BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4643
(207 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1WOV|A Chain A, Crystal Strucure Of Heme Oxygenase-2 From Synechocystis
Sp. Pcc 6803 In Complex With Heme
pdb|1WOV|B Chain B, Crystal Strucure Of Heme Oxygenase-2 From Synechocystis
Sp. Pcc 6803 In Complex With Heme
pdb|1WOW|A Chain A, Crystal Structure Of Heme Oxygenase-2 From Synechocystis
Sp. Pcc 6803 Complexed With Heme In Ferrous Form
pdb|1WOW|B Chain B, Crystal Structure Of Heme Oxygenase-2 From Synechocystis
Sp. Pcc 6803 Complexed With Heme In Ferrous Form
pdb|1WOX|A Chain A, Crystal Structure Of Heme Oxygenase-2 From Synechocystis
Sp. Pcc 6803 In Complex With Heme And No
pdb|1WOX|B Chain B, Crystal Structure Of Heme Oxygenase-2 From Synechocystis
Sp. Pcc 6803 In Complex With Heme And No
Length = 250
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 22 FYEVFKFLESAMEEHKSNQYLQQFNISDMKRTEAFEADLEHYLGPDWKADYKPRPDWKAD 81
Y ++ LE+A+ +H+ N+ + ++ RT+ DL +Y GP+W+ +P P K
Sbjct: 45 LYYLYSALEAALRQHRDNEIISAIYFPELNRTDKLAEDLTYYYGPNWQQIIQPTPCAKI- 103
Query: 82 YKPRESVVNYLNHLEDLKQTNDTLLIAYVYHMYLGVLSGGQII-NKKRQLSLMKSNYQDQ 140
Y++ L+ + + LLIA+ Y YLG LSGGQ + N R +
Sbjct: 104 ---------YVDRLKTIAASEPELLIAHCYTRYLGDLSGGQSLKNIIRSALQLPEGEGTA 154
Query: 141 VLSFDPSVNVGQLKRQIKSILDD--ESTQFSRQTREQLLAESRKVFLLNNSII 191
+ FD G +RQ K I D S T +++ E+ F LN ++
Sbjct: 155 MYEFDSLPTPGD-RRQFKEIYRDVLNSLPLDEATINRIVEEANYAFSLNREVM 206
>pdb|1DVG|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Heme; Seleleno-Methionine Derivative, Mutated At
M51t,M93l, M155l,M191l.
pdb|1DVG|B Chain B, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Heme; Seleleno-Methionine Derivative, Mutated At
M51t,M93l, M155l,M191l
Length = 267
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 22 FYEVFKFLESAMEEHKSNQ-YLQQFNISDMKRTEAFEADLEHYLGPDWKADYKPRPDWKA 80
Y ++ LE +E +K N Y + ++ R A E DL + GP W+
Sbjct: 54 LYHIYTALEEEIERNKQNPVYAPLYFPEELHRRAALEQDLAFWYGPHWQE--------AI 105
Query: 81 DYKPRESVVNYLNHLEDLKQTNDTLLIAYVYHMYLGVLSGGQIINKKRQLSLMKSNYQDQ 140
Y P + +Y+ L ++ T+ LL+A+ Y YLG LSGGQ++ K Q +L + +
Sbjct: 106 PYTP--ATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQKALALPSSGEG 163
Query: 141 VLSFD-PSV-NVGQLKRQIKSILDDESTQFSRQTREQLLAESRKVFLLN 187
+ SF PS+ N + K+ ++ + + + + + + ++ E++ FLLN
Sbjct: 164 LASFTFPSIDNPTKFKQLYRARXN--TLELTPEVKHRVTEEAKTAFLLN 210
>pdb|1OYK|A Chain A, Crystal Structures Of The Ferric, Ferrous, And Ferrous-No
Forms Of The Asp140ala Mutant Of Human Heme Oxygenase-1:
Catalytic Implications
pdb|1OYK|B Chain B, Crystal Structures Of The Ferric, Ferrous, And Ferrous-No
Forms Of The Asp140ala Mutant Of Human Heme Oxygenase-1:
Catalytic Implications
pdb|1OYL|A Chain A, Crystal Structures Of The Ferric, Ferrous, And Ferrous-No
Forms Of The Asp140ala Mutant Of Human Heme Oxygenase-1:
Catalytic Implications
pdb|1OYL|B Chain B, Crystal Structures Of The Ferric, Ferrous, And Ferrous-No
Forms Of The Asp140ala Mutant Of Human Heme Oxygenase-1:
Catalytic Implications
pdb|1OZE|A Chain A, Crystal Structures Of The Ferric, Ferrous, And Ferrous-No
Forms Of The Asp140ala Mutant Of Human Heme Oxygenase-
1:catalytic Implications
pdb|1OZE|B Chain B, Crystal Structures Of The Ferric, Ferrous, And Ferrous-No
Forms Of The Asp140ala Mutant Of Human Heme Oxygenase-
1:catalytic Implications
pdb|1OZL|A Chain A, Crystal Structures Of The Ferric, Ferrous, And Ferrous-No
Forms Of The Asp140ala Mutant Of Human Heme Oxygenase-1:
Catalytic Implications
pdb|1OZL|B Chain B, Crystal Structures Of The Ferric, Ferrous, And Ferrous-No
Forms Of The Asp140ala Mutant Of Human Heme Oxygenase-1:
Catalytic Implications
Length = 233
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 22 FYEVFKFLESAMEEHK-SNQYLQQFNISDMKRTEAFEADLEHYLGPDWKADYKPRPDWKA 80
Y ++ LE +E +K S + + ++ R A E DL + GP W+ + P
Sbjct: 54 LYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQ-EVIP------ 106
Query: 81 DYKPRESVVNYLNHLEDLKQTNDTLLIAYVYHMYLGVLSGGQIINK--KRQLSLMKSNYQ 138
Y P ++ Y+ L ++ +T LL+A+ Y YLG LSGGQ++ K ++ L L S
Sbjct: 107 -YTP--AMQRYVKRLHEVGRTEPELLVAHAYTRYLGALSGGQVLKKIAQKALDLPSSGEG 163
Query: 139 DQVLSFDPSVNVGQLKRQIKSILDDESTQFSRQTREQLLAESRKVFLLN 187
+F + + K+ +S ++ S + + R++++ E++ FLLN
Sbjct: 164 LAFFTFPNIASATKFKQLYRSRMN--SLEMTPAVRQRVIEEAKTAFLLN 210
>pdb|1NI6|A Chain A, Comparisions Of The Heme-free And-bound Crystal Structures
Of Human Heme Oxygenase-1
pdb|1NI6|B Chain B, Comparisions Of The Heme-free And-bound Crystal Structures
Of Human Heme Oxygenase-1
pdb|1NI6|C Chain C, Comparisions Of The Heme-free And-bound Crystal Structures
Of Human Heme Oxygenase-1
pdb|1NI6|D Chain D, Comparisions Of The Heme-free And-bound Crystal Structures
Of Human Heme Oxygenase-1
Length = 224
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 22 FYEVFKFLESAMEEHK-SNQYLQQFNISDMKRTEAFEADLEHYLGPDWKADYKPRPDWKA 80
Y ++ LE +E +K S + + ++ R A E DL + GP W+ + P
Sbjct: 54 LYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQ-EVIP------ 106
Query: 81 DYKPRESVVNYLNHLEDLKQTNDTLLIAYVYHMYLGVLSGGQIINK--KRQLSLMKSNYQ 138
Y P ++ Y+ L ++ +T LL+A+ Y YLG LSGGQ++ K ++ L L S
Sbjct: 107 -YTP--AMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPSSGEG 163
Query: 139 DQVLSFDPSVNVGQLKRQIKSILDDESTQFSRQTREQLLAESRKVFLLN 187
+F + + K+ +S ++ S + + R++++ E++ FLLN
Sbjct: 164 LAFFTFPNIASATKFKQLYRSRMN--SLEMTPAVRQRVIEEAKTAFLLN 210
>pdb|1N3U|A Chain A, Crystal Structure Of Human Heme Oxygenase 1 (Ho-1) In
Complex With Its Substrate Heme, Crystal Form B
pdb|1N3U|B Chain B, Crystal Structure Of Human Heme Oxygenase 1 (Ho-1) In
Complex With Its Substrate Heme, Crystal Form B
pdb|1N45|A Chain A, X-Ray Crystal Structure Of Human Heme Oxygenase-1 (Ho-1)
In Complex With Its Substrate Heme
pdb|1N45|B Chain B, X-Ray Crystal Structure Of Human Heme Oxygenase-1 (Ho-1)
In Complex With Its Substrate Heme
pdb|1OZR|A Chain A, Crystal Structures Of The Ferric, Ferrous And Ferrous-No
Forms Of The Asp140ala Mutant Of Human Heme Oxygenase-1:
Catalytic Implications
pdb|1OZR|B Chain B, Crystal Structures Of The Ferric, Ferrous And Ferrous-No
Forms Of The Asp140ala Mutant Of Human Heme Oxygenase-1:
Catalytic Implications
pdb|1OZW|A Chain A, Crystal Structures Of The Ferric, Ferrous And Ferrous-No
Forms Of The Asp140ala Mutant Of Human Heme Oxygenase-1:
Catalytic Implications
pdb|1OZW|B Chain B, Crystal Structures Of The Ferric, Ferrous And Ferrous-No
Forms Of The Asp140ala Mutant Of Human Heme Oxygenase-1:
Catalytic Implications
pdb|1S8C|A Chain A, Crystal Structure Of Human Heme Oxygenase In A Complex
With Biliverdine
pdb|1S8C|B Chain B, Crystal Structure Of Human Heme Oxygenase In A Complex
With Biliverdine
pdb|1S8C|C Chain C, Crystal Structure Of Human Heme Oxygenase In A Complex
With Biliverdine
pdb|1S8C|D Chain D, Crystal Structure Of Human Heme Oxygenase In A Complex
With Biliverdine
pdb|1S13|A Chain A, Human Heme Oxygenase Oxidatition Of Alpha- And Gamma-Meso-
Phenylhemes
pdb|1S13|B Chain B, Human Heme Oxygenase Oxidatition Of Alpha- And Gamma-Meso-
Phenylhemes
pdb|1T5P|A Chain A, Human Heme Oxygenase Oxidation Of Alpha- And Gamma-Meso-
Phenylhemes
pdb|1T5P|B Chain B, Human Heme Oxygenase Oxidation Of Alpha- And Gamma-Meso-
Phenylhemes
pdb|1TWN|A Chain A, Crystal Structures Of Ferrous And Ferrous-No Forms Of
Verdoheme In A Complex With Human Heme Oxygenase-1:
Catalytic Implications For Heme Cleavage
pdb|1TWN|B Chain B, Crystal Structures Of Ferrous And Ferrous-No Forms Of
Verdoheme In A Complex With Human Heme Oxygenase-1:
Catalytic Implications For Heme Cleavage
pdb|1TWR|A Chain A, Crystal Structures Of Ferrous And Ferrous-No Forms Of
Verdoheme In A Complex With Human Heme Oxygenase-1:
Catalytic Implications For Heme Cleavage
pdb|1TWR|B Chain B, Crystal Structures Of Ferrous And Ferrous-No Forms Of
Verdoheme In A Complex With Human Heme Oxygenase-1:
Catalytic Implications For Heme Cleavage
pdb|3CZY|A Chain A, Crystal Structure Of Human Heme Oxygenase-1 In Complex
With 1-(Adamantan-1-Yl)-2-(1h-Imidazol-1-Yl)ethanone
pdb|3CZY|B Chain B, Crystal Structure Of Human Heme Oxygenase-1 In Complex
With 1-(Adamantan-1-Yl)-2-(1h-Imidazol-1-Yl)ethanone
pdb|3HOK|A Chain A, X-Ray Crystal Structure Of Human Heme Oxygenase-1 With
(2r,
4s)-2-[2-(4-Chlorophenyl)ethyl]-2-[(1h-Imidazol-1-Yl)
Methyl]-4[((5-Trifluoromethylpyridin-2-Yl)thio)methyl]-
1,3- Dioxolane: A Novel, Inducible Binding Mode
pdb|3HOK|B Chain B, X-Ray Crystal Structure Of Human Heme Oxygenase-1 With
(2r,
4s)-2-[2-(4-Chlorophenyl)ethyl]-2-[(1h-Imidazol-1-Yl)
Methyl]-4[((5-Trifluoromethylpyridin-2-Yl)thio)methyl]-
1,3- Dioxolane: A Novel, Inducible Binding Mode
pdb|3K4F|A Chain A, X-Ray Crystal Structure Of Human Heme Oxygenase-1 In
Complex With
4-Phenyl-1-(1h-1,2,4-Triazol-1-Yl)-2-Butanone
pdb|3K4F|B Chain B, X-Ray Crystal Structure Of Human Heme Oxygenase-1 In
Complex With
4-Phenyl-1-(1h-1,2,4-Triazol-1-Yl)-2-Butanone
pdb|3TGM|A Chain A, X-Ray Crystal Structure Of Human Heme Oxygenase-1 In
Complex With 1- (1h-Imidazol-1-Yl)-4,4-Diphenyl-2
Butanone
pdb|3TGM|B Chain B, X-Ray Crystal Structure Of Human Heme Oxygenase-1 In
Complex With 1- (1h-Imidazol-1-Yl)-4,4-Diphenyl-2
Butanone
Length = 233
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 22 FYEVFKFLESAMEEHK-SNQYLQQFNISDMKRTEAFEADLEHYLGPDWKADYKPRPDWKA 80
Y ++ LE +E +K S + + ++ R A E DL + GP W+ + P
Sbjct: 54 LYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQ-EVIP------ 106
Query: 81 DYKPRESVVNYLNHLEDLKQTNDTLLIAYVYHMYLGVLSGGQIINK--KRQLSLMKSNYQ 138
Y P ++ Y+ L ++ +T LL+A+ Y YLG LSGGQ++ K ++ L L S
Sbjct: 107 -YTP--AMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPSSGEG 163
Query: 139 DQVLSFDPSVNVGQLKRQIKSILDDESTQFSRQTREQLLAESRKVFLLN 187
+F + + K+ +S ++ S + + R++++ E++ FLLN
Sbjct: 164 LAFFTFPNIASATKFKQLYRSRMN--SLEMTPAVRQRVIEEAKTAFLLN 210
>pdb|1DVE|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Heme
pdb|1IRM|A Chain A, Crystal Structure Of Apo Heme Oxygenase-1
pdb|1IRM|B Chain B, Crystal Structure Of Apo Heme Oxygenase-1
pdb|1IRM|C Chain C, Crystal Structure Of Apo Heme Oxygenase-1
pdb|1IVJ|A Chain A, Crystal Structure Of Rat Hemeoxygenase-1 In Complex With
Heme And Azide.
pdb|1IX3|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Heme Bound To Cyanide
pdb|1IX4|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Heme Bound To Carbon Monoxide
pdb|1J02|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1-heme Bound To No
pdb|1J2C|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Biliverdin Ixalpha-Iron Cluster
pdb|1UBB|A Chain A, Crystal Structure Of Rat Ho-1 In Complex With Ferrous Heme
pdb|1ULX|A Chain A, Partially Photolyzed Structure Of Co-bound Heme-heme
Oxygenase Complex
pdb|1VGI|A Chain A, Crystal Structure Of Xenon Bound Rat Heme-heme Oxygenase-1
Complex
pdb|2DY5|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Heme And
2-[2-(4-Chlorophenyl)ethyl]-2-[(1h-Imidazol-1-Yl)
Methyl]-1,3-Dioxolane
pdb|2E7E|A Chain A, Bent-Binding Of Cyanide To The Heme Iron In Rat Heme
Oxygenase-1
pdb|2ZVU|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Ferrous Verdoheme
pdb|4G7L|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Heme And O2
pdb|4G7P|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And Co With 1 Hr
Illumination At 100 K: Laser Off
pdb|4G7T|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And Co With 1 Hr
Illumination: Laser On
pdb|4G7U|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And Co With 16
Hr Illumination: Laser Off
pdb|4G8P|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And Co With 16
Hr Illumination: Laser On
pdb|4G8U|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And O2 With 13
Hr Illumination: Laser Off
pdb|4G8W|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And O2 With 13
Hr Illumination: Laser On
pdb|4G98|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And Co At 100k
pdb|4G99|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And Co At 100 K
After Warming To 160 K
Length = 267
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 16/190 (8%)
Query: 1 MVDFGSGAMSDTSIWIEGLLVFYEVFKFLESAMEEHKSNQ-YLQQFNISDMKRTEAFEAD 59
M +F G +S + + Y ++ LE +E +K N Y + ++ R A E D
Sbjct: 34 MRNFQKGQVSREGFKL-VMASLYHIYTALEEEIERNKQNPVYAPLYFPEELHRRAALEQD 92
Query: 60 LEHYLGPDWKADYKPRPDWKADYKPRESVVNYLNHLEDLKQTNDTLLIAYVYHMYLGVLS 119
+ + GP W+ Y P + +Y+ L ++ T+ LL+A+ Y YLG LS
Sbjct: 93 MAFWYGPHWQE--------AIPYTP--ATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLS 142
Query: 120 GGQIINKKRQLSLMKSNYQDQVLSFD-PSV-NVGQLKRQIKSILDDESTQFSRQTREQLL 177
GGQ++ K Q ++ + + + F PS+ N + K+ ++ ++ + + + + + ++
Sbjct: 143 GGQVLKKIAQKAMALPSSGEGLAFFTFPSIDNPTKFKQLYRARMN--TLEMTPEVKHRVT 200
Query: 178 AESRKVFLLN 187
E++ FLLN
Sbjct: 201 EEAKTAFLLN 210
>pdb|3I9T|A Chain A, Crystal Structure Of The Rat Heme Oxygenase (Ho-1) In
Comple Heme Binding Dithiothreitol (Dtt)
pdb|3I9U|A Chain A, Crystal Structure Of The Rat Heme Oxygenase (Ho-1) In
Comple Heme Binding Dithioerythritol (Dte)
Length = 263
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 16/190 (8%)
Query: 1 MVDFGSGAMSDTSIWIEGLLVFYEVFKFLESAMEEHKSNQ-YLQQFNISDMKRTEAFEAD 59
M +F G +S + + Y ++ LE +E +K N Y + ++ R A E D
Sbjct: 34 MRNFQKGQVSREGFKL-VMASLYHIYTALEEEIERNKQNPVYAPLYFPEELHRRAALEQD 92
Query: 60 LEHYLGPDWKADYKPRPDWKADYKPRESVVNYLNHLEDLKQTNDTLLIAYVYHMYLGVLS 119
+ + GP W+ Y P + +Y+ L ++ T+ LL+A+ Y YLG LS
Sbjct: 93 MAFWYGPHWQE--------AIPYTP--ATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLS 142
Query: 120 GGQIINKKRQLSLMKSNYQDQVLSFD-PSV-NVGQLKRQIKSILDDESTQFSRQTREQLL 177
GGQ++ K Q ++ + + + F PS+ N + K+ ++ ++ + + + + + ++
Sbjct: 143 GGQVLKKIAQKAMALPSSGEGLAFFTFPSIDNPTKFKQLYRARMN--TLEMTPEVKHRVT 200
Query: 178 AESRKVFLLN 187
E++ FLLN
Sbjct: 201 EEAKTAFLLN 210
>pdb|1XK2|A Chain A, Nadph- And Ascorbate-Supported Heme Oxygenase Reactions
Are Distinct. Regiospecificity Of Heme Cleavage By The
R183e Mutant
pdb|1XK2|B Chain B, Nadph- And Ascorbate-Supported Heme Oxygenase Reactions
Are Distinct. Regiospecificity Of Heme Cleavage By The
R183e Mutant
pdb|1XK3|A Chain A, Nadph- And Ascorbate-Supported Heme Oxygenase Reactions
Are Distinct. Regiospecificity Of Heme Cleavage By The
R183e Mutant
pdb|1XK3|B Chain B, Nadph- And Ascorbate-Supported Heme Oxygenase Reactions
Are Distinct. Regiospecificity Of Heme Cleavage By The
R183e Mutant
Length = 233
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 22 FYEVFKFLESAMEEHK-SNQYLQQFNISDMKRTEAFEADLEHYLGPDWKADYKPRPDWKA 80
Y ++ LE +E +K S + + ++ R A E DL + GP W+ + P
Sbjct: 54 LYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQ-EVIP------ 106
Query: 81 DYKPRESVVNYLNHLEDLKQTNDTLLIAYVYHMYLGVLSGGQIINK--KRQLSLMKSNYQ 138
Y P ++ Y+ L ++ +T LL+A+ Y YLG LSGGQ++ K ++ L L S
Sbjct: 107 -YTP--AMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPSSGEG 163
Query: 139 DQVLSFDPSVNVGQLKRQIKSILDDESTQFSRQTREQLLAESRKVFLLN 187
+F + + K+ +S ++ S + + R++++ E++ FLLN
Sbjct: 164 LAFFTFPNIASATKFKQLYESRMN--SLEMTPAVRQRVIEEAKTAFLLN 210
>pdb|1XJZ|A Chain A, Crystal Structures Of The G139a, G139a-No And G143h
Mutants Of Human Heme Oxygenase-1
pdb|1XJZ|B Chain B, Crystal Structures Of The G139a, G139a-No And G143h
Mutants Of Human Heme Oxygenase-1
Length = 233
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 22 FYEVFKFLESAMEEHK-SNQYLQQFNISDMKRTEAFEADLEHYLGPDWKADYKPRPDWKA 80
Y ++ LE +E +K S + + ++ R A E DL + GP W+ + P
Sbjct: 54 LYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQ-EVIP------ 106
Query: 81 DYKPRESVVNYLNHLEDLKQTNDTLLIAYVYHMYLGVLSGGQIINK--KRQLSLMKSNYQ 138
Y P ++ Y+ L ++ +T LL+A+ Y YL LSGGQ++ K ++ L L S
Sbjct: 107 -YTP--AMQRYVKRLHEVGRTEPELLVAHAYTRYLADLSGGQVLKKIAQKALDLPSSGEG 163
Query: 139 DQVLSFDPSVNVGQLKRQIKSILDDESTQFSRQTREQLLAESRKVFLLN 187
+F + + K+ +S ++ S + + R++++ E++ FLLN
Sbjct: 164 LAFFTFPNIASATKFKQLYRSRMN--SLEMTPAVRQRVIEEAKTAFLLN 210
>pdb|1XK0|A Chain A, Crystal Structures Of The G139a, G139a-No And G143h
Mutants Of Human Heme Oxygenase-1
pdb|1XK0|B Chain B, Crystal Structures Of The G139a, G139a-No And G143h
Mutants Of Human Heme Oxygenase-1
Length = 233
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 22 FYEVFKFLESAMEEHK-SNQYLQQFNISDMKRTEAFEADLEHYLGPDWKADYKPRPDWKA 80
Y ++ LE +E +K S + + ++ R A E DL + GP W+ + P
Sbjct: 54 LYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQ-EVIP------ 106
Query: 81 DYKPRESVVNYLNHLEDLKQTNDTLLIAYVYHMYLGVLSGGQIINK--KRQLSLMKSNYQ 138
Y P ++ Y+ L ++ +T LL+A+ Y YL LSGGQ++ K ++ L L S
Sbjct: 107 -YTP--AMQRYVKRLHEVGRTEPELLVAHAYTRYLADLSGGQVLKKIAQKALDLPSSGEG 163
Query: 139 DQVLSFDPSVNVGQLKRQIKSILDDESTQFSRQTREQLLAESRKVFLLN 187
+F + + K+ +S ++ S + + R++++ E++ FLLN
Sbjct: 164 LAFFTFPNIASATKFKQLYESRMN--SLEMTPAVRQRVIEEAKTAFLLN 210
>pdb|1XK1|A Chain A, Crystal Structures Of The G139a, G139a-No And G143h
Mutants Of Human Heme Oxygenase-1
pdb|1XK1|B Chain B, Crystal Structures Of The G139a, G139a-No And G143h
Mutants Of Human Heme Oxygenase-1
Length = 233
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 22 FYEVFKFLESAMEEHK-SNQYLQQFNISDMKRTEAFEADLEHYLGPDWKA--DYKPRPDW 78
Y ++ LE +E +K S + + ++ R A E DL + GP W+ Y P
Sbjct: 54 LYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTP---- 109
Query: 79 KADYKPRESVVNYLNHLEDLKQTNDTLLIAYVYHMYLGVLSGGQIINK--KRQLSLMKSN 136
++ Y+ L ++ +T LL+A+ Y YLG LS GQ++ K ++ L L S
Sbjct: 110 --------AMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLSHGQVLKKIAQKALDLPSSG 161
Query: 137 YQDQVLSFDPSVNVGQLKRQIKSILDDESTQFSRQTREQLLAESRKVFLLN 187
+F + + K+ +S ++ S + + R++++ E++ FLLN
Sbjct: 162 EGLAFFTFPNIASATKFKQLYESRMN--SLEMTPAVRQRVIEEAKTAFLLN 210
>pdb|2Q32|A Chain A, Crystal Structure Of Human Heme Oxygenase-2 C127a (Ho-2)
pdb|2Q32|B Chain B, Crystal Structure Of Human Heme Oxygenase-2 C127a (Ho-2)
pdb|2QPP|A Chain A, Crystal Structure Of Human Heme Oxygenase-2 C127a (Ho-2)
With Bound Heme
pdb|2QPP|B Chain B, Crystal Structure Of Human Heme Oxygenase-2 C127a (Ho-2)
With Bound Heme
pdb|2RGZ|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Human Heme Oxygenase-2 C127a (Ho-2) With Bound Heme
pdb|2RGZ|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of
Human Heme Oxygenase-2 C127a (Ho-2) With Bound Heme
Length = 264
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 21 VFYEVFKFLESAMEEHKSNQYLQQFNIS-DMKRTEAFEADLEHYLGPDWKADYKPRPDWK 79
Y + LE ME +K + ++ R EA D+E++ G +W+ +
Sbjct: 73 ALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQA----- 127
Query: 80 ADYKPRESVVNYLNHLEDLKQTNDTLLIAYVYHMYLGVLSGGQIINK--KRQLSLMKSNY 137
P+ + Y+ + + Q LL+A+ Y Y+G LSGGQ++ K +R L L +
Sbjct: 128 ----PK-AAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTGE 182
Query: 138 QDQVLSFDPSVNVGQLKRQIKSILDDESTQFSRQTREQLLAESRKVFLLNNSII 191
Q F+ N Q K+ ++ ++ + + +T+E+++ E+ K F N I
Sbjct: 183 GTQFYLFENVDNAQQFKQLYRARMN--ALDLNMKTKERIVEEANKAFEYNMQIF 234
>pdb|1WE1|A Chain A, Crystal Structure Of Heme Oxygenase-1 From Cyanobacterium
Synechocystis Sp. Pcc6803 In Complex With Heme
pdb|1WE1|B Chain B, Crystal Structure Of Heme Oxygenase-1 From Cyanobacterium
Synechocystis Sp. Pcc6803 In Complex With Heme
pdb|1WE1|C Chain C, Crystal Structure Of Heme Oxygenase-1 From Cyanobacterium
Synechocystis Sp. Pcc6803 In Complex With Heme
pdb|1WE1|D Chain D, Crystal Structure Of Heme Oxygenase-1 From Cyanobacterium
Synechocystis Sp. Pcc6803 In Complex With Heme
Length = 240
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 18/169 (10%)
Query: 22 FYEVFKFLESAMEEHKSNQYLQQFNISDMKRTEAFEADLEHYLGPDWKADYKPRPDWKAD 81
Y V+ +E M + K + L ++ R ++ E DL+ Y G +W+ + K +A
Sbjct: 46 LYFVYSAMEEEMAKFKDHPILSHIYFPELNRKQSLEQDLQFYYGSNWRQEVKISAAGQA- 104
Query: 82 YKPRESVVNYLNHLEDLKQTNDTLLIAYVYHMYLGVLSGGQIINKKRQLSLMKSNYQDQV 141
Y++ + + T LL+A+ Y YLG LSGGQI+ K Q ++ N D
Sbjct: 105 ---------YVDRVRQVAATAPELLVAHSYTRYLGDLSGGQILKKIAQNAM---NLHDGG 152
Query: 142 LSFDPSVNV---GQLKRQIKSILDDESTQFSRQTREQLLAESRKVFLLN 187
+F ++ K + ++D + T E+++ E+ F +N
Sbjct: 153 TAFYEFADIDDEKAFKNTYRQAMND--LPIDQATAERIVDEANDAFAMN 199
>pdb|1WNV|A Chain A, D136a Mutant Of Heme Oxygenase From Corynebacterium
Diphtheriae (Hmuo)
pdb|1WNV|B Chain B, D136a Mutant Of Heme Oxygenase From Corynebacterium
Diphtheriae (Hmuo)
pdb|1WNV|C Chain C, D136a Mutant Of Heme Oxygenase From Corynebacterium
Diphtheriae (Hmuo)
Length = 215
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 26 FKFLESAMEEHKSNQYLQQFNISDMKRTEAFEADLEHYLGPDWKADYKPRPDWKADYKPR 85
+ LE A++ +++ + + + R E DL+ G +W++
Sbjct: 53 YTALEQAVDAVRASGFAESLLDPALNRAEVLARDLDKLNGS---------SEWRSRITAS 103
Query: 86 ESVVNYLNHLEDLKQTNDT-LLIAYVYHMYLGVLSGGQIINKKRQLSLMKSNY--QDQVL 142
+V++Y+N LE+++ D L+A+ Y YLG LSGGQ+I + +M+ +Y + L
Sbjct: 104 PAVIDYVNRLEEIRDNVDGPALVAHHYVRYLGALSGGQVIAR-----MMQRHYGVDPEAL 158
Query: 143 SFDPSVNVGQLKRQIKSILDDE------STQFSRQTREQLLAESRKVFLLNNSI 190
F + +LK + DE + + S + RE LL E+ F+ N+ +
Sbjct: 159 GFYHFEGIAKLK-----VYKDEYREKLNNLELSDEQREHLLKEATDAFVFNHQV 207
>pdb|1WNX|A Chain A, D136e Mutant Of Heme Oxygenase From Corynebacterium
Diphtheriae (Hmuo)
pdb|1WNX|B Chain B, D136e Mutant Of Heme Oxygenase From Corynebacterium
Diphtheriae (Hmuo)
Length = 215
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 26 FKFLESAMEEHKSNQYLQQFNISDMKRTEAFEADLEHYLGPDWKADYKPRPDWKADYKPR 85
+ LE A++ +++ + + + R E DL+ G +W++
Sbjct: 53 YTALEQAVDAVRASGFAESLLDPALNRAEVLARDLDKLNGS---------SEWRSRITAS 103
Query: 86 ESVVNYLNHLEDLKQTNDT-LLIAYVYHMYLGVLSGGQIINKKRQLSLMKSNY--QDQVL 142
+V++Y+N LE+++ D L+A+ Y YLG LSGGQ+I + +M+ +Y + L
Sbjct: 104 PAVIDYVNRLEEIRDNVDGPALVAHHYVRYLGELSGGQVIAR-----MMQRHYGVDPEAL 158
Query: 143 SFDPSVNVGQLKRQIKSILDDE------STQFSRQTREQLLAESRKVFLLNNSI 190
F + +LK + DE + + S + RE LL E+ F+ N+ +
Sbjct: 159 GFYHFEGIAKLK-----VYKDEYREKLNNLELSDEQREHLLKEATDAFVFNHQV 207
>pdb|1WNW|A Chain A, D136n Mutant Of Heme Oxygenase From Corynebacterium
Diphtheriae (hmuo)
pdb|1WNW|B Chain B, D136n Mutant Of Heme Oxygenase From Corynebacterium
Diphtheriae (hmuo)
pdb|1WNW|C Chain C, D136n Mutant Of Heme Oxygenase From Corynebacterium
Diphtheriae (hmuo)
Length = 215
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 26 FKFLESAMEEHKSNQYLQQFNISDMKRTEAFEADLEHYLGPDWKADYKPRPDWKADYKPR 85
+ LE A++ +++ + + + R E DL+ G +W++
Sbjct: 53 YTALEQAVDAVRASGFAESLLDPALNRAEVLARDLDKLNGS---------SEWRSRITAS 103
Query: 86 ESVVNYLNHLEDLKQTNDT-LLIAYVYHMYLGVLSGGQIINKKRQLSLMKSNY--QDQVL 142
+V++Y+N LE+++ D L+A+ Y YLG LSGGQ+I + +M+ +Y + L
Sbjct: 104 PAVIDYVNRLEEIRDNVDGPALVAHHYVRYLGNLSGGQVIAR-----MMQRHYGVDPEAL 158
Query: 143 SFDPSVNVGQLKRQIKSILDDE------STQFSRQTREQLLAESRKVFLLNNSI 190
F + +LK + DE + + S + RE LL E+ F+ N+ +
Sbjct: 159 GFYHFEGIAKLK-----VYKDEYREKLNNLELSDEQREHLLKEATDAFVFNHQV 207
>pdb|1IW0|A Chain A, Crystal Structure Of A Heme Oxygenase (Hmuo) From
Corynebacterium Diphtheriae Complexed With Heme In The
Ferric State
pdb|1IW0|B Chain B, Crystal Structure Of A Heme Oxygenase (Hmuo) From
Corynebacterium Diphtheriae Complexed With Heme In The
Ferric State
pdb|1IW0|C Chain C, Crystal Structure Of A Heme Oxygenase (Hmuo) From
Corynebacterium Diphtheriae Complexed With Heme In The
Ferric State
pdb|1IW1|A Chain A, Crystal Structure Of A Heme Oxygenase (Hmuo) From
Corynebacterium Diphtheriae Complexed With Heme In The
Ferrous State
pdb|1IW1|B Chain B, Crystal Structure Of A Heme Oxygenase (Hmuo) From
Corynebacterium Diphtheriae Complexed With Heme In The
Ferrous State
pdb|1IW1|C Chain C, Crystal Structure Of A Heme Oxygenase (Hmuo) From
Corynebacterium Diphtheriae Complexed With Heme In The
Ferrous State
pdb|1V8X|A Chain A, Crystal Structure Of The Dioxygen-Bound Heme Oxygenase
From Corynebacterium Diphtheriae
pdb|1V8X|B Chain B, Crystal Structure Of The Dioxygen-Bound Heme Oxygenase
From Corynebacterium Diphtheriae
pdb|1V8X|C Chain C, Crystal Structure Of The Dioxygen-Bound Heme Oxygenase
From Corynebacterium Diphtheriae
pdb|1WZD|A Chain A, Crystal Structure Of An Artificial Metalloprotein:
Fe(10-Ch2ch2cooh- Salophen)WILD TYPE HEME OXYGENASE
pdb|1WZD|B Chain B, Crystal Structure Of An Artificial Metalloprotein:
Fe(10-Ch2ch2cooh- Salophen)WILD TYPE HEME OXYGENASE
pdb|1WZF|A Chain A, Crystal Structure Of An Artificial Metalloprotein:
Fe(10-Cooh- Salophen)WILD TYPE HEME OXYGENASE
pdb|1WZF|B Chain B, Crystal Structure Of An Artificial Metalloprotein:
Fe(10-Cooh- Salophen)WILD TYPE HEME OXYGENASE
pdb|1WZG|A Chain A, Crystal Structure Of An Artificial Metalloprotein:
Fe(Salophen)WILD Type Heme Oxygenase
pdb|1WZG|B Chain B, Crystal Structure Of An Artificial Metalloprotein:
Fe(Salophen)WILD Type Heme Oxygenase
pdb|2Z68|A Chain A, Crystal Structure Of An Artificial Metalloprotein: Cr[n-
Salicylidene-4-Amino-3-Hydroxyhydrocinnamic Acid]WILD
Type Heme Oxygenase
pdb|2Z68|B Chain B, Crystal Structure Of An Artificial Metalloprotein: Cr[n-
Salicylidene-4-Amino-3-Hydroxyhydrocinnamic Acid]WILD
Type Heme Oxygenase
pdb|3I8R|A Chain A, Crystal Structure Of The Heme Oxygenase From
Corynebacterium Diphtheriae (Hmuo) In Complex With Heme
Binding Ditiothreit
pdb|3I8R|B Chain B, Crystal Structure Of The Heme Oxygenase From
Corynebacterium Diphtheriae (Hmuo) In Complex With Heme
Binding Ditiothreit
pdb|3I8R|C Chain C, Crystal Structure Of The Heme Oxygenase From
Corynebacterium Diphtheriae (Hmuo) In Complex With Heme
Binding Ditiothreit
pdb|3MOO|A Chain A, Crystal Structure Of The Hmuo, Heme Oxygenase From
Corynebacterium Diphtheriae, In Complex With Azide-Bound
Verdoheme
pdb|3MOO|B Chain B, Crystal Structure Of The Hmuo, Heme Oxygenase From
Corynebacterium Diphtheriae, In Complex With Azide-Bound
Verdoheme
Length = 215
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 26 FKFLESAMEEHKSNQYLQQFNISDMKRTEAFEADLEHYLGPDWKADYKPRPDWKADYKPR 85
+ LE A++ +++ + + + R E DL+ G +W++
Sbjct: 53 YTALEQAVDAVRASGFAESLLDPALNRAEVLARDLDKLNGS---------SEWRSRITAS 103
Query: 86 ESVVNYLNHLEDLKQTNDT-LLIAYVYHMYLGVLSGGQIINKKRQLSLMKSNY--QDQVL 142
+V++Y+N LE+++ D L+A+ Y YLG LSGGQ+I + +M+ +Y + L
Sbjct: 104 PAVIDYVNRLEEIRDNVDGPALVAHHYVRYLGDLSGGQVIAR-----MMQRHYGVDPEAL 158
Query: 143 SFDPSVNVGQLKRQIKSILDDE------STQFSRQTREQLLAESRKVFLLNNSI 190
F + +LK + DE + + S + RE LL E+ F+ N+ +
Sbjct: 159 GFYHFEGIAKLK-----VYKDEYREKLNNLELSDEQREHLLKEATDAFVFNHQV 207
>pdb|1ELW|A Chain A, Crystal Structure Of The Tpr1 Domain Of Hop In Complex
With A Hsc70 Peptide
pdb|1ELW|B Chain B, Crystal Structure Of The Tpr1 Domain Of Hop In Complex
With A Hsc70 Peptide
Length = 118
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 75 RPDWKADYKPRESVVNYLNHLEDLKQT 101
+PDW Y + + + +LN E+ K+T
Sbjct: 68 KPDWGKGYSRKAAALEFLNRFEEAKRT 94
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,762,903
Number of Sequences: 62578
Number of extensions: 225906
Number of successful extensions: 643
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 607
Number of HSP's gapped (non-prelim): 21
length of query: 207
length of database: 14,973,337
effective HSP length: 94
effective length of query: 113
effective length of database: 9,091,005
effective search space: 1027283565
effective search space used: 1027283565
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)