88 17-31 (40)
129 3e5d_A Putative glyoxalase I; 21.3 1.1E+02 0.0036 17.6 3.4 24 78-101 73-96 (127)
130 1xqa_A Glyoxalase/bleomycin re 20.6 1.1E+02 0.0039 17.2 3.4 25 77-101 61-85 (113)
131 2wzo_A Transforming growth fac 20.4 1.2E+02 0.004 19.6 3.7 32 67-100 66-97 (146)
132 2kjz_A ATC0852; protein of unk 20.3 1.4E+02 0.0046 18.2 3.9 26 76-101 86-111 (144)
No 1
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.92 E-value=8.5e-25 Score=143.86 Aligned_cols=89 Identities=24% Similarity=0.296 Sum_probs=76.7
Q ss_pred cccCCceEEeeCC---eEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHH
Q psy4640 19 SVGSDLDSIGSRN---GLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMN 95 (109)
Q Consensus 19 ~~~~~~~~vL~~~---~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~ 95 (109)
+.+++.|+||+++ +||||++++|.+|.|.|+|+||+|..+.+.+...++|+|+|.+++ ++|+|+|+|+++|++||+
T Consensus 21 ~~WkkrWfVL~~~~~~~Ly~Yk~~~d~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~~~-~~y~f~A~s~e~~~~Wl~ 99 (112)
T 2coc_A 21 ETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAK-QSWYLSASSAELQQQWLE 99 (112)
T ss_dssp SCEEEEEEECCTTCTTCEEEECCTTCSSSCSEECGGGCEEECCCSSSCCSSSEEEEEEETT-EEEEEEESSHHHHHHHHH
T ss_pred CCceEEEEEEECCCccEEEEECCCCccCcceEEEcCCCEEEecCcccccCCCCEEEEecCC-eEEEEEcCCHHHHHHHHH
Confidence 4455579999985 899999999999999999999999865444445678999999765 899999999999999999
Q ss_pred HHHHhhhhccCCC
Q psy4640 96 ALSLASILQNSST 108 (109)
Q Consensus 96 aI~~a~~~~~~~~ 108 (109)
+|+.|+..+.|.+
T Consensus 100 al~~A~~~~~~~~ 112 (112)
T 2coc_A 100 TLSTAAHSGPSSG 112 (112)
T ss_dssp HHHHHHSCCSSCC
T ss_pred HHHHHhcCCCCCC
Confidence 9999998887754
No 2
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.88 E-value=7.3e-23 Score=137.27 Aligned_cols=85 Identities=16% Similarity=0.099 Sum_probs=71.9
Q ss_pred ccccCCceEEeeCCeEEEEc----CCCCCcccEEEEcCCeEEeecCC-CCcccceeeEEEeeCCceEEEEEcCCHHHHHH
Q psy4640 18 KSVGSDLDSIGSRNGLAVTD----RFEEEKLLGSILLPSYKISPCSS-DDKVFRKFSFKAEHANMRTYYFAADTRESMIQ 92 (109)
Q Consensus 18 ~~~~~~~~~vL~~~~L~yyk----~~~d~~p~G~I~L~~~~V~~~~~-~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~ 92 (109)
|.|-++ |+||++++||||+ ++.+.+|.|.|+|++|+|..+.+ .+..+++|+|++.+++ ++|+|+|||++||++
T Consensus 23 K~WKrR-wFVL~~~~LyYfk~~~~~~~~~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v~~~-~ty~~~Adseee~~~ 100 (126)
T 1wi1_A 23 KRWKKR-FFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEG-DTVIFASDDEQDRIL 100 (126)
T ss_dssp CSCEEE-EEEEEEEETTEEEEEECCSSSSCCSEEEECSSCEEEECCCCSSCCSCSSEEEEECSS-CEEEEECSSHHHHHH
T ss_pred cccceE-EEEEeCCEEEEEEcccccccCCCCceEEECCCcEEEEecCCcccccCceEEEEecCC-ceEEEEcCCHHHHHH
Confidence 344443 7999999999999 99999999999999999986643 2334678999999876 679999999999999
Q ss_pred HHHHHHHhhhhc
Q psy4640 93 WMNALSLASILQ 104 (109)
Q Consensus 93 Wi~aI~~a~~~~ 104 (109)
||+||..|+...
T Consensus 101 WikAi~~A~~~~ 112 (126)
T 1wi1_A 101 WVQAMYRATGQS 112 (126)
T ss_dssp HHHHHHHHHTCS
T ss_pred HHHHHHHHhccc
Confidence 999999998654
No 3
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.88 E-value=1.7e-22 Score=135.70 Aligned_cols=84 Identities=24% Similarity=0.204 Sum_probs=69.7
Q ss_pred cCCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCc-----------------------
Q psy4640 21 GSDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANM----------------------- 77 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~----------------------- 77 (109)
+++-|+||++++|+|||++++.+|.|.|+|++|+|..... .+++|+|+|.++..
T Consensus 23 WkrRWfVLk~~~L~yyk~~~~~~p~G~I~L~~~~v~~~~~---~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~ 99 (130)
T 1v88_A 23 WTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNACEIIERPS---KKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPS 99 (130)
T ss_dssp CEEEEEEEETTEEEEESCSSSCCCCEEEECSSCEECCCCT---TTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCS
T ss_pred ceEEEEEEECCEEEEECCCCCCCceEEEEcCCCEEEECCC---CCCCeEEEEEcCCccccccccCCcccccccccccCCc
Confidence 4445899999999999999999999999999999854433 24569999987643
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHhhhhccCC
Q psy4640 78 RTYYFAADTRESMIQWMNALSLASILQNSS 107 (109)
Q Consensus 78 r~y~fsA~s~~e~~~Wi~aI~~a~~~~~~~ 107 (109)
++|+|+|+|++|+++||+||+.|+....++
T Consensus 100 ~~~~f~A~s~~e~~~Wi~ai~~a~~~~~~~ 129 (130)
T 1v88_A 100 SYLIIRATSESDGRCWMDALELALKSGPSS 129 (130)
T ss_dssp SCCEEECSSHHHHHHHHHHHHHHHTTTTTC
T ss_pred eEEEEECCCHHHHHHHHHHHHHHHhcCCCC
Confidence 459999999999999999999998655443
No 4
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.88 E-value=4.1e-22 Score=133.07 Aligned_cols=80 Identities=15% Similarity=0.130 Sum_probs=70.3
Q ss_pred cCCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCC-------ceEEEEEcCCHHHHHHH
Q psy4640 21 GSDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN-------MRTYYFAADTRESMIQW 93 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~-------~r~y~fsA~s~~e~~~W 93 (109)
+++-|+||+++||+||||+++++|.|+|+|+++.|..+++. ...++|+|+|.+++ +++|.|+|+|.+||++|
T Consensus 30 wk~rWFVLt~~~L~yyKd~~eke~~G~IpL~~~~vr~v~~~-~~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~W 108 (125)
T 1dyn_A 30 SKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKG-FMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSW 108 (125)
T ss_dssp SEEEEEEEESSEEEEESSTTCSCEEEEEECTTEEEEECCSC-SSSSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHH
T ss_pred ceeeEEEEeccceeeecCCcccccceEEECCCceEeccCCC-CCCCceEEEEECCCCccccccceEEEEeCCCHHHHHHH
Confidence 56679999999999999999999999999999999887653 23678999998765 45999999999999999
Q ss_pred HHHHHHhh
Q psy4640 94 MNALSLAS 101 (109)
Q Consensus 94 i~aI~~a~ 101 (109)
+++|.+|.
T Consensus 109 i~s~~ra~ 116 (125)
T 1dyn_A 109 KASFLRAG 116 (125)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhCc
Confidence 99996664
No 5
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.87 E-value=3.3e-22 Score=130.43 Aligned_cols=86 Identities=15% Similarity=0.091 Sum_probs=70.2
Q ss_pred cccCCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHH
Q psy4640 19 SVGSDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALS 98 (109)
Q Consensus 19 ~~~~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~ 98 (109)
+.+++.|+||++++|||||++++..|.|.|+|.++.+..+...+..+++|+|+|.+++.++|+|+|+|++||++||++|+
T Consensus 18 k~Wk~rwfvL~~~~L~~yk~~~~~~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~~y~f~A~s~ee~~~Wi~ai~ 97 (112)
T 3cxb_B 18 EHWKTCFVVLSNGILYQYPDRTDVIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLC 97 (112)
T ss_dssp CCCEEEEEEEETTEEEEESSSSCCSCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCCEEEECSSHHHHHHHHHHHH
T ss_pred CCceEEEEEEECCEEEEECCCCCCCccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 44455789999999999999999999999999877554111112246789999998878999999999999999999999
Q ss_pred Hhhhhc
Q psy4640 99 LASILQ 104 (109)
Q Consensus 99 ~a~~~~ 104 (109)
.|+...
T Consensus 98 ~~~~~~ 103 (112)
T 3cxb_B 98 QAVSKG 103 (112)
T ss_dssp HHHTCC
T ss_pred HHhhcc
Confidence 988654
No 6
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=1.3e-21 Score=126.42 Aligned_cols=87 Identities=32% Similarity=0.497 Sum_probs=75.4
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
++-|+||+++.|+||+++.+..|.|.|+|.+|+|..+.+.+..+++|+|.|.+++.|+|+|+|+|++|+++||++|+.|+
T Consensus 29 k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 108 (117)
T 2d9y_A 29 NKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAA 108 (117)
T ss_dssp EEEEEEEETTEEEEESSTTCCSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred eEEEEEECCCEEEEECCCCCCCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 33479999999999999999999999999999987765544456789999987777999999999999999999999999
Q ss_pred hhccCCC
Q psy4640 102 ILQNSST 108 (109)
Q Consensus 102 ~~~~~~~ 108 (109)
..+.+.+
T Consensus 109 ~~~~~p~ 115 (117)
T 2d9y_A 109 RVQSGPS 115 (117)
T ss_dssp CCTTCSS
T ss_pred hhccCCC
Confidence 8775544
No 7
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.87 E-value=3.5e-21 Score=123.65 Aligned_cols=85 Identities=20% Similarity=0.188 Sum_probs=73.2
Q ss_pred ccCCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHH
Q psy4640 20 VGSDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 99 (109)
Q Consensus 20 ~~~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~ 99 (109)
.+++-|+||+++.|+||+++.+..|.|.|+|.+|++....+. .+++++|+|.+++.|+|+|+|+|++|+++||++|+.
T Consensus 23 ~Wk~RwfvL~~~~L~yyk~~~~~~~~~~i~L~~~~~~~~~~~--~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~ 100 (109)
T 1wgq_A 23 PWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDE--NSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQE 100 (109)
T ss_dssp CCEEEEEEEETTEEEEESCTTCSSCSEEEECSSEEEEECCCS--SCSSSEEEEEETTEEEEEEECSSHHHHHHHHHHHHH
T ss_pred CceeEEEEEeCCEEEEECCCCcCccCceEECCCCEEEECCCC--CCCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHH
Confidence 334458999999999999999999999999999987665442 245799999988889999999999999999999999
Q ss_pred hhhhccC
Q psy4640 100 ASILQNS 106 (109)
Q Consensus 100 a~~~~~~ 106 (109)
|+....+
T Consensus 101 a~~~~~~ 107 (109)
T 1wgq_A 101 GTVSGPS 107 (109)
T ss_dssp HHSCCCC
T ss_pred HhccCCC
Confidence 9877644
No 8
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.87 E-value=1.6e-21 Score=130.17 Aligned_cols=89 Identities=22% Similarity=0.246 Sum_probs=70.8
Q ss_pred ccccCCceEEee---CCeEEEEcC----CCCCcccEEEEcCC-eEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHH
Q psy4640 18 KSVGSDLDSIGS---RNGLAVTDR----FEEEKLLGSILLPS-YKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRES 89 (109)
Q Consensus 18 ~~~~~~~~~vL~---~~~L~yyk~----~~d~~p~G~I~L~~-~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e 89 (109)
|.+.++ |+||+ ++.||||++ +.+++|+|.|+|.. ++|..+.+.+..+++|||.|.++ .|+|||+|+|++|
T Consensus 30 k~WkrR-wFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t~-~r~y~l~A~s~~e 107 (126)
T 1v5p_A 30 GKFLRR-YFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVINAL-SQRYFLQANDQKD 107 (126)
T ss_dssp SCEEEE-EEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEEEECS-SCEEEEECSSHHH
T ss_pred CCccce-EEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcccCCCCCEEEEEECC-CEEEEEECCCHHH
Confidence 444443 79999 778999999 56789999999998 47877653333466899988654 5999999999999
Q ss_pred HHHHHHHHHHhhhhccCCCC
Q psy4640 90 MIQWMNALSLASILQNSSTG 109 (109)
Q Consensus 90 ~~~Wi~aI~~a~~~~~~~~~ 109 (109)
|++||+||+.|+..+ +.+|
T Consensus 108 ~~~Wi~al~~a~~~~-~~~~ 126 (126)
T 1v5p_A 108 LKDWVEALNQASKSG-PSSG 126 (126)
T ss_dssp HHHHHHHHHHTTTTS-SSCC
T ss_pred HHHHHHHHHHHHhcC-CCCC
Confidence 999999999999765 4444
No 9
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.86 E-value=2.3e-21 Score=127.14 Aligned_cols=84 Identities=43% Similarity=0.611 Sum_probs=73.4
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
++-|+||+++.|+||+++.+..|.|.|+|.+|+|..+...+..+++|+|.|.+++.|+|+|+|+|++|+++||++|+.|+
T Consensus 39 k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 118 (128)
T 2dkp_A 39 KKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAA 118 (128)
T ss_dssp EEEEEEEETTEEEEESSTTCCSEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred eeEEEEEeCCEEEEECCCCCcccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 33478999999999999999999999999999987765433346789999998877999999999999999999999998
Q ss_pred hhcc
Q psy4640 102 ILQN 105 (109)
Q Consensus 102 ~~~~ 105 (109)
..+.
T Consensus 119 ~~~~ 122 (128)
T 2dkp_A 119 LVQT 122 (128)
T ss_dssp SCCC
T ss_pred hccC
Confidence 8763
No 10
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=3.5e-21 Score=125.39 Aligned_cols=83 Identities=34% Similarity=0.508 Sum_probs=72.0
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
++-|+||+++.|+||+++.+..|.|.|+|.+|+|..+.+.+..+++++|.|.+++.|+|+|+|+|++|+++||++|+.|+
T Consensus 40 k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 119 (122)
T 2yry_A 40 NKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAA 119 (122)
T ss_dssp EEEEEEEETTEEEEESSTTCCSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCEEEEECCCCCCCcccEEEcCCCEEEEcCccccCCcccEEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 33479999999999999999999999999999887665444456789999987777999999999999999999999998
Q ss_pred hhc
Q psy4640 102 ILQ 104 (109)
Q Consensus 102 ~~~ 104 (109)
..|
T Consensus 120 ~~q 122 (122)
T 2yry_A 120 RVQ 122 (122)
T ss_dssp CCC
T ss_pred hcC
Confidence 643
No 11
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.85 E-value=4.6e-21 Score=127.83 Aligned_cols=81 Identities=11% Similarity=0.036 Sum_probs=68.2
Q ss_pred cCCceEEeeCCeEEEEcCCC-----------CCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHH
Q psy4640 21 GSDLDSIGSRNGLAVTDRFE-----------EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRES 89 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~~-----------d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e 89 (109)
++..|+||+++.|+|||++. +..|.|.|+|.+|+|..+.+ ..+++|+|+|.+++.++|+|+|+|++|
T Consensus 34 Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~~~--~~kr~~~F~l~t~~~~~yl~qA~s~~e 111 (129)
T 2p0d_A 34 WGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRH--LSSRRNVLHIRTIPGHEFLLQSDHETE 111 (129)
T ss_dssp CEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEECTT--SCSSSSEEEEECTTSCEEEEECSCHHH
T ss_pred ceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEECCC--CCCCCcEEEEEcCCCCEEEEECCCHHH
Confidence 34457999999999999993 66899999999999877533 346789999998888999999999999
Q ss_pred HHHHHHHHHHhhhh
Q psy4640 90 MIQWMNALSLASIL 103 (109)
Q Consensus 90 ~~~Wi~aI~~a~~~ 103 (109)
|++||+||+.|+..
T Consensus 112 ~~~Wi~aI~~~i~~ 125 (129)
T 2p0d_A 112 LRAWHRALRTVIER 125 (129)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998753
No 12
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.85 E-value=7.7e-21 Score=123.89 Aligned_cols=85 Identities=40% Similarity=0.520 Sum_probs=71.6
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
++-|+||+++.|+||+++.+..|.|.|+|.+|+|..+.+....+++|+|.|.+++.|+|+|+|+|++|+++||++|+.|+
T Consensus 29 kkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 108 (123)
T 1upq_A 29 KRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRAS 108 (123)
T ss_dssp EEEEEEEETTEEEEESSTTCCSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred eeEEEEEeCCEEEEECCCCCcccceEEECCCCEEEECCCCccCCCcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHH
Confidence 33489999999999999999999999999999988765433345789999988877999999999999999999999998
Q ss_pred hhccC
Q psy4640 102 ILQNS 106 (109)
Q Consensus 102 ~~~~~ 106 (109)
.....
T Consensus 109 ~~~~~ 113 (123)
T 1upq_A 109 RAEGD 113 (123)
T ss_dssp C----
T ss_pred hcccC
Confidence 76543
No 13
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.84 E-value=2.9e-20 Score=119.82 Aligned_cols=86 Identities=21% Similarity=0.239 Sum_probs=71.8
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeC-------CceEEEEEcCCHHHHHHHH
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA-------NMRTYYFAADTRESMIQWM 94 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~-------~~r~y~fsA~s~~e~~~Wi 94 (109)
++-|+||+++.|+||+++.+..|.|.|+|.+|+|..+.+.....++|+|+|.++ ..|+|+|+|+|++|+++||
T Consensus 25 k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi 104 (118)
T 1v89_A 25 QQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWV 104 (118)
T ss_dssp EEEEEEEETTEEEEESSSSCCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHH
T ss_pred cEEEEEEECCEEEEEeCCCCCCceEEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHH
Confidence 334899999999999999999999999999999865543222356899999873 6799999999999999999
Q ss_pred HHHHHhhhhccCC
Q psy4640 95 NALSLASILQNSS 107 (109)
Q Consensus 95 ~aI~~a~~~~~~~ 107 (109)
++|+.|+....+.
T Consensus 105 ~al~~~~~~~~~s 117 (118)
T 1v89_A 105 KFLRRVAGSGPSS 117 (118)
T ss_dssp HHHHHHHHCCSCC
T ss_pred HHHHHHHccCCCC
Confidence 9999998755443
No 14
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.82 E-value=6.1e-20 Score=121.63 Aligned_cols=82 Identities=15% Similarity=0.077 Sum_probs=70.0
Q ss_pred ccCCceEEeeCCeEEEEcCCCCC------------cccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCH
Q psy4640 20 VGSDLDSIGSRNGLAVTDRFEEE------------KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTR 87 (109)
Q Consensus 20 ~~~~~~~vL~~~~L~yyk~~~d~------------~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~ 87 (109)
-++..|+||+++.|+|||++.+. .|.+.|+|.+|.|..+. .+..+++|+|+|.+++.++|+|+|+|+
T Consensus 30 ~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~-~d~~krk~vF~l~t~~~~~ylfqA~s~ 108 (124)
T 3pp2_A 30 HWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAP-KDKSSRKNVLELRSRDGSEYLIQHDSE 108 (124)
T ss_dssp CCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECC-GGGCSSSSEEEEECTTSCEEEEECSCH
T ss_pred CceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEecc-cccCCCceEEEEECCCCCEEEEECCCH
Confidence 34456899999999999998764 58899999999988764 123478999999988889999999999
Q ss_pred HHHHHHHHHHHHhhh
Q psy4640 88 ESMIQWMNALSLASI 102 (109)
Q Consensus 88 ~e~~~Wi~aI~~a~~ 102 (109)
+||++||++|+.|++
T Consensus 109 ~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 109 AIISTWHKAIAQGIQ 123 (124)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
No 15
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.82 E-value=9.4e-20 Score=122.19 Aligned_cols=83 Identities=12% Similarity=0.036 Sum_probs=70.6
Q ss_pred cCCceEEeeCCeEEEEcCCC---------CCcccEEEEcCCeEEeecCCCCcccceeeEEEeeC-CceEEEEEcCCHHHH
Q psy4640 21 GSDLDSIGSRNGLAVTDRFE---------EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA-NMRTYYFAADTRESM 90 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~~---------d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~-~~r~y~fsA~s~~e~ 90 (109)
+++.|+||++++||||+... +.+|.|.|+|+|+.|+.++. .+++++|.|.++ .+..|.|+|+|++++
T Consensus 24 Wkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~~~e~---~~~~~~F~L~~~~~G~~Y~fqA~s~~~~ 100 (126)
T 2dtc_A 24 WTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQLPDD---PEHPDIFQLNNPDKGNVYKFQTGSRFHA 100 (126)
T ss_dssp CEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEECCCC---TTSTTEEEEECTTSCSEEEEECSSHHHH
T ss_pred cccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEEecCC---CCCCCEEEEeeCCCCCEEEEeCCCHHHH
Confidence 45578999999999999764 66899999999999984333 467899999876 568899999999999
Q ss_pred HHHHHHHHHhhhhccC
Q psy4640 91 IQWMNALSLASILQNS 106 (109)
Q Consensus 91 ~~Wi~aI~~a~~~~~~ 106 (109)
++||+||+.|+....+
T Consensus 101 ~~W~~ai~~a~~~~~~ 116 (126)
T 2dtc_A 101 ILWHKHLDDACKSSRP 116 (126)
T ss_dssp HHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHhcCCC
Confidence 9999999999976543
No 16
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.82 E-value=1e-19 Score=115.46 Aligned_cols=82 Identities=16% Similarity=0.220 Sum_probs=70.3
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCC-CCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHh
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSS-DDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 100 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~-~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a 100 (109)
++-|+||+++.|+||+++.+..|.|.|+|.+++|..++. ....+++++|.|.+++.|+|+|+|+|++|+++||++|+.|
T Consensus 24 k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~ 103 (108)
T 1u5d_A 24 QKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFL 103 (108)
T ss_dssp EEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSCCEEEECSSHHHHHHHHHHHHHH
T ss_pred eeeEEEEeCCEEEEecCCCCCCCCEEEEecceEEEeCCccccccCCcceEEEEcCCCcEEEEECCCHHHHHHHHHHHHHH
Confidence 335899999999999999999999999999999876532 1223668999999887799999999999999999999998
Q ss_pred hhh
Q psy4640 101 SIL 103 (109)
Q Consensus 101 ~~~ 103 (109)
+..
T Consensus 104 i~~ 106 (108)
T 1u5d_A 104 LKD 106 (108)
T ss_dssp HHH
T ss_pred HHh
Confidence 754
No 17
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.82 E-value=2.5e-20 Score=123.40 Aligned_cols=83 Identities=18% Similarity=0.230 Sum_probs=67.0
Q ss_pred cCCceEEeeCCeEEEEcCCCC---------CcccEEEEcCCeEEeecCCCCcccceeeEEEeeCC--ceEEEEEcCCHHH
Q psy4640 21 GSDLDSIGSRNGLAVTDRFEE---------EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN--MRTYYFAADTRES 89 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~~d---------~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~--~r~y~fsA~s~~e 89 (109)
+++-|+||++++|+||+++.+ ..+.|.|+|.+|+|..+.+ +..+++|+|+|.+++ .++|+|+|+|.+|
T Consensus 28 Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~-~~~~k~~~F~I~~~~~~~~~~~~~A~s~ee 106 (124)
T 2w2x_D 28 WTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQ-GKNQKSFVFILEPKQQGDPPVEFATDKVEE 106 (124)
T ss_dssp EEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTT-CBTTBSEEEEEEECC--CCCEEEEECCCHH
T ss_pred ceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEEccC-CcCCCCEEEEEECCCCCCceEEEEECCHHH
Confidence 344589999999999997532 3458999999999887654 234678999998765 4789999999999
Q ss_pred HHHHHHHHHHhhhhc
Q psy4640 90 MIQWMNALSLASILQ 104 (109)
Q Consensus 90 ~~~Wi~aI~~a~~~~ 104 (109)
+++||+||+.|+...
T Consensus 107 ~~~Wi~ai~~a~~~~ 121 (124)
T 2w2x_D 107 LFEWFQSIREITWKI 121 (124)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988654
No 18
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.81 E-value=2.8e-19 Score=115.23 Aligned_cols=82 Identities=17% Similarity=0.189 Sum_probs=70.1
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
++-|+||+++.|+||+++.+..|.|.|+|.++++...... ..+++++|.|.+++.|+|+|+|+|++|+++||++|+.|+
T Consensus 22 k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~-~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~ 100 (113)
T 1pls_A 22 KPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQD-FGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAI 100 (113)
T ss_dssp EEEEEEEETTEEEEESSTTCSSCSEEEESSSCCEESSCCS-SCCSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred eEEEEEEECCEEEEEeCCCCCCcceEEEcCCCEEEEecCC-CCCCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 3348999999999999999999999999999986542221 236789999998877999999999999999999999998
Q ss_pred hhc
Q psy4640 102 ILQ 104 (109)
Q Consensus 102 ~~~ 104 (109)
...
T Consensus 101 ~~~ 103 (113)
T 1pls_A 101 KCI 103 (113)
T ss_dssp HHH
T ss_pred hcc
Confidence 665
No 19
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.81 E-value=1.2e-19 Score=124.58 Aligned_cols=84 Identities=7% Similarity=-0.063 Sum_probs=68.8
Q ss_pred cCCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHh
Q psy4640 21 GSDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 100 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a 100 (109)
+++-|+||++++||||+++.+..+.|.|+|.++++....... .++.++|+|.+++ |+|+|+|+|++||++||+||+.+
T Consensus 34 WkrRWFvLk~~~L~Yyk~~~d~~~~g~I~L~~~~~~~~~~~~-~~~~~~F~I~t~~-r~~~f~A~s~ee~~eWi~aI~~v 111 (149)
T 1x1f_A 34 YEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLTEQNST-EKNCAKFTLVLPK-EEVQLKTENTESGEEWRGFILTV 111 (149)
T ss_dssp CEEEEEEEETTEEEEESCSSCSSCSEECCCSSCCEEEECCCT-TSCCCEEEEECSS-CCEEEECSSHHHHHHHHHHHHHH
T ss_pred ceeEEEEEcCCEEEEEeCCCccccCcEEECCCceEEeeccCC-CCcCcEEEEEcCC-CEEEEEcCCHHHHHHHHHHHHHH
Confidence 344589999999999999999999999999998765322211 2356899998775 89999999999999999999998
Q ss_pred hhhccC
Q psy4640 101 SILQNS 106 (109)
Q Consensus 101 ~~~~~~ 106 (109)
+....|
T Consensus 112 ~~~~~p 117 (149)
T 1x1f_A 112 TELSVP 117 (149)
T ss_dssp HHSSCC
T ss_pred HcccCC
Confidence 875544
No 20
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.81 E-value=1e-19 Score=119.28 Aligned_cols=85 Identities=19% Similarity=0.153 Sum_probs=69.4
Q ss_pred cCCceEEeeCCeEEEEcCCCCCc------ccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHH
Q psy4640 21 GSDLDSIGSRNGLAVTDRFEEEK------LLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWM 94 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~~d~~------p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi 94 (109)
+++.|+||+++.|+||+++.+.. +...|+|.+|.+..+.+ ..+++|+|+|.+++.++|+|+|+|++||++||
T Consensus 32 Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~--~~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi 109 (123)
T 1wjm_A 32 WQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFD--YRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWL 109 (123)
T ss_dssp CEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECTT--CSSCSSEEEEECSSSCEEEEECSSHHHHHHHH
T ss_pred ccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEEeeccc--ccCCCCEEEEEEcCCcEEEEECCCHHHHHHHH
Confidence 44468999999999999886532 34578888888876544 24678999999887799999999999999999
Q ss_pred HHHHHhhhhccCC
Q psy4640 95 NALSLASILQNSS 107 (109)
Q Consensus 95 ~aI~~a~~~~~~~ 107 (109)
+||+.|+....+.
T Consensus 110 ~ai~~~~~~~~~~ 122 (123)
T 1wjm_A 110 RVVNAAIASGPSS 122 (123)
T ss_dssp HHHHHHHHHCCCC
T ss_pred HHHHHHHhccCCC
Confidence 9999998765554
No 21
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.81 E-value=2.3e-19 Score=119.08 Aligned_cols=81 Identities=19% Similarity=0.199 Sum_probs=64.7
Q ss_pred CCceEEeeCCeEEEEcCCC---CCcccEEEEcCCeEEeecCCCCc------ccceeeEEEeeCC------ceEEEEEcCC
Q psy4640 22 SDLDSIGSRNGLAVTDRFE---EEKLLGSILLPSYKISPCSSDDK------VFRKFSFKAEHAN------MRTYYFAADT 86 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~---d~~p~G~I~L~~~~V~~~~~~~~------~~k~~~F~i~~~~------~r~y~fsA~s 86 (109)
++-|+||++++|+|||++. +..|.|+|+|++|+|.....++. ..+.+.|.|...+ .++|+|+|+|
T Consensus 23 ~~rwfVL~~~~L~yyK~~~~~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s 102 (120)
T 4a6h_A 23 SKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADS 102 (120)
T ss_dssp EEEEEEECSSEEEEESSCCTTTCCSCSEEEEGGGEEEEEECCCCC---------CCEEEEEESSSSSSCTTCEEEEECSS
T ss_pred ccEEEEEeCCEEEEEcCCCcCcCCCceEEEECCCCEEEEcccccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCC
Confidence 3348999999999999875 66799999999999987554321 0156788887654 3699999999
Q ss_pred HHHHHHHHHHHHHhhh
Q psy4640 87 RESMIQWMNALSLASI 102 (109)
Q Consensus 87 ~~e~~~Wi~aI~~a~~ 102 (109)
.+||++||++|+.++.
T Consensus 103 ~~e~~~Wv~aI~~~~~ 118 (120)
T 4a6h_A 103 YESMMSWFDNLKILTS 118 (120)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999863
No 22
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.80 E-value=3.4e-19 Score=116.24 Aligned_cols=80 Identities=16% Similarity=0.128 Sum_probs=68.9
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCC---------------------ceEE
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN---------------------MRTY 80 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~---------------------~r~y 80 (109)
++-|+||+++.|+||+++.+.+|.|.|+|.+|+|..+.+ .+++++|.|.+++ .|+|
T Consensus 22 k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~---~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~ 98 (127)
T 1fgy_A 22 KRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVLD---PRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVY 98 (127)
T ss_dssp EEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEEECC---SSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEE
T ss_pred EEEEEEEECCEEEEeCCCCCCCcceEEECCceEEEEccC---CCCCceEEEecCCccccccccccccCCcceecCCceEE
Confidence 335899999999999999999999999999998876654 2568999998653 3799
Q ss_pred EEEcCCHHHHHHHHHHHHHhhhhc
Q psy4640 81 YFAADTRESMIQWMNALSLASILQ 104 (109)
Q Consensus 81 ~fsA~s~~e~~~Wi~aI~~a~~~~ 104 (109)
+|+|+|++|+++||++|+.|+...
T Consensus 99 ~l~a~s~~e~~~Wi~al~~~i~~~ 122 (127)
T 1fgy_A 99 RISAPSPEEKEEWMKSIKASISRD 122 (127)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCHHHHHHHHHHHHHHhccC
Confidence 999999999999999999987543
No 23
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.80 E-value=3.7e-19 Score=113.48 Aligned_cols=80 Identities=24% Similarity=0.290 Sum_probs=66.5
Q ss_pred CCceEEeeCC--eEEEEcCCCCCcccEEEEcCCeEEeecCCC-C--cccceeeEEEeeCCceEEEEEcCCHHHHHHHHHH
Q psy4640 22 SDLDSIGSRN--GLAVTDRFEEEKLLGSILLPSYKISPCSSD-D--KVFRKFSFKAEHANMRTYYFAADTRESMIQWMNA 96 (109)
Q Consensus 22 ~~~~~vL~~~--~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~-~--~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~a 96 (109)
++-|+||+++ .|+||+++.+..|.|.|+|.+|+|..+... + ..+++++|.|.+++.++|+|+|+|++|+++||+|
T Consensus 24 k~R~fvL~~~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~a 103 (109)
T 2i5f_A 24 KVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKA 103 (109)
T ss_dssp EEEEEEEETTTTEEEEECTTSCSSCSEEEECTTCEEEEECC--------CCSEEEEECTTCCEEEEECSSHHHHHHHHHH
T ss_pred eEEEEEEeCCCcEEEEECCCCCCCccEEEECCCCEEEEccCCcccccCCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHH
Confidence 3348999986 999999999999999999999987654331 1 1236899999988878999999999999999999
Q ss_pred HHHhh
Q psy4640 97 LSLAS 101 (109)
Q Consensus 97 I~~a~ 101 (109)
|+.|+
T Consensus 104 i~~~~ 108 (109)
T 2i5f_A 104 IQMAS 108 (109)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99986
No 24
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.80 E-value=5e-19 Score=113.60 Aligned_cols=80 Identities=18% Similarity=0.108 Sum_probs=67.0
Q ss_pred CCceEEeeCCeEEEEcCCCC-CcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHh
Q psy4640 22 SDLDSIGSRNGLAVTDRFEE-EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 100 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d-~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a 100 (109)
++-|+||+++.|+||+++.+ ..+.+.|+|.+|.|....+ .+++|+|.|.+++.|+|+|+|+|++|+++||+||+.|
T Consensus 23 k~RwfvL~~~~L~yyk~~~~~~~~~~~i~l~~~~v~~~~~---~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~ 99 (107)
T 2cof_A 23 KSRWCSVRDNHLHFYQDRNRSKVAQQPLSLVGCEVVPDPS---PDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSE 99 (107)
T ss_dssp EEEEEEECSSCEEEECSSTTCSEEEEEECTTTCEEECCCB---TTBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred ceEEEEEECCEEEEEeCCcccCCCeeEEeccceEEEECCC---CCCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHH
Confidence 33479999999999998864 5677788888998876543 3678999999887899999999999999999999998
Q ss_pred hhhc
Q psy4640 101 SILQ 104 (109)
Q Consensus 101 ~~~~ 104 (109)
+...
T Consensus 100 ~~~~ 103 (107)
T 2cof_A 100 SGSG 103 (107)
T ss_dssp SSCS
T ss_pred HcCC
Confidence 7544
No 25
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.79 E-value=6.2e-19 Score=115.94 Aligned_cols=82 Identities=23% Similarity=0.263 Sum_probs=69.4
Q ss_pred CceEEeeCC--eEEEEcCCCCCcccEEEEcCCeEEeecCCC-C--cccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHH
Q psy4640 23 DLDSIGSRN--GLAVTDRFEEEKLLGSILLPSYKISPCSSD-D--KVFRKFSFKAEHANMRTYYFAADTRESMIQWMNAL 97 (109)
Q Consensus 23 ~~~~vL~~~--~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~-~--~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI 97 (109)
+-|+||+++ +|+||+++.+..|.|.|+|.+|+|..+... + ..+++++|.|.+++.|+|+|+|+|++|+++||+||
T Consensus 36 ~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al 115 (129)
T 1x05_A 36 VRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAI 115 (129)
T ss_dssp EEEEEEEETTTEEEEECSSCCSSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTTCCCCEEECSSHHHHHHHHHHH
T ss_pred eEEEEEeCCCCEEEEECCCCCCcceeEEEccCCEEEEccCCccccccCCCeEEEEEcCCCCEEEEECCCHHHHHHHHHHH
Confidence 347899976 999999999999999999999988765332 1 12368999999887789999999999999999999
Q ss_pred HHhhhhc
Q psy4640 98 SLASILQ 104 (109)
Q Consensus 98 ~~a~~~~ 104 (109)
+.|+...
T Consensus 116 ~~~~~~~ 122 (129)
T 1x05_A 116 QMASRTG 122 (129)
T ss_dssp HHHHTCC
T ss_pred HHHHHcc
Confidence 9998655
No 26
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.79 E-value=7.1e-19 Score=111.61 Aligned_cols=76 Identities=16% Similarity=0.137 Sum_probs=65.7
Q ss_pred ceEEeeCCeEEEEcCCCC--CcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 24 LDSIGSRNGLAVTDRFEE--EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 24 ~~~vL~~~~L~yyk~~~d--~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
-|+||+++.|+||+++.+ ..|.|.|+|.+|.|...+. ++++|.|.+++.|+|+|+|+|++|+++||++|+.|+
T Consensus 18 R~fvL~~~~L~Yy~~~~~~~~~~~g~i~L~~~~v~~~~~-----~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 92 (103)
T 3rcp_A 18 RWFVLDNGILSYYDSQDDVCKGSKGSIKMAVCEIKVHSA-----DNTRMELIIPGEQHFYMKAVNAAERQRWLVALGSSK 92 (103)
T ss_dssp EEEEEETTEEEEESSCC---CCCSCEEEGGGCEEECCTT-----CSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHTTS
T ss_pred eEEEEECCEEEEEecCCcccCCcccEEEeeeeEEEEcCC-----CCceEEEEeCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 379999999999999985 4699999999999876433 367999998878999999999999999999999988
Q ss_pred hhc
Q psy4640 102 ILQ 104 (109)
Q Consensus 102 ~~~ 104 (109)
...
T Consensus 93 ~~~ 95 (103)
T 3rcp_A 93 ASL 95 (103)
T ss_dssp CCC
T ss_pred Hhc
Confidence 654
No 27
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=4.4e-19 Score=116.04 Aligned_cols=78 Identities=17% Similarity=0.137 Sum_probs=67.2
Q ss_pred CCceEEeeCC--eEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHH
Q psy4640 22 SDLDSIGSRN--GLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 99 (109)
Q Consensus 22 ~~~~~vL~~~--~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~ 99 (109)
++-|+||+++ .|+||+++.+..|.|.|+|.++++..... .++++|.|.++ .|+|+|+|+|++|+++||++|+.
T Consensus 27 kkRwfvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~~~~~~----~~~~~F~i~~~-~r~~~l~a~s~~e~~~Wi~al~~ 101 (119)
T 2dhk_A 27 KSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAVFDCKAD----AEEGIFEIKTP-SRVITLKAATKQAMLYWLQQLQM 101 (119)
T ss_dssp EEEEEEEETTTTEEEEESSTTCCSCSEEEEGGGCEEEECTT----GGGCEEEEECS-SCCEEEECSSHHHHHHHHHHHHH
T ss_pred eeEEEEEECCccEEEEECCCCCcccccEEECCCCEEEecCC----CCCCEEEEEeC-CcEEEEECCCHHHHHHHHHHHHH
Confidence 3347999999 99999999999999999999988654322 45789999877 59999999999999999999999
Q ss_pred hhhhc
Q psy4640 100 ASILQ 104 (109)
Q Consensus 100 a~~~~ 104 (109)
|+...
T Consensus 102 ~~~~~ 106 (119)
T 2dhk_A 102 KRWEF 106 (119)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98654
No 28
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=7.6e-19 Score=118.92 Aligned_cols=83 Identities=17% Similarity=0.159 Sum_probs=70.0
Q ss_pred ccCCceEEeeCCeEEEEcCCCCC--cccEEEEcCCeEEeecCCCCcccceeeEEEeeC---CceEEEEEcCCHHHHHHHH
Q psy4640 20 VGSDLDSIGSRNGLAVTDRFEEE--KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA---NMRTYYFAADTRESMIQWM 94 (109)
Q Consensus 20 ~~~~~~~vL~~~~L~yyk~~~d~--~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~---~~r~y~fsA~s~~e~~~Wi 94 (109)
..++-|+||+++.|+|||++.+. +|.|.|+|+||+|++.... ..++|.|+|..| +.|+|+|.|||++++.+||
T Consensus 27 ~~KrrWFvlk~~~L~YyK~kee~~~ePig~I~L~gceV~pd~~~--~~~kf~ikl~iPs~~g~r~y~l~cdsEeqy~~WM 104 (137)
T 2ys3_A 27 GYRQHWVVFKETTLSYYKSQDEAPGDPIQQLNLKGCEVVPDVNV--SGQKFCIKLLVPSPEGMSEIYLRCQDEQQYARWM 104 (137)
T ss_dssp SSCCCEEEECSSCEEEESSTTTTTSCCSCCBCTTTCEEEECCBG--GGTBEEEEEEEECSSSEEEEEEEESSHHHHHHHH
T ss_pred cceeEEEEEeCCEEEEECCchhccCCCceEEECCCCEEeccccc--cCCceEEEEEccCCCCceEEEEECCCHHHHHHHH
Confidence 33456899999999999998886 8999999999998765321 356899888654 5699999999999999999
Q ss_pred HHHHHhhhhc
Q psy4640 95 NALSLASILQ 104 (109)
Q Consensus 95 ~aI~~a~~~~ 104 (109)
+|++.|++..
T Consensus 105 aA~rlAskgk 114 (137)
T 2ys3_A 105 AGCRLASKGR 114 (137)
T ss_dssp HHHHHHHTSC
T ss_pred HHHHHhccCc
Confidence 9999999764
No 29
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.79 E-value=1.1e-18 Score=117.67 Aligned_cols=83 Identities=12% Similarity=0.139 Sum_probs=69.8
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCC-CcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHh
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSD-DKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 100 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~-~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a 100 (109)
++-|+||+++.|+||+++.+..|.|.|+|.+++|..+... ...+++++|.|.+++.|+|+|+|+|++|+++||++|+.|
T Consensus 38 kkR~fvL~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 117 (148)
T 1u5f_A 38 QKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFI 117 (148)
T ss_dssp EEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred eeEEEEEECCEEEEEcCCCCcccceEEEcCCcEEEECCCcccCCCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHH
Confidence 3347999999999999999999999999999988765431 123567999999887799999999999999999999999
Q ss_pred hhhc
Q psy4640 101 SILQ 104 (109)
Q Consensus 101 ~~~~ 104 (109)
+...
T Consensus 118 i~~~ 121 (148)
T 1u5f_A 118 LQDL 121 (148)
T ss_dssp CC--
T ss_pred HHHh
Confidence 8654
No 30
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.78 E-value=1.2e-19 Score=119.19 Aligned_cols=82 Identities=17% Similarity=0.116 Sum_probs=68.6
Q ss_pred cccCCceEEeeCCeEEEEcCCCCCcc--------cEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHH
Q psy4640 19 SVGSDLDSIGSRNGLAVTDRFEEEKL--------LGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESM 90 (109)
Q Consensus 19 ~~~~~~~~vL~~~~L~yyk~~~d~~p--------~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~ 90 (109)
.-++..|+||+++.|+||+++.+..+ .+.|+|.+|.|..+.+ ..+++|+|+|.+++.++|+|+|+|++||
T Consensus 30 ~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d--~~kr~~~F~l~t~~~~~~lfqA~s~~e~ 107 (122)
T 1dro_A 30 RSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASD--YTKKKHVLRVKLANGALFLLQAHDDTEM 107 (122)
T ss_dssp CCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCS--SSSSTTEEEEECSSSCEEEEECSSSHHH
T ss_pred CCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEEEeCCC--CCCCCeEEEEEEcCCCEEEEECCCHHHH
Confidence 34455689999999999999987654 4789999998776543 3467899999977779999999999999
Q ss_pred HHHHHHHHHhhh
Q psy4640 91 IQWMNALSLASI 102 (109)
Q Consensus 91 ~~Wi~aI~~a~~ 102 (109)
++||+||+.|+.
T Consensus 108 ~~Wi~ai~~~i~ 119 (122)
T 1dro_A 108 SQWVTSLKAQSD 119 (122)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 999999999875
No 31
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.78 E-value=1.1e-18 Score=113.74 Aligned_cols=83 Identities=25% Similarity=0.313 Sum_probs=69.2
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCCeE-EeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHh
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 100 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~-V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a 100 (109)
++-|+||+++.|+||+++.+.+|.|.|+|.++. |..+...+...++++|.|.++ .|+|+|+|+|++|+++||++|+.|
T Consensus 31 k~R~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~-~r~~~l~a~s~~e~~~W~~al~~~ 109 (125)
T 1eaz_A 31 KRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTT-SRTFYVQADSPEEMHSWIKAVSGA 109 (125)
T ss_dssp EEEEEEECSSEEEEESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECS-SCEEEEECSSHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCEEEEEcCCCCCcceeEEEcccceEEeeccccccCCcCCEEEEEeC-CcEEEEEcCCHHHHHHHHHHHHHH
Confidence 334799999999999999999999999999885 555433223356899999876 489999999999999999999999
Q ss_pred hhhcc
Q psy4640 101 SILQN 105 (109)
Q Consensus 101 ~~~~~ 105 (109)
+....
T Consensus 110 i~~~~ 114 (125)
T 1eaz_A 110 IVAQR 114 (125)
T ss_dssp HHHTC
T ss_pred HHhcc
Confidence 87653
No 32
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.78 E-value=1.1e-18 Score=117.64 Aligned_cols=78 Identities=21% Similarity=0.210 Sum_probs=68.3
Q ss_pred CCceEEeeCC-----eEEEEcCCC-CCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHH
Q psy4640 22 SDLDSIGSRN-----GLAVTDRFE-EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMN 95 (109)
Q Consensus 22 ~~~~~vL~~~-----~L~yyk~~~-d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~ 95 (109)
++-|+||+++ .|+||+++. +..|.|.|+|.+|++....+ .+++|+|.|.+++.|+|+|+|+|++|+++||.
T Consensus 41 k~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~~~~~~~~~---~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~ 117 (150)
T 1wg7_A 41 KRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQNN---KVRRFAFELKMQDKSSYLLAADSEVEMEEWIT 117 (150)
T ss_dssp EEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTCCEECCCC---SSCTTEEEEECSSSCEEEEECSSHHHHHHHHH
T ss_pred eEEEEEEecCCCCceEEEEECCCCCCCCcCcEEecccCEEEecCC---CCCceEEEEEeCCCcEEEEEeCCHHHHHHHHH
Confidence 4447999997 999999988 88999999999998776543 35689999998877999999999999999999
Q ss_pred HHHHhhh
Q psy4640 96 ALSLASI 102 (109)
Q Consensus 96 aI~~a~~ 102 (109)
+|+.|+.
T Consensus 118 al~~ai~ 124 (150)
T 1wg7_A 118 ILNKILQ 124 (150)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 33
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.78 E-value=1.3e-18 Score=110.44 Aligned_cols=79 Identities=16% Similarity=0.154 Sum_probs=65.2
Q ss_pred ccCCceEEeeCCeEEEEcCCCC----C--cccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHH
Q psy4640 20 VGSDLDSIGSRNGLAVTDRFEE----E--KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQW 93 (109)
Q Consensus 20 ~~~~~~~vL~~~~L~yyk~~~d----~--~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~W 93 (109)
.+++-|+||+++.|+||+++.+ . .+.+.|+|.++.|..+.+ ..+++|+|+|.+++.|+|+|+|+|++||++|
T Consensus 22 ~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~--~~~~~~~F~i~~~~~~~~~~~A~s~~e~~~W 99 (106)
T 1btn_A 22 SWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALD--YKKKKHVFKLRLSDGNEYLFQAKDDEEMNTW 99 (106)
T ss_dssp CCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEECSS--CCSSSSEEEEECTTSCEEEEECSSHHHHHHH
T ss_pred ChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEEEccc--ccCCccEEEEEecCCCEEEEECCCHHHHHHH
Confidence 3444689999999999998863 2 367789999988766543 2467899999987779999999999999999
Q ss_pred HHHHHHh
Q psy4640 94 MNALSLA 100 (109)
Q Consensus 94 i~aI~~a 100 (109)
|+||+.|
T Consensus 100 i~ai~~A 106 (106)
T 1btn_A 100 IQAISSA 106 (106)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9999976
No 34
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.77 E-value=2.5e-18 Score=112.57 Aligned_cols=77 Identities=18% Similarity=0.069 Sum_probs=66.5
Q ss_pred CceEEeeCCeEEEEcCCCCCcccEEEEcCCeE-EeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 23 DLDSIGSRNGLAVTDRFEEEKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 23 ~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~-V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
+-|+||+++.|+||+++.+..|.|.|+|.+|. |..... .+++++|.|.+++ |+|+|+|+|++|+++||++|+.|+
T Consensus 36 ~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~---~~~~~~F~i~~~~-r~~~l~a~s~~e~~~Wi~al~~~i 111 (126)
T 1fao_A 36 TRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYS---QERVNCFCLVFPF-RTFYLCAKTGVEADEWIKILRWKL 111 (126)
T ss_dssp EEEEEEETTEEEEESSTTCSSCSEEEEGGGCCEEEEECS---SSSSSEEEEEETT-EEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cEEEEEECCEEEEeCCCCCCCceeEEEccceEEEEeccc---CCCCCEEEEEeCC-cEEEEECCCHHHHHHHHHHHHHHH
Confidence 34799999999999999999999999999997 444322 3568999999875 999999999999999999999987
Q ss_pred hh
Q psy4640 102 IL 103 (109)
Q Consensus 102 ~~ 103 (109)
..
T Consensus 112 ~~ 113 (126)
T 1fao_A 112 SQ 113 (126)
T ss_dssp HT
T ss_pred HH
Confidence 55
No 35
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.77 E-value=3.3e-18 Score=110.27 Aligned_cols=82 Identities=18% Similarity=0.164 Sum_probs=66.1
Q ss_pred CCceEEee--CCeEEEEcCCCCCcccEEEEcCCeEEee-cCCC----CcccceeeEEEeeCCceEEEEEcCCHHHHHHHH
Q psy4640 22 SDLDSIGS--RNGLAVTDRFEEEKLLGSILLPSYKISP-CSSD----DKVFRKFSFKAEHANMRTYYFAADTRESMIQWM 94 (109)
Q Consensus 22 ~~~~~vL~--~~~L~yyk~~~d~~p~G~I~L~~~~V~~-~~~~----~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi 94 (109)
++-|+||+ ++.|+||+++.+..|.|.|+|.++.+.. ..+. +...++++|.|.++ .|+|+|+|+|++|+++||
T Consensus 25 k~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~~-~r~~~l~a~s~~e~~~Wi 103 (117)
T 1v5u_A 25 KARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTT-RRVYNFCAQDVPSAQQWV 103 (117)
T ss_dssp EEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEES-SCEEEEECSSHHHHHHHH
T ss_pred eeeEEEEECCCCEEEEeecCCCCccceEEEccCcEEEeecCccccccccCCCCeEEEEECC-CceEEEECCCHHHHHHHH
Confidence 33479999 8899999999999999999999987433 2211 11245689999766 489999999999999999
Q ss_pred HHHHHhhhhc
Q psy4640 95 NALSLASILQ 104 (109)
Q Consensus 95 ~aI~~a~~~~ 104 (109)
++|+.|+...
T Consensus 104 ~al~~~i~~~ 113 (117)
T 1v5u_A 104 DRIQSCLSSG 113 (117)
T ss_dssp HHHHTTCCCC
T ss_pred HHHHHHhccC
Confidence 9999987543
No 36
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=1.8e-18 Score=114.95 Aligned_cols=81 Identities=14% Similarity=0.046 Sum_probs=65.3
Q ss_pred CceEEe-eCCeEEEEcCCCCCcccEEEEcC-Ce-EEee------cCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHH
Q psy4640 23 DLDSIG-SRNGLAVTDRFEEEKLLGSILLP-SY-KISP------CSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQW 93 (109)
Q Consensus 23 ~~~~vL-~~~~L~yyk~~~d~~p~G~I~L~-~~-~V~~------~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~W 93 (109)
+-|+|| ++++|+||+++.+..+.|.|.|. .+ .|.. +...+..+++++|.|.+++.|+|+|+|+|++||++|
T Consensus 26 kRwFVL~~~~~L~Yyk~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~F~I~~~~~r~~~l~A~s~~e~~~W 105 (130)
T 2d9v_A 26 RNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAW 105 (130)
T ss_dssp EEEEEEETTTEEEEESSSSTTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTEEEEEETTSCEEEEECSSHHHHHHH
T ss_pred eeEEEEccCCEEEEEeCCCCCCcCceEecccceeEEeccccccccCCCCCCCcCcEEEEEeCCCCEEEEEcCCHHHHHHH
Confidence 348999 89999999999988999999886 44 2321 222223356799999987779999999999999999
Q ss_pred HHHHHHhhhh
Q psy4640 94 MNALSLASIL 103 (109)
Q Consensus 94 i~aI~~a~~~ 103 (109)
|+||+.|+..
T Consensus 106 i~al~~a~~~ 115 (130)
T 2d9v_A 106 KTALMEANST 115 (130)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHcC
Confidence 9999998754
No 37
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=3e-18 Score=110.15 Aligned_cols=80 Identities=15% Similarity=0.146 Sum_probs=67.8
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCCe-EEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHh
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSY-KISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 100 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~-~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a 100 (109)
++-|+||+++.|+||+++.+..|.|.|+|.++ .|..+++. ..++++|.|.+++ |+|+|+|+|++|+++||++|+.|
T Consensus 25 k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~--~~~~~~F~i~~~~-r~~~l~a~s~~e~~~Wi~ai~~~ 101 (115)
T 2dn6_A 25 TERWFVLKPNIISYYVSEDLKDKKGDILLDENCCVESLPDK--DGKKCLFLVKCFD-KTFEISASDKKKKQEWIQAIHST 101 (115)
T ss_dssp EEEEEEECSSCEEEESSTTCSSEEEEECCCTTCEEEEECCC--TTCCSEEEEECSS-CEEEEECSSHHHHHHHHHHHHHH
T ss_pred EEeEEEEECCEEEEeCCCCCcccCcEEEecCcEEEEECCCC--CCCeeEEEEEeCC-CEEEEEcCCHHHHHHHHHHHHHH
Confidence 33489999999999999999999999999875 56665442 2567999998764 89999999999999999999999
Q ss_pred hhhc
Q psy4640 101 SILQ 104 (109)
Q Consensus 101 ~~~~ 104 (109)
+...
T Consensus 102 ~~~~ 105 (115)
T 2dn6_A 102 IHLL 105 (115)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8654
No 38
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.77 E-value=1.2e-18 Score=112.01 Aligned_cols=80 Identities=14% Similarity=0.136 Sum_probs=64.5
Q ss_pred CceEEe-eCCeEEEEcCCCCCcccEEEEcCCeEEe-----ecC---CCCcccceeeEEEeeCCceEEEEEcCCHHHHHHH
Q psy4640 23 DLDSIG-SRNGLAVTDRFEEEKLLGSILLPSYKIS-----PCS---SDDKVFRKFSFKAEHANMRTYYFAADTRESMIQW 93 (109)
Q Consensus 23 ~~~~vL-~~~~L~yyk~~~d~~p~G~I~L~~~~V~-----~~~---~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~W 93 (109)
+-|+|| +++.|+||+++.+.+|.|.|+|....|. .+. ..+...++++|.|.+++.|+|+|+|+|++|+++|
T Consensus 23 kR~fvL~~~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~W 102 (112)
T 3aj4_A 23 KNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAW 102 (112)
T ss_dssp EEEEEECTTSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEEEETTSCEEEEECSSHHHHHHH
T ss_pred ceEEEEeeCCEEEEEcCCCCCCCCccccccccceeecccccccccCCCCCCCcCcEEEEEecCCcEEEEEeCCHHHHHHH
Confidence 347999 8999999999999999999999764432 111 2222244789999888789999999999999999
Q ss_pred HHHHHHhhh
Q psy4640 94 MNALSLASI 102 (109)
Q Consensus 94 i~aI~~a~~ 102 (109)
|+||+.|..
T Consensus 103 i~al~~a~~ 111 (112)
T 3aj4_A 103 KFTLQDSRT 111 (112)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 999999863
No 39
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.77 E-value=2.3e-18 Score=127.33 Aligned_cols=81 Identities=10% Similarity=0.124 Sum_probs=68.2
Q ss_pred cCCceEEeeCCeEEEEcCC------CCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHH
Q psy4640 21 GSDLDSIGSRNGLAVTDRF------EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWM 94 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~------~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi 94 (109)
|++.|+||+++.|+|||++ .+..|.|.|+|.+|.|..+.+. .+++|+|.|.+++.++|+|+|+|++||++||
T Consensus 39 WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~--~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi 116 (263)
T 3a8p_A 39 WKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSVPEH--PKKEHVFCLSNSCGDVYLFQATSQTDLENWV 116 (263)
T ss_dssp CEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEECTTC--SSCSSEEEEECTTSCEEEEECSSHHHHHHHH
T ss_pred ceEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEECCcC--CCCCCEEEEEcCCCcEEEEEcCCHHHHHHHH
Confidence 4446899999999999984 5678999999999998765432 3678999999877799999999999999999
Q ss_pred HHHHHhhhh
Q psy4640 95 NALSLASIL 103 (109)
Q Consensus 95 ~aI~~a~~~ 103 (109)
+||+.|+..
T Consensus 117 ~aI~~a~~~ 125 (263)
T 3a8p_A 117 TAIHSACAS 125 (263)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998754
No 40
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.76 E-value=1.5e-18 Score=113.87 Aligned_cols=79 Identities=18% Similarity=0.215 Sum_probs=65.9
Q ss_pred ceEEee--CCeEEEEcCC-CCCcccEEEEcCCeEEeecCCC---Cc---ccceeeEEEeeCCceEEEEEcCCHHHHHHHH
Q psy4640 24 LDSIGS--RNGLAVTDRF-EEEKLLGSILLPSYKISPCSSD---DK---VFRKFSFKAEHANMRTYYFAADTRESMIQWM 94 (109)
Q Consensus 24 ~~~vL~--~~~L~yyk~~-~d~~p~G~I~L~~~~V~~~~~~---~~---~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi 94 (109)
-|+||+ +..|+||+++ .+.+|.|.|+|.+|+|..+.+. +. ..++++|.|.+++.|+|+|+|+|++|+++||
T Consensus 37 R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi 116 (129)
T 1x1g_A 37 RRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWI 116 (129)
T ss_dssp EEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEECCTTCCCEEECCSSHHHHHHHH
T ss_pred EEEEEeCCCCeEEEeCCCCcCCccceEEECcCCEEEEeCCCCCcccccCCCCCceEEEEcCCCCEEEEEcCCHHHHHHHH
Confidence 478999 4799999998 7889999999999987655432 00 1157999999887789999999999999999
Q ss_pred HHHHHhhh
Q psy4640 95 NALSLASI 102 (109)
Q Consensus 95 ~aI~~a~~ 102 (109)
++|+.|+.
T Consensus 117 ~al~~~~~ 124 (129)
T 1x1g_A 117 EAIKKLTS 124 (129)
T ss_dssp HHHHHHSS
T ss_pred HHHHHHHh
Confidence 99999874
No 41
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=1.1e-18 Score=114.04 Aligned_cols=76 Identities=17% Similarity=0.179 Sum_probs=64.8
Q ss_pred ceEEee--CCeEEEEcCCCCC--cccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHH
Q psy4640 24 LDSIGS--RNGLAVTDRFEEE--KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 99 (109)
Q Consensus 24 ~~~vL~--~~~L~yyk~~~d~--~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~ 99 (109)
-|+||+ ++.|+||+++.+. .|.|.|+|.+|+|.... .++++|.|.+++.|+|+|+|+|++|+++||++|+.
T Consensus 27 R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~~~v~~~~-----~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~ 101 (120)
T 2d9x_A 27 RFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAVISPSD-----EDSHTFTVNAASGEQYKLRATDAKERQHWVSRLQI 101 (120)
T ss_dssp EEEEECTTTCEEEEESSGGGSSSCCSEEEECTTCCEECCS-----SSSSCEEECCSSSCCEEECCSSHHHHHHHHHHHHH
T ss_pred EEEEEECCCCEEEEEecCcccCCCccceEEcceEEEEecC-----CCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHHH
Confidence 478998 5799999988764 89999999999876532 34699999887779999999999999999999999
Q ss_pred hhhhc
Q psy4640 100 ASILQ 104 (109)
Q Consensus 100 a~~~~ 104 (109)
|+...
T Consensus 102 ~~~~~ 106 (120)
T 2d9x_A 102 CTQHH 106 (120)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87544
No 42
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.76 E-value=7.7e-19 Score=116.00 Aligned_cols=82 Identities=18% Similarity=0.223 Sum_probs=65.1
Q ss_pred cCCceEEeeCCeEEEEcCCCC---CcccEEEEcCCeEE---eecCCCCcccceeeEEEee--CC----------------
Q psy4640 21 GSDLDSIGSRNGLAVTDRFEE---EKLLGSILLPSYKI---SPCSSDDKVFRKFSFKAEH--AN---------------- 76 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~~d---~~p~G~I~L~~~~V---~~~~~~~~~~k~~~F~i~~--~~---------------- 76 (109)
+++-|+||+++.|+||+++.+ ..|.|.|+|.+|++ ...+. +..+++|+|+|.+ |.
T Consensus 23 WkrRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~~-~~~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~ 101 (134)
T 2y7b_A 23 WHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPANR-EFCARRNTFELITVRPQREDDRETLVSQCRDTL 101 (134)
T ss_dssp EEEEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECCT-TTCCCTTEEEEEEEEECCTTCCCCSSEEEETTE
T ss_pred cEEEEEEEECCEEEEECCCCcccccCceEEEEhhhCccccccccch-hhccCCCEEEEEecCCCcccccccccccccCCC
Confidence 344589999999999996544 89999999999874 43322 2246789999976 32
Q ss_pred -ceEEEEEcCCHHHHHHHHHHHHHhhhh
Q psy4640 77 -MRTYYFAADTRESMIQWMNALSLASIL 103 (109)
Q Consensus 77 -~r~y~fsA~s~~e~~~Wi~aI~~a~~~ 103 (109)
.|+|+|+|+|++|+++||+||+.|+..
T Consensus 102 ~~r~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 102 CVTKNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp EEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 268999999999999999999998754
No 43
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.76 E-value=2.4e-18 Score=119.75 Aligned_cols=81 Identities=14% Similarity=0.127 Sum_probs=65.4
Q ss_pred CCceEEeeCCeEEEEcC----CCCCcccEEEEcCCeE-EeecCC--CCcccce---------------------eeEEEe
Q psy4640 22 SDLDSIGSRNGLAVTDR----FEEEKLLGSILLPSYK-ISPCSS--DDKVFRK---------------------FSFKAE 73 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~----~~d~~p~G~I~L~~~~-V~~~~~--~~~~~k~---------------------~~F~i~ 73 (109)
++-|+||++++|+||++ +.+.+|.|.|+|.++. |+.+.+ ....+++ |+|+|.
T Consensus 25 KkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I~ 104 (169)
T 1btk_A 25 KKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVV 104 (169)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---------CCTTHHHHCCCEEEEEE
T ss_pred ceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccccccCcccccccccccccccccEEEE
Confidence 33479999999999998 5678999999999986 555521 1112222 899999
Q ss_pred eCCceEEEEEcCCHHHHHHHHHHHHHhhhh
Q psy4640 74 HANMRTYYFAADTRESMIQWMNALSLASIL 103 (109)
Q Consensus 74 ~~~~r~y~fsA~s~~e~~~Wi~aI~~a~~~ 103 (109)
+++ |+|||+|+|++|+++||+||+.++..
T Consensus 105 t~~-rt~yl~A~s~~E~~eWi~aI~~~i~~ 133 (169)
T 1btk_A 105 YDE-GPLYVFSPTEELRKRWIHQLKNVIRY 133 (169)
T ss_dssp ETT-CCEEEEESCHHHHHHHHHHHHHHHTT
T ss_pred eCC-ceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 876 89999999999999999999998864
No 44
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.75 E-value=6.4e-18 Score=121.29 Aligned_cols=82 Identities=12% Similarity=0.162 Sum_probs=69.7
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCC-CCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHh
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSS-DDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 100 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~-~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a 100 (109)
++-|+||+++.|+||+++.+..|.|.|+|.+|++....+ ....+++++|.|.+++.|+|+|+|+|++|+++||.||+.|
T Consensus 127 kkRwfVL~~~~L~Yyk~~~~~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL~~a 206 (211)
T 1u5e_A 127 QKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFI 206 (211)
T ss_dssp EEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred EeEEEEEECCEEEEEcCCCCccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence 334799999999999999999999999999998765432 1123567999999887799999999999999999999998
Q ss_pred hhh
Q psy4640 101 SIL 103 (109)
Q Consensus 101 ~~~ 103 (109)
+..
T Consensus 207 i~~ 209 (211)
T 1u5e_A 207 LQD 209 (211)
T ss_dssp HHT
T ss_pred HHH
Confidence 864
No 45
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=5.1e-18 Score=109.69 Aligned_cols=75 Identities=17% Similarity=0.123 Sum_probs=64.3
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCCeE-EeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHh
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 100 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~-V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a 100 (109)
++-|+||+++.|+||+++.+..|.|.|+|.+++ |...+ +++|.|.++ .|+|+|+|+|++|+++||++|+.|
T Consensus 26 kkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~-------~~~F~i~~~-~r~~~l~a~s~~e~~~Wi~~l~~~ 97 (115)
T 2cod_A 26 QKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQG-------DNKFEVVTT-QRTFVFRVEKEEERNDWISILLNA 97 (115)
T ss_dssp EEEEEEECSSEEEEEESSCCSSCCCEEETTTEEEEEEET-------TTEEEEEES-SCCEEEECSSHHHHHHHHHHHHHH
T ss_pred ceEEEEEECCEEEEEcCCCCcccCCEEECCcceEEEeCC-------CCEEEEEeC-CcEEEEECCCHHHHHHHHHHHHHH
Confidence 334799999999999999999999999999885 44322 589999866 489999999999999999999999
Q ss_pred hhhc
Q psy4640 101 SILQ 104 (109)
Q Consensus 101 ~~~~ 104 (109)
+..+
T Consensus 98 ~~~~ 101 (115)
T 2cod_A 98 LKSQ 101 (115)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 8544
No 46
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.75 E-value=6.4e-18 Score=105.83 Aligned_cols=72 Identities=22% Similarity=0.334 Sum_probs=61.5
Q ss_pred ceEEeeCCeEEEEcCCCCC--cccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 24 LDSIGSRNGLAVTDRFEEE--KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 24 ~~~vL~~~~L~yyk~~~d~--~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
-|+||+++.|+||+++.+. .|.|.|+|.+|.+.... ..+++|.|.+++ |+|+|+|+|++|+++||+||+.|.
T Consensus 20 R~FvL~~~~L~Yy~~~~~~~~~~~~~i~l~~~~~~~~~-----~~~~~F~i~~~~-r~~~l~A~s~~e~~~Wi~aLq~Ak 93 (94)
T 2rsg_A 20 RWVVLKNNALSYYKSEDETEYGCRGSICLSKAVITPHD-----FDECRFDISVND-SVWYLRAQDPDHRQQWIDAIEQHK 93 (94)
T ss_dssp EEEEEETTEEEEESSTTGGGTCCSEEEETTTCEEEECS-----SCSSEEEEEETT-EEEEEECCSSCCTHHHHHHHHHHC
T ss_pred EEEEEECCEEEEEEecccccccceeeEecceeeeecCc-----ccceeEEEEeCC-eEEEEECCCHHHHHHHHHHHHhhc
Confidence 3799999999999988654 58999999999876532 246899998875 999999999999999999999873
No 47
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.74 E-value=1.7e-17 Score=114.70 Aligned_cols=80 Identities=20% Similarity=0.198 Sum_probs=65.3
Q ss_pred ceEEeeCCeEEEEcCCCC-CcccEEEEcCCeE-EeecCCCC---cccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHH
Q psy4640 24 LDSIGSRNGLAVTDRFEE-EKLLGSILLPSYK-ISPCSSDD---KVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALS 98 (109)
Q Consensus 24 ~~~vL~~~~L~yyk~~~d-~~p~G~I~L~~~~-V~~~~~~~---~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~ 98 (109)
-|+||+++.|+||+++.+ ..+.|.|+|.++. |+.+.+.+ ....+++|.|.+++ |+|||+|+|++|+++||+||+
T Consensus 39 RwFVL~~~~L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~~-rt~~l~A~s~~e~~~Wi~aL~ 117 (164)
T 2lul_A 39 RLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDA-NTLYIFAPSPQSRDLWVKKLK 117 (164)
T ss_dssp EEEEEESSEEEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEECSS-CEEEEECSSHHHHHHHHHHHH
T ss_pred EEEEEECCEEEEEeccCcccccccEEEEeeeEEEEeccccccCcccccceeEEEecCC-cEEEEECCCHHHHHHHHHHHH
Confidence 479999999999998764 4688999998875 55544322 23457899998775 899999999999999999999
Q ss_pred Hhhhhc
Q psy4640 99 LASILQ 104 (109)
Q Consensus 99 ~a~~~~ 104 (109)
.++...
T Consensus 118 ~~i~~n 123 (164)
T 2lul_A 118 EEIKNN 123 (164)
T ss_dssp HHHTTC
T ss_pred HHHHHC
Confidence 998754
No 48
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.73 E-value=1.2e-17 Score=114.65 Aligned_cols=80 Identities=18% Similarity=0.206 Sum_probs=59.6
Q ss_pred cCCceEEeeCCeEEEEcCCCC--CcccEEEEcCC--eEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHH
Q psy4640 21 GSDLDSIGSRNGLAVTDRFEE--EKLLGSILLPS--YKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNA 96 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~~d--~~p~G~I~L~~--~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~a 96 (109)
+++-|+||+++.|+||+++.+ ..+.|.|+|.. |.+....+ ..+++|+|.|.+++ |+|+|+|+|++||++||++
T Consensus 29 WkkRwfvL~~~~L~yyk~~~~~~~~~~g~i~l~~~~~~~~~~~~--~~~~~~~F~I~t~~-r~~~l~A~s~~e~~~Wi~a 105 (168)
T 2j59_M 29 WKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLIDISYS--ETKRKNVFRLTTSD-CECLFQAEDRDDMLAWIKT 105 (168)
T ss_dssp CEEEEEEEETTEEEEESCTTCC--------CEECSSCEEEECSS--SCSCSSEEEEECSS-CEEEEECSSHHHHHHHHHH
T ss_pred ceEEEEEEeCCEEEEEECCcccccccCCceEecccceEEEeccc--cCCCCCEEEEEeCC-ceEEEEcCCHHHHHHHHHH
Confidence 444589999999999999965 67899999865 66554332 23678999999876 8999999999999999999
Q ss_pred HHHhhhh
Q psy4640 97 LSLASIL 103 (109)
Q Consensus 97 I~~a~~~ 103 (109)
|+.|+..
T Consensus 106 i~~~~~~ 112 (168)
T 2j59_M 106 IQESSNL 112 (168)
T ss_dssp HHHHCCC
T ss_pred HHHHHhc
Confidence 9998753
No 49
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=4.6e-17 Score=105.50 Aligned_cols=74 Identities=19% Similarity=0.276 Sum_probs=61.4
Q ss_pred CceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhhh
Q psy4640 23 DLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASI 102 (109)
Q Consensus 23 ~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~~ 102 (109)
+-|+||+++.|+||+++.+ .+.+.|.|.+|.|...+ .++++|.|.+++ |+|+|+|+|++|+++||+||+.|+.
T Consensus 29 kR~fvL~~~~L~yyk~~~~-~~~~~i~l~~~~v~~~~-----~~~~~F~I~~~~-r~~~l~a~s~~e~~~Wi~al~~~~~ 101 (114)
T 2da0_A 29 RRKCSVKNGILTISHATSN-RQPAKLNLLTCQVKPNA-----EDKKSFDLISHN-RTYHFQAEDEQDYVAWISVLTNSKE 101 (114)
T ss_dssp EEEEEEETTEEEECCSSCC-SCCEEEETTTSEEEECS-----SSSSCEEEEETT-EEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCEEEEEcCCCC-CCCCEEEeeeeEEEECC-----CCCCEEEEEcCC-cEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 3479999999999999755 66777888788776432 246899998764 9999999999999999999999875
Q ss_pred h
Q psy4640 103 L 103 (109)
Q Consensus 103 ~ 103 (109)
.
T Consensus 102 ~ 102 (114)
T 2da0_A 102 E 102 (114)
T ss_dssp H
T ss_pred H
Confidence 4
No 50
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.70 E-value=5.8e-17 Score=123.64 Aligned_cols=78 Identities=17% Similarity=0.146 Sum_probs=68.4
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCC---------------------ceEE
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN---------------------MRTY 80 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~---------------------~r~y 80 (109)
++-|+||++++|+||+++.+.+|.|.|+|.+|+|..+.+ .++++||+|.+++ .|+|
T Consensus 230 kkRwFVL~~~~L~Yyk~~~~~~p~G~I~L~~~~v~~~~~---~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y 306 (347)
T 2r09_A 230 KRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVED---PRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVY 306 (347)
T ss_dssp EEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEEECC---SSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCE
T ss_pred eeEEEEEcCCEEEEEcCCCccCCcEEEEcCCeEEEEccC---CCCCCEEEEEeCCccccccccccccccccccccCceEE
Confidence 334799999999999999999999999999999877654 3678999998653 4899
Q ss_pred EEEcCCHHHHHHHHHHHHHhhh
Q psy4640 81 YFAADTRESMIQWMNALSLASI 102 (109)
Q Consensus 81 ~fsA~s~~e~~~Wi~aI~~a~~ 102 (109)
+|+|+|++|+++||++|+.|+.
T Consensus 307 ~l~A~s~ee~~~Wi~aI~~ai~ 328 (347)
T 2r09_A 307 RISAPSPEEKEEWMKSIKASIS 328 (347)
T ss_dssp EEECSSHHHHHHHHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999875
No 51
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.69 E-value=1.4e-17 Score=108.99 Aligned_cols=81 Identities=11% Similarity=0.090 Sum_probs=64.7
Q ss_pred CceEEeeC-CeEEEEcCCCCCcccEEEEcCCeEEeecC--CCCcccceeeEEEee---CCceEEEEEcCCHHHHHHHHHH
Q psy4640 23 DLDSIGSR-NGLAVTDRFEEEKLLGSILLPSYKISPCS--SDDKVFRKFSFKAEH---ANMRTYYFAADTRESMIQWMNA 96 (109)
Q Consensus 23 ~~~~vL~~-~~L~yyk~~~d~~p~G~I~L~~~~V~~~~--~~~~~~k~~~F~i~~---~~~r~y~fsA~s~~e~~~Wi~a 96 (109)
+-|+||++ +.|+||+++.+..+.|.|+|.++++..+. ..+ .+++++|.|.+ ...|+|+|+|+|++|+++||+|
T Consensus 26 kRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~-~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~a 104 (125)
T 1unq_A 26 PRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTE-RPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTA 104 (125)
T ss_dssp EEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECTTCEEEEEC-SSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHH
T ss_pred CcEEEEecCCEEEEEeCCCCCCCCceeEccceeEEeeeecccc-cCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHH
Confidence 34799995 69999999999899999999877653221 111 25679999986 4568999999999999999999
Q ss_pred HHHhhhhc
Q psy4640 97 LSLASILQ 104 (109)
Q Consensus 97 I~~a~~~~ 104 (109)
|+.|+...
T Consensus 105 l~~~~~~~ 112 (125)
T 1unq_A 105 IQTVADGL 112 (125)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhc
Confidence 99988543
No 52
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.68 E-value=1.3e-16 Score=115.24 Aligned_cols=76 Identities=22% Similarity=0.204 Sum_probs=65.5
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
++-|+||+++.|+||+++.+..|.|.|+|.+|++..... .++++|.|.+++ |+|+|+|+|++|+++||++|+.++
T Consensus 80 kkRwfvL~~~~L~Yyk~~~~~~~~g~I~L~~~~~v~~~~----~k~~~F~I~t~~-r~~~l~A~s~~e~~~Wv~aL~~~i 154 (228)
T 3tfm_A 80 KKRWFVLRQSKLMYFENDSEEKLKGTVEVRSAKEIIDNT----NKENGIDIIMAD-RTFHLIAESPEDASQWFSVLSQVH 154 (228)
T ss_dssp EEEEEEECSSEEEEESSTTCCSEEEEEEGGGCSEEEEET----TTTSEEEEECSS-CEEEEECSSHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCEEEEEeCCCCcceeEEEEcCCCEEeccCC----CCCcEEEEEcCC-cEEEEEcCCHHHHHHHHHHHHHHH
Confidence 334799999999999999999999999999987533222 457999998765 999999999999999999999988
Q ss_pred h
Q psy4640 102 I 102 (109)
Q Consensus 102 ~ 102 (109)
.
T Consensus 155 ~ 155 (228)
T 3tfm_A 155 S 155 (228)
T ss_dssp T
T ss_pred h
Confidence 5
No 53
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.68 E-value=1.2e-16 Score=122.68 Aligned_cols=80 Identities=9% Similarity=0.086 Sum_probs=68.7
Q ss_pred cCCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCc-eEEEEEcCCHHHHHHHHHHHHH
Q psy4640 21 GSDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANM-RTYYFAADTRESMIQWMNALSL 99 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~-r~y~fsA~s~~e~~~Wi~aI~~ 99 (109)
|++-|+||++++|+||++ .+..|.|.|+|.+|+|..+++ ..++|||+|.+++. |+|+|+|+|++||++||+||+.
T Consensus 297 WkkRwfvL~~~~L~y~k~-~~~~~~~~i~l~~~~v~~~~~---~~r~~~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~ 372 (385)
T 2q13_A 297 WDRQFYFTQGGNLMSQAR-GDVAGGLAMDIDNCSVMAVDC---EDRRYCFQITSFDGKKSSILQAESKKDHEEWICTINN 372 (385)
T ss_dssp CEEEEEEEETTEEEEECS-SCSSCEEEEECTTCEEEEECC---TTCSSEEEEECTTSCBCCCEECSSHHHHHHHHHHHHH
T ss_pred ceeEEEEEECCEEEEecC-CCcCCCceEEccceEEEeccc---cCCCceEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHH
Confidence 444579999999999999 467789999999999887654 25689999998764 8999999999999999999999
Q ss_pred hhhhc
Q psy4640 100 ASILQ 104 (109)
Q Consensus 100 a~~~~ 104 (109)
++..-
T Consensus 373 ~~~~~ 377 (385)
T 2q13_A 373 ISKQI 377 (385)
T ss_dssp HHTTC
T ss_pred HHHhh
Confidence 87643
No 54
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.66 E-value=1e-16 Score=105.88 Aligned_cols=85 Identities=15% Similarity=0.084 Sum_probs=58.8
Q ss_pred ccccCCceEEeeC-CeEEEEcCCCC-----------------CcccEEEEcCCeEEeecCC---CCcccceeeEEEeeCC
Q psy4640 18 KSVGSDLDSIGSR-NGLAVTDRFEE-----------------EKLLGSILLPSYKISPCSS---DDKVFRKFSFKAEHAN 76 (109)
Q Consensus 18 ~~~~~~~~~vL~~-~~L~yyk~~~d-----------------~~p~G~I~L~~~~V~~~~~---~~~~~k~~~F~i~~~~ 76 (109)
|.|-++ |+||++ +.|+||++..+ ..|.|.|+|.+|++..+.. .....++++|.|.+++
T Consensus 20 k~WkkR-wFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~F~I~t~~ 98 (128)
T 2rlo_A 20 KEWKKK-YVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGSAGQAEEENFEFLIVSST 98 (128)
T ss_dssp CCEEEE-EEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCCCSSCCCCCCCEEEECTT
T ss_pred CCccEE-EEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCccccccccccccccccccccccCCceEEEEcCC
Confidence 344443 789996 78889976321 2355566666655432210 0001457999999887
Q ss_pred ceEEEEEcCCHHHHHHHHHHHHHhhhh
Q psy4640 77 MRTYYFAADTRESMIQWMNALSLASIL 103 (109)
Q Consensus 77 ~r~y~fsA~s~~e~~~Wi~aI~~a~~~ 103 (109)
.|+|+|+|+|++|+++||+||+.|+..
T Consensus 99 ~r~~~l~A~s~~e~~~Wi~ai~~~i~~ 125 (128)
T 2rlo_A 99 GQTWHFEAASFEERDAWVQAIESQILA 125 (128)
T ss_dssp SCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999998753
No 55
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.66 E-value=7.8e-17 Score=120.36 Aligned_cols=82 Identities=9% Similarity=0.066 Sum_probs=69.1
Q ss_pred ccCCceEEeeCCeEEEEcCCCC------CcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHH
Q psy4640 20 VGSDLDSIGSRNGLAVTDRFEE------EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQW 93 (109)
Q Consensus 20 ~~~~~~~vL~~~~L~yyk~~~d------~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~W 93 (109)
-|+..|+||+++.|+||+++.. ..|.+.|+|.++.|..+.+ ..+++|+|+|.+++.++|+|+|+|.+||++|
T Consensus 38 ~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a~d--~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~W 115 (279)
T 3a8n_A 38 KWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVPE--HPKKDFVFCLSNSLGDAFLFQTTSQTELENW 115 (279)
T ss_dssp CCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEECCCTT--SSSSCSCCCEEETTTEEEECCCSCHHHHHHH
T ss_pred CCeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEEeccc--cCCCCcEEEEEcCCCCEEEEeCCCHHHHHHH
Confidence 3445789999999999998863 3688999999999886543 3467899999988889999999999999999
Q ss_pred HHHHHHhhhh
Q psy4640 94 MNALSLASIL 103 (109)
Q Consensus 94 i~aI~~a~~~ 103 (109)
|.+|+.|+..
T Consensus 116 I~aI~~a~~~ 125 (279)
T 3a8n_A 116 ITAIHSACAA 125 (279)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998863
No 56
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.65 E-value=7e-16 Score=105.90 Aligned_cols=58 Identities=21% Similarity=0.316 Sum_probs=49.3
Q ss_pred cEEEEcCCeEEeecCCCCcccceeeEEEeeC--CceEEEEEcCCHHHHHHHHHHHHHhhhh
Q psy4640 45 LGSILLPSYKISPCSSDDKVFRKFSFKAEHA--NMRTYYFAADTRESMIQWMNALSLASIL 103 (109)
Q Consensus 45 ~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~--~~r~y~fsA~s~~e~~~Wi~aI~~a~~~ 103 (109)
.|+|+|.||.|+..+.. +..++|+|+|.++ +.++|+|+|+|.+||.+||+||+.|++.
T Consensus 90 kG~IdL~gc~V~~~~~~-~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~~ 149 (150)
T 2fjl_A 90 RGVLDVPACQIAIRPEG-KNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQT 149 (150)
T ss_dssp CEEECSTTCEEEEETTC-SSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred cceEecCccEEEeccCC-CCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 79999999999876542 2367899999865 3579999999999999999999999863
No 57
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.65 E-value=9.3e-16 Score=118.60 Aligned_cols=80 Identities=14% Similarity=0.109 Sum_probs=64.7
Q ss_pred CCceEEeeCCeEEEEcCCCCCcccEEEEcCC----eEEeecCCCCccc--ceeeEEEeeCCceEEEEEcCCHHHHHHHHH
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEEKLLGSILLPS----YKISPCSSDDKVF--RKFSFKAEHANMRTYYFAADTRESMIQWMN 95 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~----~~V~~~~~~~~~~--k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~ 95 (109)
++-|+||+++.|+||+++.+..|.|.|+|.. +.|....+.+..+ ++|+|.|.+++ |+|+|+|+|++|+++||+
T Consensus 287 KkRwFVL~~~~L~YYk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I~t~~-rty~l~A~s~~e~~~Wi~ 365 (386)
T 3lju_X 287 RKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPD-RKFLFACETESDQREWVA 365 (386)
T ss_dssp EEEEEEEETTEEEEESSTTCSBCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEEECSS-CEEEEEESSHHHHHHHHH
T ss_pred cccEEEEECCEEEEEecCCCcccceEEEeecceeeeeecccCCccccccCCCcEEEEEeCC-eEEEEEcCCHHHHHHHHH
Confidence 3347999999999999999999999999954 4454433322112 26999999875 999999999999999999
Q ss_pred HHHHhhh
Q psy4640 96 ALSLASI 102 (109)
Q Consensus 96 aI~~a~~ 102 (109)
||+.++.
T Consensus 366 aL~~~i~ 372 (386)
T 3lju_X 366 AFQKAVD 372 (386)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999874
No 58
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.64 E-value=5e-16 Score=114.90 Aligned_cols=80 Identities=16% Similarity=0.007 Sum_probs=65.9
Q ss_pred cCCceEEeeCC-------eEEEEcCCCC-----CcccEEEEcCCeE-EeecCCCCcccceeeEEEeeCCceEEEEEcCCH
Q psy4640 21 GSDLDSIGSRN-------GLAVTDRFEE-----EKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFAADTR 87 (109)
Q Consensus 21 ~~~~~~vL~~~-------~L~yyk~~~d-----~~p~G~I~L~~~~-V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~ 87 (109)
+++-|+||+++ .|+||+++.+ .+|.|.|+|.+|. |....+ .+++|+|.|.++ .|+|+|+|+|+
T Consensus 22 WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~~---~~~~~~F~I~t~-~rty~l~A~se 97 (264)
T 1qqg_A 22 MHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRAD---SKNKHLVALYTR-DEHFAIAADSE 97 (264)
T ss_dssp CCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECC---SSCSSEEEEEES-SCEEEEECSSH
T ss_pred CEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEeccC---CCCCcEEEEEEC-CEEEEEEeCCH
Confidence 44458999998 9999999887 6899999999986 554433 356899999987 59999999999
Q ss_pred HHHHHHHHHHHHhhhhc
Q psy4640 88 ESMIQWMNALSLASILQ 104 (109)
Q Consensus 88 ~e~~~Wi~aI~~a~~~~ 104 (109)
+|+++||++|+.++...
T Consensus 98 ~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 98 AEQDSWYQALLQLHNRA 114 (264)
T ss_dssp HHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999987654
No 59
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.63 E-value=3.1e-16 Score=121.14 Aligned_cols=79 Identities=15% Similarity=0.105 Sum_probs=67.4
Q ss_pred cCCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCC-ceEEEEEcCCHHHHHHHHHHHHH
Q psy4640 21 GSDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN-MRTYYFAADTRESMIQWMNALSL 99 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~-~r~y~fsA~s~~e~~~Wi~aI~~ 99 (109)
|++-|+||+++.|+||+.. +..+.+.|+|.+|+|..++.. .++|||+|.+++ .|+|+|+|+|++||++||+||+.
T Consensus 320 W~rrwfvl~~~~l~y~~~~-~~~~~~~~~l~~~~v~~~~~~---~r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~ 395 (407)
T 4h8s_A 320 WERLYFFTQGGNLMCQPRG-AVAGGLIQDLDNCSVMAVDCE---DRRYCFQITTPNGKSGIILQAESRKENEEWICAINN 395 (407)
T ss_dssp EEEEEEEECSSCEECCCTT-CSSCCCCBCSSCCEEEEECCT---TCSSEEEEECTTSSCCEEEECSSSHHHHHHHHHHHH
T ss_pred ceEEEEEEECCEEEEEeCC-CCCCCeEEECCceEEEECCCC---CCCceEEEEecCCCceEEEEcCCHHHHHHHHHHHHH
Confidence 3445899999999999976 467889999999999877653 468999999875 57999999999999999999999
Q ss_pred hhhh
Q psy4640 100 ASIL 103 (109)
Q Consensus 100 a~~~ 103 (109)
|+..
T Consensus 396 a~~~ 399 (407)
T 4h8s_A 396 ISRQ 399 (407)
T ss_dssp HHSC
T ss_pred HHHH
Confidence 8754
No 60
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.60 E-value=1.2e-15 Score=111.98 Aligned_cols=83 Identities=12% Similarity=0.069 Sum_probs=64.5
Q ss_pred cCCceEEeeCCeEEEEcCCCCCcccEEEEcC---CeEEeecCCC---CcccceeeEEEeeCC-----ceEEEEEcCCHHH
Q psy4640 21 GSDLDSIGSRNGLAVTDRFEEEKLLGSILLP---SYKISPCSSD---DKVFRKFSFKAEHAN-----MRTYYFAADTRES 89 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~---~~~V~~~~~~---~~~~k~~~F~i~~~~-----~r~y~fsA~s~~e 89 (109)
+++-|+||+++.||||+++.+.+|.|.|+|. ++.|...... ....++|||.|.+++ .++|||+|+|++|
T Consensus 184 WkkR~fvL~~~~L~yyk~~~~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~~l~A~s~~e 263 (291)
T 3tca_A 184 WKRRYFLLRASGIYYVPKGKTKTSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCDDART 263 (291)
T ss_dssp EEEEEEEECSSEEEECCTTCCSSTTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEEECTTCCSCCTTSEEEECSSHHH
T ss_pred ceEEEEEEeCCEEEEEecCccccccCceeeccceeEEEEecCccccccCCCCCeEEEEEcCCCCCCCceEEEEECCCHHH
Confidence 3445899999999999999999999888874 4455433221 122457999998653 4679999999999
Q ss_pred HHHHHHHHHHhhhh
Q psy4640 90 MIQWMNALSLASIL 103 (109)
Q Consensus 90 ~~~Wi~aI~~a~~~ 103 (109)
+.+||+||+.|.+.
T Consensus 264 ~~~Wi~air~Ak~g 277 (291)
T 3tca_A 264 LSQWVMGIRIAKYG 277 (291)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998754
No 61
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=99.59 E-value=5.2e-15 Score=102.88 Aligned_cols=84 Identities=18% Similarity=0.152 Sum_probs=69.2
Q ss_pred cccCCceEEeeCCeEEEEcCCCC--CcccEEEEcCCeEEeecCCCCcccceeeEEEeeC---CceEEEEEcCCHHHHHHH
Q psy4640 19 SVGSDLDSIGSRNGLAVTDRFEE--EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA---NMRTYYFAADTRESMIQW 93 (109)
Q Consensus 19 ~~~~~~~~vL~~~~L~yyk~~~d--~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~---~~r~y~fsA~s~~e~~~W 93 (109)
+.-+.-|+|+++..|+|||++++ ..|.|.|+|.||+|.+.-.. ...+|.|++.-| +...|||.|+|++++.+|
T Consensus 64 KgyKryWFv~kd~~LsyYKskEe~~geP~~~I~LrGCEVtpDVnv--a~~Kf~IkL~vP~~~gm~e~~Lrcd~E~qya~W 141 (173)
T 4f7h_A 64 KGYKQYWCTFKDTSISCYKSKEESSGTPAHQMNLRGCEVTPDVNI--SGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHW 141 (173)
T ss_dssp CCCEEEEEEEETTEEEEESCGGGCSSCCSEEEECTTCEEEEEEET--TTTEEEEEEEEEETTEEEEEEEEESSHHHHHHH
T ss_pred ccceeEEEEEeCCEEEEEcCHhHhcCCCceEEecCceEEeccccc--cccceeEEEeccCCCCcceeeeecCCHHHHHHH
Confidence 34444689999999999999887 78999999999999863221 245788887533 788999999999999999
Q ss_pred HHHHHHhhhhc
Q psy4640 94 MNALSLASILQ 104 (109)
Q Consensus 94 i~aI~~a~~~~ 104 (109)
|+|.+.|+...
T Consensus 142 MAAcrLAskGk 152 (173)
T 4f7h_A 142 MAACRLASKGK 152 (173)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHhhhhccCC
Confidence 99999999775
No 62
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.56 E-value=4.9e-15 Score=114.56 Aligned_cols=76 Identities=12% Similarity=0.227 Sum_probs=59.7
Q ss_pred eEEe--eCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEe---eCCceEEEEEcCCHHHHHHHHHHHHH
Q psy4640 25 DSIG--SRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAE---HANMRTYYFAADTRESMIQWMNALSL 99 (109)
Q Consensus 25 ~~vL--~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~---~~~~r~y~fsA~s~~e~~~Wi~aI~~ 99 (109)
|+|| ++++|+||+++.+.+|.|.|.|.++++...+. ..+++++|.|. ....|+|||+|+|.+||++||++|+.
T Consensus 166 wFVL~~~~~~L~Yy~~~~~~~p~g~I~L~~~~~~~~~~--~~~~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~ 243 (386)
T 3lju_X 166 KFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPA--KIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRA 243 (386)
T ss_dssp EEEEETTTTEEEEEC-----CCSEEEEGGGEEEEECHH--HHTSTTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHH
T ss_pred EEEEEcCCCEEEEECCCCccCcccEEEeeccEEEEccc--ccCCCceEEEEEecCCCceEEEEEcCCHHHHHHHHHhhhh
Confidence 6899 89999999999999999999999987665322 23568999986 25569999999999999999999998
Q ss_pred hhh
Q psy4640 100 ASI 102 (109)
Q Consensus 100 a~~ 102 (109)
|..
T Consensus 244 a~~ 246 (386)
T 3lju_X 244 ARF 246 (386)
T ss_dssp HHH
T ss_pred ccc
Confidence 853
No 63
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.55 E-value=2.5e-14 Score=94.27 Aligned_cols=83 Identities=13% Similarity=0.095 Sum_probs=65.1
Q ss_pred ccCCceEEeeCCeEEEEcCCCCC---cccEEEEcCCe-EEeecCCCC-----cccceeeEEEeeC-----CceEEEEEcC
Q psy4640 20 VGSDLDSIGSRNGLAVTDRFEEE---KLLGSILLPSY-KISPCSSDD-----KVFRKFSFKAEHA-----NMRTYYFAAD 85 (109)
Q Consensus 20 ~~~~~~~vL~~~~L~yyk~~~d~---~p~G~I~L~~~-~V~~~~~~~-----~~~k~~~F~i~~~-----~~r~y~fsA~ 85 (109)
.+++-++||.++.|+||+++.+. .|.|.|+|+.+ .|+.+.+.| ....++.|+|..+ ..+++||.|+
T Consensus 19 ~Wkkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~~~~~~~~~~~l~l~A~ 98 (117)
T 2rov_A 19 GWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILYANEGISSAKNLLLLAN 98 (117)
T ss_dssp CCCEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEECSSSSTTCEEEEEECS
T ss_pred CcEEEEEEEECCEEEEEECCCCcccCCceEEEECcccEEEEEcccccccccccccCCcEEEEEeCCCCCCCCcEEEEEeC
Confidence 45556899999999999987654 89999999765 466664422 1224678999763 3599999999
Q ss_pred CHHHHHHHHHHHHHhhh
Q psy4640 86 TRESMIQWMNALSLASI 102 (109)
Q Consensus 86 s~~e~~~Wi~aI~~a~~ 102 (109)
|++|+++||.+|+.++.
T Consensus 99 s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 99 STEEQQKWVSRLVKKIP 115 (117)
T ss_dssp SHHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 99999999999998874
No 64
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=99.53 E-value=4.8e-14 Score=97.20 Aligned_cols=83 Identities=22% Similarity=0.219 Sum_probs=68.3
Q ss_pred cccCCceEEeeCCeEEEEcCCCC--CcccEEEEcCCeEEee-cCCCCcccceeeEEEee---CCceEEEEEcCCHHHHHH
Q psy4640 19 SVGSDLDSIGSRNGLAVTDRFEE--EKLLGSILLPSYKISP-CSSDDKVFRKFSFKAEH---ANMRTYYFAADTRESMIQ 92 (109)
Q Consensus 19 ~~~~~~~~vL~~~~L~yyk~~~d--~~p~G~I~L~~~~V~~-~~~~~~~~k~~~F~i~~---~~~r~y~fsA~s~~e~~~ 92 (109)
+..+.-|+|++|..|+|||++++ ..|.+.|+|.||+|.+ +.. ...+|.|+|.- ++...+||.|+|+++..+
T Consensus 43 KgfKryWfv~kDt~LsyYKSkEe~~geP~~~inLrGCEVtPDVnv---a~~Kf~ikL~ip~~~gm~e~~LrcdsE~QYa~ 119 (165)
T 4bbk_A 43 KACKQYWFVFKDTSIAYFKNKELEQGEPIEKLNLRGCEIVPDVNV---SGRKFGIKLLIPVADGMNEVYLRCDHEDQYAR 119 (165)
T ss_dssp -CCEEEEEEEETTEEEEESSGGGTTSCCSEEEECTTCEEEEEEET---TTTEEEEEEEEEETTEEEEEEEEESSHHHHHH
T ss_pred ccceeEEEEEeCCEEEEEcCHHHhcCCCceEEecCccEEeccccc---ccceeeEEEecCCCCcceeeeeecCCHHHHHH
Confidence 44455689999999999999877 6799999999999875 322 24578888843 367799999999999999
Q ss_pred HHHHHHHhhhhc
Q psy4640 93 WMNALSLASILQ 104 (109)
Q Consensus 93 Wi~aI~~a~~~~ 104 (109)
||+|++.|+...
T Consensus 120 WMAAcrLAskGk 131 (165)
T 4bbk_A 120 WMAACILASKGK 131 (165)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHhhhccccc
Confidence 999999999864
No 65
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=7.2e-13 Score=88.38 Aligned_cols=93 Identities=18% Similarity=0.185 Sum_probs=71.6
Q ss_pred CCCCcccccCCceEEeeCC------eEEEEcCCCC----CcccEEEEcCCe-EEeecCCC-CcccceeeEEEeeCCceEE
Q psy4640 13 SPSSRKSVGSDLDSIGSRN------GLAVTDRFEE----EKLLGSILLPSY-KISPCSSD-DKVFRKFSFKAEHANMRTY 80 (109)
Q Consensus 13 ~~~~~~~~~~~~~~vL~~~------~L~yyk~~~d----~~p~G~I~L~~~-~V~~~~~~-~~~~k~~~F~i~~~~~r~y 80 (109)
+.+++|+ +++.|+||... .|.||.+++. ..+..+|.|.+| +|..+..+ ...+..++|.|.+++ |+|
T Consensus 23 q~~fgkK-Wrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~pk~~~aF~l~T~e-r~~ 100 (127)
T 2d9w_A 23 QQTFGKK-WRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKE-RLY 100 (127)
T ss_dssp CSSSSCB-CCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSCSSCEEEEEEESS-CEE
T ss_pred cchhhhh-hheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCccCCCCcceEEEEEeCC-cEE
Confidence 3377777 55569999654 4999998754 267899999999 57776543 223456899999886 999
Q ss_pred EEEcCCHHHHHHHHHHHHHhhhhccCCC
Q psy4640 81 YFAADTRESMIQWMNALSLASILQNSST 108 (109)
Q Consensus 81 ~fsA~s~~e~~~Wi~aI~~a~~~~~~~~ 108 (109)
+|+|++. |+.+||.+|....-+..+++
T Consensus 101 ~laAe~~-E~~~Wi~~ic~~aF~~~~s~ 127 (127)
T 2d9w_A 101 LLAAPAA-ERGDWVQAICLLAFSGPSSG 127 (127)
T ss_dssp EEEECHH-HHHHHHHHHHHHHTSSCCCC
T ss_pred EEEeCcH-HHHHHHHHHHHHhcCCCCCC
Confidence 9999965 89999999999887766653
No 66
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.32 E-value=6.5e-12 Score=92.72 Aligned_cols=84 Identities=13% Similarity=0.073 Sum_probs=63.9
Q ss_pred ccCCceEEeeCCeEEEEcCCCCCcccEE---EEcCCeEEeecCCCC---cccceeeEEEeeCCc-----eEEEEEcCCHH
Q psy4640 20 VGSDLDSIGSRNGLAVTDRFEEEKLLGS---ILLPSYKISPCSSDD---KVFRKFSFKAEHANM-----RTYYFAADTRE 88 (109)
Q Consensus 20 ~~~~~~~vL~~~~L~yyk~~~d~~p~G~---I~L~~~~V~~~~~~~---~~~k~~~F~i~~~~~-----r~y~fsA~s~~ 88 (109)
-+++-|++|++++||||+..+.+.+.+. ++|+++.|-.+.+.. +..++|||.|.++.. ..+||+|+|++
T Consensus 147 ~WkkRyfvLr~sgLy~~~k~~sk~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k~~~~~~~~~~lcaede~ 226 (256)
T 3hk0_A 147 SWKKLYVCLRRSGLYCSTKGTSAAPRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQ 226 (256)
T ss_dssp CEEEEEEEEETTEEEEESSTTCCCGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETTCSSCCTTCEEEEESSHH
T ss_pred cceEEEEEEeCCEEEEEecCCCCccccceEEEEcCCCEEEEecccccccCCCCCCEEEEEcccccCCCceEEEEEeCCHH
Confidence 3444589999999999998876666654 799999885543311 112379999985432 36999999999
Q ss_pred HHHHHHHHHHHhhhh
Q psy4640 89 SMIQWMNALSLASIL 103 (109)
Q Consensus 89 e~~~Wi~aI~~a~~~ 103 (109)
++.+||+||+.|...
T Consensus 227 ~~~~W~~aIr~ak~g 241 (256)
T 3hk0_A 227 TRTSWMTAFRLLKYG 241 (256)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998754
No 67
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.27 E-value=8.9e-12 Score=93.08 Aligned_cols=83 Identities=12% Similarity=0.120 Sum_probs=58.3
Q ss_pred cCCceEEeeCCeEEEEcCCCCCcc---cEEEEcCCeEEeecCCC---CcccceeeEEEeeCC-----ceEEEEEcCCHHH
Q psy4640 21 GSDLDSIGSRNGLAVTDRFEEEKL---LGSILLPSYKISPCSSD---DKVFRKFSFKAEHAN-----MRTYYFAADTRES 89 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~~d~~p---~G~I~L~~~~V~~~~~~---~~~~k~~~F~i~~~~-----~r~y~fsA~s~~e 89 (109)
+++-|+||+++.||||+..+++.+ .+.++|+++.|-.+... -+..++|||.|.+++ ...|||+|+|+++
T Consensus 174 WkkRyfvLr~sgLyy~~K~~sk~~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~~~~~~~~~~~~caede~~ 253 (281)
T 4gmv_A 174 WKKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDDVRT 253 (281)
T ss_dssp EEEEEEEECSSCEEEC---------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTTCCSCCTTCEEEECSSHHH
T ss_pred CeEEEEEEeCCEEEEEeCCCCCccccceEEEEcCCcEEEEecccccccCCCCCcEEEEecCccCCCCCceEEEEeCCHHH
Confidence 344589999999999997665555 56779999887654321 112457999998643 4589999999999
Q ss_pred HHHHHHHHHHhhhh
Q psy4640 90 MIQWMNALSLASIL 103 (109)
Q Consensus 90 ~~~Wi~aI~~a~~~ 103 (109)
+..||+||+.|...
T Consensus 254 ~~~Wv~Air~ak~g 267 (281)
T 4gmv_A 254 LHQWVNGIRIAKYG 267 (281)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999998764
No 68
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.12 E-value=8.6e-11 Score=90.45 Aligned_cols=82 Identities=12% Similarity=0.086 Sum_probs=56.1
Q ss_pred cCCceEEee-CCeEEEEcCCCCCcccEEEEcCCeEEeecCC-CCcccceeeEEEeeCCceEE---EEEcCCHHHHHHHHH
Q psy4640 21 GSDLDSIGS-RNGLAVTDRFEEEKLLGSILLPSYKISPCSS-DDKVFRKFSFKAEHANMRTY---YFAADTRESMIQWMN 95 (109)
Q Consensus 21 ~~~~~~vL~-~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~-~~~~~k~~~F~i~~~~~r~y---~fsA~s~~e~~~Wi~ 95 (109)
+++-|+||+ ++.|+|||++.+..+.|.|+|.++++..+.. .....++++|.|..++.+.+ .|.+++.+++++|+.
T Consensus 22 Wk~r~fvL~~~~~l~yyk~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ 101 (446)
T 4ejn_A 22 WRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTT 101 (446)
T ss_dssp EEEEEEEEETTSBEEEESSCC-------CCCGGGBCTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHH
T ss_pred ccceEEEEeeCCEEEEEecCCCCCccCcccccCccccceeecCCCCCCCceeEEEcCCCceeeeeEEecCCHHHHHHHHH
Confidence 333478997 8999999999999999999998765422111 00124578999976655555 799999999999999
Q ss_pred HHHHhhh
Q psy4640 96 ALSLASI 102 (109)
Q Consensus 96 aI~~a~~ 102 (109)
||+.++.
T Consensus 102 ai~~~i~ 108 (446)
T 4ejn_A 102 AIQTVAD 108 (446)
T ss_dssp HHHHHCC
T ss_pred HHHhhhh
Confidence 9999864
No 69
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.99 E-value=3.4e-09 Score=70.45 Aligned_cols=89 Identities=15% Similarity=0.104 Sum_probs=71.0
Q ss_pred cccCCceEEeeCCeEEEEcCCCCCcccEEEEcCCe-EEeecCCCC---cccceeeEEEeeCCceEEEEEcC---C-----
Q psy4640 19 SVGSDLDSIGSRNGLAVTDRFEEEKLLGSILLPSY-KISPCSSDD---KVFRKFSFKAEHANMRTYYFAAD---T----- 86 (109)
Q Consensus 19 ~~~~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~-~V~~~~~~~---~~~k~~~F~i~~~~~r~y~fsA~---s----- 86 (109)
+.+++.+-+|...++-||++++++++...|+|.+. .|+.+.... ....+|||+|.+. .++||..++ .
T Consensus 22 ~~rKRHYWrLD~K~Itlf~~e~~~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T~-~~~yyVg~~~~~~p~~~s 100 (125)
T 2coa_A 22 TLRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTA-NATYFVGEMPGGTPGGPS 100 (125)
T ss_dssp CCCEEEEEEECSSEEEEESSSSCSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEECS-SCCCCEECCSCCCSSSCC
T ss_pred ccccceeeEecCCeEEEEecCCCCceeeeeehhHeecccccccccccCCCCCCceEEEEeC-CeEEEEccCCCCCCCCcC
Confidence 45567888999999999999999999999999876 566654321 1235799999876 589999874 1
Q ss_pred ---HHHHHHHHHHHHHhhhhccCCC
Q psy4640 87 ---RESMIQWMNALSLASILQNSST 108 (109)
Q Consensus 87 ---~~e~~~Wi~aI~~a~~~~~~~~ 108 (109)
.+.+..|..||++|.++-.+++
T Consensus 101 g~g~~~a~~W~~aIrqALmPv~~~~ 125 (125)
T 2coa_A 101 GQGAEAARGWETAIRQALMSGPSSG 125 (125)
T ss_dssp CCCSHHHHHHHHHHHHHGGGSSCCC
T ss_pred ccccHHHHHHHHHHHhhccCCCCCC
Confidence 3679999999999999877764
No 70
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=98.97 E-value=2e-09 Score=73.75 Aligned_cols=72 Identities=14% Similarity=0.108 Sum_probs=60.6
Q ss_pred ceEEeeCCeEEEEcCCCCCcccEEEEcCC-eEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhhh
Q psy4640 24 LDSIGSRNGLAVTDRFEEEKLLGSILLPS-YKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASI 102 (109)
Q Consensus 24 ~~~vL~~~~L~yyk~~~d~~p~G~I~L~~-~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~~ 102 (109)
-+.||++.-.+||-|+.....+|.|+|+. +.|+..++ ..|.|.+|+ |+|+|.+. ..++++|++||..+..
T Consensus 69 R~liLT~~PrL~Yvdp~~~~~KGeIpls~~l~ve~k~~-------~~F~I~Tp~-RtY~~~d~-~~~AqeWv~aI~~~~~ 139 (151)
T 1w1g_A 69 RQLLLTEGPHLYYVDPVNKVLKGEIPWSQELRPEAKNF-------KTFFVHTPN-RTYYLMDP-SGNAHKWCRKIQEVWR 139 (151)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEECCCTTCEEEESSS-------SEEEEEETT-EEEEEECT-TSCHHHHHHHHHHHHH
T ss_pred EEEEEcCCceEEEEcCccccccceEecCCCeeEEEcCC-------CEEEEECCC-ceEEEEcC-ccCHHHHHHHHHHHHH
Confidence 36799999999999999999999999975 56665432 389998898 99999997 8899999999999875
Q ss_pred hc
Q psy4640 103 LQ 104 (109)
Q Consensus 103 ~~ 104 (109)
.+
T Consensus 140 ~~ 141 (151)
T 1w1g_A 140 QR 141 (151)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 71
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.94 E-value=7.6e-09 Score=69.03 Aligned_cols=89 Identities=15% Similarity=0.098 Sum_probs=71.4
Q ss_pred cccCCceEEeeCCeEEEEcCCCCCcccEEEEcCCe-EEeecCCCC---cccceeeEEEeeCCceEEEEEcCC--------
Q psy4640 19 SVGSDLDSIGSRNGLAVTDRFEEEKLLGSILLPSY-KISPCSSDD---KVFRKFSFKAEHANMRTYYFAADT-------- 86 (109)
Q Consensus 19 ~~~~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~-~V~~~~~~~---~~~k~~~F~i~~~~~r~y~fsA~s-------- 86 (109)
..+++.+-+|...++-+|+++++.++-..|+|... .|+.+.... ....+|||+|.+. ..+||..++.
T Consensus 22 ~~rKRHYWrLD~K~Itlf~~e~~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T~-~~~y~Vge~~~~~~~~~~ 100 (129)
T 2d9z_A 22 NLRKRHYWRLDSKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITD-TMVYFVGENNGDSSHNPV 100 (129)
T ss_dssp CCCEEEEEEEESSCEEEESCSSCCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEECS-SCEEEECBCCSCCSCCTT
T ss_pred ccccceeeEecCCeEEEEecCCCCceeceeeHHHhcccccccCccccCCCCCCceEEEEEC-CEEEEEccCCCCCCCCcc
Confidence 45677788999999999999999999999999876 466553321 1234699999875 5899998753
Q ss_pred -------HHHHHHHHHHHHHhhhhccCCC
Q psy4640 87 -------RESMIQWMNALSLASILQNSST 108 (109)
Q Consensus 87 -------~~e~~~Wi~aI~~a~~~~~~~~ 108 (109)
.+.++.|..||++|.++-.+++
T Consensus 101 ~~~sg~g~~~a~~We~aIrqALmP~~~~~ 129 (129)
T 2d9z_A 101 LAATGVGLDVAQSWEKAIRQALMSGPSSG 129 (129)
T ss_dssp TTTTTCBHHHHHHHHHHHHHHHHHSCCCC
T ss_pred ccccccchHHHHHHHHHHHHhccCCCCCC
Confidence 7999999999999998877653
No 72
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.76 E-value=3.6e-08 Score=66.20 Aligned_cols=81 Identities=11% Similarity=0.100 Sum_probs=60.8
Q ss_pred EEeeCCeEEEEcCCC---CCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhhh
Q psy4640 26 SIGSRNGLAVTDRFE---EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASI 102 (109)
Q Consensus 26 ~vL~~~~L~yyk~~~---d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~~ 102 (109)
.+|=++.|.|.+-.. .=...|.|||.+..|...++. ...+++|+|..+..+++.++|.|.+|+++||.+|+.++.
T Consensus 49 l~LF~~~Ll~~s~~~~~~~f~~kgklPL~g~~V~~~ed~--~~~~~aFeI~g~~~~~i~v~~~s~eE~~~Wl~~L~~~i~ 126 (132)
T 1v61_A 49 FLLFSSVLIMLSASPRMSGFMYQGKIPIAGMVVNRLDEI--EGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLTK 126 (132)
T ss_dssp EEECSSCEEEEECSSSSSCCEEEEEECTTTCBCSTTCSS--SSSCCCEEEECSSSCEEEECCCCSHHHHHHHHHHHHHHT
T ss_pred EEEcCCeEEEEEecCCCceEEEEEEEecceeEEEecccc--ccCccEEEEecCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 456666666666332 235779999999988765432 256899999876668999999999999999999999875
Q ss_pred hccCCCC
Q psy4640 103 LQNSSTG 109 (109)
Q Consensus 103 ~~~~~~~ 109 (109)
.- +++|
T Consensus 127 ~~-~~~~ 132 (132)
T 1v61_A 127 SG-PSSG 132 (132)
T ss_dssp TS-CSCC
T ss_pred hc-ccCC
Confidence 43 3544
No 73
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.60 E-value=2.1e-07 Score=62.37 Aligned_cols=72 Identities=11% Similarity=0.018 Sum_probs=58.4
Q ss_pred CeEEEEcCCCCCcccEEEEcCCe-EEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhhh
Q psy4640 31 NGLAVTDRFEEEKLLGSILLPSY-KISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASI 102 (109)
Q Consensus 31 ~~L~yyk~~~d~~p~G~I~L~~~-~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~~ 102 (109)
..|.||..++..+|+..|++..+ .|....+.+-..+.|.|-|...+.-.|+|.|.++++|+.|+..|+....
T Consensus 58 y~LEfy~PPkssKpK~~i~cs~I~EVR~tt~LEmPD~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~ 130 (136)
T 1v5m_A 58 FRLEFFVPPKASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVD 130 (136)
T ss_dssp EEEEEESSTTSSSCSSCEETTTCCBCCCCCCSSSCCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCcccCCccccchhhhhhhhhccccccCCccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcC
Confidence 67889999999999999999876 3555444333346789999877766999999999999999999987653
No 74
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=98.39 E-value=5.8e-06 Score=55.89 Aligned_cols=85 Identities=6% Similarity=-0.039 Sum_probs=58.6
Q ss_pred CcccccCCceEEeeCCeEEEE----cC-CCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeC--C---ceEEEEEcC
Q psy4640 16 SRKSVGSDLDSIGSRNGLAVT----DR-FEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA--N---MRTYYFAAD 85 (109)
Q Consensus 16 ~~~~~~~~~~~vL~~~~L~yy----k~-~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~--~---~r~y~fsA~ 85 (109)
.+|.+.-+-.+.+.|-.||-. |. ...-...+.++|.|-.|....++ .-+|+|.|..+ + .+++.|+|+
T Consensus 29 ~~kg~qqR~~FLFND~LL~TK~~~kkk~~~~Y~vr~~~~L~gm~V~~~e~e---~~p~~~~l~s~~~G~~~k~~i~~~A~ 105 (140)
T 3qwm_A 29 QKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQ---YYPNGIRLTSSVPGADIKVLINFNAP 105 (140)
T ss_dssp CCTTTTEEEEEEESSCEEEEECCC---CCCCCCCEEEECCTTEEEEEECCS---SCTTEEEEEECCTTSCCEEEEEEECS
T ss_pred ccccccceEEEEecchhhheeecccCCCCCceEEEEEeeecceEEEcccCC---CCceEEEEEecCCCCcceEEEEEECC
Confidence 334444443345555555543 11 11235778999999999876553 34889999854 2 488999999
Q ss_pred CHHHHHHHHHHHHHhhhh
Q psy4640 86 TRESMIQWMNALSLASIL 103 (109)
Q Consensus 86 s~~e~~~Wi~aI~~a~~~ 103 (109)
|.+|+.+||++|+.|+-.
T Consensus 106 s~~ER~rwi~dL~esI~e 123 (140)
T 3qwm_A 106 NPQDRKKFTDDLRESIAE 123 (140)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999998743
No 75
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=98.37 E-value=5.1e-06 Score=53.94 Aligned_cols=58 Identities=14% Similarity=0.108 Sum_probs=47.1
Q ss_pred cccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhhhh
Q psy4640 43 KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASIL 103 (109)
Q Consensus 43 ~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~~~ 103 (109)
+....++|.+..|..+++. ..-+++|+|.... +++.|+|+|.+|..+||.+|+.|...
T Consensus 51 ~~~~~~~L~~~~v~d~~d~--~~~~n~f~i~~~~-~s~~~~aes~~eK~~Wl~~~~~a~~~ 108 (113)
T 1zc3_B 51 RYNALYPLDRLAVVNVKDN--PPMKDMFKLLMFP-ESRIFQAENAKIKREWLEVLEETKRA 108 (113)
T ss_dssp EEEEEEETTTCEEEEECCB--TTBSSEEEEEETT-EEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcccCEEEECCCC--cccceEEEEEeCC-ceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 4556889999988776542 2457899998654 79999999999999999999998743
No 76
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=98.08 E-value=1.5e-05 Score=61.25 Aligned_cols=76 Identities=16% Similarity=0.142 Sum_probs=52.3
Q ss_pred ceEEeeCCeEEEEcCCCCC--cccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 24 LDSIGSRNGLAVTDRFEEE--KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 24 ~~~vL~~~~L~yyk~~~d~--~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
.+..|=++.|.|-+...+. ...+.|+|.++.|.....+ ..++.|.|..+. ++|.|+|.|++|+++||++|+.|+
T Consensus 261 r~~fLF~d~Ll~~k~~~~~~y~~k~~i~L~~l~v~~~~~~---~~~~~f~i~~~~-~~~~l~a~s~~ek~~W~~~i~~ai 336 (434)
T 3mpx_A 261 RHLFLMNDVLLYTYPQKDGKYRLKNTLAVANMKVSRPVME---KVPYALKIETSE-SCLMLSASSCAERDEWYGCLSRAL 336 (434)
T ss_dssp EEEEEESSEEEEEEECTTSCEEEEEEEEC-----CCCCCT---TSCSEEEEECSS-CEEEEECSSHHHHHHHHHHHHHC-
T ss_pred EEEEEECCEEEEEEecCCCeEEEEEEEEcCCcEEEecCCC---CCCeeEEEecCC-eEEEEecCCHHHHHHHHHHHHHHH
Confidence 4567777788887744332 3568999999988643331 457999997665 789999999999999999999998
Q ss_pred hh
Q psy4640 102 IL 103 (109)
Q Consensus 102 ~~ 103 (109)
..
T Consensus 337 ~e 338 (434)
T 3mpx_A 337 PE 338 (434)
T ss_dssp --
T ss_pred HH
Confidence 64
No 77
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=98.02 E-value=3.8e-05 Score=57.59 Aligned_cols=77 Identities=14% Similarity=0.122 Sum_probs=57.1
Q ss_pred ceEEeeCCeEEEEcCCCC-----------CcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHH
Q psy4640 24 LDSIGSRNGLAVTDRFEE-----------EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQ 92 (109)
Q Consensus 24 ~~~vL~~~~L~yyk~~~d-----------~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~ 92 (109)
.+..|=++.|.+-|.... -...+.|+|.++.|....+.+ .-+++|.|.+.+.+.|.|.|.|.+|.+.
T Consensus 262 ~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d~~--~~~~~F~i~~~~~~~~~l~a~s~~ek~~ 339 (354)
T 1dbh_A 262 RHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTN--EYKHAFEIILKDENSVIFSAKSAEEKNN 339 (354)
T ss_dssp EEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCSS--SCCSEEEECCTTSCCEEEECSSHHHHHH
T ss_pred EEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCccc--ccCccEEEecCCCCEEEEEeCCHHHHHH
Confidence 345566667766664321 124589999999987764422 3468999987655789999999999999
Q ss_pred HHHHHHHhhh
Q psy4640 93 WMNALSLASI 102 (109)
Q Consensus 93 Wi~aI~~a~~ 102 (109)
|+++|+.|..
T Consensus 340 W~~~i~~~~~ 349 (354)
T 1dbh_A 340 WMAALISLQY 349 (354)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999864
No 78
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=97.95 E-value=2e-05 Score=56.33 Aligned_cols=53 Identities=28% Similarity=0.332 Sum_probs=40.1
Q ss_pred ccEEEEcCCeE-EeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHh
Q psy4640 44 LLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 100 (109)
Q Consensus 44 p~G~I~L~~~~-V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a 100 (109)
+.|.+.+.... +..... ..++..|.|.+++ |+|+|+|+|++|+++||.+|+.+
T Consensus 174 ~~g~~~~~~i~s~~~~~~---~~~~~~f~iit~~-r~~~~~a~s~~e~~~Wi~~lq~~ 227 (228)
T 3tfm_A 174 AVGTLDVGLIDSVCASDS---PDRPNSFVIITAN-RVLHCNADTPEEMHHWITLLQRS 227 (228)
T ss_dssp CSEEEEGGGEEEEEECCC---SSCTTEEEEEETT-EEEEEECSSHHHHHHHHHHHCSC
T ss_pred ccccCChhheeccccCCC---CCCCCcEEEEeCC-ceEEEEcCCHHHHHHHHHHHhhc
Confidence 56888886643 222222 2457789998775 99999999999999999999864
No 79
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=97.79 E-value=0.00018 Score=54.94 Aligned_cols=83 Identities=19% Similarity=0.171 Sum_probs=56.7
Q ss_pred ceEEeeCCeEEEEcCCCC-CcccEEEEcCCeEEeecCCCC--cccceeeEEEeeC-CceEEEEEcCCHHHHHHHHHHHHH
Q psy4640 24 LDSIGSRNGLAVTDRFEE-EKLLGSILLPSYKISPCSSDD--KVFRKFSFKAEHA-NMRTYYFAADTRESMIQWMNALSL 99 (109)
Q Consensus 24 ~~~vL~~~~L~yyk~~~d-~~p~G~I~L~~~~V~~~~~~~--~~~k~~~F~i~~~-~~r~y~fsA~s~~e~~~Wi~aI~~ 99 (109)
.+..|=++.|.+-+...+ -...+.|+|.++.|...++.+ ..+-++.|.|.+. +.+.|.|.|.|++|.++|+++|+.
T Consensus 253 ~~~fLF~d~Ll~~k~k~~~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ 332 (406)
T 2vrw_B 253 RYAFLLDKALLICKRRGDSYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEM 332 (406)
T ss_dssp EEEEEESSEEEEEEEETTEEEEEEEEETTTEEEEC--------CTTCEEEEEEETTCSCEEEEEESSHHHHHHHHHHHHH
T ss_pred EEEEecCCEEEEEEecCCceEEEEEecccceeeeecCCCCccCCccceeeEEEecCCCceEEEeCCCHHHHHHHHHHHHH
Confidence 345666666666654322 235689999999887654321 1123589999863 457899999999999999999999
Q ss_pred hhhhccC
Q psy4640 100 ASILQNS 106 (109)
Q Consensus 100 a~~~~~~ 106 (109)
|+....+
T Consensus 333 ai~~~~~ 339 (406)
T 2vrw_B 333 AISNIYP 339 (406)
T ss_dssp HHHHHSC
T ss_pred HHhhhhh
Confidence 9866543
No 80
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=97.79 E-value=8.6e-05 Score=53.58 Aligned_cols=82 Identities=15% Similarity=0.105 Sum_probs=60.7
Q ss_pred CCcccccCCceEEeeC-----C--eEEEEcCCCC----CcccEEEEcCCe-EEeecCCCCcccceeeEEEeeCCceEEEE
Q psy4640 15 SSRKSVGSDLDSIGSR-----N--GLAVTDRFEE----EKLLGSILLPSY-KISPCSSDDKVFRKFSFKAEHANMRTYYF 82 (109)
Q Consensus 15 ~~~~~~~~~~~~vL~~-----~--~L~yyk~~~d----~~p~G~I~L~~~-~V~~~~~~~~~~k~~~F~i~~~~~r~y~f 82 (109)
.++|+|-.+ |+||+. + .|..|||..| .+++.+|.|.++ -++.....+ ++.+++.|...+ .++.|
T Consensus 18 r~~KkWk~r-w~vlrk~s~~adcl~L~vYkd~~dr~k~~~~KaslsL~~~~GlE~g~~ld--k~s~TlAIIc~d-~~~vL 93 (224)
T 3ml4_A 18 RDGKKWKSR-WLVLRKPSPVADCLLMLVYKDKCERSKGLRERSSLTLEDICGLEPALPYE--GLAHTLAIICLS-QAVML 93 (224)
T ss_dssp C---CCEEE-EEEEECSSTTSSCEEEEEESSSHHHHSCCCCSEEEEECCEEEEEEEEEET--TEEEEEEEEESS-CEEEE
T ss_pred ecCCceeeE-EEEEEcCCCchheEEEEEEcChhhhhcCCcccceeehHHhcCcccccccc--CcccEEEEEecC-cEEEE
Confidence 344555554 888863 2 4789998876 567899999886 466544432 567899998876 68899
Q ss_pred EcCCHHHHHHHHHHHHHh
Q psy4640 83 AADTRESMIQWMNALSLA 100 (109)
Q Consensus 83 sA~s~~e~~~Wi~aI~~a 100 (109)
++|++++|..|-..|+..
T Consensus 94 AFds~e~l~~W~~~l~~s 111 (224)
T 3ml4_A 94 GFDSHEAMCAWDTRIRYA 111 (224)
T ss_dssp ECSSHHHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHhhc
Confidence 999999999999999864
No 81
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=97.75 E-value=6.4e-05 Score=56.17 Aligned_cols=81 Identities=16% Similarity=0.181 Sum_probs=56.7
Q ss_pred cCCceEEeeCCeEEEEcCCCCC-c-----ccEEEEcCCeEEeecCCCCc-------------ccceeeEEEeeC---Cce
Q psy4640 21 GSDLDSIGSRNGLAVTDRFEEE-K-----LLGSILLPSYKISPCSSDDK-------------VFRKFSFKAEHA---NMR 78 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~~d~-~-----p~G~I~L~~~~V~~~~~~~~-------------~~k~~~F~i~~~---~~r 78 (109)
|+..+..|=++.|.+-+..... . ..+.|+|.++.|+...+.+. ...+++|.|.+. ..+
T Consensus 243 ~~~~~~fLF~d~Ll~~k~~~~~~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~~~~~~F~i~~~~~~~~~ 322 (346)
T 2z0q_A 243 GVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKNFFRVSFKNGSQSQ 322 (346)
T ss_dssp SCEEEEEEESSEEEEEEEEEETTEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSSEEEEEECCGGGCE
T ss_pred CcEEEEEECCCcEEEEEEeccCCceeeeeecCCcchhhceeeecCCCccccCccccccccCCcccccceEEEEecCCCCc
Confidence 3445666777777776643211 1 35789999998877654210 023578999753 357
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 79 TYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 79 ~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
.|.|+|.|.+|.+.||++|+.|+
T Consensus 323 ~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 323 THSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHhh
Confidence 99999999999999999999985
No 82
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=97.74 E-value=0.00022 Score=46.98 Aligned_cols=80 Identities=6% Similarity=-0.046 Sum_probs=53.5
Q ss_pred ceEEeeCCe-EEEEcCC--CCCcccEEEEcCCeE-EeecCCC-C------cccceeeEEEeeCCc-eEEEEEcCCHHHHH
Q psy4640 24 LDSIGSRNG-LAVTDRF--EEEKLLGSILLPSYK-ISPCSSD-D------KVFRKFSFKAEHANM-RTYYFAADTRESMI 91 (109)
Q Consensus 24 ~~~vL~~~~-L~yyk~~--~d~~p~G~I~L~~~~-V~~~~~~-~------~~~k~~~F~i~~~~~-r~y~fsA~s~~e~~ 91 (109)
..++|.++. ++||.+. ......+.|+|.+.. |...... + ......||.|...+. ++..|.|+|++|++
T Consensus 31 r~f~l~~~~~~~w~~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsIiy~~~~k~LdlvA~s~~e~~ 110 (131)
T 1mai_A 31 RFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKDQRNTLDLIAPSPADAQ 110 (131)
T ss_dssp EEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEESSSCCCEEEECSSHHHHH
T ss_pred EEEEECCCCCEEEeCCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEEEECCCCceEEEEeCCHHHHH
Confidence 345666544 5555422 134578999998874 5443210 0 112457999987653 79999999999999
Q ss_pred HHHHHHHHhhhh
Q psy4640 92 QWMNALSLASIL 103 (109)
Q Consensus 92 ~Wi~aI~~a~~~ 103 (109)
.|+..|+.....
T Consensus 111 ~Wv~gL~~L~~~ 122 (131)
T 1mai_A 111 HWVQGLRKIIHH 122 (131)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHHh
Confidence 999999986543
No 83
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=97.69 E-value=0.00012 Score=54.07 Aligned_cols=78 Identities=6% Similarity=0.060 Sum_probs=54.7
Q ss_pred CCceEEeeCCeEEEEcCCCCC------cccEEEEcCCeEEeecCCCCcccceeeEEEeeC----CceEEEEEcCCHHHHH
Q psy4640 22 SDLDSIGSRNGLAVTDRFEEE------KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA----NMRTYYFAADTRESMI 91 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d~------~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~----~~r~y~fsA~s~~e~~ 91 (109)
+..+..|=++.|.+-+...+. ...+.|+|.++.|....+. .++.|.|... ....|.|+|.|.+|++
T Consensus 222 ~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~~v~e~~~~----~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~ 297 (311)
T 1nty_A 222 RERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVEG----DPCKFALWVGRTPTSDNKIVLKASSIENKQ 297 (311)
T ss_dssp EEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGEEEECCCTT----CTTEEEEEESSSCCTTTCEEEECSSHHHHH
T ss_pred ceeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccceeeEEccCC----CCceEEEEeCCCCCCCceEEEECCCHHHHH
Confidence 344556666677666532211 2468899999988754332 2567888651 3467999999999999
Q ss_pred HHHHHHHHhhhh
Q psy4640 92 QWMNALSLASIL 103 (109)
Q Consensus 92 ~Wi~aI~~a~~~ 103 (109)
.|+++|+.|+..
T Consensus 298 ~W~~~i~~~i~e 309 (311)
T 1nty_A 298 DWIKHIREVIQE 309 (311)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999998754
No 84
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=97.68 E-value=0.00045 Score=53.64 Aligned_cols=79 Identities=10% Similarity=0.050 Sum_probs=56.8
Q ss_pred eEEeeCCeEEEEcCCCC----CcccEEEEcCCeEEeecCCCCc----ccceeeEEEeeCC-ceEEEEEcCCHHHHHHHHH
Q psy4640 25 DSIGSRNGLAVTDRFEE----EKLLGSILLPSYKISPCSSDDK----VFRKFSFKAEHAN-MRTYYFAADTRESMIQWMN 95 (109)
Q Consensus 25 ~~vL~~~~L~yyk~~~d----~~p~G~I~L~~~~V~~~~~~~~----~~k~~~F~i~~~~-~r~y~fsA~s~~e~~~Wi~ 95 (109)
+..|=++.|.+-|.... -...+.|+|.++.|....+.+. ..-+++|+|.... .+.|.|+|.|.+|.+.||+
T Consensus 354 ~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~W~~ 433 (466)
T 2pz1_A 354 MFFLFDHQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKPEQKQRWLK 433 (466)
T ss_dssp EEEEETTEEEEEEECSSCTTCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEECSSSCCEEEEEESSHHHHHHHHH
T ss_pred EEEEECCEEEEEEeccccCCceEEeeeeeccceEEEeCCCCcccccccccceeEEEEeCCCCeEEEEEeCCHHHHHHHHH
Confidence 45666777776664321 1346899999998876544221 1235789997642 5799999999999999999
Q ss_pred HHHHhhhh
Q psy4640 96 ALSLASIL 103 (109)
Q Consensus 96 aI~~a~~~ 103 (109)
+|+.|...
T Consensus 434 ~i~~a~~~ 441 (466)
T 2pz1_A 434 AFAREREQ 441 (466)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998754
No 85
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=97.67 E-value=0.00033 Score=53.51 Aligned_cols=78 Identities=19% Similarity=0.183 Sum_probs=54.6
Q ss_pred ceEEeeCCeEEEEcCCCCC------------------cccEEEEcCCeEEeecCCCCcccceeeEEEeeCC----ceEEE
Q psy4640 24 LDSIGSRNGLAVTDRFEEE------------------KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN----MRTYY 81 (109)
Q Consensus 24 ~~~vL~~~~L~yyk~~~d~------------------~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~----~r~y~ 81 (109)
.+..|=+++|.+-+...++ ...+.|+|.++.|..+... ...|.|.... .++|.
T Consensus 313 ~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~~~-----~~~f~l~~~~~~~~~~~~~ 387 (418)
T 3t06_A 313 LHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATD-----KRAFFIICTSKLGPPQIYE 387 (418)
T ss_dssp EEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECSSC-----SSEEEEEECCSSSTTCEEE
T ss_pred EEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceecccccc-----CceEEEEecCCCCCceEEE
Confidence 4567777777777643221 1236899999888754331 3467776432 37999
Q ss_pred EEcCCHHHHHHHHHHHHHhhhhccC
Q psy4640 82 FAADTRESMIQWMNALSLASILQNS 106 (109)
Q Consensus 82 fsA~s~~e~~~Wi~aI~~a~~~~~~ 106 (109)
|+|.|.+|.+.||++|+.|+..-.+
T Consensus 388 l~A~s~~ek~~W~~~I~~a~~~~~~ 412 (418)
T 3t06_A 388 LVALTSSDKNTWMELLEEAVRNAHH 412 (418)
T ss_dssp EECSSHHHHHHHHHHHHHHHHTC--
T ss_pred EEcCCHHHHHHHHHHHHHHHhcCcc
Confidence 9999999999999999999876544
No 86
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=97.60 E-value=0.00026 Score=53.34 Aligned_cols=79 Identities=9% Similarity=0.050 Sum_probs=55.4
Q ss_pred CCceEEeeCCeEEEEcCCCC---------CcccEEEEcCCeEEeecCCCCcccceeeEEEeeC----CceEEEEEcCCHH
Q psy4640 22 SDLDSIGSRNGLAVTDRFEE---------EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA----NMRTYYFAADTRE 88 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d---------~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~----~~r~y~fsA~s~~ 88 (109)
+..+..|=+++|.+=+...+ -...+.|+|..+.|....+ ..++.|.|... +...|.|.|.|.+
T Consensus 229 ~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~~----~~~~~F~i~~~~~~~~~~~~~l~a~s~~ 304 (354)
T 2rgn_B 229 RERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQ----GDPCRFALTSRGPEGGIQRYVLQAADPA 304 (354)
T ss_dssp CEEEEEEESSEEEEEEECC--------CCEEEEEEEEGGGEEEEESGG----GCTTEEEEEEECSSSCEEEEEEEESSHH
T ss_pred ceEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeeccceeeeeccC----CCCceEEEEecCCCCCceEEEEECCCHH
Confidence 44456666777776653321 1245789999888765322 22568888652 2579999999999
Q ss_pred HHHHHHHHHHHhhhhc
Q psy4640 89 SMIQWMNALSLASILQ 104 (109)
Q Consensus 89 e~~~Wi~aI~~a~~~~ 104 (109)
+.+.|+++|+.|+..+
T Consensus 305 ek~~W~~~i~~ai~~~ 320 (354)
T 2rgn_B 305 ISQAWIKHVAQILESQ 320 (354)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988654
No 87
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=97.60 E-value=0.00034 Score=52.67 Aligned_cols=77 Identities=17% Similarity=0.122 Sum_probs=54.0
Q ss_pred ceEEeeCCeEEEEcCCCC------C----cccEEEEcCCeEEeecCCCCcccceeeEEEeeC-CceEEEEEcCCHHHHHH
Q psy4640 24 LDSIGSRNGLAVTDRFEE------E----KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA-NMRTYYFAADTRESMIQ 92 (109)
Q Consensus 24 ~~~vL~~~~L~yyk~~~d------~----~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~-~~r~y~fsA~s~~e~~~ 92 (109)
.+..|=++.|.+-|.... . ...+.|+|.++.|....+ ..+++|.|... ..+.|.|+|.|.++.+.
T Consensus 240 r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~~~----~~~~~F~i~~~~~~~~~~l~a~s~~ek~~ 315 (353)
T 1kz7_A 240 RHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENVK----GDTKKFEIWYNAREEVYIIQAPTPEIKAA 315 (353)
T ss_dssp EEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCBT----TBTTEEEEEETTTTEEEEEECSSHHHHHH
T ss_pred eEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcccceeeEcCC----CCCceEEEEECCCCcEEEEECCCHHHHHH
Confidence 345566666666653321 1 235789999888765433 22578998753 35799999999999999
Q ss_pred HHHHHHHhhhhc
Q psy4640 93 WMNALSLASILQ 104 (109)
Q Consensus 93 Wi~aI~~a~~~~ 104 (109)
|+++|+.|+..+
T Consensus 316 W~~~i~~ai~~~ 327 (353)
T 1kz7_A 316 WVNAIRKVLTSQ 327 (353)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999987654
No 88
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=97.59 E-value=0.00051 Score=51.57 Aligned_cols=74 Identities=20% Similarity=0.200 Sum_probs=52.0
Q ss_pred ceEEeeCCeEEEEcCCCCC------------------cccEEEEcCCeEEeecCCCCcccceeeEEEeeC---C-ceEEE
Q psy4640 24 LDSIGSRNGLAVTDRFEEE------------------KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA---N-MRTYY 81 (109)
Q Consensus 24 ~~~vL~~~~L~yyk~~~d~------------------~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~---~-~r~y~ 81 (109)
.+..|=++.|.+-+...++ ...+.|+|.++.|..... + +.+|.|.+. + .+.|.
T Consensus 271 ~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~-~----~~~f~i~~~~~~g~~~~~~ 345 (368)
T 1xcg_A 271 LHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVAT-D----KRAFFIICTSKLGPPQIYE 345 (368)
T ss_dssp EEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECSS-C----SSEEEEEECCSSSTTCEEE
T ss_pred EEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEccceeeecccC-C----CceEEEEEecCCCCceEEE
Confidence 4556667777666543211 125789999988876432 1 346776543 2 47999
Q ss_pred EEcCCHHHHHHHHHHHHHhhh
Q psy4640 82 FAADTRESMIQWMNALSLASI 102 (109)
Q Consensus 82 fsA~s~~e~~~Wi~aI~~a~~ 102 (109)
|+|.|.+|.+.|+++|+.|+.
T Consensus 346 l~a~s~~ek~~W~~~i~~ai~ 366 (368)
T 1xcg_A 346 LVALTSSDKNTWMELLEEAVR 366 (368)
T ss_dssp EECSSHHHHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999874
No 89
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=97.58 E-value=0.00014 Score=50.78 Aligned_cols=55 Identities=13% Similarity=0.082 Sum_probs=41.0
Q ss_pred EEEEcCCeEEeecCCCCcccceeeEEEee--CCceEEEEEcCCHHHHHHHHHHHHHhhhhc
Q psy4640 46 GSILLPSYKISPCSSDDKVFRKFSFKAEH--ANMRTYYFAADTRESMIQWMNALSLASILQ 104 (109)
Q Consensus 46 G~I~L~~~~V~~~~~~~~~~k~~~F~i~~--~~~r~y~fsA~s~~e~~~Wi~aI~~a~~~~ 104 (109)
..|+|.++.|...... . +..|-|.. .+.+.|.|.|.|.+|++.||++|..|+...
T Consensus 118 pvi~L~~~~vre~a~d---~-~~~fli~~~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~ 174 (185)
T 2lg1_A 118 TVISLKKLIVREVAHE---E-KGLFLISMGMTDPEMVEVHASSKEERNSWIQIIQDTINTL 174 (185)
T ss_dssp SEEESSSCEEECCSSC---S-SEEEEECCSSSCCCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CeEeecceEEeccCCC---C-CeEEEEEecCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhC
Confidence 6789999988765431 1 22344432 246899999999999999999999998665
No 90
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=97.58 E-value=0.00064 Score=56.71 Aligned_cols=79 Identities=15% Similarity=0.130 Sum_probs=60.3
Q ss_pred cCCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCC-------ceEEEEEcCCHHHHHHH
Q psy4640 21 GSDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN-------MRTYYFAADTRESMIQW 93 (109)
Q Consensus 21 ~~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~-------~r~y~fsA~s~~e~~~W 93 (109)
.+.+|+||+...|.||||++++.-+-.++|.+..+...... ...+++.|.|-.+. .+..-++|+|.++.+.|
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 636 (772)
T 3zvr_A 558 SKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKG-FMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSW 636 (772)
T ss_dssp CCEEEEEEESSEEEEESSTTCCCEEEEEECTTEEEEEC--------CEEEEEEETTSSCSBTTBSEEEEEESSHHHHHHH
T ss_pred Cccceeeccccccccccchhhhcccccccccccccchhhhc-cccccccccccCCccccccchhhhhhhhccccccchhh
Confidence 34578999999999999988888888999999888766543 23567889986544 45778999999999999
Q ss_pred HHHHHHh
Q psy4640 94 MNALSLA 100 (109)
Q Consensus 94 i~aI~~a 100 (109)
.+.+-+|
T Consensus 637 ~~~~~~~ 643 (772)
T 3zvr_A 637 KASFLRA 643 (772)
T ss_dssp HHHHHHT
T ss_pred HHhhhhc
Confidence 9998443
No 91
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=97.56 E-value=0.0004 Score=55.66 Aligned_cols=82 Identities=20% Similarity=0.169 Sum_probs=56.3
Q ss_pred eEEeeCCeEEEEcCCCC-CcccEEEEcCCeEEeecCCCC--cccceeeEEEeeCC-ceEEEEEcCCHHHHHHHHHHHHHh
Q psy4640 25 DSIGSRNGLAVTDRFEE-EKLLGSILLPSYKISPCSSDD--KVFRKFSFKAEHAN-MRTYYFAADTRESMIQWMNALSLA 100 (109)
Q Consensus 25 ~~vL~~~~L~yyk~~~d-~~p~G~I~L~~~~V~~~~~~~--~~~k~~~F~i~~~~-~r~y~fsA~s~~e~~~Wi~aI~~a 100 (109)
+..|=++.|.|-|...+ -...+.|+|.++.|......+ ..+-++.|.|.+.. .+.|.|.|.|.+|+++||++|+.|
T Consensus 426 ~~fLF~d~Ll~~k~~~~~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~~~~L~A~S~eeK~~Wi~~I~~a 505 (587)
T 3ky9_A 426 YAFLLDKALLICKRRGDSYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMA 505 (587)
T ss_dssp EEEEETTEEEEEEEETTEEEEEEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC---CEEEESSHHHHHHHHHHHHHH
T ss_pred EEEEECCEEEEEEecCCEEEeeeeechhhceeeecCCCCcccccccceeEEEEcCCCceEEEEeCCHHHHHHHHHHHHHH
Confidence 45666667666664322 246789999999987654422 12346889998753 479999999999999999999999
Q ss_pred hhhccC
Q psy4640 101 SILQNS 106 (109)
Q Consensus 101 ~~~~~~ 106 (109)
+....+
T Consensus 506 i~~~~~ 511 (587)
T 3ky9_A 506 ISNIYP 511 (587)
T ss_dssp HHHHSC
T ss_pred hhhhcc
Confidence 866544
No 92
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=97.54 E-value=0.00043 Score=53.03 Aligned_cols=79 Identities=16% Similarity=0.154 Sum_probs=55.8
Q ss_pred eEEeeCCeEEEEcCCCC----CcccEEEEcCCeEEeecCCCCc----ccceeeEEEeeC-CceEEEEEcCCHHHHHHHHH
Q psy4640 25 DSIGSRNGLAVTDRFEE----EKLLGSILLPSYKISPCSSDDK----VFRKFSFKAEHA-NMRTYYFAADTRESMIQWMN 95 (109)
Q Consensus 25 ~~vL~~~~L~yyk~~~d----~~p~G~I~L~~~~V~~~~~~~~----~~k~~~F~i~~~-~~r~y~fsA~s~~e~~~Wi~ 95 (109)
+..|=++.|.+=|.... -...+.|+|.++.|....+.+. ..-+++|+|... ..+.|.|+|.|.+|.+.||+
T Consensus 277 ~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~Wi~ 356 (402)
T 2dfk_A 277 VFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLR 356 (402)
T ss_dssp EEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEESSSSCEEEEECSSHHHHHHHHH
T ss_pred EEEeeCCEEEEEEeccccCCceEEeeeeeccceEEEecCCCCccccccccceeEEEEECCCCeEEEEEeCCHHHHHHHHH
Confidence 45666667766664321 1356899999998876544211 112478999764 35799999999999999999
Q ss_pred HHHHhhhh
Q psy4640 96 ALSLASIL 103 (109)
Q Consensus 96 aI~~a~~~ 103 (109)
+|+.|...
T Consensus 357 ~i~~a~~~ 364 (402)
T 2dfk_A 357 AFREERKM 364 (402)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987643
No 93
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.52 E-value=0.00048 Score=50.67 Aligned_cols=56 Identities=14% Similarity=0.097 Sum_probs=44.9
Q ss_pred cEEEEcCCeEEeecCC-CCcccceeeEEEeeC-CceEEEEEcCCHHHHHHHHHHHHHhhh
Q psy4640 45 LGSILLPSYKISPCSS-DDKVFRKFSFKAEHA-NMRTYYFAADTRESMIQWMNALSLASI 102 (109)
Q Consensus 45 ~G~I~L~~~~V~~~~~-~~~~~k~~~F~i~~~-~~r~y~fsA~s~~e~~~Wi~aI~~a~~ 102 (109)
.+.|+|.-|.+..... .| ++.++|+|..+ +..+.+|.|+|.+++.+|+++|..++.
T Consensus 205 ~~~ipL~m~~~tR~~~~~d--~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i~ 262 (263)
T 1z87_A 205 AKHVSLKMAYVSRRCTPTD--PEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 262 (263)
T ss_dssp CEEEESSSEEEEEECCSSC--SSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred ccccCcceeeeeeeccccC--CCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHhc
Confidence 4789999998765322 23 36899999876 556799999999999999999998763
No 94
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=97.51 E-value=1.4e-05 Score=62.35 Aligned_cols=57 Identities=18% Similarity=0.233 Sum_probs=0.0
Q ss_pred cEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhhhhc
Q psy4640 45 LGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASILQ 104 (109)
Q Consensus 45 ~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~~~~ 104 (109)
.+.|+|.+..|....+. ...+++|.|..++ ++|.|+|.|.+|++.|+++|+.|+...
T Consensus 308 k~~i~l~~~~v~~~~d~--~~~~~~F~i~~~~-~~~~l~a~s~~ek~~W~~~i~~ai~~~ 364 (510)
T 3jzy_A 308 KTPIFLNEVLVKLPTDP--SSDEPVFHISHID-RVYTLRTDNINERTAWVQKIKAASEQY 364 (510)
T ss_dssp ------------------------------------------------------------
T ss_pred cCceehhheEEeccCCC--Cccccceeeeccc-eeEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 46788888877665332 2457899998765 799999999999999999999988654
No 95
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=97.50 E-value=0.00062 Score=51.53 Aligned_cols=56 Identities=16% Similarity=0.189 Sum_probs=42.3
Q ss_pred cEEEEcCCeEEeecCCCCcccceeeEEEee--CCceEEEEEcCCHHHHHHHHHHHHHhhhhc
Q psy4640 45 LGSILLPSYKISPCSSDDKVFRKFSFKAEH--ANMRTYYFAADTRESMIQWMNALSLASILQ 104 (109)
Q Consensus 45 ~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~--~~~r~y~fsA~s~~e~~~Wi~aI~~a~~~~ 104 (109)
.+.|+|.++.|..+.. + .+..|.|.. .+.+.|.|+|.|.+|.+.||++|+.|+...
T Consensus 314 ~~~i~l~~~~v~~~~~-d---~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~ 371 (385)
T 1txd_A 314 SPVIKLSTVLVRQVAT-D---NKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASV 371 (385)
T ss_dssp CSEEEGGGEEEEECCC-----CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCceeccccccccccc-C---CceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 5789999988876533 1 134555543 346899999999999999999999988654
No 96
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=97.37 E-value=0.0015 Score=49.22 Aligned_cols=60 Identities=12% Similarity=0.089 Sum_probs=44.2
Q ss_pred ccEEEEcCCeEEeecCCCCcccceeeEEEee-------CCceEEEEEcCCHHHHHHHHHHHHHhhhhc
Q psy4640 44 LLGSILLPSYKISPCSSDDKVFRKFSFKAEH-------ANMRTYYFAADTRESMIQWMNALSLASILQ 104 (109)
Q Consensus 44 p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~-------~~~r~y~fsA~s~~e~~~Wi~aI~~a~~~~ 104 (109)
..+.|+|.++.|....+.+. .....|.|.+ ...+.|.|+|.|.+|.++||++|..|+...
T Consensus 302 ~k~~i~l~~~~v~~~~~~~~-~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~ 368 (377)
T 1foe_A 302 FRHMIPTEALQVRALPSADA-EANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDK 368 (377)
T ss_dssp CEEEEEGGGEEEECCCCTTT-TSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EeeeccccceEEEecCCCcc-chhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHH
Confidence 45889999999877654332 1123477752 124799999999999999999999988553
No 97
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=97.35 E-value=0.00068 Score=57.99 Aligned_cols=79 Identities=14% Similarity=0.130 Sum_probs=58.6
Q ss_pred CCceEEeeCCeEEEEcCCCC-----------CcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHH
Q psy4640 22 SDLDSIGSRNGLAVTDRFEE-----------EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESM 90 (109)
Q Consensus 22 ~~~~~vL~~~~L~yyk~~~d-----------~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~ 90 (109)
+..+..|=++.|.+-|.... -...+.|+|.++.|....+.+ .-+++|.|.+.+...|.|.|.|.+|+
T Consensus 457 ~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~~--~~~~~F~I~~~~~~~~~L~A~S~eeK 534 (1049)
T 3ksy_A 457 HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTN--EYKHAFEIILKDENSVIFSAKSAEEK 534 (1049)
T ss_dssp SCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCSS--SCCSEEEECCTTSCCEEEECSSHHHH
T ss_pred ceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCCc--cccceEEEEcCCCCEEEEeCCCHHHH
Confidence 34456677777777764422 245689999998876654432 34689999876667999999999999
Q ss_pred HHHHHHHHHhhh
Q psy4640 91 IQWMNALSLASI 102 (109)
Q Consensus 91 ~~Wi~aI~~a~~ 102 (109)
++||++|+.+..
T Consensus 535 ~~Wi~~I~~~q~ 546 (1049)
T 3ksy_A 535 NNWMAALISLQY 546 (1049)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999987653
No 98
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=97.34 E-value=0.00087 Score=53.37 Aligned_cols=57 Identities=14% Similarity=0.139 Sum_probs=42.3
Q ss_pred EEEEcCCeEEeecCCCCcccceeeEEEee---CCceEEEEEcCCHHHHHHHHHHHHHhhhhccCC
Q psy4640 46 GSILLPSYKISPCSSDDKVFRKFSFKAEH---ANMRTYYFAADTRESMIQWMNALSLASILQNSS 107 (109)
Q Consensus 46 G~I~L~~~~V~~~~~~~~~~k~~~F~i~~---~~~r~y~fsA~s~~e~~~Wi~aI~~a~~~~~~~ 107 (109)
..|+|.++.|+.+..+ ...|.+.. .+.+.|.|.|.|.+|++.||++|+.|+......
T Consensus 470 ~~i~L~~l~v~e~~~d-----~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~~~ 529 (536)
T 3odw_A 470 PVLRLTSAMTREVATD-----HKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLKVP 529 (536)
T ss_dssp SEEEGGGEEEEECTTC-----TTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSCCC
T ss_pred ceeecccceeeccccc-----CCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCCCc
Confidence 4799999988775442 12344433 245799999999999999999999998765543
No 99
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=97.09 E-value=0.0023 Score=48.02 Aligned_cols=55 Identities=15% Similarity=0.120 Sum_probs=41.2
Q ss_pred EEEEcCCeEEeecCCCCcccceeeEEEee--CCceEEEEEcCCHHHHHHHHHHHHHhhhhc
Q psy4640 46 GSILLPSYKISPCSSDDKVFRKFSFKAEH--ANMRTYYFAADTRESMIQWMNALSLASILQ 104 (109)
Q Consensus 46 G~I~L~~~~V~~~~~~~~~~k~~~F~i~~--~~~r~y~fsA~s~~e~~~Wi~aI~~a~~~~ 104 (109)
..|+|.+..|+.+..+ ....|.+.. .+.+.|.|.|.|.+|.+.||++|+.|+...
T Consensus 317 ~~i~l~~~~v~e~~~~----~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~~ 373 (377)
T 3p6a_A 317 PVLRLTSAMTREVATD----HKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSL 373 (377)
T ss_dssp SEEEGGGEEEEECTTC----TTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred CeEechhhhccccccc----cceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 4799998888765442 123344433 356789999999999999999999998654
No 100
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.00 E-value=0.035 Score=38.67 Aligned_cols=55 Identities=15% Similarity=0.128 Sum_probs=43.3
Q ss_pred cEEEEcCCeEEeec-CCCCcccceeeEEEeeC-CceEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 45 LGSILLPSYKISPC-SSDDKVFRKFSFKAEHA-NMRTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 45 ~G~I~L~~~~V~~~-~~~~~~~k~~~F~i~~~-~~r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
...|||.=|.|..- ...| ++..+|+|..+ +..+-.|.|.+..+++.|+++|...+
T Consensus 120 ~~~IPLkMayvtR~~~~tD--~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni 176 (178)
T 2adz_A 120 AKHVSLKMAYVSRRCTPTD--PEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQI 176 (178)
T ss_dssp CEEEETTTCEEEEECCSSC--CSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred ceeecHHHHHHHHhccCCC--CCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhc
Confidence 47899998887653 2233 25679999765 45688999999999999999998865
No 101
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=93.20 E-value=0.053 Score=35.17 Aligned_cols=55 Identities=16% Similarity=0.218 Sum_probs=40.1
Q ss_pred ccEEEEcCCeEEeecCCCCcccceeeEEEeeCC-ceEEEE--EcCCHH-HHHHHHHHHHHhh
Q psy4640 44 LLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN-MRTYYF--AADTRE-SMIQWMNALSLAS 101 (109)
Q Consensus 44 p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~-~r~y~f--sA~s~~-e~~~Wi~aI~~a~ 101 (109)
-+..|.|+++.|+....+ +.+..|+|..++ ...|.+ +|.|.+ ..+.|++.|+.+.
T Consensus 53 ~K~~ikl~~~~lte~~~~---~d~~kFeiw~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~ 111 (119)
T 1fho_A 53 HYSSIRLDKYNIRQHTTD---EDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQ 111 (119)
T ss_dssp SCCEEESSSCEEEEECTT---CCEEEEECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCC
T ss_pred EeeEEeeceeEEEecCCC---CCCcEEEEccCCCCceEEEeeecCCcHHHHHHHHHHHHHHH
Confidence 346899998888654331 124569986544 456777 899999 9999999999843
No 102
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=89.89 E-value=2.8 Score=34.54 Aligned_cols=69 Identities=12% Similarity=0.131 Sum_probs=48.0
Q ss_pred EeeCCeEEEEcCCCCCcccEEEEcCCeE-EeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 27 IGSRNGLAVTDRFEEEKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 27 vL~~~~L~yyk~~~d~~p~G~I~L~~~~-V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
.|..+.|-+..+. ..+...+.++... |.... .+..++|.+...+.++|++.++|..++.+|.++|+.+-
T Consensus 582 ~l~p~r~e~~~e~--~~~~~l~~~~~v~~v~k~~----i~~~~~l~~~~k~~k~f~~~t~~~~~~~~W~~~i~~~~ 651 (689)
T 3v5w_A 582 YLFPNRLEWRGEG--EAPQSLLTMEEIQSVEETQ----IKERKCLLLKIRGGKQFILQCDSDPELVQWKKELRDAY 651 (689)
T ss_dssp EEETTEEEEECTT--SCCCEEEEGGGEEEEEEEE----SSSCEEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ccCCCcccccccC--CCCcceeeeccccccccCc----CCCCcceeeeecCCcEEEEECCChHHHHHHHHHHHHHH
Confidence 4455555555432 4555667776643 32221 23457899888888999999999999999999998654
No 103
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=75.86 E-value=13 Score=23.99 Aligned_cols=39 Identities=18% Similarity=0.184 Sum_probs=30.9
Q ss_pred ceeeEEEee-----CCceEEEEEcCCHHHHHHHHHHHHHhhhhc
Q psy4640 66 RKFSFKAEH-----ANMRTYYFAADTRESMIQWMNALSLASILQ 104 (109)
Q Consensus 66 k~~~F~i~~-----~~~r~y~fsA~s~~e~~~Wi~aI~~a~~~~ 104 (109)
.+..|+|.- ...+.|+|-|.|.+|+.+=|..|+.....+
T Consensus 73 ~P~~FKivV~k~~~~e~KrYdfEA~s~~ea~EIV~~ik~~~~~Y 116 (121)
T 3ulb_A 73 VPEHFKIFVRREGQDDIKRYYFEAVSGQECTEIVTRLQNLLSAY 116 (121)
T ss_dssp CTTEEEEEECCTTCSSCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEccCCCCcceeEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 355688742 235789999999999999999999877654
No 104
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=74.24 E-value=15 Score=30.77 Aligned_cols=35 Identities=9% Similarity=0.043 Sum_probs=27.6
Q ss_pred eeeEEEeeCCc----eEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 67 KFSFKAEHANM----RTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 67 ~~~F~i~~~~~----r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
.-+|.|+.... ....|.|+|.++.+.|+..|+..+
T Consensus 103 ~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~ 141 (816)
T 3qr0_A 103 DKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYA 141 (816)
T ss_dssp HHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred ccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHH
Confidence 35899986432 344899999999999999998754
No 105
>1j0w_A Downstream of tyrosine kinase 5; beta strands, ALFA helix, transferase; 2.50A {Homo sapiens} SCOP: b.55.1.2
Probab=69.41 E-value=18 Score=22.58 Aligned_cols=88 Identities=18% Similarity=0.129 Sum_probs=57.3
Q ss_pred CCCCCcccccCCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEe---eCCceEEEEEcCCHH
Q psy4640 12 SSPSSRKSVGSDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAE---HANMRTYYFAADTRE 88 (109)
Q Consensus 12 ~~~~~~~~~~~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~---~~~~r~y~fsA~s~~ 88 (109)
..|+..+-..++-+-.|..+.|..+.......+....+|.. +....-. +..|+|+.- ..+.-.|.|.+...+
T Consensus 11 v~ps~~~~l~G~~~L~l~~~~l~L~~~~~~~~~l~~Wp~~~--LRRyG~~---~~~FsFEaGRrC~tG~G~f~F~~~~~~ 85 (103)
T 1j0w_A 11 LMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWPLSA--LRRYGRD---TTWFTFEAGRMCETGEGLFIFQTRDGE 85 (103)
T ss_dssp ECCCSSCSCCEEEEEEECSSEEEEEESSSTTBEEEEEEGGG--EEEEEEC---SSEEEEEECSSSSSCSEEEEEECSCHH
T ss_pred EEeCCCCCCCccEEEEECCCEEEEEecCCCCcceEEeeHHH--HhhcCcc---CCEEEEEeCCCCCCCCcEEEEEcCCHH
Confidence 34444444444445677889998887655456888899973 3332221 236778763 235569999999999
Q ss_pred HHHHHHHHHHHhhhhc
Q psy4640 89 SMIQWMNALSLASILQ 104 (109)
Q Consensus 89 e~~~Wi~aI~~a~~~~ 104 (109)
+.-+=|.+...|+..+
T Consensus 86 ~If~~v~~ai~a~~~~ 101 (103)
T 1j0w_A 86 AIYQKVHSAALAIAEL 101 (103)
T ss_dssp HHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9877777666665444
No 106
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=68.91 E-value=10 Score=26.43 Aligned_cols=34 Identities=15% Similarity=0.236 Sum_probs=29.3
Q ss_pred eeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 68 FSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 68 ~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
..|.|........-|.|+|+++...|++-|+.-.
T Consensus 116 laFSii~~~~~~L~fvA~s~~~~~~W~DGL~~Ll 149 (203)
T 3a98_B 116 LAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALL 149 (203)
T ss_dssp GEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHT
T ss_pred eEEEEecCCCceEEEecCCHHHHHHHHHHHHHHh
Confidence 4799877655899999999999999999998754
No 107
>4emo_A Sharpin; pleckstrin homology (PH) domain, lubac, SIPL1, linear ubiqui HOIL-1L, HOIP, protein binding; 2.00A {Homo sapiens}
Probab=66.91 E-value=10 Score=24.56 Aligned_cols=35 Identities=9% Similarity=0.094 Sum_probs=24.8
Q ss_pred eeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhhh
Q psy4640 68 FSFKAEHANMRTYYFAADTRESMIQWMNALSLASI 102 (109)
Q Consensus 68 ~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~~ 102 (109)
+-.....++.-++-|.--+.+|.++|-..++.+..
T Consensus 89 hELqpp~~gpg~lsl~F~~~qeAQrWA~lv~~a~~ 123 (129)
T 4emo_A 89 HELQPPPGGPGTLSMHFLNPQEAQRWAVLVRGATV 123 (129)
T ss_dssp EEEECCTTSSCCEEEEESSHHHHHHHHHHHHHHCC
T ss_pred ccccCCCCCCCeEEEeeCCHHHHHHHHHHHHhhhc
Confidence 33333334455788888999999999877777654
No 108
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=58.14 E-value=64 Score=25.70 Aligned_cols=77 Identities=8% Similarity=0.059 Sum_probs=51.7
Q ss_pred EeeCCeEEEEcCCCCCcccEEEEcCCe-EEeecCCC-CcccceeeEEEeeCCceEEEEEcCCH-HHHHHHHHHHHHhhhh
Q psy4640 27 IGSRNGLAVTDRFEEEKLLGSILLPSY-KISPCSSD-DKVFRKFSFKAEHANMRTYYFAADTR-ESMIQWMNALSLASIL 103 (109)
Q Consensus 27 vL~~~~L~yyk~~~d~~p~G~I~L~~~-~V~~~~~~-~~~~k~~~F~i~~~~~r~y~fsA~s~-~e~~~Wi~aI~~a~~~ 103 (109)
.|++..|++-..+.+....-.|+|... .|+.+... ......+.+.|..++.|.+.|.-+.+ +++.++.++|...+.+
T Consensus 37 ~lTn~rLiF~~~~~~~~~~~~iPL~~I~~vek~~~~s~~~~~~~~l~I~CKDfr~~~f~f~~~~~~~~~v~~~L~~~~~p 116 (528)
T 1zsq_A 37 TVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVCKDIRNLRFAHKPEGRTRRSIFENLMKYAFP 116 (528)
T ss_dssp EEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEETTTEEEEEECCGGGCCHHHHHHHHHHHSCT
T ss_pred EEECCEEEEEccCCCccEEEEeeccceEEEEEcCCCCcCCCCCceEEEEccCCeEEEEEecCchHHHHHHHHHHHHHhcC
Confidence 678888876665544444567777544 45544321 11123567999999999999999877 4488999999886543
No 109
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=57.51 E-value=11 Score=31.46 Aligned_cols=35 Identities=6% Similarity=-0.024 Sum_probs=28.2
Q ss_pred eeEEEeeCCc----eEEEEEcCCHHHHHHHHHHHHHhhh
Q psy4640 68 FSFKAEHANM----RTYYFAADTRESMIQWMNALSLASI 102 (109)
Q Consensus 68 ~~F~i~~~~~----r~y~fsA~s~~e~~~Wi~aI~~a~~ 102 (109)
-+|.|..... .+..|.|+|+++++.|++.|+..+.
T Consensus 97 ~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~ 135 (799)
T 2zkm_X 97 KTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVK 135 (799)
T ss_dssp TEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred ceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 4799886443 3689999999999999999987553
No 110
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=57.18 E-value=36 Score=23.21 Aligned_cols=68 Identities=10% Similarity=0.119 Sum_probs=45.4
Q ss_pred CCeEEEEcCCCCC---c-ccEEEEcCCeE-EeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhhhhc
Q psy4640 30 RNGLAVTDRFEEE---K-LLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASILQ 104 (109)
Q Consensus 30 ~~~L~yyk~~~d~---~-p~G~I~L~~~~-V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~~~~ 104 (109)
...++.+|..... - .-.+.+|.+.+ |+...+ ....|.|.. + ++||..|++.+|+..+|.+|-+.-..+
T Consensus 78 sgrV~lhK~K~N~ngsfsiGkTW~L~ELk~Ie~~~~-----~~~gF~ltl-~-K~Y~W~a~s~~Er~~FI~sL~K~y~ky 150 (171)
T 3hie_A 78 AKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDLE-----ISEGFILTM-S-KKYYWETNSAKERTVFIKSLITLYIQT 150 (171)
T ss_dssp TTCEEEEEEEECTTSCEEEEEEEEGGGCCEEEECSS-----CTTEEEEES-S-SEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEEEECCCCcEEeeeeeecccceeeeccCC-----CCCcEEEEe-C-CeEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 4567888754322 1 22467777664 443222 134677765 3 799999999999999999998866544
No 111
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=56.43 E-value=70 Score=26.27 Aligned_cols=76 Identities=8% Similarity=0.070 Sum_probs=47.9
Q ss_pred EeeCCeEEEEcCCCCCcccEEEEcCCe-EEeecCCC-CcccceeeEEEeeCCceEEEEEcCCH-HHHHHHHHHHHHhhh
Q psy4640 27 IGSRNGLAVTDRFEEEKLLGSILLPSY-KISPCSSD-DKVFRKFSFKAEHANMRTYYFAADTR-ESMIQWMNALSLASI 102 (109)
Q Consensus 27 vL~~~~L~yyk~~~d~~p~G~I~L~~~-~V~~~~~~-~~~~k~~~F~i~~~~~r~y~fsA~s~-~e~~~Wi~aI~~a~~ 102 (109)
.|++..|++-..+.+....-.|+|... .|+.+... ......+.+.|..++.|.+.|.-..+ +++.++.++|...+.
T Consensus 109 ~lTnyrLiF~~~~~~~~~~~~IPL~~I~~Iekv~g~s~~g~~~~~l~I~CKDfR~~~f~f~~~~~~~~~v~~~L~~~~~ 187 (657)
T 1lw3_A 109 TVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVCKDIRNLRFAHKPEGRTRRSIFENLMKYAF 187 (657)
T ss_dssp EEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEETTTEEEEEECCGGGCCHHHHHHHHHHHHS
T ss_pred EEECCEEEEEecCCCcceEEEecccceEEEEecCCCcccCCCCceEEEEecCCcEEEEEeCCccchHHHHHHHHHHHhC
Confidence 567777765554434333445666543 35443211 11123467899999999999999877 448899999987654
No 112
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=56.22 E-value=74 Score=25.25 Aligned_cols=71 Identities=15% Similarity=0.057 Sum_probs=49.4
Q ss_pred EeeCCeEEEEcCCCCCcccEEEEcCCe-EEeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhhhh
Q psy4640 27 IGSRNGLAVTDRFEEEKLLGSILLPSY-KISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASIL 103 (109)
Q Consensus 27 vL~~~~L~yyk~~~d~~p~G~I~L~~~-~V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~~~ 103 (109)
.|++..|.+..+..+ .-.|++... .|+.... ..+.+.+.|..++.|.+.|.-+++++..++.+.|...+.+
T Consensus 30 ~lTn~~LiF~~~~~~---e~wi~~~~I~~VeK~~~---~~~~~~l~I~CKDfr~~~f~f~~~~~~~~v~~sL~~~~~p 101 (512)
T 2yf0_A 30 YLTATHLLFIDSHQK---ETWILHHHIASVEKLAL---TTSGCPLVIQCKNFRTVHFIVPRERDCHDIYNSLLQLSKQ 101 (512)
T ss_dssp EECSSEEEEEESSSC---EEEEEGGGEEEEEECCC---BTTBEEEEEEETTSCEEEEEESCHHHHHHHHHHHHHHSCC
T ss_pred EEECCEEEEeCCCCC---ceEecccceeEEEEecC---CCCCceEEEEecCCcEEEEEeCChHHHHHHHHHHHhhcCC
Confidence 567878776663221 234555433 3544322 1334679999999999999999999999999999887654
No 113
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=56.17 E-value=40 Score=28.60 Aligned_cols=35 Identities=11% Similarity=0.059 Sum_probs=28.1
Q ss_pred eeEEEeeCCc----eEEEEEcCCHHHHHHHHHHHHHhhh
Q psy4640 68 FSFKAEHANM----RTYYFAADTRESMIQWMNALSLASI 102 (109)
Q Consensus 68 ~~F~i~~~~~----r~y~fsA~s~~e~~~Wi~aI~~a~~ 102 (109)
.+|.|+.... ....|.|.|+++.+.|++.|+..+.
T Consensus 101 r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~ 139 (885)
T 3ohm_B 101 KLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAM 139 (885)
T ss_dssp TEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred cEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHh
Confidence 4799986543 3689999999999999999987543
No 114
>2dlw_A Docking protein 2, isoform A; IRS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.26 E-value=37 Score=21.48 Aligned_cols=81 Identities=14% Similarity=0.065 Sum_probs=50.9
Q ss_pred CceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEe---eCCceEEEEEcCCHHHHHHHHHHHHH
Q psy4640 23 DLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAE---HANMRTYYFAADTRESMIQWMNALSL 99 (109)
Q Consensus 23 ~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~---~~~~r~y~fsA~s~~e~~~Wi~aI~~ 99 (109)
..+-.+.+++|..+++.....+....+|.- +....- + +..|+|+.- ..+.-.|.|.+...+++-+=|++...
T Consensus 29 ~y~L~l~~~~l~L~~~~~~~~~l~~Wpl~~--LRryG~-d--~~~FsfEaGRrC~tGeG~f~F~t~~~~~if~~l~~~i~ 103 (113)
T 2dlw_A 29 SYTLRAGESALELWGGPEPGTQLYDWPYRF--LRRFGR-D--KVTFSFEAGRRCVSGEGNFEFETRQGNEIFLALEEAIS 103 (113)
T ss_dssp EEEEEECSSBEECCCSSSSCCCSSCCBGGG--CCCEEE-E--TTEEEEEECSSCSSCSEEEEECCSTHHHHHHHHHHHHH
T ss_pred cEEEEEcCCEEEEEecCCCCCceEEEEhHH--hhhcCc-c--CCEEEEEecCCCCCCCCEEEEEcCCHHHHHHHHHHHHH
Confidence 344567889998888877777888888853 212111 1 236788763 24556999999999988555555444
Q ss_pred hhhhccCCC
Q psy4640 100 ASILQNSST 108 (109)
Q Consensus 100 a~~~~~~~~ 108 (109)
+.....|..
T Consensus 104 ~~~~~~~~~ 112 (113)
T 2dlw_A 104 AQKNSGPSS 112 (113)
T ss_dssp HHHHSCCCC
T ss_pred HhcccCCCC
Confidence 333333443
No 115
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=50.99 E-value=52 Score=21.89 Aligned_cols=72 Identities=17% Similarity=0.154 Sum_probs=46.1
Q ss_pred ccccc--CCceEEeeCCeEEEEcCCCCCcccEEEEcCCeEEeecCCCCcccceeeEEEeeCCce---EEEEEcCCHHH
Q psy4640 17 RKSVG--SDLDSIGSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMR---TYYFAADTRES 89 (109)
Q Consensus 17 ~~~~~--~~~~~vL~~~~L~yyk~~~d~~p~G~I~L~~~~V~~~~~~~~~~k~~~F~i~~~~~r---~y~fsA~s~~e 89 (109)
++.|| ++...+|.++.|-.+..++ +..+-..+|....+.-+...+...+.|.|....++.+ -+.|.|+...+
T Consensus 48 ~~~wg~gq~~~L~v~~~tlrLvD~~t-k~~L~~~pI~~I~f~~~gr~~~~~~dFAfv~rd~~t~~~~CHvFrCe~~a~ 124 (148)
T 3d8d_A 48 SGGWGEGKDLLLQLEDETLKLVEPQS-QALLHAQPIISIRVWGVGRDSGRERDFAYVARDKLTQMLKCHVFRCEAPAK 124 (148)
T ss_dssp STTCSTTCEEEEEEETTEEEEECTTT-CCEEEEEEGGGCCEEEECCCC--CCEEEEEEECTTTCCEEEEEEEESSCHH
T ss_pred ccccccCceEEEEEcCCeEEEecCCC-CceEEEeeEEEEEEEeCCCCCCccccEEEEEecCCCcceEeEEEEcCCchH
Confidence 34444 5556688999999987664 6778899998777655544332223577776544433 35688886654
No 116
>3voq_A Target of rapamycin complex 2 subunit mapkap1; PH domain, membrane protein; 2.00A {Homo sapiens}
Probab=48.57 E-value=42 Score=21.76 Aligned_cols=36 Identities=14% Similarity=0.240 Sum_probs=27.5
Q ss_pred eeEEEe---eCCceEEEEEcCCHHHHHHHHHHHHHhhhhc
Q psy4640 68 FSFKAE---HANMRTYYFAADTRESMIQWMNALSLASILQ 104 (109)
Q Consensus 68 ~~F~i~---~~~~r~y~fsA~s~~e~~~Wi~aI~~a~~~~ 104 (109)
-.|+|. ....+.|.|-|++ ++..+=+..|+......
T Consensus 83 ~~Fklv~~~~~~~KryDFEa~~-~~A~EIV~kin~ILe~r 121 (125)
T 3voq_A 83 AIFKLTYLSNHDYKHLYFESDA-ATVNEIVLKVNYILESR 121 (125)
T ss_dssp EEEEEEEEETTEEEEEEEEECH-HHHHHHHHHHHHHHHTC
T ss_pred ceEEEEEeCCCCcccceeEcCc-ccHHHHHHHHhhheeec
Confidence 467764 2346889999999 99999999998865443
No 117
>3ro3_B Minsc, peptide of protein inscuteable homolog; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=45.61 E-value=16 Score=16.43 Aligned_cols=15 Identities=33% Similarity=0.714 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHhh
Q psy4640 87 RESMIQWMNALSLAS 101 (109)
Q Consensus 87 ~~e~~~Wi~aI~~a~ 101 (109)
-+..++||+-|+..+
T Consensus 7 vDSV~rWmeDLr~MT 21 (22)
T 3ro3_B 7 VDSVQRWMEDLKLMT 21 (26)
T ss_pred hHHHHHHHHHHHhhc
Confidence 356789999998653
No 118
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=39.27 E-value=39 Score=25.31 Aligned_cols=68 Identities=10% Similarity=0.131 Sum_probs=43.9
Q ss_pred CCeEEEEcCCCCC----cccEEEEcCCeE-EeecCCCCcccceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhhhhc
Q psy4640 30 RNGLAVTDRFEEE----KLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASILQ 104 (109)
Q Consensus 30 ~~~L~yyk~~~d~----~p~G~I~L~~~~-V~~~~~~~~~~k~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~~~~ 104 (109)
...++++|..... +......|.+.+ |+..-. ....|.|.. .+.||..|++.+|++-+|..|-+.-..+
T Consensus 148 sGRV~LhKaKeN~ngsFsIGKTW~L~ELk~Id~~~~-----~~~gF~LTl--~K~YyW~A~s~kER~~FI~sLvKiy~KY 220 (320)
T 3a58_A 148 AKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDLE-----ISEGFILTM--SKKYYWETNSAKERTVFIKSLITLYIQT 220 (320)
T ss_dssp TTCEEEEEEEECGGGCEEEEEEEEGGGCCEEEECSS-----CTTEEEEES--SSEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEEecCCCceEecceechhhhhhhhcccC-----CCCceEEEe--CCceEEecCCHHHHHHHHHHHHHHHHHH
Confidence 4467888754322 122466776654 442101 124677764 3799999999999999999998865443
No 119
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=32.68 E-value=26 Score=16.30 Aligned_cols=17 Identities=29% Similarity=0.548 Sum_probs=12.1
Q ss_pred EeeCCceEEEEEcCCHH
Q psy4640 72 AEHANMRTYYFAADTRE 88 (109)
Q Consensus 72 i~~~~~r~y~fsA~s~~ 88 (109)
+.....|.||+.+.+.+
T Consensus 5 ~~~~~g~~YYyN~~T~~ 21 (27)
T 1e0n_A 5 IIHENGRPLYYNAEQKT 21 (27)
T ss_dssp EEESSSSEEEEETTTTE
T ss_pred EECCCCCeEEEECCCCC
Confidence 34556789999887754
No 120
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=26.72 E-value=91 Score=17.53 Aligned_cols=35 Identities=9% Similarity=0.182 Sum_probs=27.4
Q ss_pred cceeeEEEeeCCceEEEEEcC---CHHHHHHHHHHHHHh
Q psy4640 65 FRKFSFKAEHANMRTYYFAAD---TRESMIQWMNALSLA 100 (109)
Q Consensus 65 ~k~~~F~i~~~~~r~y~fsA~---s~~e~~~Wi~aI~~a 100 (109)
..+|.|.|...+.++.. +.+ |..++..-|+.|+..
T Consensus 10 ~G~frfrLka~NGevI~-sSe~Y~sk~~a~~gI~sVk~n 47 (64)
T 3bid_A 10 KGEYRWRLKAANHEIIA-QGEGYTSKQNCQHAVDLLKST 47 (64)
T ss_dssp TSCEEEEEECTTSCEEE-ECCCBSCHHHHHHHHHHHHTC
T ss_pred CCCEEEEEEeCCCCEEE-ECCCcCCHHHHHHHHHHHHHh
Confidence 34799999887777665 655 788999999998864
No 121
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=26.31 E-value=82 Score=18.89 Aligned_cols=24 Identities=21% Similarity=0.189 Sum_probs=20.5
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 78 RTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 78 r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
-.+.|.++|.++.+.|.+.|..+-
T Consensus 77 ~~~~f~v~~~~dv~~~~~~l~~~G 100 (141)
T 2rbb_A 77 FLLNFDVDTKEAVDKLVPVAIAAG 100 (141)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTT
T ss_pred EEEEEEcCCHHHHHHHHHHHHHcC
Confidence 368899999999999999998753
No 122
>1mwq_A Hypothetical protein HI0828; YCII_HAEIN, structural genomic structure 2 function project, S2F, unknown function; HET: MSE 1PE; 0.99A {Haemophilus influenzae} SCOP: d.58.4.7
Probab=25.61 E-value=56 Score=19.30 Aligned_cols=20 Identities=10% Similarity=0.112 Sum_probs=16.8
Q ss_pred eEEEEEcCCHHHHHHHHHHH
Q psy4640 78 RTYYFAADTRESMIQWMNAL 97 (109)
Q Consensus 78 r~y~fsA~s~~e~~~Wi~aI 97 (109)
=.+.+.|+|.++..+|++..
T Consensus 62 g~~i~~a~s~eea~~~~~~d 81 (101)
T 1mwq_A 62 STVIAQFENLQAAKDWAAQD 81 (101)
T ss_dssp EEEEEECSSHHHHHHHHHTC
T ss_pred EEEEEEeCCHHHHHHHHHhC
Confidence 35778999999999999854
No 123
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=24.50 E-value=1.2e+02 Score=18.09 Aligned_cols=25 Identities=16% Similarity=-0.041 Sum_probs=21.2
Q ss_pred CceEEEEEcCCHHHHHHHHHHHHHh
Q psy4640 76 NMRTYYFAADTRESMIQWMNALSLA 100 (109)
Q Consensus 76 ~~r~y~fsA~s~~e~~~Wi~aI~~a 100 (109)
+...+.|.++|.++++.+.+.|..+
T Consensus 71 ~~~~l~f~v~~~~dv~~~~~~l~~~ 95 (138)
T 2a4x_A 71 HRFAIAFEFPDTASVDKKYAELVDA 95 (138)
T ss_dssp CSEEEEEECSSHHHHHHHHHHHHHT
T ss_pred CeEEEEEEeCCHHHHHHHHHHHHHC
Confidence 3356889999999999999999875
No 124
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=24.13 E-value=49 Score=16.31 Aligned_cols=15 Identities=40% Similarity=0.660 Sum_probs=11.0
Q ss_pred eCCceEEEEEcCCHH
Q psy4640 74 HANMRTYYFAADTRE 88 (109)
Q Consensus 74 ~~~~r~y~fsA~s~~ 88 (109)
.++.|.||+.+.+.+
T Consensus 13 ~~~G~~YYyN~~T~e 27 (37)
T 1e0l_A 13 TADGKTYYYNNRTLE 27 (37)
T ss_dssp CTTSCEEEEETTTTE
T ss_pred CCCCCEEEEECCCCC
Confidence 456789999887654
No 125
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=24.03 E-value=59 Score=16.44 Aligned_cols=15 Identities=33% Similarity=0.813 Sum_probs=11.5
Q ss_pred eCCceEEEEEcCCHH
Q psy4640 74 HANMRTYYFAADTRE 88 (109)
Q Consensus 74 ~~~~r~y~fsA~s~~ 88 (109)
.++.+.||+.+.+.+
T Consensus 19 ~~~G~~YYyN~~T~e 33 (41)
T 1ywi_A 19 SPDGRTYYYNTETKQ 33 (41)
T ss_dssp ETTTEEEEEETTTTE
T ss_pred CCCCCEEEEECCCCC
Confidence 456799999887754
No 126
>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7
Probab=23.77 E-value=93 Score=18.92 Aligned_cols=22 Identities=14% Similarity=0.338 Sum_probs=19.4
Q ss_pred ceEEEEEcCCHHHHHHHHHHHH
Q psy4640 77 MRTYYFAADTRESMIQWMNALS 98 (109)
Q Consensus 77 ~r~y~fsA~s~~e~~~Wi~aI~ 98 (109)
.-..+|.++|++|.+...+.+.
T Consensus 79 ~~~l~~~v~d~~evd~~~~~l~ 100 (136)
T 1u7i_A 79 AFSFFVDCESNAQIERLAEALS 100 (136)
T ss_dssp TEEEEEECCCHHHHHHHHHHHH
T ss_pred ceEEEEEcCCHHHHHHHHHHHH
Confidence 3478999999999999999987
No 127
>1hyw_A GPW, head-TO-tail joining protein W; novel fold, two helices, one two-stranded beta-sheet, viral protein; NMR {Enterobacteria phage lambda} SCOP: d.186.1.1 PDB: 2l6q_A 2l6r_A
Probab=22.38 E-value=1.1e+02 Score=17.41 Aligned_cols=32 Identities=13% Similarity=0.222 Sum_probs=26.0
Q ss_pred EEEeeCCceEEEEEcCCHHHHHHHHHHHHHhhh
Q psy4640 70 FKAEHANMRTYYFAADTRESMIQWMNALSLASI 102 (109)
Q Consensus 70 F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a~~ 102 (109)
-.+.. +.|+..|...|..++..+|+-|....-
T Consensus 24 vsV~y-dgr~V~Y~~asi~~L~~~I~~le~~Lg 55 (68)
T 1hyw_A 24 ATVQK-DGRRVEFTATSVSDLKKYIAELEVQTG 55 (68)
T ss_dssp EEEEC-SSCEEEECTTTHHHHHHHHHHHHHHTT
T ss_pred EEEEE-CCEEEEEecCCHHHHHHHHHHHHHHhc
Confidence 34443 468999999999999999999988663
No 128
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=21.54 E-value=54 Score=16.54 Aligned_cols=15 Identities=40% Similarity=0.771 Sum_probs=11.3
Q ss_pred eCCceEEEEEcCCHH
Q psy4640 74 HANMRTYYFAADTRE 88 (109)
Q Consensus 74 ~~~~r~y~fsA~s~~ 88 (109)
.++.+.||+.+.+.+
T Consensus 17 ~~~G~~YYyN~~T~e 31 (40)
T 2ysi_A 17 TPDGKVYYYNARTRE 31 (40)
T ss_dssp CTTSCEEEEETTTCC
T ss_pred CCCCCEEEEECCCCC
Confidence 567799999887653
No 129
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=21.28 E-value=1.1e+02 Score=17.59 Aligned_cols=24 Identities=13% Similarity=0.140 Sum_probs=20.4
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 78 RTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 78 r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
..+.|.+++.++.+.+.+.|..+-
T Consensus 73 ~hi~~~v~d~~~v~~~~~~l~~~G 96 (127)
T 3e5d_A 73 AHIAISTGTKEAVDELTEKLRQDG 96 (127)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHTT
T ss_pred EEEEEEcCCHHHHHHHHHHHHHcC
Confidence 568999999999999999988653
No 130
>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2
Probab=20.60 E-value=1.1e+02 Score=17.22 Aligned_cols=25 Identities=12% Similarity=0.044 Sum_probs=20.8
Q ss_pred ceEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 77 MRTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 77 ~r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
...+.|.++|.++.+.+.+.|..+-
T Consensus 61 ~~~~~~~v~~~~d~~~~~~~l~~~G 85 (113)
T 1xqa_A 61 TFHVGFPQESEEQVDKINQRLKEDG 85 (113)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHHTT
T ss_pred eeEEEEEcCCHHHHHHHHHHHHHCC
Confidence 3468899999999999999987653
No 131
>2wzo_A Transforming growth factor beta regulator 1; nucleus, cell cycle, tumor suppressor; 1.60A {Homo sapiens}
Probab=20.38 E-value=1.2e+02 Score=19.56 Aligned_cols=32 Identities=6% Similarity=0.038 Sum_probs=20.4
Q ss_pred eeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHh
Q psy4640 67 KFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 100 (109)
Q Consensus 67 ~~~F~i~~~~~r~y~fsA~s~~e~~~Wi~aI~~a 100 (109)
.+.|+|...+.....|.+.|.++. |-+.|+..
T Consensus 66 ~P~F~V~~e~~~~~~~~g~Sp~~~--W~~il~~i 97 (146)
T 2wzo_A 66 QPQFEIVPEDDPQNAIVSSSADAC--HAELLRTI 97 (146)
T ss_dssp SEEEEEEETTCGGGCEEESSHHHH--HHHHHHHH
T ss_pred cceeEEEecCCCCceEEeCChHHH--HHHHHHHH
Confidence 578999755433345668887754 66666654
No 132
>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}
Probab=20.25 E-value=1.4e+02 Score=18.23 Aligned_cols=26 Identities=4% Similarity=0.012 Sum_probs=21.6
Q ss_pred CceEEEEEcCCHHHHHHHHHHHHHhh
Q psy4640 76 NMRTYYFAADTRESMIQWMNALSLAS 101 (109)
Q Consensus 76 ~~r~y~fsA~s~~e~~~Wi~aI~~a~ 101 (109)
+...+.|.+++.+|++.|.+.|..+-
T Consensus 86 ~~~hl~f~v~d~~dv~~~~~~l~~~G 111 (144)
T 2kjz_A 86 GGGELAFRVENDAQVDETFAGWKASG 111 (144)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred CceEEEEEeCCHHHHHHHHHHHHHCC
Confidence 34568999999999999999998753
Done!