BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4650
(381 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O62621|COPB2_DROME Coatomer subunit beta' OS=Drosophila melanogaster GN=beta'Cop PE=2
SV=2
Length = 914
Score = 292 bits (748), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 128/154 (83%), Positives = 144/154 (93%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH QNISAVCFHP
Sbjct: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHP 239
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
ELPIV+TGSEDG+VR+WHSGT+RLE L YG ERVWTISS++G+NNVA+GYDEGS+++KV
Sbjct: 240 ELPIVLTGSEDGTVRIWHSGTYRLETCLNYGFERVWTISSMRGTNNVALGYDEGSIIIKV 299
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPE 226
GREEPA+SMDV G KIIWA+HSE+QQ NLKT+ +
Sbjct: 300 GREEPAMSMDVVGSKIIWAKHSEMQQVNLKTIAD 333
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 36/59 (61%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWH 150
K ++++G+DD +++++Y V + E H + + HP P+V+T S+D +++W+
Sbjct: 69 KNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWN 127
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 92 KPYLISGADDRLVKIWDYQNK-TCVQTLEGHGQNISAVCFHP-ELPIVITGSEDGSVRVW 149
+P +++ +DD L+K+W+++ C + EGH + + F+P + + S D +V+VW
Sbjct: 111 QPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVW 170
Query: 150 HSGTHRLEISL 160
G++ +L
Sbjct: 171 QLGSNFANFTL 181
Score = 31.6 bits (70), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 70 ILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVC 129
I + L V CVD + +P+++ + V I +Y+N+ V+ E + +
Sbjct: 7 IKRRLTSRSDRVKCVDLHPA--EPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPVRSAR 64
Query: 130 FHPELPIVITGSEDGSVRVWHSGT 153
F ++TGS+D +RV++ T
Sbjct: 65 FVARKNWILTGSDDMQIRVFNYNT 88
>sp|P35605|COPB2_BOVIN Coatomer subunit beta' OS=Bos taurus GN=COPB2 PE=1 SV=3
Length = 906
Score = 278 bits (711), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 126/169 (74%), Positives = 146/169 (86%), Gaps = 3/169 (1%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL GHEKGVNC+DYY GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH QN+S FHP
Sbjct: 180 TLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP 239
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
ELPI+ITGSEDG+VR+WHS T+RLE +L YG+ERVW ++SL+GSNNVA+GYDEGS+++K+
Sbjct: 240 ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKL 299
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV 241
GREEPA+SMD NG KIIWA+HSEVQQANLK M + I G L L+V
Sbjct: 300 GREEPAMSMDANG-KIIWAKHSEVQQANLKAMGDA--EIKDGERLPLAV 345
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
K ++++GADD +++++Y V E H I + HP P ++T S+D +++W
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 35/62 (56%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ + V +W+++ +T V+T E + A F V+TG++D +RV++
Sbjct: 27 EPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNY 86
Query: 152 GT 153
T
Sbjct: 87 NT 88
>sp|O55029|COPB2_MOUSE Coatomer subunit beta' OS=Mus musculus GN=Copb2 PE=2 SV=2
Length = 905
Score = 278 bits (711), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 126/169 (74%), Positives = 146/169 (86%), Gaps = 3/169 (1%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL GHEKGVNC+DYY GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH QN+S FHP
Sbjct: 180 TLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP 239
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
ELPI+ITGSEDG+VR+WHS T+RLE +L YG+ERVW ++SL+GSNNVA+GYDEGS+++K+
Sbjct: 240 ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKL 299
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV 241
GREEPA+SMD NG KIIWA+HSEVQQANLK M + I G L L+V
Sbjct: 300 GREEPAMSMDANG-KIIWAKHSEVQQANLKAMGDT--EIKDGERLPLAV 345
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
K ++++GADD +++++Y V E H I + HP P ++T S+D +++W
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 35/62 (56%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ + V +W+++ +T V+T E + A F V+TG++D +RV++
Sbjct: 27 EPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNY 86
Query: 152 GT 153
T
Sbjct: 87 NT 88
>sp|Q5R664|COPB2_PONAB Coatomer subunit beta' OS=Pongo abelii GN=COPB2 PE=2 SV=1
Length = 906
Score = 278 bits (710), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 126/169 (74%), Positives = 146/169 (86%), Gaps = 3/169 (1%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL GHEKGVNC+DYY GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH QN+S FHP
Sbjct: 180 TLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP 239
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
ELPI+ITGSEDG+VR+WHS T+RLE +L YG+ERVW ++SL+GSNNVA+GYDEGS+++K+
Sbjct: 240 ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKL 299
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV 241
GREEPA+SMD NG KIIWA+HSEVQQANLK M + I G L L+V
Sbjct: 300 GREEPAMSMDANG-KIIWAKHSEVQQANLKAMGDA--EIKDGERLPLAV 345
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
K ++++GADD +++++Y V E H I + HP P ++T S+D +++W
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 35/62 (56%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ + V +W+++ +T V+T E + A F V+TG++D +RV++
Sbjct: 27 EPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNY 86
Query: 152 GT 153
T
Sbjct: 87 NT 88
>sp|P35606|COPB2_HUMAN Coatomer subunit beta' OS=Homo sapiens GN=COPB2 PE=1 SV=2
Length = 906
Score = 278 bits (710), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 126/169 (74%), Positives = 146/169 (86%), Gaps = 3/169 (1%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL GHEKGVNC+DYY GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH QN+S FHP
Sbjct: 180 TLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP 239
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
ELPI+ITGSEDG+VR+WHS T+RLE +L YG+ERVW ++SL+GSNNVA+GYDEGS+++K+
Sbjct: 240 ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKL 299
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV 241
GREEPA+SMD NG KIIWA+HSEVQQANLK M + I G L L+V
Sbjct: 300 GREEPAMSMDANG-KIIWAKHSEVQQANLKAMGDA--EIKDGERLPLAV 345
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
K ++++GADD +++++Y V E H I + HP P ++T S+D +++W
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 35/62 (56%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ + V +W+++ +T V+T E + A F V+TG++D +RV++
Sbjct: 27 EPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNY 86
Query: 152 GT 153
T
Sbjct: 87 NT 88
>sp|O35142|COPB2_RAT Coatomer subunit beta' OS=Rattus norvegicus GN=Copb2 PE=1 SV=3
Length = 905
Score = 275 bits (704), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 125/169 (73%), Positives = 145/169 (85%), Gaps = 3/169 (1%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL GHEKGVNC+DYY GGDKPYLISGADDRLVKIWDYQNKTCVQT EGH QN+S FHP
Sbjct: 180 TLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHP 239
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
ELPI+ITGSEDG+VR+WHS T+RLE +L YG+ERVW ++SL+GSNNVA+GYDEGS+++K+
Sbjct: 240 ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKL 299
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV 241
GREEPA+SMD NG KIIWA+HSEVQQANLK M + I G L L+V
Sbjct: 300 GREEPAMSMDANG-KIIWAKHSEVQQANLKAMGDT--EIKDGERLPLAV 345
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
K ++++GADD +++++Y V E H I + HP P ++T S+D +++W
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 35/62 (56%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ + V +W+++ +T V+T E + A F V+TG++D +RV++
Sbjct: 27 EPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNY 86
Query: 152 GT 153
T
Sbjct: 87 NT 88
>sp|Q4R4I8|COPB2_MACFA Coatomer subunit beta' OS=Macaca fascicularis GN=COPB2 PE=2 SV=1
Length = 906
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 125/169 (73%), Positives = 144/169 (85%), Gaps = 3/169 (1%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL GHEKGVNC+DYY GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH QN+S FHP
Sbjct: 180 TLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP 239
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
ELPI+ITGSEDG+VR+WHS T+RLE +L YG+ERVW ++SL+GSNNVA+G DEGS+++K+
Sbjct: 240 ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGCDEGSIIVKL 299
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV 241
GREEPA+SMD NG KIIWA+HSEVQQANLK M I G L L+V
Sbjct: 300 GREEPAMSMDANG-KIIWAKHSEVQQANLKAMGNA--EIKDGERLPLAV 345
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
K ++++GADD +++++Y V E H I + HP P ++T S+D +++W
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLW 126
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 35/62 (56%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ + V +W+++ +T V+T E + A F V+TG++D +RV++
Sbjct: 27 EPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNY 86
Query: 152 GT 153
T
Sbjct: 87 NT 88
>sp|Q20168|COPB2_CAEEL Probable coatomer subunit beta' OS=Caenorhabditis elegans
GN=F38E11.5 PE=3 SV=3
Length = 1000
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 125/170 (73%), Positives = 146/170 (85%), Gaps = 2/170 (1%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL GHEKGVNCVDYYHGG+KPY+ISGADD LVKIWDYQNKTCVQTL+GH QN+S+VCFHP
Sbjct: 180 TLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHP 239
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
ELP++ITGSED +VR+WH+ T+RLE +L YGLERVW I + KG+N +AIGYDEGSV LK+
Sbjct: 240 ELPLIITGSEDSTVRLWHANTYRLETTLNYGLERVWCIQAQKGANTIAIGYDEGSVTLKL 299
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMP-EVFENITAGVVLTLSV 241
GREEPAVSMD +G KI+WA+HSE+QQANLKT+ E E I G L LSV
Sbjct: 300 GREEPAVSMDSSG-KILWAKHSEIQQANLKTISTEESEAIQDGERLPLSV 348
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 93 PYLISGADDRLVKIWDYQNKTCV-QTLEGHGQNISAVCFHP-ELPIVITGSEDGSVRVWH 150
PY+IS +DD LVK+WD+ NK + Q+ EGH + + +P + T S D +V+VW
Sbjct: 112 PYVISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQ 171
Query: 151 SGTH 154
G++
Sbjct: 172 FGSN 175
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
K ++++G+DD +++++Y V E H + ++ HP LP VI+ S+D V++W
Sbjct: 69 KSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDDMLVKMW 126
Score = 39.7 bits (91), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 70 ILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVC 129
+ + L V CVD + + +L++ + V IW+Y+ +T V++ E + A
Sbjct: 7 VKRKLLARSDRVKCVDLHPV--ETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAK 64
Query: 130 FHPELPIVITGSEDGSVRVWHSGT----HRLEISLTY 162
F P V+TGS+D +RV++ T H+ E Y
Sbjct: 65 FVPRKSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDY 101
>sp|Q5VQ78|COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica
GN=Os06g0143900 PE=2 SV=1
Length = 907
Score = 244 bits (623), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 109/169 (64%), Positives = 137/169 (81%), Gaps = 2/169 (1%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL GH+KGVNCVDY+ GGD+PYLI+G+DD K+WDYQ K+CVQTLEGH NISAVCFHP
Sbjct: 180 TLDGHQKGVNCVDYFTGGDRPYLITGSDDSTAKVWDYQTKSCVQTLEGHTHNISAVCFHP 239
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
ELPI+ITGSEDG+VR+WHS T+RLE +L YGLERVW + +KGS + IGYDEG++++K+
Sbjct: 240 ELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRMVIGYDEGTIMIKM 299
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV 241
GRE P SMD +G KIIWA+H+E+Q N+KT+ FE +T G L L+V
Sbjct: 300 GREVPVASMDTSG-KIIWAKHNEIQTVNIKTVGAGFE-VTDGERLPLAV 346
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 23/102 (22%)
Query: 52 YQESSRVKAFN----PIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 107
YQ + VK+F P++ A I + K ++++GADD ++++
Sbjct: 44 YQSQTMVKSFEVSELPVRSAKFISR-------------------KQWVVAGADDMFIRVY 84
Query: 108 DYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
+Y V+ E H I V HP LP V++ S+D +++W
Sbjct: 85 NYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Score = 35.4 bits (80), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P+++S V IWDYQ++T V++ E + + F V+ G++D +RV++
Sbjct: 27 EPWILSSLYSGSVCIWDYQSQTMVKSFEVSELPVRSAKFISRKQWVVAGADDMFIRVYNY 86
Query: 152 GT 153
T
Sbjct: 87 NT 88
>sp|Q9C827|COB22_ARATH Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2
SV=1
Length = 926
Score = 238 bits (608), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 108/169 (63%), Positives = 135/169 (79%), Gaps = 2/169 (1%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL H+KGVNCVDY+ GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH N+SAVCFHP
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP 239
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
ELPI+ITGSEDG+VR+WH+ T+RLE +L YGLERVW I +K S V IGYDEG++++K+
Sbjct: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKL 299
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV 241
GRE P SMD G KIIWA+H+E+Q AN+K++ +E +T G L LSV
Sbjct: 300 GREIPVASMDNTG-KIIWAKHNEIQTANIKSIGADYE-VTDGERLPLSV 346
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 23/117 (19%)
Query: 53 QESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHG--------------------GDK 92
Q S RVK+ + IL +LY G C+ Y K
Sbjct: 13 QRSERVKSVDLHPTEPWILASLYS---GTLCIWNYQTQVMAKSFEVTELPVRSAKFVARK 69
Query: 93 PYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++++GADD +++++Y V+ E H I V HP LP V++ S+D +++W
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
>sp|Q6H8D6|COB23_ORYSJ Putative coatomer subunit beta'-3 OS=Oryza sativa subsp. japonica
GN=Os02g0209000 PE=3 SV=2
Length = 910
Score = 237 bits (604), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 128/152 (84%), Gaps = 1/152 (0%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL GH KGVNCVDY+ GGD+PYLI+G+DD+ K+WDYQ K+CVQTLEGH N+SAVCFHP
Sbjct: 180 TLDGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHP 239
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
ELPI++TGSEDG+VR+WHS T+RLE +L YGLERVW + +KGS V IGYDEG++++K+
Sbjct: 240 ELPIILTGSEDGTVRLWHSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKI 299
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTM 224
GRE P SMD +G KIIW++H+E+Q N+KT+
Sbjct: 300 GREVPVASMDSSG-KIIWSKHNEIQTVNIKTI 330
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
K ++++GADD +++++Y V+ E H I V HP P V++ S+D +++W
Sbjct: 69 KQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLIKLW 126
Score = 32.0 bits (71), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P+++S V IW+YQ +T V++ E + + F V+ G++D +RV++
Sbjct: 27 EPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSSKFITRKQWVVAGADDMFIRVYNY 86
Query: 152 GT 153
T
Sbjct: 87 NT 88
>sp|Q8L828|COB23_ARATH Coatomer subunit beta'-3 OS=Arabidopsis thaliana GN=At3g15980 PE=2
SV=1
Length = 909
Score = 236 bits (602), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 135/169 (79%), Gaps = 2/169 (1%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL H+KGVNCVDY+ GGDKPYLI+G+DD K+WDYQ K+CVQTL+GH N+SAVCFHP
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP 239
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
ELPI+ITGSEDG+VR+WH+ T+RLE +L YGLERVW I +K S V IGYDEG++++K+
Sbjct: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKL 299
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV 241
GRE P SMD +G KIIWA+H+E+Q AN+K++ +E T G L LSV
Sbjct: 300 GREIPVASMDSSG-KIIWAKHNEIQTANIKSIGAGYE-ATDGERLPLSV 346
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 23/117 (19%)
Query: 53 QESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHG--------------------GDK 92
Q S RVK+ + IL +LY G C+ Y K
Sbjct: 13 QRSERVKSVDLHPTEPWILASLYS---GTVCIWNYQTQTITKSFEVTELPVRSAKFIPRK 69
Query: 93 PYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++++GADD +++++Y V+ E H I V HP LP V++ S+D +++W
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ V IW+YQ +T ++ E + + F P V+ G++D +RV++
Sbjct: 27 EPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNY 86
Query: 152 GT 153
T
Sbjct: 87 NT 88
>sp|Q6H8D5|COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica
GN=Os02g0209100 PE=2 SV=1
Length = 910
Score = 236 bits (602), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 134/169 (79%), Gaps = 2/169 (1%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL GH KGVNCVDY+ GGD+PYLI+G+DD+ K+WDYQ K+CVQTLEGH N+SAVCFHP
Sbjct: 180 TLDGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHP 239
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
ELPI +TGSEDG+VR+WHS T+RLE +L YGLERVW + +KGS V IGYDEG++++K+
Sbjct: 240 ELPITLTGSEDGTVRLWHSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKI 299
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV 241
GRE P SMD +G KIIW++H+E+Q N+KT+ E I G L L+V
Sbjct: 300 GREVPVASMDSSG-KIIWSKHNEIQTVNIKTIGADNE-IADGERLPLAV 346
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 23/117 (19%)
Query: 53 QESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHG--------------------GDK 92
Q S RVK+ + IL +LY G C+ Y K
Sbjct: 13 QRSERVKSVDLHPTEPWILSSLYS---GSVCIWNYQTQTMVKSFEVTELPVRSSKFIARK 69
Query: 93 PYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++++GADD +++++Y V+ E H I V HP P V++ S+D +++W
Sbjct: 70 QWIVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLIKLW 126
>sp|Q9CAA0|COB21_ARATH Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2
SV=2
Length = 920
Score = 228 bits (582), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 132/169 (78%), Gaps = 3/169 (1%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL H KGVNCVDY+ GGDKPYLI+G+DD K+WDYQ K+CVQTLEGH N+SAV FHP
Sbjct: 180 TLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHP 239
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
ELPI+ITGSEDG+VR+WH+ T+RLE +L YGLERVW I +KGS V IGYDEGS+++K+
Sbjct: 240 ELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMVKL 299
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV 241
GRE P SMD +G KIIWA+H+E+ N+K++ + +T G L L+V
Sbjct: 300 GREIPVASMDNSG-KIIWAKHNEIHTVNIKSVGA--DEVTDGERLPLAV 345
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 23/103 (22%)
Query: 51 SYQESSRVKAFN----PIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 106
+YQ + VK+F+ P++ A I + K ++++GADD +++
Sbjct: 43 NYQTQTMVKSFDVTELPVRSAKFIAR-------------------KQWVVAGADDMFIRV 83
Query: 107 WDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++Y ++ E H I V HP LP V++ S+D +++W
Sbjct: 84 YNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLW 126
>sp|Q54YD8|COPB2_DICDI Coatomer subunit beta' OS=Dictyostelium discoideum GN=copb2 PE=3
SV=1
Length = 1005
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 95/167 (56%), Positives = 137/167 (82%), Gaps = 3/167 (1%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL GHEKG+N V+Y+ GG+KPYLISGADD+LVKIWDYQ+KTCVQTLEGH N+S VC+HP
Sbjct: 181 TLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHP 240
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
ELP++++GSEDG+V++WHS T+RLE +L YG+ VW+++ L+GSN + +GYD+G+V+LK+
Sbjct: 241 ELPLILSGSEDGTVKLWHSSTYRLERTLNYGMGFVWSMNFLRGSNFIGLGYDDGTVVLKI 300
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTL 239
G+ +P VSMD G K+I+A+H+E++ +N+ + E + + G L+L
Sbjct: 301 GKNKPPVSMD-QGGKVIYAKHNEIRISNISSTLE--QEVQDGEKLSL 344
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 24/107 (22%)
Query: 48 YKISYQESSRVKAF-----NPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDR 102
Y +Y+ + VK+F NP++ A I K K ++++G+DD
Sbjct: 40 YIWNYETQNMVKSFEVSPNNPVRTARFIAK-------------------KQWIVTGSDDT 80
Query: 103 LVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
+++++Y +++ E H I + HP LP +++ S+D +++W
Sbjct: 81 YIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLW 127
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 57 RVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK-TCV 115
RV +N ++ +K+ H + C+ + PY++S +DD +K+WDY+ +
Sbjct: 83 RVYNYNTMEK----IKSFEAHADYIRCIIVH--PTLPYILSSSDDMFIKLWDYEKGWSNT 136
Query: 116 QTLEGHGQNISAVCFHP-ELPIVITGSEDGSVRVW 149
Q EGH + ++ ++P + T S D +V+VW
Sbjct: 137 QVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVW 171
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQN-ISAVCFHPELPIVITGSEDGSVRVWH 150
+P++++ D V IW+Y+ + V++ E N + F + ++TGS+D +RV++
Sbjct: 27 EPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAKKQWIVTGSDDTYIRVYN 86
Query: 151 SGT 153
T
Sbjct: 87 YNT 89
>sp|O42937|COPB2_SCHPO Probable coatomer subunit beta' OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec27 PE=3 SV=2
Length = 796
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 117/169 (69%), Gaps = 2/169 (1%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
TL H++GVN V+YY GDKPYLI+ DD L+K+WDYQ K CV+ LEGH N+S FH
Sbjct: 179 TLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFAFFHS 238
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
+ PI+I+GSEDG+V++WH+ ++ L S + L+R W I+ K + V +G+D G + +
Sbjct: 239 KFPIIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCIAQNKDNGLVTVGFDNGLITFSL 298
Query: 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV 241
GR+EP+V+MD +G K++W+ ++EV A ++ E ++T G +++LSV
Sbjct: 299 GRDEPSVTMDSSG-KVVWSNYNEVMSAMIRPAKEQ-SDLTDGSLISLSV 345
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWH 150
K + + G+DD V++++Y V E H I A+ HP P ++T S+D +++ ++
Sbjct: 68 KNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFN 126
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+ L H + V VD++ +P++I+ + V IW+Y +T V++ + + I A F
Sbjct: 8 RKLLSHTERVKAVDFHPT--EPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFI 65
Query: 132 PELPIVITGSEDGSVRVWHSGT 153
+ GS+D VRV++ T
Sbjct: 66 ARKNWFVCGSDDFQVRVYNYNT 87
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 108 DYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRL 156
D+Q K L H + + AV FHP P VI +G V +W+ T L
Sbjct: 5 DFQRK-----LLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTL 48
>sp|P41811|COPB2_YEAST Coatomer subunit beta' OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC27 PE=1 SV=1
Length = 889
Score = 155 bits (392), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 99/138 (71%), Gaps = 3/138 (2%)
Query: 76 GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELP 135
G E+GVN VDYY DKPY+I+ +DD +KIWDYQ K+CV TLEGH N+S FHP LP
Sbjct: 182 GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241
Query: 136 IVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISS--LKGSNNVAIGYDEGSVLLKVG 193
I+I+GSEDG++++W+S T+++E +L GLER W I++ N +A G+D G +L +G
Sbjct: 242 IIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301
Query: 194 REEPAVSMDVNGCKIIWA 211
+EP +S+D G K++W+
Sbjct: 302 NDEPTLSLDPVG-KLVWS 318
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCV-QTLEGHGQNISAVCFHPELP-IVITGSEDGSVRVW 149
KPY++SG+DD VK+W+++N + QT EGH + V F+P+ P +G D +V+VW
Sbjct: 109 KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168
Query: 150 HSGTHRLEISLTYGLER 166
G +LT G ER
Sbjct: 169 SLGQSTPNFTLTTGQER 185
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWH 150
K ++I G+DD +++++Y V E H I ++ HP P V++GS+D +V++W+
Sbjct: 67 KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWN 125
>sp|Q9AUR7|COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica
GN=Os03g0711500 PE=2 SV=1
Length = 1218
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 90/166 (54%), Gaps = 10/166 (6%)
Query: 66 VATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHGQ 123
V ++ L GH++GVN ++ P ++SGADDR VKIW + V TL GH
Sbjct: 192 VDAVVKYVLEGHDRGVNWASFHP--TLPLIVSGADDRQVKIWRMNDTKAWEVDTLRGHMN 249
Query: 124 NISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLE--RVWTISSLKGSNNVAI 181
N+S V FH + I+++ SED S+R+W + T R I T+ E R W +S+ N +A
Sbjct: 250 NVSCVMFHAKQDIIVSNSEDKSIRIWDA-TKRTGIQ-TFRREHDRFWILSAHPEMNLLAA 307
Query: 182 GYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEV 227
G+D G ++ K+ RE PA S V+G + + + ++ T EV
Sbjct: 308 GHDSGMIVFKLERERPAFS--VSGDTVFYVKDRFLRFFEFTTQKEV 351
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
L TL+GH + V ++H + P+++S +DD+ ++IW++Q++TCV L GH + F
Sbjct: 86 LFTLHGHLDYIRTVQFHH--ECPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASF 143
Query: 131 HPELPIVITGSEDGSVRVW 149
HP+ +V++ S D +VRVW
Sbjct: 144 HPKEDLVVSASLDQTVRVW 162
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 77 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPI 136
H+ V V ++ +P +SG DD +K+W+Y+ C+ TL GH I V FH E P
Sbjct: 50 HDGPVRGVHFH--ATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHECPW 107
Query: 137 VITGSEDGSVRVWH 150
+++ S+D ++R+W+
Sbjct: 108 IVSASDDQTIRIWN 121
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 44/79 (55%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ ++++WDY+ T + + H + V FH P+ ++G +D ++VW+
Sbjct: 21 RPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNY 80
Query: 152 GTHRLEISLTYGLERVWTI 170
THR +L L+ + T+
Sbjct: 81 KTHRCLFTLHGHLDYIRTV 99
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 50 ISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDY 109
+S + +VK + + TL GH V+CV ++ D ++S ++D+ ++IWD
Sbjct: 220 VSGADDRQVKIWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQD--IIVSNSEDKSIRIWDA 277
Query: 110 QNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSV 146
+T +QT + HPE+ ++ G + G +
Sbjct: 278 TKRTGIQTFRREHDRFWILSAHPEMNLLAAGHDSGMI 314
>sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica
GN=Os03g0711400 PE=2 SV=1
Length = 1218
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 90/166 (54%), Gaps = 10/166 (6%)
Query: 66 VATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHGQ 123
V ++ L GH++GVN ++ P ++SGADDR VK+W + V TL GH
Sbjct: 192 VDAVVKYVLEGHDRGVNWASFHP--TLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMN 249
Query: 124 NISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLE--RVWTISSLKGSNNVAI 181
N+S V FH + I+++ SED S+R+W + T R I T+ E R W +S+ N +A
Sbjct: 250 NVSCVMFHAKQDIIVSNSEDKSIRIWDA-TKRTGIQ-TFRREHDRFWILSAHPEMNLLAA 307
Query: 182 GYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEV 227
G+D G ++ K+ RE PA S V+G + + + ++ T EV
Sbjct: 308 GHDSGMIVFKLERERPAFS--VSGDTVFYVKDRFLRFFEFTTQKEV 351
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
L TL+GH + V ++H + P+++S +DD+ ++IW++Q++TCV L GH + F
Sbjct: 86 LFTLHGHLDYIRTVQFHH--EYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASF 143
Query: 131 HPELPIVITGSEDGSVRVWHSGTHR 155
HP+ +V++ S D +VRVW G R
Sbjct: 144 HPKEDLVVSASLDQTVRVWDIGALR 168
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 77 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPI 136
H+ V V ++ +P +SG DD +K+W+Y+ C+ TL GH I V FH E P
Sbjct: 50 HDGPVRGVHFH--ATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYPW 107
Query: 137 VITGSEDGSVRVWH 150
+++ S+D ++R+W+
Sbjct: 108 IVSASDDQTIRIWN 121
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 44/79 (55%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ ++++WDY+ T + + H + V FH P+ ++G +D ++VW+
Sbjct: 21 RPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNY 80
Query: 152 GTHRLEISLTYGLERVWTI 170
THR +L L+ + T+
Sbjct: 81 KTHRCLFTLHGHLDYIRTV 99
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 50 ISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDY 109
+S + +VK + + TL GH V+CV ++ D ++S ++D+ ++IWD
Sbjct: 220 VSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQD--IIVSNSEDKSIRIWDA 277
Query: 110 QNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSV 146
+T +QT + HPE+ ++ G + G +
Sbjct: 278 TKRTGIQTFRREHDRFWILSAHPEMNLLAAGHDSGMI 314
>sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica
GN=Os09g0127800 PE=2 SV=1
Length = 1218
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 90/166 (54%), Gaps = 10/166 (6%)
Query: 66 VATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHGQ 123
V ++ L GH++GVN ++ P ++SGADDR VK+W + V TL GH
Sbjct: 192 VDAVVKYVLEGHDRGVNWASFHP--TLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMN 249
Query: 124 NISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLE--RVWTISSLKGSNNVAI 181
N+S V FH + I+++ SED S+RVW + T R I T+ E R W +++ N +A
Sbjct: 250 NVSCVMFHAKQDIIVSNSEDKSIRVWDA-TKRTGIQ-TFRREHDRFWILAAHPEMNLLAA 307
Query: 182 GYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEV 227
G+D G ++ K+ RE PA S V+G + + + ++ T EV
Sbjct: 308 GHDNGMIVFKLERERPAFS--VSGDTVFYVKDRFLRFFEYSTQKEV 351
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
L TL+GH + V ++H + P+++S +DD+ ++IW++Q++TCV L GH + F
Sbjct: 86 LFTLHGHLDYIRTVQFHH--EYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASF 143
Query: 131 HPELPIVITGSEDGSVRVWHSGTHR 155
HP+ +V++ S D +VRVW G R
Sbjct: 144 HPKEDLVVSASLDQTVRVWDIGALR 168
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 77 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPI 136
H+ V V ++ +P +SG DD +K+W+Y+ C+ TL GH I V FH E P
Sbjct: 50 HDGPVRGVHFH--ATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYPW 107
Query: 137 VITGSEDGSVRVWH 150
+++ S+D ++R+W+
Sbjct: 108 IVSASDDQTIRIWN 121
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 44/79 (55%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ ++++WDY+ T + + H + V FH P+ ++G +D ++VW+
Sbjct: 21 RPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNY 80
Query: 152 GTHRLEISLTYGLERVWTI 170
THR +L L+ + T+
Sbjct: 81 KTHRCLFTLHGHLDYIRTV 99
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 50 ISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDY 109
+S + +VK + + TL GH V+CV ++ D ++S ++D+ +++WD
Sbjct: 220 VSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQD--IIVSNSEDKSIRVWDA 277
Query: 110 QNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSV 146
+T +QT + HPE+ ++ G ++G +
Sbjct: 278 TKRTGIQTFRREHDRFWILAAHPEMNLLAAGHDNGMI 314
>sp|Q55FR9|COPA_DICDI Coatomer subunit alpha OS=Dictyostelium discoideum GN=copa PE=3
SV=1
Length = 1221
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
+L GH++GVN ++ +PY++S +DD VK+W N V T GH N+S FHP
Sbjct: 199 SLEGHDRGVNWASFH--PTQPYIVSASDDHQVKLWR-MNDPIVDTFRGHYNNVSCALFHP 255
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192
++I+ SED ++RVW + +R WT++S N A G+D G ++ K+
Sbjct: 256 RQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTLASHPNQNLFAAGHDSGMIVFKL 315
Query: 193 GREEP 197
RE P
Sbjct: 316 ERERP 320
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Query: 50 ISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDY 109
+S + ++K +N Q L TL GH+ + V+++ + P+++S +DD +++IW++
Sbjct: 67 VSGGDDYKIKVWNYKQRRCLF--TLKGHKDYIRSVEFHR--EAPWIVSSSDDMVIRIWNW 122
Query: 110 QNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
Q++TC+ L GH + + FHP+ +V++ S D ++R+W
Sbjct: 123 QSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIW 162
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 70 ILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVC 129
+L+ HE V ++++ +P +SG DD +K+W+Y+ + C+ TL+GH I +V
Sbjct: 43 LLEKFDEHEGPVRGINFHMT--QPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVE 100
Query: 130 FHPELPIVITGSEDGSVRVWH 150
FH E P +++ S+D +R+W+
Sbjct: 101 FHREAPWIVSSSDDMVIRIWN 121
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ + ++DY+ KT ++ + H + + FH P+ ++G +D ++VW+
Sbjct: 21 RPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFHMTQPLFVSGGDDYKIKVWNY 80
Query: 152 GTHRLEISLT----------YGLERVWTISS 172
R +L + E W +SS
Sbjct: 81 KQRRCLFTLKGHKDYIRSVEFHREAPWIVSS 111
>sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2
SV=1
Length = 1218
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
Query: 66 VATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHGQ 123
V ++ L GH++GVN ++ P ++SGADDR VK+W V TL GH
Sbjct: 192 VDAIVKYVLEGHDRGVNWASFH--PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMN 249
Query: 124 NISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLE--RVWTISSLKGSNNVAI 181
N+S+V FH + I+++ SED S+RVW + T R I T+ E R W ++ N +A
Sbjct: 250 NVSSVMFHAKQDIIVSNSEDKSIRVWDA-TKRTGIQ-TFRREHDRFWILAVHPEINLLAA 307
Query: 182 GYDEGSVLLKVGREEPAVSMDVNGCKIIWAR 212
G+D G ++ K+ RE PA ++ +G + +A+
Sbjct: 308 GHDNGMIVFKLERERPAFAL--SGDSLFYAK 336
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
L TL GH + V ++H + P+++S +DD+ ++IW++Q++TC+ L GH + F
Sbjct: 86 LFTLLGHLDYIRTVQFHH--ENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASF 143
Query: 131 HPELPIVITGSEDGSVRVWHSGT 153
HP+ +V++ S D +VRVW G
Sbjct: 144 HPKEDLVVSASLDQTVRVWDIGA 166
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 77 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPI 136
HE V V +++ +P +SG DD +K+W+Y+ C+ TL GH I V FH E P
Sbjct: 50 HEGPVRGVHFHNS--QPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPW 107
Query: 137 VITGSEDGSVRVWH 150
+++ S+D ++R+W+
Sbjct: 108 IVSASDDQTIRIWN 121
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 44/79 (55%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ ++++WDY+ T + + H + V FH P+ ++G +D ++VW+
Sbjct: 21 RPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNY 80
Query: 152 GTHRLEISLTYGLERVWTI 170
THR +L L+ + T+
Sbjct: 81 KTHRCLFTLLGHLDYIRTV 99
>sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1
SV=2
Length = 1216
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 66 VATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHGQ 123
V ++ L GH++GVN ++ P ++SGADDR VK+W V TL GH
Sbjct: 192 VDAIVKYVLEGHDRGVNWAAFH--PTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMN 249
Query: 124 NISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGY 183
N+S+V FH + I+++ SED S+RVW + + +R W ++ N +A G+
Sbjct: 250 NVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMNLLAAGH 309
Query: 184 DEGSVLLKVGREEPAVSMDVNGCKIIWAR 212
D G ++ K+ RE PA ++ +G + +A+
Sbjct: 310 DSGMIVFKLERERPAFAL--SGDSLFYAK 336
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
L TL GH + V ++H + P+++S +DD+ ++IW++Q++TCV L GH + F
Sbjct: 86 LFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASF 143
Query: 131 HPELPIVITGSEDGSVRVWHSGTHR 155
HP+ +V++ S D +VRVW G R
Sbjct: 144 HPKEDLVVSASLDQTVRVWDIGALR 168
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 77 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPI 136
HE V V +++ +P +SG DD +K+W+Y+N C+ TL GH I V FH E P
Sbjct: 50 HEGPVRGVHFHNS--QPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPW 107
Query: 137 VITGSEDGSVRVWH 150
+++ S+D ++R+W+
Sbjct: 108 IVSASDDQTIRIWN 121
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 43/79 (54%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ ++++WDY+ T + + H + V FH P+ ++G +D ++VW+
Sbjct: 21 RPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNY 80
Query: 152 GTHRLEISLTYGLERVWTI 170
HR +L L+ + T+
Sbjct: 81 KNHRCLFTLLGHLDYIRTV 99
>sp|Q27954|COPA_BOVIN Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 SV=1
Length = 1224
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 74 LYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHGQNISAVCFH 131
L GH++GVN ++ P ++SGADDR VKIW V T GH N+S FH
Sbjct: 201 LEGHDRGVNWAAFH--PTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFH 258
Query: 132 PELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLK 191
P ++++ SED S+RVW + +R W +++ N A G+D G ++ K
Sbjct: 259 PRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFK 318
Query: 192 VGREEPAVSMDVN 204
+ RE PA ++ N
Sbjct: 319 LERERPAYAVHGN 331
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
L TL GH + ++H + P+++S +DD+ +++W++Q++TCV L GH + F
Sbjct: 86 LFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQF 143
Query: 131 HPELPIVITGSEDGSVRVWH-SGTHRLEIS 159
HP +V++ S D +VRVW SG + +S
Sbjct: 144 HPSEDLVVSASLDQTVRVWDISGLRKKNLS 173
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 77 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPI 136
H+ V +D++ +P +SG DD +K+W+Y+ + C+ TL GH I FH E P
Sbjct: 50 HDGPVRGIDFHK--QQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPW 107
Query: 137 VITGSEDGSVRVWH 150
+++ S+D ++RVW+
Sbjct: 108 ILSASDDQTIRVWN 121
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 43/78 (55%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ + ++++WDY+ T + + H + + FH + P+ ++G +D ++VW+
Sbjct: 21 RPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNY 80
Query: 152 GTHRLEISLTYGLERVWT 169
R +L L+ + T
Sbjct: 81 KLRRCLFTLLGHLDYIRT 98
>sp|Q8CIE6|COPA_MOUSE Coatomer subunit alpha OS=Mus musculus GN=Copa PE=1 SV=2
Length = 1224
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 74 LYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHGQNISAVCFH 131
L GH++GVN ++ P ++SGADDR VKIW V T GH N+S FH
Sbjct: 201 LEGHDRGVNWAAFH--PTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFH 258
Query: 132 PELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLK 191
P ++++ SED S+RVW + +R W +++ N A G+D G ++ K
Sbjct: 259 PRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFK 318
Query: 192 VGREEPAVSMDVN 204
+ RE PA ++ N
Sbjct: 319 LERERPAYAVHGN 331
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
L TL GH + ++H + P+++S +DD+ +++W++Q++TCV L GH + F
Sbjct: 86 LFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQF 143
Query: 131 HPELPIVITGSEDGSVRVWH-SGTHRLEIS 159
HP +V++ S D +VRVW SG + +S
Sbjct: 144 HPSEDLVVSASLDQTVRVWDISGLRKKNLS 173
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 77 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPI 136
H+ V +D++ +P +SG DD +K+W+Y+ + C+ TL GH I FH E P
Sbjct: 50 HDGPVRGIDFHK--QQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPW 107
Query: 137 VITGSEDGSVRVWH 150
+++ S+D ++RVW+
Sbjct: 108 ILSASDDQTIRVWN 121
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 43/78 (55%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ + ++++WDY+ T + + H + + FH + P+ ++G +D ++VW+
Sbjct: 21 RPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNY 80
Query: 152 GTHRLEISLTYGLERVWT 169
R +L L+ + T
Sbjct: 81 KLRRCLFTLLGHLDYIRT 98
>sp|P53621|COPA_HUMAN Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2
Length = 1224
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 74 LYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHGQNISAVCFH 131
L GH++GVN ++ P ++SGADDR VKIW V T GH N+S FH
Sbjct: 201 LEGHDRGVNWAAFH--PTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFH 258
Query: 132 PELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLK 191
P ++++ SED S+RVW + +R W +++ N A G+D G ++ K
Sbjct: 259 PRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFK 318
Query: 192 VGREEPAVSMDVN 204
+ RE PA ++ N
Sbjct: 319 LERERPAYAVHGN 331
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
L TL GH + ++H + P+++S +DD+ +++W++Q++TCV L GH + F
Sbjct: 86 LFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQF 143
Query: 131 HPELPIVITGSEDGSVRVWH-SGTHRLEIS 159
HP +V++ S D +VRVW SG + +S
Sbjct: 144 HPTEDLVVSASLDQTVRVWDISGLRKKNLS 173
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 77 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPI 136
H+ V +D++ +P +SG DD +K+W+Y+ + C+ TL GH I FH E P
Sbjct: 50 HDGPVRGIDFHK--QQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPW 107
Query: 137 VITGSEDGSVRVWH 150
+++ S+D ++RVW+
Sbjct: 108 ILSASDDQTIRVWN 121
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 43/78 (55%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ + ++++WDY+ T + + H + + FH + P+ ++G +D ++VW+
Sbjct: 21 RPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNY 80
Query: 152 GTHRLEISLTYGLERVWT 169
R +L L+ + T
Sbjct: 81 KLRRCLFTLLGHLDYIRT 98
>sp|Q96WV5|COPA_SCHPO Putative coatomer subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBPJ4664.04 PE=1 SV=1
Length = 1207
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 74 LYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHGQNISAVCFH 131
L GH++GVN ++ P ++S DDRLVK+W V T GH N+S FH
Sbjct: 208 LEGHDRGVNWCAFH--PTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFH 265
Query: 132 PELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLK 191
P ++++ SED ++RVW + +R W I+ N A +D G ++ K
Sbjct: 266 PHQELILSASEDKTIRVWDLNRRTAVQTFRRDNDRFWFITVHPKLNLFAAAHDSGVMVFK 325
Query: 192 VGREEPAVSMDVN 204
+ RE PA ++++N
Sbjct: 326 LERERPAHALNIN 338
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 70 ILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVC 129
+L +L GH V ++H + P+++S +DD+ ++IW++Q++ C+ L GH +
Sbjct: 87 LLFSLCGHMDYVRVCTFHH--EYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAA 144
Query: 130 FHPELPIVITGSEDGSVRVWHSGTHRLE 157
FHP ++++ S D +VRVW R++
Sbjct: 145 FHPSEDLIVSASLDQTVRVWDISGLRMK 172
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 21/115 (18%)
Query: 55 SSRVK--AFNPIQVATL-----------------ILKTLYGHEKGVNCVDYYHGGDKPYL 95
SSR K AF+P Q L +L GH+ V + ++ +P
Sbjct: 11 SSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFH--PTQPLF 68
Query: 96 ISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWH 150
+SG DD V +W+Y+++ + +L GH + FH E P +++ S+D ++R+W+
Sbjct: 69 VSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWN 123
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 40/69 (57%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P++++ + +++WDY+ T + +GH + + FHP P+ ++G +D V VW+
Sbjct: 23 QPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNY 82
Query: 152 GTHRLEISL 160
+ +L SL
Sbjct: 83 KSRKLLFSL 91
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 56 SRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114
SR K ++T + + TL GH+ V V ++ GG Y+IS +DD+ +++WDY+NK C
Sbjct: 311 SRDKTIKMWDISTGVCIMTLVGHDNWVRGVVWHPGGK--YIISASDDKTIRVWDYKNKRC 368
Query: 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
+TLE H +++ FH P VITGS D +V+VW
Sbjct: 369 QKTLEAHQHFCTSIDFHRSAPYVITGSVDQTVKVW 403
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V +HP +I+ S+D ++RV
Sbjct: 301 GRSGPFLLSGSRDKTIKMWDISTGVCIMTLVGHDNWVRGVVWHPGGKYIISASDDKTIRV 360
Query: 149 WHSGTHRLEISL 160
W R + +L
Sbjct: 361 WDYKNKRCQKTL 372
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
+KT++GH+ V+ V + GD +LIS + D+ +K+W+ CV+T GH + + V
Sbjct: 183 IKTMHGHDHNVSSVHFMPNGD--FLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRV 240
Query: 131 HPELPIVITGSEDGSVRVW 149
+ + ++ + S D +VRVW
Sbjct: 241 NQDGSLLASCSNDQTVRVW 259
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V V + G L S + D +K+WD+Q ++T+ GH N+S+V F
Sbjct: 142 RTLKGHTDAVQDVSFDQQGK--LLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFM 199
Query: 132 PELPIVITGSEDGSVRVWHSGT 153
P +I+ S D ++++W T
Sbjct: 200 PNGDFLISASRDKTIKMWELAT 221
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D +KIWDY+ +TL+GH + V F + ++ + S D ++++W
Sbjct: 121 MVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLLASCSADMTIKLW 175
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 117 TLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
+L GH I+ V FHP ++++ SED ++++W T E +L
Sbjct: 101 SLSGHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTL 144
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 69 LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAV 128
+ L TL GH+ V V ++ GG +++S ADD+ ++IWDY+NK C++TL H ++++
Sbjct: 329 MCLMTLVGHDNWVRGVQFHPGGK--FILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSL 386
Query: 129 CFHPELPIVITGSEDGSVRVW 149
FH P V+TGS D +V+VW
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVW 407
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V + + H G L S + D +K+WD+Q C++T+ GH N+S+V
Sbjct: 144 RTLKGHTDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 132 PELPIVITGSEDGSVRVW 149
P +++ S D ++++W
Sbjct: 202 PNGDHIVSASRDKTIKMW 219
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V FHP +++ ++D ++R+
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRI 364
Query: 149 WHSGTHRLEISL 160
W R +L
Sbjct: 365 WDYKNKRCMKTL 376
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
++T++GH+ V+ V GD +++S + D+ +K+W+ Q CV+T GH + + V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
+ + ++ + S D +VRVW T + L V IS S+ I GS
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETK 302
Query: 191 KVGREEP 197
K G+ P
Sbjct: 303 KSGKPGP 309
Score = 38.9 bits (89), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
L GH ++ V FHP +++T SED +++VW T E +L
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTL 146
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
+++ ++D +K+WDY+ +TL+GH ++ + F ++ + S D ++++W
Sbjct: 123 MVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|Q90ZL4|LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus laevis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 69 LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAV 128
+ L TL GH+ V V ++ GG +++S ADD+ ++IWDY+NK C++TL H ++++
Sbjct: 329 MCLMTLVGHDNWVRGVQFHPGGK--FILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSL 386
Query: 129 CFHPELPIVITGSEDGSVRVW 149
FH P V+TGS D +V+VW
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVW 407
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V + + H G L S + D +K+WD+Q C++T+ GH N+S+V
Sbjct: 144 RTLKGHTDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIM 201
Query: 132 PELPIVITGSEDGSVRVW 149
P +++ S D ++++W
Sbjct: 202 PNGDHIVSASRDKTIKMW 219
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V FHP +++ ++D ++R+
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRI 364
Query: 149 WHSGTHRLEISL 160
W R +L
Sbjct: 365 WDYKNKRCMKTL 376
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
L+T++GH+ V+ V GD +++S + D+ +K+W+ Q CV+T GH + + V
Sbjct: 185 LRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
+ + ++ + S D +VRVW T + L V IS S+ I GS
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETK 302
Query: 191 KVGREEP 197
+ G+ P
Sbjct: 303 RSGKPGP 309
Score = 38.9 bits (89), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
L GH ++ V FHP +++T SED +++VW T E +L
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTL 146
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
+++ ++D +K+WDY+ +TL+GH ++ + F ++ + S D ++++W
Sbjct: 123 MVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|Q9GL51|LIS1_PIG Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus
scrofa GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 56 SRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114
SR K V+T + L TL GH+ V V ++ GG +++S ADD+ +++WDY+NK C
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRC 372
Query: 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++TL H ++++ FH P V+TGS D +V+VW
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V + + H G L S + D +K+WD+Q C++T+ GH N+S+V
Sbjct: 144 RTLKGHTDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 132 PELPIVITGSEDGSVRVW 149
P +++ + D ++++W
Sbjct: 202 PNGDHIVSAARDKTIKMW 219
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
++T++GH+ V+ V GD +++S A D+ +K+W+ Q CV+T GH + + V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGD--HIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
+ + ++ + S D +VRVW T + L V IS S+ +I GS
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 191 KVGREEP 197
K G+ P
Sbjct: 303 KSGKPGP 309
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V FH +++ ++D ++RV
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 149 WHSGTHRLEISL 160
W R +L
Sbjct: 365 WDYKNKRCMKTL 376
Score = 39.3 bits (90), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D +K+WDY+ +TL+GH ++ + F ++ + S D ++++W
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
L GH ++ V FHP ++++ SED +++VW T E +L
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL 146
Score = 35.0 bits (79), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 23/120 (19%)
Query: 55 SSRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113
++R K +V T +KT GH + V V G + S ++D+ V++W K
Sbjct: 210 AARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG--TLIASCSNDQTVRVWVVATKE 267
Query: 114 CVQTLEGHGQNISAVCFHPEL--------------------PIVITGSEDGSVRVWHSGT 153
C L H + + + PE P +++GS D ++++W T
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|P63004|LIS1_RAT Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 56 SRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114
SR K V+T + L TL GH+ V V ++ GG +++S ADD+ +++WDY+NK C
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRC 372
Query: 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++TL H ++++ FH P V+TGS D +V+VW
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V + + H G L S + D +K+WD+Q C++T+ GH N+S+V
Sbjct: 144 RTLKGHTDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 132 PELPIVITGSEDGSVRVW 149
P +++ S D ++++W
Sbjct: 202 PNGDHIVSASRDKTIKMW 219
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
++T++GH+ V+ V GD +++S + D+ +K+W+ Q CV+T GH + + V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
+ + ++ + S D +VRVW T + L V IS S+ +I GS
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 191 KVGREEP 197
K G+ P
Sbjct: 303 KSGKPGP 309
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V FH +++ ++D ++RV
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 149 WHSGTHRLEISL 160
W R +L
Sbjct: 365 WDYKNKRCMKTL 376
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D +K+WDY+ +TL+GH ++ + F ++ + S D ++++W
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
L GH ++ V FHP ++++ SED +++VW T E +L
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL 146
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 23/120 (19%)
Query: 55 SSRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113
+SR K +V T +KT GH + V V G + S ++D+ V++W K
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG--TLIASCSNDQTVRVWVVATKE 267
Query: 114 CVQTLEGHGQNISAVCFHPEL--------------------PIVITGSEDGSVRVWHSGT 153
C L H + + + PE P +++GS D ++++W T
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|P63005|LIS1_MOUSE Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus
musculus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 56 SRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114
SR K V+T + L TL GH+ V V ++ GG +++S ADD+ +++WDY+NK C
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRC 372
Query: 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++TL H ++++ FH P V+TGS D +V+VW
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V + + H G L S + D +K+WD+Q C++T+ GH N+S+V
Sbjct: 144 RTLKGHTDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 132 PELPIVITGSEDGSVRVW 149
P +++ S D ++++W
Sbjct: 202 PNGDHIVSASRDKTIKMW 219
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
++T++GH+ V+ V GD +++S + D+ +K+W+ Q CV+T GH + + V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
+ + ++ + S D +VRVW T + L V IS S+ +I GS
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 191 KVGREEP 197
K G+ P
Sbjct: 303 KSGKPGP 309
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V FH +++ ++D ++RV
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 149 WHSGTHRLEISL 160
W R +L
Sbjct: 365 WDYKNKRCMKTL 376
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D +K+WDY+ +TL+GH ++ + F ++ + S D ++++W
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
L GH ++ V FHP ++++ SED +++VW T E +L
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL 146
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 23/120 (19%)
Query: 55 SSRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113
+SR K +V T +KT GH + V V G + S ++D+ V++W K
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG--TLIASCSNDQTVRVWVVATKE 267
Query: 114 CVQTLEGHGQNISAVCFHPEL--------------------PIVITGSEDGSVRVWHSGT 153
C L H + + + PE P +++GS D ++++W T
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|B0LSW3|LIS1_FELCA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Felis catus GN=PAFAH1B1 PE=2 SV=1
Length = 410
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 56 SRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114
SR K V+T + L TL GH+ V V ++ GG +++S ADD+ +++WDY+NK C
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRC 372
Query: 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++TL H ++++ FH P V+TGS D +V+VW
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V + + H G L S + D +K+WD+Q C++T+ GH N+S+V
Sbjct: 144 RTLKGHTDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 132 PELPIVITGSEDGSVRVW 149
P +++ S D ++++W
Sbjct: 202 PNGDHIVSASRDKTIKMW 219
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
++T++GH+ V+ V GD +++S + D+ +K+W+ Q CV+T GH + + V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
+ + ++ + S D +VRVW T + L V IS S+ +I GS
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 191 KVGREEP 197
K G+ P
Sbjct: 303 KSGKPGP 309
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V FH +++ ++D ++RV
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 149 WHSGTHRLEISL 160
W R +L
Sbjct: 365 WDYKNKRCMKTL 376
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D +K+WDY+ +TL+GH ++ + F ++ + S D ++++W
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
L GH ++ V FHP ++++ SED +++VW T E +L
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL 146
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 23/120 (19%)
Query: 55 SSRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113
+SR K +V T +KT GH + V V G + S ++D+ V++W K
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG--TLIASCSNDQTVRVWVVATKE 267
Query: 114 CVQTLEGHGQNISAVCFHPEL--------------------PIVITGSEDGSVRVWHSGT 153
C L H + + + PE P +++GS D ++++W T
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|P43033|LIS1_BOVIN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos
taurus GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 56 SRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114
SR K V+T + L TL GH+ V V ++ GG +++S ADD+ +++WDY+NK C
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRC 372
Query: 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++TL H ++++ FH P V+TGS D +V+VW
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V + + H G L S + D +K+WD+Q C++T+ GH N+S+V
Sbjct: 144 RTLKGHTDSVEDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 132 PELPIVITGSEDGSVRVW 149
P +++ S D ++++W
Sbjct: 202 PNGDHIVSASRDKTIKMW 219
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
++T++GH+ V+ V GD +++S + D+ +K+W+ Q CV+T GH + + V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
+ + ++ + S D +VRVW T + L V IS S+ +I GS
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 191 KVGREEP 197
K G+ P
Sbjct: 303 KSGKPGP 309
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V FH +++ ++D ++RV
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 149 WHSGTHRLEISL 160
W R +L
Sbjct: 365 WDYKNKRCMKTL 376
Score = 39.3 bits (90), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D +K+WDY+ +TL+GH ++ + F ++ + S D ++++W
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLW 177
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
L GH ++ V FHP ++++ SED +++VW T E +L
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL 146
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 23/120 (19%)
Query: 55 SSRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113
+SR K +V T +KT GH + V V G + S ++D+ V++W K
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG--TLIASCSNDQTVRVWVVATKE 267
Query: 114 CVQTLEGHGQNISAVCFHPEL--------------------PIVITGSEDGSVRVWHSGT 153
C L H + + + PE P +++GS D ++++W T
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|Q8HXX0|LIS1_MACFA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 56 SRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114
SR K V+T + L TL GH+ V V ++ GG +++S ADD+ +++WDY+NK C
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRC 372
Query: 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++TL H ++++ FH P V+TGS D +V+VW
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V + + H G L S + D +K+WD+Q C++T+ GH N+S+V
Sbjct: 144 RTLKGHTDSVQDISFDHSGK--LLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 132 PELPIVITGSEDGSVRVW 149
P +++ S D ++++W
Sbjct: 202 PNGDHLVSASRDKTIKMW 219
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
++T++GH+ V+ V GD +L+S + D+ +K+W+ Q CV+T GH + + V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGD--HLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
+ + ++ + S D +VRVW T + L V IS S+ +I GS
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 191 KVGREEP 197
K G+ P
Sbjct: 303 KSGKPGP 309
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V FH +++ ++D ++RV
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 149 W 149
W
Sbjct: 365 W 365
Score = 39.7 bits (91), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D +K+WDY+ +TL+GH ++ + F ++ + S D ++++W
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLTSCSADMTIKLW 177
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
L GH ++ V FHP ++++ SED +++VW T E +L
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL 146
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 23/120 (19%)
Query: 55 SSRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113
+SR K +V T +KT GH + V V G + S ++D+ V++W K
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG--TLIASCSNDQTVRVWVVATKE 267
Query: 114 CVQTLEGHGQNISAVCFHPEL--------------------PIVITGSEDGSVRVWHSGT 153
C L H + + + PE P +++GS D ++++W T
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|Q5REG7|LIS1_PONAB Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 56 SRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114
SR K V+T + L TL GH+ V V ++ GG +++S ADD+ +++WDY+NK C
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRC 372
Query: 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++TL H ++++ FH P V+TGS D +V+VW
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH + + + H G L S + D +K+WD+Q C++T+ GH N+S+V
Sbjct: 144 RTLKGHTDSIQDIPFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 132 PELPIVITGSEDGSVRVW 149
P +++ S D ++++W
Sbjct: 202 PNGDHIVSASRDKTIKMW 219
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
++T++GH+ V+ V GD +++S + D+ +K+W+ Q CV+T GH + + V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
+ + ++ + S D +VRVW T + L V IS S+ +I GS
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 191 KVGREEP 197
K G+ P
Sbjct: 303 KSGKPGP 309
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V FH +++ ++D ++RV
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 149 WHSGTHRLEISL 160
W R +L
Sbjct: 365 WDYKNKRCMKTL 376
Score = 39.7 bits (91), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D +K+WDY+ +TL+GH +I + F ++ + S D ++++W
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSIQDIPFDHSGKLLASCSADMTIKLW 177
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
L GH ++ V FHP ++++ SED +++VW T E +L
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL 146
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 23/120 (19%)
Query: 55 SSRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113
+SR K +V T +KT GH + V V G + S ++D+ V++W K
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG--TLIASCSNDQTVRVWVVATKE 267
Query: 114 CVQTLEGHGQNISAVCFHPEL--------------------PIVITGSEDGSVRVWHSGT 153
C L H + + + PE P +++GS D ++++W T
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|P43034|LIS1_HUMAN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo
sapiens GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 56 SRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114
SR K V+T + L TL GH+ V V ++ GG +++S ADD+ +++WDY+NK C
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRC 372
Query: 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++TL H ++++ FH P V+TGS D +V+VW
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V + + H G L S + D +K+WD+Q C++T+ GH N+S+V
Sbjct: 144 RTLKGHTDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 132 PELPIVITGSEDGSVRVW 149
P +++ S D ++++W
Sbjct: 202 PNGDHIVSASRDKTIKMW 219
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
++T++GH+ V+ V GD +++S + D+ +K+W+ Q CV+T GH + + V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
+ + ++ + S D +VRVW T + L V IS S+ +I GS
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 191 KVGREEP 197
K G+ P
Sbjct: 303 KSGKPGP 309
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V FH +++ ++D ++RV
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 149 WHSGTHRLEISL 160
W R +L
Sbjct: 365 WDYKNKRCMKTL 376
Score = 39.3 bits (90), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D +K+WDY+ +TL+GH ++ + F ++ + S D ++++W
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
L GH ++ V FHP ++++ SED +++VW T E +L
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL 146
Score = 36.2 bits (82), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 23/120 (19%)
Query: 55 SSRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113
+SR K +V T +KT GH + V V G + S ++D+ V++W K
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG--TLIASCSNDQTVRVWVVATKE 267
Query: 114 CVQTLEGHGQNISAVCFHPEL--------------------PIVITGSEDGSVRVWHSGT 153
C L H + + + PE P +++GS D ++++W T
Sbjct: 268 CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|Q803D2|LIS1B_DANRE Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3
Length = 410
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 56 SRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114
SR K ++T + L TL GH+ V V ++ GG +++S ADD+ ++IWDY+NK C
Sbjct: 315 SRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGR--FVVSCADDKTLRIWDYKNKRC 372
Query: 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++TL H ++++ FH P V+TGS D +V+VW
Sbjct: 373 MKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V FHP V++ ++D ++R+
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRI 364
Query: 149 WHSGTHRLEISLTYGLERVWTISSLKGSNNVAIG 182
W R +L+ V ++ K S V G
Sbjct: 365 WDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTG 398
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 50 ISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDY 109
+S E + +K ++ A +TL GH V + + G L S + D +K+WD+
Sbjct: 124 VSASEDATIKVWD--YEAGDFERTLKGHTDSVQDISFDQTGK--LLASCSADMTIKLWDF 179
Query: 110 QNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGT 153
Q C++T+ GH N+S+V P +++ S D ++++W T
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVAT 223
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
++T++GH+ V+ V GD +++S + D+ +K+W+ CV+T GH + + V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
+ + ++ + S D +VRVW T + L V IS S + I GS
Sbjct: 243 NQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENK 302
Query: 191 KVGREEP 197
K G+ P
Sbjct: 303 KSGKPGP 309
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D +K+WDY+ +TL+GH ++ + F ++ + S D ++++W
Sbjct: 123 MVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLW 177
Score = 35.4 bits (80), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
L GH ++ V FHP ++++ SED +++VW
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVW 135
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 373 MKTLSAHEHFVTSLDFHKAS--PYVVTGSVDQTVKVWE 408
>sp|Q4RJN5|LIS1_TETNG Lissencephaly-1 homolog OS=Tetraodon nigroviridis GN=pafah1b1 PE=3
SV=1
Length = 410
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 56 SRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114
SR K V+T + L TL GH+ V V ++ GG ++++ ADD+ ++IWDY+NK C
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHPGGK--FIVTCADDKTLRIWDYKNKRC 372
Query: 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++TL H ++++ FH P V+TGS D +V+VW
Sbjct: 373 MKTLCAHEHFVTSLDFHKAAPYVVTGSVDQTVKVW 407
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V FHP ++T ++D ++R+
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHPGGKFIVTCADDKTLRI 364
Query: 149 WHSGTHRLEISL 160
W R +L
Sbjct: 365 WDYKNKRCMKTL 376
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V + + G L S + D +K+WD+Q+ C++T+ GH N+S+V
Sbjct: 144 RTLKGHTDSVQDISFDLTGK--LLASCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIM 201
Query: 132 PELPIVITGSEDGSVRVWHSGT 153
P +I+ S D ++++W T
Sbjct: 202 PNGDHIISASRDKTMKMWEVAT 223
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
++T++GH+ V+ V GD ++IS + D+ +K+W+ CV+T GH + + V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGD--HIISASRDKTMKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 131 HPELPIVITGSEDGSVRVW 149
+ + ++ + S D +VRVW
Sbjct: 243 NQDGTLIASCSNDQTVRVW 261
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 23/120 (19%)
Query: 55 SSRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113
+SR K +VAT +KT GH + V V G + S ++D+ V++W +K
Sbjct: 210 ASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGT--LIASCSNDQTVRVWVVASKE 267
Query: 114 CVQTLEGHGQNISAVCFHPEL--------------------PIVITGSEDGSVRVWHSGT 153
C L H + + + PE P +++GS D ++++W T
Sbjct: 268 CKAELREHEHVVECISWAPESAHPTILDATSSESKKSGKPGPFLLSGSRDKTIKMWDVST 327
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D +K+WDY+ +TL+GH ++ + F ++ + S D ++++W
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLTGKLLASCSADMTIKLW 177
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
L GH ++ V FHP ++++ SED +++VW T E +L
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL 146
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 373 MKTLCAHEHFVTSLDFHKAA--PYVVTGSVDQTVKVWE 408
>sp|Q7T394|LIS1A_DANRE Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3
Length = 410
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 69 LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAV 128
+ L TL GH+ V V + GG Y++S ADD+ ++IWDY+NK C +TL H ++++
Sbjct: 329 MCLMTLVGHDNWVRGVLVHPGGK--YIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSL 386
Query: 129 CFHPELPIVITGSEDGSVRVW 149
FH P V+TGS D +V+VW
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVW 407
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V + + H G L S + D +K+WD+Q C++T+ GH N+S+V
Sbjct: 144 RTLKGHTDSVQDISFDHTGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 132 PELPIVITGSEDGSVRVWHSGT 153
P +++ S D ++++W T
Sbjct: 202 PNGDHIVSASRDKTIKMWEVAT 223
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V HP +++ ++D ++R+
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRI 364
Query: 149 WHSGTHRLEISLT 161
W R +L+
Sbjct: 365 WDYKNKRCTKTLS 377
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
++T++GH+ V+ V GD +++S + D+ +K+W+ CV+T GH + + V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
+ + ++ + S D +VRVW T + L V IS S + I GS
Sbjct: 243 NQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETK 302
Query: 191 KVGREEP 197
K G+ P
Sbjct: 303 KSGKPGP 309
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
L GH ++ V FHP ++++ SED +++VW T E +L
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTL 146
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D +K+WD++ +TL+GH ++ + F ++ + S D ++++W
Sbjct: 123 IVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLW 177
Score = 32.3 bits (72), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
KTL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 374 KTLSAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|Q9PTR5|LIS1_CHICK Lissencephaly-1 homolog OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 56 SRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114
SR K ++T + L TL GH+ V V ++ GG +++S ADD+ +++WD++NK C
Sbjct: 315 SRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDFKNKRC 372
Query: 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++TL H ++++ FH P V+TGS D +V+VW
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V + + H G L S + D +K+WD+Q C++T+ GH N+S+V
Sbjct: 144 RTLKGHTDSVQDISFDHTGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 132 PELPIVITGSEDGSVRVW 149
P +++ S D ++++W
Sbjct: 202 PNGDHIVSASRDKTIKMW 219
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
++T++GH+ V+ V GD +++S + D+ +K+W+ Q CV+T GH + + V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
+ + ++ + S D +VRVW T + L V IS S+ I GS
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETK 302
Query: 191 KVGREEP 197
K G+ P
Sbjct: 303 KSGKPGP 309
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V FH +++ ++D ++RV
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 149 W 149
W
Sbjct: 365 W 365
Score = 38.9 bits (89), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D +K+WDY+ +TL+GH ++ + F ++ + S D ++++W
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLW 177
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
L GH ++ V FHP ++++ SED +++VW T E +L
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL 146
Score = 36.2 bits (82), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 23/116 (19%)
Query: 55 SSRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113
+SR K +V T +KT GH + V V G + S ++D+ V++W K
Sbjct: 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG--TLIASCSNDQTVRVWVVATKE 267
Query: 114 CVQTLEGHGQNISAVCFHPEL--------------------PIVITGSEDGSVRVW 149
C L H + + + PE P +++GS D ++++W
Sbjct: 268 CKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>sp|Q5RGE6|HSP7E_DANRE Heat shock 70 kDa protein 14 OS=Danio rerio GN=hspa14 PE=2 SV=1
Length = 504
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Query: 229 ENITAGVVLTLSVHVTIKYRLDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYDG 288
E+ T + L+ ++ D+S + R++ KL +A+ H LSTL S+N FV+SLYDG
Sbjct: 229 ESFTQELAQHLAAEFKKTFKQDVSGNARAMMKLMNSADVAKHTLSTLGSANCFVDSLYDG 288
Query: 289 LDFHHNVSRARFESLIGGLLTSFVQPCMHVLS--TLQSSNV 327
+DF NVSRARFE + L +QP +L L +S+V
Sbjct: 289 MDFECNVSRARFELICSSLFNKCIQPIKSLLEQVNLSTSDV 329
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 317 HVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNITHDQI 376
H LSTL S+N FV+SLYDG+DF NVSRARFE + L +QPI+ +L + N++ +
Sbjct: 270 HTLSTLGSANCFVDSLYDGMDFECNVSRARFELICSSLFNKCIQPIKSLLEQVNLSTSDV 329
Query: 377 NK 378
NK
Sbjct: 330 NK 331
>sp|Q5IS43|LIS1_PANTR Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan
troglodytes GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 56 SRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114
SR K V+T + L TL GH+ V V ++ GG +++S ADD+ +++WDY+NK C
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRC 372
Query: 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++TL H ++++ FH P V+TG D +V+VW
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGFVDQTVKVW 407
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V + + H G L S + D +K+WD+Q C++T+ GH N+S+V
Sbjct: 144 RTLKGHTDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 132 PELPIVITGSEDGSVRVW 149
P +++ S D ++++W
Sbjct: 202 PNGDHIVSASRDKTIKMW 219
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
++T++GH+ V+ V GD +++S + D+ +K+W+ Q CV+T GH + + V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
+ + ++ + S D +VRVW T + L V IS S+ +I GS
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 191 KVGREEP 197
K G+ P
Sbjct: 303 KSGKPGP 309
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 89 GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148
G P+L+SG+ D+ +K+WD C+ TL GH + V FH +++ ++D ++RV
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 149 WHSGTHRLEISL 160
W R +L
Sbjct: 365 WDYKNKRCMKTL 376
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 33/55 (60%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D +K+WDY+ +TL+GH ++ + F ++ + S D ++++W
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
L GH ++ V FHP ++++ SED +++VW T E +L
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL 146
Score = 32.0 bits (71), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTL HE V +D++ PY+++G D+ VK+W+
Sbjct: 373 MKTLNAHEHFVTSLDFHKTA--PYVVTGFVDQTVKVWE 408
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V V + G + + SG+DD +KIWD + TC QTLEGHG ++ +V F
Sbjct: 919 QTLEGHGGRVQSVAFSPDGQR--VASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFS 976
Query: 132 PELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSV 188
P+ V +GS D ++++W + + +L VW+++ VA G D+ ++
Sbjct: 977 PDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTI 1033
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V V + G + + SG+DD+ +KIWD + TC QTLEGHG + +V F
Sbjct: 1003 QTLEGHGGSVWSVAFSPDGQR--VASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFS 1060
Query: 132 PELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSV 188
P+ V +GS+D ++++W + + +L + VW+++ VA G +G++
Sbjct: 1061 PDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTI 1117
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V V + D+ + SG+DD+ +KIWD + TC QTLEGHG + +V F
Sbjct: 877 QTLEGHGGSVWSVAF--SPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFS 934
Query: 132 PELPIVITGSEDGSVRVWHSGT 153
P+ V +GS+D ++++W + +
Sbjct: 935 PDGQRVASGSDDHTIKIWDAAS 956
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V V + G + + SG+DD +KIWD + TC QTLEGHG ++ +V F
Sbjct: 1045 QTLEGHGGWVQSVVFSPDGQR--VASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFS 1102
Query: 132 PELPIVITGSEDGSVRVWHSGT 153
P+ V +GS DG++++W + +
Sbjct: 1103 PDGQRVASGSIDGTIKIWDAAS 1124
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V V + G + + SG+DD+ +KIWD + T QTLEGHG ++ +V F
Sbjct: 835 QTLEGHGSSVLSVAFSADGQR--VASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFS 892
Query: 132 PELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSV 188
P+ V +GS+D ++++W + + +L RV +++ VA G D+ ++
Sbjct: 893 PDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTI 949
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V V + G + + SG+ D+ +KIWD + TC QTLEGHG + +V F
Sbjct: 1171 QTLEGHGGWVQSVAFSPDGQR--VASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFS 1228
Query: 132 PELPIVITGSEDGSVRVWHSGTHRLEISLTYG 163
P+ V +GS D ++++W + + +L G
Sbjct: 1229 PDGQRVASGSSDNTIKIWDTASGTCTQTLNVG 1260
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V V + G + + SG+ D+ +KIWD + TC QTLEGHG ++ +V F
Sbjct: 961 QTLEGHGSSVLSVAFSPDGQR--VASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFS 1018
Query: 132 PELPIVITGSEDGSVRVWHSGT 153
P+ V +GS+D ++++W + +
Sbjct: 1019 PDGQRVASGSDDKTIKIWDTAS 1040
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 66 VATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNI 125
V+ +TL GH V V + G + + SG+ D +KIWD + TC QTLEGHG +
Sbjct: 1081 VSGTCTQTLEGHGDSVWSVAFSPDGQR--VASGSIDGTIKIWDAASGTCTQTLEGHGGWV 1138
Query: 126 SAVCFHPELPIVITGSEDGSVRVWHSGT 153
+V F P+ V +GS DG++++W + +
Sbjct: 1139 HSVAFSPDGQRVASGSIDGTIKIWDAAS 1166
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
+TL GH V+ V + G + + SG+ D +KIWD + TC QTLEGHG + +V F
Sbjct: 1129 QTLEGHGGWVHSVAFSPDGQR--VASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFS 1186
Query: 132 PELPIVITGSEDGSVRVWHSGT 153
P+ V +GS D ++++W + +
Sbjct: 1187 PDGQRVASGSSDKTIKIWDTAS 1208
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 114 CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSL 173
C QTLEGHG ++ +V F + V +GS+D ++++W + + +L VW+++
Sbjct: 833 CTQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFS 892
Query: 174 KGSNNVAIGYDEGSV 188
VA G D+ ++
Sbjct: 893 PDRERVASGSDDKTI 907
>sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=COP1 PE=1 SV=2
Length = 1201
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 74 LYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEGHGQNISAVCFH 131
L GH +GVN ++ P ++SG+DDR VK+W V T GH N+ +V FH
Sbjct: 205 LEGHTRGVNWASFH--PTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFH 262
Query: 132 PELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLK 191
P ++I+ ED ++RVW +R W I++ N +D G ++ K
Sbjct: 263 PHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLIAAHPHINLFGAAHDSGIMVFK 322
Query: 192 VGREEP 197
+ RE P
Sbjct: 323 LDRERP 328
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 70 ILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVC 129
+L HE V +D++ +P +S DD +K+W C+ TL GH + V
Sbjct: 45 LLHRFEDHEGPVRGLDFH--PTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVF 102
Query: 130 FHPELPIVITGSEDGSVRVWHSGTHRLEISLTYG 163
FH ELP +I+ S+D ++R+W+ +R EI+ G
Sbjct: 103 FHRELPWIISASDDQTIRIWN-WQNRKEIACLTG 135
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
L TL GH V V ++H + P++IS +DD+ ++IW++QN+ + L GH + F
Sbjct: 88 LYTLTGHLDYVRTV-FFHR-ELPWIISASDDQTIRIWNWQNRKEIACLTGHNHFVMCAQF 145
Query: 131 HPELPIVITGSEDGSVRVW 149
HP ++++ S D ++R+W
Sbjct: 146 HPTDDLIVSASLDETIRIW 164
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151
+P+++ +++WDY+ T + E H + + FHP PI ++ +D +++VW
Sbjct: 23 RPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWSL 82
Query: 152 GTHRLEISLTYGLERVWTI 170
T++ +LT L+ V T+
Sbjct: 83 DTNKCLYTLTGHLDYVRTV 101
>sp|Q5FVX7|HSP7E_XENTR Heat shock 70 kDa protein 14 OS=Xenopus tropicalis GN=hspa14 PE=2
SV=1
Length = 508
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%)
Query: 247 YRLDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGG 306
Y+ DI + R++ KL +A+ H LSTL SSN FV+SLYDG+DF NVSRARFE +
Sbjct: 247 YKQDIRGNARAMMKLMNSADVAKHALSTLGSSNCFVDSLYDGIDFDCNVSRARFELICSS 306
Query: 307 LLTSFVQPCMHVLSTL 322
L + P +L +
Sbjct: 307 LFNQCIDPIKKLLEQI 322
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 317 HVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNITHDQI 376
H LSTL SSN FV+SLYDG+DF NVSRARFE + L + PI+ +L + + +
Sbjct: 270 HALSTLGSSNCFVDSLYDGIDFDCNVSRARFELICSSLFNQCIDPIKKLLEQIGFKANDV 329
Query: 377 NK 378
N+
Sbjct: 330 NQ 331
>sp|B4KT48|LIS1_DROMO Lissencephaly-1 homolog OS=Drosophila mojavensis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 69 LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAV 128
L L TL GH+ V + ++ GG YL+S +DD+ +++WD +NK C++TL H +++
Sbjct: 330 LCLLTLNGHDNWVRGLAFHPGG--KYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSI 387
Query: 129 CFHPELPIVITGSEDGSVRVW 149
FH P VI+GS D SV+VW
Sbjct: 388 DFHKAHPYVISGSVDQSVKVW 408
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 64 IQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQ 123
Q + +KT++GH+ V+ V + GD Y++S + DR +K+W+ CV+T GH +
Sbjct: 179 FQQSYECVKTMHGHDHNVSSVAFVPAGD--YVLSASRDRTIKMWEVATGYCVKTYTGHRE 236
Query: 124 NISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
+ V H E I T S D ++RVW + + ++ L
Sbjct: 237 WVRMVRVHIEGSIFATCSNDHTIRVWLTNSKDCKVEL 273
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 87 YHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSV 146
+H G P+L SG+ D+ ++IWD C+ TL GH + + FHP +++ S+D ++
Sbjct: 306 HHQG--PFLASGSRDKTIRIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTI 363
Query: 147 RVW 149
RVW
Sbjct: 364 RVW 366
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK-TCVQTLEGHGQNISAVCF 130
++L GH V V + G L S + D +K+WD+Q CV+T+ GH N+S+V F
Sbjct: 144 RSLKGHTDSVQDVAFDAQG--KLLASCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAF 201
Query: 131 HPELPIVITGSEDGSVRVWHSGT 153
P V++ S D ++++W T
Sbjct: 202 VPAGDYVLSASRDRTIKMWEVAT 224
Score = 40.4 bits (93), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 34/55 (61%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D +KIWD++ ++L+GH ++ V F + ++ + S D S+++W
Sbjct: 123 MVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLW 177
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 117 TLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
+L GH +I+ V FHP ++++ SED ++++W T E SL
Sbjct: 103 SLTGHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSL 146
Score = 35.8 bits (81), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTLY H+ +D++ PY+ISG+ D+ VK+W+
Sbjct: 374 MKTLYAHQHFCTSIDFHKA--HPYVISGSVDQSVKVWE 409
>sp|B4QHG6|LIS1_DROSI Lissencephaly-1 homolog OS=Drosophila simulans GN=Lis-1 PE=3 SV=1
Length = 411
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 69 LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAV 128
L L TL GH+ V + ++ GG YL+S +DD+ +++WD +NK C++TL H +++
Sbjct: 330 LCLLTLSGHDNWVRGLAFHPGG--KYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSI 387
Query: 129 CFHPELPIVITGSEDGSVRVW 149
FH P VI+GS D +V+VW
Sbjct: 388 DFHKAHPYVISGSVDQTVKVW 408
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 64 IQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQ 123
Q + +KT++GH+ V+ V + GD Y++S + DR +K+W+ CV+T GH +
Sbjct: 179 FQQSYECIKTMHGHDHNVSSVAFVPAGD--YVLSASRDRTIKMWEVATGYCVKTYTGHRE 236
Query: 124 NISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
+ V H E I T S D ++RVW + + ++ L
Sbjct: 237 WVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVEL 273
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 87 YHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSV 146
+H G P+L SG+ D+ ++IWD C+ TL GH + + FHP +++ S+D ++
Sbjct: 306 HHQG--PFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTI 363
Query: 147 RVW 149
RVW
Sbjct: 364 RVW 366
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK-TCVQTLEGHGQNISAVCF 130
++L GH V V + G L S + D +K+WD+Q C++T+ GH N+S+V F
Sbjct: 144 RSLKGHTDSVQDVAFDAQG--KLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAF 201
Query: 131 HPELPIVITGSEDGSVRVWHSGT 153
P V++ S D ++++W T
Sbjct: 202 VPAGDYVLSASRDRTIKMWEVAT 224
Score = 40.0 bits (92), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 117 TLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
+L GH +I+ V FHP ++++ SED ++R+W T E SL
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSL 146
Score = 39.7 bits (91), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 34/55 (61%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D ++IWD++ ++L+GH ++ V F + ++ + S D S+++W
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLW 177
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTLY H+ +D++ PY+ISG+ D+ VK+W+
Sbjct: 374 MKTLYAHQHFCTSIDFHKA--HPYVISGSVDQTVKVWE 409
>sp|B4HSL3|LIS1_DROSE Lissencephaly-1 homolog OS=Drosophila sechellia GN=Lis-1 PE=3 SV=1
Length = 411
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 69 LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAV 128
L L TL GH+ V + ++ GG YL+S +DD+ +++WD +NK C++TL H +++
Sbjct: 330 LCLLTLSGHDNWVRGLAFHPGG--KYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSI 387
Query: 129 CFHPELPIVITGSEDGSVRVW 149
FH P VI+GS D +V+VW
Sbjct: 388 DFHKAHPYVISGSVDQTVKVW 408
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 64 IQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQ 123
Q + +KT++GH+ V+ V + GD Y++S + DR +K+W+ CV+T GH +
Sbjct: 179 FQQSYECIKTMHGHDHNVSSVAFVPAGD--YVLSASRDRTIKMWEVATGYCVKTYTGHRE 236
Query: 124 NISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
+ V H E I T S D ++RVW + + ++ L
Sbjct: 237 WVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVEL 273
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 87 YHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSV 146
+H G P+L SG+ D+ ++IWD C+ TL GH + + FHP +++ S+D ++
Sbjct: 306 HHQG--PFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTI 363
Query: 147 RVW 149
RVW
Sbjct: 364 RVW 366
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK-TCVQTLEGHGQNISAVCF 130
++L GH V V + G L S + D +K+WD+Q C++T+ GH N+S+V F
Sbjct: 144 RSLKGHTDSVQDVAFDAQG--KLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAF 201
Query: 131 HPELPIVITGSEDGSVRVWHSGT 153
P V++ S D ++++W T
Sbjct: 202 VPAGDYVLSASRDRTIKMWEVAT 224
Score = 40.0 bits (92), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 117 TLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
+L GH +I+ V FHP ++++ SED ++R+W T E SL
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSL 146
Score = 39.7 bits (91), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 34/55 (61%)
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
++S ++D ++IWD++ ++L+GH ++ V F + ++ + S D S+++W
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLW 177
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTLY H+ +D++ PY+ISG+ D+ VK+W+
Sbjct: 374 MKTLYAHQHFCTSIDFHKA--HPYVISGSVDQTVKVWE 409
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,415,262
Number of Sequences: 539616
Number of extensions: 5192043
Number of successful extensions: 23732
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 608
Number of HSP's that attempted gapping in prelim test: 16475
Number of HSP's gapped (non-prelim): 6611
length of query: 381
length of database: 191,569,459
effective HSP length: 119
effective length of query: 262
effective length of database: 127,355,155
effective search space: 33367050610
effective search space used: 33367050610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)