Your job contains 1 sequence.
>psy4641
MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS
FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR
MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL
NIEVDSQTQVIVNTVERVLKENYGNLRCLCHCTIETTEDGSEEEQSHNH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4641
(229 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P0AFU8 - symbol:ribC "RibC" species:83333 "Esch... 532 3.1e-51 1
TIGR_CMR|SO_2296 - symbol:SO_2296 "riboflavin synthase, a... 471 9.1e-45 1
TIGR_CMR|CHY_1474 - symbol:CHY_1474 "riboflavin synthase,... 319 1.2e-28 1
UNIPROTKB|G4MSU9 - symbol:MGG_04586 "Riboflavin synthase"... 313 5.0e-28 1
ASPGD|ASPL0000012340 - symbol:AN4231 species:162425 "Emer... 311 8.2e-28 1
POMBASE|SPCC1450.13c - symbol:SPCC1450.13c "riboflavin sy... 310 1.0e-27 1
TIGR_CMR|NSE_0853 - symbol:NSE_0853 "riboflavin synthase,... 301 9.4e-27 1
TIGR_CMR|GSU_1689 - symbol:GSU_1689 "riboflavin synthase,... 296 3.2e-26 1
TIGR_CMR|BA_4332 - symbol:BA_4332 "riboflavin synthase, a... 293 6.6e-26 1
TIGR_CMR|CBU_0646 - symbol:CBU_0646 "riboflavin synthase,... 292 8.4e-26 1
UNIPROTKB|P65327 - symbol:ribE "Riboflavin synthase" spec... 288 2.2e-25 1
SGD|S000000460 - symbol:RIB5 "Riboflavin synthase" specie... 286 3.6e-25 1
TIGR_CMR|ECH_0239 - symbol:ECH_0239 "riboflavin synthase,... 285 4.6e-25 1
TIGR_CMR|SPO_1759 - symbol:SPO_1759 "riboflavin synthase,... 285 4.6e-25 1
CGD|CAL0004725 - symbol:RIB5 species:5476 "Candida albica... 278 2.6e-24 1
TIGR_CMR|SO_3468 - symbol:SO_3468 "riboflavin synthase, a... 278 2.6e-24 1
UNIPROTKB|Q9KPU2 - symbol:VC_2270 "Riboflavin synthase, a... 269 2.3e-23 1
TIGR_CMR|CPS_0731 - symbol:CPS_0731 "riboflavin synthase,... 269 2.3e-23 1
TIGR_CMR|VC_2270 - symbol:VC_2270 "riboflavin synthase, a... 269 2.3e-23 1
TIGR_CMR|DET_1189 - symbol:DET_1189 "riboflavin synthase,... 267 3.8e-23 1
TIGR_CMR|APH_0106 - symbol:APH_0106 "riboflavin synthase,... 259 2.6e-22 1
TAIR|locus:2051394 - symbol:AT2G20690 species:3702 "Arabi... 252 1.5e-21 1
TIGR_CMR|CJE_1353 - symbol:CJE_1353 "riboflavin synthase,... 219 4.6e-18 1
>UNIPROTKB|P0AFU8 [details] [associations]
symbol:ribC "RibC" species:83333 "Escherichia coli K-12"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0009231 "riboflavin
biosynthetic process" evidence=IEA;IDA] [GO:0004746 "riboflavin
synthase activity" evidence=IEA;IDA] InterPro:IPR001783
InterPro:IPR017938 PIRSF:PIRSF000498 UniPathway:UPA00275
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016491 SUPFAM:SSF63380
DrugBank:DB00140 GO:GO:0009231 Gene3D:2.40.30.20 InterPro:IPR023366
EMBL:X69109 EMBL:U68703 GO:GO:0000906 PIR:S28526 RefSeq:NP_416179.1
RefSeq:YP_489926.1 PDB:1HZE PDB:1I18 PDB:1I8D PDB:1PKV PDBsum:1HZE
PDBsum:1I18 PDBsum:1I8D PDBsum:1PKV ProteinModelPortal:P0AFU8
SMR:P0AFU8 DIP:DIP-47865N IntAct:P0AFU8 SWISS-2DPAGE:P0AFU8
PRIDE:P0AFU8 EnsemblBacteria:EBESCT00000003011
EnsemblBacteria:EBESCT00000018130 GeneID:12932660 GeneID:945848
KEGG:ecj:Y75_p1639 KEGG:eco:b1662 PATRIC:32118630 EchoBASE:EB1378
EcoGene:EG11406 eggNOG:COG0307 HOGENOM:HOG000151758 KO:K00793
OMA:HILSGHV ProtClustDB:PRK09289
BioCyc:EcoCyc:RIBOFLAVIN-SYN-MONOMER
BioCyc:ECOL316407:JW1654-MONOMER
BioCyc:MetaCyc:RIBOFLAVIN-SYN-MONOMER EvolutionaryTrace:P0AFU8
Genevestigator:P0AFU8 GO:GO:0004746 InterPro:IPR026017
PANTHER:PTHR21098 Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177
Uniprot:P0AFU8
Length = 213
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 103/207 (49%), Positives = 146/207 (70%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTGIVQG K+ ++ +F++ + P +LDG+ SVA NG CL+VT+I GN++S
Sbjct: 1 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVS 60
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
FD++ ETL+ITNL + V +VN+ER+AK + E+GGH +SGHI+ A V I E N +
Sbjct: 61 FDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQ 120
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+ ++ + LMKY+ YKG++ IDGISLT+G+V F VHLIPET+E+TT+ KK +G +
Sbjct: 121 IWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARV 180
Query: 181 NIEVDSQTQVIVNTVERVL--KENYGN 205
NIE+D QTQ +V+TVERVL +EN N
Sbjct: 181 NIEIDPQTQAVVDTVERVLAARENAMN 207
>TIGR_CMR|SO_2296 [details] [associations]
symbol:SO_2296 "riboflavin synthase, alpha subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0004746 "riboflavin
synthase activity" evidence=ISS] [GO:0009231 "riboflavin
biosynthetic process" evidence=ISS] InterPro:IPR001783
InterPro:IPR017938 PIRSF:PIRSF000498 GO:GO:0016491 EMBL:AE014299
GenomeReviews:AE014299_GR SUPFAM:SSF63380 GO:GO:0009231
Gene3D:2.40.30.20 InterPro:IPR023366 HOGENOM:HOG000151758 KO:K00793
OMA:HILSGHV GO:GO:0004746 InterPro:IPR026017 PANTHER:PTHR21098
Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177 HSSP:P29015
RefSeq:NP_717892.1 ProteinModelPortal:Q8EES2 GeneID:1170021
KEGG:son:SO_2296 PATRIC:23524215 ProtClustDB:PRK13020
Uniprot:Q8EES2
Length = 206
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 94/206 (45%), Positives = 137/206 (66%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTGIVQ +V A+ + ++ + F DL +G++I SVA NGVCL+VT++ + +
Sbjct: 1 MFTGIVQATCEVVAIHKKDGLNTLEVAFKPDLHEGLAIGASVANNGVCLTVTQVVDDRVF 60
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
FDV+ ETL++TNL ++V Q VN+ERS +E+GGH LSGHI A V I ++Y
Sbjct: 61 FDVVEETLRLTNLAGLSVGQHVNIERSLTFGSEIGGHILSGHIHTKAKVSHISHTAQHYD 120
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+ + + K M Y+ YKG+V ++G SLT+G+V + F +HLIPET++ T + + VGD
Sbjct: 121 LTLSVEPK-WMNYILYKGFVGVNGCSLTVGEVTDCSFMLHLIPETLKLTNLGQCQVGDEF 179
Query: 181 NIEVDSQTQVIVNTVERVLKENYGNL 206
NIE+DSQTQ IV+TVERVL + + L
Sbjct: 180 NIEIDSQTQAIVDTVERVLAKRFNGL 205
>TIGR_CMR|CHY_1474 [details] [associations]
symbol:CHY_1474 "riboflavin synthase, alpha subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004746 "riboflavin synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
InterPro:IPR001783 InterPro:IPR017938 PIRSF:PIRSF000498
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016491
SUPFAM:SSF63380 GO:GO:0009231 Gene3D:2.40.30.20 InterPro:IPR023366
eggNOG:COG0307 KO:K00793 ProtClustDB:PRK09289 GO:GO:0004746
InterPro:IPR026017 PANTHER:PTHR21098 Pfam:PF00677
TIGRFAMs:TIGR00187 PROSITE:PS51177 OMA:SRYVVEK HOGENOM:HOG000151757
RefSeq:YP_360306.1 ProteinModelPortal:Q3AC28 STRING:Q3AC28
GeneID:3726574 KEGG:chy:CHY_1474 PATRIC:21276079
BioCyc:CHYD246194:GJCN-1473-MONOMER Uniprot:Q3AC28
Length = 213
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 66/197 (33%), Positives = 117/197 (59%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTG+V+ +G+V + + ++T+ + +L+ I + S+A+NG CL+V +Y
Sbjct: 1 MFTGLVEELGRVREIKKSGESLTLTVEAKT-ILEDIKLGDSIAVNGTCLTVVNFGNDYFE 59
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
DV+ ET TNLK ++ VNLER+ + +GGH + GH+ +V + I+A E
Sbjct: 60 ADVMPETYTKTNLKFLSPGDRVNLERTLRPTDRLGGHIVQGHVDEVGWIVEIRAKEIAKI 119
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
++I+ ++ ++Y+ KG VA+DGISLT+ V+ D F V +IP T + TT+ K +G +
Sbjct: 120 IKIK-ASEGFLQYLVPKGSVAVDGISLTVVDVYNDSFTVSIIPHTFKNTTLGYKTIGSPV 178
Query: 181 NIEVDSQTQVIVNTVER 197
N+E D + + + +++
Sbjct: 179 NLEADILAKYVFSFIKK 195
>UNIPROTKB|G4MSU9 [details] [associations]
symbol:MGG_04586 "Riboflavin synthase" species:242507
"Magnaporthe oryzae 70-15" [GO:0004746 "riboflavin synthase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0009231 "riboflavin
biosynthetic process" evidence=ISS] InterPro:IPR001783
InterPro:IPR017938 PIRSF:PIRSF000498 GO:GO:0005829 GO:GO:0005634
GO:GO:0016491 SUPFAM:SSF63380 GO:GO:0009231 EMBL:CM001232
Gene3D:2.40.30.20 InterPro:IPR023366 KO:K00793 GO:GO:0004746
InterPro:IPR026017 PANTHER:PTHR21098 Pfam:PF00677
TIGRFAMs:TIGR00187 PROSITE:PS51177 RefSeq:XP_003713610.1
ProteinModelPortal:G4MSU9 SMR:G4MSU9 EnsemblFungi:MGG_04586T0
GeneID:2678113 KEGG:mgr:MGG_04586 Uniprot:G4MSU9
Length = 214
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 76/192 (39%), Positives = 112/192 (58%)
Query: 1 MFTGIVQGIGKVSAVFSYNDF--KSMTIWFP--SDLLDGISISCSVAINGVCLSVTKIEG 56
MFTGIV+ IG V+ + ++ S+TI P S LL S+A+NGVCL+VT
Sbjct: 1 MFTGIVEEIGVVAELNPHDATGGTSLTISLPTGSSLLSDCHDGDSIAVNGVCLTVTSFTP 60
Query: 57 NYISFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALE 116
+ V ETL++T+L + D VNLER+ + +T +GGHF+ GH+ A + QA
Sbjct: 61 TQFTVGVAPETLRVTDLGDLVKDSRVNLERAVRADTRMGGHFVQGHVDTTATIADKQADG 120
Query: 117 KNYRMEIQMTNKS-LMKYVFYKGYVAIDGISLTIGKVFE--DYFYVHLIPETMEKTTMSK 173
M + S ++KY+ KGYVA+DG SLT+ KV + ++ V LI T E+ +++
Sbjct: 121 NAVTMRFKPREGSDVLKYIVRKGYVALDGTSLTVTKVDDAAGWWEVMLIVYTQERVVLAQ 180
Query: 174 KAVGDALNIEVD 185
K VGD +N+EVD
Sbjct: 181 KNVGDTVNVEVD 192
>ASPGD|ASPL0000012340 [details] [associations]
symbol:AN4231 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0009231 "riboflavin
biosynthetic process" evidence=IEA] [GO:0004746 "riboflavin
synthase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001783 InterPro:IPR017938 PIRSF:PIRSF000498
GO:GO:0016491 EMBL:BN001302 SUPFAM:SSF63380 GO:GO:0009231
Gene3D:2.40.30.20 InterPro:IPR023366 EMBL:AACD01000068
eggNOG:COG0307 KO:K00793 GO:GO:0004746 InterPro:IPR026017
PANTHER:PTHR21098 Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177
OMA:SRYVVEK HOGENOM:HOG000151757 OrthoDB:EOG4KSSV0
RefSeq:XP_661835.1 ProteinModelPortal:Q5B5E9 SMR:Q5B5E9
STRING:Q5B5E9 EnsemblFungi:CADANIAT00004429 GeneID:2873655
KEGG:ani:AN4231.2 Uniprot:Q5B5E9
Length = 234
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 72/205 (35%), Positives = 117/205 (57%)
Query: 1 MFTGIVQGIGKVSAV------FSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKI 54
MFTG+V+ IG VS++ S S+TI +L + + S+++NG CL+VT
Sbjct: 1 MFTGLVETIGTVSSLEPLDTSASGGGGTSLTITDCDTILTDVQLGDSISVNGACLTVTAF 60
Query: 55 EGNYISFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQA 114
E N+ V ETL+ TNL ++ VNLER+ K T +GGH + GH+ +A + A+
Sbjct: 61 EKNWFKVGVAPETLRRTNLGSLTETSKVNLERAVKGETRMGGHIVQGHVDTIAKIIAMTP 120
Query: 115 LEKNYRMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVF--ED-YFYVHLIPETMEKTTM 171
E + + +Q + ++++Y+ KG++ +DG SLTI +V ED +F + LI T EK
Sbjct: 121 DENSLVLRLQPRDPAVLRYIVEKGFITLDGASLTITQVKDGEDGWFEIMLIAYTQEKIVT 180
Query: 172 SKKAVGDALNIEVDSQTQVIVNTVE 196
+ K VGD +N+E+D + + V+
Sbjct: 181 AAKRVGDFVNVEIDVVAKYVEKGVQ 205
>POMBASE|SPCC1450.13c [details] [associations]
symbol:SPCC1450.13c "riboflavin synthase" species:4896
"Schizosaccharomyces pombe" [GO:0004746 "riboflavin synthase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009231 "riboflavin
biosynthetic process" evidence=IDA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEP] InterPro:IPR001783 InterPro:IPR017938
PIRSF:PIRSF000498 UniPathway:UPA00275 PomBase:SPCC1450.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0033554 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0016491 SUPFAM:SSF63380
GO:GO:0009231 Gene3D:2.40.30.20 InterPro:IPR023366 eggNOG:COG0307
KO:K00793 GO:GO:0004746 InterPro:IPR026017 PANTHER:PTHR21098
Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177 OMA:SRYVVEK
EMBL:AF505789 PIR:T40995 RefSeq:NP_588312.1 PDB:1KZL PDBsum:1KZL
ProteinModelPortal:Q9Y7P0 SMR:Q9Y7P0 STRING:Q9Y7P0
EnsemblFungi:SPCC1450.13c.1 GeneID:2539183 KEGG:spo:SPCC1450.13c
HOGENOM:HOG000151757 OrthoDB:EOG4KSSV0 BRENDA:2.5.1.9
EvolutionaryTrace:Q9Y7P0 NextBio:20800354 Uniprot:Q9Y7P0
Length = 208
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 71/189 (37%), Positives = 108/189 (57%)
Query: 1 MFTGIVQGIGKVSAVFSY--NDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNY 58
MFTG+V+ IG V V N F +M I P +LD S+A+NG CL+VT + +
Sbjct: 1 MFTGLVEAIGVVKDVQGTIDNGF-AMKIEAPQ-ILDDCHTGDSIAVNGTCLTVTDFDRYH 58
Query: 59 ISFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKN 118
+ + E+L++TNL VNLER+ +T +GGHF+ GH+ VA + ++ +
Sbjct: 59 FTVGIAPESLRLTNLGQCKAGDPVNLERAVLSSTRMGGHFVQGHVDTVAEI--VEKKQDG 116
Query: 119 YRMEIQMTNKS--LMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAV 176
++ + ++KY+ YKGY+A+DG SLTI V + F + +I T K M+KK V
Sbjct: 117 EAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHVDDSTFSIMMISYTQSKVIMAKKNV 176
Query: 177 GDALNIEVD 185
GD +N+EVD
Sbjct: 177 GDLVNVEVD 185
>TIGR_CMR|NSE_0853 [details] [associations]
symbol:NSE_0853 "riboflavin synthase, alpha subunit"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004746
"riboflavin synthase activity" evidence=ISS] [GO:0009231
"riboflavin biosynthetic process" evidence=ISS] InterPro:IPR001783
InterPro:IPR017938 PIRSF:PIRSF000498 GO:GO:0016491 SUPFAM:SSF63380
GO:GO:0009231 EMBL:CP000237 GenomeReviews:CP000237_GR
Gene3D:2.40.30.20 InterPro:IPR023366 eggNOG:COG0307 KO:K00793
ProtClustDB:PRK09289 GO:GO:0004746 InterPro:IPR026017
PANTHER:PTHR21098 Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177
OMA:SRYVVEK HOGENOM:HOG000151757 RefSeq:YP_506720.1
ProteinModelPortal:Q2GCS6 STRING:Q2GCS6 GeneID:3932253
KEGG:nse:NSE_0853 PATRIC:22681703
BioCyc:NSEN222891:GHFU-857-MONOMER Uniprot:Q2GCS6
Length = 200
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 66/185 (35%), Positives = 101/185 (54%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MF GIVQ +G V+ + D + +L + + S+A NGVCL+VT I +
Sbjct: 1 MFKGIVQTLGLVTKLI-VRDKQIFLAVDAKELAQSVELGSSIACNGVCLTVTSITNTELE 59
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
F V ET TN A+ VNLE S ++ + GHF+ GH+ + + AI+ +++
Sbjct: 60 FYVSQETFSRTNFHALEKGSKVNLETSLRIGDTLDGHFVQGHVDETTMITAIEKTGESHV 119
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+T + + ++ YKG V IDG SLT+ +VFE+ F V++IP T +T K VGD +
Sbjct: 120 FTFALT-EGISPFITYKGSVCIDGTSLTVNEVFENEFSVNIIPYTWSQTIFHSKKVGDKV 178
Query: 181 NIEVD 185
N+E D
Sbjct: 179 NVESD 183
>TIGR_CMR|GSU_1689 [details] [associations]
symbol:GSU_1689 "riboflavin synthase, alpha subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004746
"riboflavin synthase activity" evidence=ISS] [GO:0009231
"riboflavin biosynthetic process" evidence=ISS] InterPro:IPR001783
InterPro:IPR017938 PIRSF:PIRSF000498 GO:GO:0016491 EMBL:AE017180
GenomeReviews:AE017180_GR SUPFAM:SSF63380 GO:GO:0009231
Gene3D:2.40.30.20 InterPro:IPR023366 KO:K00793 ProtClustDB:PRK09289
GO:GO:0004746 InterPro:IPR026017 PANTHER:PTHR21098 Pfam:PF00677
TIGRFAMs:TIGR00187 PROSITE:PS51177 OMA:SRYVVEK HOGENOM:HOG000151757
RefSeq:NP_952740.1 ProteinModelPortal:Q74CI4 GeneID:2685351
KEGG:gsu:GSU1689 PATRIC:22026227
BioCyc:GSUL243231:GH27-1710-MONOMER Uniprot:Q74CI4
Length = 217
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 67/199 (33%), Positives = 112/199 (56%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTG+++ +G + + + + L + +++ SVA+NG CL+V G ++
Sbjct: 1 MFTGLIEDVGTARRLERRGEAARLAVATALPL-ESVNLGDSVAVNGACLTVVAKGGGELT 59
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
FDV E+L+ T + ++A VNLER+ ++ +GGH ++GH+ VA V + + N
Sbjct: 60 FDVSPESLERTTIGSLATGAPVNLERALRLGDRLGGHLVTGHVDLVATVEGRREVSGNIL 119
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+M + +Y+ KG VA+DGISLT+ +V D F V++IP T KTT+ GD +
Sbjct: 120 FTFRMAS-GFSRYLVAKGSVAVDGISLTVNRVDADSFSVNVIPHTAVKTTLEHLRPGDRV 178
Query: 181 NIEVDSQTQVIVNTVERVL 199
NIE D ++ +ER+L
Sbjct: 179 NIETD----ILGKYIERLL 193
>TIGR_CMR|BA_4332 [details] [associations]
symbol:BA_4332 "riboflavin synthase, alpha subunit"
species:198094 "Bacillus anthracis str. Ames" [GO:0004746
"riboflavin synthase activity" evidence=ISS] [GO:0009231
"riboflavin biosynthetic process" evidence=ISS] InterPro:IPR001783
InterPro:IPR017938 PIRSF:PIRSF000498 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016491 SUPFAM:SSF63380
GO:GO:0009231 Gene3D:2.40.30.20 InterPro:IPR023366 KO:K00793
ProtClustDB:PRK09289 GO:GO:0004746 InterPro:IPR026017
PANTHER:PTHR21098 Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177
OMA:SRYVVEK HOGENOM:HOG000151757 HSSP:Q9Y7P0 RefSeq:NP_846565.1
RefSeq:YP_020978.1 RefSeq:YP_030269.1 ProteinModelPortal:Q81MB7
DNASU:1087524 EnsemblBacteria:EBBACT00000012464
EnsemblBacteria:EBBACT00000016965 EnsemblBacteria:EBBACT00000022677
GeneID:1087524 GeneID:2818521 GeneID:2850343 KEGG:ban:BA_4332
KEGG:bar:GBAA_4332 KEGG:bat:BAS4019
BioCyc:BANT260799:GJAJ-4076-MONOMER
BioCyc:BANT261594:GJ7F-4216-MONOMER Uniprot:Q81MB7
Length = 214
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 64/200 (32%), Positives = 112/200 (56%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTGIV+ +G ++ + + +TI + +L + + S+A+NG+CL+VT +
Sbjct: 1 MFTGIVEELGTITNMQQSGEAMKLTI-HANKILSDVHLGDSIAVNGICLTVTSFTTTSFT 59
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
D + ET+K T+L+ + VNLER+ N GGHF+SGHI + + +
Sbjct: 60 VDAMPETMKSTSLRLLKSHSKVNLERAMAANGRFGGHFVSGHIDGIGTILNKKQHYNAIY 119
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+I ++++ L++Y +KG +A+DG SLTI + E + LIP T+ ++ + +K GD +
Sbjct: 120 YKIAISDE-LLRYCLHKGSIAVDGTSLTIFDIDESSITISLIPHTVSESVIGEKNAGDIV 178
Query: 181 NIEVDSQTQVIVNTVERVLK 200
NIE D + I + + +K
Sbjct: 179 NIECDMIGKYIERFITKPVK 198
>TIGR_CMR|CBU_0646 [details] [associations]
symbol:CBU_0646 "riboflavin synthase, alpha subunit"
species:227377 "Coxiella burnetii RSA 493" [GO:0004746 "riboflavin
synthase activity" evidence=ISS] [GO:0009231 "riboflavin
biosynthetic process" evidence=ISS] InterPro:IPR001783
InterPro:IPR017938 PIRSF:PIRSF000498 GO:GO:0016491 EMBL:AE016828
GenomeReviews:AE016828_GR SUPFAM:SSF63380 GO:GO:0009231
Gene3D:2.40.30.20 InterPro:IPR023366 KO:K00793 ProtClustDB:PRK09289
GO:GO:0004746 InterPro:IPR026017 PANTHER:PTHR21098 Pfam:PF00677
TIGRFAMs:TIGR00187 PROSITE:PS51177 HOGENOM:HOG000151757 OMA:ESSKTHF
RefSeq:NP_819676.2 PRIDE:Q83DQ0 GeneID:1208531 KEGG:cbu:CBU_0646
PATRIC:17929971 BioCyc:CBUR227377:GJ7S-643-MONOMER Uniprot:Q83DQ0
Length = 207
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 64/199 (32%), Positives = 113/199 (56%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTGI+ G++ ++ + D ++I + D + + S+AI+G+C++VT+ + S
Sbjct: 6 MFTGIINHCGEIRSMEALPDHTVLSI--DTQFSD-LQLGESIAIDGICVTVTQKKLGSFS 62
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
D+ ETL T + + +NLER+ ++ +GGHF+SGH+ A + + + + +
Sbjct: 63 CDLSPETLACTKARDYKIGSRINLERALRLTDRLGGHFVSGHVDQTAILESQKKHAEFIQ 122
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
M+ + +++ Y+ KG VA++G+SLT+ V DYF V LIP T+E T ++ G +
Sbjct: 123 MDFKNSSEERWNYLIPKGSVAVNGVSLTVNSVAGDYFSVMLIPHTLEHTNLNDLKEGQIV 182
Query: 181 NIEVDSQTQVIVNTVERVL 199
NIE D T++IV L
Sbjct: 183 NIEFDLITKIIVQKTREAL 201
>UNIPROTKB|P65327 [details] [associations]
symbol:ribE "Riboflavin synthase" species:1773
"Mycobacterium tuberculosis" [GO:0004746 "riboflavin synthase
activity" evidence=IDA] [GO:0009231 "riboflavin biosynthetic
process" evidence=IDA] InterPro:IPR001783 InterPro:IPR017938
PIRSF:PIRSF000498 UniPathway:UPA00275 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842576
GO:GO:0016491 SUPFAM:SSF63380 GO:GO:0009231 Gene3D:2.40.30.20
InterPro:IPR023366 eggNOG:COG0307 HOGENOM:HOG000151758 KO:K00793
ProtClustDB:PRK09289 GO:GO:0004746 InterPro:IPR026017
PANTHER:PTHR21098 Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177
PIR:A70902 RefSeq:NP_215928.1 RefSeq:NP_335907.1
RefSeq:YP_006514792.1 ProteinModelPortal:P65327 SMR:P65327
PRIDE:P65327 EnsemblBacteria:EBMYCT00000001303
EnsemblBacteria:EBMYCT00000070551 GeneID:13320001 GeneID:886690
GeneID:924516 KEGG:mtc:MT1456 KEGG:mtu:Rv1412 KEGG:mtv:RVBD_1412
PATRIC:18124970 TubercuList:Rv1412 OMA:SRYVVEK Uniprot:P65327
Length = 201
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 77/205 (37%), Positives = 114/205 (55%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKI--EGNY 58
MFTGIV+ G+V+ + D +TI P D S+A+NGVCL+V + +G +
Sbjct: 1 MFTGIVEERGEVTGREALVDAARLTIRGPMVTADA-GHGDSIAVNGVCLTVVDVLPDGQF 59
Query: 59 ISFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKN 118
+ DV+ ETL +NL + VNLER+A + + +GGH + GH+ + A E
Sbjct: 60 TA-DVMAETLNRSNLGELRPGSRVNLERAAALGSRLGGHIVQGHVDATGEIVARCPSEHW 118
Query: 119 YRMEIQMTNKSLMKYVFYKGYVAIDGISLTI---GKVFEDYFYVHLIPETMEKTTMSKKA 175
+ I+M S+ +YV KG + +DGISLT+ G D+F V LIP T E TT+ A
Sbjct: 119 EVVRIEMP-ASVARYVVEKGSITVDGISLTVSGLGAEQRDWFEVSLIPTTRELTTLGSAA 177
Query: 176 VGDALNIEVDSQTQVIVNTVERVLK 200
VG +N+EVD V+ VER+++
Sbjct: 178 VGTRVNLEVD----VVAKYVERLMR 198
>SGD|S000000460 [details] [associations]
symbol:RIB5 "Riboflavin synthase" species:4932 "Saccharomyces
cerevisiae" [GO:0009231 "riboflavin biosynthetic process"
evidence=IEA;IMP] [GO:0004746 "riboflavin synthase activity"
evidence=IEA;ISS;IDA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR001783 InterPro:IPR017938
PIRSF:PIRSF000498 UniPathway:UPA00275 SGD:S000000460 GO:GO:0016491
EMBL:BK006936 SUPFAM:SSF63380 EMBL:X70529 GO:GO:0009231
Gene3D:2.40.30.20 InterPro:IPR023366 eggNOG:COG0307 KO:K00793
GO:GO:0004746 InterPro:IPR026017 PANTHER:PTHR21098 Pfam:PF00677
TIGRFAMs:TIGR00187 PROSITE:PS51177 OMA:SRYVVEK HOGENOM:HOG000151757
OrthoDB:EOG4KSSV0 EMBL:Z21621 EMBL:Z36125 PIR:S34072
RefSeq:NP_009815.1 ProteinModelPortal:P38145 SMR:P38145
MINT:MINT-4477838 STRING:P38145 PaxDb:P38145 EnsemblFungi:YBR256C
GeneID:852559 KEGG:sce:YBR256C CYGD:YBR256c
BioCyc:MetaCyc:MONOMER3O-75 NextBio:971664 Genevestigator:P38145
GermOnline:YBR256C Uniprot:P38145
Length = 238
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 76/239 (31%), Positives = 121/239 (50%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKS------MTIWFPSDLLDGISISCSVAINGVCLSVTKI 54
MFTGIV+ +G V Y+D +S +TI +L + S+A+NGVCL+VT+
Sbjct: 1 MFTGIVECMGTVLENNPYDDSESGGQGVSITIGNAGSILTDCHVGDSIAVNGVCLTVTEF 60
Query: 55 EGNYISFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQA 114
+ + ET+K +N+ + VNLER+ + GGH++ GH+ VAN+ + +
Sbjct: 61 NNDSFKVGISPETIKRSNVASWIQGTQVNLERAVSQDVRFGGHYVQGHVDTVANIVSRRP 120
Query: 115 LEKNYRMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFE----DYFYVHLIPETMEKTT 170
+ Q+ ++ KY+ KG++ IDG SLTI KV FY+ +I T +
Sbjct: 121 EGNSIIFGFQLRDQEYFKYIVEKGFICIDGTSLTIIKVDPLSQGGAFYISMIKHTQDNVI 180
Query: 171 MSKKAVGDALNIEVDSQTQVIVNTVERVLKENYGNLRCLCHCTIETTEDGSEEEQSHNH 229
M K +GD +NIEVD ++I + L EN + + T+ T EE+ N+
Sbjct: 181 MPLKKIGDEVNIEVDLTGKIIEKQILLTL-ENQISKK---DSTLNTMISNIIEEKVRNY 235
>TIGR_CMR|ECH_0239 [details] [associations]
symbol:ECH_0239 "riboflavin synthase, alpha subunit"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0004746
"riboflavin synthase activity" evidence=ISS] [GO:0009231
"riboflavin biosynthetic process" evidence=ISS] InterPro:IPR001783
InterPro:IPR017938 PIRSF:PIRSF000498 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016491 SUPFAM:SSF63380
GO:GO:0009231 Gene3D:2.40.30.20 InterPro:IPR023366 eggNOG:COG0307
KO:K00793 ProtClustDB:PRK09289 GO:GO:0004746 InterPro:IPR026017
PANTHER:PTHR21098 Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177
OMA:SRYVVEK HOGENOM:HOG000151757 RefSeq:YP_507060.2
ProteinModelPortal:Q2GHM3 STRING:Q2GHM3 GeneID:3927689
KEGG:ech:ECH_0239 PATRIC:20576005
BioCyc:ECHA205920:GJNR-239-MONOMER Uniprot:Q2GHM3
Length = 207
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 66/205 (32%), Positives = 112/205 (54%)
Query: 1 MFTGIVQGIGKVSAV-FSYNDFKSMTIWFPSD--LLDGISISCSVAINGVCLSVTKIEGN 57
MF GI++ IG + V ++ + + I P++ L I S+ +G+CLS +++
Sbjct: 6 MFKGIIEDIGTIIQVDYTKGQDRRLVIK-PTNANFLSETKIGDSIGCSGICLSAVELDNE 64
Query: 58 YISFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEK 117
S DV + TL +T+ +NLE KM + GHF+ GH+ V N+ +I +
Sbjct: 65 CFSADVSDATLSVTSAAHWKEGTKINLELPLKMTDRLDGHFVQGHVDGVGNIISITNVNS 124
Query: 118 NYRMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVG 177
++ +E + + +L+KY+ KG +AIDG+SLTI + + V++IP T +KTT V
Sbjct: 125 SHNIEFHIPD-ALLKYMIRKGSIAIDGVSLTINSISNNILSVNIIPHTWKKTTFQYNKVN 183
Query: 178 DALNIEVDSQTQVIVNTVERVLKEN 202
D +NIEVD ++ +ER+ + N
Sbjct: 184 DNINIEVD----MLAKHLERLYEHN 204
>TIGR_CMR|SPO_1759 [details] [associations]
symbol:SPO_1759 "riboflavin synthase, alpha subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004746 "riboflavin
synthase activity" evidence=ISS] [GO:0009231 "riboflavin
biosynthetic process" evidence=ISS] InterPro:IPR001783
InterPro:IPR017938 PIRSF:PIRSF000498 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016491 SUPFAM:SSF63380
GO:GO:0009231 Gene3D:2.40.30.20 InterPro:IPR023366 KO:K00793
ProtClustDB:PRK09289 GO:GO:0004746 InterPro:IPR026017
PANTHER:PTHR21098 Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177
OMA:SRYVVEK HOGENOM:HOG000151757 RefSeq:YP_166997.1
ProteinModelPortal:Q5LSK8 GeneID:3193407 KEGG:sil:SPO1759
PATRIC:23376841 Uniprot:Q5LSK8
Length = 195
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 71/196 (36%), Positives = 108/196 (55%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYIS 60
MFTGIV IG V + D ++ I D GI I S+A +GVCL+V + ++
Sbjct: 1 MFTGIVTDIGTVVELEQRGDLRAR-IRTGYDT-SGIDIGASIASDGVCLTVIALGPDWYD 58
Query: 61 FDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNYR 120
++ ET+ TNL +V + VNLER+ K+ E+GGH +SGH+ VA V A+ + R
Sbjct: 59 VEISAETVSKTNLGGWSVGKRVNLERALKVGDELGGHIVSGHVDGVAEVVAMADEGDSTR 118
Query: 121 MEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGDAL 180
+ ++ L +++ KG VA++G SLT+ V F ++ IP T E TT AVGD +
Sbjct: 119 VTLRAP-ADLARFIAPKGSVALNGTSLTVNAVEGAEFGINFIPHTKEATTWGGVAVGDRV 177
Query: 181 NIEVDSQTQVIVNTVE 196
N+E+D + + E
Sbjct: 178 NLEIDMLARYVARLAE 193
>CGD|CAL0004725 [details] [associations]
symbol:RIB5 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0004746 "riboflavin synthase activity" evidence=IEA]
[GO:0009231 "riboflavin biosynthetic process" evidence=IEA]
InterPro:IPR001783 InterPro:IPR017938 CGD:CAL0004725 GO:GO:0016491
SUPFAM:SSF63380 GO:GO:0009231 Gene3D:2.40.30.20 InterPro:IPR023366
EMBL:AACQ01000012 EMBL:AACQ01000011 eggNOG:COG0307 KO:K00793
GO:GO:0004746 InterPro:IPR026017 PANTHER:PTHR21098 Pfam:PF00677
TIGRFAMs:TIGR00187 PROSITE:PS51177 RefSeq:XP_721932.1
RefSeq:XP_722093.1 ProteinModelPortal:Q5AJZ6 SMR:Q5AJZ6
STRING:Q5AJZ6 GeneID:3636322 GeneID:3636499 KEGG:cal:CaO19.11507
KEGG:cal:CaO19.4024 Uniprot:Q5AJZ6
Length = 279
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 71/206 (34%), Positives = 110/206 (53%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFK------SMTIWFPSDLLDGISISCSVAINGVCLSVTKI 54
MFTG+V+ IG V ++D S+TI S++L+ + + S++ NGVCL+VT+
Sbjct: 43 MFTGLVETIGTVLDYSKHDDSSTGGDGVSITIGNCSEILEDVKLGDSISTNGVCLTVTEF 102
Query: 55 E-GNYI-SFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAI 112
G + V ETL+ TNL + VNLER+ +GGH + GH+ +A +
Sbjct: 103 NLGKTLFKVGVAPETLRRTNLGDLKHGAPVNLERAVTSEVRLGGHIVQGHVDTIAKIVDK 162
Query: 113 QALEKNYRMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFED--YFYVHLIPETMEKTT 170
+ ++ +K + Y+ +KG++AIDG SLT+ V F + LI + EK
Sbjct: 163 KPDGNAIAYTFELRDKEFINYIVHKGFIAIDGASLTVTNVDPSKVQFSIMLISYSQEKVI 222
Query: 171 MSKKAVGDALNIEVDSQTQVIVNTVE 196
++KK VGD +NIEVD + I VE
Sbjct: 223 LAKKEVGDTVNIEVDLTGKFIEKQVE 248
>TIGR_CMR|SO_3468 [details] [associations]
symbol:SO_3468 "riboflavin synthase, alpha subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0004746 "riboflavin
synthase activity" evidence=ISS] [GO:0009231 "riboflavin
biosynthetic process" evidence=ISS] InterPro:IPR001783
InterPro:IPR017938 PIRSF:PIRSF000498 GO:GO:0016491 EMBL:AE014299
GenomeReviews:AE014299_GR SUPFAM:SSF63380 GO:GO:0009231
Gene3D:2.40.30.20 InterPro:IPR023366 KO:K00793 ProtClustDB:PRK09289
GO:GO:0004746 InterPro:IPR026017 PANTHER:PTHR21098 Pfam:PF00677
TIGRFAMs:TIGR00187 PROSITE:PS51177 OMA:SRYVVEK HOGENOM:HOG000151757
RefSeq:NP_719017.1 HSSP:P29015 ProteinModelPortal:Q8EBP1
GeneID:1171144 KEGG:son:SO_3468 PATRIC:23526632 Uniprot:Q8EBP1
Length = 218
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 68/203 (33%), Positives = 113/203 (55%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPS-DLLDGISISCSVAINGVCLSVTK-IEGNY 58
MFTGI++ +G + + D +T+ DL D + + S+A NGVCL+V + + Y
Sbjct: 1 MFTGIIEAVGTLRKLERKGDDIRLTVASGKLDLTD-VRLGDSIATNGVCLTVVQQLADGY 59
Query: 59 ISFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKN 118
++ DV ET+ +T V VNLE++ T +GGH +SGH+ +A V Q L +
Sbjct: 60 VA-DVSAETVSLTGFANYKVGTKVNLEKAVTPTTRLGGHMVSGHVDGIATVE--QRLARG 116
Query: 119 YRMEIQMTNKS-LMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVG 177
+E + + L +Y+ +KG + IDG+SLT+ +V F + ++P T +TT+ G
Sbjct: 117 QAIEFWLAAPTELARYIAHKGSITIDGVSLTVNEVDGHRFRLTIVPHTAGETTLVDLKAG 176
Query: 178 DALNIEVDSQTQVIVNTVERVLK 200
D +NIEVD +I +ER+++
Sbjct: 177 DKVNIEVD----LIARYLERLMR 195
>UNIPROTKB|Q9KPU2 [details] [associations]
symbol:VC_2270 "Riboflavin synthase, alpha subunit"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004746 "riboflavin synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
InterPro:IPR001783 InterPro:IPR017938 PIRSF:PIRSF000498
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0016491
SUPFAM:SSF63380 GO:GO:0009231 Gene3D:2.40.30.20 InterPro:IPR023366
KO:K00793 ProtClustDB:PRK09289 GO:GO:0004746 InterPro:IPR026017
PANTHER:PTHR21098 Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177
OMA:SRYVVEK HSSP:P29015 PIR:E82098 RefSeq:NP_231901.1
ProteinModelPortal:Q9KPU2 DNASU:2613192 GeneID:2613192
KEGG:vch:VC2270 PATRIC:20083581 Uniprot:Q9KPU2
Length = 217
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 67/203 (33%), Positives = 112/203 (55%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLD-G-ISISCSVAINGVCLSVTKIEGNY 58
MFTGIV+ +GK++A+ +TI LD G + + S+A NGVCL+V +
Sbjct: 1 MFTGIVEAVGKLTAIIPKGS--DVTISVDVGKLDMGDVKLGDSIATNGVCLTVVAFDQRS 58
Query: 59 ISFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKN 118
S D+ ETLK + V VNLE++ T GGH +SGH+ V + ++ +
Sbjct: 59 FSADLSMETLKKSGFAQYQVGDRVNLEKAMLPTTRFGGHIVSGHVDGVGEI--VERIPVG 116
Query: 119 YRMEIQMTNKS-LMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVG 177
+++ + + + KYV KG + +DGISLT+ + ++ F + ++P T +TT+ + VG
Sbjct: 117 RAVDLWVNMPAEISKYVAEKGSITVDGISLTVNDLRKNAFKLTIVPHTSAETTIDEFQVG 176
Query: 178 DALNIEVDSQTQVIVNTVERVLK 200
+N+EVD V+ +ER+L+
Sbjct: 177 RRVNLEVD----VLARYMERLLQ 195
>TIGR_CMR|CPS_0731 [details] [associations]
symbol:CPS_0731 "riboflavin synthase, alpha subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004746
"riboflavin synthase activity" evidence=ISS] [GO:0009231
"riboflavin biosynthetic process" evidence=ISS] InterPro:IPR001783
InterPro:IPR017938 PIRSF:PIRSF000498 GO:GO:0016491 EMBL:CP000083
GenomeReviews:CP000083_GR SUPFAM:SSF63380 GO:GO:0009231
Gene3D:2.40.30.20 InterPro:IPR023366 eggNOG:COG0307 KO:K00793
ProtClustDB:PRK09289 GO:GO:0004746 InterPro:IPR026017
PANTHER:PTHR21098 Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177
OMA:SRYVVEK HOGENOM:HOG000151757 RefSeq:YP_267481.1
ProteinModelPortal:Q488N3 STRING:Q488N3 GeneID:3520699
KEGG:cps:CPS_0731 PATRIC:21464777
BioCyc:CPSY167879:GI48-818-MONOMER Uniprot:Q488N3
Length = 232
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 75/219 (34%), Positives = 117/219 (53%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPS-DLLDGISISCSVAINGVCLSVT-----KI 54
MFTGI++ +G +SA+ + I S D+ D + + S+A NG+CL+V K
Sbjct: 1 MFTGIIEAVGTISAINVNAQGARLVIATNSLDMSD-VKLGDSIATNGICLTVVDFNNGKG 59
Query: 55 EGNYISFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQA 114
G+Y S DV NETL+ T V VNLE++ +T GGH +SGH+ V+ + AI
Sbjct: 60 NGSY-SADVSNETLQRTGFAGYKVGSKVNLEKAMLASTRFGGHMVSGHVDGVSEILAINN 118
Query: 115 LEKNYRMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFED--------YFYVHLIPETM 166
+ + M + L Y+ KG V IDG SLT+ + E+ F + ++P T+
Sbjct: 119 NGNSIEYWLSMPS-DLAHYIAEKGSVTIDGTSLTVNALAEEGSKGHSQGSFRLTIVPHTV 177
Query: 167 EKTTMSKKAVGDALNIEVDSQTQVIVNTVERVLKENYGN 205
++T ++ VG +NIEVD +I +ER+L ++ GN
Sbjct: 178 KETIFAEYQVGSKVNIEVD----LIARYLERLLTKSGGN 212
>TIGR_CMR|VC_2270 [details] [associations]
symbol:VC_2270 "riboflavin synthase, alpha subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004746
"riboflavin synthase activity" evidence=ISS] [GO:0009231
"riboflavin biosynthetic process" evidence=ISS] InterPro:IPR001783
InterPro:IPR017938 PIRSF:PIRSF000498 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0016491 SUPFAM:SSF63380
GO:GO:0009231 Gene3D:2.40.30.20 InterPro:IPR023366 KO:K00793
ProtClustDB:PRK09289 GO:GO:0004746 InterPro:IPR026017
PANTHER:PTHR21098 Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177
OMA:SRYVVEK HSSP:P29015 PIR:E82098 RefSeq:NP_231901.1
ProteinModelPortal:Q9KPU2 DNASU:2613192 GeneID:2613192
KEGG:vch:VC2270 PATRIC:20083581 Uniprot:Q9KPU2
Length = 217
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 67/203 (33%), Positives = 112/203 (55%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDLLD-G-ISISCSVAINGVCLSVTKIEGNY 58
MFTGIV+ +GK++A+ +TI LD G + + S+A NGVCL+V +
Sbjct: 1 MFTGIVEAVGKLTAIIPKGS--DVTISVDVGKLDMGDVKLGDSIATNGVCLTVVAFDQRS 58
Query: 59 ISFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKN 118
S D+ ETLK + V VNLE++ T GGH +SGH+ V + ++ +
Sbjct: 59 FSADLSMETLKKSGFAQYQVGDRVNLEKAMLPTTRFGGHIVSGHVDGVGEI--VERIPVG 116
Query: 119 YRMEIQMTNKS-LMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVG 177
+++ + + + KYV KG + +DGISLT+ + ++ F + ++P T +TT+ + VG
Sbjct: 117 RAVDLWVNMPAEISKYVAEKGSITVDGISLTVNDLRKNAFKLTIVPHTSAETTIDEFQVG 176
Query: 178 DALNIEVDSQTQVIVNTVERVLK 200
+N+EVD V+ +ER+L+
Sbjct: 177 RRVNLEVD----VLARYMERLLQ 195
>TIGR_CMR|DET_1189 [details] [associations]
symbol:DET_1189 "riboflavin synthase, alpha subunit"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004746
"riboflavin synthase activity" evidence=ISS] [GO:0009231
"riboflavin biosynthetic process" evidence=ISS] InterPro:IPR001783
InterPro:IPR017938 PIRSF:PIRSF000498 GO:GO:0016491 EMBL:CP000027
GenomeReviews:CP000027_GR SUPFAM:SSF63380 GO:GO:0009231
Gene3D:2.40.30.20 InterPro:IPR023366 eggNOG:COG0307 KO:K00793
ProtClustDB:PRK09289 GO:GO:0004746 InterPro:IPR026017
PANTHER:PTHR21098 Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177
OMA:SRYVVEK HOGENOM:HOG000151757 RefSeq:YP_181902.1
ProteinModelPortal:Q3Z797 STRING:Q3Z797 GeneID:3229534
KEGG:det:DET1189 PATRIC:21609413
BioCyc:DETH243164:GJNF-1190-MONOMER Uniprot:Q3Z797
Length = 205
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 64/206 (31%), Positives = 118/206 (57%)
Query: 1 MFTGIVQGIGKVSAVF-SYNDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKIEGNYI 59
MFTGIV+ +G + A +Y + + L+ + + S+A+NGVCL+VT + +
Sbjct: 1 MFTGIVEELGFLKARNPAYLHIGAKLV------LESLKVGDSIAVNGVCLTVTSFDSSSF 54
Query: 60 SFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQAL-EKN 118
D++ ETL+++NL ++ D +NLER+ +N+ +GGH + GH+ A R + ++ + +
Sbjct: 55 HADIMPETLRLSNLGKLSSDSPLNLERALTLNSRMGGHLVQGHVDGTA--RLVSSVPDGS 112
Query: 119 YRMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGD 178
R+ T++ L +Y+ +KG+VA++G+SLTI + F + L+ + + T + GD
Sbjct: 113 ARLLTFETDQDLTRYMVHKGFVAVNGVSLTITDLQAKRFSISLVNLSGKSTNLGLLKPGD 172
Query: 179 ALNIEVDSQTQVIVNTVERVLKENYG 204
+NIE D +I VE++ + G
Sbjct: 173 TVNIETD----IIGKYVEKLCRTERG 194
>TIGR_CMR|APH_0106 [details] [associations]
symbol:APH_0106 "riboflavin synthase, alpha subunit"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0004746
"riboflavin synthase activity" evidence=ISS] [GO:0009231
"riboflavin biosynthetic process" evidence=ISS] InterPro:IPR001783
InterPro:IPR017938 PIRSF:PIRSF000498 GO:GO:0016491 EMBL:CP000235
GenomeReviews:CP000235_GR SUPFAM:SSF63380 GO:GO:0009231
Gene3D:2.40.30.20 InterPro:IPR023366 eggNOG:COG0307 KO:K00793
ProtClustDB:PRK09289 GO:GO:0004746 InterPro:IPR026017
PANTHER:PTHR21098 Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177
OMA:SRYVVEK HOGENOM:HOG000151757 RefSeq:YP_504734.1
ProteinModelPortal:Q2GLL7 STRING:Q2GLL7 GeneID:3930495
KEGG:aph:APH_0106 PATRIC:20948774
BioCyc:APHA212042:GHPM-141-MONOMER Uniprot:Q2GLL7
Length = 203
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 70/207 (33%), Positives = 104/207 (50%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMT-IWFPSD-LLDGISISCSVAINGVCLSVTKIEGNY 58
MF GIV IG+V + D + I S+ L I I S+A +GVCLSV + +
Sbjct: 1 MFNGIVTLIGRVEDIQHDGDTDVIARISVQSEEFLSQIVIGSSIACSGVCLSVVEKGATH 60
Query: 59 ISFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKN 118
++ TL ITNL+ + VNLE + + + GH + GH+ + + +I + +
Sbjct: 61 FVTNISKATLDITNLRFWTLGTKVNLEPALRAGAPLDGHMVQGHVDCIGEIHSITQVAGS 120
Query: 119 YRMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAVGD 178
+ MEI + S KY+ K +A+DG+SLT+ F V+LIP T TT VGD
Sbjct: 121 HVMEI-CCDSSTSKYIAKKSSIALDGVSLTVNSTTPGLFSVNLIPYTWNNTTFQYNTVGD 179
Query: 179 ALNIEVDSQTQVIVNTVERVLKEN-YG 204
+NIE D +I +E +L YG
Sbjct: 180 FVNIETD----LIARYLEALLAHRTYG 202
>TAIR|locus:2051394 [details] [associations]
symbol:AT2G20690 species:3702 "Arabidopsis thaliana"
[GO:0004746 "riboflavin synthase activity" evidence=IEA;IDA]
[GO:0009231 "riboflavin biosynthetic process" evidence=IEA;IDA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR001783 InterPro:IPR017938
GO:GO:0009507 EMBL:CP002685 GO:GO:0016491 SUPFAM:SSF63380
GO:GO:0009231 Gene3D:2.40.30.20 InterPro:IPR023366 EMBL:AC006234
KO:K00793 GO:GO:0004746 InterPro:IPR026017 PANTHER:PTHR21098
Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177 OMA:SRYVVEK
HOGENOM:HOG000151757 UniGene:At.27578 UniGene:At.39657
EMBL:AF361622 EMBL:AY081833 IPI:IPI00523555 PIR:B84592
RefSeq:NP_565482.1 HSSP:Q9Y7P0 ProteinModelPortal:Q9SKU8 SMR:Q9SKU8
STRING:Q9SKU8 PRIDE:Q9SKU8 DNASU:816597 EnsemblPlants:AT2G20690.1
GeneID:816597 KEGG:ath:AT2G20690 TAIR:At2g20690 InParanoid:Q9SKU8
PhylomeDB:Q9SKU8 ProtClustDB:PLN02741
BioCyc:MetaCyc:AT2G20690-MONOMER ArrayExpress:Q9SKU8
Genevestigator:Q9SKU8 Uniprot:Q9SKU8
Length = 271
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 61/202 (30%), Positives = 112/202 (55%)
Query: 1 MFTGIVQGIGKVSAVFSYNDFKSMTIWFPSDL-LDGISISCSVAINGVCLSVTKIEGNYI 59
+FTGIV+ +G+V + D + + + L+ + + S+A+NG CL+VT+
Sbjct: 64 VFTGIVEEMGEVKDL-GMADHGGFDLKIGARVVLEDVKLGDSIAVNGTCLTVTEFNAEEF 122
Query: 60 SFDVINETLKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALEKNY 119
+ + ETL+ T+L+ + VNLER+ + + +GGH + GH+ + +++ +
Sbjct: 123 TVGLAPETLRKTSLEELKKGSPVNLERALQPVSRMGGHVVQGHVDGTGVIESMEVEGDSL 182
Query: 120 RMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVF--EDYFYVHLIPETMEKTTMSKKAVG 177
++++ +K L+KY+ KG+VA+DG SLT+ VF E F +I T + + K +G
Sbjct: 183 WVKVK-ADKGLLKYIVPKGFVAVDGTSLTVVDVFDEESCFNFMMIAYTQQNVVIPTKKIG 241
Query: 178 DALNIEVDSQTQVIVNTVERVL 199
+N+EVD ++ VER+L
Sbjct: 242 QKVNLEVD----IMGKYVERLL 259
>TIGR_CMR|CJE_1353 [details] [associations]
symbol:CJE_1353 "riboflavin synthase, alpha subunit"
species:195099 "Campylobacter jejuni RM1221" [GO:0004746
"riboflavin synthase activity" evidence=ISS] [GO:0009231
"riboflavin biosynthetic process" evidence=ISS] InterPro:IPR001783
InterPro:IPR017938 PIRSF:PIRSF000498 GO:GO:0016491 EMBL:CP000025
GenomeReviews:CP000025_GR SUPFAM:SSF63380 GO:GO:0009231
Gene3D:2.40.30.20 InterPro:IPR023366 eggNOG:COG0307 KO:K00793
ProtClustDB:PRK09289 GO:GO:0004746 InterPro:IPR026017
PANTHER:PTHR21098 Pfam:PF00677 TIGRFAMs:TIGR00187 PROSITE:PS51177
HOGENOM:HOG000151757 RefSeq:YP_179340.1 ProteinModelPortal:Q5HTP5
STRING:Q5HTP5 GeneID:3231859 KEGG:cjr:CJE1353 PATRIC:20044504
OMA:ESSKTHF BioCyc:CJEJ195099:GJC0-1379-MONOMER Uniprot:Q5HTP5
Length = 203
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 64/189 (33%), Positives = 101/189 (53%)
Query: 1 MFTGIVQGIGKVSAVFSY-NDFKSMTIWFPSDLLDGISISCSVAINGVCLSVTKI-EGNY 58
MF G+++ I KV SY N+ S+T +L D S+A+NG CLSVTK+ EG +
Sbjct: 1 MFNGLIREIAKVQ---SYQNNTLSLTAKHRPNLGD------SIAVNGACLSVTKLYEGGF 51
Query: 59 -ISFDVINET-LKITNLKAVAVDQFVNLERSAKMNTEVGGHFLSGHIIDVANVRAIQALE 116
+ + T + I NLK D+ V++E + + + GH + GHI + + IQ E
Sbjct: 52 EVELSRESRTHIAIENLK----DK-VHIEPALRYGDRIDGHLMQGHIDFIGILEKIQKDE 106
Query: 117 KNYRMEIQMTNKSLMKYVFYKGYVAIDGISLTIGKVFEDYFYVHLIPETMEKTTMSKKAV 176
I + K MK++ KG +A+DG+SLTI ++ ++ + +IP T ++T V
Sbjct: 107 NGVDFHITLP-KEAMKFMAEKGSIAVDGVSLTINEILKNGIRLTIIPITFKETLFKDYQV 165
Query: 177 GDALNIEVD 185
G +NIE D
Sbjct: 166 GRKINIESD 174
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 229 229 0.00082 113 3 11 22 0.39 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 583 (62 KB)
Total size of DFA: 161 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.51u 0.06s 19.57t Elapsed: 00:00:19
Total cpu time: 19.51u 0.06s 19.57t Elapsed: 00:00:20
Start: Thu Aug 15 12:50:08 2013 End: Thu Aug 15 12:50:28 2013