Your job contains 1 sequence.
>psy4644
MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVEDLGLEDEDEEIVPLPNVNSAILRKVIQW
ATYHKDDPPPPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK
TVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCTLFELILAANYLDIKGLEDED
EEIVPLPNVNSAILRKSSDGEIFNVDFEIAKSSVTIKTMVEDLGLEDEDEEIVPLPNVNS
AILRKVIQWATYHKDDPPPPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDI
KGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4644
(351 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0025637 - symbol:skpA "skpA" species:7227 "Drosoph... 567 6.1e-55 1
UNIPROTKB|Q5ZKF5 - symbol:SKP1 "S-phase kinase-associated... 564 1.3e-54 1
UNIPROTKB|Q3ZCF3 - symbol:SKP1 "S-phase kinase-associated... 564 1.3e-54 1
UNIPROTKB|P63208 - symbol:SKP1 "S-phase kinase-associated... 564 1.3e-54 1
UNIPROTKB|P63209 - symbol:SKP1 "S-phase kinase-associated... 564 1.3e-54 1
UNIPROTKB|Q4R5B9 - symbol:SKP1 "S-phase kinase-associated... 564 1.3e-54 1
UNIPROTKB|Q5R512 - symbol:SKP1 "S-phase kinase-associated... 564 1.3e-54 1
UNIPROTKB|Q71U00 - symbol:skp1 "S-phase kinase-associated... 564 1.3e-54 1
MGI|MGI:103575 - symbol:Skp1a "S-phase kinase-associated ... 563 1.6e-54 1
RGD|1359648 - symbol:Skp1 "S-phase kinase-associated prot... 563 1.6e-54 1
ZFIN|ZDB-GENE-040426-1707 - symbol:skp1 "S-phase kinase-a... 560 3.4e-54 1
UNIPROTKB|E2RRW0 - symbol:SKP1 "Uncharacterized protein" ... 558 5.5e-54 1
UNIPROTKB|G3MZV0 - symbol:G3MZV0 "Uncharacterized protein... 525 1.7e-50 1
UNIPROTKB|F8W8N3 - symbol:SKP1 "S-phase kinase-associated... 517 1.2e-49 1
FB|FBgn0026176 - symbol:skpB "skpB" species:7227 "Drosoph... 508 1.1e-48 1
UNIPROTKB|E5RJR5 - symbol:SKP1 "S-phase kinase-associated... 497 1.6e-47 1
UNIPROTKB|E7ERH2 - symbol:SKP1 "S-phase kinase-associated... 479 1.3e-45 1
WB|WBGene00004807 - symbol:skr-1 species:6239 "Caenorhabd... 469 1.5e-44 1
UNIPROTKB|G5ECU1 - symbol:skr-1 "Protein SKR-1" species:6... 469 1.5e-44 1
DICTYBASE|DDB_G0269230 - symbol:fpaA "ubiquitin ligase su... 454 5.7e-43 1
DICTYBASE|DDB_G0273615 - symbol:fpaB-2 "ubiquitin ligase ... 454 5.7e-43 1
DICTYBASE|DDB_G0273251 - symbol:fpaB-1 "ubiquitin ligase ... 454 5.7e-43 1
TAIR|locus:2204435 - symbol:SKP1 "AT1G75950" species:3702... 421 1.8e-39 1
FB|FBgn0034863 - symbol:skpF "skpF" species:7227 "Drosoph... 418 3.7e-39 1
TAIR|locus:2165825 - symbol:ASK2 "AT5G42190" species:3702... 416 6.1e-39 1
UNIPROTKB|G4N3J5 - symbol:MGG_04978 "E3 ubiquitin ligase ... 416 6.1e-39 1
ASPGD|ASPL0000044827 - symbol:sconC species:162425 "Emeri... 402 1.9e-37 1
POMBASE|SPBC409.05 - symbol:skp1 "SCF ubiquitin ligase co... 399 3.9e-37 1
WB|WBGene00004808 - symbol:skr-2 species:6239 "Caenorhabd... 392 2.1e-36 1
UNIPROTKB|G5EDD8 - symbol:skr-2 "SKR-2" species:6239 "Cae... 392 2.1e-36 1
SGD|S000002736 - symbol:SKP1 "Evolutionarily conserved ki... 342 2.4e-35 2
WB|WBGene00004809 - symbol:skr-3 species:6239 "Caenorhabd... 374 1.7e-34 1
FB|FBgn0026175 - symbol:skpC "skpC" species:7227 "Drosoph... 374 1.7e-34 1
TAIR|locus:2198621 - symbol:SK4 "AT1G20140" species:3702 ... 369 5.8e-34 1
FB|FBgn0026174 - symbol:skpD "skpD" species:7227 "Drosoph... 363 2.5e-33 1
TAIR|locus:2124281 - symbol:SK11 "AT4G34210" species:3702... 357 1.1e-32 1
TAIR|locus:2050281 - symbol:SK3 "AT2G25700" species:3702 ... 352 3.7e-32 1
TAIR|locus:2139504 - symbol:SK12 "AT4G34470" species:3702... 351 4.7e-32 1
CGD|CAL0001786 - symbol:SKP1 species:5476 "Candida albica... 341 5.4e-31 1
WB|WBGene00004810 - symbol:skr-4 species:6239 "Caenorhabd... 336 1.8e-30 1
WB|WBGene00004811 - symbol:skr-5 species:6239 "Caenorhabd... 308 1.7e-27 1
TAIR|locus:2080532 - symbol:SK13 "AT3G60010" species:3702... 306 2.8e-27 1
TAIR|locus:2093084 - symbol:SK9 "AT3G21850" species:3702 ... 299 1.5e-26 1
TAIR|locus:2056966 - symbol:SK19 "AT2G03160" species:3702... 236 1.9e-26 2
TAIR|locus:2056956 - symbol:SK14 "AT2G03170" species:3702... 298 1.9e-26 1
TAIR|locus:2102370 - symbol:SK15 "AT3G25650" species:3702... 297 2.5e-26 1
TAIR|locus:2080542 - symbol:SK5 "AT3G60020" species:3702 ... 296 3.2e-26 1
FB|FBgn0031074 - symbol:skpE "skpE" species:7227 "Drosoph... 295 4.0e-26 1
TAIR|locus:2093094 - symbol:SK10 "AT3G21860" species:3702... 292 8.4e-26 1
UNIPROTKB|E5RGM3 - symbol:SKP1 "S-phase kinase-associated... 278 2.6e-24 1
TAIR|locus:2056931 - symbol:SK16 "AT2G03190" species:3702... 256 5.5e-22 1
TAIR|locus:2093064 - symbol:SK8 "AT3G21830" species:3702 ... 250 2.4e-21 1
WB|WBGene00004813 - symbol:skr-7 species:6239 "Caenorhabd... 247 4.9e-21 1
WB|WBGene00004814 - symbol:skr-8 species:6239 "Caenorhabd... 242 1.7e-20 1
WB|WBGene00004816 - symbol:skr-10 species:6239 "Caenorhab... 240 2.7e-20 1
WB|WBGene00004818 - symbol:skr-12 species:6239 "Caenorhab... 233 1.5e-19 1
WB|WBGene00004815 - symbol:skr-9 species:6239 "Caenorhabd... 230 3.1e-19 1
WB|WBGene00004820 - symbol:skr-14 species:6239 "Caenorhab... 224 1.4e-18 1
WB|WBGene00004819 - symbol:skr-13 species:6239 "Caenorhab... 223 1.7e-18 1
TAIR|locus:2061709 - symbol:MEO "AT2G20160" species:3702 ... 217 7.5e-18 1
WB|WBGene00004812 - symbol:skr-6 species:6239 "Caenorhabd... 206 1.1e-16 1
WB|WBGene00004826 - symbol:skr-20 species:6239 "Caenorhab... 191 5.1e-15 1
UNIPROTKB|G5EE98 - symbol:skr-20 "Protein SKR-20" species... 191 5.1e-15 1
WB|WBGene00004823 - symbol:skr-17 species:6239 "Caenorhab... 177 2.3e-13 1
WB|WBGene00004822 - symbol:skr-16 species:6239 "Caenorhab... 166 4.1e-12 1
WB|WBGene00004821 - symbol:skr-15 species:6239 "Caenorhab... 166 4.1e-12 1
TAIR|locus:2093074 - symbol:SK7 "AT3G21840" species:3702 ... 161 1.5e-11 1
UNIPROTKB|E5RI56 - symbol:SKP1 "S-phase kinase-associated... 161 1.5e-11 1
WB|WBGene00018935 - symbol:skr-18 species:6239 "Caenorhab... 147 5.8e-10 1
TAIR|locus:505006407 - symbol:SK21 "AT3G61415" species:37... 160 2.7e-09 1
WB|WBGene00004827 - symbol:skr-21 species:6239 "Caenorhab... 141 2.7e-09 1
TAIR|locus:2050709 - symbol:SK20 "AT2G45950" species:3702... 159 3.5e-09 1
FB|FBgn0034904 - symbol:CG15800 species:7227 "Drosophila ... 136 9.8e-09 1
TAIR|locus:2085201 - symbol:SK6 "AT3G53060" species:3702 ... 135 1.3e-08 1
WB|WBGene00004825 - symbol:skr-19 species:6239 "Caenorhab... 126 1.3e-07 1
UNIPROTKB|E5RGM4 - symbol:SKP1 "S-phase kinase-associated... 126 1.3e-07 1
UNIPROTKB|E5RHM3 - symbol:SKP1 "S-phase kinase-associated... 126 1.3e-07 1
TAIR|locus:2168454 - symbol:AT5G59140 species:3702 "Arabi... 73 6.7e-05 2
>FB|FBgn0025637 [details] [associations]
symbol:skpA "skpA" species:7227 "Drosophila melanogaster"
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0042023
"DNA endoreduplication" evidence=IMP] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA;NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0010824
"regulation of centrosome duplication" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0031647 "regulation of protein
stability" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0005813 GO:GO:0005875
GO:GO:0007095 GO:GO:0007067 GO:GO:0051298 GO:GO:0022008
GO:GO:0005819 GO:GO:0045931 EMBL:AE014298 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0031647 GO:GO:0006511
GO:GO:0019005 GO:GO:0030261 eggNOG:COG5201 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0042023 EMBL:AL031581 GO:GO:0010824
OMA:VIQWCTY GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF220066
EMBL:AY069297 EMBL:BT099582 EMBL:BT099610 PIR:T13390
RefSeq:NP_001033818.1 RefSeq:NP_477390.1 RefSeq:NP_726690.1
RefSeq:NP_726691.1 RefSeq:NP_726692.1 RefSeq:NP_726693.1
RefSeq:NP_726694.1 RefSeq:NP_726695.1 UniGene:Dm.7039 SMR:O77430
DIP:DIP-18869N IntAct:O77430 MINT:MINT-318247 STRING:O77430
EnsemblMetazoa:FBtr0070123 EnsemblMetazoa:FBtr0070124
EnsemblMetazoa:FBtr0070125 EnsemblMetazoa:FBtr0070126
EnsemblMetazoa:FBtr0070127 EnsemblMetazoa:FBtr0070128
EnsemblMetazoa:FBtr0070129 EnsemblMetazoa:FBtr0100530 GeneID:31016
KEGG:dme:Dmel_CG16983 UCSC:CG16983-RA CTD:31016 FlyBase:FBgn0025637
InParanoid:O77430 OrthoDB:EOG4BG7CC GenomeRNAi:31016 NextBio:771500
Uniprot:O77430
Length = 162
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 114/159 (71%), Positives = 122/159 (76%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQW 60
MP+IKLQSSD EIF+ D +IAK S TIKTM+ IVPLPNVNS ILRKV+ W
Sbjct: 1 MPSIKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTW 60
Query: 61 ATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 120
A YH RTDDI SWDADFLKVDQGTLFELILAANYLDIKGLL++TCK
Sbjct: 61 AHYHKDDPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCK 120
Query: 121 TVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
TVANMIKGKTPEEIRKTFNIK DF+ AEEEQVRKENEWC
Sbjct: 121 TVANMIKGKTPEEIRKTFNIKKDFSPAEEEQVRKENEWC 159
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 112/160 (70%), Positives = 121/160 (75%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWAT 251
+I +SSD EIF+ D +IAK S TIKTM+ IVPLPNVNS ILRKV+ WA
Sbjct: 3 SIKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAH 62
Query: 252 YHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 311
YH RTDDI SWDADFLKVDQGTLFELILAANYLDIKGLL++TCKTV
Sbjct: 63 YHKDDPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTV 122
Query: 312 ANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
ANMIKGKTPEEIRKTFNIK DF+ AEEEQVRKENEWCEEK
Sbjct: 123 ANMIKGKTPEEIRKTFNIKKDFSPAEEEQVRKENEWCEEK 162
>UNIPROTKB|Q5ZKF5 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9031 "Gallus gallus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0005829 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519 OMA:VIQWCTY CTD:6500
GeneTree:ENSGT00390000012652 HOVERGEN:HBG057008 OrthoDB:EOG498V26
EMBL:AJ720129 IPI:IPI00591045 RefSeq:NP_001006153.1
UniGene:Gga.1718 ProteinModelPortal:Q5ZKF5 SMR:Q5ZKF5 STRING:Q5ZKF5
PRIDE:Q5ZKF5 Ensembl:ENSGALT00000010461 GeneID:416319
KEGG:gga:416319 InParanoid:Q5ZKF5 NextBio:20819793 Uniprot:Q5ZKF5
Length = 163
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 115/160 (71%), Positives = 123/160 (76%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP+IKLQSSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
KTVANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 113/161 (70%), Positives = 122/161 (75%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWA 250
+I +SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQW
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 251 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKT
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 311 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
VANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WCEEK
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>UNIPROTKB|Q3ZCF3 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9913 "Bos taurus" [GO:0005829 "cytosol" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0005829 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005 GO:GO:0004842
HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519 GO:GO:0031146
OMA:VIQWCTY EMBL:BT029901 EMBL:BC102435 IPI:IPI00699118
RefSeq:NP_001029953.1 UniGene:Bt.87240 ProteinModelPortal:Q3ZCF3
SMR:Q3ZCF3 STRING:Q3ZCF3 PRIDE:Q3ZCF3 Ensembl:ENSBTAT00000035306
GeneID:615427 KEGG:bta:615427 CTD:6500 GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 InParanoid:Q3ZCF3 OrthoDB:EOG498V26
NextBio:20899611 Uniprot:Q3ZCF3
Length = 163
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 115/160 (71%), Positives = 123/160 (76%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP+IKLQSSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
KTVANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 113/161 (70%), Positives = 122/161 (75%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWA 250
+I +SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQW
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 251 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKT
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 311 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
VANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WCEEK
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>UNIPROTKB|P63208 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0035518
"histone H2A monoubiquitination" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0000080 "G1 phase of mitotic
cell cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051437 "positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0016032 EMBL:CH471062
GO:GO:0000082 GO:GO:0007219 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0019005 GO:GO:0004842 GO:GO:0000084
GO:GO:0031145 GO:GO:0051437 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0000080 GO:GO:0035518 Reactome:REACT_24941
GO:GO:0031146 PDB:2AST PDBsum:2AST PDB:2ASS PDBsum:2ASS PDB:1P22
PDBsum:1P22 PDB:1LDK PDBsum:1LDK PDB:2E31 PDB:2E32 PDBsum:2E31
PDBsum:2E32 PDB:3L2O PDBsum:3L2O PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR OMA:VIQWCTY CTD:6500
HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:U33760 EMBL:Z47087
EMBL:BC009839 EMBL:BC020798 EMBL:BC025673 EMBL:BC065730 EMBL:U37558
IPI:IPI00172421 IPI:IPI00301364 PIR:I39170 RefSeq:NP_008861.2
RefSeq:NP_733779.1 UniGene:Hs.171626 PDB:1FQV PDB:1FS1 PDB:1FS2
PDBsum:1FQV PDBsum:1FS1 PDBsum:1FS2 ProteinModelPortal:P63208
SMR:P63208 DIP:DIP-31606N IntAct:P63208 MINT:MINT-5001195
STRING:P63208 PhosphoSite:P63208 DMDM:52783797 SWISS-2DPAGE:P63208
PaxDb:P63208 PeptideAtlas:P63208 PRIDE:P63208 DNASU:6500
Ensembl:ENST00000353411 Ensembl:ENST00000517625
Ensembl:ENST00000522552 Ensembl:ENST00000522855 GeneID:6500
KEGG:hsa:6500 UCSC:uc003kzc.4 UCSC:uc003kzd.4 GeneCards:GC05M133521
H-InvDB:HIX0129723 HGNC:HGNC:10899 HPA:CAB012982 MIM:601434
neXtProt:NX_P63208 PharmGKB:PA162403424 InParanoid:P63208
PhylomeDB:P63208 ChiTaRS:SKP1 EvolutionaryTrace:P63208
GenomeRNAi:6500 NextBio:25267 ArrayExpress:P63208 Bgee:P63208
CleanEx:HS_SKP1 Genevestigator:P63208 GermOnline:ENSG00000113558
Uniprot:P63208
Length = 163
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 115/160 (71%), Positives = 123/160 (76%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP+IKLQSSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
KTVANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 113/161 (70%), Positives = 122/161 (75%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWA 250
+I +SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQW
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 251 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKT
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 311 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
VANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WCEEK
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>UNIPROTKB|P63209 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:10141 "Cavia porcellus" [GO:0005829 "cytosol" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005
eggNOG:COG5201 HOGENOM:HOG000172184 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0031146
CTD:6500 HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:Z35481
PIR:A57630 RefSeq:NP_001166486.1 ProteinModelPortal:P63209
SMR:P63209 MINT:MINT-108497 STRING:P63209 PRIDE:P63209
GeneID:100135616 InParanoid:P63209 Uniprot:P63209
Length = 163
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 115/160 (71%), Positives = 123/160 (76%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP+IKLQSSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
KTVANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 113/161 (70%), Positives = 122/161 (75%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWA 250
+I +SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQW
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 251 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKT
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 311 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
VANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WCEEK
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>UNIPROTKB|Q4R5B9 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9541 "Macaca fascicularis" [GO:0005829 "cytosol"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005829 GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0019005 HSSP:P63208 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0031146
HOVERGEN:HBG057008 EMBL:AB169346 EMBL:AB169625
ProteinModelPortal:Q4R5B9 SMR:Q4R5B9 PRIDE:Q4R5B9 Uniprot:Q4R5B9
Length = 163
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 115/160 (71%), Positives = 123/160 (76%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP+IKLQSSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
KTVANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 113/161 (70%), Positives = 122/161 (75%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWA 250
+I +SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQW
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 251 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKT
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 311 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
VANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WCEEK
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>UNIPROTKB|Q5R512 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9601 "Pongo abelii" [GO:0005829 "cytosol" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005
HSSP:P63208 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0031146 OMA:VIQWCTY
CTD:6500 GeneTree:ENSGT00390000012652 HOVERGEN:HBG057008
EMBL:CR860371 EMBL:CR861073 RefSeq:NP_001127637.1 UniGene:Pab.18558
ProteinModelPortal:Q5R512 SMR:Q5R512 PRIDE:Q5R512
Ensembl:ENSPPYT00000018360 GeneID:100174716 KEGG:pon:100174716
InParanoid:Q5R512 Uniprot:Q5R512
Length = 163
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 115/160 (71%), Positives = 123/160 (76%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP+IKLQSSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
KTVANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 113/161 (70%), Positives = 122/161 (75%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWA 250
+I +SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQW
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 251 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKT
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 311 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
VANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WCEEK
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>UNIPROTKB|Q71U00 [details] [associations]
symbol:skp1 "S-phase kinase-associated protein 1"
species:8355 "Xenopus laevis" [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 CTD:6500 HOVERGEN:HBG057008 EMBL:AF176352
EMBL:AF169342 EMBL:BC054184 RefSeq:NP_001080844.1 UniGene:Xl.57174
ProteinModelPortal:Q71U00 SMR:Q71U00 IntAct:Q71U00 PRIDE:Q71U00
GeneID:380538 KEGG:xla:380538 Xenbase:XB-GENE-919643 Uniprot:Q71U00
Length = 163
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 115/160 (71%), Positives = 123/160 (76%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP+IKLQSSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
KTVANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 113/161 (70%), Positives = 122/161 (75%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWA 250
+I +SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQW
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 251 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKT
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 311 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
VANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WCEEK
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>MGI|MGI:103575 [details] [associations]
symbol:Skp1a "S-phase kinase-associated protein 1A"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO;IC] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO;IC] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO;IDA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO;IDA]
[GO:0035518 "histone H2A monoubiquitination" evidence=ISO]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
MGI:MGI:103575 GO:GO:0005829 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0019005 GO:GO:0004842 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519
GO:GO:0031146 OMA:VIQWCTY GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 OrthoDB:EOG498V26 ChiTaRS:SKP1 EMBL:AF083214
EMBL:AK002983 EMBL:AK010628 EMBL:AK012498 EMBL:AK014245
EMBL:AK027909 EMBL:AK078330 EMBL:AK088339 EMBL:BC002115
IPI:IPI00331163 RefSeq:NP_035673.3 UniGene:Mm.42944
ProteinModelPortal:Q9WTX5 SMR:Q9WTX5 IntAct:Q9WTX5 STRING:Q9WTX5
PhosphoSite:Q9WTX5 REPRODUCTION-2DPAGE:Q9WTX5 PaxDb:Q9WTX5
PRIDE:Q9WTX5 Ensembl:ENSMUST00000037324 Ensembl:ENSMUST00000109072
GeneID:21402 KEGG:mmu:21402 CTD:21402 InParanoid:Q9WTX5
NextBio:300668 Bgee:Q9WTX5 CleanEx:MM_SKP1A Genevestigator:Q9WTX5
GermOnline:ENSMUSG00000036309 Uniprot:Q9WTX5
Length = 163
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 115/160 (71%), Positives = 122/160 (76%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP IKLQSSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQ
Sbjct: 1 MPTIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
KTVANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 112/157 (71%), Positives = 120/157 (76%)
Query: 196 KSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWATYHX 254
+SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQW T+H
Sbjct: 7 QSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHK 66
Query: 255 XXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 314
RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM
Sbjct: 67 DDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 126
Query: 315 IKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
IKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WCEEK
Sbjct: 127 IKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>RGD|1359648 [details] [associations]
symbol:Skp1 "S-phase kinase-associated protein 1" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=ISO;ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS] [GO:0031519 "PcG protein
complex" evidence=IEA;ISO] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 RGD:1359648 GO:GO:0005829
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005
GO:GO:0004842 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519 GO:GO:0031146
OMA:VIQWCTY CTD:6500 GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:BC058152 IPI:IPI00369350
RefSeq:NP_001007609.1 UniGene:Rn.3477 ProteinModelPortal:Q6PEC4
SMR:Q6PEC4 DIP:DIP-29863N IntAct:Q6PEC4 STRING:Q6PEC4
PhosphoSite:Q6PEC4 PRIDE:Q6PEC4 Ensembl:ENSRNOT00000007676
GeneID:287280 KEGG:rno:287280 UCSC:RGD:1359648 InParanoid:Q6PEC4
NextBio:625795 ArrayExpress:Q6PEC4 Genevestigator:Q6PEC4
GermOnline:ENSRNOG00000005828 Uniprot:Q6PEC4
Length = 163
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 115/160 (71%), Positives = 122/160 (76%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP IKLQSSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQ
Sbjct: 1 MPTIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
KTVANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 112/157 (71%), Positives = 120/157 (76%)
Query: 196 KSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWATYHX 254
+SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQW T+H
Sbjct: 7 QSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHK 66
Query: 255 XXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 314
RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM
Sbjct: 67 DDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 126
Query: 315 IKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
IKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WCEEK
Sbjct: 127 IKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>ZFIN|ZDB-GENE-040426-1707 [details] [associations]
symbol:skp1 "S-phase kinase-associated protein 1"
species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 ZFIN:ZDB-GENE-040426-1707
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0016301
GO:GO:0006511 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 OMA:KNWDADF CTD:6500 GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:FP017197 EMBL:BC059536
EMBL:AY648843 IPI:IPI00501108 RefSeq:NP_957037.1 UniGene:Dr.83245
SMR:Q6PBY8 STRING:Q6PBY8 Ensembl:ENSDART00000008454 GeneID:393716
KEGG:dre:393716 InParanoid:Q6PBY8 NextBio:20814718 Uniprot:Q6PBY8
Length = 163
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 114/160 (71%), Positives = 122/160 (76%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP IKLQSSDGE+F VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQ
Sbjct: 1 MPTIKLQSSDGEMFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
KTVANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 111/157 (70%), Positives = 120/157 (76%)
Query: 196 KSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWATYHX 254
+SSDGE+F VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQW T+H
Sbjct: 7 QSSDGEMFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHK 66
Query: 255 XXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 314
RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM
Sbjct: 67 DDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 126
Query: 315 IKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
IKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WCEEK
Sbjct: 127 IKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>UNIPROTKB|E2RRW0 [details] [associations]
symbol:SKP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0005829 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0019005 GO:GO:0004842 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0035518
GO:GO:0031519 GeneTree:ENSGT00390000012652 OMA:IMNILEV
EMBL:AAEX03007782 Ensembl:ENSCAFT00000001535 Uniprot:E2RRW0
Length = 163
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 114/160 (71%), Positives = 122/160 (76%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP+IKL SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQ
Sbjct: 1 MPSIKLPSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
KTVANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 112/156 (71%), Positives = 119/156 (76%)
Query: 197 SSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWATYHXX 255
SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQW T+H
Sbjct: 8 SSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKD 67
Query: 256 XXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMI 315
RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMI
Sbjct: 68 DPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMI 127
Query: 316 KGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
KGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WCEEK
Sbjct: 128 KGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>UNIPROTKB|G3MZV0 [details] [associations]
symbol:G3MZV0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 OMA:IMNILEV
EMBL:DAAA02025649 PRIDE:G3MZV0 Ensembl:ENSBTAT00000063619
NextBio:20927407 Uniprot:G3MZV0
Length = 160
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 110/160 (68%), Positives = 119/160 (74%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP+IKLQSSDGEIF VD EIAK SVTIKT++ VPLPNVN+AIL+K
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTVLEDLGMDDEGDDDPVPLPNVNAAILKK--- 57
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 58 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 117
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
KTVANMIKGKT EEIRKTFNIKNDFT+ EE QVRKEN+WC
Sbjct: 118 KTVANMIKGKTREEIRKTFNIKNDFTEEEEAQVRKENQWC 157
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 108/161 (67%), Positives = 118/161 (73%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWA 250
+I +SSDGEIF VD EIAK SVTIKT++ VPLPNVN+AIL+K W
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTVLEDLGMDDEGDDDPVPLPNVNAAILKK---WC 59
Query: 251 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKT
Sbjct: 60 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 119
Query: 311 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
VANMIKGKT EEIRKTFNIKNDFT+ EE QVRKEN+WCEEK
Sbjct: 120 VANMIKGKTREEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 160
>UNIPROTKB|F8W8N3 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 HGNC:HGNC:10899 ChiTaRS:SKP1
EMBL:AC104109 EMBL:AC011336 IPI:IPI00985006
ProteinModelPortal:F8W8N3 SMR:F8W8N3 Ensembl:ENST00000328392
ArrayExpress:F8W8N3 Bgee:F8W8N3 Uniprot:F8W8N3
Length = 158
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 108/152 (71%), Positives = 115/152 (75%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP+IKLQSSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQ 151
KTVANMIKGKTPEEIRKTFNIKNDFT+ EE Q
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 103/150 (68%), Positives = 111/150 (74%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWA 250
+I +SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQW
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 251 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKT
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 311 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQ 340
VANMIKGKTPEEIRKTFNIKNDFT+ EE Q
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152
>FB|FBgn0026176 [details] [associations]
symbol:skpB "skpB" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:AE013599 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:AF220067 EMBL:BT023253 RefSeq:NP_610729.1
UniGene:Dm.7613 SMR:Q7KJ69 DIP:DIP-18873N IntAct:Q7KJ69
STRING:Q7KJ69 EnsemblMetazoa:FBtr0088020 GeneID:36298
KEGG:dme:Dmel_CG8881 UCSC:CG8881-RA CTD:36298 FlyBase:FBgn0026176
InParanoid:Q7KJ69 OMA:MPIIRLE OrthoDB:EOG4ZCRMP GenomeRNAi:36298
NextBio:797800 Uniprot:Q7KJ69
Length = 161
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 102/159 (64%), Positives = 117/159 (73%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQW 60
MP I+L+S+D EIF+ D EIAK S TI+ + ++PLPNVNS IL+KV+ W
Sbjct: 1 MPIIRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNS-VLPLPNVNSLILKKVLHW 59
Query: 61 ATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 120
ATYH RTDDISSWDADFLKVDQGTLFELILAANYL+I+GLLDVTCK
Sbjct: 60 ATYHKDDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCK 119
Query: 121 TVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
TVANMIKGK+P+ IR TF I+NDF EEEQVRKENEWC
Sbjct: 120 TVANMIKGKSPQAIRDTFAIQNDFLPQEEEQVRKENEWC 158
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 102/160 (63%), Positives = 118/160 (73%)
Query: 193 ILR-KSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWAT 251
I+R +S+D EIF+ D EIAK S TI+ + ++PLPNVNS IL+KV+ WAT
Sbjct: 3 IIRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNS-VLPLPNVNSLILKKVLHWAT 61
Query: 252 YHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 311
YH RTDDISSWDADFLKVDQGTLFELILAANYL+I+GLLDVTCKTV
Sbjct: 62 YHKDDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTV 121
Query: 312 ANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
ANMIKGK+P+ IR TF I+NDF EEEQVRKENEWCE+K
Sbjct: 122 ANMIKGKSPQAIRDTFAIQNDFLPQEEEQVRKENEWCEDK 161
>UNIPROTKB|E5RJR5 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 HGNC:HGNC:10899 ChiTaRS:SKP1
EMBL:AC104109 EMBL:AC011336 IPI:IPI00974176
ProteinModelPortal:E5RJR5 SMR:E5RJR5 Ensembl:ENST00000521216
ArrayExpress:E5RJR5 Bgee:E5RJR5 Uniprot:E5RJR5
Length = 163
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 104/160 (65%), Positives = 113/160 (70%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP+IKLQSSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+H RTDDI WD +FLK + AANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKYTLRKTTVSLQAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
KTVANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WC
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 102/161 (63%), Positives = 112/161 (69%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWA 250
+I +SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQW
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 251 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
T+H RTDDI WD +FLK + AANYLDIKGLLDVTCKT
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKYTLRKTTVSLQAANYLDIKGLLDVTCKT 122
Query: 311 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
VANMIKGKTPEEIRKTFNIKNDFT+ EE QVRKEN+WCEEK
Sbjct: 123 VANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>UNIPROTKB|E7ERH2 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0005829 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 HGNC:HGNC:10899
ChiTaRS:SKP1 EMBL:AC104109 EMBL:AC011336 IPI:IPI00979610
ProteinModelPortal:E7ERH2 SMR:E7ERH2 Ensembl:ENST00000519321
ArrayExpress:E7ERH2 Bgee:E7ERH2 Uniprot:E7ERH2
Length = 142
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 101/142 (71%), Positives = 107/142 (75%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP+IKLQSSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTC
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC 120
Query: 120 KTVANMIKGKTPEEIRKTFNIK 141
KTVANMIKGKTPEEIRKTFNIK
Sbjct: 121 KTVANMIKGKTPEEIRKTFNIK 142
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 96/140 (68%), Positives = 103/140 (73%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWA 250
+I +SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQW
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 251 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
T+H RTDDI WD +FLKVDQGTLFELILAANYLDIKGLLDVTCKT
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKT 122
Query: 311 VANMIKGKTPEEIRKTFNIK 330
VANMIKGKTPEEIRKTFNIK
Sbjct: 123 VANMIKGKTPEEIRKTFNIK 142
>WB|WBGene00004807 [details] [associations]
symbol:skr-1 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0008340 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0016477 GO:GO:0008406 GO:GO:0002119 GO:GO:0016246
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:VIQWCTY
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81072 EMBL:Z81084
PIR:T21573 RefSeq:NP_492513.1 ProteinModelPortal:G5ECU1 SMR:G5ECU1
IntAct:G5ECU1 EnsemblMetazoa:F46A9.5.1 EnsemblMetazoa:F46A9.5.2
EnsemblMetazoa:F46A9.5.3 GeneID:172775 KEGG:cel:CELE_F46A9.5
CTD:172775 WormBase:F46A9.5 NextBio:876957 Uniprot:G5ECU1
Length = 176
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 94/159 (59%), Positives = 109/159 (68%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXX---XXXXIVPLPNVNSAILRKVIQW 60
IK+ SSD EIF V + + S TI T++ +P+ NV ++IL+KVI W
Sbjct: 16 IKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISW 75
Query: 61 ATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 120
+H RTDDI SWD +FLKVDQGTLFELILAANYLDIKGLLDVTCK
Sbjct: 76 CNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCK 135
Query: 121 TVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
TVANMIKGK+PEEIR+TFNIKNDFT EEEQ+RKEN WC
Sbjct: 136 TVANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWC 174
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 93/157 (59%), Positives = 108/157 (68%)
Query: 197 SSDGEIFNVDFEIAKSSVTIKTMVXXXXXXX---XXXXIVPLPNVNSAILRKVIQWATYH 253
SSD EIF V + + S TI T++ +P+ NV ++IL+KVI W +H
Sbjct: 20 SSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISWCNHH 79
Query: 254 XXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 313
RTDDI SWD +FLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN
Sbjct: 80 HSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 139
Query: 314 MIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
MIKGK+PEEIR+TFNIKNDFT EEEQ+RKEN WCE+
Sbjct: 140 MIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWCED 176
>UNIPROTKB|G5ECU1 [details] [associations]
symbol:skr-1 "Protein SKR-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0008340 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0016477 GO:GO:0008406 GO:GO:0002119 GO:GO:0016246
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:VIQWCTY
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81072 EMBL:Z81084
PIR:T21573 RefSeq:NP_492513.1 ProteinModelPortal:G5ECU1 SMR:G5ECU1
IntAct:G5ECU1 EnsemblMetazoa:F46A9.5.1 EnsemblMetazoa:F46A9.5.2
EnsemblMetazoa:F46A9.5.3 GeneID:172775 KEGG:cel:CELE_F46A9.5
CTD:172775 WormBase:F46A9.5 NextBio:876957 Uniprot:G5ECU1
Length = 176
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 94/159 (59%), Positives = 109/159 (68%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXX---XXXXIVPLPNVNSAILRKVIQW 60
IK+ SSD EIF V + + S TI T++ +P+ NV ++IL+KVI W
Sbjct: 16 IKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISW 75
Query: 61 ATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 120
+H RTDDI SWD +FLKVDQGTLFELILAANYLDIKGLLDVTCK
Sbjct: 76 CNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCK 135
Query: 121 TVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
TVANMIKGK+PEEIR+TFNIKNDFT EEEQ+RKEN WC
Sbjct: 136 TVANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWC 174
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 93/157 (59%), Positives = 108/157 (68%)
Query: 197 SSDGEIFNVDFEIAKSSVTIKTMVXXXXXXX---XXXXIVPLPNVNSAILRKVIQWATYH 253
SSD EIF V + + S TI T++ +P+ NV ++IL+KVI W +H
Sbjct: 20 SSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISWCNHH 79
Query: 254 XXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 313
RTDDI SWD +FLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN
Sbjct: 80 HSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 139
Query: 314 MIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
MIKGK+PEEIR+TFNIKNDFT EEEQ+RKEN WCE+
Sbjct: 140 MIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWCED 176
>DICTYBASE|DDB_G0269230 [details] [associations]
symbol:fpaA "ubiquitin ligase subunit SKP1"
species:44689 "Dictyostelium discoideum" [GO:0005515 "protein
binding" evidence=IPI] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016567 "protein ubiquitination"
evidence=TAS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 dictyBase:DDB_G0269230
GO:GO:0005938 GO:GO:0005634 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0030587 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5201 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:U18063
EMBL:U73685 PIR:A55969 RefSeq:XP_646453.1 ProteinModelPortal:P52285
SMR:P52285 IntAct:P52285 GlycoSuiteDB:P52285 PRIDE:P52285
EnsemblProtists:DDB0191107 GeneID:8617413 KEGG:ddi:DDB_G0269230
OMA:KNWDADF ProtClustDB:CLSZ2729221 Uniprot:P52285
Length = 162
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 94/159 (59%), Positives = 108/159 (67%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQW 60
M +KL+SSD ++F ++ EIA SVTIK M+ +PLPNV S IL KV+ +
Sbjct: 1 MSLVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSP---IPLPNVTSTILEKVLDY 57
Query: 61 ATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 120
+H R DDI +D DF KVDQ TLFELILAANYLDIK LLDVTCK
Sbjct: 58 CRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCK 117
Query: 121 TVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
TVANMI+GKTPEEIRK FNIKNDFT EEEQ+RKENEWC
Sbjct: 118 TVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWC 156
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 94/161 (58%), Positives = 109/161 (67%)
Query: 191 SAILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWA 250
S + +SSD ++F ++ EIA SVTIK M+ +PLPNV S IL KV+ +
Sbjct: 2 SLVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSP---IPLPNVTSTILEKVLDYC 58
Query: 251 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
+H R DDI +D DF KVDQ TLFELILAANYLDIK LLDVTCKT
Sbjct: 59 RHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKT 118
Query: 311 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
VANMI+GKTPEEIRK FNIKNDFT EEEQ+RKENEWCE+K
Sbjct: 119 VANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWCEDK 159
>DICTYBASE|DDB_G0273615 [details] [associations]
symbol:fpaB-2 "ubiquitin ligase subunit SKP1"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 dictyBase:DDB_G0273615
dictyBase:DDB_G0273251 GO:GO:0005938 GO:GO:0005634
GenomeReviews:CM000151_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0030587 EMBL:AAFI02000011
EMBL:AAFI02000009 GO:GO:0006511 GO:GO:0019005 HSSP:P63208
eggNOG:COG5201 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 PIR:A55969
ProtClustDB:CLSZ2729221 EMBL:U73686 RefSeq:XP_644424.1
RefSeq:XP_644826.1 ProteinModelPortal:Q557E4 SMR:Q557E4
PRIDE:Q557E4 EnsemblProtists:DDB0185043 EnsemblProtists:DDB0266780
GeneID:8618928 GeneID:8619049 KEGG:ddi:DDB_G0273251
KEGG:ddi:DDB_G0273615 OMA:VIQWCTY Uniprot:Q557E4
Length = 162
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 94/159 (59%), Positives = 108/159 (67%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQW 60
M +KL+SSD ++F ++ EIA SVTIK M+ +PLPNV S IL KV+ +
Sbjct: 1 MSLVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAP---IPLPNVTSTILEKVLDY 57
Query: 61 ATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 120
+H R DDI +D DF KVDQ TLFELILAANYLDIK LLDVTCK
Sbjct: 58 CRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCK 117
Query: 121 TVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
TVANMI+GKTPEEIRK FNIKNDFT EEEQ+RKENEWC
Sbjct: 118 TVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWC 156
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 94/161 (58%), Positives = 109/161 (67%)
Query: 191 SAILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWA 250
S + +SSD ++F ++ EIA SVTIK M+ +PLPNV S IL KV+ +
Sbjct: 2 SLVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAP---IPLPNVTSTILEKVLDYC 58
Query: 251 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
+H R DDI +D DF KVDQ TLFELILAANYLDIK LLDVTCKT
Sbjct: 59 RHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKT 118
Query: 311 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
VANMI+GKTPEEIRK FNIKNDFT EEEQ+RKENEWCE+K
Sbjct: 119 VANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWCEDK 159
>DICTYBASE|DDB_G0273251 [details] [associations]
symbol:fpaB-1 "ubiquitin ligase subunit SKP1"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 dictyBase:DDB_G0273615
dictyBase:DDB_G0273251 GO:GO:0005938 GO:GO:0005634
GenomeReviews:CM000151_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0030587 EMBL:AAFI02000011
EMBL:AAFI02000009 GO:GO:0006511 GO:GO:0019005 HSSP:P63208
eggNOG:COG5201 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 PIR:A55969
ProtClustDB:CLSZ2729221 EMBL:U73686 RefSeq:XP_644424.1
RefSeq:XP_644826.1 ProteinModelPortal:Q557E4 SMR:Q557E4
PRIDE:Q557E4 EnsemblProtists:DDB0185043 EnsemblProtists:DDB0266780
GeneID:8618928 GeneID:8619049 KEGG:ddi:DDB_G0273251
KEGG:ddi:DDB_G0273615 OMA:VIQWCTY Uniprot:Q557E4
Length = 162
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 94/159 (59%), Positives = 108/159 (67%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQW 60
M +KL+SSD ++F ++ EIA SVTIK M+ +PLPNV S IL KV+ +
Sbjct: 1 MSLVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAP---IPLPNVTSTILEKVLDY 57
Query: 61 ATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 120
+H R DDI +D DF KVDQ TLFELILAANYLDIK LLDVTCK
Sbjct: 58 CRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCK 117
Query: 121 TVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
TVANMI+GKTPEEIRK FNIKNDFT EEEQ+RKENEWC
Sbjct: 118 TVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWC 156
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 94/161 (58%), Positives = 109/161 (67%)
Query: 191 SAILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWA 250
S + +SSD ++F ++ EIA SVTIK M+ +PLPNV S IL KV+ +
Sbjct: 2 SLVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAP---IPLPNVTSTILEKVLDYC 58
Query: 251 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
+H R DDI +D DF KVDQ TLFELILAANYLDIK LLDVTCKT
Sbjct: 59 RHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKT 118
Query: 311 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
VANMI+GKTPEEIRK FNIKNDFT EEEQ+RKENEWCE+K
Sbjct: 119 VANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWCEDK 159
>TAIR|locus:2204435 [details] [associations]
symbol:SKP1 "AT1G75950" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA;NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007140 "male meiosis" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0045910 "negative regulation of DNA recombination"
evidence=IMP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0007067 "mitosis" evidence=RCA;TAS] [GO:0042023
"DNA endoreduplication" evidence=RCA] [GO:0042752 "regulation of
circadian rhythm" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0046686 GO:GO:0019048
GO:GO:0007059 GO:GO:0000226 GO:GO:0009734 GO:GO:0009873
GO:GO:0005819 EMBL:AC007396 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0009524 GO:GO:0045910
PDB:3OGK PDB:3OGL PDB:3OGM PDBsum:3OGK PDBsum:3OGL PDBsum:3OGM
PDB:2P1N PDB:2P1O PDB:2P1Q PDBsum:2P1N PDBsum:2P1O PDBsum:2P1Q
EMBL:U60981 EMBL:U97020 EMBL:AF059294 EMBL:AY080884 EMBL:AY113971
EMBL:U70034 IPI:IPI00540205 PIR:T51309 RefSeq:NP_565123.1
UniGene:At.23531 PDB:2P1M PDB:2P1P PDB:3C6N PDB:3C6O PDB:3C6P
PDBsum:2P1M PDBsum:2P1P PDBsum:3C6N PDBsum:3C6O PDBsum:3C6P
ProteinModelPortal:Q39255 SMR:Q39255 DIP:DIP-31325N IntAct:Q39255
STRING:Q39255 PaxDb:Q39255 PRIDE:Q39255 EnsemblPlants:AT1G75950.1
GeneID:843928 KEGG:ath:AT1G75950 GeneFarm:4981 TAIR:At1g75950
InParanoid:Q39255 OMA:DDLKAWD PhylomeDB:Q39255
EvolutionaryTrace:Q39255 Genevestigator:Q39255 GermOnline:AT1G75950
Uniprot:Q39255
Length = 160
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 89/159 (55%), Positives = 106/159 (66%)
Query: 193 ILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 252
I+ KSSDGE F V+ +A S TI MV VPLPNV S IL KVI++
Sbjct: 6 IVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNG----VPLPNVTSKILAKVIEYCKR 61
Query: 253 HXXXXXXXXXXXXXXXRTDD-ISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 311
H +DD + +WDADF+K+DQ TLFELILAANYL+IK LLD+TC+TV
Sbjct: 62 HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTV 121
Query: 312 ANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
A+MIKGKTPEEIR TFNIKNDFT EEE+VR+EN+W E
Sbjct: 122 ADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 88/156 (56%), Positives = 105/156 (67%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
I L+SSDGE F V+ +A S TI MV VPLPNV S IL KVI++
Sbjct: 6 IVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNG----VPLPNVTSKILAKVIEYCKR 61
Query: 64 HXXXXXXXXXXXXXXXRTDD-ISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 122
H +DD + +WDADF+K+DQ TLFELILAANYL+IK LLD+TC+TV
Sbjct: 62 HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTV 121
Query: 123 ANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
A+MIKGKTPEEIR TFNIKNDFT EEE+VR+EN+W
Sbjct: 122 ADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQW 157
>FB|FBgn0034863 [details] [associations]
symbol:skpF "skpF" species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:AE013599 GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0004842 eggNOG:COG5201
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:AY118610 RefSeq:NP_611796.1 UniGene:Dm.18854 SMR:Q9W1Q0
IntAct:Q9W1Q0 MINT:MINT-783087 STRING:Q9W1Q0
EnsemblMetazoa:FBtr0072022 GeneID:37713 KEGG:dme:Dmel_CG12227
UCSC:CG12227-RA CTD:37713 FlyBase:FBgn0034863 InParanoid:Q9W1Q0
OMA:PVEAEND OrthoDB:EOG45QFWH GenomeRNAi:37713 NextBio:805037
Uniprot:Q9W1Q0
Length = 171
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 85/157 (54%), Positives = 104/157 (66%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQW 60
MP IKLQSSDGEIF D E AK S TIKT++ ++PLPNVNS IL+KV+ W
Sbjct: 1 MPVIKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAENDTLIPLPNVNSTILKKVLIW 60
Query: 61 ATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 120
A +H I+ WDA+FL +DQGTLFELILAANYLDI LL+ C
Sbjct: 61 AKHHREDIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACM 120
Query: 121 TVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENE 157
TVANMIKG+T EEIR+TF+I NDF+ +EE+ + E+E
Sbjct: 121 TVANMIKGRTTEEIRQTFHITNDFSPSEEDLMTMESE 157
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 80/155 (51%), Positives = 101/155 (65%)
Query: 196 KSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATYHXX 255
+SSDGEIF D E AK S TIKT++ ++PLPNVNS IL+KV+ WA +H
Sbjct: 7 QSSDGEIFETDIETAKCSSTIKTLLEDCPVEAENDTLIPLPNVNSTILKKVLIWAKHHRE 66
Query: 256 XXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMI 315
I+ WDA+FL +DQGTLFELILAANYLDI LL+ C TVANMI
Sbjct: 67 DIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMI 126
Query: 316 KGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
KG+T EEIR+TF+I NDF+ +EE+ + E+E +E
Sbjct: 127 KGRTTEEIRQTFHITNDFSPSEEDLMTMESEVPQE 161
>TAIR|locus:2165825 [details] [associations]
symbol:ASK2 "AT5G42190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;RCA;TAS] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0019048 GO:GO:0007059 GO:GO:0009734
GO:GO:0009873 GO:GO:0009793 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB017067 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
UniGene:At.23304 OMA:KNWDADF EMBL:U97021 EMBL:AF059295
EMBL:BT004798 EMBL:AK227773 IPI:IPI00540947 RefSeq:NP_568603.1
UniGene:At.71056 ProteinModelPortal:Q9FHW7 SMR:Q9FHW7
DIP:DIP-31326N IntAct:Q9FHW7 STRING:Q9FHW7 PaxDb:Q9FHW7
PRIDE:Q9FHW7 EnsemblPlants:AT5G42190.1 GeneID:834224
KEGG:ath:AT5G42190 GeneFarm:4982 TAIR:At5g42190 InParanoid:Q9FHW7
PhylomeDB:Q9FHW7 ProtClustDB:CLSN2917730 Genevestigator:Q9FHW7
GermOnline:AT5G42190 Uniprot:Q9FHW7
Length = 171
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 88/166 (53%), Positives = 109/166 (65%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
I L+SSDGE F +D +A S TIK M+ +PLPNV S IL KVI++
Sbjct: 7 ITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNG----IPLPNVTSKILSKVIEYCKR 62
Query: 64 HXXXXXXXXXXXXXXXRT-----------DDISSWDADFLKVDQGTLFELILAANYLDIK 112
H T +D+ +WD++F+KVDQGTLF+LILAANYL+IK
Sbjct: 63 HVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIK 122
Query: 113 GLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
GLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT EEE+VR+EN+W
Sbjct: 123 GLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQW 168
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 89/169 (52%), Positives = 109/169 (64%)
Query: 193 ILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 252
I KSSDGE F +D +A S TIK M+ +PLPNV S IL KVI++
Sbjct: 7 ITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNG----IPLPNVTSKILSKVIEYCKR 62
Query: 253 HXXXXXXXXXXXXXXXRT-----------DDISSWDADFLKVDQGTLFELILAANYLDIK 301
H T +D+ +WD++F+KVDQGTLF+LILAANYL+IK
Sbjct: 63 HVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIK 122
Query: 302 GLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
GLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDFT EEE+VR+EN+W E
Sbjct: 123 GLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
>UNIPROTKB|G4N3J5 [details] [associations]
symbol:MGG_04978 "E3 ubiquitin ligase complex SCF subunit
scon-3" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:CM001233 GO:GO:0016874 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
RefSeq:XP_003712477.1 ProteinModelPortal:G4N3J5 SMR:G4N3J5
EnsemblFungi:MGG_04978T0 GeneID:2675549 KEGG:mgr:MGG_04978
Uniprot:G4N3J5
Length = 168
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 81/159 (50%), Positives = 103/159 (64%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQW 60
+ + LQS+DG+ VD +A S IK ++ +P+PNV+ A+LRKV++W
Sbjct: 6 LQKVNLQSNDGQSIEVDRAVACRSRLIKDLIGDLGEEMVASTPIPIPNVSEAVLRKVLEW 65
Query: 61 ATYHXXX-XXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
+H +T DI WD F++VDQ LFE+ILA+NYLDIK LLDV C
Sbjct: 66 CEHHRNDPVQTSDEDSESRKKTTDIDEWDQKFMQVDQEMLFEIILASNYLDIKPLLDVGC 125
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
KTVANMIKGK+PEEIRKTFNI NDFT EEEQ+R+ENEW
Sbjct: 126 KTVANMIKGKSPEEIRKTFNITNDFTPEEEEQIRRENEW 164
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 80/157 (50%), Positives = 103/157 (65%)
Query: 196 KSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATYHXX 255
+S+DG+ VD +A S IK ++ +P+PNV+ A+LRKV++W +H
Sbjct: 12 QSNDGQSIEVDRAVACRSRLIKDLIGDLGEEMVASTPIPIPNVSEAVLRKVLEWCEHHRN 71
Query: 256 X-XXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 314
+T DI WD F++VDQ LFE+ILA+NYLDIK LLDV CKTVANM
Sbjct: 72 DPVQTSDEDSESRKKTTDIDEWDQKFMQVDQEMLFEIILASNYLDIKPLLDVGCKTVANM 131
Query: 315 IKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
IKGK+PEEIRKTFNI NDFT EEEQ+R+ENEW E++
Sbjct: 132 IKGKSPEEIRKTFNITNDFTPEEEEQIRRENEWAEDR 168
>ASPGD|ASPL0000044827 [details] [associations]
symbol:sconC species:162425 "Emericella nidulans"
[GO:0006790 "sulfur compound metabolic process" evidence=IEP]
[GO:0045116 "protein neddylation" evidence=IEA] [GO:0007095
"mitotic G2 DNA damage checkpoint" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007035 "vacuolar acidification" evidence=IEA] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045841 "negative regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0000920 "cytokinetic cell separation"
evidence=IEA] [GO:0000921 "septin ring assembly" evidence=IEA]
[GO:0006998 "nuclear envelope organization" evidence=IEA]
[GO:0051382 "kinetochore assembly" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0043254 "regulation of protein
complex assembly" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0007096 "regulation of exit
from mitosis" evidence=IEA] [GO:0003688 "DNA replication origin
binding" evidence=IEA] [GO:0043295 "glutathione binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043291 "RAVE
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031518 "CBF3 complex" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 EMBL:BN001307 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AACD01000038 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:U75874
RefSeq:XP_659906.1 HSSP:P34991 ProteinModelPortal:Q5BAX8 SMR:Q5BAX8
STRING:Q5BAX8 GeneID:2874613 KEGG:ani:AN2302.2 OMA:IMNILEV
OrthoDB:EOG4T1MX2 Uniprot:Q5BAX8
Length = 161
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 193 ILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 252
++ S+DG+ V ++A+ S+ IK M+ +P+PNV+ +L KV++W +
Sbjct: 6 LVMTSNDGKNIEVPRDVAERSLLIKNMLEDLGDPTEP---IPIPNVSENVLSKVLEWCAH 62
Query: 253 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 312
H +T DI WD F++VDQ LFE+ILAANYLDIK LLD+ CKTVA
Sbjct: 63 HRNDPPSSADDDDSRRKTTDIEEWDQKFMQVDQEMLFEIILAANYLDIKPLLDIGCKTVA 122
Query: 313 NMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
NMIKGK+PEEIRKTFNI+NDFT EE+Q+R+ENEW E++
Sbjct: 123 NMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEDR 161
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 76/153 (49%), Positives = 101/153 (66%)
Query: 6 LQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATYHX 65
+ S+DG+ V ++A+ S+ IK M+ +P+PNV+ +L KV++W +H
Sbjct: 8 MTSNDGKNIEVPRDVAERSLLIKNMLEDLGDPTEP---IPIPNVSENVLSKVLEWCAHHR 64
Query: 66 XXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 125
+T DI WD F++VDQ LFE+ILAANYLDIK LLD+ CKTVANM
Sbjct: 65 NDPPSSADDDDSRRKTTDIEEWDQKFMQVDQEMLFEIILAANYLDIKPLLDIGCKTVANM 124
Query: 126 IKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
IKGK+PEEIRKTFNI+NDFT EE+Q+R+ENEW
Sbjct: 125 IKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEW 157
>POMBASE|SPBC409.05 [details] [associations]
symbol:skp1 "SCF ubiquitin ligase complex subunit Skp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000920 "cytokinetic
cell separation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006998 "nuclear envelope organization"
evidence=IMP] [GO:0007035 "vacuolar acidification" evidence=ISO]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IMP]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0042493
"response to drug" evidence=IGI] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IC] [GO:0043291 "RAVE complex" evidence=IPI]
[GO:0045841 "negative regulation of mitotic metaphase/anaphase
transition" evidence=IMP] [GO:0070072 "vacuolar proton-transporting
V-type ATPase complex assembly" evidence=TAS] [GO:2000060 "positive
regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 PomBase:SPBC409.05
GO:GO:0005829 GO:GO:0005634 GO:GO:0005773 GO:GO:0007095
GO:GO:0007067 GO:GO:0042493 EMBL:CU329671 GenomeReviews:CU329671_GR
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006998
GO:GO:0030163 GO:GO:0000920 GO:GO:0006511 GO:GO:0019005
GO:GO:0070072 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:2000060 GO:GO:0007035 GO:GO:0045841
EMBL:AB027472 GO:GO:0043291 OMA:VIQWCTY OrthoDB:EOG4T1MX2
EMBL:AB067633 EMBL:AF071066 PIR:T45459 RefSeq:NP_595455.1
ProteinModelPortal:Q9Y709 SMR:Q9Y709 IntAct:Q9Y709 STRING:Q9Y709
EnsemblFungi:SPBC409.05.1 GeneID:2540917 KEGG:spo:SPBC409.05
NextBio:20802032 Uniprot:Q9Y709
Length = 161
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 84/160 (52%), Positives = 103/160 (64%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQW 60
M IKL SSD E F VD IA+ S+ IK M+ +PLPNV+S +LRKV++W
Sbjct: 1 MSKIKLISSDNEEFVVDQLIAERSMLIKNMLEDVGEINVP---IPLPNVSSNVLRKVLEW 57
Query: 61 ATYHXXXXXXXXXXXXXXX--RTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVT 118
+H ++ DI WD F+ VDQ LFE++LA+NYLDIK LLD
Sbjct: 58 CEHHKNDLYSGTEEESDIRLKKSTDIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTG 117
Query: 119 CKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
CKTVANMI+GK+PE+IRKTFNI NDFT EEEQ+RKENEW
Sbjct: 118 CKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEW 157
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 81/157 (51%), Positives = 102/157 (64%)
Query: 197 SSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATYHXXX 256
SSD E F VD IA+ S+ IK M+ +PLPNV+S +LRKV++W +H
Sbjct: 8 SSDNEEFVVDQLIAERSMLIKNMLEDVGEINVP---IPLPNVSSNVLRKVLEWCEHHKND 64
Query: 257 XXXXXXXXXXXX--RTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 314
++ DI WD F+ VDQ LFE++LA+NYLDIK LLD CKTVANM
Sbjct: 65 LYSGTEEESDIRLKKSTDIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVANM 124
Query: 315 IKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
I+GK+PE+IRKTFNI NDFT EEEQ+RKENEW E++
Sbjct: 125 IRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWAEDR 161
>WB|WBGene00004808 [details] [associations]
symbol:skr-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0007126 "meiosis" evidence=IMP]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0000239 "pachytene" evidence=IMP] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0008340 GO:GO:0009792
GO:GO:0000132 GO:GO:0040007 GO:GO:0018991 GO:GO:0040010
GO:GO:0008285 GO:GO:0008406 GO:GO:0002119 GO:GO:0040011
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 GO:GO:0019005 GO:GO:0045132 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 OMA:IRRAFNI GO:GO:0000239
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81084 EMBL:AF440506
PIR:T22268 RefSeq:NP_492512.1 UniGene:Cel.193 SMR:G5EDD8
IntAct:G5EDD8 EnsemblMetazoa:F46A9.4 GeneID:172773
KEGG:cel:CELE_F46A9.4 CTD:172773 WormBase:F46A9.4 NextBio:876949
Uniprot:G5EDD8
Length = 174
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 84/160 (52%), Positives = 102/160 (63%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTM-VXXXXXXXXXXXIVPLP--NVNSAILRKVIQW 60
IK+ SSD EIF V + + S T+ T+ V P+P NV ++IL+KVI W
Sbjct: 16 IKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQNVTASILKKVINW 75
Query: 61 ATYHXXXXXXXXXXXXXXXRTD-DISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
T H +TD I WD FL +DQGTLFELILAANYLDIKGLLDV C
Sbjct: 76 CTKHQSDPIPTEDSEK---KTDGSIQDWDKKFLDIDQGTLFELILAANYLDIKGLLDVAC 132
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
++VANMIKGK+P+EIR+ FNIK+DFT E EQ+RKEN WC
Sbjct: 133 QSVANMIKGKSPDEIRRAFNIKDDFTAEEREQIRKENAWC 172
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 84/165 (50%), Positives = 103/165 (62%)
Query: 190 NSAILRKSSDGEIFNVDFEIAKSSVTIKTM-VXXXXXXXXXXXIVPLP--NVNSAILRKV 246
N I SSD EIF V + + S T+ T+ V P+P NV ++IL+KV
Sbjct: 13 NREIKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQNVTASILKKV 72
Query: 247 IQWATYHXXXXXXXXXXXXXXXRTD-DISSWDADFLKVDQGTLFELILAANYLDIKGLLD 305
I W T H +TD I WD FL +DQGTLFELILAANYLDIKGLLD
Sbjct: 73 INWCTKHQSDPIPTEDSEK---KTDGSIQDWDKKFLDIDQGTLFELILAANYLDIKGLLD 129
Query: 306 VTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
V C++VANMIKGK+P+EIR+ FNIK+DFT E EQ+RKEN WC++
Sbjct: 130 VACQSVANMIKGKSPDEIRRAFNIKDDFTAEEREQIRKENAWCDD 174
>UNIPROTKB|G5EDD8 [details] [associations]
symbol:skr-2 "SKR-2" species:6239 "Caenorhabditis elegans"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0008340 GO:GO:0009792 GO:GO:0000132
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0008285
GO:GO:0008406 GO:GO:0002119 GO:GO:0040011 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035 GO:GO:0006511
GO:GO:0019005 GO:GO:0045132 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:IRRAFNI
GO:GO:0000239 GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81084
EMBL:AF440506 PIR:T22268 RefSeq:NP_492512.1 UniGene:Cel.193
SMR:G5EDD8 IntAct:G5EDD8 EnsemblMetazoa:F46A9.4 GeneID:172773
KEGG:cel:CELE_F46A9.4 CTD:172773 WormBase:F46A9.4 NextBio:876949
Uniprot:G5EDD8
Length = 174
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 84/160 (52%), Positives = 102/160 (63%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTM-VXXXXXXXXXXXIVPLP--NVNSAILRKVIQW 60
IK+ SSD EIF V + + S T+ T+ V P+P NV ++IL+KVI W
Sbjct: 16 IKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQNVTASILKKVINW 75
Query: 61 ATYHXXXXXXXXXXXXXXXRTD-DISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
T H +TD I WD FL +DQGTLFELILAANYLDIKGLLDV C
Sbjct: 76 CTKHQSDPIPTEDSEK---KTDGSIQDWDKKFLDIDQGTLFELILAANYLDIKGLLDVAC 132
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
++VANMIKGK+P+EIR+ FNIK+DFT E EQ+RKEN WC
Sbjct: 133 QSVANMIKGKSPDEIRRAFNIKDDFTAEEREQIRKENAWC 172
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 84/165 (50%), Positives = 103/165 (62%)
Query: 190 NSAILRKSSDGEIFNVDFEIAKSSVTIKTM-VXXXXXXXXXXXIVPLP--NVNSAILRKV 246
N I SSD EIF V + + S T+ T+ V P+P NV ++IL+KV
Sbjct: 13 NREIKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQNVTASILKKV 72
Query: 247 IQWATYHXXXXXXXXXXXXXXXRTD-DISSWDADFLKVDQGTLFELILAANYLDIKGLLD 305
I W T H +TD I WD FL +DQGTLFELILAANYLDIKGLLD
Sbjct: 73 INWCTKHQSDPIPTEDSEK---KTDGSIQDWDKKFLDIDQGTLFELILAANYLDIKGLLD 129
Query: 306 VTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
V C++VANMIKGK+P+EIR+ FNIK+DFT E EQ+RKEN WC++
Sbjct: 130 VACQSVANMIKGKSPDEIRRAFNIKDDFTAEEREQIRKENAWCDD 174
>SGD|S000002736 [details] [associations]
symbol:SKP1 "Evolutionarily conserved kinetochore protein"
species:4932 "Saccharomyces cerevisiae" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0000921 "septin ring assembly" evidence=IMP] [GO:0000776
"kinetochore" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006461 "protein complex assembly" evidence=IDA]
[GO:0003688 "DNA replication origin binding" evidence=IPI]
[GO:0045116 "protein neddylation" evidence=IGI;IMP] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0031518 "CBF3 complex" evidence=IGI;IDA;IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0043291 "RAVE complex" evidence=IPI] [GO:0051382 "kinetochore
assembly" evidence=IMP;IDA] [GO:0043254 "regulation of protein
complex assembly" evidence=IPI] [GO:0007035 "vacuolar
acidification" evidence=IGI;IMP] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007096 "regulation of
exit from mitosis" evidence=IMP;IPI] [GO:0000910 "cytokinesis"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 SGD:S000002736 GO:GO:0005634 GO:GO:0005773
GO:GO:0000086 GO:GO:0000776 GO:GO:0000082 EMBL:BK006938
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0003688
GO:GO:0000910 GO:GO:0019005 GO:GO:0007096 GO:GO:0000921
GO:GO:0042787 GO:GO:0051382 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:U32517 GO:GO:0000777 GO:GO:0007035
GO:GO:0031518 GO:GO:0031146 PDB:1NEX PDB:3MKS PDB:3V7D PDBsum:1NEX
PDBsum:3MKS PDBsum:3V7D GO:GO:0045116 GO:GO:0043254
RefSeq:NP_010619.3 GeneID:851932 KEGG:sce:YDR332W
RefSeq:NP_010615.3 GeneID:851928 KEGG:sce:YDR328C GO:GO:0043291
GeneTree:ENSGT00390000012652 OrthoDB:EOG4T1MX2 EMBL:U43179
EMBL:U61764 EMBL:AY557730 PIR:S59793 ProteinModelPortal:P52286
SMR:P52286 DIP:DIP-1236N IntAct:P52286 MINT:MINT-384072
STRING:P52286 PaxDb:P52286 PeptideAtlas:P52286 PRIDE:P52286
EnsemblFungi:YDR328C OMA:PVEIANG EvolutionaryTrace:P52286
NextBio:969983 Genevestigator:P52286 GermOnline:YDR328C
Uniprot:P52286
Length = 194
Score = 342 (125.4 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 63/120 (52%), Positives = 86/120 (71%)
Query: 232 IVPLPNVNSAILRKVIQWATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFEL 291
++P+PNV S++L+KVI+WA +H ++ + SWD +FLKVDQ L+E+
Sbjct: 76 VMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR-KSAPVDSWDREFLKVDQEMLYEI 134
Query: 292 ILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
ILAANYL+IK LLD CK VA MI+G++PEEIR+TFNI NDFT EE +R+ENEW E++
Sbjct: 135 ILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWAEDR 194
Score = 333 (122.3 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 62/116 (53%), Positives = 83/116 (71%)
Query: 43 IVPLPNVNSAILRKVIQWATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFEL 102
++P+PNV S++L+KVI+WA +H ++ + SWD +FLKVDQ L+E+
Sbjct: 76 VMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR-KSAPVDSWDREFLKVDQEMLYEI 134
Query: 103 ILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
ILAANYL+IK LLD CK VA MI+G++PEEIR+TFNI NDFT EE +R+ENEW
Sbjct: 135 ILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEW 190
Score = 56 (24.8 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 3 NIKLQSSDGEIFNVDFEIAKSSVTIK 28
N+ L S +GE F VD +IA+ S+ +K
Sbjct: 5 NVVLVSGEGERFTVDKKIAERSLLLK 30
Score = 53 (23.7 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 189 VNSAILRKSSDGEIFNVDFEIAKSSVTIK 217
V S ++ S +GE F VD +IA+ S+ +K
Sbjct: 2 VTSNVVLVSGEGERFTVDKKIAERSLLLK 30
>WB|WBGene00004809 [details] [associations]
symbol:skr-3 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0006952
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 OMA:ENDFTHE EMBL:Z83109
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF440507 PIR:T22198
RefSeq:NP_507059.1 UniGene:Cel.192 ProteinModelPortal:G5EE67
SMR:G5EE67 EnsemblMetazoa:F44G3.6.1 EnsemblMetazoa:F44G3.6.2
GeneID:180081 KEGG:cel:CELE_F44G3.6 CTD:180081 WormBase:F44G3.6
NextBio:908014 Uniprot:G5EE67
Length = 167
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 77/159 (48%), Positives = 98/159 (61%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXX---XXXXXXXIVPLPNVNSAILRKVIQW 60
IKL SSD + F V ++ S TI ++ +PL V S IL K+I W
Sbjct: 10 IKLTSSDDKTFTVSRKVISQSKTITDIIQNLGIEESGSTSEDTIPLQKVTSTILEKIITW 69
Query: 61 ATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 120
+H +T DIS WDA+F+KVDQGTLFE+ILAANYLDI+GLLDVT +
Sbjct: 70 CEHHADDEPKKVDENK---KTVDISEWDAEFMKVDQGTLFEIILAANYLDIRGLLDVTTQ 126
Query: 121 TVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
VANM+KGKTP +IR FNI+NDF++ E E ++KEN WC
Sbjct: 127 NVANMMKGKTPSQIRTLFNIENDFSEEEREAMKKENAWC 165
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 75/157 (47%), Positives = 97/157 (61%)
Query: 197 SSDGEIFNVDFEIAKSSVTIKTMVXXXX---XXXXXXXIVPLPNVNSAILRKVIQWATYH 253
SSD + F V ++ S TI ++ +PL V S IL K+I W +H
Sbjct: 14 SSDDKTFTVSRKVISQSKTITDIIQNLGIEESGSTSEDTIPLQKVTSTILEKIITWCEHH 73
Query: 254 XXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 313
+T DIS WDA+F+KVDQGTLFE+ILAANYLDI+GLLDVT + VAN
Sbjct: 74 ADDEPKKVDENK---KTVDISEWDAEFMKVDQGTLFEIILAANYLDIRGLLDVTTQNVAN 130
Query: 314 MIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
M+KGKTP +IR FNI+NDF++ E E ++KEN WCE+
Sbjct: 131 MMKGKTPSQIRTLFNIENDFSEEEREAMKKENAWCED 167
>FB|FBgn0026175 [details] [associations]
symbol:skpC "skpC" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:AE014298 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 eggNOG:COG5201 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 OrthoDB:EOG4K6DMM
EMBL:AF220068 EMBL:BT120007 RefSeq:NP_608358.1 UniGene:Dm.26675
SMR:Q9VWC4 IntAct:Q9VWC4 MINT:MINT-763311 STRING:Q9VWC4
EnsemblMetazoa:FBtr0074797 GeneID:32996 KEGG:dme:Dmel_CG11941
UCSC:CG11941-RA CTD:32996 FlyBase:FBgn0026175 InParanoid:Q9VWC4
OMA:HMIEESS GenomeRNAi:32996 NextBio:781428 Uniprot:Q9VWC4
Length = 158
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 76/143 (53%), Positives = 96/143 (67%)
Query: 2 PNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWA 61
P IKL+SSDG IF+ + AK S TIKTM+ IVPLP VN+ IL K++ W
Sbjct: 4 PTIKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLPKVNAFILSKILTWI 63
Query: 62 TYHXXXXXXXXXXXXXXXRTD-DISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 120
+H ++ DIS+WDA+F+ VDQ TLFE+ILAANYL+IKGL+D+ CK
Sbjct: 64 YHHKDDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCK 123
Query: 121 TVANMIKGKTPEEIRKTFNIKND 143
TVANMI+GKTPEEIR TFNI ++
Sbjct: 124 TVANMIRGKTPEEIRHTFNIPDE 146
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 72/138 (52%), Positives = 92/138 (66%)
Query: 196 KSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATYHXX 255
+SSDG IF+ + AK S TIKTM+ IVPLP VN+ IL K++ W +H
Sbjct: 9 ESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLPKVNAFILSKILTWIYHHKD 68
Query: 256 XXXXXXXXXXXXXRTD-DISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 314
++ DIS+WDA+F+ VDQ TLFE+ILAANYL+IKGL+D+ CKTVANM
Sbjct: 69 DDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANM 128
Query: 315 IKGKTPEEIRKTFNIKND 332
I+GKTPEEIR TFNI ++
Sbjct: 129 IRGKTPEEIRHTFNIPDE 146
>TAIR|locus:2198621 [details] [associations]
symbol:SK4 "AT1G20140" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005737 GO:GO:0005730
GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0019005 EMBL:AC022472 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
UniGene:At.26484 ProtClustDB:CLSN2687877 EMBL:AY058205
EMBL:AY098980 IPI:IPI00526578 PIR:B86335 RefSeq:NP_564105.1
UniGene:At.26612 ProteinModelPortal:Q9LNT9 SMR:Q9LNT9 IntAct:Q9LNT9
STRING:Q9LNT9 PRIDE:Q9LNT9 EnsemblPlants:AT1G20140.1 GeneID:838604
KEGG:ath:AT1G20140 TAIR:At1g20140 InParanoid:Q9LNT9 OMA:SAENDEL
Genevestigator:Q9LNT9 Uniprot:Q9LNT9
Length = 163
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 76/160 (47%), Positives = 101/160 (63%)
Query: 193 ILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 252
I+ KSSDGE F ++ +A S TIK M+ +PLPNV AIL KVI++
Sbjct: 8 IILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNG----IPLPNVTGAILAKVIEYCKK 63
Query: 253 HXXXXXXXXXXXXX--XXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
H D++ +WD++F+KVDQ TLF+LILAANYL+I GLLD+TCK
Sbjct: 64 HVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKA 123
Query: 311 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
VA+ ++GKTPE++R FNIKND+T EE +VR EN+W E
Sbjct: 124 VADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 75/157 (47%), Positives = 100/157 (63%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
I L+SSDGE F ++ +A S TIK M+ +PLPNV AIL KVI++
Sbjct: 8 IILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNG----IPLPNVTGAILAKVIEYCKK 63
Query: 64 HXXXXXXXXXXXXX--XXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 121
H D++ +WD++F+KVDQ TLF+LILAANYL+I GLLD+TCK
Sbjct: 64 HVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKA 123
Query: 122 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
VA+ ++GKTPE++R FNIKND+T EE +VR EN+W
Sbjct: 124 VADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKW 160
>FB|FBgn0026174 [details] [associations]
symbol:skpD "skpD" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 HSSP:P34991 EMBL:AY070797 ProteinModelPortal:Q8T976
STRING:Q8T976 FlyBase:FBgn0026174 InParanoid:Q8T976
OrthoDB:EOG4K6DMM Bgee:Q8T976 Uniprot:Q8T976
Length = 182
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 73/143 (51%), Positives = 96/143 (67%)
Query: 2 PNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWA 61
P IKL+SSDG IF+ + + AK S TIKTM+ +VPLP VN+ IL K++ WA
Sbjct: 28 PTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAFILDKILTWA 87
Query: 62 TYHXXXXXXXXXXXXXXXRTD-DISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 120
+H ++ DIS WDA+F+ VDQ LFE+ +AANYL+IKGL D+ CK
Sbjct: 88 YHHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCK 147
Query: 121 TVANMIKGKTPEEIRKTFNIKND 143
T+ANMI+GKTPEEIR+TFNI++D
Sbjct: 148 TLANMIRGKTPEEIRQTFNIEDD 170
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 70/148 (47%), Positives = 98/148 (66%)
Query: 187 PNVNSAILR-KSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRK 245
P +++ ++ +SSDG IF+ + + AK S TIKTM+ +VPLP VN+ IL K
Sbjct: 23 PKMDAPTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAFILDK 82
Query: 246 VIQWATYHXXXXXXXXXXXXXXXRTD-DISSWDADFLKVDQGTLFELILAANYLDIKGLL 304
++ WA +H ++ DIS WDA+F+ VDQ LFE+ +AANYL+IKGL
Sbjct: 83 ILTWAYHHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLE 142
Query: 305 DVTCKTVANMIKGKTPEEIRKTFNIKND 332
D+ CKT+ANMI+GKTPEEIR+TFNI++D
Sbjct: 143 DLCCKTLANMIRGKTPEEIRQTFNIEDD 170
>TAIR|locus:2124281 [details] [associations]
symbol:SK11 "AT4G34210" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 EMBL:AL021961
EMBL:AL161585 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ446893 EMBL:DQ653243 IPI:IPI00541308
PIR:T05415 RefSeq:NP_567959.1 UniGene:At.54598
ProteinModelPortal:O49484 SMR:O49484 IntAct:O49484 STRING:O49484
EnsemblPlants:AT4G34210.1 GeneID:829569 KEGG:ath:AT4G34210
TAIR:At4g34210 InParanoid:O49484 OMA:HHVDEAN PhylomeDB:O49484
ProtClustDB:CLSN2689755 Genevestigator:O49484 Uniprot:O49484
Length = 152
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 79/155 (50%), Positives = 99/155 (63%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
I L SSDG+ F V+ +A S TI MV +PL NV S IL KVI++
Sbjct: 6 IVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADG----IPLANVESKILVKVIEYCKK 61
Query: 64 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 123
H +D+++WD F+ ++Q T+FELILAANYL+IK LLD+TC+TVA
Sbjct: 62 HHVDEANPISE-------EDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVA 114
Query: 124 NMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
+MIKGKTPEEIR TFNI+NDFT EEE VRKEN+W
Sbjct: 115 DMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQW 149
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 79/158 (50%), Positives = 100/158 (63%)
Query: 193 ILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 252
I+ SSDG+ F V+ +A S TI MV +PL NV S IL KVI++
Sbjct: 6 IVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADG----IPLANVESKILVKVIEYCKK 61
Query: 253 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 312
H +D+++WD F+ ++Q T+FELILAANYL+IK LLD+TC+TVA
Sbjct: 62 HHVDEANPISE-------EDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVA 114
Query: 313 NMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
+MIKGKTPEEIR TFNI+NDFT EEE VRKEN+W E
Sbjct: 115 DMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
>TAIR|locus:2050281 [details] [associations]
symbol:SK3 "AT2G25700" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC006053
EMBL:AY052700 EMBL:AY139806 IPI:IPI00526397 PIR:F84651
RefSeq:NP_565604.1 UniGene:At.26484 ProteinModelPortal:Q9SL93
SMR:Q9SL93 IntAct:Q9SL93 STRING:Q9SL93 EnsemblPlants:AT2G25700.1
GeneID:817111 KEGG:ath:AT2G25700 TAIR:At2g25700 InParanoid:Q9SL93
OMA:CCKTIAN ProtClustDB:CLSN2687877 Genevestigator:Q9SL93
Uniprot:Q9SL93
Length = 163
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 74/160 (46%), Positives = 98/160 (61%)
Query: 193 ILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 252
I+ KSSDGE F V+ +A S TIK M+ +PLPNV AIL KVI++
Sbjct: 8 IILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNG----IPLPNVTGAILAKVIEYCKK 63
Query: 253 HXXXXXXXXXXXXXXXRTD--DISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 310
H T+ ++ +WD DF+KVD TLF+L+ AANYL+I GLLD+TCK
Sbjct: 64 HVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKA 123
Query: 311 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
VA+ ++GKTP ++R+ FNIKND+T EE +VR EN W E
Sbjct: 124 VADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 73/157 (46%), Positives = 97/157 (61%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
I L+SSDGE F V+ +A S TIK M+ +PLPNV AIL KVI++
Sbjct: 8 IILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNG----IPLPNVTGAILAKVIEYCKK 63
Query: 64 HXXXXXXXXXXXXXXXRTD--DISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 121
H T+ ++ +WD DF+KVD TLF+L+ AANYL+I GLLD+TCK
Sbjct: 64 HVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKA 123
Query: 122 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
VA+ ++GKTP ++R+ FNIKND+T EE +VR EN W
Sbjct: 124 VADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRW 160
>TAIR|locus:2139504 [details] [associations]
symbol:SK12 "AT4G34470" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 EMBL:AL161585
EMBL:AL023094 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 ProtClustDB:CLSN2689755 IPI:IPI00526402 PIR:T05267
RefSeq:NP_567967.1 UniGene:At.65453 ProteinModelPortal:O65674
SMR:O65674 IntAct:O65674 STRING:O65674 EnsemblPlants:AT4G34470.1
GeneID:829598 KEGG:ath:AT4G34470 TAIR:At4g34470 InParanoid:O65674
OMA:IRRAFNI PhylomeDB:O65674 Genevestigator:O65674 Uniprot:O65674
Length = 152
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 79/156 (50%), Positives = 98/156 (62%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWAT- 62
I L SSDG+ F V+ +A S TI MV +PL NV S IL KVI++
Sbjct: 6 IVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADG----IPLANVESKILVKVIEYCKK 61
Query: 63 YHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 122
YH +D++ WD F+ ++Q T+FELILAANYL+IK L D+TC+TV
Sbjct: 62 YHVDEANPISE--------EDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTV 113
Query: 123 ANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
A+MIKGKTPEEIR TFNI+NDFT EEE VRKEN+W
Sbjct: 114 ADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQW 149
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 79/159 (49%), Positives = 99/159 (62%)
Query: 193 ILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWAT- 251
I+ SSDG+ F V+ +A S TI MV +PL NV S IL KVI++
Sbjct: 6 IVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADG----IPLANVESKILVKVIEYCKK 61
Query: 252 YHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 311
YH +D++ WD F+ ++Q T+FELILAANYL+IK L D+TC+TV
Sbjct: 62 YHVDEANPISE--------EDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTV 113
Query: 312 ANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
A+MIKGKTPEEIR TFNI+NDFT EEE VRKEN+W E
Sbjct: 114 ADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
>CGD|CAL0001786 [details] [associations]
symbol:SKP1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0043291 "RAVE complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0031518 "CBF3 complex"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0045116 "protein neddylation" evidence=IEA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0007035 "vacuolar acidification"
evidence=IEA] [GO:0000920 "cytokinetic cell separation"
evidence=IEA] [GO:0045841 "negative regulation of mitotic
metaphase/anaphase transition" evidence=IEA] [GO:0000921 "septin
ring assembly" evidence=IEA] [GO:0006998 "nuclear envelope
organization" evidence=IEA] [GO:0051382 "kinetochore assembly"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0043254 "regulation of protein complex assembly" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0007096 "regulation of exit from mitosis" evidence=IEA]
[GO:0003688 "DNA replication origin binding" evidence=IEA]
[GO:0019237 "centromeric DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 CGD:CAL0001786
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
EMBL:AACQ01000115 EMBL:AACQ01000111 RefSeq:XP_713872.1
RefSeq:XP_714072.1 ProteinModelPortal:Q59WE2 SMR:Q59WE2
STRING:Q59WE2 GeneID:3644272 GeneID:3644485 KEGG:cal:CaO19.11905
KEGG:cal:CaO19.4427 Uniprot:Q59WE2
Length = 164
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 70/156 (44%), Positives = 96/156 (61%)
Query: 197 SSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWATYHXX 255
SSD E F V+ +IA+ S+ IK M+ +P PNV + +L KV++W +H
Sbjct: 10 SSDNEKFPVEPKIAEKSILIKNMINDLHPDGLEEDFEIPTPNVRANVLCKVLEWCEHHKN 69
Query: 256 XXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMI 315
++ + WD +FLKVDQ L+E+ILAANYL+IK LL+ CK VA MI
Sbjct: 70 TVFQDDEDEDAK-KSVPVEEWDRNFLKVDQEMLYEIILAANYLNIKPLLESGCKMVAEMI 128
Query: 316 KGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
K K+PEE+R+TFNI NDF+ EE +RKENEW E++
Sbjct: 129 KSKSPEELRRTFNIINDFSPEEEAAIRKENEWAEDR 164
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 70/158 (44%), Positives = 96/158 (60%)
Query: 2 PNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQW 60
P + + SSD E F V+ +IA+ S+ IK M+ +P PNV + +L KV++W
Sbjct: 4 PKVIIVSSDNEKFPVEPKIAEKSILIKNMINDLHPDGLEEDFEIPTPNVRANVLCKVLEW 63
Query: 61 ATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 120
+H ++ + WD +FLKVDQ L+E+ILAANYL+IK LL+ CK
Sbjct: 64 CEHHKNTVFQDDEDEDAK-KSVPVEEWDRNFLKVDQEMLYEIILAANYLNIKPLLESGCK 122
Query: 121 TVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
VA MIK K+PEE+R+TFNI NDF+ EE +RKENEW
Sbjct: 123 MVAEMIKSKSPEELRRTFNIINDFSPEEEAAIRKENEW 160
>WB|WBGene00004810 [details] [associations]
symbol:skr-4 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:EWDADFM
EMBL:AL117207 GeneTree:ENSGT00390000012652 HSSP:P34991
RefSeq:NP_507857.1 ProteinModelPortal:Q9U1Y9 SMR:Q9U1Y9
STRING:Q9U1Y9 PaxDb:Q9U1Y9 EnsemblMetazoa:Y60A3A.18 GeneID:191762
KEGG:cel:CELE_Y60A3A.18 UCSC:Y60A3A.18 CTD:191762
WormBase:Y60A3A.18 InParanoid:Q9U1Y9 NextBio:950246 Uniprot:Q9U1Y9
Length = 159
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 73/157 (46%), Positives = 94/157 (59%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
IKL SSD + F V ++ S TI +PLP V SAIL K+I W +
Sbjct: 10 IKLISSDDKTFTVSRKVISQSKTISGFTSEDT--------IPLPKVTSAILEKIITWCEH 61
Query: 64 HXXXX-XXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 122
H +T +IS WDA+F+KVDQGTLFE+ILAANYLDI+GLL+VT + V
Sbjct: 62 HADDEPKKVEKIEKGNKKTVEISEWDAEFMKVDQGTLFEIILAANYLDIRGLLEVTTQNV 121
Query: 123 ANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWC 159
ANM+KGKTP ++R F I N F++ E E ++K N WC
Sbjct: 122 ANMMKGKTPSQVRTLFKIDN-FSEEELEAMKKGNAWC 157
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 71/155 (45%), Positives = 93/155 (60%)
Query: 197 SSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATYHXXX 256
SSD + F V ++ S TI +PLP V SAIL K+I W +H
Sbjct: 14 SSDDKTFTVSRKVISQSKTISGFTSEDT--------IPLPKVTSAILEKIITWCEHHADD 65
Query: 257 X-XXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMI 315
+T +IS WDA+F+KVDQGTLFE+ILAANYLDI+GLL+VT + VANM+
Sbjct: 66 EPKKVEKIEKGNKKTVEISEWDAEFMKVDQGTLFEIILAANYLDIRGLLEVTTQNVANMM 125
Query: 316 KGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
KGKTP ++R F I N F++ E E ++K N WCE+
Sbjct: 126 KGKTPSQVRTLFKIDN-FSEEELEAMKKGNAWCED 159
>WB|WBGene00004811 [details] [associations]
symbol:skr-5 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:Z92786 PIR:T22373 RefSeq:NP_507393.1
ProteinModelPortal:Q9XU27 SMR:Q9XU27 STRING:Q9XU27
EnsemblMetazoa:F47H4.10 GeneID:180148 KEGG:cel:CELE_F47H4.10
UCSC:F47H4.10 CTD:180148 WormBase:F47H4.10 InParanoid:Q9XU27
NextBio:908236 ArrayExpress:Q9XU27 Uniprot:Q9XU27
Length = 145
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 67/141 (47%), Positives = 85/141 (60%)
Query: 3 NIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWAT 62
++K+ +SD F V +IA S + V +PL NV S I +KVI+W
Sbjct: 7 DVKIVTSDDVEFIVSPKIANQSKLLADFVVLNQREP-----IPLKNVTSEIFKKVIEWCE 61
Query: 63 YHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 122
YH RTDDI WD +FLKVD+GTLFEL+LAA YLDIKGL +VTCK++
Sbjct: 62 YHAEDIPKPPDNVEEK-RTDDIGEWDVEFLKVDKGTLFELVLAATYLDIKGLFNVTCKSI 120
Query: 123 ANMIKGKTPEEIRKTFNIKND 143
AN IKGK+PEEIR FN+ N+
Sbjct: 121 ANSIKGKSPEEIRAVFNLGNE 141
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 58/100 (58%), Positives = 70/100 (70%)
Query: 233 VPLPNVNSAILRKVIQWATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELI 292
+PL NV S I +KVI+W YH RTDDI WD +FLKVD+GTLFEL+
Sbjct: 43 IPLKNVTSEIFKKVIEWCEYHAEDIPKPPDNVEEK-RTDDIGEWDVEFLKVDKGTLFELV 101
Query: 293 LAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKND 332
LAA YLDIKGL +VTCK++AN IKGK+PEEIR FN+ N+
Sbjct: 102 LAATYLDIKGLFNVTCKSIANSIKGKSPEEIRAVFNLGNE 141
>TAIR|locus:2080532 [details] [associations]
symbol:SK13 "AT3G60010" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
EMBL:AL138647 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 IPI:IPI00542124 PIR:T47825 RefSeq:NP_567090.1
UniGene:At.65295 ProteinModelPortal:Q9M1X5 SMR:Q9M1X5 IntAct:Q9M1X5
STRING:Q9M1X5 PaxDb:Q9M1X5 PRIDE:Q9M1X5 EnsemblPlants:AT3G60010.1
GeneID:825171 KEGG:ath:AT3G60010 TAIR:At3g60010 InParanoid:Q9M1X5
OMA:AVQSQTI PhylomeDB:Q9M1X5 ProtClustDB:CLSN2917465
Genevestigator:Q9M1X5 Uniprot:Q9M1X5
Length = 154
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 69/157 (43%), Positives = 94/157 (59%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
+ L SSDGE F V+ +A S TI M+ VP+ NV IL KVI++
Sbjct: 5 VMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANG----VPIANVTGVILSKVIEYCKK 60
Query: 64 HXXXXXXXXXXXXXXXRTDDISSWDADFLK-VDQG-TLFELILAANYLDIKGLLDVTCKT 121
H D++ WDA+F+K ++Q TLF+++LAANYL+IK LLD+ C+T
Sbjct: 61 HVVSDSPTEESK------DELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQT 114
Query: 122 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
VA+MI GK P+EIR I+NDFT EEE++RKEN+W
Sbjct: 115 VADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQW 151
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 69/164 (42%), Positives = 97/164 (59%)
Query: 189 VNSAILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQ 248
++ ++ SSDGE F V+ +A S TI M+ VP+ NV IL KVI+
Sbjct: 1 MSKMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANG----VPIANVTGVILSKVIE 56
Query: 249 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLK-VDQG-TLFELILAANYLDIKGLLDV 306
+ H D++ WDA+F+K ++Q TLF+++LAANYL+IK LLD+
Sbjct: 57 YCKKHVVSDSPTEESK------DELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDL 110
Query: 307 TCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
C+TVA+MI GK P+EIR I+NDFT EEE++RKEN+W E
Sbjct: 111 GCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154
>TAIR|locus:2093084 [details] [associations]
symbol:SK9 "AT3G21850" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0007346 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
EMBL:AB025634 GO:GO:0006511 HSSP:P63208 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 ProtClustDB:CLSN2688652
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ446683 EMBL:DQ653099 IPI:IPI00543724
RefSeq:NP_566694.1 UniGene:At.70382 ProteinModelPortal:Q9LSX9
SMR:Q9LSX9 IntAct:Q9LSX9 STRING:Q9LSX9 PaxDb:Q9LSX9 PRIDE:Q9LSX9
EnsemblPlants:AT3G21850.1 GeneID:821739 KEGG:ath:AT3G21850
TAIR:At3g21850 InParanoid:Q9LSX9 OMA:ARQCQII Genevestigator:Q9LSX9
Uniprot:Q9LSX9
Length = 153
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 65/158 (41%), Positives = 88/158 (55%)
Query: 193 ILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 252
I+ KSSDG F V+ E A+ I + +PLPNV IL VI++
Sbjct: 6 IILKSSDGHSFEVEEEAARQCQII---IAHMSENDCTDNGIPLPNVTGKILAMVIEYCNK 62
Query: 253 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 312
H DD+ WD +F++ D T+F+LI AANYL+IK L D+ C+TVA
Sbjct: 63 HHVDAANPCSD-------DDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVA 115
Query: 313 NMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
+IKG TPE+IR+ FNI+ND T EE +R+EN+W E
Sbjct: 116 EIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAFE 153
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 64/155 (41%), Positives = 87/155 (56%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
I L+SSDG F V+ E A+ I + +PLPNV IL VI++
Sbjct: 6 IILKSSDGHSFEVEEEAARQCQII---IAHMSENDCTDNGIPLPNVTGKILAMVIEYCNK 62
Query: 64 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 123
H DD+ WD +F++ D T+F+LI AANYL+IK L D+ C+TVA
Sbjct: 63 HHVDAANPCSD-------DDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVA 115
Query: 124 NMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
+IKG TPE+IR+ FNI+ND T EE +R+EN+W
Sbjct: 116 EIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKW 150
>TAIR|locus:2056966 [details] [associations]
symbol:SK19 "AT2G03160" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC005313
EMBL:DQ056525 IPI:IPI00531321 PIR:T02710 RefSeq:NP_565295.1
UniGene:At.52614 ProteinModelPortal:O81058 SMR:O81058 IntAct:O81058
STRING:O81058 PaxDb:O81058 PRIDE:O81058 EnsemblPlants:AT2G03160.1
GeneID:814845 KEGG:ath:AT2G03160 TAIR:At2g03160 InParanoid:O81058
OMA:VVETHES PhylomeDB:O81058 ProtClustDB:CLSN2917045
Genevestigator:O81058 Uniprot:O81058
Length = 200
Score = 236 (88.1 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 43/84 (51%), Positives = 62/84 (73%)
Query: 269 RTDDISSWDADFLK-VDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTF 327
+ + ++ WDA F+K D T+F++ILAANYL+++GL D+ KT+A+ IK TPEE+R+ F
Sbjct: 108 KKEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELF 167
Query: 328 NIKNDFTQAEEEQVRKENEWCEEK 351
NI+NDFT EEE +R EN W E+
Sbjct: 168 NIENDFTPEEEEAIRNENAWTFEQ 191
Score = 234 (87.4 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 42/80 (52%), Positives = 60/80 (75%)
Query: 80 RTDDISSWDADFLK-VDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTF 138
+ + ++ WDA F+K D T+F++ILAANYL+++GL D+ KT+A+ IK TPEE+R+ F
Sbjct: 108 KKEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELF 167
Query: 139 NIKNDFTQAEEEQVRKENEW 158
NI+NDFT EEE +R EN W
Sbjct: 168 NIENDFTPEEEEAIRNENAW 187
Score = 77 (32.2 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
I L SSDGE F V+ +A+ + ++ +P+PNV IL KVI++
Sbjct: 6 IVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNK----IPIPNVTGEILAKVIEYCKK 61
Query: 64 H 64
H
Sbjct: 62 H 62
Score = 76 (31.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 129 KTPEEIRKTFNIKNDFTQAEEEQVRKENEWC----------TLFELILAANYLDIKGLED 178
K P+++ + + D +AE+++ K NEW T+F++ILAANYL+++GL D
Sbjct: 88 KKPDDVAVPESTEGD-DEAEDKK-EKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFD 145
Score = 74 (31.1 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 193 ILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 252
I+ SSDGE F V+ +A+ + ++ +P+PNV IL KVI++
Sbjct: 6 IVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNK----IPIPNVTGEILAKVIEYCKK 61
Query: 253 H 253
H
Sbjct: 62 H 62
Score = 44 (20.5 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 166 LAANYLDIKG--LEDE-DEEIVPLPNVNSAILRK 196
+ A L I G +ED+ +P+PNV IL K
Sbjct: 21 VVARKLQIVGHIIEDDCATNKIPIPNVTGEILAK 54
>TAIR|locus:2056956 [details] [associations]
symbol:SK14 "AT2G03170" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC005313
EMBL:DQ056526 IPI:IPI00517714 PIR:T02709 RefSeq:NP_565296.1
UniGene:At.52615 ProteinModelPortal:O81057 SMR:O81057 IntAct:O81057
STRING:O81057 PaxDb:O81057 PRIDE:O81057 EnsemblPlants:AT2G03170.1
GeneID:814846 KEGG:ath:AT2G03170 TAIR:At2g03170 InParanoid:O81057
OMA:KTWDEEF PhylomeDB:O81057 ProtClustDB:CLSN2687939
Genevestigator:O81057 Uniprot:O81057
Length = 149
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 69/156 (44%), Positives = 93/156 (59%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
I L SSDGE F V+ +A+ ++ M+ VPL NV IL V+++
Sbjct: 6 IVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTE----VPLQNVTGKILSIVVEYCKK 61
Query: 64 HXXXXXXXXXXXXXXXRTDDISSWDADFLK-VDQGTLFELILAANYLDIKGLLDVTCKTV 122
H +D+ +WD +F+K DQ T+F+L+LAANYL+IKGLLD++ +TV
Sbjct: 62 HVVDE-----------ESDEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTV 110
Query: 123 ANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
A+ IK KTPEEIR+ FNI+NDFT EE VRKEN W
Sbjct: 111 ADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAW 146
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 69/162 (42%), Positives = 96/162 (59%)
Query: 190 NSAILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQW 249
++ I+ SSDGE F V+ +A+ ++ M+ VPL NV IL V+++
Sbjct: 3 SNKIVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTE----VPLQNVTGKILSIVVEY 58
Query: 250 ATYHXXXXXXXXXXXXXXXRTDDISSWDADFLK-VDQGTLFELILAANYLDIKGLLDVTC 308
H +D+ +WD +F+K DQ T+F+L+LAANYL+IKGLLD++
Sbjct: 59 CKKHVVDE-----------ESDEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSA 107
Query: 309 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
+TVA+ IK KTPEEIR+ FNI+NDFT EE VRKEN W E
Sbjct: 108 QTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAFE 149
>TAIR|locus:2102370 [details] [associations]
symbol:SK15 "AT3G25650" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 EMBL:AP001313 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ446700 IPI:IPI00519031 IPI:IPI00759250
RefSeq:NP_566773.1 UniGene:At.66493 ProteinModelPortal:Q1PEL7
SMR:Q1PEL7 IntAct:Q1PEL7 STRING:Q1PEL7 EnsemblPlants:AT3G25650.1
GeneID:822152 KEGG:ath:AT3G25650 TAIR:At3g25650 OMA:ENDFTHE
PhylomeDB:Q1PEL7 Genevestigator:Q1PEL7 Uniprot:Q1PEL7
Length = 177
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 68/163 (41%), Positives = 97/163 (59%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
I L SSDGE F V+ +A+ +K ++ +PL NV IL V+++
Sbjct: 6 IVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINE----IPLQNVTGNILSIVLEYCKK 61
Query: 64 HXXXXXXXXXXXX-XXXRTDD-----ISSWDADFLK-VDQGTLFELILAANYLDIKGLLD 116
H + DD + +WDA+F+K +D T+F+LILAANYL+++GLL
Sbjct: 62 HVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLG 121
Query: 117 VTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQ-VRKENEW 158
+TC+TVA+ IK KTPEE+R+ FNI+NDFT EEE+ +RKEN W
Sbjct: 122 LTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAW 164
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 68/169 (40%), Positives = 100/169 (59%)
Query: 190 NSAILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQW 249
++ I+ SSDGE F V+ +A+ +K ++ +PL NV IL V+++
Sbjct: 3 SNKIVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINE----IPLQNVTGNILSIVLEY 58
Query: 250 ATYHXXXXXXXXXXXX-XXXRTDD-----ISSWDADFLK-VDQGTLFELILAANYLDIKG 302
H + DD + +WDA+F+K +D T+F+LILAANYL+++G
Sbjct: 59 CKKHVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEG 118
Query: 303 LLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQ-VRKENEWCEE 350
LL +TC+TVA+ IK KTPEE+R+ FNI+NDFT EEE+ +RKEN W E
Sbjct: 119 LLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFE 167
>TAIR|locus:2080542 [details] [associations]
symbol:SK5 "AT3G60020" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
EMBL:AL138647 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ056631 IPI:IPI00544108 PIR:T47826
RefSeq:NP_567091.1 UniGene:At.62418 ProteinModelPortal:Q9M1X4
SMR:Q9M1X4 IntAct:Q9M1X4 STRING:Q9M1X4 PRIDE:Q9M1X4
EnsemblPlants:AT3G60020.1 GeneID:825172 KEGG:ath:AT3G60020
TAIR:At3g60020 InParanoid:Q9M1X4 OMA:EWDADFM
ProtClustDB:CLSN2917466 Genevestigator:Q9M1X4 Uniprot:Q9M1X4
Length = 153
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 66/165 (40%), Positives = 100/165 (60%)
Query: 189 VNSAILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQ 248
+++ I+ KSSDG+ F +D ++A+ S+ I MV ++PL NV S IL+ VI
Sbjct: 1 MSTKIMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATD----VIPLRNVTSKILKIVID 56
Query: 249 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGT-LFELILAANYLDIKGLLDVT 307
+ H +D+ WDADF+K + T LF++++AANYL+I+ LLD+T
Sbjct: 57 YCEKHVKSK-----------EEEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLT 105
Query: 308 CKTV-----ANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 347
CKTV A+++ GKTP+EIR FNI+ND T E ++R+EN+W
Sbjct: 106 CKTVSDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREENQW 150
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 66/161 (40%), Positives = 97/161 (60%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
I L+SSDG+ F +D ++A+ S+ I MV ++PL NV S IL+ VI +
Sbjct: 5 IMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATD----VIPLRNVTSKILKIVIDYCEK 60
Query: 64 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGT-LFELILAANYLDIKGLLDVTCKTV 122
H +D+ WDADF+K + T LF++++AANYL+I+ LLD+TCKTV
Sbjct: 61 HVKSK-----------EEEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTV 109
Query: 123 -----ANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
A+++ GKTP+EIR FNI+ND T E ++R+EN+W
Sbjct: 110 SDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREENQW 150
>FB|FBgn0031074 [details] [associations]
symbol:skpE "skpE" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0022008 EMBL:AE014298
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
OrthoDB:EOG4K6DMM EMBL:AY752578 EMBL:AY752581 RefSeq:NP_608359.1
UniGene:Dm.17269 SMR:Q9VWC3 IntAct:Q9VWC3 STRING:Q9VWC3
EnsemblMetazoa:FBtr0074806 GeneID:32997 KEGG:dme:Dmel_CG11942
UCSC:CG11942-RA CTD:32997 FlyBase:FBgn0031074 InParanoid:Q9VWC3
OMA:QNDENAI GenomeRNAi:32997 NextBio:781433 Uniprot:Q9VWC3
Length = 167
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 70/162 (43%), Positives = 91/162 (56%)
Query: 2 PNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWA 61
P IKL+SS+G IF + +A S TIKTM+ IVPL +V++ L K++ WA
Sbjct: 4 PTIKLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDENAIVPLHSVSTFTLGKILAWA 63
Query: 62 TYHXXXXXXXXXXXXXXXRTD-DISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCK 120
+H R IS WDA FL V+ TL E+ILAA L IKGLL++T
Sbjct: 64 NHHKDDDDQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYN 123
Query: 121 TVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCTLF 162
VANMI+GKTPEEIR FNI D + + + ++R W LF
Sbjct: 124 VVANMIRGKTPEEIRFIFNIPEDVSPSVDGELR----WKDLF 161
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 65/155 (41%), Positives = 86/155 (55%)
Query: 189 VNSAILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQ 248
V I +SS+G IF + +A S TIKTM+ IVPL +V++ L K++
Sbjct: 2 VTPTIKLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDENAIVPLHSVSTFTLGKILA 61
Query: 249 WATYHXXXXXXXXXXXXXXXRTD-DISSWDADFLKVDQGTLFELILAANYLDIKGLLDVT 307
WA +H R IS WDA FL V+ TL E+ILAA L IKGLL++T
Sbjct: 62 WANHHKDDDDQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELT 121
Query: 308 CKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVR 342
VANMI+GKTPEEIR FNI D + + + ++R
Sbjct: 122 YNVVANMIRGKTPEEIRFIFNIPEDVSPSVDGELR 156
>TAIR|locus:2093094 [details] [associations]
symbol:SK10 "AT3G21860" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB025634
GO:GO:0006511 GO:GO:0019005 EMBL:DQ056602 IPI:IPI00548110
RefSeq:NP_566695.1 UniGene:At.70381 HSSP:P63208
ProteinModelPortal:Q9LSX8 SMR:Q9LSX8 IntAct:Q9LSX8 STRING:Q9LSX8
EnsemblPlants:AT3G21860.1 GeneID:821740 KEGG:ath:AT3G21860
TAIR:At3g21860 eggNOG:COG5201 HOGENOM:HOG000172184
InParanoid:Q9LSX8 KO:K03094 OMA:IFDLIMA ProtClustDB:CLSN2688652
Genevestigator:Q9LSX8 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 Uniprot:Q9LSX8
Length = 152
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 66/155 (42%), Positives = 87/155 (56%)
Query: 193 ILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 252
I+ KSSDG F V+ E A TI M +PLP V IL VI++
Sbjct: 6 IILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNG----IPLPEVTGKILEMVIEYCNK 61
Query: 253 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 312
H +D+ WD +F++ Q T+F+LI+AANYL+IK LLD+ C+TVA
Sbjct: 62 HHVDAANPCSD-------EDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVA 114
Query: 313 NMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 347
+MIK T E RK FNI+ND+T EEE VR+EN+W
Sbjct: 115 DMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQW 149
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 66/155 (42%), Positives = 87/155 (56%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
I L+SSDG F V+ E A TI M +PLP V IL VI++
Sbjct: 6 IILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNG----IPLPEVTGKILEMVIEYCNK 61
Query: 64 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 123
H +D+ WD +F++ Q T+F+LI+AANYL+IK LLD+ C+TVA
Sbjct: 62 HHVDAANPCSD-------EDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVA 114
Query: 124 NMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
+MIK T E RK FNI+ND+T EEE VR+EN+W
Sbjct: 115 DMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQW 149
>UNIPROTKB|E5RGM3 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016073 Pfam:PF03931 SMART:SM00512 GO:GO:0005829
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 PANTHER:PTHR11165 HGNC:HGNC:10899 ChiTaRS:SKP1
EMBL:AC104109 EMBL:AC011336 IPI:IPI00978800
ProteinModelPortal:E5RGM3 SMR:E5RGM3 Ensembl:ENST00000520417
ArrayExpress:E5RGM3 Bgee:E5RGM3 Uniprot:E5RGM3
Length = 102
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 61/102 (59%), Positives = 67/102 (65%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQ 59
MP+IKLQSSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQ
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ 60
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFE 101
W T+H RTDDI WD +FLKVDQGTLFE
Sbjct: 61 WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFE 102
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 56/100 (56%), Positives = 63/100 (63%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRKVIQWA 250
+I +SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+KVIQW
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 251 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFE 290
T+H RTDDI WD +FLKVDQGTLFE
Sbjct: 63 THHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFE 102
>TAIR|locus:2056931 [details] [associations]
symbol:SK16 "AT2G03190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:AC005313 EMBL:BT015070 EMBL:BT015726
IPI:IPI00519862 PIR:T02707 RefSeq:NP_565297.1 UniGene:At.50066
ProteinModelPortal:O81055 SMR:O81055 IntAct:O81055 STRING:O81055
PaxDb:O81055 PRIDE:O81055 EnsemblPlants:AT2G03190.1 GeneID:814848
KEGG:ath:AT2G03190 TAIR:At2g03190 InParanoid:O81055 OMA:CADKAIP
PhylomeDB:O81055 ProtClustDB:CLSN2917046 Genevestigator:O81055
Uniprot:O81055
Length = 170
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 59/163 (36%), Positives = 88/163 (53%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
I L SSD E F V+ +A+ I M+ +PL NV IL VI++
Sbjct: 6 IVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKA----IPLENVTGNILALVIEYCKK 61
Query: 64 H-------XXXXXXXXXXXXXXXRTDDISSWDADFLK-VDQGTLFELILAANYLDIKGLL 115
H +++ +WDA+F+K D T+ +LILA NYL+++ LL
Sbjct: 62 HVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLL 121
Query: 116 DVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
+TC+TVA+ +K +PEE+R+ FNI+ND+T EE+ +RKEN W
Sbjct: 122 GLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAW 164
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 59/169 (34%), Positives = 91/169 (53%)
Query: 190 NSAILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQW 249
++ I+ SSD E F V+ +A+ I M+ +PL NV IL VI++
Sbjct: 3 SNKIVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKA----IPLENVTGNILALVIEY 58
Query: 250 ATYH-------XXXXXXXXXXXXXXXRTDDISSWDADFLK-VDQGTLFELILAANYLDIK 301
H +++ +WDA+F+K D T+ +LILA NYL+++
Sbjct: 59 CKKHVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQ 118
Query: 302 GLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
LL +TC+TVA+ +K +PEE+R+ FNI+ND+T EE+ +RKEN W E
Sbjct: 119 DLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE 167
>TAIR|locus:2093064 [details] [associations]
symbol:SK8 "AT3G21830" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB025634
GO:GO:0006511 GO:GO:0019005 HSSP:P63208 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 ProtClustDB:CLSN2688652
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ056601 IPI:IPI00519509 RefSeq:NP_566692.1
UniGene:At.62404 ProteinModelPortal:Q9LSY1 SMR:Q9LSY1 IntAct:Q9LSY1
EnsemblPlants:AT3G21830.1 GeneID:821737 KEGG:ath:AT3G21830
TAIR:At3g21830 InParanoid:Q9LSY1 OMA:HNEALNE Genevestigator:Q9LSY1
Uniprot:Q9LSY1
Length = 152
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 56/158 (35%), Positives = 88/158 (55%)
Query: 193 ILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 252
I+ KSS+G+ F ++ E A+ TI M+ ++ + + S IL VI++
Sbjct: 6 IMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDN----VILVLKMTSEILEMVIEYCNK 61
Query: 253 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 312
H DD+ WD +F++ D+ T+F L AAN+L+ K LL + +TVA
Sbjct: 62 HHVDAANPCSD-------DDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVA 114
Query: 313 NMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEE 350
+MIKG TP+++R+ FNI+ND T EE +R+EN+W E
Sbjct: 115 DMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE 152
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 55/155 (35%), Positives = 87/155 (56%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
I L+SS+G+ F ++ E A+ TI M+ ++ + + S IL VI++
Sbjct: 6 IMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDN----VILVLKMTSEILEMVIEYCNK 61
Query: 64 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 123
H DD+ WD +F++ D+ T+F L AAN+L+ K LL + +TVA
Sbjct: 62 HHVDAANPCSD-------DDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVA 114
Query: 124 NMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
+MIKG TP+++R+ FNI+ND T EE +R+EN+W
Sbjct: 115 DMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKW 149
>WB|WBGene00004813 [details] [associations]
symbol:skr-7 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0010171 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:FO081134
EMBL:AF440509 RefSeq:NP_504221.1 UniGene:Cel.190
ProteinModelPortal:G5EDY3 SMR:G5EDY3 IntAct:G5EDY3
EnsemblMetazoa:Y47D7A.1 GeneID:178840 KEGG:cel:CELE_Y47D7A.1
CTD:178840 WormBase:Y47D7A.1 OMA:QANEAPI NextBio:902772
Uniprot:G5EDY3
Length = 194
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 51/152 (33%), Positives = 78/152 (51%)
Query: 5 KLQSSDGEIFNVDFEIAKSSVTIKTMVXX-XXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
K++SSDG+++ + E K S T+ ++ +P+ NV I++ VI+W
Sbjct: 24 KVESSDGQVYEISDEAVKQSNTLSNLISTCVANDVASMDPIPITNVTGNIMKMVIEWCEK 83
Query: 64 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 123
H T + WD +FLK+D LF+LI+A+N+LD+ GL+ CK VA
Sbjct: 84 HKGETLPVEDDSVPKNIT--VPEWDTNFLKIDNDVLFDLIVASNFLDVPGLMSYACKMVA 141
Query: 124 NMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKE 155
NM GK+P+E+R F I D E+ KE
Sbjct: 142 NMAIGKSPDEMRVLFAIPTDEEDEAAEKAAKE 173
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 52/157 (33%), Positives = 79/157 (50%)
Query: 196 KSSDGEIFNVDFEIAKSSVTIKTMVXX-XXXXXXXXXIVPLPNVNSAILRKVIQWATYHX 254
+SSDG+++ + E K S T+ ++ +P+ NV I++ VI+W H
Sbjct: 26 ESSDGQVYEISDEAVKQSNTLSNLISTCVANDVASMDPIPITNVTGNIMKMVIEWCEKHK 85
Query: 255 XXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 314
T + WD +FLK+D LF+LI+A+N+LD+ GL+ CK VANM
Sbjct: 86 GETLPVEDDSVPKNIT--VPEWDTNFLKIDNDVLFDLIVASNFLDVPGLMSYACKMVANM 143
Query: 315 IKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
GK+P+E+R F I D E+ KE E+K
Sbjct: 144 AIGKSPDEMRVLFAIPTDEEDEAAEKAAKEKAEAEKK 180
>WB|WBGene00004814 [details] [associations]
symbol:skr-8 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0000003 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737
EMBL:AF440510 RefSeq:NP_503044.1 UniGene:Cel.189
ProteinModelPortal:G5ECY4 SMR:G5ECY4 EnsemblMetazoa:C52D10.9
GeneID:178495 KEGG:cel:CELE_C52D10.9 CTD:178495 WormBase:C52D10.9
OMA:NINVPEW NextBio:901360 Uniprot:G5ECY4
Length = 194
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 51/152 (33%), Positives = 78/152 (51%)
Query: 5 KLQSSDGEIFNVDFEIAKSSVTIKTMVXXXX-XXXXXXXIVPLPNVNSAILRKVIQWATY 63
K++S+DG++F + E K S + ++ +P+ NV IL+ VI+W
Sbjct: 24 KVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEK 83
Query: 64 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 123
H + ++ WD +FLK+D LF+LI+A NYLD+ GL++ CK VA
Sbjct: 84 HKGEALPVEDDSVP--KNINVPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVA 141
Query: 124 NMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKE 155
NM GK+P+E+R F I D E+ KE
Sbjct: 142 NMAIGKSPDELRIIFAIPTDEEDEAAERAAKE 173
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 52/157 (33%), Positives = 79/157 (50%)
Query: 196 KSSDGEIFNVDFEIAKSSVTIKTMVXXXX-XXXXXXXIVPLPNVNSAILRKVIQWATYHX 254
+S+DG++F + E K S + ++ +P+ NV IL+ VI+W H
Sbjct: 26 ESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEKHK 85
Query: 255 XXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 314
+ ++ WD +FLK+D LF+LI+A NYLD+ GL++ CK VANM
Sbjct: 86 GEALPVEDDSVP--KNINVPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVANM 143
Query: 315 IKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
GK+P+E+R F I D E+ KE E+K
Sbjct: 144 AIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 180
>WB|WBGene00004816 [details] [associations]
symbol:skr-10 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0002164 "larval development" evidence=IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0040032
"post-embryonic body morphogenesis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0008283 GO:GO:0000003 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0040032 EMBL:AL110479
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF440512 PIR:T26386
RefSeq:NP_502902.1 UniGene:Cel.187 ProteinModelPortal:G5EG39
SMR:G5EG39 IntAct:G5EG39 EnsemblMetazoa:Y105C5B.13 GeneID:178447
KEGG:cel:CELE_Y105C5B.13 CTD:178447 WormBase:Y105C5B.13 OMA:PARGLTI
NextBio:901170 Uniprot:G5EG39
Length = 192
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 59/173 (34%), Positives = 84/173 (48%)
Query: 182 EIVPLPNVNSAILRK--SSDGEIFNVDFEIAKSSVTIKTMVXXXX-XXXXXXXIVPLPNV 238
EI P V + I+ K S+DG +F + E K S T+ ++ +P+ NV
Sbjct: 9 EIQEAP-VAAPIMYKVESNDGTVFEISDEAVKQSNTLSNLISTCAPEDVASMDPIPITNV 67
Query: 239 NSAILRKVIQWATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYL 298
IL+ VI+W H T + WD +FLK+D LF+LI+A NYL
Sbjct: 68 TGNILKMVIEWCEKHKGEALPVDDDSVPKHIT--VPEWDTNFLKIDNEVLFDLIVACNYL 125
Query: 299 DIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
D+ GL++ CK VA M GK+P+E+R F I D E+ KE E+K
Sbjct: 126 DVPGLMNYGCKMVAMMAIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 178
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 52/152 (34%), Positives = 76/152 (50%)
Query: 5 KLQSSDGEIFNVDFEIAKSSVTIKTMVXXXX-XXXXXXXIVPLPNVNSAILRKVIQWATY 63
K++S+DG +F + E K S T+ ++ +P+ NV IL+ VI+W
Sbjct: 22 KVESNDGTVFEISDEAVKQSNTLSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEK 81
Query: 64 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 123
H T + WD +FLK+D LF+LI+A NYLD+ GL++ CK VA
Sbjct: 82 HKGEALPVDDDSVPKHIT--VPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVA 139
Query: 124 NMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKE 155
M GK+P+E+R F I D E+ KE
Sbjct: 140 MMAIGKSPDELRIIFAIPTDEEDEAAERAAKE 171
>WB|WBGene00004818 [details] [associations]
symbol:skr-12 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0045132
"meiotic chromosome segregation" evidence=IMP] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0045132 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737 EMBL:U60980
EMBL:AF440513 RefSeq:NP_503045.1 UniGene:Cel.20512
ProteinModelPortal:G5EGD5 SMR:G5EGD5 EnsemblMetazoa:C52D10.6.1
EnsemblMetazoa:C52D10.6.2 GeneID:178496 KEGG:cel:CELE_C52D10.6
CTD:178496 WormBase:C52D10.6 OMA:FDEHANN NextBio:901364
Uniprot:G5EGD5
Length = 172
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 53/153 (34%), Positives = 76/153 (49%)
Query: 5 KLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI---VPLPNVNSAILRKVIQWA 61
K+ SSDG + + + + S T+ ++ +P+ NVN + KV +W
Sbjct: 16 KIISSDGVVSKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMAKVAEWC 75
Query: 62 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 121
H T I WD FLK++ LF+LILA+N+LDIKGL+ CKT
Sbjct: 76 EKHKADAIPEDNMNVLKTLT--IPEWDQKFLKIEDEALFDLILASNFLDIKGLMYFGCKT 133
Query: 122 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRK 154
V+NM KGKT E+R+ F I D A EE ++
Sbjct: 134 VSNMAKGKTTAELREIFGINTDEQDAAEETAQR 166
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 52/150 (34%), Positives = 74/150 (49%)
Query: 197 SSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI---VPLPNVNSAILRKVIQWATYH 253
SSDG + + + + S T+ ++ +P+ NVN + KV +W H
Sbjct: 19 SSDGVVSKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMAKVAEWCEKH 78
Query: 254 XXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 313
T I WD FLK++ LF+LILA+N+LDIKGL+ CKTV+N
Sbjct: 79 KADAIPEDNMNVLKTLT--IPEWDQKFLKIEDEALFDLILASNFLDIKGLMYFGCKTVSN 136
Query: 314 MIKGKTPEEIRKTFNIKNDFTQAEEEQVRK 343
M KGKT E+R+ F I D A EE ++
Sbjct: 137 MAKGKTTAELREIFGINTDEQDAAEETAQR 166
>WB|WBGene00004815 [details] [associations]
symbol:skr-9 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0000003 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737
EMBL:AF440511 RefSeq:NP_503043.1 UniGene:Cel.188
ProteinModelPortal:G5EFA9 SMR:G5EFA9 IntAct:G5EFA9
EnsemblMetazoa:C52D10.7 GeneID:178494 KEGG:cel:CELE_C52D10.7
CTD:178494 WormBase:C52D10.7 OMA:KIVAMMA NextBio:901356
Uniprot:G5EFA9
Length = 194
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 50/152 (32%), Positives = 77/152 (50%)
Query: 5 KLQSSDGEIFNVDFEIAKSSVTIKTMVXXXX-XXXXXXXIVPLPNVNSAILRKVIQWATY 63
K++S+DG++F + E K S + ++ +P+ NV IL+ VI+W
Sbjct: 24 KVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVIGNILKMVIEWCEK 83
Query: 64 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 123
H + ++ WD +FLK+D LF+LI+A NYLD+ GL++ CK VA
Sbjct: 84 HKGEALPVEDDSVP--KHVNVPEWDTNFLKIDNDVLFDLIVACNYLDVPGLMNYGCKIVA 141
Query: 124 NMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKE 155
M GK+P+E+R F I D E+ KE
Sbjct: 142 MMAIGKSPDELRIIFAIPTDEEDEAAERAAKE 173
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 51/157 (32%), Positives = 78/157 (49%)
Query: 196 KSSDGEIFNVDFEIAKSSVTIKTMVXXXX-XXXXXXXIVPLPNVNSAILRKVIQWATYHX 254
+S+DG++F + E K S + ++ +P+ NV IL+ VI+W H
Sbjct: 26 ESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVIGNILKMVIEWCEKHK 85
Query: 255 XXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 314
+ ++ WD +FLK+D LF+LI+A NYLD+ GL++ CK VA M
Sbjct: 86 GEALPVEDDSVP--KHVNVPEWDTNFLKIDNDVLFDLIVACNYLDVPGLMNYGCKIVAMM 143
Query: 315 IKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCEEK 351
GK+P+E+R F I D E+ KE E+K
Sbjct: 144 AIGKSPDELRIIFAIPTDEEDEAAERAAKEKAEAEKK 180
>WB|WBGene00004820 [details] [associations]
symbol:skr-14 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:FO081134 RefSeq:NP_504220.3
ProteinModelPortal:Q9N3U9 SMR:Q9N3U9 STRING:Q9N3U9
EnsemblMetazoa:Y47D7A.8 GeneID:178839 KEGG:cel:CELE_Y47D7A.8
UCSC:Y47D7A.8 CTD:178839 WormBase:Y47D7A.8 InParanoid:Q9N3U9
OMA:RRERCKC NextBio:902768 ArrayExpress:Q9N3U9 Uniprot:Q9N3U9
Length = 197
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 51/148 (34%), Positives = 73/148 (49%)
Query: 5 KLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI---VPLPNVNSAILRKVIQWA 61
K+ S+DG + + + + S T+ ++ +P+ NVN + KV +W
Sbjct: 45 KIISNDGVVTKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMEKVAEWC 104
Query: 62 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 121
H T I WD FLK++ LF+LILA+N+LDIKGL+ CKT
Sbjct: 105 EKHNADAIPEDNMNVLKTLT--IPEWDQKFLKIEDEALFDLILASNFLDIKGLMYYGCKT 162
Query: 122 VANMIKGKTPEEIRKTFNIKNDFTQAEE 149
V+NM KGKT E+R+ F I D A E
Sbjct: 163 VSNMAKGKTTAELREIFGINTDEQDAAE 190
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 50/145 (34%), Positives = 71/145 (48%)
Query: 197 SSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI---VPLPNVNSAILRKVIQWATYH 253
S+DG + + + + S T+ ++ +P+ NVN + KV +W H
Sbjct: 48 SNDGVVTKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMEKVAEWCEKH 107
Query: 254 XXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 313
T I WD FLK++ LF+LILA+N+LDIKGL+ CKTV+N
Sbjct: 108 NADAIPEDNMNVLKTLT--IPEWDQKFLKIEDEALFDLILASNFLDIKGLMYYGCKTVSN 165
Query: 314 MIKGKTPEEIRKTFNIKNDFTQAEE 338
M KGKT E+R+ F I D A E
Sbjct: 166 MAKGKTTAELREIFGINTDEQDAAE 190
>WB|WBGene00004819 [details] [associations]
symbol:skr-13 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0045132
"meiotic chromosome segregation" evidence=IMP] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0045132 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737
EMBL:AF440514 RefSeq:NP_503042.1 UniGene:Cel.18172
ProteinModelPortal:G5EEX4 SMR:G5EEX4 EnsemblMetazoa:C52D10.8
GeneID:178493 KEGG:cel:CELE_C52D10.8 CTD:178493 WormBase:C52D10.8
OMA:KEEDTHA NextBio:901352 Uniprot:G5EEX4
Length = 172
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 53/153 (34%), Positives = 75/153 (49%)
Query: 5 KLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI---VPLPNVNSAILRKVIQWA 61
K+ SSDG + + + + S T+ ++ +P+ NVN + KV +
Sbjct: 16 KIISSDGVVSKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMAKVAELC 75
Query: 62 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKT 121
H T I WD FLK++ LF+LILA+N+LDIKGL+ CKT
Sbjct: 76 EKHKADAIPEDNMNVLKTLT--IPEWDQKFLKIEDEALFDLILASNFLDIKGLMYYGCKT 133
Query: 122 VANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRK 154
V+NM KGKT E+R+ F I D A EE +K
Sbjct: 134 VSNMAKGKTTAELREIFGINTDEQDAAEETAQK 166
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 52/150 (34%), Positives = 73/150 (48%)
Query: 197 SSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI---VPLPNVNSAILRKVIQWATYH 253
SSDG + + + + S T+ ++ +P+ NVN + KV + H
Sbjct: 19 SSDGVVSKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMAKVAELCEKH 78
Query: 254 XXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 313
T I WD FLK++ LF+LILA+N+LDIKGL+ CKTV+N
Sbjct: 79 KADAIPEDNMNVLKTLT--IPEWDQKFLKIEDEALFDLILASNFLDIKGLMYYGCKTVSN 136
Query: 314 MIKGKTPEEIRKTFNIKNDFTQAEEEQVRK 343
M KGKT E+R+ F I D A EE +K
Sbjct: 137 MAKGKTTAELREIFGINTDEQDAAEETAQK 166
>TAIR|locus:2061709 [details] [associations]
symbol:MEO "AT2G20160" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC006081
IPI:IPI00536504 PIR:G84585 RefSeq:NP_565467.1 UniGene:At.66224
ProteinModelPortal:Q9SL65 SMR:Q9SL65 IntAct:Q9SL65 STRING:Q9SL65
EnsemblPlants:AT2G20160.1 GeneID:816536 KEGG:ath:AT2G20160
TAIR:At2g20160 InParanoid:Q9SL65 OMA:LAIIIEY PhylomeDB:Q9SL65
Genevestigator:Q9SL65 Uniprot:Q9SL65
Length = 150
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 53/156 (33%), Positives = 83/156 (53%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
I L SSD E F +D +A+ + M+ + L NV IL +I++
Sbjct: 6 IVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKA----IRLQNVTGKILAIIIEYCKK 61
Query: 64 HXXXXXXXXXXXXXXXRTDDISSWDADFLK-VDQGTLFELILAANYLDIKGLLDVTCKTV 122
H ++ +WDA+F+K +D TLF+L+ AA+YL + GL ++ + +
Sbjct: 62 HVDDVEAK----------NEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAI 111
Query: 123 ANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
A+ KT EIR+ FNI+ND+T EEE++RK+NEW
Sbjct: 112 ADYTADKTVNEIRELFNIENDYTPEEEEELRKKNEW 147
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 52/156 (33%), Positives = 83/156 (53%)
Query: 193 ILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 252
I+ SSD E F +D +A+ + M+ + L NV IL +I++
Sbjct: 6 IVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKA----IRLQNVTGKILAIIIEYCKK 61
Query: 253 HXXXXXXXXXXXXXXXRTDDISSWDADFLK-VDQGTLFELILAANYLDIKGLLDVTCKTV 311
H ++ +WDA+F+K +D TLF+L+ AA+YL + GL ++ + +
Sbjct: 62 HVDDVEAK----------NEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAI 111
Query: 312 ANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 347
A+ KT EIR+ FNI+ND+T EEE++RK+NEW
Sbjct: 112 ADYTADKTVNEIRELFNIENDYTPEEEEELRKKNEW 147
>WB|WBGene00004812 [details] [associations]
symbol:skr-6 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 Gene3D:3.30.710.10
InterPro:IPR011333 GO:GO:0006511 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 PANTHER:PTHR11165 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 EMBL:AL023837 RefSeq:NP_507574.2
UniGene:Cel.36626 ProteinModelPortal:Q9U2N1 SMR:Q9U2N1
STRING:Q9U2N1 EnsemblMetazoa:Y37H2C.2 GeneID:191763
KEGG:cel:CELE_Y37H2C.2 UCSC:Y37H2C.2 CTD:191763 WormBase:Y37H2C.2
InParanoid:Q9U2N1 OMA:DHIMAAN NextBio:950250 Uniprot:Q9U2N1
Length = 106
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 44/115 (38%), Positives = 67/115 (58%)
Query: 44 VPLPNVNSAILRKVIQWATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELI 103
+PL V++ I K+I++ + +I WD++FLK+DQ TLF+L+
Sbjct: 4 IPLTKVDAKIFEKIIEYCEHQGTPRPLL---------NGEIGEWDSEFLKLDQNTLFDLV 54
Query: 104 LAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 158
LAANYL+I+ L DVT + +ANM+K TP +IR F + N + AE+ R +N W
Sbjct: 55 LAANYLNIENLFDVTTQFIANMMKNNTPSQIRARFGVSNKHSSAED---RSDN-W 105
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 44/115 (38%), Positives = 67/115 (58%)
Query: 233 VPLPNVNSAILRKVIQWATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELI 292
+PL V++ I K+I++ + +I WD++FLK+DQ TLF+L+
Sbjct: 4 IPLTKVDAKIFEKIIEYCEHQGTPRPLL---------NGEIGEWDSEFLKLDQNTLFDLV 54
Query: 293 LAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEW 347
LAANYL+I+ L DVT + +ANM+K TP +IR F + N + AE+ R +N W
Sbjct: 55 LAANYLNIENLFDVTTQFIANMMKNNTPSQIRARFGVSNKHSSAED---RSDN-W 105
>WB|WBGene00004826 [details] [associations]
symbol:skr-20 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:Z50755 EMBL:AF440519 PIR:T24207 RefSeq:NP_510192.1
UniGene:Cel.183 SMR:G5EE98 IntAct:G5EE98 EnsemblMetazoa:R12H7.5
GeneID:181445 KEGG:cel:CELE_R12H7.5 CTD:181445 WormBase:R12H7.5
OMA:FINQKFI NextBio:913974 Uniprot:G5EE98
Length = 173
Score = 191 (72.3 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 50/150 (33%), Positives = 75/150 (50%)
Query: 2 PNIKLQSSDGEIFNVDFEIAKSSVTI-KTMVXXXXXXXXXXXIVP-LPNVNSAILRKVIQ 59
P KL+S DG+IFNV+ K I + + P L +S+I++ VI+
Sbjct: 8 PLYKLKSEDGQIFNVERGPMKFCAFINQKFIDHGVNDRNCERADPILVPFHSSIVQAVIE 67
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W YH R D S WD F V+ G LF L+ A++ L ++ L+++ C
Sbjct: 68 WL-YHYQDNPLARRDSKI--RYHDFSEWDKQFFNVESGVLFALLNASHALGVEDLMNMGC 124
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEE 149
A +I+GK+ EEIRK + I++D Q EE
Sbjct: 125 AAAAELIRGKSTEEIRKIYGIRSDEEQMEE 154
Score = 183 (69.5 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 48/145 (33%), Positives = 72/145 (49%)
Query: 196 KSSDGEIFNVDFEIAKSSVTI-KTMVXXXXXXXXXXXIVP-LPNVNSAILRKVIQWATYH 253
KS DG+IFNV+ K I + + P L +S+I++ VI+W YH
Sbjct: 13 KSEDGQIFNVERGPMKFCAFINQKFIDHGVNDRNCERADPILVPFHSSIVQAVIEWL-YH 71
Query: 254 XXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 313
R D S WD F V+ G LF L+ A++ L ++ L+++ C A
Sbjct: 72 YQDNPLARRDSKI--RYHDFSEWDKQFFNVESGVLFALLNASHALGVEDLMNMGCAAAAE 129
Query: 314 MIKGKTPEEIRKTFNIKNDFTQAEE 338
+I+GK+ EEIRK + I++D Q EE
Sbjct: 130 LIRGKSTEEIRKIYGIRSDEEQMEE 154
>UNIPROTKB|G5EE98 [details] [associations]
symbol:skr-20 "Protein SKR-20" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:Z50755 EMBL:AF440519 PIR:T24207 RefSeq:NP_510192.1
UniGene:Cel.183 SMR:G5EE98 IntAct:G5EE98 EnsemblMetazoa:R12H7.5
GeneID:181445 KEGG:cel:CELE_R12H7.5 CTD:181445 WormBase:R12H7.5
OMA:FINQKFI NextBio:913974 Uniprot:G5EE98
Length = 173
Score = 191 (72.3 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 50/150 (33%), Positives = 75/150 (50%)
Query: 2 PNIKLQSSDGEIFNVDFEIAKSSVTI-KTMVXXXXXXXXXXXIVP-LPNVNSAILRKVIQ 59
P KL+S DG+IFNV+ K I + + P L +S+I++ VI+
Sbjct: 8 PLYKLKSEDGQIFNVERGPMKFCAFINQKFIDHGVNDRNCERADPILVPFHSSIVQAVIE 67
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W YH R D S WD F V+ G LF L+ A++ L ++ L+++ C
Sbjct: 68 WL-YHYQDNPLARRDSKI--RYHDFSEWDKQFFNVESGVLFALLNASHALGVEDLMNMGC 124
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEE 149
A +I+GK+ EEIRK + I++D Q EE
Sbjct: 125 AAAAELIRGKSTEEIRKIYGIRSDEEQMEE 154
Score = 183 (69.5 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 48/145 (33%), Positives = 72/145 (49%)
Query: 196 KSSDGEIFNVDFEIAKSSVTI-KTMVXXXXXXXXXXXIVP-LPNVNSAILRKVIQWATYH 253
KS DG+IFNV+ K I + + P L +S+I++ VI+W YH
Sbjct: 13 KSEDGQIFNVERGPMKFCAFINQKFIDHGVNDRNCERADPILVPFHSSIVQAVIEWL-YH 71
Query: 254 XXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 313
R D S WD F V+ G LF L+ A++ L ++ L+++ C A
Sbjct: 72 YQDNPLARRDSKI--RYHDFSEWDKQFFNVESGVLFALLNASHALGVEDLMNMGCAAAAE 129
Query: 314 MIKGKTPEEIRKTFNIKNDFTQAEE 338
+I+GK+ EEIRK + I++D Q EE
Sbjct: 130 LIRGKSTEEIRKIYGIRSDEEQMEE 154
>WB|WBGene00004823 [details] [associations]
symbol:skr-17 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0040018 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0040035 GO:GO:0006511 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:FO080131 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:AF440517 PIR:T15426 RefSeq:NP_495638.1
UniGene:Cel.18244 ProteinModelPortal:G5EGN7 SMR:G5EGN7
EnsemblMetazoa:C06A8.4 GeneID:174257 KEGG:cel:CELE_C06A8.4
CTD:174257 WormBase:C06A8.4 OMA:CKTVANS NextBio:883257
Uniprot:G5EGN7
Length = 180
Score = 177 (67.4 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 48/147 (32%), Positives = 69/147 (46%)
Query: 4 IKLQSSDGEIFNVDFE-IAKSSVTIKTMVXXXXXXXXXXXIVPLP--NVNSAILRKVIQW 60
++L SSDG + D + SS T+ + P+P NV L+ +I+W
Sbjct: 25 LQLTSSDGHLLQGDIRALLLSSTLAATIRELGYDKEYCAELKPVPVNNVVGFTLKLLIEW 84
Query: 61 ATYHXXXXXXXXXXXXXXXRTDDISSWDADFL-KVDQGTLFELILAANYLDIKGLLDVTC 119
H + I SWD FL ++ LF+LI AA +LD+ GL++ C
Sbjct: 85 CDKHKEDDPAIALAEKDK-KNICIPSWDRHFLSRLPMSNLFDLITAAYHLDVTGLINYGC 143
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQ 146
KTVAN KGK EE+R+ F I + Q
Sbjct: 144 KTVANSAKGKNAEEMRELFGIPEPWEQ 170
Score = 171 (65.3 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 47/143 (32%), Positives = 66/143 (46%)
Query: 197 SSDGEIFNVDFE-IAKSSVTIKTMVXXXXXXXXXXXIVPLP--NVNSAILRKVIQWATYH 253
SSDG + D + SS T+ + P+P NV L+ +I+W H
Sbjct: 29 SSDGHLLQGDIRALLLSSTLAATIRELGYDKEYCAELKPVPVNNVVGFTLKLLIEWCDKH 88
Query: 254 XXXXXXXXXXXXXXXRTDDISSWDADFL-KVDQGTLFELILAANYLDIKGLLDVTCKTVA 312
+ I SWD FL ++ LF+LI AA +LD+ GL++ CKTVA
Sbjct: 89 KEDDPAIALAEKDK-KNICIPSWDRHFLSRLPMSNLFDLITAAYHLDVTGLINYGCKTVA 147
Query: 313 NMIKGKTPEEIRKTFNIKNDFTQ 335
N KGK EE+R+ F I + Q
Sbjct: 148 NSAKGKNAEEMRELFGIPEPWEQ 170
>WB|WBGene00004822 [details] [associations]
symbol:skr-16 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
eggNOG:COG5201 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
EMBL:FO080771 PIR:T34158 RefSeq:NP_501128.2
ProteinModelPortal:Q18567 SMR:Q18567 STRING:Q18567 PaxDb:Q18567
EnsemblMetazoa:C42D4.6 GeneID:191765 KEGG:cel:CELE_C42D4.6
UCSC:C42D4.6 CTD:191765 WormBase:C42D4.6 HOGENOM:HOG000018058
InParanoid:Q18567 OMA:NMAKGKN NextBio:950258 Uniprot:Q18567
Length = 181
Score = 166 (63.5 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 45/150 (30%), Positives = 68/150 (45%)
Query: 189 VNSAILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQ 248
++S + SSDGE F D + S K ++ + + V L +V++
Sbjct: 28 LDSIFILISSDGEKFQTDGHCIRHS---KVLMQASKSLETPDTPIQVEKVQGDTLNRVLE 84
Query: 249 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLK-VDQGTLFELILAANYLDIKGLLDVT 307
W H + WD +LK +D L +LI A+N L ++ L+D
Sbjct: 85 WCNNHRDDGKYVSQCGPSLR----LPQWDFRWLKDLDNQELVDLINASNDLQMQQLMDYA 140
Query: 308 CKTVANMIKGKTPEEIRKTFNIKNDFTQAE 337
CKTVANM KGK P ++R+ F I D +AE
Sbjct: 141 CKTVANMAKGKNPAQLRELFGILTDEEEAE 170
Score = 165 (63.1 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 45/144 (31%), Positives = 65/144 (45%)
Query: 6 LQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATYHX 65
L SSDGE F D + S K ++ + + V L +V++W H
Sbjct: 34 LISSDGEKFQTDGHCIRHS---KVLMQASKSLETPDTPIQVEKVQGDTLNRVLEWCNNHR 90
Query: 66 XXXXXXXXXXXXXXRTDDISSWDADFLK-VDQGTLFELILAANYLDIKGLLDVTCKTVAN 124
+ WD +LK +D L +LI A+N L ++ L+D CKTVAN
Sbjct: 91 DDGKYVSQCGPSLR----LPQWDFRWLKDLDNQELVDLINASNDLQMQQLMDYACKTVAN 146
Query: 125 MIKGKTPEEIRKTFNIKNDFTQAE 148
M KGK P ++R+ F I D +AE
Sbjct: 147 MAKGKNPAQLRELFGILTDEEEAE 170
>WB|WBGene00004821 [details] [associations]
symbol:skr-15 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0040010 GO:GO:0006974 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF440516
EMBL:FO080579 PIR:T33615 RefSeq:NP_494662.1 UniGene:Cel.185
ProteinModelPortal:G5EE88 SMR:G5EE88 EnsemblMetazoa:F54D10.1
GeneID:173729 KEGG:cel:CELE_F54D10.1 CTD:173729 WormBase:F54D10.1
OMA:YSIESND NextBio:880833 Uniprot:G5EE88
Length = 184
Score = 166 (63.5 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 39/153 (25%), Positives = 69/153 (45%)
Query: 6 LQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXX-XIVPLP--NVNSAILRKVIQWAT 62
++S+D + + + K S T+ + +VP+P VN L+ V++W
Sbjct: 23 IESNDRVVLKISEQAIKQSATLSNSITNLGYSAENAESMVPIPIEKVNGKTLKLVVEWCE 82
Query: 63 YHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 122
+H + WD F+ ++ L +L+ A+N+L++ LL CK +
Sbjct: 83 HHKADPVPEAYPSGNTV----LPVWDRKFVDIEHDALTDLVNASNFLEVMTLLTYCCKFI 138
Query: 123 ANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKE 155
A + KG +PEE+R F I D + E+ KE
Sbjct: 139 AGLAKGMSPEEMRVFFCIPTDEEDEKAERFGKE 171
Score = 163 (62.4 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 39/152 (25%), Positives = 68/152 (44%)
Query: 196 KSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXX-XIVPLP--NVNSAILRKVIQWATY 252
+S+D + + + K S T+ + +VP+P VN L+ V++W +
Sbjct: 24 ESNDRVVLKISEQAIKQSATLSNSITNLGYSAENAESMVPIPIEKVNGKTLKLVVEWCEH 83
Query: 253 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 312
H + WD F+ ++ L +L+ A+N+L++ LL CK +A
Sbjct: 84 HKADPVPEAYPSGNTV----LPVWDRKFVDIEHDALTDLVNASNFLEVMTLLTYCCKFIA 139
Query: 313 NMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKE 344
+ KG +PEE+R F I D + E+ KE
Sbjct: 140 GLAKGMSPEEMRVFFCIPTDEEDEKAERFGKE 171
>TAIR|locus:2093074 [details] [associations]
symbol:SK7 "AT3G21840" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB025634
GO:GO:0006511 GO:GO:0019005 HSSP:P63208 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:BX841469 IPI:IPI00538513
RefSeq:NP_566693.1 UniGene:At.70383 ProteinModelPortal:Q9LSY0
SMR:Q9LSY0 IntAct:Q9LSY0 STRING:Q9LSY0 EnsemblPlants:AT3G21840.1
GeneID:821738 KEGG:ath:AT3G21840 TAIR:At3g21840 InParanoid:Q9LSY0
OMA:LMIIACK Genevestigator:Q9LSY0 Uniprot:Q9LSY0
Length = 125
Score = 161 (61.7 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 41/123 (33%), Positives = 64/123 (52%)
Query: 193 ILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 252
I+ KSSDG++F ++ E A+ TI M+ ++P+ NV S IL VI++
Sbjct: 6 IMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDN----VIPVSNVTSEILEMVIEYCNK 61
Query: 253 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 312
H +D+ WD +F++ DQ T+F L+ AA L IK LL + +TVA
Sbjct: 62 HHVDAANPCSD-------EDLKKWDKEFMEKDQYTIFHLMNAAYDLHIKSLLALAYQTVA 114
Query: 313 NMI 315
+M+
Sbjct: 115 DMV 117
Score = 160 (61.4 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 41/123 (33%), Positives = 64/123 (52%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
I L+SSDG++F ++ E A+ TI M+ ++P+ NV S IL VI++
Sbjct: 6 IMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDN----VIPVSNVTSEILEMVIEYCNK 61
Query: 64 HXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 123
H +D+ WD +F++ DQ T+F L+ AA L IK LL + +TVA
Sbjct: 62 HHVDAANPCSD-------EDLKKWDKEFMEKDQYTIFHLMNAAYDLHIKSLLALAYQTVA 114
Query: 124 NMI 126
+M+
Sbjct: 115 DMV 117
>UNIPROTKB|E5RI56 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016073 Pfam:PF03931 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 PANTHER:PTHR11165
HGNC:HGNC:10899 ChiTaRS:SKP1 EMBL:AC104109 EMBL:AC011336
IPI:IPI00973884 ProteinModelPortal:E5RI56 SMR:E5RI56
Ensembl:ENST00000519718 ArrayExpress:E5RI56 Bgee:E5RI56
Uniprot:E5RI56
Length = 91
Score = 161 (61.7 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 37/57 (64%), Positives = 41/57 (71%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRK 56
MP+IKLQSSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+K
Sbjct: 35 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKK 91
Score = 132 (51.5 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 32/55 (58%), Positives = 37/55 (67%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXI-VPLPNVNSAILRK 245
+I +SSDGEIF VD EIAK SVTIKTM+ VPLPNVN+AIL+K
Sbjct: 37 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKK 91
>WB|WBGene00018935 [details] [associations]
symbol:skr-18 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0002009 GO:GO:0006898 GO:GO:0040010 GO:GO:0040011
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:FO081484 RefSeq:NP_741300.1 UniGene:Cel.25436
ProteinModelPortal:Q8WSN2 SMR:Q8WSN2 STRING:Q8WSN2
EnsemblMetazoa:F56B3.12 GeneID:260116 KEGG:cel:CELE_F56B3.12
CTD:260116 WormBase:F56B3.12 InParanoid:Q8WSN2 NextBio:952880
Uniprot:Q8WSN2
Length = 183
Score = 147 (56.8 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 43/140 (30%), Positives = 64/140 (45%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXX-XXIVPLP-NVNSAILRKVIQWA 61
++L SS+GE+ D + S TI T + I P+P + + L +I+W
Sbjct: 29 LQLASSNGEVLQADIRALQLSSTISTTIKELGYDKEDCAEIKPIPVDEHEYTLDLLIKWC 88
Query: 62 TYHXXXXXXXXXXXXXXXRTDDISSWDADFLKV-DQGTLFELILAANYLDIKGLLDVTCK 120
H + I SWD F V G L +I AA LDI GL++ +
Sbjct: 89 DQHKGDDPEIAKAEKGKKKVV-IPSWDQHFFSVLPMGNLLAVIKAAYDLDITGLVNYGTQ 147
Query: 121 TVANMIKGKTPEEIRKTFNI 140
TVA+ I GK+ EE+R+ F +
Sbjct: 148 TVASRINGKSAEEMREIFQL 167
Score = 142 (55.0 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 44/147 (29%), Positives = 66/147 (44%)
Query: 187 PNVNSAILR-KSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXX-XXIVPLP-NVNSAIL 243
P+ +L+ SS+GE+ D + S TI T + I P+P + + L
Sbjct: 22 PSAPPRLLQLASSNGEVLQADIRALQLSSTISTTIKELGYDKEDCAEIKPIPVDEHEYTL 81
Query: 244 RKVIQWATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKV-DQGTLFELILAANYLDIKG 302
+I+W H + I SWD F V G L +I AA LDI G
Sbjct: 82 DLLIKWCDQHKGDDPEIAKAEKGKKKVV-IPSWDQHFFSVLPMGNLLAVIKAAYDLDITG 140
Query: 303 LLDVTCKTVANMIKGKTPEEIRKTFNI 329
L++ +TVA+ I GK+ EE+R+ F +
Sbjct: 141 LVNYGTQTVASRINGKSAEEMREIFQL 167
>TAIR|locus:505006407 [details] [associations]
symbol:SK21 "AT3G61415" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132962
GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0019005 HSSP:P63208 eggNOG:COG5201
PANTHER:PTHR11165 SUPFAM:SSF81382 HOGENOM:HOG000034103
ProtClustDB:CLSN2689298 EMBL:AY084971 IPI:IPI00527962
IPI:IPI00892309 RefSeq:NP_001118876.1 RefSeq:NP_567113.1
UniGene:At.34286 ProteinModelPortal:Q8LF97 SMR:Q8LF97
EnsemblPlants:AT3G61415.1 GeneID:825314 KEGG:ath:AT3G61415
TAIR:At3g61415 InParanoid:Q8LF97 OMA:MEDDIFT PhylomeDB:Q8LF97
Genevestigator:Q8LF97 Uniprot:Q8LF97
Length = 351
Score = 160 (61.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 44/147 (29%), Positives = 73/147 (49%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPN-VNSAILRKVIQWAT 62
I L+++DG I V+ E+A I V + LP VN A+L + +
Sbjct: 18 IWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIFDYCR 77
Query: 63 YHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 122
+H + +D F+++D L EL AA+ L +K L+D+T + +
Sbjct: 78 FHQVPGRS----------NKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 127
Query: 123 ANMIKGKTPEEIRKTFNIKNDFTQAEE 149
A +I+GKTPEEIR+ F++ +D T+ E+
Sbjct: 128 ARIIEGKTPEEIREIFHLPDDLTEEEK 154
Score = 159 (61.0 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 47/162 (29%), Positives = 78/162 (48%)
Query: 179 EDEEIVPLPNV-NSAILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPN 237
E E + P + S I +++DG I V+ E+A I V + LP
Sbjct: 3 EGEMAIIKPEMMKSYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQ 62
Query: 238 -VNSAILRKVIQWATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAAN 296
VN A+L + + +H + +D F+++D L EL AA+
Sbjct: 63 RVNPAMLSLIFDYCRFHQVPGRS----------NKERKVYDEKFIRMDTKRLCELTSAAD 112
Query: 297 YLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEE 338
L +K L+D+T + +A +I+GKTPEEIR+ F++ +D T+ E+
Sbjct: 113 SLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEK 154
>WB|WBGene00004827 [details] [associations]
symbol:skr-21 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 PANTHER:PTHR11165 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z70210 PIR:T23515
RefSeq:NP_510194.1 ProteinModelPortal:Q21367 SMR:Q21367
IntAct:Q21367 STRING:Q21367 EnsemblMetazoa:K08H2.1 GeneID:181447
KEGG:cel:CELE_K08H2.1 UCSC:K08H2.1 CTD:181447 WormBase:K08H2.1
eggNOG:KOG1724 HOGENOM:HOG000017727 InParanoid:Q21367 OMA:MKDSAQP
NextBio:913982 ArrayExpress:Q21367 Uniprot:Q21367
Length = 176
Score = 141 (54.7 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 52/193 (26%), Positives = 90/193 (46%)
Query: 2 PNIKLQSSDGEIFNV-DFEIAKSSVTIKTMVXXXXXXXXXXXIVPLP-NVNSAILRKVIQ 59
P K+QS DG++F V D+ I KS K PL ++ S +L K+I+
Sbjct: 8 PVFKIQSCDGQVFAVEDWFIQKS----KCFSVVLAQMNNLVQPHPLKTSICSFVLVKIIE 63
Query: 60 WATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
W +H +++WD F++ + L L AA L+I GLLDV C
Sbjct: 64 WCYHHRNEDQDHAQRI--------LTAWDVQFIRTNSAILLHLAEAAFRLEIVGLLDVAC 115
Query: 120 KTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKENEWCTLFELILAANYLDIKGLEDE 179
+ V+ M+ G+T E++ + + ++EE ++ + EL +D+ E++
Sbjct: 116 RAVSIML-GRTLNEVKLMLRVGGVESPSDEEDSLED-----VLEL-----EVDVDENEED 164
Query: 180 DEEIVPLPNVNSA 192
D EI +P +++A
Sbjct: 165 DVEI-EIPAISAA 176
Score = 121 (47.7 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 40/146 (27%), Positives = 67/146 (45%)
Query: 196 KSSDGEIFNV-DFEIAKSSVTIKTMVXXXXXXXXXXXIVPLP-NVNSAILRKVIQWATYH 253
+S DG++F V D+ I KS K PL ++ S +L K+I+W +H
Sbjct: 13 QSCDGQVFAVEDWFIQKS----KCFSVVLAQMNNLVQPHPLKTSICSFVLVKIIEWCYHH 68
Query: 254 XXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 313
+++WD F++ + L L AA L+I GLLDV C+ V+
Sbjct: 69 RNEDQDHAQRI--------LTAWDVQFIRTNSAILLHLAEAAFRLEIVGLLDVACRAVSI 120
Query: 314 MIKGKTPEEIRKTFNIKNDFTQAEEE 339
M+ G+T E++ + + ++EE
Sbjct: 121 ML-GRTLNEVKLMLRVGGVESPSDEE 145
>TAIR|locus:2050709 [details] [associations]
symbol:SK20 "AT2G45950" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5201 PANTHER:PTHR11165 SUPFAM:SSF81382
EMBL:AC004665 EMBL:AF370493 EMBL:AY081697 IPI:IPI00524579
IPI:IPI00846808 IPI:IPI00877396 PIR:T02452 RefSeq:NP_001078065.1
RefSeq:NP_566058.2 UniGene:At.12716 UniGene:At.49380
ProteinModelPortal:A8MQG7 SMR:A8MQG7 IntAct:A8MQG7
EnsemblPlants:AT2G45950.2 GeneID:819203 KEGG:ath:AT2G45950
TAIR:At2g45950 HOGENOM:HOG000034103 InParanoid:A8MQG7 OMA:DEIDPAM
PhylomeDB:A8MQG7 ProtClustDB:CLSN2689298 Genevestigator:A8MQG7
Uniprot:A8MQG7
Length = 352
Score = 159 (61.0 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 44/154 (28%), Positives = 76/154 (49%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPN-VNSAILRKVIQWAT 62
I LQ++DG I V+ E+A I V + LP VN A+ ++ +
Sbjct: 18 IWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILDYCR 77
Query: 63 YHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 122
+H + ++D F+++D L EL AA+ L +K L+D+T + +
Sbjct: 78 FHQLPGRS----------NKERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 127
Query: 123 ANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKEN 156
A +I+GK PEEIR+ F++ +D T+ E+ + K +
Sbjct: 128 ARIIEGKNPEEIREIFHLPDDLTEEEKLEPLKNS 161
Score = 156 (60.0 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 176 LEDEDEEIVPLPNVNSAILRKSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPL 235
+ + D ++ + S I +++DG I V+ E+A I V + L
Sbjct: 1 MSEGDLAVMKPETMKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISL 60
Query: 236 PN-VNSAILRKVIQWATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILA 294
P VN A+ ++ + +H + ++D F+++D L EL A
Sbjct: 61 PQRVNPAMFSLILDYCRFHQLPGRS----------NKERKTYDERFIRMDTKRLCELTSA 110
Query: 295 ANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQVRKEN 345
A+ L +K L+D+T + +A +I+GK PEEIR+ F++ +D T+ E+ + K +
Sbjct: 111 ADSLQLKPLVDLTSRALARIIEGKNPEEIREIFHLPDDLTEEEKLEPLKNS 161
>FB|FBgn0034904 [details] [associations]
symbol:CG15800 species:7227 "Drosophila melanogaster"
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072 Pfam:PF01466
EMBL:AE013599 GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0004842 KO:K03094
PANTHER:PTHR11165 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
RefSeq:NP_611828.1 UniGene:Dm.33986 ProteinModelPortal:Q9W1J7
SMR:Q9W1J7 IntAct:Q9W1J7 MINT:MINT-4080370 STRING:Q9W1J7
PRIDE:Q9W1J7 EnsemblMetazoa:FBtr0072245 GeneID:37763
KEGG:dme:Dmel_CG15800 UCSC:CG15800-RA FlyBase:FBgn0034904
InParanoid:Q9W1J7 OMA:DWDKEFL OrthoDB:EOG415DWP PhylomeDB:Q9W1J7
GenomeRNAi:37763 NextBio:805295 Bgee:Q9W1J7 Uniprot:Q9W1J7
Length = 157
Score = 136 (52.9 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 37/157 (23%), Positives = 70/157 (44%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATY 63
++ ++ DG +V+ + + S+ I+ M ++PL ++S +L K++ WA Y
Sbjct: 2 VRFETRDGRTISVNLALLEKSLVIREMCRVGQVPEDEDFVLPLHGIHSNVLLKILLWAEY 61
Query: 64 HXXXXXXXXXXXXXXXRTDDI----SSWDADFLKVDQGTLFELILAANYLDIKGLLDVTC 119
H ++I S WD +FL+V+ ++ +++ NYLDI L + C
Sbjct: 62 HEKHEEPAWVDSKDPLPAEEIELQISDWDKEFLRVEIDSICKIMEGCNYLDIPWLYKL-C 120
Query: 120 KTVANMIKGKTPEEIRKTFNIKND-FTQAEEEQVRKE 155
+ + PE + K F EQ++KE
Sbjct: 121 AQKLVFLSSREPETQFSGYVEKIPRFQDHFIEQIQKE 157
Score = 130 (50.8 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 37/154 (24%), Positives = 68/154 (44%)
Query: 196 KSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXXXXXIVPLPNVNSAILRKVIQWATYHXX 255
++ DG +V+ + + S+ I+ M ++PL ++S +L K++ WA YH
Sbjct: 5 ETRDGRTISVNLALLEKSLVIREMCRVGQVPEDEDFVLPLHGIHSNVLLKILLWAEYHEK 64
Query: 256 XXXXXXXXXXXXXRTDDI----SSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 311
++I S WD +FL+V+ ++ +++ NYLDI L + C
Sbjct: 65 HEEPAWVDSKDPLPAEEIELQISDWDKEFLRVEIDSICKIMEGCNYLDIPWLYKL-CAQK 123
Query: 312 ANMIKGKTPEEIRKTFNIKND-FTQAEEEQVRKE 344
+ + PE + K F EQ++KE
Sbjct: 124 LVFLSSREPETQFSGYVEKIPRFQDHFIEQIQKE 157
>TAIR|locus:2085201 [details] [associations]
symbol:SK6 "AT3G53060" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=TAS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5201 KO:K03094 PANTHER:PTHR11165
SUPFAM:SSF81382 EMBL:AL132969 EMBL:DQ446762 EMBL:DQ653150
IPI:IPI00533585 PIR:T47563 RefSeq:NP_566978.1 UniGene:At.53910
ProteinModelPortal:Q1PEF6 SMR:Q1PEF6 STRING:Q1PEF6
EnsemblPlants:AT3G53060.1 GeneID:824472 KEGG:ath:AT3G53060
TAIR:At3g53060 InParanoid:Q1PEF6 Genevestigator:Q1PEF6
Uniprot:Q1PEF6
Length = 85
Score = 135 (52.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 44 VPLPNVNSAILRKVIQWATYHXXXXXXXXXXXXXXXRTDDISSWDADFLK-VDQGTLFEL 102
+PLPNV S IL VI++ H + +D+ WDA+F+K ++Q LF++
Sbjct: 16 IPLPNVTSKILLLVIEYCKKHVVES-----------KEEDLKKWDAEFMKKMEQSILFDV 64
Query: 103 ILAANYLDIKGLLDVT 118
++AANYL+I+ LLD+T
Sbjct: 65 MMAANYLNIQSLLDLT 80
Score = 135 (52.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 233 VPLPNVNSAILRKVIQWATYHXXXXXXXXXXXXXXXRTDDISSWDADFLK-VDQGTLFEL 291
+PLPNV S IL VI++ H + +D+ WDA+F+K ++Q LF++
Sbjct: 16 IPLPNVTSKILLLVIEYCKKHVVES-----------KEEDLKKWDAEFMKKMEQSILFDV 64
Query: 292 ILAANYLDIKGLLDVT 307
++AANYL+I+ LLD+T
Sbjct: 65 MMAANYLNIQSLLDLT 80
>WB|WBGene00004825 [details] [associations]
symbol:skr-19 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:Z50755 EMBL:AF440518 RefSeq:NP_510193.4 UniGene:Cel.184
ProteinModelPortal:G5EC92 SMR:G5EC92 EnsemblMetazoa:R12H7.3
GeneID:181446 KEGG:cel:CELE_R12H7.3 CTD:181446 WormBase:R12H7.3
OMA:RKVIEWC Uniprot:G5EC92
Length = 155
Score = 126 (49.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 43/149 (28%), Positives = 64/149 (42%)
Query: 5 KLQSSDGEIFNVDFEIAKSSVTIKTMVXXXXXXXX-XXXIVPLP-NVNSAILRKVIQWAT 62
KL+S+DG+ F D I+ + + P+ + + ++RKVI+W
Sbjct: 11 KLRSTDGQRFLADRRTIGMIGRIEDLFRNAGLDLIPADQLQPIQLEIPATVMRKVIEWCD 70
Query: 63 YHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 122
+H T+DI WDA FL V LF++I AA + GL + C+ V
Sbjct: 71 HHKHDPPYDESEP----ETNDIPDWDASFLMVRHNMLFDIIRAARDFTVPGLFAMCCRVV 126
Query: 123 ANMIKGKTPEEIRKTFNIKNDFTQAEEEQ 151
G+ P EI + ND EEEQ
Sbjct: 127 -----GQNPREIID--GLVND---EEEEQ 145
Score = 119 (46.9 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 34/103 (33%), Positives = 48/103 (46%)
Query: 238 VNSAILRKVIQWATYHXXXXXXXXXXXXXXXRTDDISSWDADFLKVDQGTLFELILAANY 297
+ + ++RKVI+W +H T+DI WDA FL V LF++I AA
Sbjct: 57 IPATVMRKVIEWCDHHKHDPPYDESEP----ETNDIPDWDASFLMVRHNMLFDIIRAARD 112
Query: 298 LDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTQAEEEQ 340
+ GL + C+ V G+ P EI + ND EEEQ
Sbjct: 113 FTVPGLFAMCCRVV-----GQNPREIID--GLVND---EEEEQ 145
>UNIPROTKB|E5RGM4 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016073 Pfam:PF03931 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 PANTHER:PTHR11165
HGNC:HGNC:10899 ChiTaRS:SKP1 EMBL:AC104109 EMBL:AC011336
IPI:IPI00974248 ProteinModelPortal:E5RGM4 SMR:E5RGM4
Ensembl:ENST00000523966 ArrayExpress:E5RGM4 Bgee:E5RGM4
Uniprot:E5RGM4
Length = 41
Score = 126 (49.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 26/31 (83%), Positives = 28/31 (90%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMV 31
MP+IKLQSSDGEIF VD EIAK SVTIKTM+
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTML 31
Score = 97 (39.2 bits), Expect = 0.00019, P = 0.00019
Identities = 21/29 (72%), Positives = 24/29 (82%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMV 220
+I +SSDGEIF VD EIAK SVTIKTM+
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTML 31
>UNIPROTKB|E5RHM3 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016073 Pfam:PF03931 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 PANTHER:PTHR11165
HGNC:HGNC:10899 ChiTaRS:SKP1 EMBL:AC104109 EMBL:AC011336
IPI:IPI00973720 ProteinModelPortal:E5RHM3 SMR:E5RHM3
Ensembl:ENST00000519054 ArrayExpress:E5RHM3 Bgee:E5RHM3
Uniprot:E5RHM3
Length = 39
Score = 126 (49.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 26/31 (83%), Positives = 28/31 (90%)
Query: 1 MPNIKLQSSDGEIFNVDFEIAKSSVTIKTMV 31
MP+IKLQSSDGEIF VD EIAK SVTIKTM+
Sbjct: 1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTML 31
Score = 97 (39.2 bits), Expect = 0.00019, P = 0.00019
Identities = 21/29 (72%), Positives = 24/29 (82%)
Query: 192 AILRKSSDGEIFNVDFEIAKSSVTIKTMV 220
+I +SSDGEIF VD EIAK SVTIKTM+
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTML 31
>TAIR|locus:2168454 [details] [associations]
symbol:AT5G59140 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=RCA]
[GO:0009062 "fatty acid catabolic process" evidence=RCA]
InterPro:IPR016073 Pfam:PF03931 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0003746 GO:GO:0006511 EMBL:AB016890
eggNOG:NOG298860 HOGENOM:HOG000216525 KO:K03872 OMA:PGQFSEN
HSSP:Q03071 EMBL:AY045995 EMBL:AY096614 IPI:IPI00536842
RefSeq:NP_568900.1 UniGene:At.6930 ProteinModelPortal:Q9FIG0
SMR:Q9FIG0 IntAct:Q9FIG0 STRING:Q9FIG0 PaxDb:Q9FIG0 PRIDE:Q9FIG0
EnsemblPlants:AT5G59140.1 GeneID:836032 KEGG:ath:AT5G59140
TAIR:At5g59140 InParanoid:Q9FIG0 PhylomeDB:Q9FIG0
ProtClustDB:CLSN2690048 ArrayExpress:Q9FIG0 Genevestigator:Q9FIG0
Uniprot:Q9FIG0
Length = 96
Score = 73 (30.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 4 IKLQSSDGEIFNVDFEIAKSSVTIKTMVXX-XXXXXXXXXIVPLPNVNSAILRKVIQW 60
+KL S +G F +D E A S TI++M+ +V P++++ IL K+ Q+
Sbjct: 5 VKLISMEGFEFVIDREAAMVSQTIRSMLTSPGGFSESKDGVVTFPDISTTILEKICQY 62
Score = 47 (21.6 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 132 EEIRKTFNIKNDFTQAEEEQVRKENEWCTLFELILAANYL 171
E+I + F +++ +E + E E TL EL++AANYL
Sbjct: 57 EKICQYFYWSLQYSRGKETEFHIEPE-LTL-ELMMAANYL 94
Score = 37 (18.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 7/9 (77%), Positives = 9/9 (100%)
Query: 101 ELILAANYL 109
EL++AANYL
Sbjct: 86 ELMMAANYL 94
Score = 37 (18.1 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 7/9 (77%), Positives = 9/9 (100%)
Query: 290 ELILAANYL 298
EL++AANYL
Sbjct: 86 ELMMAANYL 94
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 351 299 0.00095 115 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 78
No. of states in DFA: 594 (63 KB)
Total size of DFA: 190 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 22.08u 0.08s 22.16t Elapsed: 00:00:20
Total cpu time: 22.09u 0.09s 22.18t Elapsed: 00:00:21
Start: Thu Aug 15 12:55:13 2013 End: Thu Aug 15 12:55:34 2013