Query psy4644
Match_columns 351
No_of_seqs 274 out of 1485
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 22:04:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4644.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4644hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v7d_A Suppressor of kinetocho 100.0 2.2E-50 7.6E-55 348.1 16.6 161 190-351 6-169 (169)
2 3v7d_A Suppressor of kinetocho 100.0 6.5E-49 2.2E-53 338.9 17.4 159 2-161 7-168 (169)
3 2p1m_A SKP1-like protein 1A; F 100.0 1.4E-48 4.7E-53 334.7 4.8 158 189-350 2-160 (160)
4 2ast_A S-phase kinase-associat 100.0 3.8E-46 1.3E-50 319.4 15.7 157 192-348 2-159 (159)
5 2ast_A S-phase kinase-associat 100.0 1.1E-45 3.8E-50 316.6 16.9 157 3-159 2-159 (159)
6 2p1m_A SKP1-like protein 1A; F 100.0 4.8E-47 1.7E-51 325.0 5.4 155 2-160 4-159 (160)
7 1fs1_B SKP1, cyclin A/CDK2-ass 100.0 2.8E-43 9.7E-48 295.4 12.7 141 1-146 1-141 (141)
8 1fs1_B SKP1, cyclin A/CDK2-ass 100.0 8.3E-43 2.8E-47 292.6 12.0 140 191-335 2-141 (141)
9 1hv2_A Elongin C, ELC1; protei 99.9 8.7E-26 3E-30 177.4 5.7 98 189-300 2-99 (99)
10 1hv2_A Elongin C, ELC1; protei 99.9 1.8E-25 6.3E-30 175.5 5.7 95 3-111 5-99 (99)
11 2fnj_C Transcription elongatio 99.9 2.8E-25 9.7E-30 173.5 6.0 95 191-300 1-96 (96)
12 1vcb_B Protein (elongin C); tu 99.9 3.8E-25 1.3E-29 177.3 6.7 97 189-300 15-112 (112)
13 2fnj_C Transcription elongatio 99.9 4.5E-25 1.5E-29 172.4 6.1 95 2-111 1-96 (96)
14 1vcb_B Protein (elongin C); tu 99.9 1.2E-24 4.1E-29 174.4 7.1 95 2-111 17-112 (112)
15 4ajy_C Transcription elongatio 99.9 5.3E-23 1.8E-27 161.1 7.0 96 1-111 1-97 (97)
16 4ajy_C Transcription elongatio 99.9 3E-22 1E-26 156.9 6.7 94 192-300 3-97 (97)
17 2vkp_A BTB/POZ domain-containi 98.7 9.7E-08 3.3E-12 75.0 10.3 97 190-314 8-108 (109)
18 2yy9_A Zinc finger and BTB dom 98.7 2E-08 6.9E-13 82.5 5.8 99 191-321 26-125 (135)
19 2vkp_A BTB/POZ domain-containi 98.7 1.5E-07 5.1E-12 73.9 10.6 96 2-125 9-108 (109)
20 2yy9_A Zinc finger and BTB dom 98.7 3.5E-08 1.2E-12 81.1 6.5 98 3-132 27-125 (135)
21 1buo_A POZ domain, protein (pr 98.6 3.1E-07 1.1E-11 73.7 10.5 93 190-315 28-121 (121)
22 1buo_A POZ domain, protein (pr 98.6 4.5E-07 1.5E-11 72.8 11.1 91 3-126 30-121 (121)
23 2if5_A Zinc finger and BTB dom 98.6 4.8E-07 1.6E-11 72.4 11.2 94 190-311 25-119 (120)
24 3htm_A Speckle-type POZ protei 98.6 5.6E-07 1.9E-11 76.4 11.6 107 191-325 35-142 (172)
25 2if5_A Zinc finger and BTB dom 98.5 8.1E-07 2.8E-11 71.0 11.3 92 3-122 27-119 (120)
26 2q81_A MIZ-1 protein; BTB/POZ 98.5 6.5E-07 2.2E-11 71.6 10.1 90 190-312 27-117 (119)
27 3htm_A Speckle-type POZ protei 98.5 9.8E-07 3.3E-11 74.8 11.8 105 3-135 36-141 (172)
28 1r29_A B-cell lymphoma 6 prote 98.5 1.1E-06 3.8E-11 70.9 11.1 94 190-312 29-124 (127)
29 2q81_A MIZ-1 protein; BTB/POZ 98.5 1.1E-06 3.7E-11 70.3 10.3 88 3-123 29-117 (119)
30 2vpk_A Myoneurin; transcriptio 98.5 1.4E-06 4.8E-11 69.2 10.9 91 190-312 22-115 (116)
31 3b84_A Zinc finger and BTB dom 98.5 4.8E-07 1.6E-11 72.4 8.0 92 190-313 24-116 (119)
32 1r29_A B-cell lymphoma 6 prote 98.4 1.5E-06 5.1E-11 70.2 11.0 92 3-123 31-124 (127)
33 2ppi_A Gigaxonin; BTB domain, 98.4 8.1E-07 2.8E-11 73.7 8.9 95 190-311 47-143 (144)
34 2vpk_A Myoneurin; transcriptio 98.4 2.4E-06 8.2E-11 67.8 11.2 89 3-123 24-115 (116)
35 3ga1_A Nucleus accumbens-assoc 98.4 4.8E-07 1.6E-11 73.5 6.9 92 190-313 33-126 (129)
36 3b84_A Zinc finger and BTB dom 98.4 8.6E-07 2.9E-11 70.9 8.2 90 3-124 26-116 (119)
37 4eoz_A Speckle-type POZ protei 98.4 3.6E-07 1.2E-11 75.3 6.2 102 190-319 25-127 (145)
38 2ppi_A Gigaxonin; BTB domain, 98.4 1.3E-06 4.6E-11 72.3 9.2 93 3-122 49-143 (144)
39 3ga1_A Nucleus accumbens-assoc 98.4 8.6E-07 2.9E-11 71.9 7.3 90 3-124 35-126 (129)
40 4eoz_A Speckle-type POZ protei 98.3 6.7E-07 2.3E-11 73.7 6.1 100 3-130 27-127 (145)
41 2z8h_A Transcription regulator 98.3 2E-06 6.8E-11 70.6 8.6 97 190-316 36-134 (138)
42 2z8h_A Transcription regulator 98.3 2.3E-06 7.9E-11 70.2 8.9 95 3-127 38-134 (138)
43 3i3n_A Kelch-like protein 11; 98.2 1.6E-06 5.4E-11 79.7 7.3 108 190-324 32-148 (279)
44 3ohu_A Transcription regulator 98.2 6.2E-07 2.1E-11 72.3 3.9 89 3-121 34-124 (125)
45 3hve_A Gigaxonin; ubiquitin, c 98.2 2.7E-06 9.1E-11 77.2 8.5 105 190-321 31-137 (256)
46 3i3n_A Kelch-like protein 11; 98.2 2.5E-06 8.5E-11 78.4 8.2 108 2-136 33-149 (279)
47 3ohu_A Transcription regulator 98.2 6E-07 2E-11 72.4 3.4 91 190-310 32-124 (125)
48 3hve_A Gigaxonin; ubiquitin, c 98.2 4.3E-06 1.5E-10 75.8 9.1 106 3-135 33-140 (256)
49 3m5b_A Zinc finger and BTB dom 98.1 2.3E-06 7.8E-11 68.6 4.9 86 191-313 31-117 (119)
50 3hqi_A Speckle-type POZ protei 98.1 1.2E-05 4E-10 75.0 10.5 107 190-324 174-281 (312)
51 3m5b_A Zinc finger and BTB dom 98.1 2.8E-06 9.5E-11 68.1 5.2 86 2-124 31-117 (119)
52 3hqi_A Speckle-type POZ protei 98.1 1.8E-05 6.3E-10 73.7 10.7 105 3-135 176-281 (312)
53 3fkc_A Transcriptional regulat 98.0 1.4E-05 4.7E-10 63.6 7.6 84 190-305 31-115 (116)
54 2ihc_A Transcription regulator 98.0 4.4E-06 1.5E-10 67.2 4.3 90 3-122 31-122 (124)
55 2ihc_A Transcription regulator 98.0 4.1E-06 1.4E-10 67.4 3.9 92 190-311 29-122 (124)
56 3fkc_A Transcriptional regulat 98.0 2.2E-05 7.4E-10 62.4 8.0 82 3-116 33-115 (116)
57 3drz_A BTB/POZ domain-containi 82.2 10 0.00035 28.7 9.2 97 190-313 5-106 (107)
58 3drz_A BTB/POZ domain-containi 78.3 8 0.00027 29.4 7.4 90 9-124 12-106 (107)
59 3drx_A BTB/POZ domain-containi 43.8 37 0.0012 29.0 5.5 98 190-314 11-113 (202)
60 2k9n_A MYB24; R2R3 domain, DNA 43.2 26 0.0009 26.3 4.2 35 309-343 25-66 (107)
61 2xf7_A GP23.1; viral protein; 38.8 32 0.0011 21.8 3.2 34 313-348 13-47 (51)
62 1gv2_A C-MYB, MYB proto-oncoge 37.4 24 0.00082 26.3 3.1 36 309-344 28-70 (105)
63 2k9n_A MYB24; R2R3 domain, DNA 34.9 40 0.0014 25.3 4.0 40 120-159 25-76 (107)
64 1pd7_B MAD1; PAH2, SIN3, eukar 33.9 8.4 0.00029 21.4 -0.0 12 288-299 5-16 (26)
65 1h8a_C AMV V-MYB, MYB transfor 32.1 45 0.0015 25.9 4.0 36 308-343 50-92 (128)
66 1wgx_A KIAA1903 protein; MYB D 32.0 27 0.00092 24.7 2.3 39 96-138 15-53 (73)
67 2cqq_A RSGI RUH-037, DNAJ homo 29.4 34 0.0012 24.0 2.5 18 120-138 35-52 (72)
68 1wgx_A KIAA1903 protein; MYB D 28.6 34 0.0012 24.2 2.4 40 285-328 15-54 (73)
69 4eef_G F-HB80.4, designed hema 27.5 15 0.0005 26.1 0.3 46 93-142 24-69 (74)
70 3tnt_A SARS coronavirus main p 26.8 33 0.0011 30.7 2.5 103 232-338 190-296 (306)
71 3osg_A MYB21; transcription-DN 25.7 43 0.0015 26.0 2.8 36 308-343 33-75 (126)
72 1h8a_C AMV V-MYB, MYB transfor 25.3 66 0.0023 24.8 3.9 36 119-154 50-92 (128)
73 3g5o_A Uncharacterized protein 25.1 1.2E+02 0.0043 22.7 5.3 49 94-142 47-97 (108)
74 3zqc_A MYB3; transcription-DNA 25.0 36 0.0012 26.6 2.2 34 310-343 27-67 (131)
75 2jsp_A Transcriptional regulat 24.7 30 0.001 25.4 1.5 18 128-145 43-60 (87)
76 2qq4_A Iron-sulfur cluster bio 23.5 64 0.0022 25.6 3.5 36 103-138 54-90 (138)
77 3lvl_A NIFU-like protein; prot 23.3 59 0.002 25.4 3.2 37 102-138 53-90 (129)
78 3g5o_A Uncharacterized protein 22.2 1.5E+02 0.005 22.3 5.2 49 283-331 47-97 (108)
79 1xjs_A NIFU-like protein; SR17 22.0 70 0.0024 25.6 3.5 37 102-138 55-92 (147)
80 1ug2_A 2610100B20RIK gene prod 21.5 58 0.002 24.0 2.5 19 309-327 59-77 (95)
81 1s1g_A Potassium voltage-gated 21.1 80 0.0028 24.5 3.5 93 189-310 11-107 (124)
82 2kw0_A CCMH protein; oxidoredu 20.8 60 0.002 23.9 2.5 17 122-138 49-66 (90)
83 2hl7_A Cytochrome C-type bioge 20.2 63 0.0021 23.5 2.5 17 122-138 52-69 (84)
84 2qq4_A Iron-sulfur cluster bio 20.2 84 0.0029 24.8 3.5 37 291-327 53-90 (138)
85 1ug2_A 2610100B20RIK gene prod 20.2 65 0.0022 23.8 2.6 40 96-138 38-77 (95)
86 1su0_B NIFU like protein ISCU; 20.1 90 0.0031 25.4 3.8 38 102-139 54-92 (159)
No 1
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=100.00 E-value=2.2e-50 Score=348.10 Aligned_cols=161 Identities=52% Similarity=0.930 Sum_probs=133.8
Q ss_pred CccEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCCC---CCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIAKSSVTIKTMVEDLGLED---EDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENK 266 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a~~S~~l~~~l~~~~~~~---~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~ 266 (351)
+++|+|+|+||++|.|++.+|++|++|++|+++.|.+. ....+||||+|+|.+|++|++||+||+.++.+.... ..
T Consensus 6 ~~~i~L~SsDG~~F~V~~~vA~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~-~~ 84 (169)
T 3v7d_A 6 TSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDD-DD 84 (169)
T ss_dssp CCEEEEECTTCCEEEEEHHHHTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC------
T ss_pred CCeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccc-cc
Confidence 48999999999999999999999999999999866421 123789999999999999999999999887543211 12
Q ss_pred ccccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHHHhhCCCHHHHHHHcCCCCCCCHHHHHHHHHhcc
Q psy4644 267 EKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENE 346 (351)
Q Consensus 267 ~~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gks~eEir~~f~i~~d~t~eee~~i~~e~~ 346 (351)
......+++||++|++++...||+||.|||||+|++|+++||++||++|+||||||||++|||++|||||||++||+||+
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd~t~eEe~~ir~en~ 164 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENE 164 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCCCCHHHHHHHHTTC-
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHhcc
Confidence 23456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccC
Q psy4644 347 WCEEK 351 (351)
Q Consensus 347 W~~~~ 351 (351)
|+||.
T Consensus 165 W~~~~ 169 (169)
T 3v7d_A 165 WAEDR 169 (169)
T ss_dssp -----
T ss_pred ccccC
Confidence 99973
No 2
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=100.00 E-value=6.5e-49 Score=338.95 Aligned_cols=159 Identities=53% Similarity=0.924 Sum_probs=132.5
Q ss_pred CceEEEcCCCCEEEecHHHHHHhHHHHHhHhhcCCCC---CCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccc
Q psy4644 2 PNIKLQSSDGEIFNVDFEIAKSSVTIKTMVEDLGLED---EDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKE 78 (351)
Q Consensus 2 ~~i~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~~~~---~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~ 78 (351)
++|+|+|+||++|.|++.+|++|++|++|+++.|... +...+||||+|++.+|++|++||+||+.++.+..+. ...
T Consensus 7 ~~i~L~SsDG~~F~V~~~vA~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~-~~~ 85 (169)
T 3v7d_A 7 SNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDD-DDS 85 (169)
T ss_dssp CEEEEECTTCCEEEEEHHHHTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred CeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccc-ccc
Confidence 5799999999999999999999999999999766421 123789999999999999999999999887543211 111
Q ss_pred cccCccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHHHHcCCCHHHHHhHcCCCCCCChHHHHHHHhhhhh
Q psy4644 79 KRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158 (351)
Q Consensus 79 ~~~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gkt~eEiR~~f~i~~d~t~eEe~~i~~e~~w 158 (351)
.....+++||++|++++++.||+||.|||||+|++|+++||++||++|+||||+|||++|||++|||||||++||+||+|
T Consensus 86 ~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd~t~eEe~~ir~en~W 165 (169)
T 3v7d_A 86 RKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEW 165 (169)
T ss_dssp --CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCCCCHHHHHHHHTTC--
T ss_pred cccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHhccc
Confidence 24457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhH
Q psy4644 159 CTL 161 (351)
Q Consensus 159 ~~~ 161 (351)
+|.
T Consensus 166 ~~~ 168 (169)
T 3v7d_A 166 AED 168 (169)
T ss_dssp ---
T ss_pred ccc
Confidence 963
No 3
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=100.00 E-value=1.4e-48 Score=334.66 Aligned_cols=158 Identities=58% Similarity=0.858 Sum_probs=89.3
Q ss_pred CCccEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcc-ccc
Q psy4644 189 VNSAILRKSSDGEIFNVDFEIAKSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDE-NKE 267 (351)
Q Consensus 189 ~~~~i~L~S~DG~~f~v~~~~a~~S~~l~~~l~~~~~~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~-~~~ 267 (351)
++++|+|+|+||++|.|++.+|++|++|++|+++.+ ...+||||+|++.+|++|++||+||+.++.+..... ...
T Consensus 2 ~~~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~----~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~ 77 (160)
T 2p1m_A 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDC----VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAA 77 (160)
T ss_dssp ------CCC---------CHHHHTCTTTC----------------CCTTSCHHHHHHHHHC-------------------
T ss_pred CCCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHccC----CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccc
Confidence 467899999999999999999999999999998754 356899999999999999999999998764432211 112
Q ss_pred cccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHHHhhCCCHHHHHHHcCCCCCCCHHHHHHHHHhccc
Q psy4644 268 KRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 347 (351)
Q Consensus 268 ~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gks~eEir~~f~i~~d~t~eee~~i~~e~~W 347 (351)
.....+++||++|++++.+.||+||.|||||+|++|+++||++||++|+||||+|||++|||++|||||||++||+||+|
T Consensus 78 ~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~eEe~~ir~en~w 157 (160)
T 2p1m_A 78 TSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQW 157 (160)
T ss_dssp -----------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCHHHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHhCcc
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc
Q psy4644 348 CEE 350 (351)
Q Consensus 348 ~~~ 350 (351)
+||
T Consensus 158 ~~~ 160 (160)
T 2p1m_A 158 AFE 160 (160)
T ss_dssp HHC
T ss_pred ccC
Confidence 986
No 4
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=100.00 E-value=3.8e-46 Score=319.45 Aligned_cols=157 Identities=83% Similarity=1.275 Sum_probs=135.2
Q ss_pred cEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCC-CCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccccc
Q psy4644 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVEDLGLE-DEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRT 270 (351)
Q Consensus 192 ~i~L~S~DG~~f~v~~~~a~~S~~l~~~l~~~~~~-~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~~~ 270 (351)
.|+|+|+||++|.|++.+|.+|++|++|+++.|.. +....+||||+|++.+|++|++||+||++++.+..+.+......
T Consensus 2 ~v~L~ssDg~~f~v~~~vA~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 2 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEEECTTSCEEEEEHHHHHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred eEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 38999999999999999999999999999976543 34457899999999999999999999998876554433333445
Q ss_pred ccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHHHhhCCCHHHHHHHcCCCCCCCHHHHHHHHHhcccc
Q psy4644 271 DDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 348 (351)
Q Consensus 271 ~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gks~eEir~~f~i~~d~t~eee~~i~~e~~W~ 348 (351)
..+++||++|++++.+.|++|+.|||||+|++|+++||++||++|+||||+|||++|||++|||||||++||+||+|+
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eEe~~ir~en~w~ 159 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 159 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTHHHHHHHHTTTC
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHhCCCC
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999999996
No 5
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=100.00 E-value=1.1e-45 Score=316.55 Aligned_cols=157 Identities=85% Similarity=1.302 Sum_probs=134.9
Q ss_pred ceEEEcCCCCEEEecHHHHHHhHHHHHhHhhcCCC-CCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIAKSSVTIKTMVEDLGLE-DEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRT 81 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~~~-~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~~ 81 (351)
+|+|+|+||++|.|++.+|.+|++|++|+++.|.. +....+||||+|++.+|++|++||+||+.++++..+.+......
T Consensus 2 ~v~L~ssDg~~f~v~~~vA~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 2 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEEECTTSCEEEEEHHHHHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred eEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 58999999999999999999999999999975543 33457899999999999999999999998775544333323345
Q ss_pred CccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHHHHcCCCHHHHHhHcCCCCCCChHHHHHHHhhhhhh
Q psy4644 82 DDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159 (351)
Q Consensus 82 ~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gkt~eEiR~~f~i~~d~t~eEe~~i~~e~~w~ 159 (351)
..+++||++|++++.+.|++|+.|||||+|++|+++||++||++|+||||+|||++|||++||||||+++||+||+|+
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eEe~~ir~en~w~ 159 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 159 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTHHHHHHHHTTTC
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHhCCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999999999996
No 6
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=100.00 E-value=4.8e-47 Score=325.02 Aligned_cols=155 Identities=59% Similarity=0.889 Sum_probs=88.3
Q ss_pred CceEEEcCCCCEEEecHHHHHHhHHHHHhHhhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCc-cccccc
Q psy4644 2 PNIKLQSSDGEIFNVDFEIAKSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDD-ENKEKR 80 (351)
Q Consensus 2 ~~i~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~~~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~-~~~~~~ 80 (351)
++|+|+|+||++|.|++.+|++|++|++|+++.+ ...+||||+|++.+|++|++||+||+.++++.... +.....
T Consensus 4 ~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~----~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 79 (160)
T 2p1m_A 4 KKIVLKSSDGESFEVEEAVALESQTIAHMVEDDC----VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATS 79 (160)
T ss_dssp ----CCC---------CHHHHTCTTTC----------------CCTTSCHHHHHHHHHC---------------------
T ss_pred CEEEEEcCCCCEEEECHHHHHHhHHHHHHHHccC----CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccc
Confidence 4699999999999999999999999999998754 24689999999999999999999999876432211 111234
Q ss_pred cCccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHHHHcCCCHHHHHhHcCCCCCCChHHHHHHHhhhhhhh
Q psy4644 81 TDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCT 160 (351)
Q Consensus 81 ~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gkt~eEiR~~f~i~~d~t~eEe~~i~~e~~w~~ 160 (351)
...+++||++|++++.+.||+|+.|||||+|++|+++||++||++|+||||+|||++|||++|||||||++||+||+|++
T Consensus 80 ~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~eEe~~ir~en~w~~ 159 (160)
T 2p1m_A 80 DDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAF 159 (160)
T ss_dssp ---------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHhCcccc
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999996
No 7
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=100.00 E-value=2.8e-43 Score=295.43 Aligned_cols=141 Identities=88% Similarity=1.305 Sum_probs=112.3
Q ss_pred CCceEEEcCCCCEEEecHHHHHHhHHHHHhHhhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccccc
Q psy4644 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKR 80 (351)
Q Consensus 1 m~~i~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~~~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~ 80 (351)
|++|+|+|+||++|.|++.+|++|++|++|+++.| ..+||||+|++.+|++|++||+||+.++.+..+.+.....
T Consensus 1 m~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~-----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 75 (141)
T 1fs1_B 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLG-----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 75 (141)
T ss_dssp -CEEEEECTTSCEEEEEGGGGGTCHHHHHHHHHTC-----CSSEECTTCCHHHHHHHHHHHHHHTTCC------------
T ss_pred CCeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcC-----CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccc
Confidence 89999999999999999999999999999999864 3589999999999999999999999876544333322334
Q ss_pred cCccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHHHHcCCCHHHHHhHcCCCCCCCh
Q psy4644 81 TDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQ 146 (351)
Q Consensus 81 ~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gkt~eEiR~~f~i~~d~t~ 146 (351)
...+++||++|++++.+.||+|+.|||||+|++|+++||++||++|+||||+|||++|||++||||
T Consensus 76 ~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~~f~I~~d~tp 141 (141)
T 1fs1_B 76 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTE 141 (141)
T ss_dssp -----HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHHHTC-------
T ss_pred hhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCC
Confidence 567899999999999999999999999999999999999999999999999999999999999997
No 8
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=100.00 E-value=8.3e-43 Score=292.60 Aligned_cols=140 Identities=85% Similarity=1.258 Sum_probs=111.7
Q ss_pred ccEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccccc
Q psy4644 191 SAILRKSSDGEIFNVDFEIAKSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRT 270 (351)
Q Consensus 191 ~~i~L~S~DG~~f~v~~~~a~~S~~l~~~l~~~~~~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~~~ 270 (351)
+.|+|+|+||++|.|++.+|++|++|++|+++.| ..+||||+|++.+|++|++||+||++++.+..+.+......
T Consensus 2 ~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~-----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 76 (141)
T 1fs1_B 2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLG-----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 76 (141)
T ss_dssp CEEEEECTTSCEEEEEGGGGGTCHHHHHHHHHTC-----CSSEECTTCCHHHHHHHHHHHHHHTTCC-------------
T ss_pred CeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcC-----CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccch
Confidence 4699999999999999999999999999999854 45899999999999999999999998875544333223345
Q ss_pred ccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHHHhhCCCHHHHHHHcCCCCCCCH
Q psy4644 271 DDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQ 335 (351)
Q Consensus 271 ~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gks~eEir~~f~i~~d~t~ 335 (351)
..+++||++|++++.+.|++|+.|||||+|++|+++||++||++|+||||||||++|||++||||
T Consensus 77 ~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~~f~I~~d~tp 141 (141)
T 1fs1_B 77 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTE 141 (141)
T ss_dssp ----HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHHHTC-------
T ss_pred hhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCC
Confidence 67899999999999999999999999999999999999999999999999999999999999997
No 9
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=99.92 E-value=8.7e-26 Score=177.39 Aligned_cols=98 Identities=26% Similarity=0.402 Sum_probs=84.1
Q ss_pred CCccEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccc
Q psy4644 189 VNSAILRKSSDGEIFNVDFEIAKSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEK 268 (351)
Q Consensus 189 ~~~~i~L~S~DG~~f~v~~~~a~~S~~l~~~l~~~~~~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~ 268 (351)
++++|+|+|+||++|.|++++|++|++|++|+++ |. ++...+||||+|++.+|+||++||+||++++.+. .
T Consensus 2 ~~~~v~L~SsDg~~f~V~~~vA~~S~~ik~ml~~-~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~-------~ 72 (99)
T 1hv2_A 2 SQDFVTLVSKDDKEYEISRSAAMISPTLKAMIEG-PF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVS-------E 72 (99)
T ss_dssp CCSEEEEEETTTEEEEEEHHHHTTCHHHHHHHHS-ST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHC-------S
T ss_pred CCcEEEEEecCCCEEEECHHHHHHhHHHHHHHhc-cc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCc-------c
Confidence 3578999999999999999999999999999998 54 3345789999999999999999999999754321 1
Q ss_pred ccccccchhhhhhcCChHHHHHHHHhhhccCc
Q psy4644 269 RTDDISSWDADFLKVDQGTLFELILAANYLDI 300 (351)
Q Consensus 269 ~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I 300 (351)
....+++| +++++.||+|+.|||||+|
T Consensus 73 ~~~~i~~w-----~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 73 DDDEIPEF-----EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp SCSSCCCC-----CCCHHHHHHHHHHHHHHCC
T ss_pred ccccCCCc-----cCCHHHHHHHHHHHHHhCc
Confidence 23467888 6899999999999999997
No 10
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=99.91 E-value=1.8e-25 Score=175.54 Aligned_cols=95 Identities=27% Similarity=0.438 Sum_probs=82.0
Q ss_pred ceEEEcCCCCEEEecHHHHHHhHHHHHhHhhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccccccC
Q psy4644 3 NIKLQSSDGEIFNVDFEIAKSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRTD 82 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~~~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~~~ 82 (351)
+|+|+|+||++|.|++.+|++|++|++|+++ |. ++...+||||+|++.+|++|++||+||+.++.+. ....
T Consensus 5 ~v~L~SsDg~~f~V~~~vA~~S~~ik~ml~~-~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~-------~~~~ 75 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSAAMISPTLKAMIEG-PF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVS-------EDDD 75 (99)
T ss_dssp EEEEEETTTEEEEEEHHHHTTCHHHHHHHHS-ST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHC-------SSCS
T ss_pred EEEEEecCCCEEEECHHHHHHhHHHHHHHhc-cc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCc-------cccc
Confidence 7999999999999999999999999999998 54 3345789999999999999999999999654221 1234
Q ss_pred ccchhHHHhccCChhHHHHHHHHhhhcCc
Q psy4644 83 DISSWDADFLKVDQGTLFELILAANYLDI 111 (351)
Q Consensus 83 ~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I 111 (351)
.+++| +++++.||+|+.|||||+|
T Consensus 76 ~i~~w-----~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 76 EIPEF-----EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp SCCCC-----CCCHHHHHHHHHHHHHHCC
T ss_pred cCCCc-----cCCHHHHHHHHHHHHHhCc
Confidence 57888 7999999999999999997
No 11
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=99.91 E-value=2.8e-25 Score=173.54 Aligned_cols=95 Identities=31% Similarity=0.396 Sum_probs=79.1
Q ss_pred ccEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCC-CCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccccc
Q psy4644 191 SAILRKSSDGEIFNVDFEIAKSSVTIKTMVEDLGL-EDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKR 269 (351)
Q Consensus 191 ~~i~L~S~DG~~f~v~~~~a~~S~~l~~~l~~~~~-~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~~ 269 (351)
.+|+|+|+||++|.|++++|++|++|++|+++.|. .+....+||||+|++.+|+||++||+||+.++..
T Consensus 1 ~~v~L~SsDg~~f~V~~~~A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~---------- 70 (96)
T 2fnj_C 1 MYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNS---------- 70 (96)
T ss_dssp CEEEEECTTSCEEEEEHHHHTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSC----------
T ss_pred CeEEEEecCCCEEEeCHHHHHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCC----------
Confidence 37999999999999999999999999999998654 2334578999999999999999999999965422
Q ss_pred cccccchhhhhhcCChHHHHHHHHhhhccCc
Q psy4644 270 TDDISSWDADFLKVDQGTLFELILAANYLDI 300 (351)
Q Consensus 270 ~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I 300 (351)
...+++| +++++.||+|+.|||||+|
T Consensus 71 ~~~i~~w-----~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 71 STEIPEF-----PIAPEIALELLMAANFLDC 96 (96)
T ss_dssp CSCCCCC-----CCCTTTHHHHHHHHHHHTC
T ss_pred cccCCCc-----ccCHHHHHHHHHHHHHhCc
Confidence 2356788 7899999999999999997
No 12
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=99.91 E-value=3.8e-25 Score=177.25 Aligned_cols=97 Identities=30% Similarity=0.377 Sum_probs=80.0
Q ss_pred CCccEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCC-CCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccc
Q psy4644 189 VNSAILRKSSDGEIFNVDFEIAKSSVTIKTMVEDLGL-EDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKE 267 (351)
Q Consensus 189 ~~~~i~L~S~DG~~f~v~~~~a~~S~~l~~~l~~~~~-~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~ 267 (351)
.+++|+|+|+||++|.|++++|++|++|++|+++.|. .+....+||||+|++.+|+||++||+||+.++..
T Consensus 15 ~~~~v~L~SsDG~~F~V~~~~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~-------- 86 (112)
T 1vcb_B 15 DAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNS-------- 86 (112)
T ss_dssp --CEEEEECTTSCEEEEEHHHHHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSC--------
T ss_pred CCCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCC--------
Confidence 4689999999999999999999999999999997654 2333468999999999999999999999975422
Q ss_pred cccccccchhhhhhcCChHHHHHHHHhhhccCc
Q psy4644 268 KRTDDISSWDADFLKVDQGTLFELILAANYLDI 300 (351)
Q Consensus 268 ~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I 300 (351)
...+++| ++++..||+||.|||||+|
T Consensus 87 --~~~i~~w-----~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 87 --STEIPEF-----PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp --SSCCCCC-----CCCHHHHHHHHHHHHHHTC
T ss_pred --cCCCCCc-----ccCHHHHHHHHHHHHHhCc
Confidence 2357788 7899999999999999997
No 13
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=99.91 E-value=4.5e-25 Score=172.39 Aligned_cols=95 Identities=33% Similarity=0.436 Sum_probs=79.1
Q ss_pred CceEEEcCCCCEEEecHHHHHHhHHHHHhHhhcCC-CCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccccc
Q psy4644 2 PNIKLQSSDGEIFNVDFEIAKSSVTIKTMVEDLGL-EDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKR 80 (351)
Q Consensus 2 ~~i~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~~-~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~ 80 (351)
.+|+|+|+||++|.|++.+|++|++|++|+++.|. .+....+||||+|++.+|++|++||+||+.++..
T Consensus 1 ~~v~L~SsDg~~f~V~~~~A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~---------- 70 (96)
T 2fnj_C 1 MYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNS---------- 70 (96)
T ss_dssp CEEEEECTTSCEEEEEHHHHTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSC----------
T ss_pred CeEEEEecCCCEEEeCHHHHHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCC----------
Confidence 37999999999999999999999999999998654 2334478999999999999999999999865421
Q ss_pred cCccchhHHHhccCChhHHHHHHHHhhhcCc
Q psy4644 81 TDDISSWDADFLKVDQGTLFELILAANYLDI 111 (351)
Q Consensus 81 ~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I 111 (351)
...+++| +++++.||+|+.|||||+|
T Consensus 71 ~~~i~~w-----~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 71 STEIPEF-----PIAPEIALELLMAANFLDC 96 (96)
T ss_dssp CSCCCCC-----CCCTTTHHHHHHHHHHHTC
T ss_pred cccCCCc-----ccCHHHHHHHHHHHHHhCc
Confidence 2347788 7899999999999999997
No 14
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=99.90 E-value=1.2e-24 Score=174.36 Aligned_cols=95 Identities=33% Similarity=0.436 Sum_probs=79.4
Q ss_pred CceEEEcCCCCEEEecHHHHHHhHHHHHhHhhcCC-CCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccccc
Q psy4644 2 PNIKLQSSDGEIFNVDFEIAKSSVTIKTMVEDLGL-EDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKR 80 (351)
Q Consensus 2 ~~i~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~~-~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~ 80 (351)
++|+|+|+||++|.|++.+|++|++|++|+++.|. .+....+||||+|++.+|+|||+||+||+.++..
T Consensus 17 ~~v~L~SsDG~~F~V~~~~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~---------- 86 (112)
T 1vcb_B 17 MYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNS---------- 86 (112)
T ss_dssp CEEEEECTTSCEEEEEHHHHHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSC----------
T ss_pred CEEEEEcCCCCEEEECHHHHHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCC----------
Confidence 57999999999999999999999999999997654 2323468999999999999999999999865421
Q ss_pred cCccchhHHHhccCChhHHHHHHHHhhhcCc
Q psy4644 81 TDDISSWDADFLKVDQGTLFELILAANYLDI 111 (351)
Q Consensus 81 ~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I 111 (351)
...+++| +++++.||+||.|||||+|
T Consensus 87 ~~~i~~w-----~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 87 STEIPEF-----PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp SSCCCCC-----CCCHHHHHHHHHHHHHHTC
T ss_pred cCCCCCc-----ccCHHHHHHHHHHHHHhCc
Confidence 2347788 7999999999999999997
No 15
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.88 E-value=5.3e-23 Score=161.12 Aligned_cols=96 Identities=33% Similarity=0.447 Sum_probs=79.3
Q ss_pred CCceEEEcCCCCEEEecHHHHHHhHHHHHhHhhcCC-CCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccc
Q psy4644 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVEDLGL-EDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEK 79 (351)
Q Consensus 1 m~~i~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~~-~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~ 79 (351)
|.+|+|+|+||++|.|++.+|.+|++|++|+++.|. .++...+||||+|++.+|++|++||+||+.++..
T Consensus 1 ~~~v~L~SsDg~~F~v~r~vA~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~--------- 71 (97)
T 4ajy_C 1 MMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNS--------- 71 (97)
T ss_dssp -CEEEEECTTCCEEEEEHHHHTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTC---------
T ss_pred CeEEEEEecCCcEEEecHHHHHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCC---------
Confidence 778999999999999999999999999999987543 2334679999999999999999999999875421
Q ss_pred ccCccchhHHHhccCChhHHHHHHHHhhhcCc
Q psy4644 80 RTDDISSWDADFLKVDQGTLFELILAANYLDI 111 (351)
Q Consensus 80 ~~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I 111 (351)
...+++| +++++.+++|+.|||||+.
T Consensus 72 -~~~i~~~-----~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 72 -STEIPEF-----PIAPEIALELLMAANFLDC 97 (97)
T ss_dssp -CSCCCCC-----CCCGGGHHHHHHHHHHHTC
T ss_pred -cCCCCcC-----cCCHHHHHHHHHHHhhhCC
Confidence 2357888 5899999999999999983
No 16
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.86 E-value=3e-22 Score=156.87 Aligned_cols=94 Identities=31% Similarity=0.405 Sum_probs=78.2
Q ss_pred cEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCC-CCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccccc
Q psy4644 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVEDLGL-EDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRT 270 (351)
Q Consensus 192 ~i~L~S~DG~~f~v~~~~a~~S~~l~~~l~~~~~-~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~~~ 270 (351)
+|+|+|+||++|.|++.+|.+|++|++|+++.|. .+....+||||+|++.+|++|++||+||+.++.. .
T Consensus 3 ~v~L~SsDg~~F~v~r~vA~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~----------~ 72 (97)
T 4ajy_C 3 YVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNS----------S 72 (97)
T ss_dssp EEEEECTTCCEEEEEHHHHTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTC----------C
T ss_pred EEEEEecCCcEEEecHHHHHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCC----------c
Confidence 6899999999999999999999999999987543 2334679999999999999999999999876421 2
Q ss_pred ccccchhhhhhcCChHHHHHHHHhhhccCc
Q psy4644 271 DDISSWDADFLKVDQGTLFELILAANYLDI 300 (351)
Q Consensus 271 ~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I 300 (351)
..+++| +++.+.+++|+.|||||+.
T Consensus 73 ~~i~~~-----~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 73 TEIPEF-----PIAPEIALELLMAANFLDC 97 (97)
T ss_dssp SCCCCC-----CCCGGGHHHHHHHHHHHTC
T ss_pred CCCCcC-----cCCHHHHHHHHHHHhhhCC
Confidence 357888 5899999999999999983
No 17
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.70 E-value=9.7e-08 Score=75.03 Aligned_cols=97 Identities=10% Similarity=0.096 Sum_probs=78.1
Q ss_pred CccEEEEcCCC---CEEEeCHHHH-HHhHHHHHHHHhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccc
Q psy4644 190 NSAILRKSSDG---EIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDEN 265 (351)
Q Consensus 190 ~~~i~L~S~DG---~~f~v~~~~a-~~S~~l~~~l~~~~~~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~ 265 (351)
-..|+|+..+| +.|.+++.++ ..|++++.|+... ..+.. ..|.+++++..+++.+++|++...-
T Consensus 8 ~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~-~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~---------- 75 (109)
T 2vkp_A 8 MADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGD-LAEVK-SEIHIPDVEPAAFLILLKYMYSDEI---------- 75 (109)
T ss_dssp TCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC-------C-CEEEETTSCHHHHHHHHHHHHHCCC----------
T ss_pred cccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCC-cccCC-CeEEeCCCCHHHHHHHHHHHcCCCc----------
Confidence 46789998886 9999999985 5899999999753 22223 7899999999999999999996321
Q ss_pred cccccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHHH
Q psy4644 266 KEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 314 (351)
Q Consensus 266 ~~~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~ 314 (351)
.++.+.+.+|+.||++++++.|.+.|++++...
T Consensus 76 ----------------~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 76 ----------------DLEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp ----------------CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ----------------cCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 134467889999999999999999999998764
No 18
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.67 E-value=2e-08 Score=82.54 Aligned_cols=99 Identities=15% Similarity=0.164 Sum_probs=74.2
Q ss_pred ccEEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccccc
Q psy4644 191 SAILRKSSDGEIFNVDFEI-AKSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKR 269 (351)
Q Consensus 191 ~~i~L~S~DG~~f~v~~~~-a~~S~~l~~~l~~~~~~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~~ 269 (351)
..|+|+. +|+.|.+++.+ +..|.+++.|+... ....|.|++++..+++.+++|++...-
T Consensus 26 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~-----~~~~i~l~~~~~~~f~~lL~fiYtg~~-------------- 85 (135)
T 2yy9_A 26 CDATLDV-GGLVFKAHWSVLACCSHFFQRIYGDG-----TGGSVVLPAGFAEIFGLLLDFFYTGHL-------------- 85 (135)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHTCC---------CCEEECGGGHHHHHHHHHHHHHSCC--------------
T ss_pred cceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCC-----CCCeEEeCCCCHHHHHHHHHHHhCCCC--------------
Confidence 5677776 68999999997 56899999998742 146789999999999999999996431
Q ss_pred cccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHHHhhCCCHH
Q psy4644 270 TDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPE 321 (351)
Q Consensus 270 ~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gks~e 321 (351)
.++.+.+.+|+.||++|+|+.|.+.|++++...+.|+++.
T Consensus 86 ------------~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~~~ 125 (135)
T 2yy9_A 86 ------------ALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQAQS 125 (135)
T ss_dssp ------------CCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC---------
T ss_pred ------------CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCCCC
Confidence 2345568999999999999999999999999988887654
No 19
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.67 E-value=1.5e-07 Score=73.93 Aligned_cols=96 Identities=10% Similarity=0.138 Sum_probs=76.7
Q ss_pred CceEEEcCCC---CEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccc
Q psy4644 2 PNIKLQSSDG---EIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENK 77 (351)
Q Consensus 2 ~~i~L~S~DG---~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~ 77 (351)
+.|+|+..+| +.|.+++.++ ..|++++.|+... ..+.. ..|.+++++..+++.+++|++....
T Consensus 9 ~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~-~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~----------- 75 (109)
T 2vkp_A 9 ADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGD-LAEVK-SEIHIPDVEPAAFLILLKYMYSDEI----------- 75 (109)
T ss_dssp CCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC-------C-CEEEETTSCHHHHHHHHHHHHHCCC-----------
T ss_pred ccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCC-cccCC-CeEEeCCCCHHHHHHHHHHHcCCCc-----------
Confidence 4588888886 9999999985 5899999999753 22223 7899999999999999999997431
Q ss_pred ccccCccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHHH
Q psy4644 78 EKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 125 (351)
Q Consensus 78 ~~~~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~ 125 (351)
.++.+.+.+|+.||++++++.|.+.|.+++...
T Consensus 76 ---------------~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 76 ---------------DLEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp ---------------CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ---------------cCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 134466889999999999999999999998764
No 20
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.65 E-value=3.5e-08 Score=81.08 Aligned_cols=98 Identities=16% Similarity=0.197 Sum_probs=73.0
Q ss_pred ceEEEcCCCCEEEecHHH-HHHhHHHHHhHhhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEI-AKSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRT 81 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~-a~~S~~i~~~l~~~~~~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~~ 81 (351)
.|+|+. +|+.|.+++.+ +..|.+++.|+.... ...|.+++++..+++.+++|++...-
T Consensus 27 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~-----~~~i~l~~~~~~~f~~lL~fiYtg~~--------------- 85 (135)
T 2yy9_A 27 DATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT-----GGSVVLPAGFAEIFGLLLDFFYTGHL--------------- 85 (135)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHTCC---------CCEEECGGGHHHHHHHHHHHHHSCC---------------
T ss_pred ceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC-----CCeEEeCCCCHHHHHHHHHHHhCCCC---------------
Confidence 466765 68999999997 567999999997532 46789999999999999999997432
Q ss_pred CccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHHHHcCCCHH
Q psy4644 82 DDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPE 132 (351)
Q Consensus 82 ~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gkt~e 132 (351)
.++.+.+.+|+.||++|+|+.|.+.|++++...+.|+++.
T Consensus 86 -----------~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~~~ 125 (135)
T 2yy9_A 86 -----------ALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQAQS 125 (135)
T ss_dssp -----------CCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC---------
T ss_pred -----------CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCCCC
Confidence 2344568999999999999999999999999988887654
No 21
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=98.59 E-value=3.1e-07 Score=73.73 Aligned_cols=93 Identities=15% Similarity=0.209 Sum_probs=77.2
Q ss_pred CccEEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEI-AKSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEK 268 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~-a~~S~~l~~~l~~~~~~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~ 268 (351)
-..|+|+. +|+.|.+++.+ +..|++++.|+.. ....|.+++++..+++.+++|++...-
T Consensus 28 ~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~------~~~~i~l~~~~~~~f~~ll~~~Ytg~~------------- 87 (121)
T 1buo_A 28 LCDVVIMV-DSQEFHAHRTVLACTSKMFEILFHR------NSQHYTLDFLSPKTFQQILEYAYTATL------------- 87 (121)
T ss_dssp TCCEEEEE-SSCEEEECHHHHHHHCHHHHHHTTS------CCSEEEECSSCHHHHHHHHHHHHHSCC-------------
T ss_pred CCCEEEEE-CCEEEehhHHHHhhcCHHHHHHHcC------CCcEEEeCCCCHHHHHHHHHhhcCCCc-------------
Confidence 36677776 58999999998 4789999999964 255789999999999999999996421
Q ss_pred ccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHHHh
Q psy4644 269 RTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMI 315 (351)
Q Consensus 269 ~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i 315 (351)
.++.+.+.+|+.||++|++++|.+.|+.++...|
T Consensus 88 -------------~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~I 121 (121)
T 1buo_A 88 -------------QAKAEDLDDLLYAAEILEIEYLEEQCLKMLETIQ 121 (121)
T ss_dssp -------------CCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred -------------CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhC
Confidence 1344668999999999999999999999987653
No 22
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=98.58 E-value=4.5e-07 Score=72.77 Aligned_cols=91 Identities=14% Similarity=0.228 Sum_probs=75.6
Q ss_pred ceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRT 81 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~~ 81 (351)
.|+|+. +|+.|.+++.++ ..|++++.|+.. +...|.+++++..+++.+++|++...-
T Consensus 30 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~------~~~~i~l~~~~~~~f~~ll~~~Ytg~~--------------- 87 (121)
T 1buo_A 30 DVVIMV-DSQEFHAHRTVLACTSKMFEILFHR------NSQHYTLDFLSPKTFQQILEYAYTATL--------------- 87 (121)
T ss_dssp CEEEEE-SSCEEEECHHHHHHHCHHHHHHTTS------CCSEEEECSSCHHHHHHHHHHHHHSCC---------------
T ss_pred CEEEEE-CCEEEehhHHHHhhcCHHHHHHHcC------CCcEEEeCCCCHHHHHHHHHhhcCCCc---------------
Confidence 467765 689999999975 689999999974 246789999999999999999996431
Q ss_pred CccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHHHH
Q psy4644 82 DDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMI 126 (351)
Q Consensus 82 ~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i 126 (351)
.++.+.+.+|+.||++|+++.|.+.|+.++...|
T Consensus 88 -----------~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~I 121 (121)
T 1buo_A 88 -----------QAKAEDLDDLLYAAEILEIEYLEEQCLKMLETIQ 121 (121)
T ss_dssp -----------CCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred -----------CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhC
Confidence 1244668999999999999999999999987654
No 23
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.58 E-value=4.8e-07 Score=72.36 Aligned_cols=94 Identities=14% Similarity=0.178 Sum_probs=74.8
Q ss_pred CccEEEEcCCCCEEEeCHHHH-HHhHHHHHHHHhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEK 268 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a-~~S~~l~~~l~~~~~~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~ 268 (351)
-..|+|+. +|+.|.+++.++ ..|++++.|+... ..+.....|.+++++..+++.+++|++...-
T Consensus 25 ~~Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~~-~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~~------------- 89 (120)
T 2if5_A 25 LCDVVILV-EGREFPTHRSVLAACSQYFKKLFTSG-AVVDQQNVYEIDFVSAEALTALMDFAYTATL------------- 89 (120)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC------CCSEEECCSSCHHHHHHHHHHHHHSCC-------------
T ss_pred CCCeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcCC-ccccCCceEEeCCCCHHHHHHHHHHHcCCCC-------------
Confidence 46777776 589999999985 5899999999742 3233467899999999999999999996321
Q ss_pred ccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHH
Q psy4644 269 RTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 311 (351)
Q Consensus 269 ~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~v 311 (351)
.++.+.+.+|+.||++++|++|.+.|.+++
T Consensus 90 -------------~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 90 -------------TVSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp -------------CCCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -------------ccCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 134567899999999999999999998875
No 24
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.55 E-value=5.6e-07 Score=76.36 Aligned_cols=107 Identities=15% Similarity=0.163 Sum_probs=85.3
Q ss_pred ccEEEEcCCCCEEEeCHHHH-HHhHHHHHHHHhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccccc
Q psy4644 191 SAILRKSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKR 269 (351)
Q Consensus 191 ~~i~L~S~DG~~f~v~~~~a-~~S~~l~~~l~~~~~~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~~ 269 (351)
..|+|+. +|+.|.+++.++ ..|++++.|+... ..+.....|.+++++..+++.+++|++...-
T Consensus 35 ~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~~-------------- 98 (172)
T 3htm_A 35 TDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEINDVEPEVFKEMMCFIYTGKA-------------- 98 (172)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSC-CCGGGTTEEEECSSCHHHHHHHHHHHHHSCC--------------
T ss_pred cceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccC-ccccCCCeEEecCCCHHHHHHHHHHHhCCCC--------------
Confidence 5677776 689999999985 6899999999853 3333457899999999999999999996431
Q ss_pred cccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHHHhhCCCHHHHHH
Q psy4644 270 TDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRK 325 (351)
Q Consensus 270 ~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gks~eEir~ 325 (351)
.++.+.+.+|+.+|++++++.|.+.|.+++...+...+.-++..
T Consensus 99 ------------~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~ 142 (172)
T 3htm_A 99 ------------PNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILI 142 (172)
T ss_dssp ------------TTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHH
T ss_pred ------------CCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 12345688999999999999999999999988776666655543
No 25
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.53 E-value=8.1e-07 Score=71.00 Aligned_cols=92 Identities=14% Similarity=0.209 Sum_probs=72.8
Q ss_pred ceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRT 81 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~~ 81 (351)
.|+|+. +|+.|.+++.++ ..|.+++.|+... ..+.....|.+++++..+++.+++|++...-
T Consensus 27 Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~~-~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~~--------------- 89 (120)
T 2if5_A 27 DVVILV-EGREFPTHRSVLAACSQYFKKLFTSG-AVVDQQNVYEIDFVSAEALTALMDFAYTATL--------------- 89 (120)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC------CCSEEECCSSCHHHHHHHHHHHHHSCC---------------
T ss_pred CeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcCC-ccccCCceEEeCCCCHHHHHHHHHHHcCCCC---------------
Confidence 466765 689999999985 5799999999753 2233457899999999999999999996431
Q ss_pred CccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHH
Q psy4644 82 DDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 122 (351)
Q Consensus 82 ~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~v 122 (351)
.++.+.+.+|+.||++++++.|.+.|.+++
T Consensus 90 -----------~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 90 -----------TVSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp -----------CCCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -----------ccCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 134567899999999999999999998865
No 26
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=98.50 E-value=6.5e-07 Score=71.64 Aligned_cols=90 Identities=17% Similarity=0.211 Sum_probs=74.4
Q ss_pred CccEEEEcCCCCEEEeCHHHH-HHhHHHHHHHHhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEK 268 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a-~~S~~l~~~l~~~~~~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~ 268 (351)
-..|+|+. +|+.|.+++.++ ..|.+++.|+.. ....|.+++++..+++.+++|++...-
T Consensus 27 ~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~------~~~~i~l~~~~~~~f~~ll~~~Ytg~~------------- 86 (119)
T 2q81_A 27 LCDCTFVV-DGVHFKAHKAVLAACSEYFKMLFVD------QKDVVHLDISNAAGLGQVLEFMYTAKL------------- 86 (119)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHH------CCSGGGGGGCCHHHHHHHHHHHHHSCC-------------
T ss_pred CcceEEEE-CCEEEehhHHHHHHcCHHHHHHHcC------CCCEEEeCCCCHHHHHHHHHHHcCCCC-------------
Confidence 36677775 689999999985 589999999986 245788889999999999999996421
Q ss_pred ccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHH
Q psy4644 269 RTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 312 (351)
Q Consensus 269 ~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA 312 (351)
.++.+.+.+|+.||++|+|+.|.+.|+++++
T Consensus 87 -------------~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 -------------SLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp -------------CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred -------------ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 1344568999999999999999999999874
No 27
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.50 E-value=9.8e-07 Score=74.85 Aligned_cols=105 Identities=16% Similarity=0.193 Sum_probs=83.3
Q ss_pred ceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRT 81 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~~ 81 (351)
.|+|+. +|+.|.+++.++ ..|.+++.|+... ..+.....|.+++++..+++.+++|++....
T Consensus 36 Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~~--------------- 98 (172)
T 3htm_A 36 DCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEINDVEPEVFKEMMCFIYTGKA--------------- 98 (172)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSC-CCGGGTTEEEECSSCHHHHHHHHHHHHHSCC---------------
T ss_pred ceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccC-ccccCCCeEEecCCCHHHHHHHHHHHhCCCC---------------
Confidence 467776 689999999975 6799999999853 3233457899999999999999999986432
Q ss_pred CccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHHHHcCCCHHHHH
Q psy4644 82 DDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIR 135 (351)
Q Consensus 82 ~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gkt~eEiR 135 (351)
.++.+.+.+|+.+|++++++.|.+.|..++...+...+.-++.
T Consensus 99 -----------~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~ 141 (172)
T 3htm_A 99 -----------PNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEIL 141 (172)
T ss_dssp -----------TTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHH
T ss_pred -----------CCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 1234567899999999999999999999998877666655543
No 28
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.48 E-value=1.1e-06 Score=70.95 Aligned_cols=94 Identities=15% Similarity=0.288 Sum_probs=76.7
Q ss_pred CccEEEEcCCCCEEEeCHHHH-HHhHHHHHHHHhcCCCCCCCCcccC-CCCCHHHHHHHHHHHHhcCCCCCCCCCccccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPL-PNVNSAILRKVIQWATYHKDDPPPPEDDENKE 267 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a-~~S~~l~~~l~~~~~~~~~~~~Ipl-~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~ 267 (351)
-..|+|+. +|+.|.+++.++ ..|++++.|+... ..+ ....|.| ++++..+++.+++|++...-
T Consensus 29 ~~Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~-~~e-~~~~i~l~~~~~~~~f~~ll~~~Ytg~~------------ 93 (127)
T 1r29_A 29 LTDVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQ-LKR-NLSVINLDPEINPEGFNILLDFMYTSRL------------ 93 (127)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTST-TTT-TCSEEECCTTSCHHHHHHHHHHHHHSCC------------
T ss_pred CCCEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCC-ccC-CCCEEEeCCCCCHHHHHHHHHHHcCCCc------------
Confidence 46788876 589999999985 6899999999753 222 4678889 89999999999999986321
Q ss_pred cccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHH
Q psy4644 268 KRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 312 (351)
Q Consensus 268 ~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA 312 (351)
.++.+.+.+|+.||++|+++.|.+.|..++.
T Consensus 94 --------------~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 94 --------------NLREGNIMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp --------------CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred --------------CcCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 1345678999999999999999999999875
No 29
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=98.46 E-value=1.1e-06 Score=70.34 Aligned_cols=88 Identities=17% Similarity=0.252 Sum_probs=72.7
Q ss_pred ceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRT 81 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~~ 81 (351)
.|+|+. +|+.|.+++.++ ..|.+++.|+... ...|.+++++..+++.+++|++...-
T Consensus 29 Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~------~~~i~l~~~~~~~f~~ll~~~Ytg~~--------------- 86 (119)
T 2q81_A 29 DCTFVV-DGVHFKAHKAVLAACSEYFKMLFVDQ------KDVVHLDISNAAGLGQVLEFMYTAKL--------------- 86 (119)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHC------CSGGGGGGCCHHHHHHHHHHHHHSCC---------------
T ss_pred ceEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeCCCCHHHHHHHHHHHcCCCC---------------
Confidence 467765 689999999975 5799999999862 46788889999999999999996431
Q ss_pred CccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHH
Q psy4644 82 DDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 123 (351)
Q Consensus 82 ~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA 123 (351)
.++.+.+.+|+.||++|+++.|.+.|+++++
T Consensus 87 -----------~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 -----------SLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp -----------CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred -----------ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 1344568999999999999999999998874
No 30
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=98.46 E-value=1.4e-06 Score=69.23 Aligned_cols=91 Identities=14% Similarity=0.098 Sum_probs=72.9
Q ss_pred CccEEEEcCCCCEEEeCHHHH-HHhHHHHHHHHhcCCCCCCCCcccCC--CCCHHHHHHHHHHHHhcCCCCCCCCCcccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLP--NVNSAILRKVIQWATYHKDDPPPPEDDENK 266 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a-~~S~~l~~~l~~~~~~~~~~~~Ipl~--~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~ 266 (351)
-..|+|+. +|+.|.+++.++ ..|++++.|+... ....|.|+ +++..+++.+++|++...-
T Consensus 22 ~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~-----~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~----------- 84 (116)
T 2vpk_A 22 LCDCTIVI-GEFQFKAHRNVLASFSEYFGAIYRST-----SENNVFLDQSQVKADGFQKLLEFIYTGTL----------- 84 (116)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTC-----CCSCEECCTTTCCHHHHHHHHHHHHHSCC-----------
T ss_pred CCcEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCC-----CCCeEEeecCCCCHHHHHHHHHHHcCCCc-----------
Confidence 35677776 589999999985 6899999999753 23445555 9999999999999996321
Q ss_pred ccccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHH
Q psy4644 267 EKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 312 (351)
Q Consensus 267 ~~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA 312 (351)
.++.+.+.+|+.||++|++++|.+.|++++.
T Consensus 85 ---------------~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 85 ---------------NLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp ---------------CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred ---------------ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 1344578999999999999999999998873
No 31
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=98.45 E-value=4.8e-07 Score=72.42 Aligned_cols=92 Identities=14% Similarity=0.149 Sum_probs=74.0
Q ss_pred CccEEEEcCCCCEEEeCHHHH-HHhHHHHHHHHhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEK 268 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a-~~S~~l~~~l~~~~~~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~ 268 (351)
-..|+|+. +|+.|.+++.++ ..|++++.|+... ....|.+++++..+++.+++|++...-
T Consensus 24 ~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~~i~l~~~~~~~f~~ll~~iYtg~~------------- 84 (119)
T 3b84_A 24 YCDATLDV-GGLVFKAHWSVLACCSHFFQSLYGDG-----SGGSVVLPAGFAEIFGLLLDFFYTGHL------------- 84 (119)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTT-----TCCCEEECGGGHHHHHHHHHHHHHSCC-------------
T ss_pred CcceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCC-----CCCeEEeCCCCHHHHHHHHHHHcCCCC-------------
Confidence 35677776 689999999974 6899999999752 256789999999999999999996421
Q ss_pred ccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHH
Q psy4644 269 RTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 313 (351)
Q Consensus 269 ~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~ 313 (351)
.++.+.+.+|+.||++|+|++|.+.|++++..
T Consensus 85 -------------~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 85 -------------ALTSGNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp -------------CCCTTTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred -------------ccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 13345588999999999999999999987743
No 32
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.45 E-value=1.5e-06 Score=70.19 Aligned_cols=92 Identities=14% Similarity=0.274 Sum_probs=74.8
Q ss_pred ceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccC-CCCCHHHHHHHHHHHHhcCCCCCCCCCccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPL-PNVNSAILRKVIQWATYHKDDPPPPEDDENKEKR 80 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l-~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~ 80 (351)
.|+|+. +|+.|.+++.++ ..|.+++.|+..... + ....|.| ++++..+++.+++|++...-
T Consensus 31 Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~~~-e-~~~~i~l~~~~~~~~f~~ll~~~Ytg~~-------------- 93 (127)
T 1r29_A 31 DVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQLK-R-NLSVINLDPEINPEGFNILLDFMYTSRL-------------- 93 (127)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTSTTT-T-TCSEEECCTTSCHHHHHHHHHHHHHSCC--------------
T ss_pred CEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCCcc-C-CCCEEEeCCCCCHHHHHHHHHHHcCCCc--------------
Confidence 466765 589999999975 689999999985322 2 4578899 89999999999999986421
Q ss_pred cCccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHH
Q psy4644 81 TDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 123 (351)
Q Consensus 81 ~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA 123 (351)
.++.+.+.+|+.||++|+++.|.+.|..++.
T Consensus 94 ------------~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 94 ------------NLREGNIMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp ------------CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ------------CcCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 1345678999999999999999999998875
No 33
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=98.42 E-value=8.1e-07 Score=73.70 Aligned_cols=95 Identities=18% Similarity=0.275 Sum_probs=74.6
Q ss_pred CccEEEEcCCCCEEEeCHHHH-HHhHHHHHHHHhcCCC-CCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLE-DEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKE 267 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a-~~S~~l~~~l~~~~~~-~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~ 267 (351)
-..|+|+. +|+.|.+.+.++ ..|++++.|+...... +.....|.|++++..+++.+++|++.-.
T Consensus 47 ~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg~------------- 112 (144)
T 2ppi_A 47 FCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQ------------- 112 (144)
T ss_dssp CCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTSC-------------
T ss_pred CcceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCCC-------------
Confidence 35677776 689999999975 5899999999863211 1246689999999999999999998422
Q ss_pred cccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHH
Q psy4644 268 KRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 311 (351)
Q Consensus 268 ~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~v 311 (351)
+.++.+.+.+|+.||++|++++|.+.|++++
T Consensus 113 -------------~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 113 -------------IRLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp -------------CCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred -------------CCCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 1134567899999999999999999998764
No 34
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=98.41 E-value=2.4e-06 Score=67.83 Aligned_cols=89 Identities=15% Similarity=0.145 Sum_probs=71.4
Q ss_pred ceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCC--CCCHHHHHHHHHHHHhcCCCCCCCCCcccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLP--NVNSAILRKVIQWATYHKDDPPPPEDDENKEK 79 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~--~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~ 79 (351)
.|+|+. +|+.|.+++.++ ..|.+++.|+...+ ...|.++ +++..+++.+++|++.-.-
T Consensus 24 Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~~~~~~~~~f~~ll~~~Yt~~~------------- 84 (116)
T 2vpk_A 24 DCTIVI-GEFQFKAHRNVLASFSEYFGAIYRSTS-----ENNVFLDQSQVKADGFQKLLEFIYTGTL------------- 84 (116)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCC-----CSCEECCTTTCCHHHHHHHHHHHHHSCC-------------
T ss_pred cEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCCC-----CCeEEeecCCCCHHHHHHHHHHHcCCCc-------------
Confidence 466665 589999999985 68999999998641 3455555 9999999999999986421
Q ss_pred ccCccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHH
Q psy4644 80 RTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 123 (351)
Q Consensus 80 ~~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA 123 (351)
.++.+.+.+|+.||++|+++.|.+.|++++.
T Consensus 85 -------------~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 85 -------------NLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp -------------CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred -------------ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 1344568999999999999999999998763
No 35
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.40 E-value=4.8e-07 Score=73.47 Aligned_cols=92 Identities=15% Similarity=0.298 Sum_probs=70.9
Q ss_pred CccEEEEcCCCCEEEeCHHHH-HHhHHHHHHHHhcCCCCCCCCcccCC-CCCHHHHHHHHHHHHhcCCCCCCCCCccccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLP-NVNSAILRKVIQWATYHKDDPPPPEDDENKE 267 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a-~~S~~l~~~l~~~~~~~~~~~~Ipl~-~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~ 267 (351)
-..|+|+. +|+.|.+++.++ ..|.+++.|+... ....|.+| +++..+++.+++|++...
T Consensus 33 ~~Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~-----~~~~i~l~~~~~~~~f~~ll~~iYtg~------------- 93 (129)
T 3ga1_A 33 YCDVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS-----RSAVVELPAAVQPQSFQQILSFCYTGR------------- 93 (129)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC-----CCSEEECCTTCCHHHHHHHHHHHHHSE-------------
T ss_pred CcceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC-----CCCEEEECCCCCHHHHHHHHHHHhCCc-------------
Confidence 35677776 799999999975 5899999999864 35679998 899999999999998632
Q ss_pred cccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHH
Q psy4644 268 KRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 313 (351)
Q Consensus 268 ~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~ 313 (351)
+.++.+.+.+|+.||++|+|+.|.+.|++++..
T Consensus 94 -------------~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 94 -------------LSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp -------------EECCTTTHHHHHHHHHHTTBTTSSCC-------
T ss_pred -------------cccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 123455689999999999999999999998754
No 36
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=98.39 E-value=8.6e-07 Score=70.93 Aligned_cols=90 Identities=16% Similarity=0.195 Sum_probs=72.3
Q ss_pred ceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRT 81 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~~ 81 (351)
.|+|+. +|+.|.+++.++ ..|.+++.|+.... ...|.+++++..+++.+++|++...-
T Consensus 26 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~~~~~~~f~~ll~~iYtg~~--------------- 84 (119)
T 3b84_A 26 DATLDV-GGLVFKAHWSVLACCSHFFQSLYGDGS-----GGSVVLPAGFAEIFGLLLDFFYTGHL--------------- 84 (119)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTTT-----CCCEEECGGGHHHHHHHHHHHHHSCC---------------
T ss_pred ceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCCC-----CCeEEeCCCCHHHHHHHHHHHcCCCC---------------
Confidence 466665 689999999975 57999999997532 46789999999999999999996431
Q ss_pred CccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHH
Q psy4644 82 DDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 124 (351)
Q Consensus 82 ~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~ 124 (351)
.++.+.+.+|+.||++|+++.|.+.|++++..
T Consensus 85 -----------~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 85 -----------ALTSGNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp -----------CCCTTTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred -----------ccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 13345588999999999999999999987643
No 37
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=98.39 E-value=3.6e-07 Score=75.30 Aligned_cols=102 Identities=14% Similarity=0.149 Sum_probs=74.8
Q ss_pred CccEEEEcCCCCEEEeCHHHH-HHhHHHHHHHHhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEK 268 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a-~~S~~l~~~l~~~~~~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~ 268 (351)
-..|+|+. +|+.|.+++.++ ..|++++.|+... ..+.....|.+++++..+++.+++|++...-
T Consensus 25 ~~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~------------- 89 (145)
T 4eoz_A 25 FTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEINDVEPEVFKEMMCFIYTGKA------------- 89 (145)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSS-SHHHHHTEEEECSSCHHHHHHHHHHHHHSCC-------------
T ss_pred CcceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCC-CcCCCCceEEecCCCHHHHHHHHHhhccCcc-------------
Confidence 35677776 688999999985 6899999999742 2122346899999999999999999996431
Q ss_pred ccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHHHhhCCC
Q psy4644 269 RTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKT 319 (351)
Q Consensus 269 ~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gks 319 (351)
.++.+.+.+|+.+|++++++.|.+.|+.++...+...+
T Consensus 90 -------------~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n 127 (145)
T 4eoz_A 90 -------------PNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVEN 127 (145)
T ss_dssp -------------TTGGGTHHHHHHHHHHTTCHHHHHHHHCC---------
T ss_pred -------------CCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHH
Confidence 12345678999999999999999999999876654433
No 38
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=98.37 E-value=1.3e-06 Score=72.34 Aligned_cols=93 Identities=19% Similarity=0.309 Sum_probs=72.7
Q ss_pred ceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCC-CCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLE-DEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKR 80 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~-~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~ 80 (351)
.|+|+. +|+.|.+.+.++ ..|.+++.|+...... +.....|.+++++..+++.+++|++.-.-
T Consensus 49 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg~~-------------- 113 (144)
T 2ppi_A 49 DAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQI-------------- 113 (144)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTSCC--------------
T ss_pred ceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCCCC--------------
Confidence 466765 689999999975 5799999999863221 12456899999999999999999984221
Q ss_pred cCccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHH
Q psy4644 81 TDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 122 (351)
Q Consensus 81 ~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~v 122 (351)
.++.+.+.+|+.||++|+++.|.+.|++++
T Consensus 114 ------------~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 114 ------------RLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp ------------CCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred ------------CCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 234567899999999999999999998754
No 39
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.35 E-value=8.6e-07 Score=71.95 Aligned_cols=90 Identities=16% Similarity=0.342 Sum_probs=69.2
Q ss_pred ceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCC-CCCHHHHHHHHHHHHhcCCCCCCCCCccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLP-NVNSAILRKVIQWATYHKDDPPPPEDDENKEKR 80 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~-~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~ 80 (351)
.|+|+. +|+.|.+++.++ ..|.+++.|+... ....|.+| +++..+++.+++|++...
T Consensus 35 Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~-----~~~~i~l~~~~~~~~f~~ll~~iYtg~--------------- 93 (129)
T 3ga1_A 35 DVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS-----RSAVVELPAAVQPQSFQQILSFCYTGR--------------- 93 (129)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC-----CCSEEECCTTCCHHHHHHHHHHHHHSE---------------
T ss_pred ceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC-----CCCEEEECCCCCHHHHHHHHHHHhCCc---------------
Confidence 466765 799999999975 5899999999874 25779998 899999999999998632
Q ss_pred cCccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHH
Q psy4644 81 TDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 124 (351)
Q Consensus 81 ~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~ 124 (351)
+.++.+.+.+|+.||++|+++.|.+.|++++..
T Consensus 94 -----------~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 94 -----------LSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp -----------EECCTTTHHHHHHHHHHTTBTTSSCC-------
T ss_pred -----------cccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 123455689999999999999999999988754
No 40
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=98.32 E-value=6.7e-07 Score=73.67 Aligned_cols=100 Identities=15% Similarity=0.184 Sum_probs=73.0
Q ss_pred ceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRT 81 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~~ 81 (351)
.|+|+. +|+.|.+++.++ ..|.+++.|+... ..+.....|.+++++..+++.+++|++....
T Consensus 27 Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~--------------- 89 (145)
T 4eoz_A 27 DCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEINDVEPEVFKEMMCFIYTGKA--------------- 89 (145)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSS-SHHHHHTEEEECSSCHHHHHHHHHHHHHSCC---------------
T ss_pred ceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCC-CcCCCCceEEecCCCHHHHHHHHHhhccCcc---------------
Confidence 467765 688999999985 6799999999752 2111246799999999999999999997532
Q ss_pred CccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHHHHcCCC
Q psy4644 82 DDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKT 130 (351)
Q Consensus 82 ~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gkt 130 (351)
.++.+.+.+|+.+|++++++.|.+.|+.++...+...+
T Consensus 90 -----------~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n 127 (145)
T 4eoz_A 90 -----------PNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVEN 127 (145)
T ss_dssp -----------TTGGGTHHHHHHHHHHTTCHHHHHHHHCC---------
T ss_pred -----------CCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHH
Confidence 12345678999999999999999999999877654433
No 41
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=98.31 E-value=2e-06 Score=70.62 Aligned_cols=97 Identities=14% Similarity=0.166 Sum_probs=77.3
Q ss_pred CccEEEEcCCCCEEEeCHHHH-HHhHHHHHHHHhcCCCCCCCCcccCC-CCCHHHHHHHHHHHHhcCCCCCCCCCccccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLP-NVNSAILRKVIQWATYHKDDPPPPEDDENKE 267 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a-~~S~~l~~~l~~~~~~~~~~~~Ipl~-~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~ 267 (351)
-..|+|+. +|+.|.+.+.++ ..|.+++.|+.... .....|.++ +++...++.+++|++...-
T Consensus 36 ~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~---~e~~~i~l~~~v~~~~~~~lL~~~Ytg~~------------ 99 (138)
T 2z8h_A 36 LCDVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQT---DAELTVTLPEEVTVKGFEPLIQFAYTAKL------------ 99 (138)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCC---CTTEEEECCTTSCHHHHHHHHHHHHHSCC------------
T ss_pred CcCeEEEE-CCEEEechHHHHHHcCHHHHHHHhcCC---CCCceEEeCCCCCHHHHHHHHHHhcCCCc------------
Confidence 36677776 589999999985 68999999997532 123568886 8999999999999996421
Q ss_pred cccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHHHhh
Q psy4644 268 KRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 316 (351)
Q Consensus 268 ~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~ 316 (351)
.++.+.+.+|+.||++|+++.|.+.|++++...+.
T Consensus 100 --------------~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 100 --------------ILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp --------------CCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCS
T ss_pred --------------ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhcc
Confidence 13456689999999999999999999999865544
No 42
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=98.30 E-value=2.3e-06 Score=70.23 Aligned_cols=95 Identities=15% Similarity=0.185 Sum_probs=75.8
Q ss_pred ceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCC-CCCHHHHHHHHHHHHhcCCCCCCCCCccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLP-NVNSAILRKVIQWATYHKDDPPPPEDDENKEKR 80 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~-~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~ 80 (351)
.|+|+. +|+.|.+++.++ ..|.+++.|+..... +...|.++ +|+...++.+++|++.-.-
T Consensus 38 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~---e~~~i~l~~~v~~~~~~~lL~~~Ytg~~-------------- 99 (138)
T 2z8h_A 38 DVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQTD---AELTVTLPEEVTVKGFEPLIQFAYTAKL-------------- 99 (138)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCCC---TTEEEECCTTSCHHHHHHHHHHHHHSCC--------------
T ss_pred CeEEEE-CCEEEechHHHHHHcCHHHHHHHhcCCC---CCceEEeCCCCCHHHHHHHHHHhcCCCc--------------
Confidence 466765 589999999985 679999999985322 24578886 8999999999999996431
Q ss_pred cCccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHHHHc
Q psy4644 81 TDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 127 (351)
Q Consensus 81 ~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~ 127 (351)
.++.+.+.+|+.||++|+++.|.+.|++++...+.
T Consensus 100 ------------~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 100 ------------ILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp ------------CCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCS
T ss_pred ------------ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhcc
Confidence 23455689999999999999999999998866543
No 43
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=98.24 E-value=1.6e-06 Score=79.74 Aligned_cols=108 Identities=11% Similarity=0.154 Sum_probs=79.7
Q ss_pred CccEEEEcC--CCCEEEeCHHHH-HHhHHHHHHHHhcCCCCCCCCcccCC------CCCHHHHHHHHHHHHhcCCCCCCC
Q psy4644 190 NSAILRKSS--DGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLP------NVNSAILRKVIQWATYHKDDPPPP 260 (351)
Q Consensus 190 ~~~i~L~S~--DG~~f~v~~~~a-~~S~~l~~~l~~~~~~~~~~~~Ipl~------~v~~~iL~kVi~yc~~h~~~~~~~ 260 (351)
-..|+|+.. ||+.|.+++.++ ..|++++.|+.. +..+.....|.++ +++..+++.+++|++...
T Consensus 32 ~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~-~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~------ 104 (279)
T 3i3n_A 32 FCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSG-QFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGR------ 104 (279)
T ss_dssp TCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCSCHHHHHHHHHHHHHSE------
T ss_pred CCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcC-CCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCC------
Confidence 367888876 799999999985 579999999864 2323345678887 899999999999999632
Q ss_pred CCccccccccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHHHhhCCCHHHHH
Q psy4644 261 EDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIR 324 (351)
Q Consensus 261 ~~~~~~~~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gks~eEir 324 (351)
+.++.+.+.+|+.||++|++++|.+.|+.++...+...+.-.+.
T Consensus 105 --------------------~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~ 148 (279)
T 3i3n_A 105 --------------------IRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIH 148 (279)
T ss_dssp --------------------EEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHH
T ss_pred --------------------cccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHH
Confidence 11344568899999999999999999999998877666655543
No 44
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=98.23 E-value=6.2e-07 Score=72.28 Aligned_cols=89 Identities=19% Similarity=0.252 Sum_probs=71.3
Q ss_pred ceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCCC-CCHHHHHHHHHHHHhcCCCCCCCCCccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPN-VNSAILRKVIQWATYHKDDPPPPEDDENKEKR 80 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~~-v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~ 80 (351)
.|+|+. +|+.|.+++.++ ..|.+++.|+..... +...|.+++ ++..+++.+++|++...
T Consensus 34 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~---e~~~i~l~~~~~~~~f~~~l~~iYtg~--------------- 94 (125)
T 3ohu_A 34 DVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQTK---NDLVVSLPEEVTARGFGPLLQFAYTAK--------------- 94 (125)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCCC---SSCEEECCTTCCHHHHHHHHHHHTTSE---------------
T ss_pred ceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCCC---CCcEEEeCCCCCHHHHHHHHHhHcCCc---------------
Confidence 467775 689999999975 579999999986432 256789998 99999999999998421
Q ss_pred cCccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHH
Q psy4644 81 TDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 121 (351)
Q Consensus 81 ~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~ 121 (351)
+.++.+.+.+|+.||++|+++.|.+.|+++
T Consensus 95 -----------~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~ 124 (125)
T 3ohu_A 95 -----------LLLSRENIREVIRCAEFLRMHNLEDSCFSF 124 (125)
T ss_dssp -----------EEECTTTHHHHHHHHHHHTBSSCTTSSCCC
T ss_pred -----------eEECHHHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 123556689999999999999999988653
No 45
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=98.23 E-value=2.7e-06 Score=77.16 Aligned_cols=105 Identities=17% Similarity=0.227 Sum_probs=75.6
Q ss_pred CccEEEEcCCCCEEEeCHHHHH-HhHHHHHHHHhcCCC-CCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIAK-SSVTIKTMVEDLGLE-DEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKE 267 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a~-~S~~l~~~l~~~~~~-~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~ 267 (351)
-..|+|+. +|+.|.+++.++. .|++++.|+...... +.....|++++++..+++.+++|++...-
T Consensus 31 ~~Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt~~~------------ 97 (256)
T 3hve_A 31 FCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQI------------ 97 (256)
T ss_dssp CCCEEEEE-TTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHHSCC------------
T ss_pred CcceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccCCCC------------
Confidence 35677776 6899999999864 799999999743211 23456899999999999999999996431
Q ss_pred cccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHHHhhCCCHH
Q psy4644 268 KRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPE 321 (351)
Q Consensus 268 ~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gks~e 321 (351)
.++.+.+.+|+.||++|+++.|.+.|+.++...+.-.+.-
T Consensus 98 --------------~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~ 137 (256)
T 3hve_A 98 --------------RLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCI 137 (256)
T ss_dssp --------------CCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTH
T ss_pred --------------cccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHH
Confidence 1334558888999999999999999988887765544433
No 46
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=98.22 E-value=2.5e-06 Score=78.40 Aligned_cols=108 Identities=12% Similarity=0.166 Sum_probs=80.6
Q ss_pred CceEEEcC--CCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCC------CCCHHHHHHHHHHHHhcCCCCCCCC
Q psy4644 2 PNIKLQSS--DGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLP------NVNSAILRKVIQWATYHKDDPPPPE 72 (351)
Q Consensus 2 ~~i~L~S~--DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~------~v~s~~L~~Iie~c~~h~~~~~~~~ 72 (351)
..|+|+.. ||+.|.+++.++ ..|.+++.|+.. +..+.....|.++ +|+..+++.+++|++...-
T Consensus 33 ~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~-~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~------ 105 (279)
T 3i3n_A 33 CDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSG-QFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRI------ 105 (279)
T ss_dssp CCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCSCHHHHHHHHHHHHHSEE------
T ss_pred CCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcC-CCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCc------
Confidence 34778776 799999999985 579999999964 2323345678887 8999999999999986321
Q ss_pred CccccccccCccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHHHHcCCCHHHHHh
Q psy4644 73 DDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRK 136 (351)
Q Consensus 73 ~~~~~~~~~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gkt~eEiR~ 136 (351)
.++.+.+.+|+.||++|+++.|.+.|+.++...+...+.-.+..
T Consensus 106 --------------------~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~ 149 (279)
T 3i3n_A 106 --------------------RVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHS 149 (279)
T ss_dssp --------------------EEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHH
T ss_pred --------------------ccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHH
Confidence 23445689999999999999999999999998877666655543
No 47
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=98.21 E-value=6e-07 Score=72.39 Aligned_cols=91 Identities=18% Similarity=0.198 Sum_probs=72.8
Q ss_pred CccEEEEcCCCCEEEeCHHHH-HHhHHHHHHHHhcCCCCCCCCcccCCC-CCHHHHHHHHHHHHhcCCCCCCCCCccccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPN-VNSAILRKVIQWATYHKDDPPPPEDDENKE 267 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a-~~S~~l~~~l~~~~~~~~~~~~Ipl~~-v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~ 267 (351)
-..|+|+. +|+.|.+++.++ ..|.+++.|+..... ....|.+++ ++..+++.+++|++...
T Consensus 32 ~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~---e~~~i~l~~~~~~~~f~~~l~~iYtg~------------- 94 (125)
T 3ohu_A 32 LCDVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQTK---NDLVVSLPEEVTARGFGPLLQFAYTAK------------- 94 (125)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCCC---SSCEEECCTTCCHHHHHHHHHHHTTSE-------------
T ss_pred ccceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCCC---CCcEEEeCCCCCHHHHHHHHHhHcCCc-------------
Confidence 35678876 689999999984 689999999975321 256788998 99999999999998421
Q ss_pred cccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHH
Q psy4644 268 KRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310 (351)
Q Consensus 268 ~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~ 310 (351)
+.++.+.+.+|+.||++|+|+.|.+.|+++
T Consensus 95 -------------~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~ 124 (125)
T 3ohu_A 95 -------------LLLSRENIREVIRCAEFLRMHNLEDSCFSF 124 (125)
T ss_dssp -------------EEECTTTHHHHHHHHHHHTBSSCTTSSCCC
T ss_pred -------------eEECHHHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 123456789999999999999999988653
No 48
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=98.20 E-value=4.3e-06 Score=75.78 Aligned_cols=106 Identities=20% Similarity=0.299 Sum_probs=78.2
Q ss_pred ceEEEcCCCCEEEecHHHHH-HhHHHHHhHhhcCC-CCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIAK-SSVTIKTMVEDLGL-EDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKR 80 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a~-~S~~i~~~l~~~~~-~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~ 80 (351)
.|+|+. +|+.|.+++.++. .|.+++.|+..... .+.....|.+++++..+++.+++|++...-
T Consensus 33 Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt~~~-------------- 97 (256)
T 3hve_A 33 DAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQI-------------- 97 (256)
T ss_dssp CEEEEE-TTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHHSCC--------------
T ss_pred ceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccCCCC--------------
Confidence 466665 6899999999865 69999999975321 122456899999999999999999996432
Q ss_pred cCccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHHHHcCCCHHHHH
Q psy4644 81 TDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIR 135 (351)
Q Consensus 81 ~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gkt~eEiR 135 (351)
.++.+.+.+|+.||++|+++.|.+.|+.++...+.-.+.-.+.
T Consensus 98 ------------~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~ 140 (256)
T 3hve_A 98 ------------RLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIR 140 (256)
T ss_dssp ------------CCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHH
T ss_pred ------------cccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHH
Confidence 1344568999999999999999999999998876555544443
No 49
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=98.12 E-value=2.3e-06 Score=68.62 Aligned_cols=86 Identities=12% Similarity=0.142 Sum_probs=69.4
Q ss_pred ccEEEEcCCCCEEEeCHHHH-HHhHHHHHHHHhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccccc
Q psy4644 191 SAILRKSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKR 269 (351)
Q Consensus 191 ~~i~L~S~DG~~f~v~~~~a-~~S~~l~~~l~~~~~~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~~ 269 (351)
..|+|+. +|+.|.+++.++ ..|.+++. ....|.+++|+..+++.+++|++.-.
T Consensus 31 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~----------~~~~i~l~~v~~~~f~~ll~fiYtg~--------------- 84 (119)
T 3m5b_A 31 CDTLITV-GSQEFPAHSLVLAGVSQQLGR----------RGQWALGEGISPSTFAQLLNFVYGES--------------- 84 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHTTCGGGCC----------CEEEECCSSCCHHHHHHHHHHHTTCC---------------
T ss_pred cceEEEE-CCEEEeeEHHHHHHcCHHHhc----------CCCEEEeCCCCHHHHHHHHHHHcCCC---------------
Confidence 5678776 699999999985 56888763 24568899999999999999998421
Q ss_pred cccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHH
Q psy4644 270 TDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 313 (351)
Q Consensus 270 ~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~ 313 (351)
+.++.+.+.+|+.||++|+|+.|.+.|++++.+
T Consensus 85 -----------~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 85 -----------VELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp -----------EEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred -----------cCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 124567799999999999999999999998754
No 50
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=98.12 E-value=1.2e-05 Score=75.02 Aligned_cols=107 Identities=16% Similarity=0.178 Sum_probs=82.7
Q ss_pred CccEEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEI-AKSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEK 268 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~-a~~S~~l~~~l~~~~~~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~ 268 (351)
...|+|+. +|+.|.+++.+ |.+|++++.|+.. +..+.....|.|++++..+++.+++|++...-
T Consensus 174 ~~Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~-~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~------------- 238 (312)
T 3hqi_A 174 FTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEH-EMEESKKNRVEINDVEPEVFKEMMCFIYTGKA------------- 238 (312)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC------CCSEEEECSSCHHHHHHHHHHHHHSCC-------------
T ss_pred CCceEEEE-CCEEEeHHHHHHHHcCHHHHHHhcc-CccccCCceEEecCCCHHHHHHHHHhhcCCCC-------------
Confidence 45677777 68999999997 4689999999964 23333567899999999999999999986321
Q ss_pred ccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHHHhhCCCHHHHH
Q psy4644 269 RTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIR 324 (351)
Q Consensus 269 ~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gks~eEir 324 (351)
.++...+.+|+.||++++++.|...|...+...+...+.-++.
T Consensus 239 -------------~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l 281 (312)
T 3hqi_A 239 -------------PNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEIL 281 (312)
T ss_dssp -------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHH
T ss_pred -------------CChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHH
Confidence 1123678999999999999999999999998766666655543
No 51
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=98.10 E-value=2.8e-06 Score=68.12 Aligned_cols=86 Identities=10% Similarity=0.135 Sum_probs=68.3
Q ss_pred CceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccccc
Q psy4644 2 PNIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKR 80 (351)
Q Consensus 2 ~~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~ 80 (351)
..|+|+. +|+.|.+++.++ ..|.+++. ....|.+++|+..+++.+++|++.-.
T Consensus 31 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~----------~~~~i~l~~v~~~~f~~ll~fiYtg~--------------- 84 (119)
T 3m5b_A 31 CDTLITV-GSQEFPAHSLVLAGVSQQLGR----------RGQWALGEGISPSTFAQLLNFVYGES--------------- 84 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHTTCGGGCC----------CEEEECCSSCCHHHHHHHHHHHTTCC---------------
T ss_pred cceEEEE-CCEEEeeEHHHHHHcCHHHhc----------CCCEEEeCCCCHHHHHHHHHHHcCCC---------------
Confidence 3467765 699999999975 46888763 24568899999999999999998421
Q ss_pred cCccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHH
Q psy4644 81 TDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 124 (351)
Q Consensus 81 ~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~ 124 (351)
+.++.+.+.+|+.||++|+|+.|.+.|++++.+
T Consensus 85 -----------~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 85 -----------VELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp -----------EEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred -----------cCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 134667789999999999999999999998754
No 52
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=98.06 E-value=1.8e-05 Score=73.67 Aligned_cols=105 Identities=16% Similarity=0.193 Sum_probs=80.5
Q ss_pred ceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRT 81 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~~ 81 (351)
.|+|.. +|+.|.+++.++ .+|++++.|+... ..+.....|.|++++..+++.+++|++....
T Consensus 176 Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~~-~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~--------------- 238 (312)
T 3hqi_A 176 DCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEINDVEPEVFKEMMCFIYTGKA--------------- 238 (312)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC------CCSEEEECSSCHHHHHHHHHHHHHSCC---------------
T ss_pred ceEEEE-CCEEEeHHHHHHHHcCHHHHHHhccC-ccccCCceEEecCCCHHHHHHHHHhhcCCCC---------------
Confidence 466665 789999999975 6899999999742 3233457899999999999999999986421
Q ss_pred CccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHHHHcCCCHHHHH
Q psy4644 82 DDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIR 135 (351)
Q Consensus 82 ~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gkt~eEiR 135 (351)
.++...+.+|+.||++++++.|..+|...+...+...+.-++.
T Consensus 239 -----------~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l 281 (312)
T 3hqi_A 239 -----------PNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEIL 281 (312)
T ss_dssp -----------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHH
T ss_pred -----------CChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHH
Confidence 1123678999999999999999999999988766555554443
No 53
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=98.02 E-value=1.4e-05 Score=63.59 Aligned_cols=84 Identities=18% Similarity=0.207 Sum_probs=68.3
Q ss_pred CccEEEEcCCCCEEEeCHHHH-HHhHHHHHHHHhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEK 268 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a-~~S~~l~~~l~~~~~~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~ 268 (351)
-..|+|+. +|+.|.+.+.++ ..|++++.|+... ...|.+++++..+++.+++|++.-.-
T Consensus 31 ~~Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~------~~~i~l~~~~~~~f~~~l~~~Ytg~~------------- 90 (116)
T 3fkc_A 31 FCDVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA------GQVVELSFIRAEIFAEILNYIYSSKI------------- 90 (116)
T ss_dssp TCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC------CSEEEECSSCHHHHHHHHHHHTTSCC-------------
T ss_pred ceeEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeCCCCHHHHHHHHHhhcCCCc-------------
Confidence 35677776 689999999975 6899999999642 56789999999999999999984221
Q ss_pred ccccccchhhhhhcCChHHHHHHHHhhhccCchhHHH
Q psy4644 269 RTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLD 305 (351)
Q Consensus 269 ~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~ 305 (351)
+ .++.+.+.+|+.||++|+|++|.+
T Consensus 91 -----~-------~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 91 -----V-------RVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp -----C-------SCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred -----C-------CCCHHHHHHHHHHHHHhCccccCc
Confidence 0 245677999999999999999975
No 54
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=98.00 E-value=4.4e-06 Score=67.25 Aligned_cols=90 Identities=14% Similarity=0.212 Sum_probs=70.7
Q ss_pred ceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCC-CCCHHHHHHHHHHHHhcCCCCCCCCCccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLP-NVNSAILRKVIQWATYHKDDPPPPEDDENKEKR 80 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~-~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~ 80 (351)
.|+|+. +|+.|.+++.++ ..|.+++.|+..... +...|.+| +|+...++.+++|++...-
T Consensus 31 Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~~~---e~~~i~l~~~v~~~~f~~lL~~iYtg~~-------------- 92 (124)
T 2ihc_A 31 DVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQAD---GELNITLPEEVTVKGFEPLIQFAYTAKL-------------- 92 (124)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC------CEEEECCTTSCHHHHHHHHHHHHHSEE--------------
T ss_pred CEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCCCC---CCceEeecCCcCHHHHHHHHHHhcCCCc--------------
Confidence 466665 589999999975 589999999985321 23578885 8999999999999996321
Q ss_pred cCccchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHH
Q psy4644 81 TDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 122 (351)
Q Consensus 81 ~~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~v 122 (351)
.++.+.+.+|+.||++|+++.|.+.|++++
T Consensus 93 ------------~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 93 ------------ILSKENVDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp ------------EEETTTHHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred ------------ccCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 234556899999999999999999998654
No 55
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=97.98 E-value=4.1e-06 Score=67.41 Aligned_cols=92 Identities=15% Similarity=0.215 Sum_probs=72.3
Q ss_pred CccEEEEcCCCCEEEeCHHHH-HHhHHHHHHHHhcCCCCCCCCcccCC-CCCHHHHHHHHHHHHhcCCCCCCCCCccccc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLP-NVNSAILRKVIQWATYHKDDPPPPEDDENKE 267 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a-~~S~~l~~~l~~~~~~~~~~~~Ipl~-~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~ 267 (351)
-..|+|+. +|+.|.+.+.++ ..|++++.|+.... .....|.+| +|+...++.+++|++...
T Consensus 29 ~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~~---~e~~~i~l~~~v~~~~f~~lL~~iYtg~------------- 91 (124)
T 2ihc_A 29 LCDVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQA---DGELNITLPEEVTVKGFEPLIQFAYTAK------------- 91 (124)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC------CEEEECCTTSCHHHHHHHHHHHHHSE-------------
T ss_pred CcCEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCCC---CCCceEeecCCcCHHHHHHHHHHhcCCC-------------
Confidence 35677776 589999999985 68999999997532 123568886 899999999999999632
Q ss_pred cccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHH
Q psy4644 268 KRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 311 (351)
Q Consensus 268 ~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~v 311 (351)
+.++.+.+.+|+.||++|+++.|.+.|++++
T Consensus 92 -------------~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 92 -------------LILSKENVDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp -------------EEEETTTHHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred -------------cccCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 1134566899999999999999999998764
No 56
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=97.97 E-value=2.2e-05 Score=62.45 Aligned_cols=82 Identities=18% Similarity=0.256 Sum_probs=66.6
Q ss_pred ceEEEcCCCCEEEecHHHH-HHhHHHHHhHhhcCCCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcccccccc
Q psy4644 3 NIKLQSSDGEIFNVDFEIA-KSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRT 81 (351)
Q Consensus 3 ~i~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~~ 81 (351)
.|+|+. +|+.|.+++.++ ..|.+++.|+... ...|.+++++..+++.+++|++.-.-
T Consensus 33 Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~------~~~i~l~~~~~~~f~~~l~~~Ytg~~--------------- 90 (116)
T 3fkc_A 33 DVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA------GQVVELSFIRAEIFAEILNYIYSSKI--------------- 90 (116)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC------CSEEEECSSCHHHHHHHHHHHTTSCC---------------
T ss_pred eEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeCCCCHHHHHHHHHhhcCCCc---------------
Confidence 466765 689999999975 6899999999752 46789999999999999999985321
Q ss_pred CccchhHHHhccCChhHHHHHHHHhhhcCchhHHH
Q psy4644 82 DDISSWDADFLKVDQGTLFELILAANYLDIKGLLD 116 (351)
Q Consensus 82 ~~~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~ 116 (351)
+ .++.+.+.+|+.||++|+|+.|.+
T Consensus 91 ---~-------~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 91 ---V-------RVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp ---C-------SCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred ---C-------CCCHHHHHHHHHHHHHhCccccCc
Confidence 0 245677899999999999999875
No 57
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=82.16 E-value=10 Score=28.74 Aligned_cols=97 Identities=8% Similarity=0.111 Sum_probs=64.1
Q ss_pred CccEEEEcCCCCEEEeCHHHHHHh--HHHHHHHHhcC-C--CCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIAKSS--VTIKTMVEDLG-L--EDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDE 264 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a~~S--~~l~~~l~~~~-~--~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~ 264 (351)
+..|+|-- .|+.|.+....+..- ..+..|+.... . .....+.+=+ +-++..++.|+.|+...+-. .
T Consensus 5 ~~~v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~-~------ 75 (107)
T 3drz_A 5 SKWVRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLV-I------ 75 (107)
T ss_dssp CCEEEEEE-TTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCC-C------
T ss_pred CCEEEEEE-CCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeC-C------
Confidence 45566554 499999999987542 46777875321 1 0112334444 67999999999999975321 1
Q ss_pred ccccccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHH
Q psy4644 265 NKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 313 (351)
Q Consensus 265 ~~~~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~ 313 (351)
+. .+. ...++..|.|.+|.+|+++|-..|..
T Consensus 76 ---------p~------~~~---~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 76 ---------NK------DLA---EEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp ---------CT------TSC---HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred ---------CC------CCC---HHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 10 111 24678999999999999999877653
No 58
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=78.26 E-value=8 Score=29.40 Aligned_cols=90 Identities=9% Similarity=0.124 Sum_probs=59.8
Q ss_pred CCCCEEEecHHHHHH-h-HHHHHhHhhcC-C--CCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccccccCc
Q psy4644 9 SDGEIFNVDFEIAKS-S-VTIKTMVEDLG-L--EDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRTDD 83 (351)
Q Consensus 9 ~DG~~f~v~~~~a~~-S-~~i~~~l~~~~-~--~~~~~~~I~l~~v~s~~L~~Iie~c~~h~~~~~~~~~~~~~~~~~~~ 83 (351)
=.|+.|.++...+.. . ..+..|+.... . ..+..+.+-+ +-++..++.|+.|+...+-.-+
T Consensus 12 VGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p-------------- 76 (107)
T 3drz_A 12 VGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVIN-------------- 76 (107)
T ss_dssp ETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCC--------------
T ss_pred ECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCC--------------
Confidence 359999999988754 2 35667765321 1 0112344545 7899999999999997542111
Q ss_pred cchhHHHhccCChhHHHHHHHHhhhcCchhHHHHHHHHHHH
Q psy4644 84 ISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 124 (351)
Q Consensus 84 ~~~wD~~Fl~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~ 124 (351)
. .+. ...++..|.|.+|.+|++++-..|..
T Consensus 77 --~------~~~---~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 77 --K------DLA---EEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp --T------TSC---HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred --C------CCC---HHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 0 111 24578899999999999999876643
No 59
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=43.82 E-value=37 Score=29.04 Aligned_cols=98 Identities=8% Similarity=0.104 Sum_probs=63.1
Q ss_pred CccEEEEcCCCCEEEeCHHHHHHh--HHHHHHHHhcC-CC--CCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCcc
Q psy4644 190 NSAILRKSSDGEIFNVDFEIAKSS--VTIKTMVEDLG-LE--DEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDE 264 (351)
Q Consensus 190 ~~~i~L~S~DG~~f~v~~~~a~~S--~~l~~~l~~~~-~~--~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~ 264 (351)
+..|+|-= .|+.|.+....+..- ..|..|+.... .. .+..+.+=+ +-++..++.|+.|+...+-. .
T Consensus 11 ~~~V~LNV-GG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~-l------ 81 (202)
T 3drx_A 11 SKWVRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLV-I------ 81 (202)
T ss_dssp CCEEEEEE-TTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCC-C------
T ss_pred CCEEEEEE-CCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccC-C------
Confidence 45555544 599999998876542 35667764321 11 112334434 67899999999999974311 1
Q ss_pred ccccccccccchhhhhhcCChHHHHHHHHhhhccCchhHHHHHHHHHHHH
Q psy4644 265 NKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 314 (351)
Q Consensus 265 ~~~~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~ 314 (351)
+. .+. ...++..|.|.+|.+|+++|-..+..+
T Consensus 82 ---------P~------~~~---~~~l~eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 82 ---------NK------DLA---EEGVLEEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp ---------CT------TSC---HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ---------CC------CCC---HHHHHHHHHHCCcHHHHHHHHHHHHHH
Confidence 10 111 235889999999999999999888654
No 60
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=43.23 E-value=26 Score=26.34 Aligned_cols=35 Identities=11% Similarity=0.451 Sum_probs=27.5
Q ss_pred HHHHHHhhCCCHHHHHHHcC------CC-CCCCHHHHHHHHH
Q psy4644 309 KTVANMIKGKTPEEIRKTFN------IK-NDFTQAEEEQVRK 343 (351)
Q Consensus 309 ~~vA~~i~gks~eEir~~f~------i~-~d~t~eee~~i~~ 343 (351)
..||..+.|+|+.+.|..+. |. ..+|+||++.|.+
T Consensus 25 ~~Ia~~~~~Rt~~qcr~Rw~~~L~p~i~~~~WT~eEd~~L~~ 66 (107)
T 2k9n_A 25 IRISQLMITRNPRQCRERWNNYINPALRTDPWSPEEDMLLDQ 66 (107)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHSSSCCTTCCCCHHHHHHHHH
T ss_pred HHHhhhcCCCCHHHHHHHHHHHHcccccccccCHHHHHHHHH
Confidence 46788888999999998742 33 4699999988875
No 61
>2xf7_A GP23.1; viral protein; 1.61A {Bacillus phage SPP1} PDB: 2xf5_A 2xf6_A
Probab=38.85 E-value=32 Score=21.79 Aligned_cols=34 Identities=26% Similarity=0.522 Sum_probs=26.3
Q ss_pred HHhhCC-CHHHHHHHcCCCCCCCHHHHHHHHHhcccc
Q psy4644 313 NMIKGK-TPEEIRKTFNIKNDFTQAEEEQVRKENEWC 348 (351)
Q Consensus 313 ~~i~gk-s~eEir~~f~i~~d~t~eee~~i~~e~~W~ 348 (351)
.+..|. +.++||+.-+- .|+|++|..+|. ++||-
T Consensus 13 ~W~~GT~~~~~mR~AV~~-G~iTQ~E~D~I~-~ypwg 47 (51)
T 2xf7_A 13 SWLDGTASEELLRVAVNA-GDLTQEEADKIM-SYPWG 47 (51)
T ss_dssp HHHHTCCCHHHHHHHHHH-TSSCHHHHHHHH-TSCTT
T ss_pred HHhcchhhHHHHHHHHhc-CcccHHHHHHHH-hCccc
Confidence 456674 78999988765 589999999884 67884
No 62
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=37.37 E-value=24 Score=26.34 Aligned_cols=36 Identities=19% Similarity=0.493 Sum_probs=27.7
Q ss_pred HHHHHHhhCCCHHHHHHHcC------CC-CCCCHHHHHHHHHh
Q psy4644 309 KTVANMIKGKTPEEIRKTFN------IK-NDFTQAEEEQVRKE 344 (351)
Q Consensus 309 ~~vA~~i~gks~eEir~~f~------i~-~d~t~eee~~i~~e 344 (351)
..||..+.|+|+.++|..+. +. ..+|+||++.|.+-
T Consensus 28 ~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~~~Wt~eEd~~L~~~ 70 (105)
T 1gv2_A 28 SVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQA 70 (105)
T ss_dssp HHHHTTSTTCCHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHHH
T ss_pred HHHhhhhcCCCHHHHHHHHHhccCCcccccCCCHHHHHHHHHH
Confidence 46778888999999998753 22 36999999888753
No 63
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=34.85 E-value=40 Score=25.27 Aligned_cols=40 Identities=13% Similarity=0.510 Sum_probs=29.6
Q ss_pred HHHHHHHcCCCHHHHHhHcC------CC-CCCChHHHHHHHhh-----hhhh
Q psy4644 120 KTVANMIKGKTPEEIRKTFN------IK-NDFTQAEEEQVRKE-----NEWC 159 (351)
Q Consensus 120 ~~vA~~i~gkt~eEiR~~f~------i~-~d~t~eEe~~i~~e-----~~w~ 159 (351)
..||..+.|+|+.+.|+.+. |. ..+|+||.+.+... +.|.
T Consensus 25 ~~Ia~~~~~Rt~~qcr~Rw~~~L~p~i~~~~WT~eEd~~L~~~~~~~G~~W~ 76 (107)
T 2k9n_A 25 IRISQLMITRNPRQCRERWNNYINPALRTDPWSPEEDMLLDQKYAEYGPKWN 76 (107)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHSSSCCTTCCCCHHHHHHHHHHHHHTCSCHH
T ss_pred HHHhhhcCCCCHHHHHHHHHHHHcccccccccCHHHHHHHHHHHHHhCcCHH
Confidence 46788888999999998642 33 46999998877553 4565
No 64
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=33.95 E-value=8.4 Score=21.41 Aligned_cols=12 Identities=42% Similarity=0.659 Sum_probs=9.7
Q ss_pred HHHHHHhhhccC
Q psy4644 288 LFELILAANYLD 299 (351)
Q Consensus 288 l~~Ll~AA~~L~ 299 (351)
+--|+.||.||+
T Consensus 5 vq~LLeAAeyLE 16 (26)
T 1pd7_B 5 IQMLLEAADYLE 16 (26)
T ss_dssp THHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 456889999986
No 65
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=32.08 E-value=45 Score=25.86 Aligned_cols=36 Identities=19% Similarity=0.484 Sum_probs=28.0
Q ss_pred HHHHHHHhhCCCHHHHHHHcC------CC-CCCCHHHHHHHHH
Q psy4644 308 CKTVANMIKGKTPEEIRKTFN------IK-NDFTQAEEEQVRK 343 (351)
Q Consensus 308 ~~~vA~~i~gks~eEir~~f~------i~-~d~t~eee~~i~~ 343 (351)
=..||..+.|+|..++|..+. +. ..+|+||++.|.+
T Consensus 50 W~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~~~WT~eEd~~L~~ 92 (128)
T 1h8a_C 50 WSDIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQ 92 (128)
T ss_dssp HHHHHHHSSSCCHHHHHHHHHHTTCSSSCCSCCCHHHHHHHHH
T ss_pred HHHHHHHhcCCcHHHHHHHHHHhcccccccccCCHHHHHHHHH
Confidence 356788889999999998753 33 3699999988765
No 66
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=31.99 E-value=27 Score=24.73 Aligned_cols=39 Identities=18% Similarity=0.281 Sum_probs=24.4
Q ss_pred hhHHHHHHHHhhhcCchhHHHHHHHHHHHHHcCCCHHHHHhHc
Q psy4644 96 QGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTF 138 (351)
Q Consensus 96 ~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gkt~eEiR~~f 138 (351)
.+.+|+-..|..-.+-+.-. ..||..+-|||++|+++.|
T Consensus 15 E~k~fe~ALa~~~~~tp~rW----e~IA~~V~gKT~eE~~~hY 53 (73)
T 1wgx_A 15 ELQKLHCAFASLPKHKPGFW----SEVAAAVGSRSPEECQRKY 53 (73)
T ss_dssp HHHHHHHHHHHSCSSSSSHH----HHHHHHTTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCccHH----HHHHHHcCCCCHHHHHHHH
Confidence 34455544444333333322 5688888999999998754
No 67
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=29.38 E-value=34 Score=24.02 Aligned_cols=18 Identities=11% Similarity=0.394 Sum_probs=13.9
Q ss_pred HHHHHHHcCCCHHHHHhHc
Q psy4644 120 KTVANMIKGKTPEEIRKTF 138 (351)
Q Consensus 120 ~~vA~~i~gkt~eEiR~~f 138 (351)
..||..+ |+|++|+++.|
T Consensus 35 ~~IA~~l-gRt~~eV~~~y 52 (72)
T 2cqq_A 35 EKIAHEL-GRSVTDVTTKA 52 (72)
T ss_dssp HHHHHHH-TSCHHHHHHHH
T ss_pred HHHHHHh-CCCHHHHHHHH
Confidence 4566666 99999999864
No 68
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=28.60 E-value=34 Score=24.17 Aligned_cols=40 Identities=18% Similarity=0.256 Sum_probs=24.0
Q ss_pred hHHHHHHHHhhhccCchhHHHHHHHHHHHHhhCCCHHHHHHHcC
Q psy4644 285 QGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFN 328 (351)
Q Consensus 285 ~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gks~eEir~~f~ 328 (351)
.+.+|+-..|..=.+-+.-. ..||..+-|||++|+++.|.
T Consensus 15 E~k~fe~ALa~~~~~tp~rW----e~IA~~V~gKT~eE~~~hY~ 54 (73)
T 1wgx_A 15 ELQKLHCAFASLPKHKPGFW----SEVAAAVGSRSPEECQRKYM 54 (73)
T ss_dssp HHHHHHHHHHHSCSSSSSHH----HHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCccHH----HHHHHHcCCCCHHHHHHHHH
Confidence 33444444443333333333 46788888999999987653
No 69
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=27.52 E-value=15 Score=26.13 Aligned_cols=46 Identities=33% Similarity=0.577 Sum_probs=31.7
Q ss_pred cCChhHHHHHHHHhhhcCchhHHHHHHHHHHHHHcCCCHHHHHhHcCCCC
Q psy4644 93 KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKN 142 (351)
Q Consensus 93 ~~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gkt~eEiR~~f~i~~ 142 (351)
.-..+.+|+-..|..--+-+.-. ..||..+-|||++|+++.+.++.
T Consensus 24 T~eE~K~FE~ALa~yp~~tpdRW----ekIA~~VpGKT~eEVk~hY~~~~ 69 (74)
T 4eef_G 24 KFSENIAFEIALSFTNKDTPDRW----KKVAQYVKGRTPEEVKKHYELEH 69 (74)
T ss_dssp CTTHHHHHHHHTSSSCSSCCSSS----TTTGGGSCSSCHHHHHGGGC---
T ss_pred CHHHHHHHHHHHHHCCCCCCcHH----HHHHHHcCCCCHHHHHHHHHHhh
Confidence 44677788887777655544333 45788888999999999987753
No 70
>3tnt_A SARS coronavirus main protease; 3C-like protease, hydrolase-hydrolase inhibitor CO; HET: G85; 1.59A {Sars coronavirus} PDB: 1uk2_A 1uk3_A 1uk4_A 1z1i_A 2a5a_A 1uj1_A* 2bx3_A 2bx4_A 2c3s_A 2a5i_A 2gt7_A* 2gx4_A* 2gz7_A* 2gz8_A* 2gz9_A 2duc_A 2hob_A* 2v6n_A* 2z3c_A* 2z3d_A* ...
Probab=26.78 E-value=33 Score=30.72 Aligned_cols=103 Identities=12% Similarity=0.135 Sum_probs=61.2
Q ss_pred cccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccccccccccccchhh--hhhcCChH--HHHHHHHhhhccCchhHHHHH
Q psy4644 232 IVPLPNVNSAILRKVIQWATYHKDDPPPPEDDENKEKRTDDISSWDA--DFLKVDQG--TLFELILAANYLDIKGLLDVT 307 (351)
Q Consensus 232 ~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~~~~~~~~~~~wD~--~F~~~~~~--~l~~Ll~AA~~L~I~~L~~l~ 307 (351)
...++.-+--.-.-|+.|++-+--....=-..+ .....++..+|-. .|-.+..+ ..+..|.|..=-.+..|+...
T Consensus 190 ~~Q~~~~d~~~T~NVvAwLYAAilng~~Wfl~~-~~~sv~dfN~WA~~ngft~~~~~~~~~~~~Laa~TGVsVe~lL~aI 268 (306)
T 3tnt_A 190 TAQAAGTDTTITLNVLAWLYAAVINGDRWFLNR-FTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAAL 268 (306)
T ss_dssp SCCCCCCCCBCHHHHHHHHHHHHHTTCCTTCCS-CCCCHHHHHHHHHHTTBCCCCHHHHHHTHHHHHHHTCCHHHHHHHH
T ss_pred hhhccCccceeehhHHHHHHHHHhcCCeEEeec-cEecHHHHHHHHHhcCCccccccHHHHHHHHHHHhCCCHHHHHHHH
Confidence 334444444445667888875432111000000 0011234556632 24345554 358999999999999999887
Q ss_pred HHHHHHHhhCCCHHHHHHHcCCCCCCCHHHH
Q psy4644 308 CKTVANMIKGKTPEEIRKTFNIKNDFTQAEE 338 (351)
Q Consensus 308 ~~~vA~~i~gks~eEir~~f~i~~d~t~eee 338 (351)
-+.+++=+.|++ |--...++++|||+|-
T Consensus 269 ~~ll~~g~~G~~---IlG~~~leDE~Tp~~V 296 (306)
T 3tnt_A 269 KELLQNGMNGRT---ILGSTILEDEFTPFDV 296 (306)
T ss_dssp HHHHHHCCTTCC---BTTBSSCCCSCCHHHH
T ss_pred HHHHhcCcCCce---eeccccccccCCHHHH
Confidence 776776667777 6666678889999874
No 71
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=25.72 E-value=43 Score=25.97 Aligned_cols=36 Identities=17% Similarity=0.341 Sum_probs=28.1
Q ss_pred HHHHHHHhhCCCHHHHHHHcC------CC-CCCCHHHHHHHHH
Q psy4644 308 CKTVANMIKGKTPEEIRKTFN------IK-NDFTQAEEEQVRK 343 (351)
Q Consensus 308 ~~~vA~~i~gks~eEir~~f~------i~-~d~t~eee~~i~~ 343 (351)
=..||..+.|+|+.+.|..+. +. ..+|+||++.|.+
T Consensus 33 W~~Ia~~~~~Rt~~qcr~Rw~~~l~p~~~~~~WT~eEd~~L~~ 75 (126)
T 3osg_A 33 WKMIAATFPNRNARQCRDRWKNYLAPSISHTPWTAEEDALLVQ 75 (126)
T ss_dssp HHHHHHTCTTCCHHHHHHHHHHHTSTTSCCSCCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHhhhcccccccccCCHHHHHHHHH
Confidence 467788888999999998743 33 3699999988765
No 72
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=25.26 E-value=66 Score=24.84 Aligned_cols=36 Identities=19% Similarity=0.484 Sum_probs=27.3
Q ss_pred HHHHHHHHcCCCHHHHHhHcC------C-CCCCChHHHHHHHh
Q psy4644 119 CKTVANMIKGKTPEEIRKTFN------I-KNDFTQAEEEQVRK 154 (351)
Q Consensus 119 ~~~vA~~i~gkt~eEiR~~f~------i-~~d~t~eEe~~i~~ 154 (351)
=..||..+.|+|..++|..|. + ...+|+||.+.+.+
T Consensus 50 W~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~~~WT~eEd~~L~~ 92 (128)
T 1h8a_C 50 WSDIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQ 92 (128)
T ss_dssp HHHHHHHSSSCCHHHHHHHHHHTTCSSSCCSCCCHHHHHHHHH
T ss_pred HHHHHHHhcCCcHHHHHHHHHHhcccccccccCCHHHHHHHHH
Confidence 357788889999999998653 2 23689998877755
No 73
>3g5o_A Uncharacterized protein RV2865; heterotetramer, 1:1 ratio, structural genomics, PSI-2, prote structure initiative; 2.00A {Mycobacterium tuberculosis}
Probab=25.13 E-value=1.2e+02 Score=22.69 Aligned_cols=49 Identities=20% Similarity=0.328 Sum_probs=38.7
Q ss_pred CChhHHHHHHHHhhhcCchhHHHHHHHHHHHHHcCC--CHHHHHhHcCCCC
Q psy4644 94 VDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGK--TPEEIRKTFNIKN 142 (351)
Q Consensus 94 ~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gk--t~eEiR~~f~i~~ 142 (351)
++.+..-.|......|..+.+.....+..++.-.|+ |.+|+++.+|+..
T Consensus 47 ~s~e~ye~l~etl~LL~~~~~~~~L~~a~~~~~~G~~~s~eev~~~lgl~~ 97 (108)
T 3g5o_A 47 VGADEWESLQETLYWLAQPGIRESIAEADADIASGRTYGEDEIRAEFGVPR 97 (108)
T ss_dssp EEHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHTCEECHHHHHHHHTCCC
T ss_pred ecHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHcCCCcCHHHHHHHhCCCc
Confidence 445555556667777888888888888888877776 8999999999875
No 74
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=24.97 E-value=36 Score=26.62 Aligned_cols=34 Identities=15% Similarity=0.510 Sum_probs=25.6
Q ss_pred HHHHHhhCCCHHHHHHHc------CCC-CCCCHHHHHHHHH
Q psy4644 310 TVANMIKGKTPEEIRKTF------NIK-NDFTQAEEEQVRK 343 (351)
Q Consensus 310 ~vA~~i~gks~eEir~~f------~i~-~d~t~eee~~i~~ 343 (351)
.||..+.|+|+.+.|..+ ++. ..+|+||++.|..
T Consensus 27 ~Ia~~~~~Rt~~qcr~Rw~~~l~p~~~~~~Wt~eEd~~L~~ 67 (131)
T 3zqc_A 27 RITSFLPNRSPKQCRERWFNHLDPAVVKHAWTPEEDETIFR 67 (131)
T ss_dssp GGTTSCTTSCHHHHHHHHHHHTSTTCCCSCCCHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHhhccCccccCCCCCHHHHHHHHH
Confidence 456666789999998875 344 3699999988765
No 75
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=24.69 E-value=30 Score=25.37 Aligned_cols=18 Identities=33% Similarity=0.691 Sum_probs=16.7
Q ss_pred CCCHHHHHhHcCCCCCCC
Q psy4644 128 GKTPEEIRKTFNIKNDFT 145 (351)
Q Consensus 128 gkt~eEiR~~f~i~~d~t 145 (351)
|.|++|=|+.||++.|+.
T Consensus 43 gltpeeYR~kwGlp~dyP 60 (87)
T 2jsp_A 43 SMTPEEYREKWDLPVDYP 60 (87)
T ss_dssp CSCHHHHHHHTTCGGGCC
T ss_pred CCCHHHHHHHhCCCCCCc
Confidence 999999999999999864
No 76
>2qq4_A Iron-sulfur cluster biosynthesis protein ISCU; zinc binding, iron-sulfur cluster binding, three conserved Cys, three beta strands; 1.85A {Thermus thermophilus}
Probab=23.47 E-value=64 Score=25.57 Aligned_cols=36 Identities=14% Similarity=0.160 Sum_probs=23.3
Q ss_pred HHHhhhcCchhHHHHH-HHHHHHHHcCCCHHHHHhHc
Q psy4644 103 ILAANYLDIKGLLDVT-CKTVANMIKGKTPEEIRKTF 138 (351)
Q Consensus 103 l~AA~~L~I~~L~~l~-~~~vA~~i~gkt~eEiR~~f 138 (351)
|..+.|-.-=.-.-.+ +..++.+++|||.+|.+++.
T Consensus 54 I~d~~f~~~GCais~ASaS~~te~i~Gkt~~ea~~i~ 90 (138)
T 2qq4_A 54 IADIRFQGQGCAISTASASLMTEAVKGKKVAEALELS 90 (138)
T ss_dssp EEEEEEEEECCHHHHHHHHHHHHHHTTSBHHHHHHHH
T ss_pred EEEEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 4444444443334444 45567799999999998864
No 77
>3lvl_A NIFU-like protein; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 3.00A {Escherichia coli} PDB: 2l4x_A 2kqk_A 1q48_A 1r9p_A 1wfz_A
Probab=23.33 E-value=59 Score=25.44 Aligned_cols=37 Identities=19% Similarity=0.220 Sum_probs=23.9
Q ss_pred HHHHhhhcCchhHHHH-HHHHHHHHHcCCCHHHHHhHc
Q psy4644 102 LILAANYLDIKGLLDV-TCKTVANMIKGKTPEEIRKTF 138 (351)
Q Consensus 102 Ll~AA~~L~I~~L~~l-~~~~vA~~i~gkt~eEiR~~f 138 (351)
.|..+.|-..=.-.-. ++..++.+++|||.+|.+++.
T Consensus 53 ~I~d~~f~~~GCais~ASaS~~te~i~Gkt~~ea~~i~ 90 (129)
T 3lvl_A 53 IIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIK 90 (129)
T ss_dssp CEEEEEEEEESCHHHHHHHHHHHHHHTTCCHHHHHTCC
T ss_pred eEEEEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 3444555444333333 445667799999999998764
No 78
>3g5o_A Uncharacterized protein RV2865; heterotetramer, 1:1 ratio, structural genomics, PSI-2, prote structure initiative; 2.00A {Mycobacterium tuberculosis}
Probab=22.16 E-value=1.5e+02 Score=22.27 Aligned_cols=49 Identities=20% Similarity=0.328 Sum_probs=40.3
Q ss_pred CChHHHHHHHHhhhccCchhHHHHHHHHHHHHhhCC--CHHHHHHHcCCCC
Q psy4644 283 VDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGK--TPEEIRKTFNIKN 331 (351)
Q Consensus 283 ~~~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gk--s~eEir~~f~i~~ 331 (351)
++.+..-.|......|..+.+.....+..++.-.|+ |.+|+++.+|+..
T Consensus 47 ~s~e~ye~l~etl~LL~~~~~~~~L~~a~~~~~~G~~~s~eev~~~lgl~~ 97 (108)
T 3g5o_A 47 VGADEWESLQETLYWLAQPGIRESIAEADADIASGRTYGEDEIRAEFGVPR 97 (108)
T ss_dssp EEHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHTCEECHHHHHHHHTCCC
T ss_pred ecHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHcCCCcCHHHHHHHhCCCc
Confidence 455666667777788888899999988898887886 8999999999975
No 79
>1xjs_A NIFU-like protein; SR17, structure, autostructure, iron-sulfur, zinc, northeast structural genomics consortium, NESG; NMR {Bacillus subtilis} SCOP: d.224.1.2 PDB: 2azh_A
Probab=22.03 E-value=70 Score=25.64 Aligned_cols=37 Identities=16% Similarity=0.180 Sum_probs=24.4
Q ss_pred HHHHhhhcCchhHHHHH-HHHHHHHHcCCCHHHHHhHc
Q psy4644 102 LILAANYLDIKGLLDVT-CKTVANMIKGKTPEEIRKTF 138 (351)
Q Consensus 102 Ll~AA~~L~I~~L~~l~-~~~vA~~i~gkt~eEiR~~f 138 (351)
.|..+.|-.-=.-.-.+ +..++.+++|||.+|.+++.
T Consensus 55 ~I~d~~f~~~GCais~ASaS~mte~v~Gkt~~Ea~~i~ 92 (147)
T 1xjs_A 55 IVEDAKFEGEGCSISMASASMMTQAIKGKDIETALSMS 92 (147)
T ss_dssp BCCEEEEEEESSHHHHHHHHHHHHHHTTSBHHHHHHHH
T ss_pred eEEEEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 45455555544444444 45567799999999998864
No 80
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=21.55 E-value=58 Score=24.04 Aligned_cols=19 Identities=26% Similarity=0.552 Sum_probs=16.3
Q ss_pred HHHHHHhhCCCHHHHHHHc
Q psy4644 309 KTVANMIKGKTPEEIRKTF 327 (351)
Q Consensus 309 ~~vA~~i~gks~eEir~~f 327 (351)
.++|.++.+||++|++..|
T Consensus 59 a~iA~~L~Nks~nqV~~RF 77 (95)
T 1ug2_A 59 SVISQQLGNKTPVEVSHRF 77 (95)
T ss_dssp HHHHHHHSSCCHHHHHHHH
T ss_pred HHHHHHHccCCHHHHHHHH
Confidence 4588888999999999887
No 81
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=21.10 E-value=80 Score=24.49 Aligned_cols=93 Identities=12% Similarity=0.087 Sum_probs=55.6
Q ss_pred CCccEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcC---CCCCCCCcccCCCCCHHHHHHHHHHHHhcCCCCCCCCCccc
Q psy4644 189 VNSAILRKSSDGEIFNVDFEIAKSSVTIKTMVEDLG---LEDEDEEIVPLPNVNSAILRKVIQWATYHKDDPPPPEDDEN 265 (351)
Q Consensus 189 ~~~~i~L~S~DG~~f~v~~~~a~~S~~l~~~l~~~~---~~~~~~~~Ipl~~v~~~iL~kVi~yc~~h~~~~~~~~~~~~ 265 (351)
.+..|+| --.|+.|.+....+..-+ ..||...+ ......+.+=+ +=++..++.|+.|+..-+-.
T Consensus 11 ~~~~V~L-NVGG~~F~t~~~TL~~~p--~S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~--------- 77 (124)
T 1s1g_A 11 QDELIVL-NVSGRRFQTWRTTLERYP--DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLH--------- 77 (124)
T ss_dssp -CCEEEE-EETTEEEEEEHHHHTTST--TSSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBC---------
T ss_pred CCCEEEE-EeCCEEEEEeHHHHhcCC--CceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCC---------
Confidence 3455554 445999999998764311 01111111 00112334444 56999999999999974311
Q ss_pred cccccccccchhhhhhcCChHHHHHHHHhhhccCchhH-HHHHHHH
Q psy4644 266 KEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGL-LDVTCKT 310 (351)
Q Consensus 266 ~~~~~~~~~~wD~~F~~~~~~~l~~Ll~AA~~L~I~~L-~~l~~~~ 310 (351)
++. ++ .+..|+..|.|.+|.+| ++.||..
T Consensus 78 -------~p~------~~---~~~~l~~Ea~fy~i~~l~l~~cC~~ 107 (124)
T 1s1g_A 78 -------YPR------YE---CISAYDDELAFYGILPEIIGDCCYE 107 (124)
T ss_dssp -------CCT------TS---CHHHHHHHHHHTTCCGGGBCHHHHH
T ss_pred -------CCC------Cc---CHHHHHHHHHHcCCChHHHHHHHHH
Confidence 110 01 26778999999999998 5888864
No 82
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=20.78 E-value=60 Score=23.92 Aligned_cols=17 Identities=29% Similarity=0.517 Sum_probs=12.2
Q ss_pred HHHHH-cCCCHHHHHhHc
Q psy4644 122 VANMI-KGKTPEEIRKTF 138 (351)
Q Consensus 122 vA~~i-~gkt~eEiR~~f 138 (351)
|..++ .|+|.+||+.+|
T Consensus 49 Vre~l~~G~Sd~eI~~~m 66 (90)
T 2kw0_A 49 VYELMQEGKSKKEIVDYM 66 (90)
T ss_dssp HHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHH
Confidence 34444 399999999864
No 83
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=20.24 E-value=63 Score=23.45 Aligned_cols=17 Identities=24% Similarity=0.397 Sum_probs=12.2
Q ss_pred HHHHH-cCCCHHHHHhHc
Q psy4644 122 VANMI-KGKTPEEIRKTF 138 (351)
Q Consensus 122 vA~~i-~gkt~eEiR~~f 138 (351)
|..++ .|+|.+||+.+|
T Consensus 52 V~~~l~~G~sd~eI~~~~ 69 (84)
T 2hl7_A 52 IYGQLQQGKSDGEIVDYM 69 (84)
T ss_dssp HHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHH
Confidence 34444 399999999864
No 84
>2qq4_A Iron-sulfur cluster biosynthesis protein ISCU; zinc binding, iron-sulfur cluster binding, three conserved Cys, three beta strands; 1.85A {Thermus thermophilus}
Probab=20.23 E-value=84 Score=24.85 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=25.6
Q ss_pred HHHhhhccCchhHHHHHH-HHHHHHhhCCCHHHHHHHc
Q psy4644 291 LILAANYLDIKGLLDVTC-KTVANMIKGKTPEEIRKTF 327 (351)
Q Consensus 291 Ll~AA~~L~I~~L~~l~~-~~vA~~i~gks~eEir~~f 327 (351)
.|..+.|-.-=.-.-.++ -.++.+++|||++|.+++.
T Consensus 53 ~I~d~~f~~~GCais~ASaS~~te~i~Gkt~~ea~~i~ 90 (138)
T 2qq4_A 53 TIADIRFQGQGCAISTASASLMTEAVKGKKVAEALELS 90 (138)
T ss_dssp EEEEEEEEEECCHHHHHHHHHHHHHHTTSBHHHHHHHH
T ss_pred EEEEEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 355555555554444444 5567899999999998876
No 85
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=20.17 E-value=65 Score=23.76 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=25.0
Q ss_pred hhHHHHHHHHhhhcCchhHHHHHHHHHHHHHcCCCHHHHHhHc
Q psy4644 96 QGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTF 138 (351)
Q Consensus 96 ~~~l~~Ll~AA~~L~I~~L~~l~~~~vA~~i~gkt~eEiR~~f 138 (351)
.+.=-++|.+..-.+-.. -+..++|..+.+||++|++..|
T Consensus 38 Re~DR~IL~~cQ~~G~s~---~tFa~iA~~L~Nks~nqV~~RF 77 (95)
T 1ug2_A 38 READRVILTMCQEQGAQP---HTFSVISQQLGNKTPVEVSHRF 77 (95)
T ss_dssp HHHHHHHHHHHHHTTSCT---TTHHHHHHHHSSCCHHHHHHHH
T ss_pred cccCHHHHHHHHhcCCCh---hHHHHHHHHHccCCHHHHHHHH
Confidence 444445555555443310 1234588899999999999877
No 86
>1su0_B NIFU like protein ISCU; structural genomics, BSGC structure funded by NI protein structure initiative, PSI; 2.30A {Streptococcus pyogenes} SCOP: d.224.1.2
Probab=20.07 E-value=90 Score=25.37 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=24.6
Q ss_pred HHHHhhhcCchhHHHHH-HHHHHHHHcCCCHHHHHhHcC
Q psy4644 102 LILAANYLDIKGLLDVT-CKTVANMIKGKTPEEIRKTFN 139 (351)
Q Consensus 102 Ll~AA~~L~I~~L~~l~-~~~vA~~i~gkt~eEiR~~f~ 139 (351)
.|..+.|-.-=.-.-.+ +..++.+++|||.+|.+++..
T Consensus 54 ~I~d~~F~~~GCais~ASaS~mte~v~Gkt~~Ea~~i~~ 92 (159)
T 1su0_B 54 KIEDIAFAGNGCTISTASSSMMTDAVIGKSKEEALALAD 92 (159)
T ss_dssp SEEEEEEEEECCHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred EEEEEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 44445555544444444 455677999999999988653
Done!