RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4640
(109 letters)
>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding
protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 54.9 bits (131), Expect = 7e-12
Identities = 32/62 (51%), Positives = 38/62 (61%)
Query: 40 EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 99
EE +LGS+LLPSY I P R+F+F AEH MRTY AADT E + W+ AL
Sbjct: 45 REESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGR 104
Query: 100 AS 101
AS
Sbjct: 105 AS 106
>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 48.8 bits (115), Expect = 2e-09
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 45 LGSILLPSYKISPCSSDDKV---FRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 101
LG+I L ++ S+ + F+ A+ Y+ A T + +W+ A+ +AS
Sbjct: 44 LGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS 103
>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing
protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 99
Score = 46.1 bits (108), Expect = 2e-08
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 37 DRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNA 96
++ +L +I LPS K+S ++++ +K + A ++Y +A + E QW+
Sbjct: 35 GGSQDGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAKQ-SWYLSASSAELQQQWLET 93
Query: 97 LSLAS 101
LS A+
Sbjct: 94 LSTAA 98
>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 209
Score = 47.2 bits (111), Expect = 3e-08
Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Query: 29 SRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVF-RKFSFKAEHANMRTYYFAADTR 87
S+ ++++ G + Y + ++ K + F+ + R Y F A +
Sbjct: 132 SKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASP 191
Query: 88 ESMIQWMNALSLA 100
+ +W+ L
Sbjct: 192 KDAEEWVQQLKFI 204
>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 122
Score = 44.5 bits (104), Expect = 1e-07
Identities = 11/79 (13%), Positives = 22/79 (27%), Gaps = 6/79 (7%)
Query: 29 SRNGLAVTDRFEEEKLLGSILLPSYKISPCS------SDDKVFRKFSFKAEHANMRTYYF 82
++ + K + + D +K + + AN +
Sbjct: 40 KAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKKHVLRVKLANGALFLL 99
Query: 83 AADTRESMIQWMNALSLAS 101
A M QW+ +L S
Sbjct: 100 QAHDDTEMSQWVTSLKAQS 118
>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 116
Score = 44.1 bits (103), Expect = 2e-07
Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 6/71 (8%)
Query: 37 DRFEEEKLLGSILLPSYKISPCSSDDKVF------RKFSFKAEHANMRTYYFAADTRESM 90
EE + +G L +S + + FK + YY A ++
Sbjct: 46 PSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAER 105
Query: 91 IQWMNALSLAS 101
+W+ A+ +
Sbjct: 106 AEWIEAIKKLT 116
>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 43.2 bits (101), Expect = 2e-07
Identities = 17/76 (22%), Positives = 28/76 (36%)
Query: 29 SRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRE 88
N + E++ L I L + + + RT+Y AD+ E
Sbjct: 27 DENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPE 86
Query: 89 SMIQWMNALSLASILQ 104
M W+ A+S A + Q
Sbjct: 87 EMHSWIKAVSGAIVAQ 102
>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein
APS {Mouse (Mus musculus) [TaxId: 10090]}
Length = 136
Score = 43.3 bits (101), Expect = 3e-07
Identities = 9/71 (12%), Positives = 20/71 (28%), Gaps = 2/71 (2%)
Query: 40 EEEKLLGSILLPSYKISPC-SSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALS 98
+ + SI L + + + +F + N Y W+ +
Sbjct: 67 KASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQ 126
Query: 99 LASILQNSSTG 109
+ S+G
Sbjct: 127 GC-VDSGPSSG 136
>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId:
9606]}
Length = 113
Score = 43.0 bits (100), Expect = 4e-07
Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Query: 31 NGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESM 90
+G+ + + G I L ++ D R F FK + ++F A E
Sbjct: 31 DGIEFYKKKSDNSPKGMIPLKGSTLT-SPCQDFGKRMFVFKITTTKQQDHFFQAAFLEER 89
Query: 91 IQWMNALSLA 100
W+ ++ A
Sbjct: 90 DAWVRDINKA 99
>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 43.0 bits (100), Expect = 4e-07
Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 8/88 (9%)
Query: 29 SRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFK-------AEHANMRTYY 81
L E+ K G + LP I +++ + KF F+ +Y
Sbjct: 32 RAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYV 91
Query: 82 FAADTRESMIQWMNALSLASILQNSSTG 109
A ++ M +W+ L S+G
Sbjct: 92 LMASSQAEMEEWVKFLRRV-AGSGPSSG 118
>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain
[TaxId: 10090]}
Length = 106
Score = 42.8 bits (99), Expect = 5e-07
Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 44 LLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 100
+ L K +K FK ++ Y F A E M W+ A+S A
Sbjct: 52 SEVPVSLKEAICEVALDYKK--KKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106
>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 111
Score = 42.6 bits (99), Expect = 5e-07
Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 30 RNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRK-FSFKAEHANMRTYYFAADTRE 88
+ ++++ G + Y + ++ K +K F+ + R Y F A + +
Sbjct: 38 KTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPK 97
Query: 89 SMIQWMNALSLA 100
+W+ L
Sbjct: 98 DAEEWVQQLKFI 109
>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]}
Length = 111
Score = 40.7 bits (94), Expect = 3e-06
Identities = 8/53 (15%), Positives = 15/53 (28%), Gaps = 7/53 (13%)
Query: 58 CSSDDKVFRKFSFKAEHANM-------RTYYFAADTRESMIQWMNALSLASIL 103
+ K F + R A +T+E + W + A +
Sbjct: 57 DVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRAGVY 109
>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8
(ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 40.7 bits (94), Expect = 3e-06
Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 27/102 (26%)
Query: 31 NGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN-------------- 76
L + + + +G++LL + +I S F FK H
Sbjct: 33 GVLLIYKTQKNGQWVGTVLLNACEIIERPSKK---DGFCFKLFHPLEQSIWAVKGPKGEA 89
Query: 77 ---------MRTYYFAADTRESMIQWMNALSLASILQNSSTG 109
A + WM+AL LA + S+G
Sbjct: 90 VGSITQPLPSSYLIIRATSESDGRCWMDALELA-LKSGPSSG 130
>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 127
Score = 40.3 bits (93), Expect = 4e-06
Identities = 16/96 (16%), Positives = 31/96 (32%), Gaps = 19/96 (19%)
Query: 29 SRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVF------------------RKFSF 70
+ N L + +++ G I L + I K +
Sbjct: 29 TDNCLYYFEYTTDKEPRGIIPLENLSIREVLDPRKPNCFELYNPSHKGQVIKACKTEADG 88
Query: 71 KAEHANMRTYYFAADTRESMIQWMNALSLASILQNS 106
+ N Y +A + E +WM ++ ASI ++
Sbjct: 89 RVVEGNHVVYRISAPSPEEKEEWMKSIK-ASISRDP 123
>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and
3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 39.7 bits (92), Expect = 5e-06
Identities = 12/51 (23%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Query: 50 LPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 100
L + S D R F RT+Y A T +W+ L
Sbjct: 47 LDLTECSAVQFDYSQERVNCFCLVFPF-RTFYLCAKTGVEADEWIKILRWK 96
>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 39.6 bits (91), Expect = 6e-06
Identities = 13/53 (24%), Positives = 17/53 (32%), Gaps = 3/53 (5%)
Query: 46 GSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALS 98
SI L S +D K K + + AAD+ W AL
Sbjct: 51 RSIPLESCFNINKRADSK--NKHLVA-LYTRDEHFAIAADSEAEQDSWYQALL 100
>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 117
Score = 39.6 bits (91), Expect = 8e-06
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 5/86 (5%)
Query: 28 GSRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRK----FSFKAEHANMRTYYFA 83
+++ L D + + G I L + + K +F R Y F
Sbjct: 33 KTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTRRVYNFC 92
Query: 84 ADTRESMIQWMNALSLASILQNSSTG 109
A S QW++ + + + S+G
Sbjct: 93 AQDVPSAQQWVDRIQ-SCLSSGPSSG 117
>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein
SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 38.7 bits (89), Expect = 2e-05
Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 29 SRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKF-SFKAEHANMRTYYFAADTR 87
SR + ++ G+ L+ Y + + +K F+ + RTY F A +
Sbjct: 29 SRGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRRTYEFTATSP 88
Query: 88 ESMIQWMNALSLA 100
W++ +S
Sbjct: 89 AEARDWVDQISFL 101
>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for
secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]}
Length = 126
Score = 38.8 bits (89), Expect = 2e-05
Identities = 12/66 (18%), Positives = 25/66 (37%)
Query: 36 TDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMN 95
+ R ++ + + L Y + + +F T FA+D + I W+
Sbjct: 44 SYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQ 103
Query: 96 ALSLAS 101
A+ A+
Sbjct: 104 AMYRAT 109
>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 126
Score = 38.1 bits (87), Expect = 3e-05
Identities = 11/57 (19%), Positives = 26/57 (45%)
Query: 45 LGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 101
+GS+ L ++ + + +A + Y+ A+ ++ + W+ AL+ AS
Sbjct: 63 VGSLQLTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQAS 119
>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2
isoform [TaxId: 9606]}
Length = 123
Score = 37.7 bits (86), Expect = 4e-05
Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Query: 36 TDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMN 95
G + + + + D RK FK + + Y F A M W+
Sbjct: 51 KAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLR 110
Query: 96 ALSLASILQNSSTG 109
++ A I S+G
Sbjct: 111 VVNAA-IASGPSSG 123
>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21
{Human (Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 37.3 bits (85), Expect = 6e-05
Identities = 14/68 (20%), Positives = 24/68 (35%), Gaps = 3/68 (4%)
Query: 42 EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 101
+ I + + I S+ K F F A+ R+ M+ W+ + +S
Sbjct: 52 SEEEQPISVNACLIDISYSETKRKNVFRLTTSD---CECLFQAEDRDDMLAWIKTIQESS 108
Query: 102 ILQNSSTG 109
L TG
Sbjct: 109 NLNEEDTG 116
>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase
C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 101
Score = 36.9 bits (84), Expect = 6e-05
Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Query: 39 FEEEKLLGSILLPSYKISPCSSDDKVFRK-FSFKAEHANMRTYYFAADTRESMIQWMNAL 97
+ L G + +P+ +I+ FS + AAD++E + W+ +
Sbjct: 35 TSSDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKI 94
Query: 98 SLAS 101
+
Sbjct: 95 REVA 98
>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha,
APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 36.5 bits (83), Expect = 1e-04
Identities = 6/72 (8%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 30 RNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRES 89
+ G ++ + ++ + + + +D+ R ++ A++++
Sbjct: 32 QGGNLMSQARGDVAGGLAMDIDNCSVMAVDCEDR--RYCFQITSFDGKKSSILQAESKKD 89
Query: 90 MIQWMNALSLAS 101
+W+ ++ S
Sbjct: 90 HEEWICTINNIS 101
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 169
Score = 37.2 bits (85), Expect = 1e-04
Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 66 RKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASILQNSS 107
+ F+ + Y + T E +W++ L I NS
Sbjct: 97 FPYPFQVVYDE-GPLYVFSPTEELRKRWIHQLK-NVIRYNSD 136
>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 35.7 bits (81), Expect = 2e-04
Identities = 8/65 (12%), Positives = 18/65 (27%), Gaps = 4/65 (6%)
Query: 41 EEKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANM---RTYYFAADTRESMIQWMNA 96
++ L ++ + R +F F +T E +W A
Sbjct: 44 QDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTA 103
Query: 97 LSLAS 101
+ +
Sbjct: 104 IQTVA 108
>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein
6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 109
Score = 34.7 bits (78), Expect = 4e-04
Identities = 14/57 (24%), Positives = 22/57 (38%)
Query: 51 PSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASILQNSS 107
P + D+ F+ H M Y F AD S +W++A ++ SS
Sbjct: 52 PLLGFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTVSGPSS 108
>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9
{Human (Homo sapiens) [TaxId: 9606]}
Length = 150
Score = 34.7 bits (78), Expect = 8e-04
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 40 EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 99
++ GSI L S ++ R+F+F+ + + +Y AAD+ M +W+ L+
Sbjct: 65 ISKEPKGSIFLDSCMGVVQNNKV---RRFAFELKMQDKSSYLLAADSEVEMEEWITILNK 121
Query: 100 AS 101
Sbjct: 122 IL 123
>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 33.3 bits (75), Expect = 0.001
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 74 HANMRTYYFAADTRESMIQWMNALSLASILQNSST 108
RT+ F + E W++ L A Q+ ++
Sbjct: 64 VTTQRTFVFRVEKEEERNDWISILLNALKSQSLTS 98
>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId:
9606]}
Length = 95
Score = 32.6 bits (73), Expect = 0.002
Identities = 13/65 (20%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Query: 37 DRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNA 96
DR + + L ++ P S D ++ H A + E M W+
Sbjct: 32 DRNRSKVAQQPLSLVGCEVVPDPSPDHLYSFRIL---HKGEELAKLEAKSSEEMGHWLGL 88
Query: 97 LSLAS 101
L S
Sbjct: 89 LLSES 93
>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2
(beta-adrenergic receptor kinase 1) {Cow (Bos taurus)
[TaxId: 9913]}
Length = 119
Score = 31.2 bits (69), Expect = 0.010
Identities = 5/43 (11%), Positives = 15/43 (34%)
Query: 58 CSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 100
+ ++ + + + + D+ ++QW L A
Sbjct: 59 SVEETQIKERKCLLLKIRGGKQFVLQCDSDPELVQWKKELRDA 101
>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1,
STAP-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 136
Score = 30.7 bits (68), Expect = 0.017
Identities = 3/24 (12%), Positives = 6/24 (25%)
Query: 74 HANMRTYYFAADTRESMIQWMNAL 97
+ ES +W +
Sbjct: 78 VLPKEEVQLKTENTESGEEWRGFI 101
>d2rm0w1 b.72.1.1 (W:1-37) Formin binding protein FBP28 domain
{Domestic mouse (Mus musculus) [TaxId: 10090]}
Length = 37
Score = 24.7 bits (54), Expect = 0.72
Identities = 7/16 (43%), Positives = 9/16 (56%), Gaps = 2/16 (12%)
Query: 78 RTYYFAADTRESMIQW 93
+TYY+ T ES W
Sbjct: 17 KTYYYNNRTLES--TW 30
>d1o6wa2 b.72.1.1 (A:30-75) Splicing factor prp40 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 46
Score = 24.8 bits (54), Expect = 0.72
Identities = 6/16 (37%), Positives = 9/16 (56%), Gaps = 2/16 (12%)
Query: 78 RTYYFAADTRESMIQW 93
+ YY+ TRE+ W
Sbjct: 25 KVYYYNPTTRET--SW 38
>d1o6wa1 b.72.1.1 (A:1-29) Splicing factor prp40 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 29
Score = 23.9 bits (52), Expect = 1.0
Identities = 6/16 (37%), Positives = 9/16 (56%), Gaps = 2/16 (12%)
Query: 78 RTYYFAADTRESMIQW 93
R YY+ T++S W
Sbjct: 13 RIYYYNTLTKKS--TW 26
>d1ywia1 b.72.1.1 (A:15-42) Huntingtin-interacting protein
HYPA/FBP11 {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.9 bits (52), Expect = 1.0
Identities = 7/16 (43%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
Query: 78 RTYYFAADTRESMIQW 93
RTYY+ +T++S W
Sbjct: 12 RTYYYNTETKQS--TW 25
>d2dk1a1 b.72.1.1 (A:7-44) WW domain-binding protein 4, WBP4
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 23.6 bits (51), Expect = 1.8
Identities = 5/16 (31%), Positives = 7/16 (43%), Gaps = 2/16 (12%)
Query: 78 RTYYFAADTRESMIQW 93
YY+ + S QW
Sbjct: 12 YHYYYDLISGAS--QW 25
>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor
9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 162
Score = 24.7 bits (53), Expect = 2.2
Identities = 6/23 (26%), Positives = 9/23 (39%)
Query: 78 RTYYFAADTRESMIQWMNALSLA 100
+ F A E I+W+ A
Sbjct: 109 EVHLFFAKKLEEKIRWLRAFREE 131
>d1ddma_ b.55.1.2 (A:) Numb {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 135
Score = 24.2 bits (52), Expect = 3.3
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 29 SRNGLAVTDRFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYY 81
S +GL V D + ++ K+S C+ D R FS+ R +
Sbjct: 58 SGDGLRVVDDETKGLIV---DQTIEKVSFCAPDRNHERGFSYICRDGTTRRWM 107
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.127 0.356
Gapped
Lambda K H
0.267 0.0661 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 362,171
Number of extensions: 14234
Number of successful extensions: 62
Number of sequences better than 10.0: 1
Number of HSP's gapped: 61
Number of HSP's successfully gapped: 42
Length of query: 109
Length of database: 2,407,596
Length adjustment: 68
Effective length of query: 41
Effective length of database: 1,473,956
Effective search space: 60432196
Effective search space used: 60432196
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.0 bits)