BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4641
(229 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0AFU9|RISA_SHIFL Riboflavin synthase OS=Shigella flexneri GN=ribE PE=3 SV=1
Length = 213
Score = 216 bits (551), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 146/207 (70%), Gaps = 2/207 (0%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTGIVQG K+ ++ +F++ + P +LDG+ SVA NG CL+VT+I GN++S
Sbjct: 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVS 60
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
FD++ ETL+ITNL + V +VN+ER+AK + E+GGH +SGHI+ A V I E N +
Sbjct: 61 FDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQ 120
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+ ++ + LMKY+ YKG++ IDGISLT+G+V F VHLIPET+E+TT+ KK +G +
Sbjct: 121 IWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARV 180
Query: 181 NIEVDSQTQVIVNTVERVL--KENYGN 205
NIE+D QTQ +V+TVERVL +EN N
Sbjct: 181 NIEIDPQTQAVVDTVERVLAARENAMN 207
>sp|P0AFU8|RISA_ECOLI Riboflavin synthase OS=Escherichia coli (strain K12) GN=ribC PE=1
SV=1
Length = 213
Score = 216 bits (551), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 146/207 (70%), Gaps = 2/207 (0%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTGIVQG K+ ++ +F++ + P +LDG+ SVA NG CL+VT+I GN++S
Sbjct: 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVS 60
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
FD++ ETL+ITNL + V +VN+ER+AK + E+GGH +SGHI+ A V I E N +
Sbjct: 61 FDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQ 120
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+ ++ + LMKY+ YKG++ IDGISLT+G+V F VHLIPET+E+TT+ KK +G +
Sbjct: 121 IWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARV 180
Query: 181 NIEVDSQTQVIVNTVERVL--KENYGN 205
NIE+D QTQ +V+TVERVL +EN N
Sbjct: 181 NIEIDPQTQAVVDTVERVLAARENAMN 207
>sp|P45273|RISA_HAEIN Riboflavin synthase OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=ribE PE=3 SV=1
Length = 204
Score = 198 bits (503), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 139/200 (69%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTGIVQG + ++ +F++ + ++ + I S+A NGVCL+VT+I G+ +S
Sbjct: 1 MFTGIVQGTAPIHSIKEKANFRTQVVKLLPEMRKDLEIGASIANNGVCLTVTEINGDLVS 60
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
FD++ ETLKITNL V V +VN+ER+ +M TE+GGH LSGHI A + I A E N +
Sbjct: 61 FDLMQETLKITNLGTVKVGDYVNIERAMQMGTEIGGHLLSGHIYCTAKISDIIASENNRQ 120
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+ ++ + +MKY+ KG+VA+DGISLTIG+V + F V+LIPET+++T M ++ VGD +
Sbjct: 121 IWFELPSADVMKYILTKGFVAVDGISLTIGEVRDTQFCVNLIPETLQRTLMGRRKVGDIV 180
Query: 181 NIEVDSQTQVIVNTVERVLK 200
NIE+D QTQ IV+TVE L+
Sbjct: 181 NIEIDPQTQAIVDTVENYLQ 200
>sp|Q8KA22|RISA_BUCAP Riboflavin synthase OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=ribE PE=3 SV=1
Length = 208
Score = 178 bits (452), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 136/206 (66%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTGIV GI +V ++ +F + T+ F S LL + I SVA NG CL+V I ++
Sbjct: 1 MFTGIVNGIARVVSINKKKNFHTYTVNFSSILLKNLKIGDSVAHNGCCLTVKYINCPHVV 60
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
FD++ T+ TNL + + +VN+ERS K E+GGH +SGHI++ + I L+KNY
Sbjct: 61 FDIMKITIANTNLGVLNIGDYVNIERSLKYGDEMGGHIISGHIMNTGEISKISKLDKNYI 120
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+ ++ + SLMKY+FYKG++AIDGISLTI + ++ F V +IPET+ TT+ K +G +
Sbjct: 121 LWCKVKDLSLMKYIFYKGFIAIDGISLTINNIIKNEFCVSIIPETLSSTTIGFKKIGQLV 180
Query: 181 NIEVDSQTQVIVNTVERVLKENYGNL 206
NIE+D TQ+IV+T +R++K++ L
Sbjct: 181 NIEIDFYTQIIVDTTKRLIKKDISTL 206
>sp|Q89AX1|RISA_BUCBP Riboflavin synthase OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=ribE PE=3 SV=1
Length = 212
Score = 169 bits (427), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 125/200 (62%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTGIV+G+GKV + + ++L+ + + S++ NG CL+V I
Sbjct: 1 MFTGIVRGLGKVVKILKEKKISQWEVETSNELVKNLMLGASISCNGCCLTVRNIFRTIFC 60
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
D++ ETL+ T+L + V Q++NLERS K EVGGH +SGHII V + L N
Sbjct: 61 VDIVEETLRSTSLNTIIVGQYINLERSIKFGEEVGGHLVSGHIITTGVVSDKKELFSNQE 120
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+ I ++ +KY FYKG+V +DGISLTIG + + F V LIPET+ +TT+ +K +GD +
Sbjct: 121 LWISLSASFFIKYFFYKGFVCVDGISLTIGSIKNNAFCVFLIPETILRTTIGQKIIGDVV 180
Query: 181 NIEVDSQTQVIVNTVERVLK 200
NIE+D TQ+ V++VER+LK
Sbjct: 181 NIEIDFYTQITVDSVERLLK 200
>sp|P57212|RISA_BUCAI Riboflavin synthase OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=ribE PE=3 SV=1
Length = 208
Score = 157 bits (397), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 125/206 (60%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTGI+ G + + T+ PS+L + + S++ NG CL+V I ++I
Sbjct: 1 MFTGIINGTATIVYIEKKKKKYRYTVELPSNLSKNLKLGDSISHNGCCLTVKLINNSFII 60
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
DVI ETLK TNL + + +N+ERS K E+GGH +SGH+++ A + + + N
Sbjct: 61 CDVIQETLKSTNLGILNIGDSINIERSIKYGDEIGGHIISGHVMNTAEISKMSKSDNNCV 120
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+ ++M N SLMKY+FYKG++ +DGISLT+ + ++ F V++IP T TT+ K G +
Sbjct: 121 IWLKMNNMSLMKYIFYKGFICVDGISLTVNDIIKNEFCVNIIPYTFLFTTIKDKKNGSLV 180
Query: 181 NIEVDSQTQVIVNTVERVLKENYGNL 206
NIE+D TQ IV+T ER++ N +L
Sbjct: 181 NIEIDFYTQTIVDTTERLINNNLKSL 206
>sp|Q9PJZ1|RISA_CHLMU Riboflavin synthase OS=Chlamydia muridarum (strain MoPn / Nigg)
GN=ribE PE=3 SV=1
Length = 198
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 126/206 (61%), Gaps = 9/206 (4%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIW-FPSDLLDGISISCSVAINGVCLSVTKIEGNYI 59
MF+GI+Q + +V + Y D SM I F +L+DG+ S S+A++G+CL++ K E +
Sbjct: 1 MFSGIIQEVARVDLIHHYGD--SMEIGIFARNLVDGVPGS-SIAVDGICLTLVKREFELL 57
Query: 60 SFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNY 119
FDV ET+ T +K V VNLERS ++ E+GGHF+SGH V V I A+EK+Y
Sbjct: 58 FFDVTEETMACTTIKNYTVGSMVNLERSVRLGDEIGGHFVSGH---VCGVGTIIAVEKSY 114
Query: 120 RMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDA 179
TN L+ YV KG++AIDGISLTI +V D F V +IPET +T++ K VG
Sbjct: 115 MFFKAPTN--LVPYVLEKGFIAIDGISLTIAQVRGDIFSVSVIPETRARTSLGYKQVGSH 172
Query: 180 LNIEVDSQTQVIVNTVERVLKENYGN 205
+N+E D T++ V+TV R E G
Sbjct: 173 VNMEPDMMTKMQVDTVMRFQAEKIGK 198
>sp|Q9Z820|RISA_CHLPN Riboflavin synthase OS=Chlamydia pneumoniae GN=ribE PE=3 SV=1
Length = 200
Score = 142 bits (357), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 119/199 (59%), Gaps = 5/199 (2%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MF+GI+Q +G+V + + S+ I + + SVA++GVCL++T + I
Sbjct: 1 MFSGIIQELGEVCFFEAQGNGLSLGIKSTPLFVTPLVTGDSVAVDGVCLTLTSCNESKIF 60
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
FDVI ETL T L VNLE + KM +GGH LSGH+ A + I+ +R
Sbjct: 61 FDVIPETLACTTLGEKRCSDQVNLEAALKMGDSIGGHLLSGHVFGTAEIFLIKENRYYFR 120
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+K L +Y+F KG++AIDGISLT+ V D F V LIPET+++TT+ KK G+ +
Sbjct: 121 -----GSKELSQYLFEKGFIAIDGISLTLVSVDSDTFSVGLIPETLQRTTLGKKREGERV 175
Query: 181 NIEVDSQTQVIVNTVERVL 199
NIE+D T++ V+TV+R+L
Sbjct: 176 NIEIDMSTKIQVDTVKRIL 194
>sp|O84410|RISA_CHLTR Riboflavin synthase OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=ribE PE=3 SV=1
Length = 199
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 120/203 (59%), Gaps = 9/203 (4%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIW-FPSDLLDGISISCSVAINGVCLSVTKIEGNYI 59
MF+GI+Q + +V + D SM I F L+D + S S +++G+CL++ K + +
Sbjct: 1 MFSGIIQEVARVDLIHHLRD--SMEIGVFARKLIDVVPGS-SFSVDGICLTLVKRQYELL 57
Query: 60 SFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNY 119
FDV ET+ T +K V VNLERS ++ E+GGHF+SGH V + I A+EK+Y
Sbjct: 58 FFDVTEETMAWTTIKDYTVGTMVNLERSVRLGDEIGGHFVSGH---VCGIGTIIAIEKSY 114
Query: 120 RMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDA 179
N L+ Y+ KG++AIDGISLTI +V D F V LIPET +T++ K VG
Sbjct: 115 MFFKAPAN--LVPYILEKGFIAIDGISLTIARVKGDIFSVSLIPETRARTSLGYKQVGAH 172
Query: 180 LNIEVDSQTQVIVNTVERVLKEN 202
+N+E D T++ V+T+ R E
Sbjct: 173 VNMEPDMMTKMQVDTIMRFHAEK 195
>sp|O67604|RISA_AQUAE Riboflavin synthase OS=Aquifex aeolicus (strain VF5) GN=ribE PE=3
SV=1
Length = 207
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 122/201 (60%), Gaps = 4/201 (1%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTG+V+ +GKV + + +++ L+ + + SV++NG CL+V I+ + ++
Sbjct: 1 MFTGLVEDLGKVKNLTLSSKGAKLSV---ETKLEDVKLGDSVSVNGACLTVVDIKSSTLT 57
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
FDV ETLK TNL + +VNLER+ ++ +GGH + GH+ A V++ L ++Y
Sbjct: 58 FDVSPETLKRTNLGKLKTGDYVNLERALRVGERLGGHIVQGHVDFTAPVKSFNFLGEHYE 117
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+ I++ + + YV KG +A+DGISLT+ V E+ ++++IP T + T + K VGD L
Sbjct: 118 LVIEIPEEWSI-YVVEKGSIALDGISLTVNYVKENKVFINIIPHTYKSTNLQFKKVGDLL 176
Query: 181 NIEVDSQTQVIVNTVERVLKE 201
N+E D + ++N + ++ K+
Sbjct: 177 NVETDILGKYVINYLNKLKKK 197
>sp|P50854|RISA_ACTPL Riboflavin synthase OS=Actinobacillus pleuropneumoniae GN=ribE PE=3
SV=1
Length = 215
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 111/187 (59%), Gaps = 6/187 (3%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTGI++ +GK++ + +F +TI + +L + + ++A+NGVCL+VT N +
Sbjct: 1 MFTGIIEEVGKIAQIHKQGEFAVVTI-NATKVLQDVHLGDTIAVNGVCLTVTSFSSNQFT 59
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKN-- 118
DV++ETLK T+L + + VNLER+ N GGH +SGHI + I +
Sbjct: 60 ADVMSETLKRTSLGELKSNSPVNLERAMAANGRFGGHIVSGHIDGTGEIAEITPAHNSTW 119
Query: 119 YRMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGD 178
YR++ T+ LM+Y+ KG + IDGISLT+ ++ F V +IP T+++T + K +G
Sbjct: 120 YRIK---TSPKLMRYIIEKGSITIDGISLTVVDTDDESFRVSIIPHTIKETNLGSKKIGS 176
Query: 179 ALNIEVD 185
+N+E D
Sbjct: 177 IVNLEND 183
>sp|Q9Y7P0|RISA_SCHPO Riboflavin synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=rib5 PE=1 SV=1
Length = 208
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 106/187 (56%), Gaps = 4/187 (2%)
Query: 1 MFTGIVQGIGKVSAVFSY--NDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNY 58
MFTG+V+ IG V V N F +M I P +LD S+A+NG CL+VT + +
Sbjct: 1 MFTGLVEAIGVVKDVQGTIDNGF-AMKIEAPQ-ILDDCHTGDSIAVNGTCLTVTDFDRYH 58
Query: 59 ISFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKN 118
+ + E+L++TNL VNLER+ +T +GGHF+ GH+ VA + + +
Sbjct: 59 FTVGIAPESLRLTNLGQCKAGDPVNLERAVLSSTRMGGHFVQGHVDTVAEIVEKKQDGEA 118
Query: 119 YRMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGD 178
+ + ++KY+ YKGY+A+DG SLTI V + F + +I T K M+KK VGD
Sbjct: 119 IDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHVDDSTFSIMMISYTQSKVIMAKKNVGD 178
Query: 179 ALNIEVD 185
+N+EVD
Sbjct: 179 LVNVEVD 185
>sp|P16440|RISA_BACSU Riboflavin synthase OS=Bacillus subtilis (strain 168) GN=ribE PE=1
SV=2
Length = 215
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTGI++ G + ++ ++TI S +L+ + + S+A+NG+CL+VT N +
Sbjct: 1 MFTGIIEETGTIESMKKAGHAMALTIKC-SKILEDVHLGDSIAVNGICLTVTDFTKNQFT 59
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
DV+ ET+K T+L + VNLER+ N GGHF+SGH+ A + I+
Sbjct: 60 VDVMPETVKATSLNDLTKGSKVNLERAMAANGRFGGHFVSGHVDGTAEITRIEEKSNAVY 119
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+++M + SL K + KG + +DG+SLTI + ED + LIP T+ +T S+K +G +
Sbjct: 120 YDLKM-DPSLTKTLVLKGSITVDGVSLTIFGLTEDTVTISLIPHTISETIFSEKTIGSKV 178
Query: 181 NIEVD 185
NIE D
Sbjct: 179 NIECD 183
>sp|P65327|RISA_MYCTU Riboflavin synthase OS=Mycobacterium tuberculosis GN=ribE PE=3 SV=1
Length = 201
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 114/205 (55%), Gaps = 12/205 (5%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKI--EGNY 58
MFTGIV+ G+V+ + D +TI P D S+A+NGVCL+V + +G +
Sbjct: 1 MFTGIVEERGEVTGREALVDAARLTIRGPMVTADA-GHGDSIAVNGVCLTVVDVLPDGQF 59
Query: 59 ISFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKN 118
+ DV+ ETL +NL + VNLER+A + + +GGH + GH+ + A E
Sbjct: 60 TA-DVMAETLNRSNLGELRPGSRVNLERAAALGSRLGGHIVQGHVDATGEIVARCPSEHW 118
Query: 119 YRMEIQMTNKSLMKYVFYKGYVAIDGISLTI---GKVFEDYFYVHLIPETMEKTTMSKKA 175
+ I+M S+ +YV KG + +DGISLT+ G D+F V LIP T E TT+ A
Sbjct: 119 EVVRIEMP-ASVARYVVEKGSITVDGISLTVSGLGAEQRDWFEVSLIPTTRELTTLGSAA 177
Query: 176 VGDALNIEVDSQTQVIVNTVERVLK 200
VG +N+EVD V+ VER+++
Sbjct: 178 VGTRVNLEVD----VVAKYVERLMR 198
>sp|P65328|RISA_MYCBO Riboflavin synthase OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=ribE PE=3 SV=1
Length = 201
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 114/205 (55%), Gaps = 12/205 (5%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKI--EGNY 58
MFTGIV+ G+V+ + D +TI P D S+A+NGVCL+V + +G +
Sbjct: 1 MFTGIVEERGEVTGREALVDAARLTIRGPMVTADA-GHGDSIAVNGVCLTVVDVLPDGQF 59
Query: 59 ISFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKN 118
+ DV+ ETL +NL + VNLER+A + + +GGH + GH+ + A E
Sbjct: 60 TA-DVMAETLNRSNLGELRPGSRVNLERAAALGSRLGGHIVQGHVDATGEIVARCPSEHW 118
Query: 119 YRMEIQMTNKSLMKYVFYKGYVAIDGISLTI---GKVFEDYFYVHLIPETMEKTTMSKKA 175
+ I+M S+ +YV KG + +DGISLT+ G D+F V LIP T E TT+ A
Sbjct: 119 EVVRIEMP-ASVARYVVEKGSITVDGISLTVSGLGAEQRDWFEVSLIPTTRELTTLGSAA 177
Query: 176 VGDALNIEVDSQTQVIVNTVERVLK 200
VG +N+EVD V+ VER+++
Sbjct: 178 VGTRVNLEVD----VVAKYVERLMR 198
>sp|Q44680|RISA_BACAM Riboflavin synthase OS=Bacillus amyloliquefaciens GN=ribE PE=3 SV=1
Length = 215
Score = 110 bits (276), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTGIV+ G + A+ ++TI S + + + S+A+NG+CL+VT N +
Sbjct: 1 MFTGIVEETGTIQAIKKTGLSMALTIA-ASKVTSDVRLGDSIAVNGICLTVTGFSDNQFT 59
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
DV+ ET+K T+L ++ VNLER+ N GGHF+SGH+ A + I+
Sbjct: 60 VDVMPETVKATSLNGLSKGSKVNLERAMSANGRFGGHFVSGHVDGTAEITRIEKKSNAVY 119
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+++++ + L K + KG + +DG+S TI + ++ V +IP T+ +T KAVG +
Sbjct: 120 YDLKLSPE-LTKTLVLKGSITVDGVSSTIFGLSDESVTVSVIPHTISETIFRTKAVGSIV 178
Query: 181 NIEVD 185
NIE D
Sbjct: 179 NIECD 183
>sp|P51961|RISA_PHOPO Riboflavin synthase OS=Photobacterium phosphoreum GN=ribE PE=3 SV=1
Length = 218
Score = 110 bits (275), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 115/200 (57%), Gaps = 7/200 (3%)
Query: 1 MFTGIVQGIGKVSAVFSY-NDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYI 59
MFTGI++ +G +SA+ S +DF+ DL D + I S+A NG+CL+V K+ N
Sbjct: 1 MFTGIIEAVGNISAITSKGSDFEVSVNCDTLDLAD-VKIGDSIATNGICLTVVKLTANSY 59
Query: 60 SFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNY 119
D+ ETL T V Q VNLE++ T GGH +SGH+ VA V + +
Sbjct: 60 VADLSIETLSRTAFNYYKVGQAVNLEKAMLPTTRFGGHIVSGHVDAVAEVIECRTSGRAI 119
Query: 120 RMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDA 179
+ I++ ++ + KY+ KG V +DG+SLT+ V + F + ++P T+ +TT++ VG+
Sbjct: 120 DIWIRVPSQ-IEKYLSEKGSVTVDGVSLTVNAVTGNEFKLTIVPHTVVETTIADFKVGNK 178
Query: 180 LNIEVDSQTQVIVNTVERVL 199
+NIEVD V+ +ER+L
Sbjct: 179 VNIEVD----VLARYIERLL 194
>sp|P38145|RISA_YEAST Riboflavin synthase OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=RIB5 PE=1 SV=1
Length = 238
Score = 110 bits (275), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 10/201 (4%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKS------MTIWFPSDLLDGISISCSVAINGVCLSVTKI 54
MFTGIV+ +G V Y+D +S +TI +L + S+A+NGVCL+VT+
Sbjct: 1 MFTGIVECMGTVLENNPYDDSESGGQGVSITIGNAGSILTDCHVGDSIAVNGVCLTVTEF 60
Query: 55 EGNYISFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQA 114
+ + ET+K +N+ + VNLER+ + GGH++ GH+ VAN+ + +
Sbjct: 61 NNDSFKVGISPETIKRSNVASWIQGTQVNLERAVSQDVRFGGHYVQGHVDTVANIVSRRP 120
Query: 115 LEKNYRMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFE----DYFYVHLIPETMEKTT 170
+ Q+ ++ KY+ KG++ IDG SLTI KV FY+ +I T +
Sbjct: 121 EGNSIIFGFQLRDQEYFKYIVEKGFICIDGTSLTIIKVDPLSQGGAFYISMIKHTQDNVI 180
Query: 171 MSKKAVGDALNIEVDSQTQVI 191
M K +GD +NIEVD ++I
Sbjct: 181 MPLKKIGDEVNIEVDLTGKII 201
>sp|P21578|LUXY_VIBFI Yellow fluorescent protein OS=Vibrio fischeri GN=luxY PE=1 SV=1
Length = 194
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MF GIV+GIG + + Y D I FP ++L+GI S+ NG L+VT + N +
Sbjct: 1 MFKGIVEGIGIIEKIDIYTDLDKYAIRFPENMLNGIKKESSIMFNGCFLTVTSVNSNIVW 60
Query: 61 FDVI-NETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNY 119
FD+ E K+ + V VNL K GGH LS I VA++ I E
Sbjct: 61 FDIFEKEARKLDTFREYKVGDRVNLGTFPKFGAASGGHILSARISCVASIIEIIENEDYQ 120
Query: 120 RMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDA 179
+M IQ+ ++ +++ K Y+A+DGISLTI + + F++ L + + T M + GD
Sbjct: 121 QMWIQIP-ENFTEFLIDKDYIAVDGISLTIDTIKNNQFFISLPLKIAQNTNMKWRKKGDK 179
Query: 180 LNIEVDSQ 187
+N+E+ ++
Sbjct: 180 VNVELSNK 187
>sp|Q01993|RISA_PHOLE Riboflavin synthase OS=Photobacterium leiognathi GN=ribE PE=3 SV=1
Length = 218
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 107/189 (56%), Gaps = 9/189 (4%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTGI++ IG + A+ +N+ S+ + + + ++I S+A NGVCL+V+K+ + +
Sbjct: 1 MFTGIIESIGNIGAIIRHNEDLSIVVNTNNLDISDVNIGDSIATNGVCLTVSKLLPSGYT 60
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANV----RAIQALE 116
D+ ET K T + + Q VNLE++ T +GGH +SGH+ V V R +A+
Sbjct: 61 ADLSLETYKRTAFHSYRIGQEVNLEKAMLPTTRLGGHLVSGHVDGVGEVIEFKRNGRAIN 120
Query: 117 KNYRMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAV 176
+ +Q L KY+ KG V IDGISLTI V+++ + ++P T+ +T + +
Sbjct: 121 IWVAVPVQ-----LKKYLSEKGSVTIDGISLTINAVYQNVIKLTIVPHTLAETNLVNINI 175
Query: 177 GDALNIEVD 185
+N+E+D
Sbjct: 176 DKKVNVEID 184
>sp|A5DB51|RISA_PICGU Riboflavin synthase OS=Meyerozyma guilliermondii (strain ATCC 6260
/ CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL
Y-324) GN=RIB5 PE=2 SV=3
Length = 239
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 108/209 (51%), Gaps = 10/209 (4%)
Query: 1 MFTGIVQGIGKVSAV------FSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKI 54
MFTG+V+ IG V V S D SM I S +L+ + + S+ NGVCL+VT+
Sbjct: 1 MFTGLVEHIGTVLQVTEKDTTASGGDGVSMVIGDCSKILEDVQLGDSICTNGVCLTVTEF 60
Query: 55 EGNYISFDV--INETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAI 112
+ F V ETL+ ++L + VNLER+ K + +GGH + GH+ +A +
Sbjct: 61 DMARSQFKVGISPETLRRSDLGELKPGSKVNLERAVKADVRMGGHVVQGHVDTIATIVNR 120
Query: 113 QALEKNYRMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDY--FYVHLIPETMEKTT 170
+ ++ + KY+ KG++AIDG SLT+ V + F + ++ T EK
Sbjct: 121 RGDGNAINFTFKLRDSQYGKYIVEKGFIAIDGTSLTVTDVDHEQSEFSISMVSYTQEKVI 180
Query: 171 MSKKAVGDALNIEVDSQTQVIVNTVERVL 199
M K GD++NIEVD ++I +E L
Sbjct: 181 MPLKNSGDSVNIEVDLTGKLIEKQIELSL 209
>sp|P25082|LUXP_PHOPO Lumazine protein OS=Photobacterium phosphoreum GN=luxL PE=1 SV=1
Length = 189
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MF GIVQG+G + + +D + I FP D+LD + + +NG ++V +I G+ +
Sbjct: 1 MFKGIVQGVGIIKKISKNDDTQRHGITFPKDILDSVEKDTVMLVNGCSVTVVRITGDVVY 60
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
FD I++ + T + + V VNLE + +G L+G+I VA V I E +
Sbjct: 61 FD-IDQAINTTTFRKLEVGNKVNLEVRPGFGSLLGKGALTGNIKGVATVDNITEEEDLLK 119
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTT-MSKKAVGDA 179
+ I++ K L++ + + ++ I+G+S +I +V D ++ P+ + TT + G
Sbjct: 120 VYIKIP-KDLIENISSEDHIGINGVSNSIEEVSNDIICINY-PKNLSITTNLGTLETGSE 177
Query: 180 LNIE 183
+N+E
Sbjct: 178 VNVE 181
>sp|Q06877|LUXP_PHOLE Lumazine protein OS=Photobacterium leiognathi GN=lumP PE=1 SV=1
Length = 186
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 2/184 (1%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MF GIVQG G + ++ D + I FP + + + + +NG L+V +I G+ +
Sbjct: 1 MFRGIVQGRGVIRSISKSEDSQRHGIAFPEGMFQLVDVDTVMLVNGCSLTVVRILGDMVY 60
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
FD I++ L T + VNLE K VG L+G+I A V AI+ + +
Sbjct: 61 FD-IDQALGTTTFDGLKEGDQVNLEIHPKFGEVVGRGGLTGNIKGTALVAAIEENDAGFS 119
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+ I + K L + + K + IDGISL I + + ++ + + T ++ A +
Sbjct: 120 VLIDIP-KGLAENLTVKDDIGIDGISLPITDMSDSIITLNYSRDLLASTNIASLAKDVKV 178
Query: 181 NIEV 184
N+E+
Sbjct: 179 NVEI 182
>sp|Q5R077|Y525_IDILO UPF0753 protein IL0525 OS=Idiomarina loihiensis (strain ATCC
BAA-735 / DSM 15497 / L2-TR) GN=IL0525 PE=3 SV=1
Length = 757
Score = 34.3 bits (77), Expect = 0.74, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 105 DVANVRAIQALEKNYRMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVH--LI 162
DV V I + YR ++ KSL YV KG+ G+ L I + D +V L
Sbjct: 315 DVQAVFCIDVRSERYRRALEQAGKSLGSYVQSKGFAGFFGVPLAIQRKGRDVPHVPGLLQ 374
Query: 163 PETMEKTTMSKKAVGDALN 181
P K K++VG L+
Sbjct: 375 PAYYIKAPARKQSVGSLLS 393
>sp|Q255A6|SYM_CHLFF Methionine--tRNA ligase OS=Chlamydophila felis (strain Fe/C-56)
GN=metG PE=3 SV=1
Length = 551
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 53/126 (42%), Gaps = 18/126 (14%)
Query: 3 TGIVQGIGKVSAVFSYNDFKSMTIW--FPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
T VQ IGK + F F +M + P +D + S + G S K EGNYI
Sbjct: 283 TEYVQFIGKDNIPFHAAIFPAMELGQSIPYKKMDALISSEFYLLEGAQFS--KSEGNYID 340
Query: 61 FDVINETLKITNLKAVAV--------DQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAI 112
D +T + L+ V +F L+ + N+E+ G F G+ I+ R +
Sbjct: 341 MDAFLDTYSLDKLRYVLAATAPETSDSEFTFLDFKTRCNSELVGKF--GNFIN----RVL 394
Query: 113 QALEKN 118
EKN
Sbjct: 395 AFAEKN 400
>sp|Q85FM7|RPOB_ADICA DNA-directed RNA polymerase subunit beta OS=Adiantum
capillus-veneris GN=rpoB PE=2 SV=2
Length = 1071
Score = 32.3 bits (72), Expect = 2.9, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 39 SCSVAINGVCLSVTKIEGNYISFDVINETLKITNLKAVAVDQFVNLERS-------AKMN 91
S SVAI+ V I+GN I +I+E K + +++ ERS K
Sbjct: 567 SGSVAISEQDGKVCYIDGNRIELSLIHEAKKNKLAQPTTIEELKIFERSNNNTCMHQKPA 626
Query: 92 TEVGGHFLSGHII--DVANVRAIQALEKNYRMEIQMTNKSLMKYVFYKGYVAIDGISLTI 149
+G G I+ A VR AL KN L+ Y+ ++GY D + ++
Sbjct: 627 VSLGELLRGGEIVADGAATVRGELALGKNI----------LVAYMPWEGYNFEDAVLISE 676
Query: 150 GKVFEDYF 157
++ED F
Sbjct: 677 RLIYEDIF 684
>sp|Q54U65|7TMK2_DICDI Seven transmembrane domain-containing serine/threonine-protein
kinase 2 OS=Dictyostelium discoideum GN=7tmk2 PE=3 SV=1
Length = 704
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 95 GGHFLSGHIIDVANVRAIQALEKNYRMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFE 154
GG F + D N I++LE R+ ++ + + V Y+G + G S G++FE
Sbjct: 344 GGTFAVKVMKDCTN-EDIESLENEIRVYEKLKSPYI---VSYQGSSKVVGSS---GQIFE 396
Query: 155 DYFYVHLIPETMEKTTMSKKAVGDA 179
++ IP T++K +++ GD+
Sbjct: 397 IRLFMEYIPHTLDKYLLARSVCGDS 421
>sp|Q9F0J6|ROO_DESGI Rubredoxin-oxygen oxidoreductase OS=Desulfovibrio gigas GN=roo PE=1
SV=1
Length = 402
Score = 30.8 bits (68), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 11/106 (10%)
Query: 112 IQALEKNYRMEIQMTNKSLMKYVFYKGY---VAIDGISLTIGKVFEDYFYVHLI--PETM 166
I+A + + K++ + YK + V G +L++GK ++ ++ P++M
Sbjct: 92 IEACQPEKIFTSSLGQKAMESHFHYKDWPVQVVKHGETLSLGKRTVTFYETRMLHWPDSM 151
Query: 167 ------EKTTMSKKAVGDALNIEVDSQTQVIVNTVERVLKENYGNL 206
EK +S G + Q+ V+T+ER ++E Y N+
Sbjct: 152 VSWFADEKVLISNDIFGQNIAASERFSDQIPVHTLERAMREYYANI 197
>sp|Q39XX9|RPOA_GEOMG DNA-directed RNA polymerase subunit alpha OS=Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
GN=rpoA PE=3 SV=1
Length = 340
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 33 LDGISISCSVAINGVCLSVTKIEGNYISFDVINETLKITNLKAVAVDQFVNLERSAKMNT 92
L G +IS SV I GV + I G ++ DV N I NLK V++ N R+ ++
Sbjct: 53 LQGAAIS-SVKIKGVLHEFSSIPG--VTEDVTN---IILNLKGVSLKMHGNEARTVRIIH 106
Query: 93 EVGGHFLSGHIIDVANVRA------IQALEKNYRMEIQMTNKSLMKYVFYKGYVAID 143
+ G +G I+ ANV I K+ +E++M K KGYV D
Sbjct: 107 KGDGIVKAGDIVTDANVEILNPDHHIATCSKDANLEMEMVVK------LGKGYVPSD 157
>sp|Q5L5M3|SYM_CHLAB Methionine--tRNA ligase OS=Chlamydophila abortus (strain S26/3)
GN=metG PE=3 SV=1
Length = 551
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 12/106 (11%)
Query: 3 TGIVQGIGKVSAVFSYNDFKSMTIW--FPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
T VQ IGK + F F +M + P +D + S + G S K EGNYI
Sbjct: 283 TEYVQFIGKDNIPFHAAIFPAMELGQSIPYKKMDALVSSEFYLLEGCQFS--KSEGNYID 340
Query: 61 FDVINETLKITNLKAVAV--------DQFVNLERSAKMNTEVGGHF 98
D +T + L+ V +F ++ + N+E+ G F
Sbjct: 341 IDTFLDTYSLDKLRYVLAATAPETSDSEFTFMDFKTRCNSELVGKF 386
>sp|Q6BE24|CUCS_CUCPE Cucurbitadienol synthase OS=Cucurbita pepo GN=CPQ PE=1 SV=1
Length = 764
Score = 30.4 bits (67), Expect = 9.9, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 118 NYRMEIQMTNKSLMKYVFYKGYVAIDGI--SLTIGKVFEDYFYVHLIPETMEKTTMSKKA 175
N + +Q N Y + Y ++ I + T G + DY YV TME T+ KK
Sbjct: 525 NVLLSLQNDNGGFASYELTRSYPWLELINPAETFGDIVIDYPYVECTAATMEALTLFKKL 584
Query: 176 VGDALNIEVDSQTQVIVNTVERVLKEN 202
E+D+ N +E++ + +
Sbjct: 585 HPGHRTKEIDTAIGKAANFLEKMQRAD 611
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,576,402
Number of Sequences: 539616
Number of extensions: 2815989
Number of successful extensions: 8467
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 8366
Number of HSP's gapped (non-prelim): 53
length of query: 229
length of database: 191,569,459
effective HSP length: 113
effective length of query: 116
effective length of database: 130,592,851
effective search space: 15148770716
effective search space used: 15148770716
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)