Query psy4650
Match_columns 381
No_of_seqs 408 out of 3806
Neff 10.7
Searched_HMMs 29240
Date Fri Aug 16 22:15:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4650.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4650hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 1.2E-27 4.2E-32 211.9 26.5 213 36-253 16-259 (304)
2 1vyh_C Platelet-activating fac 100.0 2.4E-27 8.1E-32 218.9 24.7 211 38-253 113-369 (410)
3 3ow8_A WD repeat-containing pr 100.0 1.4E-26 4.9E-31 206.6 23.3 195 37-252 126-320 (321)
4 1got_B GT-beta; complex (GTP-b 99.9 5.1E-26 1.8E-30 204.7 25.4 199 37-253 101-301 (340)
5 3ow8_A WD repeat-containing pr 99.9 4.2E-26 1.4E-30 203.5 24.5 155 36-192 35-192 (321)
6 4gqb_B Methylosome protein 50; 99.9 2.9E-26 9.8E-31 206.4 23.0 198 37-255 131-333 (344)
7 1vyh_C Platelet-activating fac 99.9 4.8E-26 1.6E-30 210.2 24.7 210 37-251 154-409 (410)
8 4gqb_B Methylosome protein 50; 99.9 3.3E-26 1.1E-30 206.0 22.7 199 36-254 85-290 (344)
9 3frx_A Guanine nucleotide-bind 99.9 7.5E-26 2.6E-30 201.8 24.4 199 37-254 21-228 (319)
10 3frx_A Guanine nucleotide-bind 99.9 1.1E-25 3.9E-30 200.6 25.5 210 38-253 70-317 (319)
11 4ery_A WD repeat-containing pr 99.9 1.1E-25 3.9E-30 199.8 24.7 199 36-254 26-224 (312)
12 3fm0_A Protein CIAO1; WDR39,SG 99.9 3.7E-26 1.3E-30 206.0 21.8 198 36-252 19-224 (345)
13 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.6E-25 5.6E-30 201.8 25.8 218 36-256 64-338 (345)
14 2pbi_B Guanine nucleotide-bind 99.9 2.1E-25 7.2E-30 201.8 24.9 201 37-254 68-316 (354)
15 1got_B GT-beta; complex (GTP-b 99.9 1.5E-25 5E-30 201.7 23.5 183 48-250 156-340 (340)
16 2pbi_B Guanine nucleotide-bind 99.9 1.9E-25 6.6E-30 202.0 24.3 195 37-250 158-354 (354)
17 1nr0_A Actin interacting prote 99.9 3.8E-25 1.3E-29 214.5 27.5 216 37-254 63-356 (611)
18 2xzm_R RACK1; ribosome, transl 99.9 4.9E-25 1.7E-29 198.5 24.9 192 42-253 35-244 (343)
19 4aow_A Guanine nucleotide-bind 99.9 8E-25 2.7E-29 196.2 25.3 217 36-254 41-338 (340)
20 2hes_X YDR267CP; beta-propelle 99.9 1E-24 3.5E-29 195.3 25.8 214 36-252 61-327 (330)
21 2hes_X YDR267CP; beta-propelle 99.9 7.2E-25 2.5E-29 196.3 24.0 196 37-253 18-230 (330)
22 2pm7_B Protein transport prote 99.9 2.2E-25 7.6E-30 196.7 20.2 202 36-253 12-238 (297)
23 1erj_A Transcriptional repress 99.9 1.2E-24 4E-29 199.7 25.8 211 37-253 127-389 (393)
24 3iz6_a 40S ribosomal protein R 99.9 2.1E-25 7.2E-30 203.8 20.5 202 38-254 162-376 (380)
25 4g56_B MGC81050 protein; prote 99.9 2.2E-25 7.6E-30 201.9 20.1 200 37-257 143-347 (357)
26 2pm7_B Protein transport prote 99.9 3.3E-25 1.1E-29 195.5 18.3 202 37-252 57-284 (297)
27 2xzm_R RACK1; ribosome, transl 99.9 4.4E-24 1.5E-28 192.3 25.7 210 37-253 80-340 (343)
28 1nr0_A Actin interacting prote 99.9 2.7E-24 9.2E-29 208.6 25.8 155 36-194 150-354 (611)
29 3iz6_a 40S ribosomal protein R 99.9 9.1E-25 3.1E-29 199.6 21.1 203 37-253 70-329 (380)
30 4ery_A WD repeat-containing pr 99.9 8.4E-24 2.9E-28 187.7 25.6 199 37-254 69-269 (312)
31 2aq5_A Coronin-1A; WD40 repeat 99.9 2.3E-24 7.7E-29 198.4 19.8 199 39-254 40-255 (402)
32 3dm0_A Maltose-binding peripla 99.9 8.5E-24 2.9E-28 208.2 24.2 200 37-254 386-593 (694)
33 2ynn_A Coatomer subunit beta'; 99.9 1E-23 3.5E-28 186.6 22.1 164 37-213 101-267 (304)
34 3ei3_B DNA damage-binding prot 99.9 2.6E-23 8.9E-28 189.9 25.2 213 36-253 121-382 (383)
35 3dm0_A Maltose-binding peripla 99.9 1.3E-23 4.4E-28 206.9 24.7 152 37-193 434-590 (694)
36 3vl1_A 26S proteasome regulato 99.9 4.2E-24 1.4E-28 197.4 19.6 195 41-255 105-324 (420)
37 1erj_A Transcriptional repress 99.9 3.2E-23 1.1E-27 190.2 24.5 202 36-254 67-288 (393)
38 3bg1_A Protein SEC13 homolog; 99.9 9.7E-25 3.3E-29 194.3 13.7 201 36-253 16-247 (316)
39 4e54_B DNA damage-binding prot 99.9 4.1E-24 1.4E-28 198.8 18.5 202 37-254 123-328 (435)
40 4g56_B MGC81050 protein; prote 99.9 1.4E-23 4.7E-28 190.0 21.1 216 35-254 44-302 (357)
41 2ymu_A WD-40 repeat protein; u 99.9 2.3E-23 7.7E-28 200.5 23.6 189 37-250 389-577 (577)
42 3dwl_C Actin-related protein 2 99.9 1.1E-24 3.8E-29 198.4 12.9 209 36-254 14-237 (377)
43 4e54_B DNA damage-binding prot 99.9 9.9E-24 3.4E-28 196.2 17.8 156 36-194 167-326 (435)
44 3jrp_A Fusion protein of prote 99.9 2.6E-23 9E-28 188.9 20.0 206 36-254 14-241 (379)
45 3bg1_A Protein SEC13 homolog; 99.9 4.6E-24 1.6E-28 189.9 14.4 204 37-252 61-292 (316)
46 3f3f_A Nucleoporin SEH1; struc 99.9 5.3E-23 1.8E-27 184.3 21.5 206 36-253 14-337 (351)
47 3ei3_B DNA damage-binding prot 99.9 9.1E-23 3.1E-27 186.3 22.8 197 37-254 77-283 (383)
48 3k26_A Polycomb protein EED; W 99.9 3.1E-22 1.1E-26 180.9 26.0 218 35-254 20-319 (366)
49 2aq5_A Coronin-1A; WD40 repeat 99.9 2.4E-23 8.4E-28 191.5 18.4 201 36-254 84-300 (402)
50 2j04_B YDR362CP, TAU91; beta p 99.9 8.9E-24 3E-28 199.9 15.2 198 37-253 211-428 (524)
51 1gxr_A ESG1, transducin-like e 99.9 5.6E-22 1.9E-26 177.2 24.9 198 36-254 100-297 (337)
52 3vl1_A 26S proteasome regulato 99.9 8.2E-23 2.8E-27 188.8 19.9 200 39-254 62-279 (420)
53 4h5i_A Guanine nucleotide-exch 99.9 1.3E-22 4.3E-27 184.3 20.5 196 38-254 138-344 (365)
54 3mmy_A MRNA export factor; mRN 99.9 3.5E-22 1.2E-26 180.6 22.8 197 34-249 40-342 (368)
55 3k26_A Polycomb protein EED; W 99.9 1.4E-22 4.9E-27 183.1 20.3 210 37-252 73-365 (366)
56 1gxr_A ESG1, transducin-like e 99.9 8E-22 2.7E-26 176.2 24.8 198 36-254 54-256 (337)
57 2w18_A PALB2, fancn, partner a 99.9 1.9E-22 6.6E-27 176.4 19.6 188 46-251 145-355 (356)
58 4gq1_A NUP37; propeller, trans 99.9 9.2E-23 3.2E-27 187.1 18.1 148 43-192 98-283 (393)
59 2j04_B YDR362CP, TAU91; beta p 99.9 2.2E-23 7.4E-28 197.3 13.9 153 37-193 270-426 (524)
60 2ymu_A WD-40 repeat protein; u 99.9 6.7E-22 2.3E-26 190.3 24.4 191 37-252 348-538 (577)
61 4gga_A P55CDC, cell division c 99.9 7.8E-22 2.7E-26 182.5 23.4 141 47-192 117-258 (420)
62 3mkq_A Coatomer beta'-subunit; 99.9 7.3E-22 2.5E-26 197.7 24.8 213 36-253 16-259 (814)
63 1k8k_C P40, ARP2/3 complex 41 99.9 2.3E-22 7.9E-27 182.4 19.3 211 35-254 10-234 (372)
64 3jrp_A Fusion protein of prote 99.9 1.7E-22 5.8E-27 183.6 18.1 203 37-253 59-287 (379)
65 3zwl_B Eukaryotic translation 99.9 1.6E-21 5.6E-26 176.3 24.5 212 36-253 35-346 (369)
66 2pm9_A Protein WEB1, protein t 99.9 1.2E-22 4.2E-27 187.2 17.0 216 36-254 168-415 (416)
67 3lrv_A PRE-mRNA-splicing facto 99.9 1.5E-22 5.2E-27 182.1 17.1 190 49-253 88-292 (343)
68 3dwl_C Actin-related protein 2 99.9 5.4E-23 1.9E-27 187.2 14.1 197 36-252 58-280 (377)
69 4aez_A CDC20, WD repeat-contai 99.9 3.6E-21 1.2E-25 177.0 25.4 213 36-255 137-382 (401)
70 3sfz_A APAF-1, apoptotic pepti 99.9 2.3E-21 7.8E-26 202.8 26.8 152 37-193 619-772 (1249)
71 1sq9_A Antiviral protein SKI8; 99.9 6.5E-22 2.2E-26 181.2 19.7 204 36-253 124-395 (397)
72 3dw8_B Serine/threonine-protei 99.9 4.2E-22 1.4E-26 185.4 17.4 207 34-253 29-315 (447)
73 1k8k_C P40, ARP2/3 complex 41 99.9 1.4E-21 4.7E-26 177.3 20.2 197 37-253 56-274 (372)
74 3jro_A Fusion protein of prote 99.9 5.3E-22 1.8E-26 196.9 18.6 202 36-254 12-239 (753)
75 2w18_A PALB2, fancn, partner a 99.9 2.4E-21 8.3E-26 169.4 20.1 143 44-192 191-354 (356)
76 3gre_A Serine/threonine-protei 99.9 1.2E-21 4.2E-26 182.0 19.4 203 36-254 66-293 (437)
77 2pm9_A Protein WEB1, protein t 99.9 8.5E-22 2.9E-26 181.5 17.7 202 36-254 116-338 (416)
78 4a11_B DNA excision repair pro 99.9 8E-21 2.7E-25 174.2 23.9 218 35-255 101-367 (408)
79 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.3E-21 4.6E-26 182.6 18.7 203 36-251 105-337 (450)
80 2xyi_A Probable histone-bindin 99.9 3E-21 1E-25 179.2 20.9 201 36-253 184-410 (430)
81 3dw8_B Serine/threonine-protei 99.9 9.6E-22 3.3E-26 183.0 17.5 204 36-254 96-374 (447)
82 3jro_A Fusion protein of prote 99.9 1.1E-21 3.9E-26 194.5 18.9 205 37-252 57-284 (753)
83 3v7d_B Cell division control p 99.9 1.3E-20 4.3E-25 176.6 24.9 194 37-254 166-382 (464)
84 4ggc_A P55CDC, cell division c 99.9 3.8E-20 1.3E-24 164.0 26.7 148 39-193 31-179 (318)
85 3i2n_A WD repeat-containing pr 99.9 2E-21 6.8E-26 175.1 18.6 202 35-254 20-244 (357)
86 4aow_A Guanine nucleotide-bind 99.9 6.6E-21 2.3E-25 170.6 21.8 185 69-254 29-247 (340)
87 3v7d_B Cell division control p 99.9 5.6E-21 1.9E-25 178.9 22.3 186 46-254 132-342 (464)
88 1sq9_A Antiviral protein SKI8; 99.9 1.5E-21 5.2E-26 178.8 17.8 198 37-254 20-268 (397)
89 4h5i_A Guanine nucleotide-exch 99.9 8.6E-21 2.9E-25 172.2 22.4 153 36-192 179-340 (365)
90 1r5m_A SIR4-interacting protei 99.9 1.8E-21 6E-26 179.5 18.2 195 37-252 210-424 (425)
91 2xyi_A Probable histone-bindin 99.9 1.8E-21 6.2E-26 180.7 18.3 200 37-253 132-353 (430)
92 1r5m_A SIR4-interacting protei 99.9 1.3E-20 4.6E-25 173.6 23.9 198 35-255 110-363 (425)
93 4aez_A CDC20, WD repeat-contai 99.9 1.2E-20 4.3E-25 173.4 23.2 200 48-253 105-336 (401)
94 2j04_A TAU60, YPL007P, hypothe 99.9 5.9E-21 2E-25 177.5 20.6 186 34-250 86-294 (588)
95 3gre_A Serine/threonine-protei 99.9 8.9E-21 3E-25 176.2 21.9 207 36-254 114-360 (437)
96 2oaj_A Protein SNI1; WD40 repe 99.9 3E-21 1E-25 194.5 20.0 200 36-254 20-243 (902)
97 2oaj_A Protein SNI1; WD40 repe 99.9 6.4E-21 2.2E-25 192.1 20.8 148 41-192 443-658 (902)
98 3odt_A Protein DOA1; ubiquitin 99.9 2.5E-20 8.6E-25 164.7 22.3 182 46-254 114-297 (313)
99 3vu4_A KMHSV2; beta-propeller 99.9 9.8E-21 3.4E-25 171.2 19.6 210 42-254 67-337 (355)
100 3f3f_A Nucleoporin SEH1; struc 99.9 2E-20 6.9E-25 167.4 21.0 154 36-191 60-333 (351)
101 3i2n_A WD repeat-containing pr 99.9 4.7E-21 1.6E-25 172.7 16.6 204 36-254 68-292 (357)
102 3odt_A Protein DOA1; ubiquitin 99.9 8.8E-20 3E-24 161.2 23.0 207 37-254 22-256 (313)
103 4a11_B DNA excision repair pro 99.9 6.8E-20 2.3E-24 168.0 21.6 216 35-254 45-277 (408)
104 3lrv_A PRE-mRNA-splicing facto 99.9 1.3E-20 4.4E-25 169.5 16.2 152 36-192 128-289 (343)
105 1pgu_A Actin interacting prote 99.9 4.8E-20 1.6E-24 178.4 21.3 198 36-253 67-283 (615)
106 3zwl_B Eukaryotic translation 99.8 1E-19 3.6E-24 164.4 21.5 182 69-253 23-249 (369)
107 3sfz_A APAF-1, apoptotic pepti 99.8 1.3E-19 4.6E-24 189.4 24.7 151 38-192 704-910 (1249)
108 2ovr_B FBW7, F-BOX/WD repeat p 99.8 1.3E-19 4.6E-24 168.7 21.6 137 46-192 129-265 (445)
109 2ovr_B FBW7, F-BOX/WD repeat p 99.8 1.7E-19 5.7E-24 168.1 22.0 189 46-255 249-444 (445)
110 2j04_A TAU60, YPL007P, hypothe 99.8 1.3E-20 4.3E-25 175.3 13.7 192 34-254 16-255 (588)
111 1p22_A F-BOX/WD-repeat protein 99.8 1.5E-19 5E-24 168.0 20.9 180 46-253 143-325 (435)
112 3mmy_A MRNA export factor; mRN 99.8 1.6E-19 5.5E-24 163.1 19.8 126 68-194 29-159 (368)
113 1pgu_A Actin interacting prote 99.8 1.1E-19 3.7E-24 175.9 19.6 202 34-254 19-239 (615)
114 1yfq_A Cell cycle arrest prote 99.8 4.2E-20 1.5E-24 165.5 14.3 199 35-254 13-226 (342)
115 2vdu_B TRNA (guanine-N(7)-)-me 99.8 1.1E-18 3.6E-23 163.0 23.9 153 36-192 152-336 (450)
116 1p22_A F-BOX/WD-repeat protein 99.8 3.6E-19 1.2E-23 165.3 20.0 179 46-252 183-364 (435)
117 1yfq_A Cell cycle arrest prote 99.8 9.6E-20 3.3E-24 163.2 15.6 199 36-254 59-283 (342)
118 3mkq_A Coatomer beta'-subunit; 99.8 3E-19 1E-23 178.7 19.6 166 70-253 5-172 (814)
119 4gga_A P55CDC, cell division c 99.8 6.7E-18 2.3E-22 156.1 24.0 152 37-191 234-391 (420)
120 3vu4_A KMHSV2; beta-propeller 99.8 1.6E-18 5.4E-23 156.7 19.0 199 34-254 20-272 (355)
121 4gq1_A NUP37; propeller, trans 99.8 5.2E-19 1.8E-23 162.1 14.1 211 34-255 16-288 (393)
122 1l0q_A Surface layer protein; 99.8 2.6E-17 8.7E-22 150.4 23.6 185 47-254 3-190 (391)
123 4ggc_A P55CDC, cell division c 99.8 2.7E-17 9.1E-22 145.6 22.5 151 39-191 156-311 (318)
124 1l0q_A Surface layer protein; 99.8 3.8E-17 1.3E-21 149.2 23.8 195 36-253 34-233 (391)
125 3bws_A Protein LP49; two-domai 99.8 1.7E-17 5.7E-22 153.8 21.5 195 36-253 125-334 (433)
126 2oit_A Nucleoporin 214KDA; NH2 99.8 2.3E-17 7.8E-22 152.9 17.4 151 38-192 41-220 (434)
127 2oit_A Nucleoporin 214KDA; NH2 99.7 1E-16 3.6E-21 148.4 19.6 144 36-182 95-258 (434)
128 3bws_A Protein LP49; two-domai 99.7 3E-16 1E-20 145.3 22.4 183 37-242 173-364 (433)
129 2hqs_A Protein TOLB; TOLB, PAL 99.7 4.9E-16 1.7E-20 143.3 19.1 176 56-253 159-344 (415)
130 2hqs_A Protein TOLB; TOLB, PAL 99.7 3.6E-15 1.2E-19 137.5 21.2 191 36-252 181-386 (415)
131 3d2f_A Heat shock protein homo 99.6 2E-18 6.7E-23 166.6 -5.0 295 2-357 55-360 (675)
132 3vgz_A Uncharacterized protein 99.6 8.8E-14 3E-18 124.8 22.1 198 35-253 90-303 (353)
133 1yuw_A Heat shock cognate 71 k 99.6 1.1E-17 3.6E-22 158.8 -4.2 289 2-356 57-355 (554)
134 4b9q_A Chaperone protein DNAK; 99.6 1.3E-17 4.5E-22 159.7 -6.3 290 2-357 56-359 (605)
135 3u4y_A Uncharacterized protein 99.6 1.2E-13 4.1E-18 122.9 19.8 195 42-253 6-207 (331)
136 3vgz_A Uncharacterized protein 99.6 1.4E-13 5E-18 123.4 20.2 204 34-253 41-262 (353)
137 1nir_A Nitrite reductase; hemo 99.6 1.4E-13 4.6E-18 131.1 20.2 186 46-254 149-356 (543)
138 1pby_B Quinohemoprotein amine 99.6 2.1E-13 7.2E-18 121.3 19.7 192 36-253 36-310 (337)
139 2kho_A Heat shock protein 70; 99.6 2.5E-17 8.4E-22 157.8 -6.9 290 2-357 56-359 (605)
140 1xfd_A DIP, dipeptidyl aminope 99.5 3.1E-14 1.1E-18 140.5 12.6 142 36-185 19-193 (723)
141 1nir_A Nitrite reductase; hemo 99.5 6.9E-14 2.4E-18 133.1 14.2 206 35-253 281-514 (543)
142 1ri6_A Putative isomerase YBHE 99.5 1.2E-13 3.9E-18 123.3 14.6 190 47-252 6-208 (343)
143 2ojh_A Uncharacterized protein 99.5 1.2E-13 3.9E-18 120.4 14.0 179 51-252 17-203 (297)
144 2ecf_A Dipeptidyl peptidase IV 99.5 7.4E-14 2.5E-18 138.3 14.0 148 34-186 37-230 (741)
145 1ri6_A Putative isomerase YBHE 99.5 4.5E-13 1.5E-17 119.5 17.7 203 35-252 39-261 (343)
146 3u4y_A Uncharacterized protein 99.5 1.5E-12 5.1E-17 115.8 20.1 195 38-253 44-252 (331)
147 3hfq_A Uncharacterized protein 99.5 1.9E-12 6.5E-17 116.1 20.5 207 35-252 41-270 (347)
148 2z3z_A Dipeptidyl aminopeptida 99.5 2.4E-13 8.3E-18 133.9 15.8 195 36-251 84-340 (706)
149 2ojh_A Uncharacterized protein 99.5 9.4E-13 3.2E-17 114.5 17.3 186 37-243 88-292 (297)
150 1xfd_A DIP, dipeptidyl aminope 99.5 7E-13 2.4E-17 130.9 16.5 190 36-240 63-323 (723)
151 1pby_B Quinohemoprotein amine 99.5 2.5E-12 8.7E-17 114.3 18.0 172 47-241 2-192 (337)
152 2ecf_A Dipeptidyl peptidase IV 99.4 1.2E-12 4E-17 129.7 16.0 198 36-251 111-365 (741)
153 1k32_A Tricorn protease; prote 99.4 2.3E-12 7.8E-17 132.4 18.4 184 36-245 298-494 (1045)
154 1jmx_B Amine dehydrogenase; ox 99.4 4E-12 1.4E-16 113.7 15.9 192 35-253 44-325 (349)
155 1jmx_B Amine dehydrogenase; ox 99.4 5.6E-12 1.9E-16 112.7 16.8 141 45-192 10-172 (349)
156 3o4h_A Acylamino-acid-releasin 99.4 6.1E-12 2.1E-16 121.1 17.5 188 37-251 68-274 (582)
157 3o4h_A Acylamino-acid-releasin 99.4 2.7E-12 9.3E-17 123.5 14.2 142 41-192 117-273 (582)
158 3scy_A Hypothetical bacterial 99.4 8.4E-11 2.9E-15 105.9 22.4 164 35-209 156-343 (361)
159 3scy_A Hypothetical bacterial 99.4 4.6E-11 1.6E-15 107.6 20.5 197 35-249 101-333 (361)
160 1z68_A Fibroblast activation p 99.4 1.6E-12 5.4E-17 128.3 10.5 142 36-185 18-189 (719)
161 3hfq_A Uncharacterized protein 99.4 1.4E-10 4.8E-15 103.8 22.3 155 36-192 143-314 (347)
162 1k32_A Tricorn protease; prote 99.3 2.3E-11 8E-16 124.9 18.4 147 38-192 342-499 (1045)
163 2z3z_A Dipeptidyl aminopeptida 99.3 1.2E-11 4.1E-16 121.8 15.2 183 54-254 233-436 (706)
164 3i33_A Heat shock-related 70 k 99.3 2.3E-14 7.8E-19 131.5 -4.2 110 244-356 267-376 (404)
165 1jof_A Carboxy-CIS,CIS-muconat 99.3 3.7E-11 1.3E-15 108.6 16.4 205 35-252 41-290 (365)
166 3qfu_A 78 kDa glucose-regulate 99.3 3.8E-14 1.3E-18 129.7 -4.7 110 244-356 259-368 (394)
167 3no2_A Uncharacterized protein 99.3 1.3E-10 4.6E-15 100.5 17.1 181 46-252 5-194 (276)
168 1jof_A Carboxy-CIS,CIS-muconat 99.3 3.6E-10 1.2E-14 102.1 19.9 201 36-252 85-340 (365)
169 3azo_A Aminopeptidase; POP fam 99.3 9.1E-11 3.1E-15 114.6 16.6 194 43-249 88-319 (662)
170 3fvz_A Peptidyl-glycine alpha- 99.2 4.6E-10 1.6E-14 99.9 17.7 206 35-252 92-321 (329)
171 1z68_A Fibroblast activation p 99.2 4.9E-11 1.7E-15 117.7 10.9 141 36-183 62-271 (719)
172 1q7f_A NHL, brain tumor CG1071 99.2 5E-09 1.7E-13 90.9 22.5 195 35-252 78-279 (286)
173 4a5s_A Dipeptidyl peptidase 4 99.2 1.4E-10 4.7E-15 114.8 13.3 147 36-191 19-198 (740)
174 1xip_A Nucleoporin NUP159; bet 99.2 6E-10 2E-14 100.2 15.3 141 35-192 39-188 (388)
175 1q7f_A NHL, brain tumor CG1071 99.2 1.8E-09 6.3E-14 93.7 17.9 196 34-252 30-237 (286)
176 4a5s_A Dipeptidyl peptidase 4 99.1 1.7E-10 5.8E-15 114.2 11.2 149 80-244 18-192 (740)
177 3pe7_A Oligogalacturonate lyas 99.1 8.5E-10 2.9E-14 100.1 14.8 201 39-253 41-273 (388)
178 3fvz_A Peptidyl-glycine alpha- 99.1 5.3E-09 1.8E-13 92.9 18.5 152 35-191 144-318 (329)
179 3no2_A Uncharacterized protein 99.1 1.3E-08 4.5E-13 88.0 19.2 184 36-241 39-231 (276)
180 1xip_A Nucleoporin NUP159; bet 99.0 6.2E-09 2.1E-13 93.6 16.1 131 36-182 90-231 (388)
181 3azo_A Aminopeptidase; POP fam 99.0 3.5E-09 1.2E-13 103.3 15.2 152 37-192 133-320 (662)
182 1dkg_D Molecular chaperone DNA 99.0 3.8E-12 1.3E-16 115.8 -6.1 108 247-357 248-359 (383)
183 3e5z_A Putative gluconolactona 99.0 3.6E-08 1.2E-12 86.0 18.7 192 35-252 29-245 (296)
184 1rwi_B Serine/threonine-protei 99.0 3E-08 1E-12 85.1 17.5 197 35-254 68-265 (270)
185 3pe7_A Oligogalacturonate lyas 98.9 3.6E-08 1.2E-12 89.3 17.5 166 68-242 20-208 (388)
186 3dsm_A Uncharacterized protein 98.9 9.4E-08 3.2E-12 84.8 19.3 192 36-253 46-253 (328)
187 1rwi_B Serine/threonine-protei 98.9 3.9E-08 1.3E-12 84.3 16.0 196 35-252 25-221 (270)
188 2dg1_A DRP35, lactonase; beta 98.9 3.6E-08 1.2E-12 87.5 16.1 176 53-252 24-212 (333)
189 2gop_A Trilobed protease; beta 98.9 8.3E-08 2.8E-12 85.5 18.0 117 55-185 42-190 (347)
190 2dg1_A DRP35, lactonase; beta 98.9 2.7E-07 9.3E-12 81.7 21.0 151 36-192 47-210 (333)
191 2oiz_A Aromatic amine dehydrog 98.9 3E-07 1E-11 82.7 20.4 89 128-235 259-360 (361)
192 3c5m_A Oligogalacturonate lyas 98.8 2.2E-09 7.4E-14 97.6 5.3 201 38-253 40-273 (396)
193 2oiz_A Aromatic amine dehydrog 98.8 4.8E-08 1.6E-12 87.9 13.1 131 54-192 29-179 (361)
194 1qks_A Cytochrome CD1 nitrite 98.8 6.5E-07 2.2E-11 85.2 21.3 186 46-254 167-374 (567)
195 4gni_A Putative heat shock pro 98.8 3.2E-09 1.1E-13 97.3 5.1 106 249-357 265-370 (409)
196 2z2n_A Virginiamycin B lyase; 98.8 2E-06 6.7E-11 74.6 22.5 195 34-251 15-211 (299)
197 2bkl_A Prolyl endopeptidase; m 98.7 1.9E-07 6.6E-12 91.6 16.1 107 76-186 118-248 (695)
198 2xdw_A Prolyl endopeptidase; a 98.7 4.6E-07 1.6E-11 89.2 18.6 141 38-184 129-305 (710)
199 3e5z_A Putative gluconolactona 98.7 7.5E-07 2.6E-11 77.5 17.7 144 36-190 117-282 (296)
200 2v7y_A Chaperone protein DNAK; 98.7 9.4E-09 3.2E-13 96.6 5.2 110 245-357 215-328 (509)
201 2z2n_A Virginiamycin B lyase; 98.7 6.9E-06 2.4E-10 71.1 22.7 150 34-190 57-208 (299)
202 3c5m_A Oligogalacturonate lyas 98.7 4.4E-07 1.5E-11 82.2 15.4 124 53-184 165-302 (396)
203 2xdw_A Prolyl endopeptidase; a 98.7 2.3E-06 7.8E-11 84.2 21.6 161 37-209 174-372 (710)
204 2gop_A Trilobed protease; beta 98.6 9.4E-07 3.2E-11 78.6 16.3 137 36-185 61-235 (347)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 3.5E-06 1.2E-10 73.7 19.7 150 35-190 118-294 (314)
206 2hz6_A Endoplasmic reticulum t 98.6 3.2E-09 1.1E-13 95.9 -0.3 146 47-213 10-157 (369)
207 2qc5_A Streptogramin B lactona 98.6 1.4E-05 4.8E-10 69.1 23.0 150 34-190 20-171 (300)
208 3dsm_A Uncharacterized protein 98.6 1.7E-06 5.9E-11 76.6 17.0 159 35-213 132-309 (328)
209 3hrp_A Uncharacterized protein 98.6 2.1E-06 7.1E-11 78.5 17.4 201 34-251 131-352 (409)
210 2qc5_A Streptogramin B lactona 98.6 2.7E-05 9.3E-10 67.3 23.3 150 34-190 62-213 (300)
211 2bkl_A Prolyl endopeptidase; m 98.5 2.5E-06 8.7E-11 83.6 17.4 150 37-192 171-346 (695)
212 3sjl_D Methylamine dehydrogena 98.5 4.5E-06 1.5E-10 74.8 17.4 148 35-190 34-203 (386)
213 1qks_A Cytochrome CD1 nitrite 98.5 5.4E-05 1.9E-09 72.0 24.3 165 35-212 198-380 (567)
214 3g4e_A Regucalcin; six bladed 98.5 2.3E-05 7.8E-10 68.2 20.2 192 38-252 17-228 (297)
215 3hrp_A Uncharacterized protein 98.4 2.3E-05 7.8E-10 71.6 19.6 147 39-190 176-349 (409)
216 3g4e_A Regucalcin; six bladed 98.4 3.3E-05 1.1E-09 67.2 19.5 145 35-184 99-261 (297)
217 1yr2_A Prolyl oligopeptidase; 98.4 1.7E-05 5.8E-10 78.4 19.2 149 38-192 213-390 (741)
218 2ece_A 462AA long hypothetical 98.4 5.1E-05 1.8E-09 68.8 20.3 147 43-192 93-286 (462)
219 2qe8_A Uncharacterized protein 98.4 2.3E-05 7.7E-10 69.8 17.8 193 34-245 67-313 (343)
220 1pjx_A Dfpase, DIISOPROPYLFLUO 98.3 2.8E-05 9.5E-10 67.9 17.4 196 35-252 19-255 (314)
221 3nok_A Glutaminyl cyclase; bet 98.3 6.1E-05 2.1E-09 63.3 17.7 178 46-242 65-254 (268)
222 2ece_A 462AA long hypothetical 98.3 0.00016 5.4E-09 65.6 21.6 192 34-241 138-399 (462)
223 1yr2_A Prolyl oligopeptidase; 98.3 1.9E-05 6.6E-10 78.0 16.7 149 37-192 166-347 (741)
224 3dr2_A Exported gluconolactona 98.3 8.1E-05 2.8E-09 64.9 19.0 144 38-190 49-219 (305)
225 2mad_H Methylamine dehydrogena 98.3 0.00011 3.8E-09 66.1 20.2 123 57-190 48-191 (373)
226 2hz6_A Endoplasmic reticulum t 98.3 6.5E-08 2.2E-12 87.3 -1.2 138 94-253 11-149 (369)
227 3sjl_D Methylamine dehydrogena 98.3 1.9E-05 6.4E-10 70.8 14.4 144 86-242 40-207 (386)
228 2ghs_A AGR_C_1268P; regucalcin 98.3 8.3E-05 2.8E-09 65.6 18.5 145 36-191 51-206 (326)
229 3c75_H MADH, methylamine dehyd 98.2 3.9E-05 1.3E-09 69.9 16.0 139 43-190 82-243 (426)
230 2ghs_A AGR_C_1268P; regucalcin 98.2 0.00027 9.1E-09 62.3 21.0 143 35-184 135-291 (326)
231 2iwa_A Glutamine cyclotransfer 98.2 0.0002 7E-09 60.6 19.2 197 37-251 24-235 (266)
232 1yuw_A Heat shock cognate 71 k 98.2 2.2E-06 7.5E-11 81.3 7.7 75 306-380 261-335 (554)
233 3nol_A Glutamine cyclotransfer 98.2 0.00017 5.9E-09 60.5 18.2 178 47-242 54-244 (262)
234 3d2f_A Heat shock protein homo 98.2 1.3E-06 4.6E-11 84.4 6.1 75 306-380 265-339 (675)
235 4gni_A Putative heat shock pro 98.1 4.3E-06 1.5E-10 76.4 8.0 75 306-380 275-349 (409)
236 4b9q_A Chaperone protein DNAK; 98.1 4.3E-06 1.5E-10 80.1 8.0 76 305-380 259-338 (605)
237 1kb0_A Quinohemoprotein alcoho 98.1 0.00024 8.2E-09 69.2 18.8 146 57-215 284-517 (677)
238 2mad_H Methylamine dehydrogena 98.1 0.00018 6.3E-09 64.6 16.8 96 103-211 48-162 (373)
239 3dr2_A Exported gluconolactona 98.0 0.00028 9.6E-09 61.4 17.4 182 35-242 87-296 (305)
240 1yiq_A Quinohemoprotein alcoho 98.0 0.00035 1.2E-08 68.2 19.6 146 57-215 276-515 (689)
241 3mbr_X Glutamine cyclotransfer 98.0 0.0017 5.8E-08 53.9 20.4 179 46-242 31-223 (243)
242 3i33_A Heat shock-related 70 k 98.0 1.4E-05 4.6E-10 73.0 7.6 75 306-380 282-356 (404)
243 3q7m_A Lipoprotein YFGL, BAMB; 98.0 0.00045 1.6E-08 62.0 17.5 149 48-215 55-217 (376)
244 3c75_H MADH, methylamine dehyd 98.0 0.00014 4.8E-09 66.3 13.9 128 102-241 99-246 (426)
245 1yiq_A Quinohemoprotein alcoho 97.9 0.00051 1.8E-08 67.0 17.8 131 83-215 239-474 (689)
246 2qe8_A Uncharacterized protein 97.9 0.0009 3.1E-08 59.3 17.8 202 34-251 17-276 (343)
247 3iuj_A Prolyl endopeptidase; h 97.9 7.7E-05 2.6E-09 73.0 11.7 112 76-192 126-265 (693)
248 2v7y_A Chaperone protein DNAK; 97.9 1.7E-05 6E-10 74.4 6.7 75 306-380 229-307 (509)
249 2kho_A Heat shock protein 70; 97.9 4.9E-06 1.7E-10 79.7 2.8 75 306-380 260-338 (605)
250 3qfu_A 78 kDa glucose-regulate 97.9 3.3E-05 1.1E-09 70.2 8.1 75 306-380 274-348 (394)
251 1npe_A Nidogen, entactin; glyc 97.8 0.0091 3.1E-07 50.5 22.8 152 35-190 37-193 (267)
252 2iwa_A Glutamine cyclotransfer 97.8 0.0006 2.1E-08 57.7 13.6 164 70-253 11-181 (266)
253 1fwx_A Nitrous oxide reductase 97.8 0.00088 3E-08 62.9 15.9 88 103-192 255-358 (595)
254 3nok_A Glutaminyl cyclase; bet 97.7 0.00066 2.3E-08 57.0 13.4 165 69-254 44-211 (268)
255 3nol_A Glutamine cyclotransfer 97.7 0.00059 2E-08 57.3 13.1 164 70-253 33-201 (262)
256 3hxj_A Pyrrolo-quinoline quino 97.7 0.00054 1.8E-08 60.0 13.4 144 48-214 109-252 (330)
257 3iuj_A Prolyl endopeptidase; h 97.6 0.0037 1.3E-07 61.1 18.7 150 37-192 237-402 (693)
258 3q7m_A Lipoprotein YFGL, BAMB; 97.6 0.0025 8.5E-08 57.1 16.0 146 48-214 190-346 (376)
259 1dkg_D Molecular chaperone DNA 97.6 0.00014 4.9E-09 65.7 7.5 75 306-380 260-338 (383)
260 3mbr_X Glutamine cyclotransfer 97.5 0.0047 1.6E-07 51.3 15.7 165 69-253 10-179 (243)
261 1npe_A Nidogen, entactin; glyc 97.5 0.036 1.2E-06 46.7 24.5 164 34-212 79-245 (267)
262 1kb0_A Quinohemoprotein alcoho 97.5 0.0023 8E-08 62.3 15.3 151 48-213 130-354 (677)
263 1kv9_A Type II quinohemoprotei 97.3 0.0078 2.7E-07 58.5 16.4 146 57-215 271-498 (668)
264 1mda_H Methylamine dehydrogena 97.3 0.0018 6E-08 57.9 10.6 95 94-190 34-151 (368)
265 2ad6_A Methanol dehydrogenase 97.3 0.016 5.4E-07 55.1 17.8 111 94-215 318-504 (571)
266 3hxj_A Pyrrolo-quinoline quino 97.2 0.0056 1.9E-07 53.4 13.7 142 49-213 150-291 (330)
267 1mda_H Methylamine dehydrogena 97.2 0.001 3.5E-08 59.5 8.3 103 46-153 32-158 (368)
268 1fwx_A Nitrous oxide reductase 97.1 0.011 3.9E-07 55.5 14.8 194 44-252 100-360 (595)
269 1flg_A Protein (quinoprotein e 97.1 0.063 2.1E-06 51.1 20.2 62 143-215 465-526 (582)
270 1kv9_A Type II quinohemoprotei 97.0 0.018 6.2E-07 55.9 15.4 150 48-212 119-340 (668)
271 2p9w_A MAL S 1 allergenic prot 97.0 0.031 1.1E-06 48.5 15.1 165 75-252 9-214 (334)
272 3tc9_A Hypothetical hydrolase; 96.9 0.067 2.3E-06 48.8 18.1 151 35-191 138-297 (430)
273 1jce_A ROD shape-determining p 96.9 0.00037 1.3E-08 61.9 2.6 95 262-357 200-303 (344)
274 3v65_B Low-density lipoprotein 96.9 0.14 4.9E-06 45.9 19.5 152 36-190 118-272 (386)
275 3p5b_L Low density lipoprotein 96.9 0.24 8.3E-06 44.6 22.5 154 36-190 114-272 (400)
276 1w6s_A Methanol dehydrogenase 96.8 0.092 3.2E-06 50.1 18.7 62 143-215 452-513 (599)
277 3qqz_A Putative uncharacterize 96.8 0.17 5.9E-06 42.3 20.3 150 36-190 29-199 (255)
278 2fp8_A Strictosidine synthase; 96.8 0.2 6.9E-06 43.4 19.8 145 35-184 81-248 (322)
279 2fp8_A Strictosidine synthase; 96.7 0.093 3.2E-06 45.6 16.9 150 35-190 20-211 (322)
280 3v64_C Agrin; beta propeller, 96.7 0.27 9.3E-06 43.3 20.4 152 36-190 75-229 (349)
281 1ijq_A LDL receptor, low-densi 96.7 0.28 9.7E-06 42.5 22.1 154 35-190 31-190 (316)
282 3pbp_A Nucleoporin NUP82; beta 96.6 0.29 1E-05 43.9 18.9 141 44-190 31-207 (452)
283 1w6s_A Methanol dehydrogenase 96.6 0.08 2.7E-06 50.5 16.2 150 49-213 124-350 (599)
284 2xe4_A Oligopeptidase B; hydro 96.5 0.0078 2.7E-07 59.4 9.2 99 80-183 175-289 (751)
285 3m0c_C LDL receptor, low-densi 96.5 0.43 1.5E-05 47.1 21.3 154 36-190 426-584 (791)
286 3v65_B Low-density lipoprotein 96.5 0.43 1.5E-05 42.7 20.9 134 36-172 161-296 (386)
287 3p5b_L Low density lipoprotein 96.5 0.47 1.6E-05 42.7 20.3 131 48-183 85-220 (400)
288 2xe4_A Oligopeptidase B; hydro 96.5 0.042 1.4E-06 54.2 14.0 141 38-184 178-339 (751)
289 1ijq_A LDL receptor, low-densi 96.4 0.4 1.4E-05 41.5 20.4 124 56-183 10-138 (316)
290 2p9w_A MAL S 1 allergenic prot 96.4 0.31 1.1E-05 42.3 17.4 149 38-190 17-210 (334)
291 2ad6_A Methanol dehydrogenase 96.4 0.16 5.5E-06 48.2 17.2 154 48-214 117-344 (571)
292 3qqz_A Putative uncharacterize 96.2 0.31 1.1E-05 40.7 16.0 117 72-190 20-146 (255)
293 3tc9_A Hypothetical hydrolase; 96.2 0.64 2.2E-05 42.3 19.5 116 34-153 179-301 (430)
294 3v64_C Agrin; beta propeller, 96.1 0.63 2.2E-05 40.9 21.5 117 36-155 118-236 (349)
295 3amr_A 3-phytase; beta-propell 96.1 0.62 2.1E-05 40.8 19.9 134 48-188 42-203 (355)
296 1flg_A Protein (quinoprotein e 96.0 0.092 3.1E-06 50.0 13.4 77 100-177 464-541 (582)
297 3sov_A LRP-6, low-density lipo 96.0 0.68 2.3E-05 40.2 20.3 153 36-190 37-192 (318)
298 4hw6_A Hypothetical protein, I 96.0 0.61 2.1E-05 42.5 18.3 72 79-152 228-303 (433)
299 4a2l_A BT_4663, two-component 95.9 1.4 4.9E-05 43.5 22.1 148 36-189 312-475 (795)
300 4hw6_A Hypothetical protein, I 95.7 0.34 1.2E-05 44.2 15.4 150 34-190 139-299 (433)
301 4a2a_A Cell division protein F 95.6 0.0099 3.4E-07 54.0 4.7 94 262-357 253-354 (419)
302 3kya_A Putative phosphatase; s 95.6 1 3.5E-05 41.6 17.9 150 35-190 140-336 (496)
303 3m0c_C LDL receptor, low-densi 95.5 2.1 7.1E-05 42.2 21.4 124 56-183 404-532 (791)
304 1n7d_A LDL receptor, low-densi 95.2 0.054 1.8E-06 52.8 8.7 154 36-190 408-566 (699)
305 3amr_A 3-phytase; beta-propell 95.2 1.5 5.1E-05 38.4 18.6 136 55-192 98-260 (355)
306 3sov_A LRP-6, low-density lipo 95.0 1.6 5.5E-05 37.7 21.6 116 36-154 81-198 (318)
307 1k3i_A Galactose oxidase precu 94.6 0.44 1.5E-05 46.0 13.3 146 57-206 220-379 (656)
308 2p4o_A Hypothetical protein; p 94.4 2.1 7.1E-05 36.6 20.8 150 35-190 73-237 (306)
309 2p4o_A Hypothetical protein; p 94.4 2.1 7.2E-05 36.5 19.2 108 79-190 32-142 (306)
310 3v9f_A Two-component system se 94.4 4.2 0.00014 40.0 20.6 144 36-189 365-519 (781)
311 4a2l_A BT_4663, two-component 94.1 4.9 0.00017 39.6 22.1 145 36-190 359-522 (795)
312 1jce_A ROD shape-determining p 94.0 0.058 2E-06 47.6 5.1 63 310-372 201-271 (344)
313 1n7d_A LDL receptor, low-densi 93.9 0.34 1.1E-05 47.2 10.6 115 36-154 455-572 (699)
314 3v9f_A Two-component system se 93.8 4.1 0.00014 40.0 18.5 143 36-190 409-563 (781)
315 2ych_A Competence protein PILM 93.6 0.026 8.8E-07 50.6 2.1 93 263-356 239-331 (377)
316 2xzh_A Clathrin heavy chain 1; 93.6 3.3 0.00011 35.9 15.2 132 56-190 180-327 (365)
317 3s94_A LRP-6, low-density lipo 93.5 5.5 0.00019 38.0 21.2 146 35-182 41-188 (619)
318 1k3i_A Galactose oxidase precu 93.4 0.74 2.5E-05 44.4 12.1 121 83-212 190-328 (656)
319 1bpo_A Protein (clathrin); cla 92.0 6.9 0.00024 35.4 17.5 133 55-190 178-326 (494)
320 2ism_A Putative oxidoreductase 91.8 6.2 0.00021 34.5 16.4 100 78-182 30-152 (352)
321 2be1_A Serine/threonine-protei 91.7 1.2 4.1E-05 38.9 10.0 111 94-215 12-140 (339)
322 4a0p_A LRP6, LRP-6, low-densit 91.1 11 0.00038 36.0 21.5 144 35-182 38-183 (628)
323 4a2a_A Cell division protein F 90.8 0.53 1.8E-05 42.6 7.1 70 309-380 253-333 (419)
324 1tl2_A L10, protein (tachylect 90.7 2.4 8.1E-05 34.5 9.9 133 47-189 5-157 (236)
325 2ism_A Putative oxidoreductase 90.7 6.4 0.00022 34.4 14.0 103 34-141 31-153 (352)
326 3sre_A PON1, serum paraoxonase 90.2 9 0.00031 33.6 22.7 135 54-190 81-247 (355)
327 1cru_A Protein (soluble quinop 89.5 12 0.00042 34.0 17.3 107 34-142 27-163 (454)
328 2g8s_A Glucose/sorbosone dehyd 89.2 8.3 0.00028 33.7 13.4 107 34-142 18-149 (353)
329 2xbg_A YCF48-like protein; pho 88.7 11 0.00037 32.5 18.8 108 76-189 160-273 (327)
330 3a9g_A Putative uncharacterize 88.7 11 0.00038 32.9 13.9 101 78-182 28-152 (354)
331 3ii7_A Kelch-like protein 7; p 88.7 10 0.00035 32.0 15.1 105 47-157 57-182 (306)
332 2be1_A Serine/threonine-protei 88.5 12 0.0004 32.6 14.7 113 46-162 10-139 (339)
333 3a9g_A Putative uncharacterize 88.2 13 0.00043 32.6 14.8 103 34-141 29-153 (354)
334 3s94_A LRP-6, low-density lipo 87.7 19 0.00067 34.2 21.7 144 36-182 351-496 (619)
335 2xn4_A Kelch-like protein 2; s 86.5 14 0.00046 31.1 14.7 54 102-157 173-233 (302)
336 3pbp_A Nucleoporin NUP82; beta 85.6 13 0.00046 33.4 12.3 91 101-192 40-155 (452)
337 1zgk_A Kelch-like ECH-associat 85.6 15 0.00053 31.0 13.2 62 94-157 171-244 (308)
338 2vpj_A Kelch-like protein 12; 85.5 15 0.00052 30.8 15.5 96 57-158 129-236 (301)
339 3sre_A PON1, serum paraoxonase 84.6 20 0.00068 31.4 19.2 123 55-183 138-285 (355)
340 4asc_A Kelch repeat and BTB do 83.8 19 0.00065 30.5 14.0 63 94-158 151-226 (315)
341 3kya_A Putative phosphatase; s 83.8 27 0.00091 32.2 18.6 74 34-109 247-339 (496)
342 2xn4_A Kelch-like protein 2; s 83.0 20 0.00068 30.1 16.2 106 47-158 63-187 (302)
343 2xbg_A YCF48-like protein; pho 82.2 23 0.00079 30.3 20.2 108 78-190 121-229 (327)
344 4a0p_A LRP6, LRP-6, low-densit 81.3 38 0.0013 32.3 22.9 151 36-190 342-503 (628)
345 2ych_A Competence protein PILM 80.3 1.1 3.8E-05 39.8 3.4 41 340-380 269-311 (377)
346 3das_A Putative oxidoreductase 80.0 30 0.001 30.2 16.1 107 34-141 32-158 (347)
347 3ii7_A Kelch-like protein 7; p 79.2 27 0.00093 29.3 16.9 98 55-158 23-132 (306)
348 3h1q_A Ethanolamine utilizatio 79.0 1.8 6.3E-05 36.3 4.2 55 296-357 198-252 (272)
349 4gq2_M Nucleoporin NUP120; bet 78.7 32 0.0011 34.7 13.7 37 80-118 237-273 (950)
350 2vpj_A Kelch-like protein 12; 78.6 28 0.00096 29.1 17.4 106 47-158 64-189 (301)
351 1xi4_A Clathrin heavy chain; a 78.3 13 0.00043 39.2 10.4 134 54-190 177-326 (1630)
352 2g8s_A Glucose/sorbosone dehyd 77.4 35 0.0012 29.6 13.2 101 79-182 18-147 (353)
353 1cru_A Protein (soluble quinop 77.3 42 0.0014 30.4 15.0 105 78-184 26-163 (454)
354 1zgk_A Kelch-like ECH-associat 73.8 39 0.0013 28.4 13.9 62 94-157 124-197 (308)
355 3das_A Putative oxidoreductase 73.2 46 0.0016 28.9 15.3 109 73-183 26-158 (347)
356 1tl2_A L10, protein (tachylect 72.7 37 0.0013 27.6 13.7 140 38-189 45-204 (236)
357 4asc_A Kelch repeat and BTB do 70.6 47 0.0016 27.9 14.8 54 102-157 117-178 (315)
358 3ei3_A DNA damage-binding prot 70.4 1E+02 0.0036 31.8 19.4 140 45-192 843-996 (1158)
359 1k8k_A ARP3, actin-like protei 68.8 2.3 8E-05 38.3 2.4 81 278-359 254-343 (418)
360 2woz_A Kelch repeat and BTB do 68.2 54 0.0018 27.6 13.6 61 94-156 161-234 (318)
361 1xi4_A Clathrin heavy chain; a 67.8 52 0.0018 34.8 11.9 225 3-246 70-334 (1630)
362 4gq2_M Nucleoporin NUP120; bet 65.4 12 0.00041 37.8 7.0 38 124-161 237-274 (950)
363 3sbq_A Nitrous-oxide reductase 64.5 32 0.0011 32.2 8.9 67 125-192 325-405 (638)
364 3sbq_A Nitrous-oxide reductase 61.3 29 0.00099 32.5 8.0 103 79-184 323-454 (638)
365 2uvk_A YJHT; unknown function, 56.5 93 0.0032 26.6 10.6 17 56-72 168-184 (357)
366 2zwa_A Leucine carboxyl methyl 54.5 1.5E+02 0.0053 28.4 15.4 63 94-157 454-526 (695)
367 3lma_A Stage V sporulation pro 54.3 6.5 0.00022 34.2 2.5 32 346-380 50-81 (347)
368 4fhn_B Nucleoporin NUP120; pro 53.6 35 0.0012 35.2 8.2 35 82-118 241-275 (1139)
369 2zwa_A Leucine carboxyl methyl 52.7 1.7E+02 0.0057 28.2 12.8 62 94-155 503-579 (695)
370 2fsj_A Hypothetical protein TA 52.7 11 0.00036 33.0 3.6 37 341-380 264-301 (346)
371 2xzh_A Clathrin heavy chain 1; 51.0 1.2E+02 0.0042 26.3 10.8 67 78-146 259-325 (365)
372 4fhn_B Nucleoporin NUP120; pro 50.4 15 0.00051 38.0 4.8 38 124-161 239-276 (1139)
373 3oit_A OS07G0271500 protein; t 50.0 14 0.00048 32.8 4.0 35 346-380 88-122 (387)
374 2woz_A Kelch repeat and BTB do 49.2 1.2E+02 0.004 25.4 15.7 102 48-157 18-140 (318)
375 3ov2_A Curcumin synthase; type 48.9 15 0.00051 32.7 4.0 36 345-380 93-128 (393)
376 3f7f_A Nucleoporin NUP120; nuc 47.2 33 0.0011 33.2 6.2 36 125-162 224-259 (729)
377 3l9k_W Dynein intermediate cha 45.4 22 0.00074 19.5 2.7 17 352-368 16-32 (38)
378 2uvk_A YJHT; unknown function, 45.0 1.4E+02 0.0049 25.3 16.3 93 46-143 21-128 (357)
379 3a5r_A Benzalacetone synthase; 43.9 20 0.00068 31.8 4.0 29 352-380 96-124 (387)
380 3euo_A Type III pentaketide sy 43.7 17 0.00058 32.1 3.6 25 356-380 83-107 (379)
381 1i88_A CHS2, chalcone synthase 41.8 22 0.00076 31.5 4.0 28 353-380 101-128 (389)
382 1xes_A Dihydropinosylvin synth 41.5 23 0.00077 31.8 4.0 28 353-380 124-151 (413)
383 3awk_A Chalcone synthase-like 41.5 23 0.00078 31.6 4.0 28 353-380 114-141 (402)
384 2p0u_A Stilbenecarboxylate syn 41.4 22 0.00077 31.8 4.0 29 352-380 118-146 (413)
385 2gel_A Putative GRAM negative 39.6 18 0.00062 29.4 2.8 23 358-380 38-60 (231)
386 1ee0_A 2-pyrone synthase; poly 39.5 25 0.00087 31.3 4.0 28 353-380 106-133 (402)
387 3e1h_A PKSIIINC, putative unch 38.2 23 0.00079 32.3 3.6 25 356-380 112-136 (465)
388 1hnj_A Beta-ketoacyl-acyl carr 37.9 30 0.001 29.4 4.2 26 355-380 217-242 (317)
389 3r6m_A YEAZ, resuscitation pro 37.9 21 0.00071 28.7 2.9 24 357-380 38-61 (213)
390 2d3m_A Pentaketide chromone sy 37.6 28 0.00097 31.0 4.0 28 353-380 114-141 (406)
391 2fsj_A Hypothetical protein TA 37.6 5.6 0.00019 34.8 -0.6 54 295-356 265-319 (346)
392 3led_A 3-oxoacyl-acyl carrier 37.5 30 0.001 30.7 4.2 28 353-380 288-315 (392)
393 3ei3_A DNA damage-binding prot 37.4 3.7E+02 0.013 27.8 24.8 101 55-156 531-641 (1158)
394 3h78_A PQS biosynthetic enzyme 37.2 17 0.00059 31.8 2.5 23 358-380 78-100 (359)
395 1zow_A 3-oxoacyl-[acyl-carrier 36.8 32 0.0011 29.2 4.2 25 356-380 212-236 (313)
396 1mzj_A Beta-ketoacylsynthase I 35.7 33 0.0011 29.6 4.1 25 356-380 231-255 (339)
397 3eno_A Putative O-sialoglycopr 35.7 29 0.001 30.0 3.7 26 355-380 53-78 (334)
398 4ewp_A 3-oxoacyl-[acyl-carrier 35.6 19 0.00065 31.3 2.5 23 358-380 66-88 (350)
399 3il3_A 3-oxoacyl-[acyl-carrier 35.5 16 0.00054 31.5 2.0 23 358-380 62-84 (323)
400 1ub7_A 3-oxoacyl-[acyl-carrier 35.2 29 0.00098 29.7 3.6 26 355-380 219-244 (322)
401 3s3l_A CERJ; acyltransferase, 34.0 19 0.00064 31.6 2.2 23 358-380 58-80 (357)
402 2x3e_A 3-oxoacyl-[acyl-carrier 33.9 31 0.0011 29.7 3.6 25 356-380 224-248 (331)
403 3gwa_A 3-oxoacyl-(acyl-carrier 33.9 20 0.00069 31.4 2.4 23 358-380 84-106 (365)
404 3s25_A Hypothetical 7-bladed b 33.8 2.1E+02 0.0073 24.0 15.6 89 85-184 110-203 (302)
405 1u0m_A Putative polyketide syn 33.6 37 0.0013 30.0 4.1 26 355-380 85-110 (382)
406 2h84_A Steely1; thiolase-fold, 33.6 31 0.001 30.3 3.6 27 354-380 95-121 (374)
407 3f7f_A Nucleoporin NUP120; nuc 33.4 77 0.0026 30.7 6.3 27 93-119 232-258 (729)
408 3il6_A 3-oxoacyl-[acyl-carrier 33.3 18 0.00061 31.1 1.9 23 358-380 56-78 (321)
409 4dfe_A 3-oxoacyl-[acyl-carrier 33.2 40 0.0014 29.0 4.2 25 356-380 234-258 (333)
410 4dfe_A 3-oxoacyl-[acyl-carrier 33.2 18 0.00061 31.3 1.9 23 358-380 69-91 (333)
411 3h78_A PQS biosynthetic enzyme 32.9 40 0.0014 29.4 4.2 25 356-380 254-278 (359)
412 2ebd_A 3-oxoacyl-[acyl-carrier 32.7 33 0.0011 29.0 3.6 26 355-380 209-234 (309)
413 2wg3_C Hedgehog-interacting pr 32.7 2.8E+02 0.0096 25.1 14.0 109 34-143 14-159 (463)
414 3zwu_A Alkaline phosphatase PH 32.6 1.8E+02 0.006 27.5 8.6 57 126-182 479-548 (592)
415 3s21_A 3-oxoacyl-[ACP] synthas 32.5 19 0.00064 31.4 1.9 23 358-380 72-94 (345)
416 4efi_A 3-oxoacyl-(acyl-carrier 32.4 19 0.00064 31.5 1.9 23 358-380 70-92 (354)
417 3v7i_A Putative polyketide syn 32.3 19 0.00064 32.3 1.9 27 354-380 137-163 (413)
418 3s3l_A CERJ; acyltransferase, 31.9 30 0.001 30.2 3.2 26 355-380 237-262 (357)
419 3il3_A 3-oxoacyl-[acyl-carrier 31.5 44 0.0015 28.7 4.1 25 356-380 224-248 (323)
420 2ebd_A 3-oxoacyl-[acyl-carrier 31.3 20 0.00069 30.4 1.9 25 356-380 52-76 (309)
421 3gwa_A 3-oxoacyl-(acyl-carrier 31.3 36 0.0012 29.8 3.6 26 355-380 265-290 (365)
422 2a6a_A Hypothetical protein TM 31.2 24 0.00081 28.4 2.2 26 355-380 46-71 (218)
423 3led_A 3-oxoacyl-acyl carrier 30.2 19 0.00065 32.0 1.6 23 358-380 121-143 (392)
424 1zow_A 3-oxoacyl-[acyl-carrier 30.1 22 0.00074 30.3 1.9 23 358-380 55-77 (313)
425 1ted_A PKS18; thiolase fold, s 29.8 44 0.0015 29.5 4.0 24 357-380 116-139 (393)
426 3s21_A 3-oxoacyl-[ACP] synthas 29.5 41 0.0014 29.1 3.6 25 356-380 246-270 (345)
427 1ub7_A 3-oxoacyl-[acyl-carrier 29.1 25 0.00086 30.0 2.2 23 358-380 54-76 (322)
428 1hnj_A Beta-ketoacyl-acyl carr 29.0 23 0.0008 30.2 1.9 23 358-380 55-77 (317)
429 2iik_A 3-ketoacyl-COA thiolase 28.8 24 0.00083 31.6 2.1 23 358-380 59-81 (418)
430 4ewp_A 3-oxoacyl-[acyl-carrier 27.8 36 0.0012 29.5 3.0 27 354-380 247-273 (350)
431 1u6e_A 3-oxoacyl-[acyl-carrier 27.4 26 0.00087 30.2 1.9 23 358-380 65-87 (335)
432 4efi_A 3-oxoacyl-(acyl-carrier 27.4 46 0.0016 28.9 3.6 26 355-380 243-268 (354)
433 1bpo_A Protein (clathrin); cla 27.3 3.6E+02 0.012 24.6 14.4 59 78-138 258-316 (494)
434 2ivn_A O-sialoglycoprotein end 26.9 50 0.0017 28.4 3.7 28 353-380 46-73 (330)
435 1mzj_A Beta-ketoacylsynthase I 26.9 26 0.00091 30.2 1.9 23 358-380 64-86 (339)
436 3lma_A Stage V sporulation pro 26.9 24 0.00082 30.7 1.6 25 357-381 208-232 (347)
437 4a9v_A PHOX; hydrolase, beta-p 26.5 3.8E+02 0.013 25.2 9.5 60 124-183 477-549 (592)
438 4egv_A Acetyl-COA acetyltransf 26.3 17 0.00059 33.7 0.6 23 358-380 46-68 (520)
439 1ted_A PKS18; thiolase fold, s 25.9 51 0.0017 29.2 3.6 25 356-380 287-311 (393)
440 2wg3_C Hedgehog-interacting pr 25.4 3.8E+02 0.013 24.2 15.2 107 79-186 14-160 (463)
441 3h1q_A Ethanolamine utilizatio 24.8 60 0.0021 26.7 3.7 28 343-370 198-225 (272)
442 1u6e_A 3-oxoacyl-[acyl-carrier 24.3 57 0.0019 27.9 3.6 25 356-380 232-256 (335)
443 3ljb_A Interferon-induced GTP- 24.0 36 0.0012 28.4 2.1 83 286-368 75-158 (271)
444 1avo_A 11S regulator; proteaso 23.8 74 0.0025 19.5 3.0 34 346-379 21-54 (60)
445 1xpm_A 3-hydroxy-3-methylgluta 23.8 58 0.002 28.8 3.6 27 354-380 205-231 (396)
446 2wu9_A 3-ketoacyl-COA thiolase 23.0 36 0.0012 30.8 2.1 23 358-380 59-81 (442)
447 3k12_A Uncharacterized protein 21.2 93 0.0032 22.1 3.6 27 351-377 35-61 (122)
448 3t3l_A Frataxin, mitochondrial 20.9 79 0.0027 22.9 3.1 29 340-368 7-35 (129)
449 2ewc_A Conserved hypothetical 20.8 93 0.0032 22.3 3.5 27 351-377 38-64 (126)
450 1qu9_A YJGF protein; structura 20.4 97 0.0033 22.2 3.6 26 352-377 47-72 (128)
451 3kjj_A NMB1025 protein; YJGF p 20.1 1E+02 0.0035 22.2 3.6 26 352-377 44-69 (128)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=1.2e-27 Score=211.88 Aligned_cols=213 Identities=17% Similarity=0.200 Sum_probs=176.4
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
...+.++|+ +.++++++.||+|++||+.. ...+..+.+|..+|.++.|+|++. +|++|+.|++|++||+.+++.+
T Consensus 16 V~~~~fsp~-~~~l~s~~~dg~v~lWd~~~--~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~s~d~~i~vwd~~~~~~~ 90 (304)
T 2ynn_A 16 VKGIDFHPT-EPWVLTTLYSGRVELWNYET--QVEVRSIQVTETPVRAGKFIARKN--WIIVGSDDFRIRVFNYNTGEKV 90 (304)
T ss_dssp EEEEEECSS-SSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEEEGGGT--EEEEEETTSEEEEEETTTCCEE
T ss_pred eEEEEECCC-CCEEEEEcCCCcEEEEECCC--CceeEEeeccCCcEEEEEEeCCCC--EEEEECCCCEEEEEECCCCcEE
Confidence 456777777 56899999999999999974 456788999999999999999876 8999999999999999999999
Q ss_pred EEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCC-eeeEEEecCCcceEEEEEcC-CCCEEEEEeCCCeEEEEec
Q psy4650 116 QTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTH-RLEISLTYGLERVWTISSLK-GSNNVAIGYDEGSVLLKVG 193 (381)
Q Consensus 116 ~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~-~~~~~~~~~~~~v~~v~~~~-~~~~l~~~~~dg~v~i~~~ 193 (381)
..+.+|.+.|.+++|+|++.++++|+.|++|++||+.++ .....+.+|...|.+++|+| ++..+++|+.||.+++|+-
T Consensus 91 ~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 91 VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred EEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 999999999999999999999999999999999999877 55677888999999999999 6789999999999999973
Q ss_pred CC------------C--------------ceEEEecCCCEEEEEecCceeecccccCCcc---ccccCCceEEeeehHHH
Q psy4650 194 RE------------E--------------PAVSMDVNGCKIIWARHSEVQQANLKTMPEV---FENITAGVVLTLSVHVT 244 (381)
Q Consensus 194 ~~------------~--------------~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dg~~l~~~~~d~ 244 (381)
.. . .+++-..++...+|+.........+.++... +.|+|++..+++++.|+
T Consensus 171 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg 250 (304)
T 2ynn_A 171 GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG 250 (304)
T ss_dssp TCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCC
Confidence 21 1 1222223334556766655555555444332 57889999999999999
Q ss_pred HHhccCCCc
Q psy4650 245 IKYRLDISD 253 (381)
Q Consensus 245 ~~~~~d~~~ 253 (381)
.++.||...
T Consensus 251 ~i~iWd~~~ 259 (304)
T 2ynn_A 251 TLKIWNSST 259 (304)
T ss_dssp CEEEEETTT
T ss_pred eEEEEECCC
Confidence 999999764
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=2.4e-27 Score=218.93 Aligned_cols=211 Identities=19% Similarity=0.268 Sum_probs=175.3
Q ss_pred eeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEE
Q psy4650 38 DITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 117 (381)
Q Consensus 38 ~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~ 117 (381)
.+.++++ ..++++|+.||+|++||... ......+.+|.+.|.+++|+|++. +|++|+.|++|++||+.++.++..
T Consensus 113 ~~~~~p~-~~~l~s~s~Dg~i~vwd~~~--~~~~~~l~~h~~~V~~v~~~~~~~--~l~sgs~D~~i~iwd~~~~~~~~~ 187 (410)
T 1vyh_C 113 RVIFHPV-FSVMVSASEDATIKVWDYET--GDFERTLKGHTDSVQDISFDHSGK--LLASCSADMTIKLWDFQGFECIRT 187 (410)
T ss_dssp EEEECSS-SSEEEEEESSSCEEEEETTT--CCCCEEECCCSSCEEEEEECTTSS--EEEEEETTSCCCEEETTSSCEEEC
T ss_pred EEEEcCC-CCEEEEEeCCCeEEEEECCC--CcEEEEEeccCCcEEEEEEcCCCC--EEEEEeCCCeEEEEeCCCCceeEE
Confidence 4556665 56899999999999999874 456788999999999999999876 899999999999999999999999
Q ss_pred eccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCc
Q psy4650 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEP 197 (381)
Q Consensus 118 ~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~ 197 (381)
+.+|...|.+++|+|++..+++|+.|++|++||+.++..+..+.+|...|.++.++|++.++++|+.||.+++|+.....
T Consensus 188 ~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~ 267 (410)
T 1vyh_C 188 MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267 (410)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999743211
Q ss_pred -------------------------------------------eEEEecCCCEEEEEecCceeecccccCCc---ccccc
Q psy4650 198 -------------------------------------------AVSMDVNGCKIIWARHSEVQQANLKTMPE---VFENI 231 (381)
Q Consensus 198 -------------------------------------------~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 231 (381)
+++-..++...+|+.........+.++.. .+.|+
T Consensus 268 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~ 347 (410)
T 1vyh_C 268 CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 347 (410)
T ss_dssp EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred eeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEc
Confidence 11122223345566554444444444332 25788
Q ss_pred CCceEEeeehHHHHHhccCCCc
Q psy4650 232 TAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 232 ~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
|+|.++++++.|+.++.||+..
T Consensus 348 ~~g~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 348 SGGKFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp SSSSCEEEEETTTEEEEECCTT
T ss_pred CCCCEEEEEeCCCeEEEEECCC
Confidence 9999999999999999998854
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.95 E-value=1.4e-26 Score=206.55 Aligned_cols=195 Identities=19% Similarity=0.227 Sum_probs=170.0
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
..+.+.++ +.++++++.+|.+++|++.. ......+.+|...|.+++|+|++. +|++|+.|+.|++||+.+++.+.
T Consensus 126 ~~~~~spd-g~~l~~g~~dg~v~i~~~~~--~~~~~~~~~~~~~v~~~~~spdg~--~lasg~~dg~i~iwd~~~~~~~~ 200 (321)
T 3ow8_A 126 WTLAFSPD-SQYLATGTHVGKVNIFGVES--GKKEYSLDTRGKFILSIAYSPDGK--YLASGAIDGIINIFDIATGKLLH 200 (321)
T ss_dssp CCEEECTT-SSEEEEECTTSEEEEEETTT--CSEEEEEECSSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEECCC-CCEEEEEcCCCcEEEEEcCC--CceeEEecCCCceEEEEEECCCCC--EEEEEcCCCeEEEEECCCCcEEE
Confidence 34566666 56899999999999999974 345567888999999999999887 89999999999999999999999
Q ss_pred EeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCC
Q psy4650 117 TLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREE 196 (381)
Q Consensus 117 ~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~ 196 (381)
.+.+|..+|.+++|+|++.+|++|+.|++|++||+.++.....+.+|...|.+++|+|++.++++++.||.+++
T Consensus 201 ~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~i------ 274 (321)
T 3ow8_A 201 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKV------ 274 (321)
T ss_dssp EECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE------
T ss_pred EEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEE------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCC
Q psy4650 197 PAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 197 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~ 252 (381)
||..++.++.....+.. .+ ..++|+|+|..+++++.|+.+++||..
T Consensus 275 ----wd~~~~~~~~~~~~h~~--~v----~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 275 ----WDVGTRTCVHTFFDHQD--QV----WGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ----EETTTTEEEEEECCCSS--CE----EEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred ----EeCCCCEEEEEEcCCCC--cE----EEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 88877777665533211 11 125788999999999999999999863
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=5.1e-26 Score=204.68 Aligned_cols=199 Identities=14% Similarity=0.223 Sum_probs=169.3
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCcc--ceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVA--TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~--~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 114 (381)
..+.+.++ +.++++++.|+.+++|++.... ......+.+|.+.|.++.|++++ .+++++.|++|++||+.++..
T Consensus 101 ~~~~~s~~-~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~l~s~s~d~~i~~wd~~~~~~ 176 (340)
T 1got_B 101 MTCAYAPS-GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN---QIVTSSGDTTCALWDIETGQQ 176 (340)
T ss_dssp EEEEECTT-SSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT---EEEEEETTSCEEEEETTTTEE
T ss_pred EEEEECCC-CCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC---cEEEEECCCcEEEEECCCCcE
Confidence 34555665 5689999999999999986432 24567788999999999999865 489999999999999999999
Q ss_pred EEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecC
Q psy4650 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGR 194 (381)
Q Consensus 115 ~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~ 194 (381)
+..+.+|.+.|.+++|+|++.++++|+.|+.|++||++++.....+.+|...|.+++|+|++.++++|+.||.+++
T Consensus 177 ~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~i---- 252 (340)
T 1got_B 177 TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRL---- 252 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE----
T ss_pred EEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEE----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 195 EEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 195 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
||..++..+.......... ... .++|+|+|..+++++.++..+.||...
T Consensus 253 ------wd~~~~~~~~~~~~~~~~~---~v~-~~~~s~~g~~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 253 ------FDLRADQELMTYSHDNIIC---GIT-SVSFSKSGRLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp ------EETTTTEEEEEECCTTCCS---CEE-EEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ------EECCCCcEEEEEccCCccc---ceE-EEEECCCCCEEEEECCCCeEEEEEccc
Confidence 7777776665443221111 111 157899999999999999999999754
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.95 E-value=4.2e-26 Score=203.52 Aligned_cols=155 Identities=19% Similarity=0.218 Sum_probs=137.6
Q ss_pred ceeeeecCC---CceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCC
Q psy4650 36 KVDITTNKD---MIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK 112 (381)
Q Consensus 36 ~~~i~~~~~---~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~ 112 (381)
.+.+.+.++ ...++++|+.|++|++|+...........+.+|...|.+++|+|++. ++++++.|++|++||+.++
T Consensus 35 V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~--~l~s~s~D~~i~lWd~~~~ 112 (321)
T 3ow8_A 35 IWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLP--IAASSSLDAHIRLWDLENG 112 (321)
T ss_dssp EEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSS--EEEEEETTSEEEEEETTTT
T ss_pred EEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCC--EEEEEeCCCcEEEEECCCC
Confidence 355655543 35699999999999999986544445667899999999999999776 8999999999999999999
Q ss_pred eEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy4650 113 TCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192 (381)
Q Consensus 113 ~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~ 192 (381)
+.+..+..|...+.+++|+|++.++++|+.|+.+++||+.+++....+..+...+.+++|+|+++++++|+.||.+++|+
T Consensus 113 ~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd 192 (321)
T 3ow8_A 113 KQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 192 (321)
T ss_dssp EEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999954
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.95 E-value=2.9e-26 Score=206.39 Aligned_cols=198 Identities=14% Similarity=0.160 Sum_probs=159.6
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
..+.+.++ +.++++|+.|++|++||+.. ..++..+.+|.+.|.+++|+|++.. ++++|+.|++|++||+.++++..
T Consensus 131 ~~v~~spd-g~~l~sgs~d~~i~iwd~~~--~~~~~~~~~h~~~V~~~~~~~~~~~-~l~s~s~D~~v~iwd~~~~~~~~ 206 (344)
T 4gqb_B 131 STVSVLSS-GTQAVSGSKDICIKVWDLAQ--QVVLSSYRAHAAQVTCVAASPHKDS-VFLSCSEDNRILLWDTRCPKPAS 206 (344)
T ss_dssp EEEEECTT-SSEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEECSSCTT-EEEEEETTSCEEEEETTSSSCEE
T ss_pred EEEEECCC-CCEEEEEeCCCeEEEEECCC--CcEEEEEcCcCCceEEEEecCCCCC-ceeeeccccccccccccccceee
Confidence 46667776 56999999999999999974 5678899999999999999998763 78999999999999999998887
Q ss_pred Eec--cCCCCEEEEEEecCC-CEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCC-CEEEEEeCCCeEEEEe
Q psy4650 117 TLE--GHGQNISAVCFHPEL-PIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGS-NNVAIGYDEGSVLLKV 192 (381)
Q Consensus 117 ~~~--~~~~~v~~~~~~p~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~l~~~~~dg~v~i~~ 192 (381)
.+. .|...+.+++|+|++ .++++|+.|++|++||+++++.+..+.+|...|++++|+|++ ++|++|+.||.+++
T Consensus 207 ~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~v-- 284 (344)
T 4gqb_B 207 QIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAV-- 284 (344)
T ss_dssp ECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEE--
T ss_pred eeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEE--
Confidence 774 355678999999955 588999999999999999999999999999999999999997 57999999999999
Q ss_pred cCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCce-EEeeehHHHHHhccCCCcCh
Q psy4650 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGV-VLTLSVHVTIKYRLDISDSH 255 (381)
Q Consensus 193 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~-~l~~~~~d~~~~~~d~~~~~ 255 (381)
||..++.++. ...+ ...+ ..++|+|++. ++++++.|+.+..|++...+
T Consensus 285 --------wd~~~~~~~~-~~~H--~~~V----~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 285 --------LDSSLSELFR-SQAH--RDFV----RDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp --------ECTTCCEEEE-ECCC--SSCE----EEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred --------EECCCCcEEE-EcCC--CCCE----EEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 7776666442 1111 1111 1257889886 56688999999999986543
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=4.8e-26 Score=210.17 Aligned_cols=210 Identities=18% Similarity=0.219 Sum_probs=174.0
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
..+.+.++ +.++++|+.|++|++||+.. ...+..+.+|...|.+++|+|++. ++++|+.|++|++||+.++.++.
T Consensus 154 ~~v~~~~~-~~~l~sgs~D~~i~iwd~~~--~~~~~~~~~h~~~V~~v~~~p~~~--~l~s~s~D~~i~~wd~~~~~~~~ 228 (410)
T 1vyh_C 154 QDISFDHS-GKLLASCSADMTIKLWDFQG--FECIRTMHGHDHNVSSVSIMPNGD--HIVSASRDKTIKMWEVQTGYCVK 228 (410)
T ss_dssp EEEEECTT-SSEEEEEETTSCCCEEETTS--SCEEECCCCCSSCEEEEEECSSSS--EEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEEcCC-CCEEEEEeCCCeEEEEeCCC--CceeEEEcCCCCCEEEEEEeCCCC--EEEEEeCCCeEEEEECCCCcEEE
Confidence 45666665 56999999999999999863 456788999999999999999876 89999999999999999999999
Q ss_pred EeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCC--------------------C
Q psy4650 117 TLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKG--------------------S 176 (381)
Q Consensus 117 ~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~--------------------~ 176 (381)
.+.+|...|.++.|+|++.++++|+.|++|++||+.++.....+.+|...|.+++|+|+ |
T Consensus 229 ~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 308 (410)
T 1vyh_C 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPG 308 (410)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------C
T ss_pred EEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999996 6
Q ss_pred CEEEEEeCCCeEEEEecCC-----------Cc------------eEEEecCCCEEEEEecCceeecccccCCc---cccc
Q psy4650 177 NNVAIGYDEGSVLLKVGRE-----------EP------------AVSMDVNGCKIIWARHSEVQQANLKTMPE---VFEN 230 (381)
Q Consensus 177 ~~l~~~~~dg~v~i~~~~~-----------~~------------~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 230 (381)
.++++|+.||.+++|+-.. .. +++-..++...+|+.........+.++.. .++|
T Consensus 309 ~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~ 388 (410)
T 1vyh_C 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDF 388 (410)
T ss_dssp CEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEE
Confidence 7899999999999997332 11 11222223356676655444444444432 2678
Q ss_pred cCCceEEeeehHHHHHhccCC
Q psy4650 231 ITAGVVLTLSVHVTIKYRLDI 251 (381)
Q Consensus 231 ~~dg~~l~~~~~d~~~~~~d~ 251 (381)
+|++..+++++.|+....|++
T Consensus 389 ~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 389 HKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CSSSSCEEEEETTSEEEEEC-
T ss_pred cCCCCEEEEEeCCCcEEEEeC
Confidence 999999999999999988875
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.95 E-value=3.3e-26 Score=206.00 Aligned_cols=199 Identities=19% Similarity=0.216 Sum_probs=159.9
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCcccee--eEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLI--LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~--~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
..++.+.++ ..+++|+.||+|++||+....... ...+.+|.+.|.+++|+|++. +|++|+.|++|++||+.+++
T Consensus 85 v~~~~~s~d--~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~--~l~sgs~d~~i~iwd~~~~~ 160 (344)
T 4gqb_B 85 VADLTWVGE--RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT--QAVSGSKDICIKVWDLAQQV 160 (344)
T ss_dssp EEEEEEETT--TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTTE
T ss_pred EEEEEEeCC--CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC--EEEEEeCCCeEEEEECCCCc
Confidence 346666665 368899999999999997543322 234669999999999999887 89999999999999999999
Q ss_pred EEEEeccCCCCEEEEEEecCCC-EEEEEeCCCCEEEEeCCCCeeeEEEe--cCCcceEEEEEcCC-CCEEEEEeCCCeEE
Q psy4650 114 CVQTLEGHGQNISAVCFHPELP-IVITGSEDGSVRVWHSGTHRLEISLT--YGLERVWTISSLKG-SNNVAIGYDEGSVL 189 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~--~~~~~v~~v~~~~~-~~~l~~~~~dg~v~ 189 (381)
++..+.+|.+.|.+++|+|++. ++++|+.|++|++||+++++....+. .+...+.+++|+|+ +.++++|+.||.|+
T Consensus 161 ~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~ 240 (344)
T 4gqb_B 161 VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVS 240 (344)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEE
Confidence 9999999999999999999885 78999999999999999998887764 35567899999995 57899999999999
Q ss_pred EEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCc-eEEeeehHHHHHhccCCCcC
Q psy4650 190 LKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAG-VVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 190 i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~d~~~~~~d~~~~ 254 (381)
+ ||..++.++..+..+.. .+. .++|+|+| .++++++.|+.+++||....
T Consensus 241 ~----------wd~~~~~~~~~~~~h~~--~v~----~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 241 L----------VDTKSTSCVLSSAVHSQ--CVT----GLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp E----------EESCC--CCEEEECCSS--CEE----EEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred E----------EECCCCcEEEEEcCCCC--CEE----EEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 9 77777766555433211 111 15788998 57889999999999998654
No 9
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=7.5e-26 Score=201.75 Aligned_cols=199 Identities=15% Similarity=0.215 Sum_probs=167.5
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCcc---ceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVA---TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~---~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
..+.+.++...++++|+.|++|++|++.... ...+..+.+|...|.+++|+|++. ++++|+.|++|++||+.+++
T Consensus 21 ~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~--~l~s~s~D~~v~~wd~~~~~ 98 (319)
T 3frx_A 21 TSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGA--YALSASWDKTLRLWDVATGE 98 (319)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTTE
T ss_pred EEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCC--EEEEEeCCCEEEEEECCCCC
Confidence 4566677667899999999999999985322 345678999999999999999877 89999999999999999999
Q ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCC------CCEEEEEeCCCe
Q psy4650 114 CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKG------SNNVAIGYDEGS 187 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~------~~~l~~~~~dg~ 187 (381)
.+..+.+|...|.+++|+|++..+++|+.|++|++||+. +..+..+.+|...|.++.+.|. +..+++++.|+.
T Consensus 99 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~ 177 (319)
T 3frx_A 99 TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKM 177 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSC
T ss_pred eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCE
Confidence 999999999999999999999999999999999999996 4567788889999999999985 448999999999
Q ss_pred EEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 188 VLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 188 v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
+++ ||..++........+. ..+ ..++|+|+|..+++++.|+.++.||+...
T Consensus 178 i~~----------wd~~~~~~~~~~~~h~--~~v----~~~~~sp~g~~l~s~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 178 VKA----------WNLNQFQIEADFIGHN--SNI----NTLTASPDGTLIASAGKDGEIMLWNLAAK 228 (319)
T ss_dssp EEE----------EETTTTEEEEEECCCC--SCE----EEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred EEE----------EECCcchhheeecCCC--CcE----EEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 999 7776666554433221 111 11578899999999999999999998653
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=1.1e-25 Score=200.56 Aligned_cols=210 Identities=18% Similarity=0.268 Sum_probs=166.5
Q ss_pred eeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEE
Q psy4650 38 DITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 117 (381)
Q Consensus 38 ~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~ 117 (381)
.+.+.++ +.++++++.|++|++||+.. ...+..+.+|.+.|.+++|+|++. ++++|+.|++|++||+. +.++..
T Consensus 70 ~~~~s~d-g~~l~s~s~D~~v~~wd~~~--~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~s~D~~i~vwd~~-~~~~~~ 143 (319)
T 3frx_A 70 DCTLTAD-GAYALSASWDKTLRLWDVAT--GETYQRFVGHKSDVMSVDIDKKAS--MIISGSRDKTIKVWTIK-GQCLAT 143 (319)
T ss_dssp EEEECTT-SSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEECTTSC--EEEEEETTSCEEEEETT-SCEEEE
T ss_pred EEEECCC-CCEEEEEeCCCEEEEEECCC--CCeeEEEccCCCcEEEEEEcCCCC--EEEEEeCCCeEEEEECC-CCeEEE
Confidence 4555655 56999999999999999974 456788999999999999999876 89999999999999996 456788
Q ss_pred eccCCCCEEEEEEecCC------CEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy4650 118 LEGHGQNISAVCFHPEL------PIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLK 191 (381)
Q Consensus 118 ~~~~~~~v~~~~~~p~~------~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~ 191 (381)
+.+|...|.++.|+|.. ..+++++.|+.|++||+.+++....+.+|...|.+++|+|+|+++++|+.||.+++|
T Consensus 144 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iw 223 (319)
T 3frx_A 144 LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLW 223 (319)
T ss_dssp ECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred EeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 88999999999999954 489999999999999999999999999999999999999999999999999999998
Q ss_pred ecCCCce------------EEEec---------CCCEEEEEecCceeecccc-----------cCCccccccCCceEEee
Q psy4650 192 VGREEPA------------VSMDV---------NGCKIIWARHSEVQQANLK-----------TMPEVFENITAGVVLTL 239 (381)
Q Consensus 192 ~~~~~~~------------~~~d~---------~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~dg~~l~~ 239 (381)
+...... +.|.+ ..+..+|..........+. .....++|+|||+.|++
T Consensus 224 d~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 303 (319)
T 3frx_A 224 NLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFA 303 (319)
T ss_dssp ETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEE
T ss_pred ECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEE
Confidence 7543211 11222 1233444443322111111 11112689999999999
Q ss_pred ehHHHHHhccCCCc
Q psy4650 240 SVHVTIKYRLDISD 253 (381)
Q Consensus 240 ~~~d~~~~~~d~~~ 253 (381)
++.|+.+++|++..
T Consensus 304 g~~Dg~i~vWd~~t 317 (319)
T 3frx_A 304 GYTDNVIRVWQVMT 317 (319)
T ss_dssp EETTSCEEEEEEEE
T ss_pred eecCceEEEEEEee
Confidence 99999999998753
No 11
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.95 E-value=1.1e-25 Score=199.76 Aligned_cols=199 Identities=20% Similarity=0.295 Sum_probs=170.1
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
...+.+.++ +.++++++.||.+++|+... ......+.+|...|.+++|+|++. +|++|+.|+.|++||+.+++.+
T Consensus 26 v~~~~~s~~-~~~l~s~~~dg~i~iw~~~~--~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~~~d~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 26 VSSVKFSPN-GEWLASSSADKLIKIWGAYD--GKFEKTISGHKLGISDVAWSSDSN--LLVSASDDKTLKIWDVSSGKCL 100 (312)
T ss_dssp EEEEEECTT-SSEEEEEETTSCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEEECCC-CCEEEEeeCCCeEEEEeCCC--cccchhhccCCCceEEEEEcCCCC--EEEEECCCCEEEEEECCCCcEE
Confidence 345666766 56899999999999999864 456678899999999999999876 8999999999999999999999
Q ss_pred EEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCC
Q psy4650 116 QTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGRE 195 (381)
Q Consensus 116 ~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~ 195 (381)
..+.+|...|.+++|+|++.++++|+.|+.|++||+.+++.+..+..|...+.+++|+|++.++++++.||.+++
T Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~----- 175 (312)
T 4ery_A 101 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI----- 175 (312)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE-----
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEE-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 196 EPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 196 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
||..++..+........ .....+.|+|+|..+++++.++..+.||+...
T Consensus 176 -----wd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 176 -----WDTASGQCLKTLIDDDN-----PPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp -----EETTTCCEEEEECCSSC-----CCEEEEEECTTSSEEEEEETTTEEEEEETTTT
T ss_pred -----EECCCCceeeEEeccCC-----CceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 77766655544321110 00111568899999999999999999998653
No 12
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.95 E-value=3.7e-26 Score=206.00 Aligned_cols=198 Identities=19% Similarity=0.171 Sum_probs=160.0
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeE-eeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCC--
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILK-TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK-- 112 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~-~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~-- 112 (381)
.+.+.++++ +.++++|+.|++|++|+.......... ...+|.+.|.+++|+|++. +|++|+.|+++++|+...+
T Consensus 19 v~~l~~sp~-g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~--~l~s~s~D~~v~iw~~~~~~~ 95 (345)
T 3fm0_A 19 CWFLAWNPA-GTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN--YLASASFDATTCIWKKNQDDF 95 (345)
T ss_dssp EEEEEECTT-SSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSS--EEEEEETTSCEEEEEECCC-E
T ss_pred EEEEEECCC-CCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCC--EEEEEECCCcEEEEEccCCCe
Confidence 456777776 569999999999999998643222222 3468999999999999876 8999999999999999876
Q ss_pred eEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCe---eeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEE
Q psy4650 113 TCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHR---LEISLTYGLERVWTISSLKGSNNVAIGYDEGSVL 189 (381)
Q Consensus 113 ~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~---~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~ 189 (381)
.++..+.+|...|.+++|+|++.+|++|+.|++|++||+.++. .+..+..|...|.+++|+|++.++++|+.|+.++
T Consensus 96 ~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~ 175 (345)
T 3fm0_A 96 ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVK 175 (345)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEE
T ss_pred EEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEE
Confidence 4577889999999999999999999999999999999998763 4566788999999999999999999999999999
Q ss_pred EEecCCCceEEEecCCCEEE--EEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCC
Q psy4650 190 LKVGREEPAVSMDVNGCKII--WARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 190 i~~~~~~~~~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~ 252 (381)
+ ||..++... .....+ ...+ ..++|+|+|..|++++.|+.+.+|+..
T Consensus 176 ~----------w~~~~~~~~~~~~~~~h--~~~v----~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 176 L----------YREEEDDWVCCATLEGH--ESTV----WSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp E----------EEEETTEEEEEEEECCC--SSCE----EEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred E----------EEecCCCEEEEEEecCC--CCce----EEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 9 555444322 111111 1111 125789999999999999999999863
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.95 E-value=1.6e-25 Score=201.79 Aligned_cols=218 Identities=15% Similarity=0.179 Sum_probs=168.6
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCC---
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK--- 112 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~--- 112 (381)
...+.+.++ +.++++++.|+++++|+........+..+.+|.+.|.+++|+|++. +|++|+.|++|++||+.++
T Consensus 64 v~~~~~sp~-g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~--~l~s~s~D~~v~iwd~~~~~~~ 140 (345)
T 3fm0_A 64 VRKVAWSPC-GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN--LLATCSRDKSVWVWEVDEEDEY 140 (345)
T ss_dssp EEEEEECTT-SSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEEECTTSCE
T ss_pred EEEEEECCC-CCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCC--EEEEEECCCeEEEEECCCCCCe
Confidence 345667776 5699999999999999987544566788999999999999999876 8999999999999999876
Q ss_pred eEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCe--eeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 113 TCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHR--LEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 113 ~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
.++..+.+|...|.+++|+|++.++++|+.|++|++||..++. ....+.+|...|.+++|+|+|++|++|+.||.+++
T Consensus 141 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~i 220 (345)
T 3fm0_A 141 ECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRI 220 (345)
T ss_dssp EEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEE
Confidence 3466788999999999999999999999999999999998875 44678889999999999999999999999999999
Q ss_pred EecC---------------------------CC------------ceEEEecCCCEEEEEecCceee---------cccc
Q psy4650 191 KVGR---------------------------EE------------PAVSMDVNGCKIIWARHSEVQQ---------ANLK 222 (381)
Q Consensus 191 ~~~~---------------------------~~------------~~~~~d~~~~~~~~~~~~~~~~---------~~~~ 222 (381)
|... .. .+.+-..+....+|........ ....
T Consensus 221 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~ 300 (345)
T 3fm0_A 221 WRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQ 300 (345)
T ss_dssp EEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETT
T ss_pred eccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecc
Confidence 9621 01 1112222344556665432110 0011
Q ss_pred cCCc---cccccCCc-eEEeeehHHHHHhccCCCcChh
Q psy4650 223 TMPE---VFENITAG-VVLTLSVHVTIKYRLDISDSHR 256 (381)
Q Consensus 223 ~~~~---~~~~~~dg-~~l~~~~~d~~~~~~d~~~~~~ 256 (381)
++.. .++|+|++ ..+++++.|+.+..|++....+
T Consensus 301 ~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 301 AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp SSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred cccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 2221 16788987 4899999999999999876544
No 14
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.94 E-value=2.1e-25 Score=201.80 Aligned_cols=201 Identities=14% Similarity=0.194 Sum_probs=164.9
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccc----------------------------------------------ee
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVAT----------------------------------------------LI 70 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~----------------------------------------------~~ 70 (381)
+.+.+.++ +.++++|+.||+|++||...... ..
T Consensus 68 ~~~~~s~d-~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~ 146 (354)
T 2pbi_B 68 LCMDWCKD-KRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAK 146 (354)
T ss_dssp EEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGG
T ss_pred EEEEECCC-CCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccccccccc
Confidence 45666666 46899999999999999643211 12
Q ss_pred eEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEEEEEec--CCCEEEEEeCCCCEEE
Q psy4650 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP--ELPIVITGSEDGSVRV 148 (381)
Q Consensus 71 ~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p--~~~~l~s~~~d~~i~v 148 (381)
...+.+|.+.|.++.|+|++. .|++|+.|++|++||+.+++.+..+.+|...|.+++|+| ++..+++|+.|+.|++
T Consensus 147 ~~~~~~h~~~v~~~~~~~~~~--~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~ 224 (354)
T 2pbi_B 147 KKSVAMHTNYLSACSFTNSDM--QILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMV 224 (354)
T ss_dssp CEEEEECSSCEEEEEECSSSS--EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEE
T ss_pred ceeeeccCCcEEEEEEeCCCC--EEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEE
Confidence 234567899999999999776 799999999999999999999999999999999999988 4679999999999999
Q ss_pred EeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccc
Q psy4650 149 WHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVF 228 (381)
Q Consensus 149 wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (381)
||+++++.+..+.+|...|.+++|+|++..+++|+.|+.+++ ||..++..+.....+... .+.. .+
T Consensus 225 wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~l----------wd~~~~~~~~~~~~~~~~---~~~~-~~ 290 (354)
T 2pbi_B 225 WDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRL----------YDLRADREVAIYSKESII---FGAS-SV 290 (354)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE----------EETTTTEEEEEECCTTCC---SCEE-EE
T ss_pred EECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEE----------EECCCCcEEEEEcCCCcc---ccee-EE
Confidence 999999999999999999999999999999999999999999 777666554333222111 1111 25
Q ss_pred cccCCceEEeeehHHHHHhccCCCcC
Q psy4650 229 ENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 229 ~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
+|+|+|..+++++.++..+.||+...
T Consensus 291 ~~s~~g~~l~~g~~d~~i~vwd~~~~ 316 (354)
T 2pbi_B 291 DFSLSGRLLFAGYNDYTINVWDVLKG 316 (354)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EEeCCCCEEEEEECCCcEEEEECCCC
Confidence 78899999999999999999998543
No 15
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.94 E-value=1.5e-25 Score=201.69 Aligned_cols=183 Identities=18% Similarity=0.266 Sum_probs=156.0
Q ss_pred EEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEE
Q psy4650 48 YKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISA 127 (381)
Q Consensus 48 ~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~ 127 (381)
.+++++.|++|++||+.. ...+..+.+|.+.|.+++|+|++. ++++|+.|++|++||+.++.+...+.+|...|.+
T Consensus 156 ~l~s~s~d~~i~~wd~~~--~~~~~~~~~h~~~v~~~~~~~~~~--~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~ 231 (340)
T 1got_B 156 QIVTSSGDTTCALWDIET--GQQTTTFTGHTGDVMSLSLAPDTR--LFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231 (340)
T ss_dssp EEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEE
T ss_pred cEEEEECCCcEEEEECCC--CcEEEEEcCCCCceEEEEECCCCC--EEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEE
Confidence 488999999999999974 456788999999999999999776 8999999999999999999999999999999999
Q ss_pred EEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecC--CcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCC
Q psy4650 128 VCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYG--LERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNG 205 (381)
Q Consensus 128 ~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~--~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~ 205 (381)
++|+|++..+++|+.|++|++||+++++.+..+... ...|.+++|+|+|.++++|+.||.+++ ||..+
T Consensus 232 v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~v----------wd~~~ 301 (340)
T 1got_B 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV----------WDALK 301 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEE----------EETTT
T ss_pred EEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEE----------EEccc
Confidence 999999999999999999999999999887776532 347999999999999999999999999 66666
Q ss_pred CEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccC
Q psy4650 206 CKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLD 250 (381)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d 250 (381)
+..+.....+.. .+. .++|+|+|..+++++.|+.+++|+
T Consensus 302 ~~~~~~~~~h~~--~v~----~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 302 ADRAGVLAGHDN--RVS----CLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CCEEEEEECCSS--CEE----EEEECTTSSCEEEEETTSCEEEEC
T ss_pred CcEeeEeecCCC--cEE----EEEEcCCCCEEEEEcCCccEEecC
Confidence 555444332211 111 157889999999999998888875
No 16
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.94 E-value=1.9e-25 Score=202.03 Aligned_cols=195 Identities=14% Similarity=0.208 Sum_probs=161.5
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
..+.+.++ ...+++++.|++|++||+.. ...+..+.+|...|.++.|+|+....+|++|+.|++|++||+.++.++.
T Consensus 158 ~~~~~~~~-~~~l~t~s~D~~v~lwd~~~--~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~ 234 (354)
T 2pbi_B 158 SACSFTNS-DMQILTASGDGTCALWDVES--GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQ 234 (354)
T ss_dssp EEEEECSS-SSEEEEEETTSEEEEEETTT--CCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEE
T ss_pred EEEEEeCC-CCEEEEEeCCCcEEEEeCCC--CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 34555555 45889999999999999974 4567889999999999999986544589999999999999999999999
Q ss_pred EeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecC--CcceEEEEEcCCCCEEEEEeCCCeEEEEecC
Q psy4650 117 TLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYG--LERVWTISSLKGSNNVAIGYDEGSVLLKVGR 194 (381)
Q Consensus 117 ~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~--~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~ 194 (381)
.+.+|...|.+++|+|++..+++|+.|++|++||++++..+..+..+ ...+.+++|+|+|.++++|+.|+.+++
T Consensus 235 ~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~v---- 310 (354)
T 2pbi_B 235 AFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINV---- 310 (354)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEE----
T ss_pred EecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEE----
Confidence 99999999999999999999999999999999999998877766543 347899999999999999999999999
Q ss_pred CCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccC
Q psy4650 195 EEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLD 250 (381)
Q Consensus 195 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d 250 (381)
||..++..+.....+. ..+ ..++|+|||..+++++.|+..++|+
T Consensus 311 ------wd~~~~~~~~~l~~h~--~~v----~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 311 ------WDVLKGSRVSILFGHE--NRV----STLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ------EETTTCSEEEEECCCS--SCE----EEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ------EECCCCceEEEEECCC--CcE----EEEEECCCCCEEEEEcCCCCEEecC
Confidence 6766655443332211 111 1157889999999999998887774
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=3.8e-25 Score=214.54 Aligned_cols=216 Identities=16% Similarity=0.154 Sum_probs=165.4
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEe-------------------------------------------
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKT------------------------------------------- 73 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~------------------------------------------- 73 (381)
..+.+.|+ +.++++|+.|++|++||+..........
T Consensus 63 ~~~~~spd-g~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~ 141 (611)
T 1nr0_A 63 TVAKTSPS-GYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNG 141 (611)
T ss_dssp EEEEECTT-SSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCB
T ss_pred EEEEECCC-CcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcc
Confidence 45666776 6799999999999999985322222222
Q ss_pred -eccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCC
Q psy4650 74 -LYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSG 152 (381)
Q Consensus 74 -l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~ 152 (381)
+.+|.+.|.+++|+|++. ..|++|+.|++|++||..+++....+.+|...|.+++|+|++.++++|+.|++|++||+.
T Consensus 142 ~l~gh~~~v~~v~f~p~~~-~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~ 220 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRP-FRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV 220 (611)
T ss_dssp CCCCCSSCEEEEEECSSSS-CEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eecCCCCCceEEEECCCCC-eEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECC
Confidence 345666677777776554 258999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeEEEe-------cCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCce------------------------EEE
Q psy4650 153 THRLEISLT-------YGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPA------------------------VSM 201 (381)
Q Consensus 153 ~~~~~~~~~-------~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~------------------------~~~ 201 (381)
+++....+. +|...|.+++|+|+|.+|++++.|+.+++|+...... ++.
T Consensus 221 ~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 300 (611)
T 1nr0_A 221 DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSI 300 (611)
T ss_dssp TCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEE
T ss_pred CCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEE
Confidence 999888874 7999999999999999999999999999987543211 111
Q ss_pred ecCCCEEEEEecCceeecccccCCc---cccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 202 DVNGCKIIWARHSEVQQANLKTMPE---VFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 202 d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
..++...+|..........+.++.. .++|+|||..+++++.|+.++.|++...
T Consensus 301 s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 301 SANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG 356 (611)
T ss_dssp ETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred eCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Confidence 2223334444333222222333322 2678999999999999999999998643
No 18
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.94 E-value=4.9e-25 Score=198.49 Aligned_cols=192 Identities=15% Similarity=0.187 Sum_probs=155.6
Q ss_pred cCCCceEEEEEecCCeEEEecCCCcc-----ceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 42 NKDMIEYKISYQESSRVKAFNPIQVA-----TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 42 ~~~~~~~~~s~~~d~~v~i~~~~~~~-----~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
.+..+.++++|+.|++|++|++.... ......+.+|...|.+++|+|++. ++++|+.|++|++||+.+++.+.
T Consensus 35 ~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~--~l~s~s~D~~v~lwd~~~~~~~~ 112 (343)
T 2xzm_R 35 ENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC--FAISSSWDKTLRLWDLRTGTTYK 112 (343)
T ss_dssp TTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT--EEEEEETTSEEEEEETTSSCEEE
T ss_pred cCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC--EEEEEcCCCcEEEEECCCCcEEE
Confidence 34346799999999999999986422 245677899999999999999876 89999999999999999999999
Q ss_pred EeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEe---cCCcceEEEEEcCCC----------CEEEEEe
Q psy4650 117 TLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLT---YGLERVWTISSLKGS----------NNVAIGY 183 (381)
Q Consensus 117 ~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~---~~~~~v~~v~~~~~~----------~~l~~~~ 183 (381)
.+.+|...|.+++|+|++..+++++.|++|++||+.... ..... .|...|.+++|+|++ .++++++
T Consensus 113 ~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~ 191 (343)
T 2xzm_R 113 RFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG 191 (343)
T ss_dssp EEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE
T ss_pred EEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEc
Confidence 999999999999999999999999999999999998443 33333 578889999999987 7899999
Q ss_pred CCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 184 DEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 184 ~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
.||.+++ ||. .+........+. ..+ ..++|+|+|.++++++.|+..+.||+..
T Consensus 192 ~d~~i~i----------wd~-~~~~~~~~~~h~--~~v----~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 192 WDGRLKV----------WNT-NFQIRYTFKAHE--SNV----NHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp TTSEEEE----------EET-TTEEEEEEECCS--SCE----EEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred CCCEEEE----------EcC-CCceeEEEcCcc--ccc----eEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 9999999 553 233222222111 011 1157889999999999999999999843
No 19
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.94 E-value=8e-25 Score=196.20 Aligned_cols=217 Identities=19% Similarity=0.222 Sum_probs=167.0
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCcc---ceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCC
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVA---TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK 112 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~---~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~ 112 (381)
..++.+.|+.+.++++|+.|++|++||+.... ......+.+|.+.|.++.|+|++. +|++|+.|+.|++|+....
T Consensus 41 V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~--~l~s~~~d~~i~~~~~~~~ 118 (340)
T 4aow_A 41 VTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQ--FALSGSWDGTLRLWDLTTG 118 (340)
T ss_dssp EEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTT
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCC--EEEEEcccccceEEeeccc
Confidence 35677788777899999999999999986432 345678899999999999999876 7889999988888887652
Q ss_pred eE-------------------------------------------EEEeccCCCCEEEEEEecCCC--EEEEEeCCCCEE
Q psy4650 113 TC-------------------------------------------VQTLEGHGQNISAVCFHPELP--IVITGSEDGSVR 147 (381)
Q Consensus 113 ~~-------------------------------------------~~~~~~~~~~v~~~~~~p~~~--~l~s~~~d~~i~ 147 (381)
.. .....+|...+.+++|++++. .+++++.|+.|+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~ 198 (340)
T 4aow_A 119 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 198 (340)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred ceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEE
Confidence 11 112346778899999988654 788999999999
Q ss_pred EEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecC------------------------------CCc
Q psy4650 148 VWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGR------------------------------EEP 197 (381)
Q Consensus 148 vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~------------------------------~~~ 197 (381)
+||+.+++....+.+|...|.+++|+|+++++++|+.||.+++|+.. +..
T Consensus 199 i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~ 278 (340)
T 4aow_A 199 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPS 278 (340)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTE
T ss_pred EEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCE
Confidence 99999999999999999999999999999999999999999998732 234
Q ss_pred eEEEecCCCEEEEEecCceeecccccCCc---cccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 198 AVSMDVNGCKIIWARHSEVQQANLKTMPE---VFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 198 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
+..||..++..+.....+.......++.. .++|+|||.+|++++.|+.+++|++...
T Consensus 279 i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 279 IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp EEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred EEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 44555555555554443332222222222 1678999999999999999999998754
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1e-24 Score=195.32 Aligned_cols=214 Identities=18% Similarity=0.239 Sum_probs=156.6
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCc-----cceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECC
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQV-----ATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 110 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~-----~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~ 110 (381)
...+.+.++ +.++++++.|++|++|++... ....+..+.+|.+.|.+++|+|++. +|++|+.|++|++||+.
T Consensus 61 v~~v~~sp~-~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~--~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 61 IRSVAWRPH-TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY--YLATCSRDKSVWIWETD 137 (330)
T ss_dssp EEEEEECTT-SSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSC--EEEEEETTSCEEEEECC
T ss_pred EEEEEECCC-CCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCC--EEEEEeCCCEEEEEecc
Confidence 456777776 569999999999999998431 2345678899999999999999876 89999999999999994
Q ss_pred C----CeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCC--eeeEEEecCCcceEEEEEcCC--CCEEEEE
Q psy4650 111 N----KTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTH--RLEISLTYGLERVWTISSLKG--SNNVAIG 182 (381)
Q Consensus 111 ~----~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~--~~~~~~~~~~~~v~~v~~~~~--~~~l~~~ 182 (381)
. .+++..+.+|...|.+++|+|++.+|++|+.|++|++||..++ .++..+.+|...|.+++|+|+ +..+++|
T Consensus 138 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 217 (330)
T 2hes_X 138 ESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSG 217 (330)
T ss_dssp TTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEE
T ss_pred CCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEE
Confidence 3 2567788999999999999999999999999999999999876 577888999999999999998 7789999
Q ss_pred eCCCeEEEEecCC--------------------Cc-----------eEEEecCCCEEEEEecCce--ee-cccccCCc--
Q psy4650 183 YDEGSVLLKVGRE--------------------EP-----------AVSMDVNGCKIIWARHSEV--QQ-ANLKTMPE-- 226 (381)
Q Consensus 183 ~~dg~v~i~~~~~--------------------~~-----------~~~~d~~~~~~~~~~~~~~--~~-~~~~~~~~-- 226 (381)
+.|+.+++|+... .. +++-..++...+|+..... .. ....++..
T Consensus 218 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~ 297 (330)
T 2hes_X 218 SDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYE 297 (330)
T ss_dssp ETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSC
T ss_pred eCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccce
Confidence 9999999985311 11 2222233445666654321 11 11112221
Q ss_pred --cccccC--CceEEeeehHHHHHhccCCC
Q psy4650 227 --VFENIT--AGVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 227 --~~~~~~--dg~~l~~~~~d~~~~~~d~~ 252 (381)
.++|+| ++..|++++.|+.+++|++.
T Consensus 298 v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 298 INVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 145666 67788888888888888764
No 21
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.2e-25 Score=196.34 Aligned_cols=196 Identities=13% Similarity=0.096 Sum_probs=150.1
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEee-cc-ccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCC---
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTL-YG-HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN--- 111 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l-~~-h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~--- 111 (381)
+.+.+.++ ++++++.|++|++|++..........+ .+ |.+.|.+++|+|++. +|++|+.|++|++||...
T Consensus 18 ~~~~~s~~---~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~--~las~s~D~~v~iw~~~~~~~ 92 (330)
T 2hes_X 18 WSFDFSQG---ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS--LLAAGSFDSTVSIWAKEESAD 92 (330)
T ss_dssp EEEEEETT---EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSS--EEEEEETTSCEEEEEC-----
T ss_pred eeeccCCC---EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCC--EEEEEeCCCcEEEEEcccCcC
Confidence 34555554 899999999999999865333445555 45 999999999999876 899999999999999853
Q ss_pred ----CeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCC----CeeeEEEecCCcceEEEEEcCCCCEEEEEe
Q psy4650 112 ----KTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGT----HRLEISLTYGLERVWTISSLKGSNNVAIGY 183 (381)
Q Consensus 112 ----~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~----~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~ 183 (381)
...+..+.+|...|.+++|+|++.+|++|+.|++|++||+.. .+.+..+.+|...|.+++|+|++.+|++|+
T Consensus 93 ~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s 172 (330)
T 2hes_X 93 RTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSS 172 (330)
T ss_dssp --CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred ccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEc
Confidence 356778899999999999999999999999999999999943 246677888999999999999999999999
Q ss_pred CCCeEEEEecCCCceEEEecCCC--EEEEEecCceeecccccCCccccccCC--ceEEeeehHHHHHhccCCCc
Q psy4650 184 DEGSVLLKVGREEPAVSMDVNGC--KIIWARHSEVQQANLKTMPEVFENITA--GVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 184 ~dg~v~i~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d--g~~l~~~~~d~~~~~~d~~~ 253 (381)
.|+.+++ ||..++ .++..+..+. ..+ ..++|+|+ +..+++++.|+....|++..
T Consensus 173 ~D~~i~i----------W~~~~~~~~~~~~~~~h~--~~v----~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 173 YDDTVRI----------WKDYDDDWECVAVLNGHE--GTV----WSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp TTSCEEE----------EEEETTEEEEEEEECCCS--SCE----EEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCCeEEE----------EECCCCCeeEEEEccCCC--CcE----EEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 9999999 544333 2222222111 011 11456777 77899999999999998754
No 22
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.94 E-value=2.2e-25 Score=196.65 Aligned_cols=202 Identities=18% Similarity=0.136 Sum_probs=158.8
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe--
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT-- 113 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~-- 113 (381)
..++.++++ +.++++|+.|++|++|++.......+.++.+|.++|.+++|+|+....+|++|+.|++|++||+.++.
T Consensus 12 V~~~~~s~~-g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~ 90 (297)
T 2pm7_B 12 IHDAVMDYY-GKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWS 90 (297)
T ss_dssp EEEEEECTT-SSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBC
T ss_pred eEEEEECCC-CCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceE
Confidence 346667766 56899999999999999865444677899999999999999875222389999999999999998874
Q ss_pred EEEEeccCCCCEEEEEEecC--CCEEEEEeCCCCEEEEeCCCCe--eeEEEecCCcceEEEEEcCC-------------C
Q psy4650 114 CVQTLEGHGQNISAVCFHPE--LPIVITGSEDGSVRVWHSGTHR--LEISLTYGLERVWTISSLKG-------------S 176 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~--~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~v~~~~~-------------~ 176 (381)
.+..+.+|...|.+++|+|+ +.++++++.|++|++||++++. ....+.+|...|.+++|+|+ +
T Consensus 91 ~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~ 170 (297)
T 2pm7_B 91 QIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 170 (297)
T ss_dssp CCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------C
T ss_pred EEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCc
Confidence 56678889999999999997 7899999999999999998763 24567789999999999997 5
Q ss_pred CEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCC---ccccccCC---ceEEeeehHHHHHhccC
Q psy4650 177 NNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMP---EVFENITA---GVVLTLSVHVTIKYRLD 250 (381)
Q Consensus 177 ~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d---g~~l~~~~~d~~~~~~d 250 (381)
++|++|+.|+.+++ ||..++...+... ..+.++. ..++|+|+ +.++++++.|+...+|+
T Consensus 171 ~~l~sgs~D~~v~l----------wd~~~~~~~~~~~-----~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd 235 (297)
T 2pm7_B 171 RKFVTGGADNLVKI----------WKYNSDAQTYVLE-----STLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWT 235 (297)
T ss_dssp CEEEEEETTSCEEE----------EEEETTTTEEEEE-----EEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred ceEEEEcCCCcEEE----------EEEcCCCceEEEE-----EEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEE
Confidence 79999999999999 5543332111100 0111111 12578888 48999999999999998
Q ss_pred CCc
Q psy4650 251 ISD 253 (381)
Q Consensus 251 ~~~ 253 (381)
+..
T Consensus 236 ~~~ 238 (297)
T 2pm7_B 236 QDN 238 (297)
T ss_dssp ESS
T ss_pred eCC
Confidence 764
No 23
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=1.2e-24 Score=199.74 Aligned_cols=211 Identities=23% Similarity=0.302 Sum_probs=166.4
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
..+.+.++ +.++++|+.|++|++||+.. ...+..+.+|...|.+++|+|++. +|++|+.|++|++||+.+++...
T Consensus 127 ~~v~~s~d-g~~l~s~~~d~~i~iwd~~~--~~~~~~~~~h~~~v~~~~~~p~~~--~l~s~s~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 127 RSVCFSPD-GKFLATGAEDRLIRIWDIEN--RKIVMILQGHEQDIYSLDYFPSGD--KLVSGSGDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp EEEEECTT-SSEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTTEEEE
T ss_pred EEEEECCC-CCEEEEEcCCCeEEEEECCC--CcEEEEEccCCCCEEEEEEcCCCC--EEEEecCCCcEEEEECCCCeeEE
Confidence 46667776 56899999999999999974 456778999999999999999877 89999999999999999998887
Q ss_pred EeccCCCCEEEEEEec-CCCEEEEEeCCCCEEEEeCCCCeeeEEE-------ecCCcceEEEEEcCCCCEEEEEeCCCeE
Q psy4650 117 TLEGHGQNISAVCFHP-ELPIVITGSEDGSVRVWHSGTHRLEISL-------TYGLERVWTISSLKGSNNVAIGYDEGSV 188 (381)
Q Consensus 117 ~~~~~~~~v~~~~~~p-~~~~l~s~~~d~~i~vwd~~~~~~~~~~-------~~~~~~v~~v~~~~~~~~l~~~~~dg~v 188 (381)
.+. +...+.+++|+| ++.++++|+.|+.|++||+.++..+..+ .+|...|.+++|+|+|.++++|+.||.+
T Consensus 202 ~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v 280 (393)
T 1erj_A 202 TLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 280 (393)
T ss_dssp EEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 776 567899999999 8899999999999999999999887766 5688899999999999999999999999
Q ss_pred EEEecCC-----------------------------------CceEEEecCCCEEEEEecCceeecccccCCcc---c--
Q psy4650 189 LLKVGRE-----------------------------------EPAVSMDVNGCKIIWARHSEVQQANLKTMPEV---F-- 228 (381)
Q Consensus 189 ~i~~~~~-----------------------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~-- 228 (381)
++|+-.. ..+++-..++...+|+.........+.++... +
T Consensus 281 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~ 360 (393)
T 1erj_A 281 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAV 360 (393)
T ss_dssp EEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEe
Confidence 9996321 01112222233455655443333333333221 2
Q ss_pred ----cccCCceEEeeehHHHHHhccCCCc
Q psy4650 229 ----ENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 229 ----~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
.+.|++..+++++.|+..++|++..
T Consensus 361 ~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 361 ANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred cCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 2446899999999999999998754
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=2.1e-25 Score=203.80 Aligned_cols=202 Identities=17% Similarity=0.183 Sum_probs=161.2
Q ss_pred eeeecCCCceEEEEEecCCeEEEecCCCccceeeEee-----ccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECC-C
Q psy4650 38 DITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTL-----YGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ-N 111 (381)
Q Consensus 38 ~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l-----~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~-~ 111 (381)
.+.+.++....+++|+.|++|++||+... ..+..+ .+|...|.++.|+|... .++++|+.|++|++||++ .
T Consensus 162 ~~~~~~~~~~~l~s~s~D~~i~~wd~~~~--~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~l~sgs~D~~v~~wd~~~~ 238 (380)
T 3iz6_a 162 SCQYVPDQETRLITGSGDQTCVLWDVTTG--QRISIFGSEFPSGHTADVLSLSINSLNA-NMFISGSCDTTVRLWDLRIT 238 (380)
T ss_dssp CCBCCSSSSSCEEEECTTSCEEEECTTTC--CEEEEECCCSSSSCCSCEEEEEECSSSC-CEEEEEETTSCEEEEETTTT
T ss_pred EEEEecCCCCEEEEECCCCcEEEEEcCCC--cEEEEeecccCCCCccCeEEEEeecCCC-CEEEEEECCCeEEEEECCCC
Confidence 34455555668999999999999999753 333444 68999999999987332 389999999999999997 4
Q ss_pred CeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCc-------ceEEEEEcCCCCEEEEEeC
Q psy4650 112 KTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLE-------RVWTISSLKGSNNVAIGYD 184 (381)
Q Consensus 112 ~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-------~v~~v~~~~~~~~l~~~~~ 184 (381)
+..+..+.+|.+.|.+++|+|++.++++|+.|++|++||++++..+..+..+.. .|.+++|+|+|.++++|+.
T Consensus 239 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~ 318 (380)
T 3iz6_a 239 SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS 318 (380)
T ss_dssp CCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT
T ss_pred CcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC
Confidence 577888999999999999999999999999999999999999998888765432 4889999999999999999
Q ss_pred CCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 185 EGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 185 dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
||.+++ ||...+..+........ .. .+....++|+|||..|++++.|+...+|++...
T Consensus 319 dg~i~v----------wd~~~~~~~~~~~~~~~-~h-~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 319 NGDCYV----------WDTLLAEMVLNLGTLQN-SH-EGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp TSCEEE----------EETTTCCEEEEECCSCS-SC-CCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred CCCEEE----------EECCCCceEEEEecccC-CC-CCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 999999 77766665554421100 00 111112578999999999999999999998754
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.94 E-value=2.2e-25 Score=201.87 Aligned_cols=200 Identities=16% Similarity=0.162 Sum_probs=164.3
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
..+.+.++ +.++++++.|++|++||+.. ...+..+.+|.+.|.+++|+|++.. ++++++.|++|++||+.++++..
T Consensus 143 ~~v~~spd-g~~l~sgs~dg~v~iwd~~~--~~~~~~~~~h~~~v~~v~~s~~~~~-~~~s~~~dg~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 143 KTLSVFSD-GTQAVSGGKDFSVKVWDLSQ--KAVLKSYNAHSSEVNCVAACPGKDT-IFLSCGEDGRILLWDTRKPKPAT 218 (357)
T ss_dssp EEEEECSS-SSEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEECTTCSS-CEEEEETTSCEEECCTTSSSCBC
T ss_pred EEEEECCC-CCEEEEEeCCCeEEEEECCC--CcEEEEEcCCCCCEEEEEEccCCCc-eeeeeccCCceEEEECCCCceee
Confidence 45666776 56899999999999999974 5677889999999999999998753 78999999999999999987665
Q ss_pred Ee--ccCCCCEEEEEEecCC-CEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCC-CEEEEEeCCCeEEEEe
Q psy4650 117 TL--EGHGQNISAVCFHPEL-PIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGS-NNVAIGYDEGSVLLKV 192 (381)
Q Consensus 117 ~~--~~~~~~v~~~~~~p~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~l~~~~~dg~v~i~~ 192 (381)
.+ ..|...+.+++|+|++ .++++|+.|+.|++||+++++.+..+.+|...|.+++|+|++ ++|++|+.||.+++
T Consensus 219 ~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~i-- 296 (357)
T 4g56_B 219 RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAV-- 296 (357)
T ss_dssp BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEE--
T ss_pred eeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEE--
Confidence 54 4567789999999975 588999999999999999999999999999999999999987 57999999999999
Q ss_pred cCCCceEEEecCCCEEEEEecCceeecccccCCccccccC-CceEEeeehHHHHHhccCCCcChhH
Q psy4650 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENIT-AGVVLTLSVHVTIKYRLDISDSHRS 257 (381)
Q Consensus 193 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~d~~~~~~d~~~~~~~ 257 (381)
||..+++++...... ..+ ..++|+| |+..+++++.|+.++.|++....+.
T Consensus 297 --------wd~~~~~~~~~~~H~---~~V----~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 297 --------LDADFSEVFRDLSHR---DFV----TGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp --------ECTTSCEEEEECCCS---SCE----EEEEECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred --------EECCCCcEeEECCCC---CCE----EEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 888777766543211 111 1257887 8999999999999999998765444
No 26
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.93 E-value=3.3e-25 Score=195.53 Aligned_cols=202 Identities=14% Similarity=0.137 Sum_probs=156.7
Q ss_pred eeeeecCC-CceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe--
Q psy4650 37 VDITTNKD-MIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT-- 113 (381)
Q Consensus 37 ~~i~~~~~-~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~-- 113 (381)
..+.+.++ .+.++++++.|++|++||+.......+..+.+|...|.+++|+|+....+|++|+.|++|++||+.++.
T Consensus 57 ~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~ 136 (297)
T 2pm7_B 57 WRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT 136 (297)
T ss_dssp EEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB
T ss_pred EEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce
Confidence 45555443 367999999999999999975433456778899999999999997323489999999999999998763
Q ss_pred EEEEeccCCCCEEEEEEecC-------------CCEEEEEeCCCCEEEEeCCCCe----eeEEEecCCcceEEEEEcCCC
Q psy4650 114 CVQTLEGHGQNISAVCFHPE-------------LPIVITGSEDGSVRVWHSGTHR----LEISLTYGLERVWTISSLKGS 176 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~-------------~~~l~s~~~d~~i~vwd~~~~~----~~~~~~~~~~~v~~v~~~~~~ 176 (381)
....+.+|...|.+++|+|+ +..|++|+.|++|++||++++. ....+.+|...|.+++|+|++
T Consensus 137 ~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 137 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 216 (297)
T ss_dssp CCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred eeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC
Confidence 24567889999999999997 4699999999999999998765 566788999999999999985
Q ss_pred ---CEEEEEeCCCeEEEEecCCCceEEEecCCCEEEE---EecCceeecccccCCccccccCCceEEeeehHHHHHhccC
Q psy4650 177 ---NNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIW---ARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLD 250 (381)
Q Consensus 177 ---~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d 250 (381)
.++++++.|+.+++| |..++...| ..... ........++|+|+|..|++++.|+..++|+
T Consensus 217 ~~~~~las~s~D~~v~iW----------d~~~~~~~~~~~~~~~~----~~~~~v~~~~~s~~g~~las~~~D~~v~lw~ 282 (297)
T 2pm7_B 217 LLRSYMASVSQDRTCIIW----------TQDNEQGPWKKTLLKEE----KFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (297)
T ss_dssp SSSEEEEEEETTSCEEEE----------EESSTTSCCEEEESSSS----CCSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred CCceEEEEEECCCcEEEE----------EeCCCCCccceeeeecc----cCCCcEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 799999999999995 443321000 01000 0011111257899999999999999999998
Q ss_pred CC
Q psy4650 251 IS 252 (381)
Q Consensus 251 ~~ 252 (381)
..
T Consensus 283 ~~ 284 (297)
T 2pm7_B 283 EN 284 (297)
T ss_dssp EC
T ss_pred EC
Confidence 65
No 27
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=4.4e-24 Score=192.25 Aligned_cols=210 Identities=15% Similarity=0.240 Sum_probs=162.7
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
..+.+.++ ..++++++.|++|++||+.. ...+..+.+|.+.|.+++|+|++. +|++|+.|++|++||+.... ..
T Consensus 80 ~~~~~~~~-~~~l~s~s~D~~v~lwd~~~--~~~~~~~~~h~~~v~~v~~sp~~~--~l~s~~~d~~i~~wd~~~~~-~~ 153 (343)
T 2xzm_R 80 SDLALSQE-NCFAISSSWDKTLRLWDLRT--GTTYKRFVGHQSEVYSVAFSPDNR--QILSAGAEREIKLWNILGEC-KF 153 (343)
T ss_dssp EEEEECSS-TTEEEEEETTSEEEEEETTS--SCEEEEEECCCSCEEEEEECSSTT--EEEEEETTSCEEEEESSSCE-EE
T ss_pred EEEEECCC-CCEEEEEcCCCcEEEEECCC--CcEEEEEcCCCCcEEEEEECCCCC--EEEEEcCCCEEEEEeccCCc-ee
Confidence 45556665 56899999999999999974 456778999999999999999877 89999999999999998443 33
Q ss_pred Ee---ccCCCCEEEEEEecCC----------CEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEe
Q psy4650 117 TL---EGHGQNISAVCFHPEL----------PIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGY 183 (381)
Q Consensus 117 ~~---~~~~~~v~~~~~~p~~----------~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~ 183 (381)
.. .+|...|.+++|+|++ .++++++.|+.|++|| ..+.....+.+|...|.+++|+|+|++|++|+
T Consensus 154 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs 232 (343)
T 2xzm_R 154 SSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGG 232 (343)
T ss_dssp ECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred eeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEc
Confidence 33 3788999999999987 6899999999999999 45677788889999999999999999999999
Q ss_pred CCCeEEEEecCC--Cc---------e--EEEe---------cCCCEEEEEecCceeec--ccc-----------cCC---
Q psy4650 184 DEGSVLLKVGRE--EP---------A--VSMD---------VNGCKIIWARHSEVQQA--NLK-----------TMP--- 225 (381)
Q Consensus 184 ~dg~v~i~~~~~--~~---------~--~~~d---------~~~~~~~~~~~~~~~~~--~~~-----------~~~--- 225 (381)
.||.+++|+... .. + +.|. .+.+..+|......... .+. ++.
T Consensus 233 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 312 (343)
T 2xzm_R 233 KDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQC 312 (343)
T ss_dssp TTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCE
T ss_pred CCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCce
Confidence 999999998521 11 1 1222 23455667654322211 111 111
Q ss_pred ccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 226 EVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 226 ~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
..++|+|+|..|++++.|+.++.|++..
T Consensus 313 ~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 313 TSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp EEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred EEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 1268899999999999999888888643
No 28
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=2.7e-24 Score=208.59 Aligned_cols=155 Identities=17% Similarity=0.173 Sum_probs=137.3
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
...+.+.+++...+++++.|++|++|+.. ....+..+.+|.+.|.+++|+|++. +|++|+.|++|++||..+++..
T Consensus 150 v~~v~f~p~~~~~l~s~s~D~~v~lwd~~--~~~~~~~l~~H~~~V~~v~fspdg~--~las~s~D~~i~lwd~~~g~~~ 225 (611)
T 1nr0_A 150 MNSVDFKPSRPFRIISGSDDNTVAIFEGP--PFKFKSTFGEHTKFVHSVRYNPDGS--LFASTGGDGTIVLYNGVDGTKT 225 (611)
T ss_dssp EEEEEECSSSSCEEEEEETTSCEEEEETT--TBEEEEEECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTCCEE
T ss_pred ceEEEECCCCCeEEEEEeCCCeEEEEECC--CCeEeeeeccccCceEEEEECCCCC--EEEEEECCCcEEEEECCCCcEe
Confidence 45677778766679999999999999975 3456788999999999999999877 8999999999999999999888
Q ss_pred EEec-------cCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEE-----------------------------
Q psy4650 116 QTLE-------GHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEIS----------------------------- 159 (381)
Q Consensus 116 ~~~~-------~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~----------------------------- 159 (381)
..+. +|.+.|.+++|+|++.+|++++.|++|++||+.+++....
T Consensus 226 ~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~ 305 (611)
T 1nr0_A 226 GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGF 305 (611)
T ss_dssp EECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCC
T ss_pred eeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCc
Confidence 8884 7999999999999999999999999999999998765443
Q ss_pred --------------EecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecC
Q psy4650 160 --------------LTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGR 194 (381)
Q Consensus 160 --------------~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~ 194 (381)
+.+|...|.+++|+|+|+++++++.||.+++|+..
T Consensus 306 i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 306 INFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIS 354 (611)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECC
Confidence 34688899999999999999999999999999743
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.93 E-value=9.1e-25 Score=199.57 Aligned_cols=203 Identities=16% Similarity=0.241 Sum_probs=156.0
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccc-------------------------------------
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEK------------------------------------- 79 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~------------------------------------- 79 (381)
+.+.+.++ +.++++|+.|++|++||+.. ......+.+|..
T Consensus 70 ~~~~~sp~-~~~l~s~s~D~~v~iWd~~~--~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~ 146 (380)
T 3iz6_a 70 YSLDWTPE-KNWIVSASQDGRLIVWNALT--SQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGN 146 (380)
T ss_dssp EEEEECTT-SSCEEEEETTSEEEEEETTT--TEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCS
T ss_pred EEEEEcCC-CCEEEEEeCCCeEEEEECCC--CccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCC
Confidence 46667776 56899999999999999863 233444444444
Q ss_pred ------------cEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEe-----ccCCCCEEEEEEec-CCCEEEEEe
Q psy4650 80 ------------GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL-----EGHGQNISAVCFHP-ELPIVITGS 141 (381)
Q Consensus 80 ------------~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~-----~~~~~~v~~~~~~p-~~~~l~s~~ 141 (381)
.|.++.|+|++. ..|++|+.|++|++||+.++..+..+ .+|...|.+++|+| ++..+++|+
T Consensus 147 ~~~~~~~~gh~~~v~~~~~~~~~~-~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs 225 (380)
T 3iz6_a 147 MPVSRVLTGHKGYASSCQYVPDQE-TRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGS 225 (380)
T ss_dssp STTCCBCCCCSSCCCCCBCCSSSS-SCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEE
T ss_pred ccceeeccCCCcceEEEEEecCCC-CEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEE
Confidence 444445544332 25788888888888888888877766 67899999999987 778999999
Q ss_pred CCCCEEEEeCC-CCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeec-
Q psy4650 142 EDGSVRVWHSG-THRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQA- 219 (381)
Q Consensus 142 ~d~~i~vwd~~-~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~- 219 (381)
.|++|++||++ ++..+..+.+|...|.+++|+|++.++++|+.||.+++ ||..++..+.....+....
T Consensus 226 ~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~l----------wd~~~~~~~~~~~~~~~~~~ 295 (380)
T 3iz6_a 226 CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRL----------FDMRTGHQLQVYNREPDRND 295 (380)
T ss_dssp TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEE----------EETTTTEEEEEECCCCSSSC
T ss_pred CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEE----------EECCCCcEEEEecccccccc
Confidence 99999999998 55778889999999999999999999999999999999 8887777665543322111
Q ss_pred ccccCCccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 220 NLKTMPEVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 220 ~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
........++|+|+|..+++++.++..+.||...
T Consensus 296 ~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~ 329 (380)
T 3iz6_a 296 NELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLL 329 (380)
T ss_dssp CSSCSCSEEEECSSSSEEEEECTTSCEEEEETTT
T ss_pred cccCceEEEEECCCCCEEEEEECCCCEEEEECCC
Confidence 0011111268899999999999999999999754
No 30
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.93 E-value=8.4e-24 Score=187.71 Aligned_cols=199 Identities=20% Similarity=0.316 Sum_probs=166.6
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
..+.+.++ +.++++++.|+.|++||+.. ...+..+.+|...|.++.|+|++. ++++|+.|++|++||+.+++.+.
T Consensus 69 ~~~~~~~~-~~~l~s~~~d~~i~vwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~d~~i~iwd~~~~~~~~ 143 (312)
T 4ery_A 69 SDVAWSSD-SNLLVSASDDKTLKIWDVSS--GKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVKTGKCLK 143 (312)
T ss_dssp EEEEECTT-SSEEEEEETTSEEEEEETTT--CCEEEEEECCSSCEEEEEECSSSS--EEEEEETTSCEEEEETTTCCEEE
T ss_pred EEEEEcCC-CCEEEEECCCCEEEEEECCC--CcEEEEEcCCCCCEEEEEEcCCCC--EEEEEeCCCcEEEEECCCCEEEE
Confidence 45666666 56999999999999999974 456788999999999999999876 89999999999999999999999
Q ss_pred EeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEec-CCcceEEEEEcCCCCEEEEEeCCCeEEEEecCC
Q psy4650 117 TLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTY-GLERVWTISSLKGSNNVAIGYDEGSVLLKVGRE 195 (381)
Q Consensus 117 ~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~ 195 (381)
.+..|..+|.+++|+|++..+++++.|+.|++||+++++.+..+.. +...+..++|+|++.++++++.||.+++
T Consensus 144 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i----- 218 (312)
T 4ery_A 144 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL----- 218 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEE-----
T ss_pred EecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEE-----
Confidence 9999999999999999999999999999999999999988877643 5567999999999999999999999999
Q ss_pred CceEEEecCCCEEEEEecCceeecccccCCcccc-ccCCceEEeeehHHHHHhccCCCcC
Q psy4650 196 EPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFE-NITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 196 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
||..++..+.....+....... . .. ..+++.++++++.++.++.|++...
T Consensus 219 -----wd~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 219 -----WDYSKGKCLKTYTGHKNEKYCI--F--ANFSVTGGKWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp -----EETTTTEEEEEECSSCCSSSCC--C--EEEECSSSCEEEECCTTSCEEEEETTTC
T ss_pred -----EECCCCcEEEEEEecCCceEEE--E--EEEEeCCCcEEEEECCCCEEEEEECCCc
Confidence 7887777766554332111110 0 11 2367899999999999999998643
No 31
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.92 E-value=2.3e-24 Score=198.38 Aligned_cols=199 Identities=16% Similarity=0.260 Sum_probs=165.3
Q ss_pred eeecCCCceEEEEEecCCeEEEecCCCccc--eeeEeeccccccEEEEEeee-CCCccEEEEEcCCCeEEEEECCCC---
Q psy4650 39 ITTNKDMIEYKISYQESSRVKAFNPIQVAT--LILKTLYGHEKGVNCVDYYH-GGDKPYLISGADDRLVKIWDYQNK--- 112 (381)
Q Consensus 39 i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~--~~~~~l~~h~~~v~~~~~~~-~~~~~~l~s~~~d~~v~vwd~~~~--- 112 (381)
+..+++...++++++.+|.|++|++..... ..+..+.+|.+.|.+++|+| ++. +|++|+.||+|++||+.++
T Consensus 40 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~--~l~s~s~dg~v~vw~~~~~~~~ 117 (402)
T 2aq5_A 40 CAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDN--VIASGSEDCTVMVWEIPDGGLV 117 (402)
T ss_dssp EEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTT--EEEEEETTSEEEEEECCTTCCS
T ss_pred EEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCC--EEEEEeCCCeEEEEEccCCCCc
Confidence 445566566777889999999999854222 23456789999999999999 665 8999999999999999987
Q ss_pred ----eEEEEeccCCCCEEEEEEecCC-CEEEEEeCCCCEEEEeCCCCeeeEEE--ecCCcceEEEEEcCCCCEEEEEeCC
Q psy4650 113 ----TCVQTLEGHGQNISAVCFHPEL-PIVITGSEDGSVRVWHSGTHRLEISL--TYGLERVWTISSLKGSNNVAIGYDE 185 (381)
Q Consensus 113 ----~~~~~~~~~~~~v~~~~~~p~~-~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~~~~v~~v~~~~~~~~l~~~~~d 185 (381)
.++..+.+|...|.+++|+|++ ..+++++.|+.|++||+.+++....+ ..|...|.+++|+|++.++++++.|
T Consensus 118 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 197 (402)
T 2aq5_A 118 LPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD 197 (402)
T ss_dssp SCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT
T ss_pred cccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC
Confidence 5678889999999999999998 59999999999999999999999999 7899999999999999999999999
Q ss_pred CeEEEEecCCCceEEEecCCCEEEEEe-cCceeecccccCCccccccCCceEEeee---hHHHHHhccCCCcC
Q psy4650 186 GSVLLKVGREEPAVSMDVNGCKIIWAR-HSEVQQANLKTMPEVFENITAGVVLTLS---VHVTIKYRLDISDS 254 (381)
Q Consensus 186 g~v~i~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dg~~l~~~---~~d~~~~~~d~~~~ 254 (381)
|.+++ ||..++..+... ..+.. .....+.|+|+|.+++++ ..++....||+...
T Consensus 198 ~~i~i----------wd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 198 KRVRV----------IEPRKGTVVAEKDRPHEG-----TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHL 255 (402)
T ss_dssp SEEEE----------EETTTTEEEEEEECSSCS-----SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBC
T ss_pred CcEEE----------EeCCCCceeeeeccCCCC-----CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccc
Confidence 99999 888888777655 22211 111125678999999998 78888899998654
No 32
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.92 E-value=8.5e-24 Score=208.16 Aligned_cols=200 Identities=14% Similarity=0.202 Sum_probs=164.1
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCcc---ceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVA---TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~---~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
.++...++...++++|+.|++|++|++.... ......+.+|.+.|.+++|+|++. +|++|+.|++|++||+.++.
T Consensus 386 ~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~--~l~sgs~Dg~v~vwd~~~~~ 463 (694)
T 3dm0_A 386 TAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQ--FALSGSWDGELRLWDLAAGV 463 (694)
T ss_dssp EEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTTE
T ss_pred EEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCC--EEEEEeCCCcEEEEECCCCc
Confidence 4555666667899999999999999986422 234567899999999999999876 89999999999999999999
Q ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEE---ecCCcceEEEEEcCCC--CEEEEEeCCCeE
Q psy4650 114 CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL---TYGLERVWTISSLKGS--NNVAIGYDEGSV 188 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~~~~v~~v~~~~~~--~~l~~~~~dg~v 188 (381)
....+.+|...|.+++|+|++..+++|+.|++|++||.......... .+|...|.+++|+|++ ..+++|+.||.+
T Consensus 464 ~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v 543 (694)
T 3dm0_A 464 STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTV 543 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCE
T ss_pred ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeE
Confidence 99999999999999999999999999999999999998765433322 3577889999999986 589999999999
Q ss_pred EEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 189 LLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 189 ~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
++ ||..++........+.. . ...++++|+|..+++++.|+.+++||+...
T Consensus 544 ~v----------wd~~~~~~~~~~~~h~~--~----v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 544 KV----------WNLSNCKLRSTLAGHTG--Y----VSTVAVSPDGSLCASGGKDGVVLLWDLAEG 593 (694)
T ss_dssp EE----------EETTTCCEEEEECCCSS--C----EEEEEECTTSSEEEEEETTSBCEEEETTTT
T ss_pred EE----------EECCCCcEEEEEcCCCC--C----EEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 99 66666555443332211 1 111578899999999999999999998654
No 33
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.92 E-value=1e-23 Score=186.62 Aligned_cols=164 Identities=23% Similarity=0.309 Sum_probs=139.6
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
..+.+.++ ..++++|+.|++|++||+.. .......+.+|...|.+++|+|.+. ..|++|+.|++|++||+.++....
T Consensus 101 ~~~~~~~~-~~~l~sgs~D~~v~lWd~~~-~~~~~~~~~~h~~~v~~v~~~p~~~-~~l~sgs~D~~v~iwd~~~~~~~~ 177 (304)
T 2ynn_A 101 RSIAVHPT-KPYVLSGSDDLTVKLWNWEN-NWALEQTFEGHEHFVMCVAFNPKDP-STFASGCLDRTVKVWSLGQSTPNF 177 (304)
T ss_dssp EEEEECSS-SSEEEEEETTSCEEEEEGGG-TTEEEEEECCCCSCEEEEEECTTCT-TEEEEEETTSEEEEEETTCSSCSE
T ss_pred EEEEEcCC-CCEEEEECCCCeEEEEECCC-CcchhhhhcccCCcEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCccc
Confidence 45666766 56899999999999999864 2345677899999999999999433 289999999999999998876655
Q ss_pred Ee-ccCCCCEEEEEEec--CCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEec
Q psy4650 117 TL-EGHGQNISAVCFHP--ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVG 193 (381)
Q Consensus 117 ~~-~~~~~~v~~~~~~p--~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~ 193 (381)
.+ .+|...+..+.|+| ++.++++|+.|++|++||+++++.+..+.+|...|.+++|+|++.++++|+.||.+++
T Consensus 178 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~i--- 254 (304)
T 2ynn_A 178 TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKI--- 254 (304)
T ss_dssp EEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE---
T ss_pred eeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEE---
Confidence 55 45668899999987 6779999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEecCCCEEEEEec
Q psy4650 194 REEPAVSMDVNGCKIIWARH 213 (381)
Q Consensus 194 ~~~~~~~~d~~~~~~~~~~~ 213 (381)
||..++++.....
T Consensus 255 -------Wd~~~~~~~~~~~ 267 (304)
T 2ynn_A 255 -------WNSSTYKVEKTLN 267 (304)
T ss_dssp -------EETTTCCEEEEEC
T ss_pred -------EECCCCceeeecc
Confidence 7776666655443
No 34
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.92 E-value=2.6e-23 Score=189.89 Aligned_cols=213 Identities=11% Similarity=0.026 Sum_probs=163.1
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
...+.+.++...++++++.|++|++||+.......+....+|...|.+++|+|++. +|++|+.|+.|++||+ ++..+
T Consensus 121 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~i~d~-~~~~~ 197 (383)
T 3ei3_B 121 ITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQ--MLATGDSTGRLLLLGL-DGHEI 197 (383)
T ss_dssp EEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTT--EEEEEETTSEEEEEET-TSCEE
T ss_pred eeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCC--EEEEECCCCCEEEEEC-CCCEE
Confidence 34666777557899999999999999997422222222344558899999999876 8999999999999999 57788
Q ss_pred EEeccCCCCEEEEEEecCCC-EEEEEeCCCCEEEEeCCC----CeeeEEEecCCcceEEEEEcC-CCCEEEEEeCCCeEE
Q psy4650 116 QTLEGHGQNISAVCFHPELP-IVITGSEDGSVRVWHSGT----HRLEISLTYGLERVWTISSLK-GSNNVAIGYDEGSVL 189 (381)
Q Consensus 116 ~~~~~~~~~v~~~~~~p~~~-~l~s~~~d~~i~vwd~~~----~~~~~~~~~~~~~v~~v~~~~-~~~~l~~~~~dg~v~ 189 (381)
..+.+|...|.+++|+|++. ++++|+.|+.|++||+++ +..+..+ .|...|.+++|+| ++.++++++.||.++
T Consensus 198 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 198 FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEE
T ss_pred EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEE
Confidence 89999999999999999999 999999999999999997 6666666 6889999999999 999999999999999
Q ss_pred EEecCCCce------------------------------EEEe--------cCCCEEEEEecCceeecccccC-----Cc
Q psy4650 190 LKVGREEPA------------------------------VSMD--------VNGCKIIWARHSEVQQANLKTM-----PE 226 (381)
Q Consensus 190 i~~~~~~~~------------------------------~~~d--------~~~~~~~~~~~~~~~~~~~~~~-----~~ 226 (381)
+|+...... +.+. .++...+|+.........+.+. ..
T Consensus 277 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~ 356 (383)
T 3ei3_B 277 VYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIIS 356 (383)
T ss_dssp EEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCC
T ss_pred EEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEE
Confidence 997432100 1111 1234455655444333333321 11
Q ss_pred cccccCCceEEeeehHHHHHhccCCCc
Q psy4650 227 VFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 227 ~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
.++|+|+|.++++++ ++.+.+|++..
T Consensus 357 ~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 357 LNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred EEEEecCccEEEEec-CCcEEEEecCC
Confidence 147899999999996 78888898753
No 35
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.92 E-value=1.3e-23 Score=206.92 Aligned_cols=152 Identities=24% Similarity=0.354 Sum_probs=133.6
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
..+...++ +.++++|+.|++|++||+.. ......+.+|.+.|.+++|+|++. +|++|+.|++|++||........
T Consensus 434 ~~v~~s~~-g~~l~sgs~Dg~v~vwd~~~--~~~~~~~~~h~~~v~~~~~s~~~~--~l~s~s~D~~i~iwd~~~~~~~~ 508 (694)
T 3dm0_A 434 EDVVLSSD-GQFALSGSWDGELRLWDLAA--GVSTRRFVGHTKDVLSVAFSLDNR--QIVSASRDRTIKLWNTLGECKYT 508 (694)
T ss_dssp EEEEECTT-SSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEECTTSS--CEEEEETTSCEEEECTTSCEEEE
T ss_pred EEEEECCC-CCEEEEEeCCCcEEEEECCC--CcceeEEeCCCCCEEEEEEeCCCC--EEEEEeCCCEEEEEECCCCccee
Confidence 45556665 56999999999999999974 456778899999999999999877 79999999999999987654333
Q ss_pred Ee---ccCCCCEEEEEEecCC--CEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy4650 117 TL---EGHGQNISAVCFHPEL--PIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLK 191 (381)
Q Consensus 117 ~~---~~~~~~v~~~~~~p~~--~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~ 191 (381)
.. .+|...|.+++|+|++ ..+++|+.|++|++||+++++....+.+|...|.+++|+|+++++++|+.||.+++|
T Consensus 509 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iw 588 (694)
T 3dm0_A 509 ISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW 588 (694)
T ss_dssp ECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEE
T ss_pred eccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 32 4688899999999987 589999999999999999999999999999999999999999999999999999998
Q ss_pred ec
Q psy4650 192 VG 193 (381)
Q Consensus 192 ~~ 193 (381)
+.
T Consensus 589 d~ 590 (694)
T 3dm0_A 589 DL 590 (694)
T ss_dssp ET
T ss_pred EC
Confidence 73
No 36
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=4.2e-24 Score=197.41 Aligned_cols=195 Identities=16% Similarity=0.196 Sum_probs=161.0
Q ss_pred ecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEecc
Q psy4650 41 TNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEG 120 (381)
Q Consensus 41 ~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~ 120 (381)
..++ +.++++++.||.|++|++.. ......+.+|.+.|.+++|+|++. +|++|+.|++|++||+.+++.+..+.+
T Consensus 105 ~~~~-~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~s~d~~i~iwd~~~~~~~~~~~~ 179 (420)
T 3vl1_A 105 AKLQ-MRRFILGTTEGDIKVLDSNF--NLQREIDQAHVSEITKLKFFPSGE--ALISSSQDMQLKIWSVKDGSNPRTLIG 179 (420)
T ss_dssp ECSS-SCEEEEEETTSCEEEECTTS--CEEEEETTSSSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTCCCCEEEEC
T ss_pred EecC-CCEEEEEECCCCEEEEeCCC--cceeeecccccCccEEEEECCCCC--EEEEEeCCCeEEEEeCCCCcCceEEcC
Confidence 3444 56899999999999999873 455667789999999999999876 899999999999999999999999999
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEec---CCcceEE---------------------EEEcCCC
Q psy4650 121 HGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTY---GLERVWT---------------------ISSLKGS 176 (381)
Q Consensus 121 ~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~---~~~~v~~---------------------v~~~~~~ 176 (381)
|...|.+++|+|++..+++++.|+.|++||+.+++....+.. +...+.+ ++|+|++
T Consensus 180 h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (420)
T 3vl1_A 180 HRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG 259 (420)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC
Confidence 999999999999999999999999999999999999988875 3334444 4557899
Q ss_pred CEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCce-EEeeehHHHHHhccCCCcCh
Q psy4650 177 NNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGV-VLTLSVHVTIKYRLDISDSH 255 (381)
Q Consensus 177 ~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~-~l~~~~~d~~~~~~d~~~~~ 255 (381)
.++++|+.||.+++ ||..++..+....... ......++|+|++. .+++++.++..+.||+....
T Consensus 260 ~~l~~~~~dg~i~i----------~d~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 260 KYVIAGHVSGVITV----------HNVFSKEQTIQLPSKF-----TCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp EEEEEEETTSCEEE----------EETTTCCEEEEECCTT-----SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred CEEEEEcCCCeEEE----------EECCCCceeEEccccc-----CCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 99999999999999 7777766555543211 11111257889998 99999999999999987653
No 37
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.92 E-value=3.2e-23 Score=190.16 Aligned_cols=202 Identities=20% Similarity=0.282 Sum_probs=157.3
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeecccc------------------ccEEEEEeeeCCCccEEEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHE------------------KGVNCVDYYHGGDKPYLIS 97 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~------------------~~v~~~~~~~~~~~~~l~s 97 (381)
..++.+.++ +.++++++ ++++++|+... ...+..+.+|. ..|.+++|+|++. +|++
T Consensus 67 V~~v~fspd-g~~la~g~-~~~v~i~~~~~--g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~--~l~s 140 (393)
T 1erj_A 67 VCCVKFSND-GEYLATGC-NKTTQVYRVSD--GSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK--FLAT 140 (393)
T ss_dssp CCEEEECTT-SSEEEEEC-BSCEEEEETTT--CCEEEEECC-----------------CCCCBEEEEEECTTSS--EEEE
T ss_pred EEEEEECCC-CCEEEEEc-CCcEEEEEecC--CCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC--EEEE
Confidence 346667777 55788766 68999999864 33445555443 2499999999877 8999
Q ss_pred EcCCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcC-CC
Q psy4650 98 GADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLK-GS 176 (381)
Q Consensus 98 ~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~-~~ 176 (381)
|+.|++|++||+.+++.+..+.+|...|.+++|+|++..+++++.|++|++||+.+++....+. +...+.+++|+| ++
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~ 219 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDG 219 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTC
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999999999887776 557899999999 89
Q ss_pred CEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeec-ccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 177 NNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQA-NLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 177 ~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
.++++|+.||.+++ ||..++..+.......... ........++|+|+|..+++++.|+..+.||+...
T Consensus 220 ~~l~~~s~d~~v~i----------wd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 220 KYIAAGSLDRAVRV----------WDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp CEEEEEETTSCEEE----------EETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred CEEEEEcCCCcEEE----------EECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 99999999999999 6666665554432211100 00011112678899999999999999999998653
No 38
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.92 E-value=9.7e-25 Score=194.30 Aligned_cols=201 Identities=17% Similarity=0.118 Sum_probs=155.9
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCC--e
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK--T 113 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~--~ 113 (381)
..++.+.++ +.++++|+.|++|++||+.......+..+.+|.+.|.+++|+|+....+|++|+.|++|++||+.++ .
T Consensus 16 V~~v~~s~~-g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~ 94 (316)
T 3bg1_A 16 IHDAQMDYY-GTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWE 94 (316)
T ss_dssp EEEEEECGG-GCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCC
T ss_pred EEEeeEcCC-CCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcce
Confidence 345666665 5699999999999999986543446778999999999999986422237999999999999999887 3
Q ss_pred EEEEeccCCCCEEEEEEecC--CCEEEEEeCCCCEEEEeCCCCee---eEEEecCCcceEEEEEcCC-------------
Q psy4650 114 CVQTLEGHGQNISAVCFHPE--LPIVITGSEDGSVRVWHSGTHRL---EISLTYGLERVWTISSLKG------------- 175 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~--~~~l~s~~~d~~i~vwd~~~~~~---~~~~~~~~~~v~~v~~~~~------------- 175 (381)
....+.+|...|.+++|+|+ +.++++|+.|++|++||+.++.. ...+.+|...+.++.|+|+
T Consensus 95 ~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~ 174 (316)
T 3bg1_A 95 KSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQ 174 (316)
T ss_dssp EEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSC
T ss_pred EEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccccccc
Confidence 56778899999999999998 77999999999999999987632 3445678889999999997
Q ss_pred ----CCEEEEEeCCCeEEEEecCCCceEEEecCCC---EEEEEecCceeecccccCCccccccCCc----eEEeeehHHH
Q psy4650 176 ----SNNVAIGYDEGSVLLKVGREEPAVSMDVNGC---KIIWARHSEVQQANLKTMPEVFENITAG----VVLTLSVHVT 244 (381)
Q Consensus 176 ----~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~dg----~~l~~~~~d~ 244 (381)
+.++++|+.|+.+++ ||..++ .++..+..+ ...+ ..++|+|++ ..+++++.|+
T Consensus 175 ~~~~~~~l~sgs~D~~v~l----------Wd~~~~~~~~~~~~l~~h--~~~V----~~v~~sp~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 175 KPNYIKRFASGGCDNLIKL----------WKEEEDGQWKEEQKLEAH--SDWV----RDVAWAPSIGLPTSTIASCSQDG 238 (316)
T ss_dssp CCCCCCBEECCBTTSBCCE----------EEECTTSCEEEEECCBCC--SSCE----EEEECCCCSSCSCCEEEEEETTC
T ss_pred CccccceEEEecCCCeEEE----------EEeCCCCccceeeecccC--CCce----EEEEecCCCCCCCceEEEEcCCC
Confidence 468999999999999 555332 122111111 0111 115678886 8899999999
Q ss_pred HHhccCCCc
Q psy4650 245 IKYRLDISD 253 (381)
Q Consensus 245 ~~~~~d~~~ 253 (381)
..++|++..
T Consensus 239 ~v~iw~~~~ 247 (316)
T 3bg1_A 239 RVFIWTCDD 247 (316)
T ss_dssp EEEEEECSS
T ss_pred eEEEEEccC
Confidence 999998764
No 39
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.92 E-value=4.1e-24 Score=198.80 Aligned_cols=202 Identities=8% Similarity=-0.016 Sum_probs=156.7
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
.++.++|....+|++|+.||+|++||+..........+.+|.+.|++++|+|... .+|++|+.|++|++||+.++....
T Consensus 123 ~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~-~~l~s~s~D~~v~iwd~~~~~~~~ 201 (435)
T 4e54_B 123 TSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNT-NQFYASSMEGTTRLQDFKGNILRV 201 (435)
T ss_dssp EEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCT-TEEEEECSSSCEEEEETTSCEEEE
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCC-CEEEEEeCCCEEEEeeccCCceeE
Confidence 4677787667799999999999999997655556667789999999999998432 289999999999999998775443
Q ss_pred Eecc--CCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCC-EEEEEeCCCeEEEEec
Q psy4650 117 TLEG--HGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSN-NVAIGYDEGSVLLKVG 193 (381)
Q Consensus 117 ~~~~--~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~l~~~~~dg~v~i~~~ 193 (381)
.... +...+.+++|+|++.++++|+.||.|++||+++ +.+..+.+|...|.+++|+|++. ++++|+.|+.+++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~i--- 277 (435)
T 4e54_B 202 FASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKI--- 277 (435)
T ss_dssp EECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCE---
T ss_pred EeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeE---
Confidence 3333 344678999999999999999999999999864 56677888999999999999876 7889999999999
Q ss_pred CCCceEEEecCCCEEEEEec-CceeecccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 194 REEPAVSMDVNGCKIIWARH-SEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 194 ~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
||..++....... ...+...+ ..++|+|+|.+|++++.|+.+++|++...
T Consensus 278 -------wd~~~~~~~~~~~~~~~h~~~v----~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 278 -------WDLRQVRGKASFLYSLPHRHPV----NAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp -------EETTTCCSSSCCSBCCBCSSCE----EECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred -------EecccccccceEEEeeeccccc----cceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 5554332110000 00000011 11578899999999999999999998653
No 40
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.92 E-value=1.4e-23 Score=190.05 Aligned_cols=216 Identities=15% Similarity=0.139 Sum_probs=158.7
Q ss_pred cceeeeecCCCceEEEEEec------CCeEEEecCCCcc--ceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEE
Q psy4650 35 TKVDITTNKDMIEYKISYQE------SSRVKAFNPIQVA--TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 106 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~------d~~v~i~~~~~~~--~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~v 106 (381)
...++.+.++ +.+|++++. |+++++|+..... ........+|...|.+++|+|++. +++++.||+|++
T Consensus 44 ~V~~v~fSpD-G~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~---~l~~s~dg~v~l 119 (357)
T 4g56_B 44 QIGAVRYRRD-GALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG---ILVASDSGAVEL 119 (357)
T ss_dssp EEEEEEECSS-SCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE---EEEEETTSCEEE
T ss_pred CEEEEEECCC-CCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC---EEEEECCCEEEE
Confidence 3467788888 568999998 7789999875422 122344567999999999999764 677889999999
Q ss_pred EECCCCeEE----EEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCC-EEEE
Q psy4650 107 WDYQNKTCV----QTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSN-NVAI 181 (381)
Q Consensus 107 wd~~~~~~~----~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~l~~ 181 (381)
||+.+++.. ....+|.+.|.+++|+|++.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++. .+++
T Consensus 120 Wd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s 199 (357)
T 4g56_B 120 WEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLS 199 (357)
T ss_dssp C--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEE
T ss_pred eeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeee
Confidence 999887643 23457999999999999999999999999999999999999999999999999999999875 7899
Q ss_pred EeCCCeEEEEecCC-------------Cce--EEE-----------ecCCCEEEEEecCceeecccccCCc---cccccC
Q psy4650 182 GYDEGSVLLKVGRE-------------EPA--VSM-----------DVNGCKIIWARHSEVQQANLKTMPE---VFENIT 232 (381)
Q Consensus 182 ~~~dg~v~i~~~~~-------------~~~--~~~-----------d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 232 (381)
++.||.+++|+... ..+ +.| ..+....+|+.........+.++.. .++|+|
T Consensus 200 ~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp 279 (357)
T 4g56_B 200 CGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSY 279 (357)
T ss_dssp EETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECS
T ss_pred eccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcC
Confidence 99999999986321 111 122 2233455676655444444443332 267888
Q ss_pred Cc-eEEeeehHHHHHhccCCCcC
Q psy4650 233 AG-VVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 233 dg-~~l~~~~~d~~~~~~d~~~~ 254 (381)
++ .+|++++.|+.+++||+...
T Consensus 280 ~~~~~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 280 HSSPFLASISEDCTVAVLDADFS 302 (357)
T ss_dssp SSSCCEEEEETTSCEEEECTTSC
T ss_pred CCCCEEEEEeCCCEEEEEECCCC
Confidence 87 57888999999999998653
No 41
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.92 E-value=2.3e-23 Score=200.54 Aligned_cols=189 Identities=21% Similarity=0.297 Sum_probs=158.1
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
..+.+.++ +.++++++.|+.|++|+. ....+..+.+|...|.+++|+|++. +|++++.|++|++||. +++.+.
T Consensus 389 ~~~~~s~d-g~~l~~~~~d~~v~~~~~---~~~~~~~~~~~~~~v~~~~~s~d~~--~l~~~~~d~~v~~w~~-~~~~~~ 461 (577)
T 2ymu_A 389 RGVAFSPD-GQTIASASDDKTVKLWNR---NGQLLQTLTGHSSSVWGVAFSPDDQ--TIASASDDKTVKLWNR-NGQLLQ 461 (577)
T ss_dssp EEEEECTT-SSCEEEEETTSEEEEECT---TCCEEEEEECCSSCEEEEEECTTSS--EEEEEETTSEEEEEET-TSCEEE
T ss_pred EEEEECCC-CCEEEEEeCCCEEEEEeC---CCCEEEEecCCCCCeEEEEECCCCC--EEEEEcCCCEEEEEEC-CCCEEE
Confidence 35556665 568999999999999996 3566788999999999999999876 8999999999999996 566788
Q ss_pred EeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCC
Q psy4650 117 TLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREE 196 (381)
Q Consensus 117 ~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~ 196 (381)
.+.+|...|.+++|+|++.++++++.|+.|++||. +++.+..+.+|...|++++|+|+|++|++++.||.+++
T Consensus 462 ~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~l------ 534 (577)
T 2ymu_A 462 TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKL------ 534 (577)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEE------
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEE------
Confidence 89999999999999999999999999999999995 67888999999999999999999999999999999999
Q ss_pred ceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccC
Q psy4650 197 PAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLD 250 (381)
Q Consensus 197 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d 250 (381)
||. ++.++.....+. ..+ ..++|+|||++|++++.|+.++.||
T Consensus 535 ----wd~-~~~~~~~~~~h~--~~v----~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 535 ----WNR-NGQLLQTLTGHS--SSV----WGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp ----ECT-TSCEEEEEECCS--SCE----EEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ----EeC-CCCEEEEEcCCC--CCE----EEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 554 333333322211 111 1157889999999999998888886
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.91 E-value=1.1e-24 Score=198.41 Aligned_cols=209 Identities=11% Similarity=0.047 Sum_probs=155.3
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe--
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT-- 113 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~-- 113 (381)
..++.+.++ +.++++++.|+.|++|++.......+..+.+|.+.|.+++|+|++. +|++|+.|++|++||+.++.
T Consensus 14 v~~~~~s~~-g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~--~l~s~s~d~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 14 SYEHAFNSQ-RTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSN--RIVTCSQDRNAYVYEKRPDGTW 90 (377)
T ss_dssp CSCCEECSS-SSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTC--CEEEEETTSSEEEC------CC
T ss_pred EEEEEECCC-CCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCC--EEEEEeCCCeEEEEEcCCCCce
Confidence 445666765 5589999999999999997533267788999999999999999876 79999999999999999877
Q ss_pred -EEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCe---eeEEEec-CCcceEEEEEcCCCCEEEEEeCCCeE
Q psy4650 114 -CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHR---LEISLTY-GLERVWTISSLKGSNNVAIGYDEGSV 188 (381)
Q Consensus 114 -~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~---~~~~~~~-~~~~v~~v~~~~~~~~l~~~~~dg~v 188 (381)
....+.+|...|.+++|+|++..+++++.|+.|++||+.+++ ....+.. |...|.+++|+|++.++++++.||.+
T Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i 170 (377)
T 3dwl_C 91 KQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKA 170 (377)
T ss_dssp CCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCE
T ss_pred eeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEE
Confidence 677788899999999999999999999999999999999887 4677777 89999999999999999999999999
Q ss_pred EEEecCCCceE------EEec--CCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 189 LLKVGREEPAV------SMDV--NGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 189 ~i~~~~~~~~~------~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
++|+.....+. .|.. ..+.++... .+... ...++|+|+|.++++++.++..+.|++...
T Consensus 171 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 171 YVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY---PSGGW----VHAVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp EEEEECCSSCC-CCCSCSSCSCCCEEEEEECC---CCSSS----EEEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred EEEEEEecccCCCccccccccccchhhhhhcc---cCCce----EEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 99553211000 0000 012222211 01001 112578999999999999999999998754
No 43
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.91 E-value=9.9e-24 Score=196.23 Aligned_cols=156 Identities=10% Similarity=0.040 Sum_probs=128.2
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
..++.+.|..+.++++++.||+|++||+.......+.....+...+.+++|+|++. +|++|+.||.|++||+.. +.+
T Consensus 167 V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~g~~dg~i~~wd~~~-~~~ 243 (435)
T 4e54_B 167 ITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSR--MVVTGDNVGNVILLNMDG-KEL 243 (435)
T ss_dssp CCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTT--EEEEECSSSBEEEEESSS-CBC
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCC--EEEEEeCCCcEeeeccCc-cee
Confidence 35677777667799999999999999986432222222333455688999999876 899999999999999864 557
Q ss_pred EEeccCCCCEEEEEEecCCC-EEEEEeCCCCEEEEeCCCCeeeEE---EecCCcceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy4650 116 QTLEGHGQNISAVCFHPELP-IVITGSEDGSVRVWHSGTHRLEIS---LTYGLERVWTISSLKGSNNVAIGYDEGSVLLK 191 (381)
Q Consensus 116 ~~~~~~~~~v~~~~~~p~~~-~l~s~~~d~~i~vwd~~~~~~~~~---~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~ 191 (381)
..+.+|...|.+++|+|++. ++++|+.|++|++||++++..... ..+|...|.+++|+|+|.+|++++.||.+++|
T Consensus 244 ~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iw 323 (435)
T 4e54_B 244 WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVY 323 (435)
T ss_dssp CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEE
T ss_pred EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEE
Confidence 78899999999999999887 788999999999999988765433 35688899999999999999999999999999
Q ss_pred ecC
Q psy4650 192 VGR 194 (381)
Q Consensus 192 ~~~ 194 (381)
+..
T Consensus 324 d~~ 326 (435)
T 4e54_B 324 SAS 326 (435)
T ss_dssp ESS
T ss_pred ECC
Confidence 743
No 44
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.6e-23 Score=188.91 Aligned_cols=206 Identities=18% Similarity=0.125 Sum_probs=163.3
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe--
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT-- 113 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~-- 113 (381)
...+.+.++ +.++++++.||.|++|++.......+..+.+|.+.|.+++|+|+.+..+|++|+.|+.|++||+.++.
T Consensus 14 v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 92 (379)
T 3jrp_A 14 IHDAVLDYY-GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS 92 (379)
T ss_dssp EEEEEECSS-SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEE
T ss_pred EEEEEEcCC-CCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCcee
Confidence 345666766 56899999999999999875456677889999999999999987333489999999999999999987
Q ss_pred EEEEeccCCCCEEEEEEecC--CCEEEEEeCCCCEEEEeCCCCe--eeEEEecCCcceEEEEEcC-------------CC
Q psy4650 114 CVQTLEGHGQNISAVCFHPE--LPIVITGSEDGSVRVWHSGTHR--LEISLTYGLERVWTISSLK-------------GS 176 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~--~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~v~~~~-------------~~ 176 (381)
....+.+|...|.+++|+|+ +..+++++.|+.|++||+.++. ....+..|...|.+++|+| ++
T Consensus 93 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T 3jrp_A 93 QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 172 (379)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTT
T ss_pred EeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCC
Confidence 77888889999999999999 8999999999999999999873 4456678899999999999 69
Q ss_pred CEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCC---ceEEeeehHHHHHhccCCCc
Q psy4650 177 NNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITA---GVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 177 ~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---g~~l~~~~~d~~~~~~d~~~ 253 (381)
..+++++.||.+++ ||..++...+....... ........++|+|+ +..+++++.++....|++..
T Consensus 173 ~~l~~~~~dg~i~i----------~d~~~~~~~~~~~~~~~--~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 173 RKFVTGGADNLVKI----------WKYNSDAQTYVLESTLE--GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp CEEEEEETTSCEEE----------EEEETTTTEEEEEEEEC--CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred CEEEEEeCCCeEEE----------EEecCCCcceeeEEEEe--cccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 99999999999999 55543321111110000 00000111578899 89999999999999999875
Q ss_pred C
Q psy4650 254 S 254 (381)
Q Consensus 254 ~ 254 (381)
.
T Consensus 241 ~ 241 (379)
T 3jrp_A 241 E 241 (379)
T ss_dssp T
T ss_pred C
Confidence 4
No 45
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.91 E-value=4.6e-24 Score=189.93 Aligned_cols=204 Identities=14% Similarity=0.127 Sum_probs=155.2
Q ss_pred eeeeecCC-CceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe--
Q psy4650 37 VDITTNKD-MIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT-- 113 (381)
Q Consensus 37 ~~i~~~~~-~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~-- 113 (381)
..+.+.++ .+.++++++.|++|++||+..........+.+|.+.|.+++|+|++...+|++|+.|++|++||+..+.
T Consensus 61 ~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~ 140 (316)
T 3bg1_A 61 WQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW 140 (316)
T ss_dssp EEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE
T ss_pred EEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc
Confidence 34555432 367999999999999999975433456778899999999999998444489999999999999998763
Q ss_pred -EEEEeccCCCCEEEEEEecC-----------------CCEEEEEeCCCCEEEEeCCCC---eeeEEEecCCcceEEEEE
Q psy4650 114 -CVQTLEGHGQNISAVCFHPE-----------------LPIVITGSEDGSVRVWHSGTH---RLEISLTYGLERVWTISS 172 (381)
Q Consensus 114 -~~~~~~~~~~~v~~~~~~p~-----------------~~~l~s~~~d~~i~vwd~~~~---~~~~~~~~~~~~v~~v~~ 172 (381)
....+.+|...|.+++|+|+ +.++++|+.|++|++||+..+ .....+.+|...|.+++|
T Consensus 141 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~ 220 (316)
T 3bg1_A 141 EVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAW 220 (316)
T ss_dssp EECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEEC
T ss_pred ceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEe
Confidence 23456789999999999997 468999999999999999755 456778889999999999
Q ss_pred cCCC----CEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhc
Q psy4650 173 LKGS----NNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYR 248 (381)
Q Consensus 173 ~~~~----~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~ 248 (381)
+|++ ..|++|+.||.+++|.........+. ...+ . ........++|+|+|..|++++.|+..++
T Consensus 221 sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~---~~~~-~--------~~~~~v~~v~~sp~g~~las~~~D~~v~l 288 (316)
T 3bg1_A 221 APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWS---PKLL-H--------KFNDVVWHVSWSITANILAVSGGDNKVTL 288 (316)
T ss_dssp CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCB---CCEE-E--------ECSSCEEEEEECTTTCCEEEEESSSCEEE
T ss_pred cCCCCCCCceEEEEcCCCeEEEEEccCccccchh---hhhh-h--------cCCCcEEEEEEcCCCCEEEEEcCCCeEEE
Confidence 9986 79999999999999543220000000 0011 0 00111112678999999999999999999
Q ss_pred cCCC
Q psy4650 249 LDIS 252 (381)
Q Consensus 249 ~d~~ 252 (381)
|+..
T Consensus 289 w~~~ 292 (316)
T 3bg1_A 289 WKES 292 (316)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9864
No 46
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.91 E-value=5.3e-23 Score=184.28 Aligned_cols=206 Identities=14% Similarity=0.109 Sum_probs=157.4
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccc--eeeEeeccccccEEEEEeeeC--CCccEEEEEcCCCeEEEEECCC
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVAT--LILKTLYGHEKGVNCVDYYHG--GDKPYLISGADDRLVKIWDYQN 111 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~--~~~~~l~~h~~~v~~~~~~~~--~~~~~l~s~~~d~~v~vwd~~~ 111 (381)
..++.+.++ +.++++++.||+|++|++..... .....+.+|.+.|.+++|+|. +. +|++|+.|++|++||+.+
T Consensus 14 v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~--~l~s~~~dg~v~vwd~~~ 90 (351)
T 3f3f_A 14 VHDVVYDFY-GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR--IIASASYDKTVKLWEEDP 90 (351)
T ss_dssp EEEEEECSS-SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS--EEEEEETTSCEEEEEECT
T ss_pred eeEEEEcCC-CCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC--EEEEEcCCCeEEEEecCC
Confidence 456667765 56899999999999999864322 466778899999999999994 54 899999999999999988
Q ss_pred C---------eEEEEeccCCCCEEEEEEecC--CCEEEEEeCCCCEEEEeCCCCee------------------------
Q psy4650 112 K---------TCVQTLEGHGQNISAVCFHPE--LPIVITGSEDGSVRVWHSGTHRL------------------------ 156 (381)
Q Consensus 112 ~---------~~~~~~~~~~~~v~~~~~~p~--~~~l~s~~~d~~i~vwd~~~~~~------------------------ 156 (381)
+ .....+.+|...|.+++|+|+ +.++++++.|+.|++||+.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (351)
T 3f3f_A 91 DQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSD 170 (351)
T ss_dssp TSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCC
T ss_pred CcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccce
Confidence 7 567888899999999999999 99999999999999999875431
Q ss_pred ------------------------------------eEEEecCCcceEEEEEcCCC----CEEEEEeCCCeEEEEecCCC
Q psy4650 157 ------------------------------------EISLTYGLERVWTISSLKGS----NNVAIGYDEGSVLLKVGREE 196 (381)
Q Consensus 157 ------------------------------------~~~~~~~~~~v~~v~~~~~~----~~l~~~~~dg~v~i~~~~~~ 196 (381)
...+.+|...|.+++|+|++ .++++|+.||.+++|+-...
T Consensus 171 ~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 171 FCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred eEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 33445678889999999998 78999999999999653221
Q ss_pred ce------------------------------------EEEecCCCEEEEEecCceeecccccCC---ccccccCCceEE
Q psy4650 197 PA------------------------------------VSMDVNGCKIIWARHSEVQQANLKTMP---EVFENITAGVVL 237 (381)
Q Consensus 197 ~~------------------------------------~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~dg~~l 237 (381)
.. ..|+.....++. .+.++. ..++|+|+|.++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~h~~~v~~~~~s~~~~~l 321 (351)
T 3f3f_A 251 LSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLS---------EHDDHNGEVWSVSWNLTGTIL 321 (351)
T ss_dssp C---------------------------------------CCSEEEEEEE---------EECTTSSCEEEEEECSSSCCE
T ss_pred cCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEE---------EEecccccEEEEEEcCCCCEE
Confidence 00 000000011111 111111 126789999999
Q ss_pred eeehHHHHHhccCCCc
Q psy4650 238 TLSVHVTIKYRLDISD 253 (381)
Q Consensus 238 ~~~~~d~~~~~~d~~~ 253 (381)
++++.|+..++|++..
T Consensus 322 ~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 322 SSAGDDGKVRLWKATY 337 (351)
T ss_dssp EEEETTSCEEEEEECT
T ss_pred EEecCCCcEEEEecCc
Confidence 9999999999999864
No 47
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.91 E-value=9.1e-23 Score=186.30 Aligned_cols=197 Identities=9% Similarity=-0.013 Sum_probs=158.7
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeee-CCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYH-GGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~-~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
.++.+.+++..++++|+.||.|++|++..........+.+|.+.|.+++|+| ++. +|++++.|+.|++||+.+ ...
T Consensus 77 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~--~l~s~~~d~~i~iwd~~~-~~~ 153 (383)
T 3ei3_B 77 TSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTN--QLFVSSIRGATTLRDFSG-SVI 153 (383)
T ss_dssp EEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEE--EEEEEETTTEEEEEETTS-CEE
T ss_pred EEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCC--EEEEEeCCCEEEEEECCC-Cce
Confidence 4666777765799999999999999997644444444558999999999999 444 899999999999999986 445
Q ss_pred EEecc---CCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCC-EEEEEeCCCeEEEE
Q psy4650 116 QTLEG---HGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSN-NVAIGYDEGSVLLK 191 (381)
Q Consensus 116 ~~~~~---~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~l~~~~~dg~v~i~ 191 (381)
..+.. |...|.+++|+|++..+++|+.|+.|++||+ +++.+..+..|...|.+++|+|++. ++++|+.||.+++
T Consensus 154 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i- 231 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKL- 231 (383)
T ss_dssp EEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEE-
T ss_pred EEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEE-
Confidence 55544 4478999999999999999999999999999 5778888999999999999999999 9999999999999
Q ss_pred ecCCCceEEEecCC----CEEEEEecCceeecccccCCccccccC-CceEEeeehHHHHHhccCCCcC
Q psy4650 192 VGREEPAVSMDVNG----CKIIWARHSEVQQANLKTMPEVFENIT-AGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 192 ~~~~~~~~~~d~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
||..+ +.++...... ..+ ..++|+| +|..+++++.++..+.|++...
T Consensus 232 ---------wd~~~~~~~~~~~~~~~~~---~~v----~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 232 ---------WDLRNIKDKNSYIAEMPHE---KPV----NAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp ---------EEGGGCCSTTCEEEEEECS---SCE----EEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred ---------EeCCCCCcccceEEEecCC---Cce----EEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 55544 3333322111 111 1157889 9999999999999999998654
No 48
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.91 E-value=3.1e-22 Score=180.94 Aligned_cols=218 Identities=15% Similarity=0.171 Sum_probs=168.5
Q ss_pred cceeeeecCC---CceEEEEEecCCeEEEecCCCccceeeEeecc-----ccccEEEEEeeeCCC--ccEEEEEcCCCeE
Q psy4650 35 TKVDITTNKD---MIEYKISYQESSRVKAFNPIQVATLILKTLYG-----HEKGVNCVDYYHGGD--KPYLISGADDRLV 104 (381)
Q Consensus 35 ~~~~i~~~~~---~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~-----h~~~v~~~~~~~~~~--~~~l~s~~~d~~v 104 (381)
....+.+.+. +...+++++.++.|++|+.... ..+..+.. |.+.|.+++|+|++. ..+|++|+.||.|
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i 97 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQ--GEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGII 97 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGG--GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEE
T ss_pred ceEEEEEecccCCCCceEEEECCCCEEEEEEcCCC--cEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEE
Confidence 3456666652 4556666677779999998742 23333433 668899999999844 3489999999999
Q ss_pred EEEECCCCeEEEEeccCCCCEEEEEEec-CCCEEEEEeCCCCEEEEeCCCCeeeEEE---ecCCcceEEEEEcCCCCEEE
Q psy4650 105 KIWDYQNKTCVQTLEGHGQNISAVCFHP-ELPIVITGSEDGSVRVWHSGTHRLEISL---TYGLERVWTISSLKGSNNVA 180 (381)
Q Consensus 105 ~vwd~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~~~~v~~v~~~~~~~~l~ 180 (381)
++||+.+++.+..+.+|...|.+++|+| ++..+++|+.|+.|++||+.+++....+ ..|...|.+++|+|++.+++
T Consensus 98 ~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 177 (366)
T 3k26_A 98 RIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIM 177 (366)
T ss_dssp EEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEE
T ss_pred EEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEE
Confidence 9999999999999999999999999999 8899999999999999999999998888 67999999999999999999
Q ss_pred EEeCCCeEEEEecCC-------------------------------------------------CceEEEecCCCEEEEE
Q psy4650 181 IGYDEGSVLLKVGRE-------------------------------------------------EPAVSMDVNGCKIIWA 211 (381)
Q Consensus 181 ~~~~dg~v~i~~~~~-------------------------------------------------~~~~~~d~~~~~~~~~ 211 (381)
+++.||.+++|+... ..+++-..++...+|+
T Consensus 178 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd 257 (366)
T 3k26_A 178 SCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWK 257 (366)
T ss_dssp EEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEE
T ss_pred EecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEe
Confidence 999999999997442 1222333344556676
Q ss_pred ecCcee--------------ecccccCC---ccccccCC--ceEEeeehHHHHHhccCCCcC
Q psy4650 212 RHSEVQ--------------QANLKTMP---EVFENITA--GVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 212 ~~~~~~--------------~~~~~~~~---~~~~~~~d--g~~l~~~~~d~~~~~~d~~~~ 254 (381)
...... ...+..+. ..+.|+|+ |.++++++.++..+.|++...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 258 PGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp ESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSS
T ss_pred CCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCC
Confidence 544321 11111111 12577888 999999999999999998754
No 49
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.91 E-value=2.4e-23 Score=191.47 Aligned_cols=201 Identities=17% Similarity=0.111 Sum_probs=162.4
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccc-----eeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECC
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVAT-----LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 110 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~-----~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~ 110 (381)
..++.+.+....++++++.||+|++|++..... ..+..+.+|.+.|.+++|+|++. .+|++|+.|++|++||+.
T Consensus 84 V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~~l~s~~~dg~i~iwd~~ 162 (402)
T 2aq5_A 84 VLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQ-NVLLSAGCDNVILVWDVG 162 (402)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBT-TEEEEEETTSCEEEEETT
T ss_pred EEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCC-CEEEEEcCCCEEEEEECC
Confidence 356777774577999999999999999875321 45778899999999999999874 389999999999999999
Q ss_pred CCeEEEEe--ccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEE-ecCCcc-eEEEEEcCCCCEEEEE---e
Q psy4650 111 NKTCVQTL--EGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL-TYGLER-VWTISSLKGSNNVAIG---Y 183 (381)
Q Consensus 111 ~~~~~~~~--~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~-~~~~~~-v~~v~~~~~~~~l~~~---~ 183 (381)
+++.+..+ .+|...|.+++|+|++..+++++.|+.|++||+++++.+..+ ..|... +.++.|+|++.++++| +
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~ 242 (402)
T 2aq5_A 163 TGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRM 242 (402)
T ss_dssp TTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTT
T ss_pred CCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCC
Confidence 99999999 889999999999999999999999999999999999999888 677665 8999999999999999 7
Q ss_pred CCCeEEEEecCCCceEEEecCCCEE---EEEecCceeecccccCCccccccCCceEEee-ehHHHHHhccCCCcC
Q psy4650 184 DEGSVLLKVGREEPAVSMDVNGCKI---IWARHSEVQQANLKTMPEVFENITAGVVLTL-SVHVTIKYRLDISDS 254 (381)
Q Consensus 184 ~dg~v~i~~~~~~~~~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~-~~~d~~~~~~d~~~~ 254 (381)
.|+.+++ ||..++.. ...... ......+.|+|+|..+++ +..++.++.|++...
T Consensus 243 ~d~~i~i----------wd~~~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 243 SERQVAL----------WDTKHLEEPLSLQELDT-------SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp CCEEEEE----------EETTBCSSCSEEEECCC-------CSSCEEEEEETTTTEEEEEETTCSCEEEEEECSS
T ss_pred CCceEEE----------EcCccccCCceEEeccC-------CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCC
Confidence 8999999 55543221 111110 011112567899988864 556888889988654
No 50
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=8.9e-24 Score=199.89 Aligned_cols=198 Identities=10% Similarity=0.027 Sum_probs=155.7
Q ss_pred eeeeecCC-----CceEEEEEecCCeEEEecCCCccc---------eeeEeeccccccEEEEEeeeCCCccEEEEEcCCC
Q psy4650 37 VDITTNKD-----MIEYKISYQESSRVKAFNPIQVAT---------LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDR 102 (381)
Q Consensus 37 ~~i~~~~~-----~~~~~~s~~~d~~v~i~~~~~~~~---------~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~ 102 (381)
..+.+.++ ...+|++++.||+|++|++..... .....+.+|...|.+++|+|++ .|++|+.||
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~---~lasgs~Dg 287 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT---TVVCGFKNG 287 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS---EEEEEETTS
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC---eEEEEeCCC
Confidence 45666664 256999999999999999864321 1234788999999999999753 699999999
Q ss_pred eEEEEECCCC-eEEEEeccCCCCEEEE--EEecCC-CEEEEEeCCCCEEEEeCCCCeeeEEEecCCc--ceEEEEEcCCC
Q psy4650 103 LVKIWDYQNK-TCVQTLEGHGQNISAV--CFHPEL-PIVITGSEDGSVRVWHSGTHRLEISLTYGLE--RVWTISSLKGS 176 (381)
Q Consensus 103 ~v~vwd~~~~-~~~~~~~~~~~~v~~~--~~~p~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~--~v~~v~~~~~~ 176 (381)
+|++||+.++ .+...+.+|..+|.++ +|+|++ .+|++|+.|++|+|||+++++....+.+|.. .|.+++|+|++
T Consensus 288 tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~ 367 (524)
T 2j04_B 288 FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQI 367 (524)
T ss_dssp EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTT
T ss_pred EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCc
Confidence 9999999876 4556788999999999 578887 8999999999999999999887777766543 57899999999
Q ss_pred CEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 177 NNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 177 ~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
..+++++.|+.+++ ||..++..+..+..+ ...+ ..++|+|+|..+++++.|+.+..|++..
T Consensus 368 ~~l~s~~~d~tv~l----------wd~~~~~~~~~l~gH--~~~V----~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 368 YSYIYSDGASSLRA----------VPSRAAFAVHPLVSR--ETTI----TAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp TEEEEECSSSEEEE----------EETTCTTCCEEEEEC--SSCE----EEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred CeEEEeCCCCcEEE----------EECcccccceeeecC--CCce----EEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 99999999999999 666554432222111 1111 1157899999999999999999999754
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.90 E-value=5.6e-22 Score=177.18 Aligned_cols=198 Identities=15% Similarity=0.128 Sum_probs=164.5
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
...+...++ +.++++++.|+.+++|++..........+.+|...|.+++|+|++. ++++++.|+.|++||+.+++..
T Consensus 100 v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~dg~v~~~d~~~~~~~ 176 (337)
T 1gxr_A 100 IRSCKLLPD-GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSK--VCFSCCSDGNIAVWDLHNQTLV 176 (337)
T ss_dssp EEEEEECTT-SSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEEcCC-CCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCC--EEEEEeCCCcEEEEeCCCCcee
Confidence 345666665 5689999999999999997655556778889999999999999776 8999999999999999999999
Q ss_pred EEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCC
Q psy4650 116 QTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGRE 195 (381)
Q Consensus 116 ~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~ 195 (381)
..+.+|...+.+++|+|++..+++++.|+.|++||+.+++....+. +...+.+++|+|++..+++++.+|.+++
T Consensus 177 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~----- 250 (337)
T 1gxr_A 177 RQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEV----- 250 (337)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEE-----
T ss_pred eeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEE-----
Confidence 9999999999999999999999999999999999999999888775 6688999999999999999999999999
Q ss_pred CceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 196 EPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 196 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
||..++........ ......+.|+|+|..+++++.++..+.|++...
T Consensus 251 -----~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 251 -----LHVNKPDKYQLHLH-------ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp -----EETTSSCEEEECCC-------SSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred -----EECCCCCeEEEcCC-------ccceeEEEECCCCCEEEEecCCCcEEEEECCCC
Confidence 55555443211111 011112578899999999999999999998653
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.90 E-value=8.2e-23 Score=188.75 Aligned_cols=200 Identities=15% Similarity=0.058 Sum_probs=160.9
Q ss_pred eeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEe
Q psy4650 39 ITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 118 (381)
Q Consensus 39 i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~ 118 (381)
+.+.++ +.++++++.|+.+++|+... ......+.+| ..+....|+|++. +|++|+.|+.|++||+.++.....+
T Consensus 62 ~~~s~~-g~~l~~~~~d~~v~i~d~~~--~~~~~~~~~~-~~~~~~~~~~~~~--~l~~~~~dg~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 62 NTFEKV-GSHLYKARLDGHDFLFNTII--RDGSKMLKRA-DYTAVDTAKLQMR--RFILGTTEGDIKVLDSNFNLQREID 135 (420)
T ss_dssp CEEEEE-ETTEEEEEETTEEEEEECCS--EETTTTSCSC-CEEEEEEECSSSC--EEEEEETTSCEEEECTTSCEEEEET
T ss_pred eeeeec-CCeEEEEEcCCcEEEEEecc--cceeeEEecC-CceEEEEEecCCC--EEEEEECCCCEEEEeCCCcceeeec
Confidence 444444 55789999999999999864 3333445555 4445556788776 8999999999999999999998888
Q ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCce
Q psy4650 119 EGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPA 198 (381)
Q Consensus 119 ~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~ 198 (381)
.+|.+.|.+++|+|++.++++|+.|+.|++||+.+++....+.+|...|.+++|+|++..+++++.||.+++
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~i-------- 207 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRL-------- 207 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEE--------
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEE--------
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCEEEEEecCceee-cc---c--------------ccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 199 VSMDVNGCKIIWARHSEVQQ-AN---L--------------KTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 199 ~~~d~~~~~~~~~~~~~~~~-~~---~--------------~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
||..++..+......... .. + ......++|+|+|..++++..++..+.||+...
T Consensus 208 --wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 279 (420)
T 3vl1_A 208 --WECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSK 279 (420)
T ss_dssp --EETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTC
T ss_pred --eECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCC
Confidence 666666666554321100 00 0 011112678999999999999999999998654
No 53
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.90 E-value=1.3e-22 Score=184.27 Aligned_cols=196 Identities=7% Similarity=0.036 Sum_probs=150.8
Q ss_pred eeeecCCCceE-EEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 38 DITTNKDMIEY-KISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 38 ~i~~~~~~~~~-~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
.+.+.|++..+ +++++.|++|++||+.. ...+..+ .|.+.|.+++|+|++. ++++++.+ .+.+|+..++....
T Consensus 138 ~v~fSpDg~~la~as~~~d~~i~iwd~~~--~~~~~~~-~~~~~V~~v~fspdg~--~l~s~s~~-~~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 138 LVYISREGTVAAIASSKVPAIMRIIDPSD--LTEKFEI-ETRGEVKDLHFSTDGK--VVAYITGS-SLEVISTVTGSCIA 211 (365)
T ss_dssp EEEECTTSSCEEEEESCSSCEEEEEETTT--TEEEEEE-ECSSCCCEEEECTTSS--EEEEECSS-CEEEEETTTCCEEE
T ss_pred EEEEcCCCCEEEEEECCCCCEEEEeECCC--CcEEEEe-CCCCceEEEEEccCCc--eEEeccce-eEEEEEeccCccee
Confidence 45567765433 34566799999999974 3445555 4788899999999887 78888855 55666666665443
Q ss_pred --EeccCCCCEEEEEEecCCCEEEEEeCCC----CEEEEeCCCCee----eEEEecCCcceEEEEEcCCCCEEEEEeCCC
Q psy4650 117 --TLEGHGQNISAVCFHPELPIVITGSEDG----SVRVWHSGTHRL----EISLTYGLERVWTISSLKGSNNVAIGYDEG 186 (381)
Q Consensus 117 --~~~~~~~~v~~~~~~p~~~~l~s~~~d~----~i~vwd~~~~~~----~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg 186 (381)
...+|...|.+++|+|++..+++++.|+ .+++||+..+.. ...+.+|...|++++|+|+|++||+|+.|+
T Consensus 212 ~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~ 291 (365)
T 4h5i_A 212 RKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN 291 (365)
T ss_dssp EECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS
T ss_pred eeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC
Confidence 4467888999999999999999998877 688899876653 345677889999999999999999999999
Q ss_pred eEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 187 SVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 187 ~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
.|++ ||..+++++...... +...+. .++|+|||++|++++.|+++++|++..+
T Consensus 292 ~V~i----------wd~~~~~~~~~~~~g-H~~~V~----~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 292 SIAL----------VKLKDLSMSKIFKQA-HSFAIT----EVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp CEEE----------EETTTTEEEEEETTS-SSSCEE----EEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEEE----------EECCCCcEEEEecCc-ccCCEE----EEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999 888888877654211 111111 1678999999999999999999998654
No 54
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.90 E-value=3.5e-22 Score=180.60 Aligned_cols=197 Identities=14% Similarity=0.160 Sum_probs=153.6
Q ss_pred hcceeeeecCCC--ceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCC
Q psy4650 34 ETKVDITTNKDM--IEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 111 (381)
Q Consensus 34 ~~~~~i~~~~~~--~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~ 111 (381)
.....+.+.++. +.++++++.||.|++|++..........+.+|.+.|.+++|+|++. +|++|+.|+.|++||+.+
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~~~dg~v~iwd~~~ 117 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGS--KVFTASCDKTAKMWDLSS 117 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSS--EEEEEETTSEEEEEETTT
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCC--EEEEEcCCCcEEEEEcCC
Confidence 344677778876 6899999999999999997534445578889999999999999776 899999999999999999
Q ss_pred CeEEEEeccCCCCEEEEEE--ecCCCEEEEEeCCCCEEEEeCCCCeeeEEEe----------------------------
Q psy4650 112 KTCVQTLEGHGQNISAVCF--HPELPIVITGSEDGSVRVWHSGTHRLEISLT---------------------------- 161 (381)
Q Consensus 112 ~~~~~~~~~~~~~v~~~~~--~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~---------------------------- 161 (381)
+.... +.+|...|.+++| +|++.++++++.|+.|++||+++++.+..+.
T Consensus 118 ~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 196 (368)
T 3mmy_A 118 NQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQ 196 (368)
T ss_dssp TEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEE
T ss_pred CCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEE
Confidence 98766 5569999999999 8888999999999999999998765432222
Q ss_pred --------------------------------------------------------------cCCc------------ce
Q psy4650 162 --------------------------------------------------------------YGLE------------RV 167 (381)
Q Consensus 162 --------------------------------------------------------------~~~~------------~v 167 (381)
.|.. .|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 276 (368)
T 3mmy_A 197 LENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAV 276 (368)
T ss_dssp CSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCE
T ss_pred eccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccce
Confidence 1222 47
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHh
Q psy4650 168 WTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKY 247 (381)
Q Consensus 168 ~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~ 247 (381)
.+++|+|++.++++|+.||.+++ ||..++.++.....+. .....++|+|+|..+++++.++...
T Consensus 277 ~~~~~sp~~~~l~s~~~dg~i~i----------wd~~~~~~~~~~~~~~------~~v~~~~~s~~g~~l~~~s~d~~~~ 340 (368)
T 3mmy_A 277 NGIAFHPVHGTLATVGSDGRFSF----------WDKDARTKLKTSEQLD------QPISACCFNHNGNIFAYASSYDWSK 340 (368)
T ss_dssp EEEEECTTTCCEEEEETTSCEEE----------EETTTTEEEEECCCCS------SCEEEEEECTTSSCEEEEECCCSTT
T ss_pred EEEEEecCCCEEEEEccCCeEEE----------EECCCCcEEEEecCCC------CCceEEEECCCCCeEEEEecccccc
Confidence 88888888888888888888888 7777777665543221 1111267899999999998876444
Q ss_pred cc
Q psy4650 248 RL 249 (381)
Q Consensus 248 ~~ 249 (381)
.+
T Consensus 341 ~~ 342 (368)
T 3mmy_A 341 GH 342 (368)
T ss_dssp CG
T ss_pred cc
Confidence 33
No 55
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.90 E-value=1.4e-22 Score=183.13 Aligned_cols=210 Identities=15% Similarity=0.187 Sum_probs=165.6
Q ss_pred eeeeecCCC---ceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeee-CCCccEEEEEcCCCeEEEEECCCC
Q psy4650 37 VDITTNKDM---IEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYH-GGDKPYLISGADDRLVKIWDYQNK 112 (381)
Q Consensus 37 ~~i~~~~~~---~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~-~~~~~~l~s~~~d~~v~vwd~~~~ 112 (381)
..+.+.++. +.++++++.||.|++|++.. ...+..+.+|.+.|.+++|+| ++. +|++|+.|+.|++||+.++
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~~--~l~s~~~dg~i~iwd~~~~ 148 (366)
T 3k26_A 73 YTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT--MQCIKHYVGHGNAINELKFHPRDPN--LLLSVSKDHALRLWNIQTD 148 (366)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCEEEEECTTT--CCEEEEEESCCSCEEEEEECSSCTT--EEEEEETTSCEEEEETTTT
T ss_pred EEEEeccCCCCCCCEEEEecCCCEEEEEEchh--ceEeeeecCCCCcEEEEEECCCCCC--EEEEEeCCCeEEEEEeecC
Confidence 445555442 56999999999999999874 456778889999999999999 665 8999999999999999999
Q ss_pred eEEEEe---ccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEe----------------------------
Q psy4650 113 TCVQTL---EGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLT---------------------------- 161 (381)
Q Consensus 113 ~~~~~~---~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~---------------------------- 161 (381)
+.+..+ .+|...|.+++|+|++..+++++.|+.|++||+.+++....+.
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRD 228 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECS
T ss_pred eEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccccc
Confidence 988888 7899999999999999999999999999999999876544333
Q ss_pred cCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCC---------------------------------------CceEEEe
Q psy4650 162 YGLERVWTISSLKGSNNVAIGYDEGSVLLKVGRE---------------------------------------EPAVSMD 202 (381)
Q Consensus 162 ~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~---------------------------------------~~~~~~d 202 (381)
.|...|.+++|+ +.++++++.||.+++|+... ..+++-.
T Consensus 229 ~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~ 306 (366)
T 3k26_A 229 IHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGN 306 (366)
T ss_dssp SCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEEC
T ss_pred CCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEe
Confidence 288889999998 67999999999999997322 2223333
Q ss_pred cCCCEEEEEecCceeec----ccccC-----CccccccCCceEEeeehHHHHHhccCCC
Q psy4650 203 VNGCKIIWARHSEVQQA----NLKTM-----PEVFENITAGVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 203 ~~~~~~~~~~~~~~~~~----~~~~~-----~~~~~~~~dg~~l~~~~~d~~~~~~d~~ 252 (381)
.++...+|+........ .+.++ ...++|+|+|..+++++.++..++|++.
T Consensus 307 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 307 QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 34556778776542211 23322 1126889999999999999999999864
No 56
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.90 E-value=8e-22 Score=176.17 Aligned_cols=198 Identities=14% Similarity=0.164 Sum_probs=163.9
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccc-eeeEeec--cccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCC
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVAT-LILKTLY--GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK 112 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~-~~~~~l~--~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~ 112 (381)
...+...++ +.++++++ ||.+++|++..... ..+..+. +|...|.+++|+|++. ++++++.|+.|++||+.++
T Consensus 54 v~~~~~~~~-~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~~~d~~~~ 129 (337)
T 1gxr_A 54 VCAVTISNP-TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC--TLIVGGEASTLSIWDLAAP 129 (337)
T ss_dssp CCEEEECSS-SSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS--EEEEEESSSEEEEEECCCC
T ss_pred eEEEEEecC-CcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCC--EEEEEcCCCcEEEEECCCC
Confidence 345666665 55788888 99999999864321 2233333 7999999999999776 8999999999999999988
Q ss_pred e--EEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 113 T--CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 113 ~--~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
. ....+.+|...|.+++|+|++..+++++.|+.|++||+.+++....+..|...+.+++|+|++..+++++.||.+++
T Consensus 130 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~ 209 (337)
T 1gxr_A 130 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRS 209 (337)
T ss_dssp --EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEE
Confidence 7 66778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 191 KVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 191 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
||..++..+........ ...+.++|+|..++++..++..+.|++...
T Consensus 210 ----------~d~~~~~~~~~~~~~~~-------v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~ 256 (337)
T 1gxr_A 210 ----------WDLREGRQLQQHDFTSQ-------IFSLGYCPTGEWLAVGMESSNVEVLHVNKP 256 (337)
T ss_dssp ----------EETTTTEEEEEEECSSC-------EEEEEECTTSSEEEEEETTSCEEEEETTSS
T ss_pred ----------EECCCCceEeeecCCCc-------eEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 78777776655432211 112567899999999999999999988654
No 57
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.90 E-value=1.9e-22 Score=176.35 Aligned_cols=188 Identities=8% Similarity=-0.058 Sum_probs=144.1
Q ss_pred ceEEEEEe--cCCeEEEecCCCccceeeEeeccccccEEEEEeee-CCCccEEEEEcCCCeEEEEECCCCeEEEEeccCC
Q psy4650 46 IEYKISYQ--ESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYH-GGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHG 122 (381)
Q Consensus 46 ~~~~~s~~--~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~-~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~ 122 (381)
++.+.+++ .|++|++|++.. ....+..+.+|...+..++|+| +|+..+|++|+.|++|++||+.+++++.++.+|.
T Consensus 145 g~lv~ss~~g~d~~V~~~~~s~-dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~ 223 (356)
T 2w18_A 145 RRLVSSSGTLSDQQVEVMTFAE-DGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD 223 (356)
T ss_dssp TEEEEEESSSTTCEEEEEEECT-TSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC
T ss_pred CcEEEecccCCCCcEEEEEECC-CCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC
Confidence 44444533 599999999854 3456778889999999999999 5555699999999999999999999999998754
Q ss_pred ---CCEEEEEEecCCCEE------------EEEeCCCCEEEEeCCCCeeeEEE-----ecCCcceEEEEEcCCCCEEEEE
Q psy4650 123 ---QNISAVCFHPELPIV------------ITGSEDGSVRVWHSGTHRLEISL-----TYGLERVWTISSLKGSNNVAIG 182 (381)
Q Consensus 123 ---~~v~~~~~~p~~~~l------------~s~~~d~~i~vwd~~~~~~~~~~-----~~~~~~v~~v~~~~~~~~l~~~ 182 (381)
..+.+++|+|+|.++ ++|+.|+++++||..+++.+..+ .+|...+.+..++ +..++++
T Consensus 224 ~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASg 301 (356)
T 2w18_A 224 SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAI 301 (356)
T ss_dssp ---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEE
T ss_pred cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEE
Confidence 367788999999875 67888999999999999987765 2455554444443 7789999
Q ss_pred eCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCC
Q psy4650 183 YDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDI 251 (381)
Q Consensus 183 ~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~ 251 (381)
+.||+|++ ||..+++.+..+..+... ....++|+|||.+|++++.|+++++|++
T Consensus 302 S~DgTIkI----------WDl~tGk~l~tL~gH~~~-----vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 302 LTSGTIAI----------WDLLLGQCTALLPPVSDQ-----HWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ETTSCEEE----------EETTTCSEEEEECCC--C-----CCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred cCCCcEEE----------EECCCCcEEEEecCCCCC-----eEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 99999999 888888877665432211 1111478999999999999999999975
No 58
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.90 E-value=9.2e-23 Score=187.10 Aligned_cols=148 Identities=15% Similarity=0.128 Sum_probs=122.7
Q ss_pred CCCceEEEEEecCCeEEEecCCCccc---eeeEeeccccccEEEEEeee--------CCCccEEEEEcCCCeEEEEECCC
Q psy4650 43 KDMIEYKISYQESSRVKAFNPIQVAT---LILKTLYGHEKGVNCVDYYH--------GGDKPYLISGADDRLVKIWDYQN 111 (381)
Q Consensus 43 ~~~~~~~~s~~~d~~v~i~~~~~~~~---~~~~~l~~h~~~v~~~~~~~--------~~~~~~l~s~~~d~~v~vwd~~~ 111 (381)
+....++++++.|++|++||...... ..+..+.||.+.|.+++|+| ++. +|+|||.|++|++||+.+
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~--~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ--VIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE--EEEEEETTSEEEEEEEET
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCC--EEEEEECCCeEEEEECCC
Confidence 34467899999999999999864322 23456889999999999998 443 899999999999999999
Q ss_pred CeEEEEeccCCCCEEEEEEecCCC-EEEEEeCCCCEEEEeCCCCeeeEEE-------------------------ecCCc
Q psy4650 112 KTCVQTLEGHGQNISAVCFHPELP-IVITGSEDGSVRVWHSGTHRLEISL-------------------------TYGLE 165 (381)
Q Consensus 112 ~~~~~~~~~~~~~v~~~~~~p~~~-~l~s~~~d~~i~vwd~~~~~~~~~~-------------------------~~~~~ 165 (381)
+.+...+.+|..+|.+++|+|++. ++++|+.|++|++||+.+++..... .+|..
T Consensus 176 ~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 255 (393)
T 4gq1_A 176 EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIAS 255 (393)
T ss_dssp TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSS
T ss_pred CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccc
Confidence 888888888999999999999885 8999999999999999987654322 24566
Q ss_pred ceEEEEEc-CCCCEEEEEeCCCeEEEEe
Q psy4650 166 RVWTISSL-KGSNNVAIGYDEGSVLLKV 192 (381)
Q Consensus 166 ~v~~v~~~-~~~~~l~~~~~dg~v~i~~ 192 (381)
.+.++.|. |++..+++++.|+.+++|+
T Consensus 256 ~v~~v~~~~~dg~~l~s~s~d~~i~vwd 283 (393)
T 4gq1_A 256 SLANVRWIGSDGSGILAMCKSGAWLRWN 283 (393)
T ss_dssp SCSEEEEETTTTCEEEEECTTSEEEEEE
T ss_pred cceeeeeecCCCCEEEEEeCCCCEEEEE
Confidence 78888887 7999999999999999986
No 59
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.2e-23 Score=197.26 Aligned_cols=153 Identities=15% Similarity=0.076 Sum_probs=130.7
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEE--EeeeCCCccEEEEEcCCCeEEEEECCCCeE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCV--DYYHGGDKPYLISGADDRLVKIWDYQNKTC 114 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~--~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 114 (381)
..+.+.++ ..+++|+.||+|++||+... ......+.+|.+.|.++ .|+|++. .+|+|||.|++|++||++++++
T Consensus 270 ~sv~~s~~--~~lasgs~DgtV~lWD~~~~-~~~~~~~~~H~~~V~sv~~~~s~~g~-~~laS~S~D~tvklWD~~~~~~ 345 (524)
T 2j04_B 270 TTFDFLSP--TTVVCGFKNGFVAEFDLTDP-EVPSFYDQVHDSYILSVSTAYSDFED-TVVSTVAVDGYFYIFNPKDIAT 345 (524)
T ss_dssp EEEEESSS--SEEEEEETTSEEEEEETTBC-SSCSEEEECSSSCEEEEEEECCTTSC-CEEEEEETTSEEEEECGGGHHH
T ss_pred EEEEecCC--CeEEEEeCCCEEEEEECCCC-CCceEEeecccccEEEEEEEcCCCCC-eEEEEeccCCeEEEEECCCCCc
Confidence 35555553 37999999999999999742 23456688999999999 4666552 3899999999999999998877
Q ss_pred EEEeccCCC--CEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy4650 115 VQTLEGHGQ--NISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192 (381)
Q Consensus 115 ~~~~~~~~~--~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~ 192 (381)
...+.+|.. .|.+++|+|++..+++++.|++|++||++++....++.+|...|++++|+|+|+.+++|+.||.+++|+
T Consensus 346 ~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 346 TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITN 425 (524)
T ss_dssp HCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred ccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEe
Confidence 666767653 578999999999999999999999999999998888999999999999999999999999999999986
Q ss_pred c
Q psy4650 193 G 193 (381)
Q Consensus 193 ~ 193 (381)
.
T Consensus 426 ~ 426 (524)
T 2j04_B 426 A 426 (524)
T ss_dssp S
T ss_pred c
Confidence 4
No 60
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.90 E-value=6.7e-22 Score=190.26 Aligned_cols=191 Identities=21% Similarity=0.317 Sum_probs=159.9
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
..+...++ +.++++++.|+++++|+. ....+..+.+|...|.+++|+|++. +|++++.|+.|++||. +++.+.
T Consensus 348 ~~~~~s~~-g~~l~~~~~dg~v~~~~~---~~~~~~~~~~~~~~v~~~~~s~dg~--~l~~~~~d~~v~~~~~-~~~~~~ 420 (577)
T 2ymu_A 348 WGVAFSPD-GQTIASASDDKTVKLWNR---NGQLLQTLTGHSSSVRGVAFSPDGQ--TIASASDDKTVKLWNR-NGQLLQ 420 (577)
T ss_dssp EEEEECTT-SSEEEEEETTSEEEEEET---TCCEEEEEECCSSCEEEEEECTTSS--CEEEEETTSEEEEECT-TCCEEE
T ss_pred EEEEECCC-CCEEEEEeCCCEEEEEcC---CCCEEEEecCCCCCeEEEEECCCCC--EEEEEeCCCEEEEEeC-CCCEEE
Confidence 45566666 568999999999999996 3566788999999999999999887 7999999999999995 567788
Q ss_pred EeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCC
Q psy4650 117 TLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREE 196 (381)
Q Consensus 117 ~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~ 196 (381)
.+.+|...|.+++|+|++.++++++.|+.|++||. +++.+..+.+|...|.+++|+|+++++++++.|+.+++
T Consensus 421 ~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~i------ 493 (577)
T 2ymu_A 421 TLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKL------ 493 (577)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEE------
T ss_pred EecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEE------
Confidence 89999999999999999999999999999999996 56778888999999999999999999999999999999
Q ss_pred ceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCC
Q psy4650 197 PAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 197 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~ 252 (381)
||. ++.++.....+. ..+. .++|+|||++|++++.|+.+++||..
T Consensus 494 ----w~~-~~~~~~~~~~h~--~~v~----~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 494 ----WNR-NGQLLQTLTGHS--SSVR----GVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp ----EET-TSCEEEEEECCS--SCEE----EEEECTTSSCEEEEETTSEEEEECTT
T ss_pred ----EcC-CCCEEEEEeCCC--CCEE----EEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 553 333333332211 1111 15788999999999999999999864
No 61
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.90 E-value=7.8e-22 Score=182.53 Aligned_cols=141 Identities=16% Similarity=0.231 Sum_probs=117.6
Q ss_pred eEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEE
Q psy4650 47 EYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNIS 126 (381)
Q Consensus 47 ~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~ 126 (381)
++|+. +.|++|++||........+..+.+|.+.|++++|+|++. +|++|+.||+|++||+.+++.+..+.+|...+.
T Consensus 117 n~lAv-gld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~--~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~ 193 (420)
T 4gga_A 117 NVLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN--YLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG 193 (420)
T ss_dssp SEEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CEEEE-EeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCC--EEEEEECCCeEEEEEcCCCcEEEEEeCCCCceE
Confidence 35555 458999999997644444445668889999999999887 899999999999999999999999999999999
Q ss_pred EEEEecCCCEEEEEeCCCCEEEEeCCCC-eeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy4650 127 AVCFHPELPIVITGSEDGSVRVWHSGTH-RLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192 (381)
Q Consensus 127 ~~~~~p~~~~l~s~~~d~~i~vwd~~~~-~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~ 192 (381)
+++|+ +..+++|+.|+.+++||.... ..+..+.+|...+..+.++|++.++++++.||.+++|.
T Consensus 194 ~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~ 258 (420)
T 4gga_A 194 SLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 258 (420)
T ss_dssp EEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEe
Confidence 98875 579999999999999998864 34566777888888888888888888888888887764
No 62
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.89 E-value=7.3e-22 Score=197.67 Aligned_cols=213 Identities=17% Similarity=0.198 Sum_probs=173.3
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
...+.++++ +.++++++.+|.|++|+... ...+..+.+|.++|.+++|+|++. +|++|+.||.|++||+.+++.+
T Consensus 16 v~~i~~sp~-~~~la~~~~~g~v~iwd~~~--~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 16 VKGIDFHPT-EPWVLTTLYSGRVEIWNYET--QVEVRSIQVTETPVRAGKFIARKN--WIIVGSDDFRIRVFNYNTGEKV 90 (814)
T ss_dssp EEEEEECSS-SSEEEEEETTSEEEEEETTT--TEEEEEEECCSSCEEEEEEEGGGT--EEEEEETTSEEEEEETTTCCEE
T ss_pred eEEEEECCC-CCEEEEEeCCCEEEEEECCC--CceEEEEecCCCcEEEEEEeCCCC--EEEEEeCCCeEEEEECCCCcEE
Confidence 346667776 56899999999999999864 556788889999999999999876 8999999999999999999999
Q ss_pred EEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCC-eeeEEEecCCcceEEEEEcC-CCCEEEEEeCCCeEEEEec
Q psy4650 116 QTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTH-RLEISLTYGLERVWTISSLK-GSNNVAIGYDEGSVLLKVG 193 (381)
Q Consensus 116 ~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~-~~~~~~~~~~~~v~~v~~~~-~~~~l~~~~~dg~v~i~~~ 193 (381)
..+.+|.+.|.+++|+|+++.+++++.|+.|++||+.++ .....+.+|...|.+++|+| ++..+++++.||.+++|+.
T Consensus 91 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~ 170 (814)
T 3mkq_A 91 VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (814)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEET
T ss_pred EEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 999999999999999999999999999999999999987 67778888999999999999 8899999999999999973
Q ss_pred CC--------------CceEEEec------------CCCEEEEEecCceeecccccCCc---cccccCCceEEeeehHHH
Q psy4650 194 RE--------------EPAVSMDV------------NGCKIIWARHSEVQQANLKTMPE---VFENITAGVVLTLSVHVT 244 (381)
Q Consensus 194 ~~--------------~~~~~~d~------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~dg~~l~~~~~d~ 244 (381)
.. .....|.+ ++...+|+.........+.++.. .+.|+|+|..+++++.++
T Consensus 171 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 250 (814)
T 3mkq_A 171 GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG 250 (814)
T ss_dssp TCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 21 11122222 22334565544433333333321 267899999999999999
Q ss_pred HHhccCCCc
Q psy4650 245 IKYRLDISD 253 (381)
Q Consensus 245 ~~~~~d~~~ 253 (381)
....|++..
T Consensus 251 ~v~vwd~~~ 259 (814)
T 3mkq_A 251 TLKIWNSST 259 (814)
T ss_dssp CEEEEETTT
T ss_pred eEEEEECCC
Confidence 999998764
No 63
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.89 E-value=2.3e-22 Score=182.40 Aligned_cols=211 Identities=12% Similarity=0.051 Sum_probs=160.6
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 114 (381)
....+...++ +.++++++.++.|++|++.......+..+.+|.+.|.+++|+|++. +|++++.|+.|++||+.++..
T Consensus 10 ~i~~~~~s~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~~~~~dg~i~vwd~~~~~~ 86 (372)
T 1k8k_C 10 PISCHAWNKD-RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN--RIVTCGTDRNAYVWTLKGRTW 86 (372)
T ss_dssp CCCEEEECTT-SSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTT--EEEEEETTSCEEEEEEETTEE
T ss_pred CeEEEEECCC-CCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCC--EEEEEcCCCeEEEEECCCCee
Confidence 3456667766 5689999999999999986533337788999999999999999776 899999999999999988875
Q ss_pred EE--EeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCee---eEEE-ecCCcceEEEEEcCCCCEEEEEeCCCeE
Q psy4650 115 VQ--TLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRL---EISL-TYGLERVWTISSLKGSNNVAIGYDEGSV 188 (381)
Q Consensus 115 ~~--~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~---~~~~-~~~~~~v~~v~~~~~~~~l~~~~~dg~v 188 (381)
.. .+..|...|.+++|+|++.++++++.|+.|++||+..+.. ...+ ..|...+.+++|+|++.++++++.||.+
T Consensus 87 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 166 (372)
T 1k8k_C 87 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKC 166 (372)
T ss_dssp EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCE
Confidence 44 3467899999999999999999999999999999988763 2333 4578899999999999999999999999
Q ss_pred EEEecCCCce------EEEe--cCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 189 LLKVGREEPA------VSMD--VNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 189 ~i~~~~~~~~------~~~d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
++|+...... ..|. ...+..+.....+. .....+.|+|++..+++++.++..+.|++...
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 167 RIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC------GWVHGVCFSANGSRVAWVSHDSTVCLADADKK 234 (372)
T ss_dssp EEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS------SCEEEEEECSSSSEEEEEETTTEEEEEEGGGT
T ss_pred EEEEcccccccccccccccccccchhhheEecCCCC------CeEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 9954211000 0000 12333333332110 01112577899999999999999999998643
No 64
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.7e-22 Score=183.58 Aligned_cols=203 Identities=14% Similarity=0.108 Sum_probs=158.9
Q ss_pred eeeeecCC-CceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe--
Q psy4650 37 VDITTNKD-MIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT-- 113 (381)
Q Consensus 37 ~~i~~~~~-~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~-- 113 (381)
..+.+.++ ...++++++.||.|++||+.......+..+.+|...|.+++|+|+....++++++.|+.|++||+.++.
T Consensus 59 ~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 138 (379)
T 3jrp_A 59 WRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT 138 (379)
T ss_dssp EEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC
T ss_pred EEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce
Confidence 45555443 267999999999999999976444467788899999999999998212389999999999999998873
Q ss_pred EEEEeccCCCCEEEEEEec-------------CCCEEEEEeCCCCEEEEeCCCCe----eeEEEecCCcceEEEEEcCC-
Q psy4650 114 CVQTLEGHGQNISAVCFHP-------------ELPIVITGSEDGSVRVWHSGTHR----LEISLTYGLERVWTISSLKG- 175 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p-------------~~~~l~s~~~d~~i~vwd~~~~~----~~~~~~~~~~~v~~v~~~~~- 175 (381)
....+.+|...|.+++|+| ++..+++++.|+.|++||++++. ....+.+|...|.+++|+|+
T Consensus 139 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~ 218 (379)
T 3jrp_A 139 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 218 (379)
T ss_dssp CEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred eeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCC
Confidence 4556778999999999999 68999999999999999998764 45667789999999999999
Q ss_pred --CCEEEEEeCCCeEEEEecCCCceEEEecCCCEE---EEEecCceeecccccCCccccccCCceEEeeehHHHHHhccC
Q psy4650 176 --SNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKI---IWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLD 250 (381)
Q Consensus 176 --~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d 250 (381)
+.++++++.||.+++ ||..++.. ........ .......++|+|+|..+++++.++..+.|+
T Consensus 219 ~~~~~l~s~~~dg~i~i----------wd~~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 219 LLRSYLASVSQDRTCII----------WTQDNEQGPWKKTLLKEEK----FPDVLWRASWSLSGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp SSSEEEEEEETTSCEEE----------EEESSTTSCCEEEESSSSC----CSSCEEEEEECSSSCCEEEEESSSSEEEEE
T ss_pred CCCCeEEEEeCCCEEEE----------EeCCCCCccceeeeecccc----CCCcEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 899999999999999 55544310 00011000 111111257899999999999999999999
Q ss_pred CCc
Q psy4650 251 ISD 253 (381)
Q Consensus 251 ~~~ 253 (381)
+..
T Consensus 285 ~~~ 287 (379)
T 3jrp_A 285 ENL 287 (379)
T ss_dssp EEE
T ss_pred CCC
Confidence 863
No 65
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.6e-21 Score=176.29 Aligned_cols=212 Identities=13% Similarity=0.126 Sum_probs=160.0
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
...+.+.++ +.++++++.||.|++|++.. ...+..+.+|.+.|.+++|+|++. +|++++.|+.|++||+.+++.+
T Consensus 35 v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~ 109 (369)
T 3zwl_B 35 LTQVKYNKE-GDLLFSCSKDSSASVWYSLN--GERLGTLDGHTGTIWSIDVDCFTK--YCVTGSADYSIKLWDVSNGQCV 109 (369)
T ss_dssp EEEEEECTT-SCEEEEEESSSCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSS--EEEEEETTTEEEEEETTTCCEE
T ss_pred EEEEEEcCC-CCEEEEEeCCCEEEEEeCCC--chhhhhhhhcCCcEEEEEEcCCCC--EEEEEeCCCeEEEEECCCCcEE
Confidence 345666765 56999999999999999864 456788999999999999999776 8999999999999999887655
Q ss_pred EEeccCCC------------------------------------------------------------CEEEEEEecCCC
Q psy4650 116 QTLEGHGQ------------------------------------------------------------NISAVCFHPELP 135 (381)
Q Consensus 116 ~~~~~~~~------------------------------------------------------------~v~~~~~~p~~~ 135 (381)
..+. |.. .+.+++|+|++.
T Consensus 110 ~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (369)
T 3zwl_B 110 ATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK 188 (369)
T ss_dssp EEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC
T ss_pred EEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC
Confidence 4433 222 677777788888
Q ss_pred EEEEEeCCCCEEEEeCCC-CeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCce-EE-----------Ee
Q psy4650 136 IVITGSEDGSVRVWHSGT-HRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPA-VS-----------MD 202 (381)
Q Consensus 136 ~l~s~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~-~~-----------~d 202 (381)
.+++++.|+.|++||+.+ +.....+..|...|.+++|+|++.++++++.||.+++|+...... .. |.
T Consensus 189 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 268 (369)
T 3zwl_B 189 YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVIT 268 (369)
T ss_dssp EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC
T ss_pred EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEec
Confidence 888888999999999998 788888888999999999999999999999999999987543211 11 11
Q ss_pred cCC------------------------CEEEEEecCceeecccccCCc---cccccCCceEEeeehHHHHHhccCCCc
Q psy4650 203 VNG------------------------CKIIWARHSEVQQANLKTMPE---VFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 203 ~~~------------------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
+.+ ...+|+.........+.++.. .++|+|+|.++++++.++..++|++..
T Consensus 269 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 269 PLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp SSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred CCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 111 122333322222222222221 167889999999999999999998864
No 66
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.2e-22 Score=187.17 Aligned_cols=216 Identities=11% Similarity=0.104 Sum_probs=164.3
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccc------cccEEEEEeeeCCCccEEEEEcCCC---eEEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGH------EKGVNCVDYYHGGDKPYLISGADDR---LVKI 106 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h------~~~v~~~~~~~~~~~~~l~s~~~d~---~v~v 106 (381)
...+.+.+++..++++++.|+.|++||+.. ...+..+..| ...|.+++|+|++. .++++++.|+ .|++
T Consensus 168 v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~~~~i~~ 244 (416)
T 2pm9_A 168 VISLAWNQSLAHVFASAGSSNFASIWDLKA--KKEVIHLSYTSPNSGIKQQLSVVEWHPKNS-TRVATATGSDNDPSILI 244 (416)
T ss_dssp CCEEEECSSCTTEEEEESSSSCEEEEETTT--TEEEEEECCCCCSSCCCCCEEEEEECSSCT-TEEEEEECCSSSCCCCE
T ss_pred eeEEEeCCCCCcEEEEEcCCCCEEEEECCC--CCcceEEeccccccccCCceEEEEECCCCC-CEEEEEECCCCCceEEE
Confidence 456777777678999999999999999974 4455666665 78999999999864 3899999999 9999
Q ss_pred EECCCC-eEEEEec-cCCCCEEEEEEec-CCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCC-CEEEEE
Q psy4650 107 WDYQNK-TCVQTLE-GHGQNISAVCFHP-ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGS-NNVAIG 182 (381)
Q Consensus 107 wd~~~~-~~~~~~~-~~~~~v~~~~~~p-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~l~~~ 182 (381)
||+.++ .+...+. +|...|.+++|+| ++.++++++.|+.|++||+.+++.+..+..|...|.+++|+|++ .+++++
T Consensus 245 ~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~ 324 (416)
T 2pm9_A 245 WDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACA 324 (416)
T ss_dssp EETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEEC
T ss_pred EeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEE
Confidence 999986 5677787 8999999999999 89999999999999999999999999999999999999999998 899999
Q ss_pred eCCCeEEEEecCCCceEE-E------ecCCCEEEEEecC---ce---------eecccccCCccccccCCceEEeeehHH
Q psy4650 183 YDEGSVLLKVGREEPAVS-M------DVNGCKIIWARHS---EV---------QQANLKTMPEVFENITAGVVLTLSVHV 243 (381)
Q Consensus 183 ~~dg~v~i~~~~~~~~~~-~------d~~~~~~~~~~~~---~~---------~~~~~~~~~~~~~~~~dg~~l~~~~~d 243 (381)
+.||.+++|+-....... . .......+|.... +. ............+|+|||+++++++.+
T Consensus 325 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d 404 (416)
T 2pm9_A 325 SFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDG 404 (416)
T ss_dssp CSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTS
T ss_pred ecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCC
Confidence 999999997643321100 0 0000011111100 00 000011111125789999999999999
Q ss_pred HHHhccCCCcC
Q psy4650 244 TIKYRLDISDS 254 (381)
Q Consensus 244 ~~~~~~d~~~~ 254 (381)
+.+.+|++...
T Consensus 405 ~~v~~w~~~~~ 415 (416)
T 2pm9_A 405 KGVSITNPKIS 415 (416)
T ss_dssp SCBCCBCCCCC
T ss_pred CeEEEEEeccC
Confidence 99999998653
No 67
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.5e-22 Score=182.15 Aligned_cols=190 Identities=10% Similarity=0.086 Sum_probs=141.8
Q ss_pred EEEEecCCeEEEecCCCc-------cceeeEee-ccccccEEEEEeee--CCCccEEEEEcCCCeEEEEECCCCeEEEEe
Q psy4650 49 KISYQESSRVKAFNPIQV-------ATLILKTL-YGHEKGVNCVDYYH--GGDKPYLISGADDRLVKIWDYQNKTCVQTL 118 (381)
Q Consensus 49 ~~s~~~d~~v~i~~~~~~-------~~~~~~~l-~~h~~~v~~~~~~~--~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~ 118 (381)
+++++.|+++++|+.... ....+..+ .+|.+.|.+++|+| ++. ++++|+.|++|++||+.+++.....
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~l~s~s~dg~i~~wd~~~~~~~~~~ 165 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTE--YFIWADNRGTIGFQSYEDDSQYIVH 165 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CC--EEEEEETTCCEEEEESSSSCEEEEE
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCC--EEEEEeCCCcEEEEECCCCcEEEEE
Confidence 677777777777765421 11112333 36778999999999 776 8999999999999999999887766
Q ss_pred cc-CCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeee-EEEec-CCcceEEEEEcCCCCEEEEEeCCCeEEEEecCC
Q psy4650 119 EG-HGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLE-ISLTY-GLERVWTISSLKGSNNVAIGYDEGSVLLKVGRE 195 (381)
Q Consensus 119 ~~-~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~-~~~~~-~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~ 195 (381)
.. |...+.+++|+|++.++++|+.|+.|++||+++++.. ..+.. |...|.+++|+|+|.+|++++ ++.+++
T Consensus 166 ~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~i----- 239 (343)
T 3lrv_A 166 SAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVC----- 239 (343)
T ss_dssp CCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEE-----
T ss_pred ecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEE-----
Confidence 44 4558999999999999999999999999999999887 78888 999999999999999999999 559999
Q ss_pred CceEEEecCCCEEEEEecCce-eecccccCCccccccCCceEEeeehH-HHHHhccCCCc
Q psy4650 196 EPAVSMDVNGCKIIWARHSEV-QQANLKTMPEVFENITAGVVLTLSVH-VTIKYRLDISD 253 (381)
Q Consensus 196 ~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dg~~l~~~~~-d~~~~~~d~~~ 253 (381)
||.+++..+..+.... +...+.. ..++|+|+|.++++++. ++....|++..
T Consensus 240 -----wd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 240 -----FDLRKDVGTLAYPTYTIPEFKTGT--VTYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp -----EETTSSTTCBSSCCCBC-----CC--EEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred -----EEcCCCCcceeecccccccccccc--eEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 5655443222111100 0001111 12678999999999777 77788887754
No 68
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.89 E-value=5.4e-23 Score=187.25 Aligned_cols=197 Identities=10% Similarity=0.058 Sum_probs=146.3
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCcc-ceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe-
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVA-TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT- 113 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~-~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~- 113 (381)
...+.+.++ +.++++++.|++|++|++.... ......+.+|.+.|.+++|+|++. +|++|+.|+.|++||+.++.
T Consensus 58 v~~~~~s~~-~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 58 VTCVDWAPK-SNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNED--KFAVGSGARVISVCYFEQEND 134 (377)
T ss_dssp EEEEEECTT-TCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSS--CCEEEESSSCEEECCC-----
T ss_pred EEEEEEeCC-CCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCC--EEEEEecCCeEEEEEECCccc
Confidence 355667766 5689999999999999997533 235667889999999999999776 79999999999999999886
Q ss_pred --EEEEecc-CCCCEEEEEEecCCCEEEEEeCCCCEEEEeCC------------------CCeeeEEEecCCcceEEEEE
Q psy4650 114 --CVQTLEG-HGQNISAVCFHPELPIVITGSEDGSVRVWHSG------------------THRLEISLTYGLERVWTISS 172 (381)
Q Consensus 114 --~~~~~~~-~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~------------------~~~~~~~~~~~~~~v~~v~~ 172 (381)
....+.+ |...|.+++|+|++.++++++.|+.|++||+. .++.+..+ .|...|.+++|
T Consensus 135 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 213 (377)
T 3dwl_C 135 WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGF 213 (377)
T ss_dssp CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEE
T ss_pred ceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEE
Confidence 3677777 99999999999999999999999999999985 35566666 88899999999
Q ss_pred cCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCC---ccccccCCceEEeeehHHHHHhcc
Q psy4650 173 LKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMP---EVFENITAGVVLTLSVHVTIKYRL 249 (381)
Q Consensus 173 ~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~dg~~l~~~~~d~~~~~~ 249 (381)
+|+++++++++.||.+++ ||..++...... ...+.++. ..+.|+|+|.++++++.+... .|
T Consensus 214 sp~~~~l~~~~~d~~i~i----------wd~~~~~~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~ 277 (377)
T 3dwl_C 214 SPSGNALAYAGHDSSVTI----------AYPSAPEQPPRA-----LITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LL 277 (377)
T ss_dssp CTTSSCEEEEETTTEEC-----------CEECSTTSCEEE-----CCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EE
T ss_pred CCCCCEEEEEeCCCcEEE----------EECCCCCCccee-----eEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EE
Confidence 999999999999999999 555444321000 00111111 125788999999998766544 55
Q ss_pred CCC
Q psy4650 250 DIS 252 (381)
Q Consensus 250 d~~ 252 (381)
+..
T Consensus 278 ~~~ 280 (377)
T 3dwl_C 278 QGN 280 (377)
T ss_dssp CCC
T ss_pred EeC
Confidence 554
No 69
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.89 E-value=3.6e-21 Score=176.99 Aligned_cols=213 Identities=15% Similarity=0.194 Sum_probs=164.1
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECC-CCeE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ-NKTC 114 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~-~~~~ 114 (381)
...+...++ +.++++++.||.|++|++.. ...+..+.+|...|.++.|++ . ++++|+.|+.|++||+. .+..
T Consensus 137 v~~v~~s~~-~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~~~~~v~~~~~~~--~--~l~~~~~dg~i~i~d~~~~~~~ 209 (401)
T 4aez_A 137 VASVKWSHD-GSFLSVGLGNGLVDIYDVES--QTKLRTMAGHQARVGCLSWNR--H--VLSSGSRSGAIHHHDVRIANHQ 209 (401)
T ss_dssp EEEEEECTT-SSEEEEEETTSCEEEEETTT--CCEEEEECCCSSCEEEEEEET--T--EEEEEETTSEEEEEETTSSSCE
T ss_pred EEEEEECCC-CCEEEEECCCCeEEEEECcC--CeEEEEecCCCCceEEEEECC--C--EEEEEcCCCCEEEEecccCcce
Confidence 456667765 56899999999999999874 456788899999999999943 4 89999999999999998 4567
Q ss_pred EEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCC-CEEEEEe--CCCeEEEE
Q psy4650 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGS-NNVAIGY--DEGSVLLK 191 (381)
Q Consensus 115 ~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~l~~~~--~dg~v~i~ 191 (381)
...+.+|.+.|.+++|+|++..+++|+.|+.|++||+.++.....+..|...|.+++|+|++ .++++++ .||.+++|
T Consensus 210 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 210 IGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred eeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 88899999999999999999999999999999999999999999999999999999999976 4666655 79999998
Q ss_pred ecCCC----------------------ceEEEe--cCCCEEEEEecCcee--ecccccCC---ccccccCCceEEeeehH
Q psy4650 192 VGREE----------------------PAVSMD--VNGCKIIWARHSEVQ--QANLKTMP---EVFENITAGVVLTLSVH 242 (381)
Q Consensus 192 ~~~~~----------------------~~~~~d--~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~dg~~l~~~~~ 242 (381)
+.... .++... .++...+|....... ...+.++. ..+.|+|+|..+++++.
T Consensus 290 d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~ 369 (401)
T 4aez_A 290 NAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAAS 369 (401)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECT
T ss_pred ECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeC
Confidence 73321 111111 233345555544211 11122222 12578889999999988
Q ss_pred HHHHhccCCCcCh
Q psy4650 243 VTIKYRLDISDSH 255 (381)
Q Consensus 243 d~~~~~~d~~~~~ 255 (381)
++....|++....
T Consensus 370 dg~i~iw~~~~~~ 382 (401)
T 4aez_A 370 DENLKFWRVYDGD 382 (401)
T ss_dssp TSEEEEEECCC--
T ss_pred CCcEEEEECCCCc
Confidence 8888888886543
No 70
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.89 E-value=2.3e-21 Score=202.76 Aligned_cols=152 Identities=18% Similarity=0.245 Sum_probs=139.5
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
+.+.++++ +.++++|+.||+|++|+... ...+..+.+|.+.|.+++|+|++. ++++|+.|++|++||+.+++.+.
T Consensus 619 ~~~~~s~~-~~~l~s~~~d~~i~vw~~~~--~~~~~~~~~h~~~v~~~~~s~~~~--~l~s~~~d~~v~vwd~~~~~~~~ 693 (1249)
T 3sfz_A 619 YHACFSQD-GQRIASCGADKTLQVFKAET--GEKLLDIKAHEDEVLCCAFSSDDS--YIATCSADKKVKIWDSATGKLVH 693 (1249)
T ss_dssp EEEEECTT-SSEEEEEETTSCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEECCC-CCEEEEEeCCCeEEEEECCC--CCEEEEeccCCCCEEEEEEecCCC--EEEEEeCCCeEEEEECCCCceEE
Confidence 45666766 56899999999999999974 456788999999999999999876 89999999999999999999999
Q ss_pred EeccCCCCEEEEEEecC--CCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEec
Q psy4650 117 TLEGHGQNISAVCFHPE--LPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVG 193 (381)
Q Consensus 117 ~~~~~~~~v~~~~~~p~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~ 193 (381)
.+.+|...|.+++|+|+ +..+++|+.|+.|++||+.++.....+.+|...|.+++|+|++..+++++.||.+++|+.
T Consensus 694 ~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~ 772 (1249)
T 3sfz_A 694 TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDV 772 (1249)
T ss_dssp EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEG
T ss_pred EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeC
Confidence 99999999999999994 458999999999999999999999999999999999999999999999999999999973
No 71
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.89 E-value=6.5e-22 Score=181.24 Aligned_cols=204 Identities=13% Similarity=0.098 Sum_probs=163.2
Q ss_pred ceeeeec----CCCceE-EEEEecCCeEEEecCCCcc----ceeeE-----ee-------ccccccEEEEEeeeCCCccE
Q psy4650 36 KVDITTN----KDMIEY-KISYQESSRVKAFNPIQVA----TLILK-----TL-------YGHEKGVNCVDYYHGGDKPY 94 (381)
Q Consensus 36 ~~~i~~~----~~~~~~-~~s~~~d~~v~i~~~~~~~----~~~~~-----~l-------~~h~~~v~~~~~~~~~~~~~ 94 (381)
...+... ++ +.+ +++++.||.|++||+.... ...+. .+ ..|...|.+++|+|++ +
T Consensus 124 v~~~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~ 199 (397)
T 1sq9_A 124 FWALKWGASNDRL-LSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG---L 199 (397)
T ss_dssp EEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS---E
T ss_pred EEEEEEeeccCCC-CceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc---e
Confidence 4456666 55 456 9999999999999986400 22233 55 4489999999999966 7
Q ss_pred EEEEcCCCeEEEEECCCCeEEEEecc---C---CCCEEEEEEecCCCEEEEEeCC---CCEEEEeCCCCeeeEEEec---
Q psy4650 95 LISGADDRLVKIWDYQNKTCVQTLEG---H---GQNISAVCFHPELPIVITGSED---GSVRVWHSGTHRLEISLTY--- 162 (381)
Q Consensus 95 l~s~~~d~~v~vwd~~~~~~~~~~~~---~---~~~v~~~~~~p~~~~l~s~~~d---~~i~vwd~~~~~~~~~~~~--- 162 (381)
+++++.|+.|++||+.+++.+..+.. | ...|.+++|+|++.++++++.| +.|++||+.+++.+..+..
T Consensus 200 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~ 279 (397)
T 1sq9_A 200 IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTH 279 (397)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--
T ss_pred EEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcc
Confidence 99999999999999999999999998 9 9999999999999999999999 9999999999999999988
Q ss_pred ----------CCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeeccc-----------
Q psy4650 163 ----------GLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANL----------- 221 (381)
Q Consensus 163 ----------~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~----------- 221 (381)
|...|.+++|+|++.+|++++.||.+++ ||..++.++............
T Consensus 280 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i----------wd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 349 (397)
T 1sq9_A 280 SSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRF----------WDVKTKERITTLNMHCDDIEIEEDILAVDEHG 349 (397)
T ss_dssp ------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEE----------EETTTTEEEEEEECCGGGCSSGGGCCCBCTTS
T ss_pred cccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEE----------EEcCCCceeEEEecccCcccchhhhhcccccc
Confidence 8999999999999999999999999999 788777777665511000000
Q ss_pred ----ccCCccccccCCc----------eEEeeehHHHHHhccCCCc
Q psy4650 222 ----KTMPEVFENITAG----------VVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 222 ----~~~~~~~~~~~dg----------~~l~~~~~d~~~~~~d~~~ 253 (381)
......++|+|+| ..+++++.++....|++..
T Consensus 350 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 350 DSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp CBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred ccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 1111126788998 7999999999999998754
No 72
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.88 E-value=4.2e-22 Score=185.43 Aligned_cols=207 Identities=13% Similarity=0.164 Sum_probs=154.3
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCcc---------ceeeEeecccc------------ccEEEEEeeeCCCc
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVA---------TLILKTLYGHE------------KGVNCVDYYHGGDK 92 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~---------~~~~~~l~~h~------------~~v~~~~~~~~~~~ 92 (381)
.....+.++++ +.++++|+.||.|++|+..... ..+...+.+|. +.|.+++|+|+++.
T Consensus 29 ~~V~~v~~s~~-g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 29 DIISTVEFNHS-GELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GSEEEEEECSS-SSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred CcEEEEEECCC-CCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 44556777776 6699999999999999986422 12467888998 88999999998743
Q ss_pred cEEEEEcCCCeEEEEECCCCeEE---------------------------------------EE-eccCCCCEEEEEEec
Q psy4650 93 PYLISGADDRLVKIWDYQNKTCV---------------------------------------QT-LEGHGQNISAVCFHP 132 (381)
Q Consensus 93 ~~l~s~~~d~~v~vwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~~p 132 (381)
..+++++.|++|++||+.++... .. ..+|...|.+++|+|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 48999999999999998764331 12 367999999999999
Q ss_pred CCCEEEEEeCCCCEEEEeCCC-CeeeEE-------EecCCcceEEEEEcCCC-CEEEEEeCCCeEEEEecCCCceEEEec
Q psy4650 133 ELPIVITGSEDGSVRVWHSGT-HRLEIS-------LTYGLERVWTISSLKGS-NNVAIGYDEGSVLLKVGREEPAVSMDV 203 (381)
Q Consensus 133 ~~~~l~s~~~d~~i~vwd~~~-~~~~~~-------~~~~~~~v~~v~~~~~~-~~l~~~~~dg~v~i~~~~~~~~~~~d~ 203 (381)
++..+++| .|+.|++||+.+ +..... +.+|...|.+++|+|++ .++++|+.||.+++| |.
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iw----------d~ 256 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLC----------DM 256 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEE----------ET
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEE----------EC
Confidence 99999998 799999999994 444432 45788899999999998 999999999999995 44
Q ss_pred CCCEE----EEEecCceee---cccc---cCCccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 204 NGCKI----IWARHSEVQQ---ANLK---TMPEVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 204 ~~~~~----~~~~~~~~~~---~~~~---~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
.++.. +.....+... ..+. +....++|+|+|.++++++. +..++||+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 43332 1111111000 0000 01112678899999999988 8899999875
No 73
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.88 E-value=1.4e-21 Score=177.30 Aligned_cols=197 Identities=13% Similarity=0.150 Sum_probs=158.7
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe---
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT--- 113 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~--- 113 (381)
..+.+.++ +.++++++.||.|++|++..........+.+|...|.+++|+|++. ++++|+.|+.|++||+..+.
T Consensus 56 ~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~v~i~d~~~~~~~~ 132 (372)
T 1k8k_C 56 TGVDWAPD-SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEK--KFAVGSGSRVISICYFEQENDWW 132 (372)
T ss_dssp EEEEEETT-TTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSS--EEEEEETTSSEEEEEEETTTTEE
T ss_pred cEEEEeCC-CCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCC--EEEEEeCCCEEEEEEecCCCcce
Confidence 45666665 5689999999999999986543334455678999999999999876 89999999999999998875
Q ss_pred -EEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeC------------------CCCeeeEEEecCCcceEEEEEcC
Q psy4650 114 -CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS------------------GTHRLEISLTYGLERVWTISSLK 174 (381)
Q Consensus 114 -~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~------------------~~~~~~~~~~~~~~~v~~v~~~~ 174 (381)
......+|...|.+++|+|++.++++++.|+.|++||+ ..+..+..+..|...+.+++|+|
T Consensus 133 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 212 (372)
T 1k8k_C 133 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA 212 (372)
T ss_dssp EEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS
T ss_pred eeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC
Confidence 23334678999999999999999999999999999995 46788888888999999999999
Q ss_pred CCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 175 GSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 175 ~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
++.++++++.||.+++ ||..++.++.....+.. .+ ..++|+|+|.+++++ .++..+.|++..
T Consensus 213 ~~~~l~~~~~d~~i~i----------~d~~~~~~~~~~~~~~~--~v----~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 213 NGSRVAWVSHDSTVCL----------ADADKKMAVATLASETL--PL----LAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp SSSEEEEEETTTEEEE----------EEGGGTTEEEEEECSSC--CE----EEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CCCEEEEEeCCCEEEE----------EECCCCceeEEEccCCC--Ce----EEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 9999999999999999 66665555544432211 11 115678999999888 778888888765
No 74
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.88 E-value=5.3e-22 Score=196.87 Aligned_cols=202 Identities=18% Similarity=0.115 Sum_probs=163.4
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe--
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT-- 113 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~-- 113 (381)
..++.++++ +.++++|+.||+|++|++.......+..+.+|.+.|.+++|+|+.+..++++|+.||+|++||+.++.
T Consensus 12 V~~l~~s~d-g~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~ 90 (753)
T 3jro_A 12 IHDAVLDYY-GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS 90 (753)
T ss_dssp EEEECCCSS-SCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEE
T ss_pred eEEEEECCC-CCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccc
Confidence 345666666 55899999999999999875456677889999999999999987333489999999999999999986
Q ss_pred EEEEeccCCCCEEEEEEecC--CCEEEEEeCCCCEEEEeCCCC--eeeEEEecCCcceEEEEEcC-------------CC
Q psy4650 114 CVQTLEGHGQNISAVCFHPE--LPIVITGSEDGSVRVWHSGTH--RLEISLTYGLERVWTISSLK-------------GS 176 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~--~~~l~s~~~d~~i~vwd~~~~--~~~~~~~~~~~~v~~v~~~~-------------~~ 176 (381)
....+.+|..+|.+++|+|+ +..+++|+.||.|++||+.++ .....+.+|...|.+++|+| ++
T Consensus 91 ~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~ 170 (753)
T 3jro_A 91 QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 170 (753)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGG
T ss_pred ccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCC
Confidence 67788899999999999999 899999999999999999887 34556678999999999999 58
Q ss_pred CEEEEEeCCCeEEEEecCCCceEEEecCCC----EEEEEecCceeecccccCCccccccCC---ceEEeeehHHHHHhcc
Q psy4650 177 NNVAIGYDEGSVLLKVGREEPAVSMDVNGC----KIIWARHSEVQQANLKTMPEVFENITA---GVVLTLSVHVTIKYRL 249 (381)
Q Consensus 177 ~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~d---g~~l~~~~~d~~~~~~ 249 (381)
..+++|+.||.+++ ||..++ .+......+ ...+ ..++|+|+ |..+++++.++....|
T Consensus 171 ~~l~sgs~dg~I~i----------wd~~~~~~~~~~~~~~~~h--~~~V----~~l~~sp~~~~~~~l~s~s~Dg~I~iw 234 (753)
T 3jro_A 171 RKFVTGGADNLVKI----------WKYNSDAQTYVLESTLEGH--SDWV----RDVAWSPTVLLRSYLASVSQDRTCIIW 234 (753)
T ss_dssp CCEEEEETTSCEEE----------EEEETTTTEEEEEEEECCC--SSCE----EEEEECCCCSSSEEEEEEESSSCEEEE
T ss_pred CEEEEEECCCeEEE----------EeccCCcccceeeeeecCC--CCcE----EEEEeccCCCCCCEEEEEecCCEEEEe
Confidence 99999999999999 555433 222211111 1111 11577899 9999999999999999
Q ss_pred CCCcC
Q psy4650 250 DISDS 254 (381)
Q Consensus 250 d~~~~ 254 (381)
++...
T Consensus 235 d~~~~ 239 (753)
T 3jro_A 235 TQDNE 239 (753)
T ss_dssp EESSS
T ss_pred cCCCC
Confidence 88653
No 75
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.88 E-value=2.4e-21 Score=169.44 Aligned_cols=143 Identities=11% Similarity=0.097 Sum_probs=114.9
Q ss_pred CCceEEEEEecCCeEEEecCCCccceeeEeecccc---ccEEEEEeeeCCCccEE------------EEEcCCCeEEEEE
Q psy4650 44 DMIEYKISYQESSRVKAFNPIQVATLILKTLYGHE---KGVNCVDYYHGGDKPYL------------ISGADDRLVKIWD 108 (381)
Q Consensus 44 ~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~---~~v~~~~~~~~~~~~~l------------~s~~~d~~v~vwd 108 (381)
+..+++++++.|++|++||+.+ ...++++.+|. ..+.+++|+|++. ++ ++|+.|+++++||
T Consensus 191 g~~~~LaSgS~D~TIkIWDl~T--Gk~l~tL~g~~~~v~~v~~vafSpdG~--~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 191 GMQEALLGTTIMNNIVIWNLKT--GQLLKKMHIDDSYQASVCHKAYSEMGL--LFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp TSTTEEEEEETTSEEEEEETTT--CCEEEEEECCC---CCCEEEEEEETTE--EEEEEC------------CCEEEEEEE
T ss_pred CCCceEEEecCCCcEEEEECCC--CcEEEEEcCCCcceeeeEEEEECCCCC--EEEEeccCCCcceeeccCCCcEEEEEE
Confidence 4467899999999999999974 56778888754 4677889999876 43 6789999999999
Q ss_pred CCCCeEEEEe-----ccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceE-EEEEcCCCCEEEEE
Q psy4650 109 YQNKTCVQTL-----EGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVW-TISSLKGSNNVAIG 182 (381)
Q Consensus 109 ~~~~~~~~~~-----~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~-~v~~~~~~~~l~~~ 182 (381)
..+++.+..+ .+|...+.+..+ ++..+++|+.|++|+|||+.+|+.+.++.+|...+. +++|+|+|++|++|
T Consensus 267 ~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSG 344 (356)
T 2w18_A 267 PKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAG 344 (356)
T ss_dssp TTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEE
T ss_pred CCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEE
Confidence 9999887665 467666544444 488999999999999999999999999998877655 58999999999999
Q ss_pred eCCCeEEEEe
Q psy4650 183 YDEGSVLLKV 192 (381)
Q Consensus 183 ~~dg~v~i~~ 192 (381)
+.|++|++|+
T Consensus 345 S~D~TIklWd 354 (356)
T 2w18_A 345 QKDGNIFVYH 354 (356)
T ss_dssp CTTSCEEEEE
T ss_pred ECCCcEEEec
Confidence 9999999953
No 76
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.2e-21 Score=182.02 Aligned_cols=203 Identities=10% Similarity=0.034 Sum_probs=155.9
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCC---cc-ceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECC-
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQ---VA-TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ- 110 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~---~~-~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~- 110 (381)
..++.+.+..+.++++|+.||+|++|++.. .. ......+ +|.+.|.+++|+|++. +|++|+.|++|++||+.
T Consensus 66 V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~--~l~s~s~dg~i~vwd~~~ 142 (437)
T 3gre_A 66 ITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFD--AFAVSSKDGQIIVLKVNH 142 (437)
T ss_dssp EEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSS--EEEEEETTSEEEEEEEEE
T ss_pred eEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCC--EEEEEeCCCEEEEEEecc
Confidence 456667772367999999999999999854 11 1112222 6999999999999776 89999999999999994
Q ss_pred --CCeEEEEecc------------CCCCEEEEE--EecCCCEEEEEeCCCCEEEEeCCCCeeeEEEec--CCcceEEEEE
Q psy4650 111 --NKTCVQTLEG------------HGQNISAVC--FHPELPIVITGSEDGSVRVWHSGTHRLEISLTY--GLERVWTISS 172 (381)
Q Consensus 111 --~~~~~~~~~~------------~~~~v~~~~--~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~--~~~~v~~v~~ 172 (381)
++.....+.+ +...+.++. ++|++..+++|+.|+.|++||+++++.+..+.. |...|.+++|
T Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~ 222 (437)
T 3gre_A 143 YQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICI 222 (437)
T ss_dssp EEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEE
T ss_pred ccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEE
Confidence 4443333322 445667776 557889999999999999999999999999988 7899999999
Q ss_pred cCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEec--CceeecccccCCccccccCCceEEeeehHHHHHhccC
Q psy4650 173 LKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARH--SEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLD 250 (381)
Q Consensus 173 ~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d 250 (381)
+|++.++++|+.||.+++ ||..++.++.... .......+.-. -.+++++..+++++.++.+++||
T Consensus 223 s~~~~~l~s~~~dg~i~i----------wd~~~~~~~~~~~~~~~~~v~~~~~~---~~~s~~~~~l~s~~~dg~i~iwd 289 (437)
T 3gre_A 223 DEECCVLILGTTRGIIDI----------WDIRFNVLIRSWSFGDHAPITHVEVC---QFYGKNSVIVVGGSSKTFLTIWN 289 (437)
T ss_dssp CTTSCEEEEEETTSCEEE----------EETTTTEEEEEEBCTTCEEEEEEEEC---TTTCTTEEEEEEESTTEEEEEEE
T ss_pred CCCCCEEEEEcCCCeEEE----------EEcCCccEEEEEecCCCCceEEEEec---cccCCCccEEEEEcCCCcEEEEE
Confidence 999999999999999999 7777777665543 12111111111 15678999999999999999999
Q ss_pred CCcC
Q psy4650 251 ISDS 254 (381)
Q Consensus 251 ~~~~ 254 (381)
+...
T Consensus 290 ~~~~ 293 (437)
T 3gre_A 290 FVKG 293 (437)
T ss_dssp TTTT
T ss_pred cCCC
Confidence 8643
No 77
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.88 E-value=8.5e-22 Score=181.51 Aligned_cols=202 Identities=12% Similarity=0.075 Sum_probs=165.9
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCcc------c-eeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVA------T-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~------~-~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd 108 (381)
...+.+.+++..++++++.|++|++||+.... . ..+..+.+|.+.|.+++|+|++. .++++++.|+.|++||
T Consensus 116 v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~v~iwd 194 (416)
T 2pm9_A 116 VKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLA-HVFASAGSSNFASIWD 194 (416)
T ss_dssp CCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCT-TEEEEESSSSCEEEEE
T ss_pred eEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCC-cEEEEEcCCCCEEEEE
Confidence 35677777767799999999999999997543 1 12334578999999999999843 3899999999999999
Q ss_pred CCCCeEEEEeccC------CCCEEEEEEecCC-CEEEEEeCCC---CEEEEeCCCC-eeeEEEe-cCCcceEEEEEcC-C
Q psy4650 109 YQNKTCVQTLEGH------GQNISAVCFHPEL-PIVITGSEDG---SVRVWHSGTH-RLEISLT-YGLERVWTISSLK-G 175 (381)
Q Consensus 109 ~~~~~~~~~~~~~------~~~v~~~~~~p~~-~~l~s~~~d~---~i~vwd~~~~-~~~~~~~-~~~~~v~~v~~~~-~ 175 (381)
+.+++.+..+..| ...|.+++|+|++ .++++++.|+ .|++||++++ .....+. +|...|.+++|+| +
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 274 (416)
T 2pm9_A 195 LKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQD 274 (416)
T ss_dssp TTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSC
T ss_pred CCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCC
Confidence 9999998888776 7889999999997 5899999998 9999999986 5677777 8999999999999 8
Q ss_pred CCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCc-eEEeeehHHHHHhccCCCcC
Q psy4650 176 SNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAG-VVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 176 ~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~d~~~~~~d~~~~ 254 (381)
+.++++++.||.+++ ||..++.++.....+.. . ...++|+|++ ..+++++.++..++|++...
T Consensus 275 ~~~l~s~~~dg~v~~----------wd~~~~~~~~~~~~~~~--~----v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 275 EHLLLSSGRDNTVLL----------WNPESAEQLSQFPARGN--W----CFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp SSCEEEEESSSEEEE----------ECSSSCCEEEEEECSSS--C----CCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred CCeEEEEeCCCCEEE----------eeCCCCccceeecCCCC--c----eEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 999999999999999 77777766655443211 1 1125788998 89999999999999998654
No 78
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.88 E-value=8e-21 Score=174.24 Aligned_cols=218 Identities=16% Similarity=0.077 Sum_probs=165.8
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCC-ccEEEEEcCCCeEEEEECCCCe
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGD-KPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~-~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
....+.+.++...++++++.||.|++|++.. ......+ .|...+.++.|+|.+. ..++++++.|+.|++||+.++.
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 177 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNT--LQTADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS 177 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTT--TEEEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCC--Cccceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc
Confidence 3456777776677999999999999999974 3334444 3788899999998542 3489999999999999999999
Q ss_pred EEEEeccCCCCEEEEEEecCCC-EEEEEeCCCCEEEEeCCCCe-eeEEE---------------ecCCcceEEEEEcCCC
Q psy4650 114 CVQTLEGHGQNISAVCFHPELP-IVITGSEDGSVRVWHSGTHR-LEISL---------------TYGLERVWTISSLKGS 176 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~~~-~l~s~~~d~~i~vwd~~~~~-~~~~~---------------~~~~~~v~~v~~~~~~ 176 (381)
.+..+.+|...|.+++|+|++. .+++|+.|+.|++||++++. ....+ ..|...|.+++|+|++
T Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 257 (408)
T 4a11_B 178 CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG 257 (408)
T ss_dssp CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS
T ss_pred eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCC
Confidence 9999999999999999999998 58999999999999998765 33333 4678899999999999
Q ss_pred CEEEEEeCCCeEEEEecCCCc----------------------------eEEEecCCCEEEEEecCceeecccccCCc--
Q psy4650 177 NNVAIGYDEGSVLLKVGREEP----------------------------AVSMDVNGCKIIWARHSEVQQANLKTMPE-- 226 (381)
Q Consensus 177 ~~l~~~~~dg~v~i~~~~~~~----------------------------~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-- 226 (381)
.++++++.||.+++|+..... +.....++...+|+.........+.++..
T Consensus 258 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v 337 (408)
T 4a11_B 258 LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTV 337 (408)
T ss_dssp SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCE
T ss_pred CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeE
Confidence 999999999999999844311 11111222334444433333333332221
Q ss_pred -cccccCCceEEeeehHHHHHhccCCCcCh
Q psy4650 227 -VFENITAGVVLTLSVHVTIKYRLDISDSH 255 (381)
Q Consensus 227 -~~~~~~dg~~l~~~~~d~~~~~~d~~~~~ 255 (381)
.++|+|+|..+++++.++..++|++....
T Consensus 338 ~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 338 DCCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred EEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 26789999999999999999999987643
No 79
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.3e-21 Score=182.64 Aligned_cols=203 Identities=11% Similarity=0.008 Sum_probs=160.9
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeec--cccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLY--GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~--~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
...+.+.+++..++++++.||+|++|++.......+..+. +|...|.+++|+|++. +|++|+.|+.+++|++.++.
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~--~l~~~~~~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT--TVIIADKFGDVYSIDINSIP 182 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS--EEEEEETTSEEEEEETTSCC
T ss_pred eEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC--EEEEEeCCCcEEEEecCCcc
Confidence 4567778875555689999999999998721234455555 6778999999999876 89999999999999998876
Q ss_pred EEE----EeccCCCCEEEEEEecC---CCEEEEEeCCCCEEEEeCCCCeeeEE-EecCCcceEEEEEcCCCCEEEEEeCC
Q psy4650 114 CVQ----TLEGHGQNISAVCFHPE---LPIVITGSEDGSVRVWHSGTHRLEIS-LTYGLERVWTISSLKGSNNVAIGYDE 185 (381)
Q Consensus 114 ~~~----~~~~~~~~v~~~~~~p~---~~~l~s~~~d~~i~vwd~~~~~~~~~-~~~~~~~v~~v~~~~~~~~l~~~~~d 185 (381)
... .+.+|...|.+++|+|+ +.++++|+.|+.|++||+.++..+.. +.+|...|.+++|+ ++.++++++.|
T Consensus 183 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d 261 (450)
T 2vdu_B 183 EEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD 261 (450)
T ss_dssp CSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS
T ss_pred cccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC
Confidence 443 77889999999999999 88999999999999999999988877 55799999999999 99999999999
Q ss_pred CeEEEEecCCCceEEEecCCCEEEEEecCceeeccc-------------------ccCCccccccCCceEEeeeh-HHHH
Q psy4650 186 GSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANL-------------------KTMPEVFENITAGVVLTLSV-HVTI 245 (381)
Q Consensus 186 g~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~dg~~l~~~~-~d~~ 245 (381)
+.+++ ||..++.++...........+ ......+.++|++.+++++. .++.
T Consensus 262 ~~v~v----------wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~ 331 (450)
T 2vdu_B 262 DKIFA----------WDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKC 331 (450)
T ss_dssp SEEEE----------EETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSE
T ss_pred CeEEE----------EECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCe
Confidence 99999 777666655544322100000 00011257789999999888 7888
Q ss_pred HhccCC
Q psy4650 246 KYRLDI 251 (381)
Q Consensus 246 ~~~~d~ 251 (381)
+++|++
T Consensus 332 i~iw~~ 337 (450)
T 2vdu_B 332 IIILEM 337 (450)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 889998
No 80
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.88 E-value=3e-21 Score=179.19 Aligned_cols=201 Identities=15% Similarity=0.203 Sum_probs=159.1
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccc-----eeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECC
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVAT-----LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 110 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~-----~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~ 110 (381)
.+.+...+++..++++++.||+|++|++..... .....+.+|...|.+++|+|++. .+|++++.|+.|++||+.
T Consensus 184 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~~l~s~~~dg~i~i~d~~ 262 (430)
T 2xyi_A 184 GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHE-SLFGSVADDQKLMIWDTR 262 (430)
T ss_dssp CCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCT-TEEEEEETTSEEEEEETT
T ss_pred eEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCC-CEEEEEeCCCeEEEEECC
Confidence 356777777666999999999999999965211 12456779999999999999544 389999999999999999
Q ss_pred CC---eEEEEeccCCCCEEEEEEecCCC-EEEEEeCCCCEEEEeCCC-CeeeEEEecCCcceEEEEEcCCCC-EEEEEeC
Q psy4650 111 NK---TCVQTLEGHGQNISAVCFHPELP-IVITGSEDGSVRVWHSGT-HRLEISLTYGLERVWTISSLKGSN-NVAIGYD 184 (381)
Q Consensus 111 ~~---~~~~~~~~~~~~v~~~~~~p~~~-~l~s~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~v~~~~~~~-~l~~~~~ 184 (381)
++ .....+..|...|.+++|+|++. .+++|+.||.|++||+++ +..+..+..|...|.+++|+|++. ++++++.
T Consensus 263 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~ 342 (430)
T 2xyi_A 263 NNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 342 (430)
T ss_dssp CSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEET
T ss_pred CCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeC
Confidence 87 56777889999999999999987 789999999999999997 567888889999999999999985 7999999
Q ss_pred CCeEEEEecCCCceEEEecCC--------------CEEEEEecCceeecccccCCccccccCCce-EEeeehHHHHHhcc
Q psy4650 185 EGSVLLKVGREEPAVSMDVNG--------------CKIIWARHSEVQQANLKTMPEVFENITAGV-VLTLSVHVTIKYRL 249 (381)
Q Consensus 185 dg~v~i~~~~~~~~~~~d~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~-~l~~~~~d~~~~~~ 249 (381)
||.+++| |... ..++.....+ ......+.|+|++. .+++++.++...+|
T Consensus 343 d~~i~iw----------d~~~~~~~~~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~p~~~~~l~s~s~dg~i~iw 406 (430)
T 2xyi_A 343 DRRLHVW----------DLSKIGEEQSTEDAEDGPPELLFIHGGH------TAKISDFSWNPNEPWIICSVSEDNIMQVW 406 (430)
T ss_dssp TSCCEEE----------EGGGTTCCCCHHHHHHCCTTEEEECCCC------SSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred CCcEEEE----------eCCCCccccCccccccCCcceEEEcCCC------CCCceEEEECCCCCCEEEEEECCCCEEEe
Confidence 9999995 4432 1122211111 01111267889998 88899999989999
Q ss_pred CCCc
Q psy4650 250 DISD 253 (381)
Q Consensus 250 d~~~ 253 (381)
++..
T Consensus 407 ~~~~ 410 (430)
T 2xyi_A 407 QMAE 410 (430)
T ss_dssp EECH
T ss_pred Eccc
Confidence 8753
No 81
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.88 E-value=9.6e-22 Score=183.01 Aligned_cols=204 Identities=12% Similarity=0.048 Sum_probs=153.8
Q ss_pred ceeeeecCCCc-eEEEEEecCCeEEEecCCCccce-------------------------------------ee-Eeecc
Q psy4650 36 KVDITTNKDMI-EYKISYQESSRVKAFNPIQVATL-------------------------------------IL-KTLYG 76 (381)
Q Consensus 36 ~~~i~~~~~~~-~~~~s~~~d~~v~i~~~~~~~~~-------------------------------------~~-~~l~~ 76 (381)
...+.+.+++. .++++++.|++|++|++...... .. ..+.+
T Consensus 96 V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (447)
T 3dw8_B 96 INKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANA 175 (447)
T ss_dssp CCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSC
T ss_pred eEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccC
Confidence 44567777643 68999999999999998542110 01 12468
Q ss_pred ccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCC-CeEEE-------EeccCCCCEEEEEEecCC-CEEEEEeCCCCEE
Q psy4650 77 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN-KTCVQ-------TLEGHGQNISAVCFHPEL-PIVITGSEDGSVR 147 (381)
Q Consensus 77 h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~-~~~~~-------~~~~~~~~v~~~~~~p~~-~~l~s~~~d~~i~ 147 (381)
|...|.+++|+|++. +|++| .|+.|++||+.+ +.... .+.+|...|.+++|+|++ ..+++|+.|+.|+
T Consensus 176 h~~~v~~~~~~~~~~--~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 176 HTYHINSISINSDYE--TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp CSSCCCEEEECTTSS--EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred CCcceEEEEEcCCCC--EEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEE
Confidence 999999999999876 78998 799999999984 34444 356899999999999998 8999999999999
Q ss_pred EEeCCCCee----eEEEecCCc------------ceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCC-CEEEE
Q psy4650 148 VWHSGTHRL----EISLTYGLE------------RVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNG-CKIIW 210 (381)
Q Consensus 148 vwd~~~~~~----~~~~~~~~~------------~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~-~~~~~ 210 (381)
+||++++.. ...+..+.. .|.+++|+|+|.++++++. |.+++ ||... +.++.
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~i----------wd~~~~~~~~~ 321 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKV----------WDLNMENRPVE 321 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEE----------EETTCCSSCSC
T ss_pred EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEE----------EeCCCCccccc
Confidence 999999887 678887776 8999999999999999999 99999 55543 33322
Q ss_pred EecCceeecc----------cccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 211 ARHSEVQQAN----------LKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 211 ~~~~~~~~~~----------~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
....+..... +.. ...++|+|+|..+++++.++..++|++...
T Consensus 322 ~~~~~~~~~~~l~~~~~~~~i~~-~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 322 TYQVHEYLRSKLCSLYENDCIFD-KFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp CEESCGGGTTTHHHHHHTSGGGC-CCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred eeecccccccccccccccccccc-ceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 2221110000 000 001578999999999999999999998654
No 82
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.1e-21 Score=194.48 Aligned_cols=205 Identities=15% Similarity=0.143 Sum_probs=159.9
Q ss_pred eeeeecCC-CceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCC--e
Q psy4650 37 VDITTNKD-MIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK--T 113 (381)
Q Consensus 37 ~~i~~~~~-~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~--~ 113 (381)
..+.+.++ .+.++++|+.||+|++|++..........+.+|...|.+++|+|++....+++|+.||+|++||+.++ .
T Consensus 57 ~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~ 136 (753)
T 3jro_A 57 WRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT 136 (753)
T ss_dssp EEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC
T ss_pred EEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc
Confidence 45556544 26799999999999999997644446778889999999999999821238999999999999999887 3
Q ss_pred EEEEeccCCCCEEEEEEec-------------CCCEEEEEeCCCCEEEEeCCCC----eeeEEEecCCcceEEEEEcCC-
Q psy4650 114 CVQTLEGHGQNISAVCFHP-------------ELPIVITGSEDGSVRVWHSGTH----RLEISLTYGLERVWTISSLKG- 175 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p-------------~~~~l~s~~~d~~i~vwd~~~~----~~~~~~~~~~~~v~~v~~~~~- 175 (381)
....+.+|...|.+++|+| ++..+++|+.||.|++||++++ .....+.+|...|.+++|+|+
T Consensus 137 ~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~ 216 (753)
T 3jro_A 137 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 216 (753)
T ss_dssp CCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred ceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCC
Confidence 4556778999999999999 4889999999999999999877 566778889999999999999
Q ss_pred --CCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCC
Q psy4650 176 --SNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 176 --~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~ 252 (381)
+.++++|+.||.+++ ||..++...+....... ....+....++|+|+|..+++++.++..+.|++.
T Consensus 217 ~~~~~l~s~s~Dg~I~i----------wd~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 217 LLRSYLASVSQDRTCII----------WTQDNEQGPWKKTLLKE-EKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp SSSEEEEEEESSSCEEE----------EEESSSSSCCBCCBSSS-SCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred CCCCEEEEEecCCEEEE----------ecCCCCCCcceeEEecc-CCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 899999999999999 55544321110000000 0011111125788999999999999999999876
No 83
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.88 E-value=1.3e-20 Score=176.56 Aligned_cols=194 Identities=15% Similarity=0.248 Sum_probs=161.0
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe---
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT--- 113 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~--- 113 (381)
..+...+++ ++++|+.||+|++||+.. ...+..+.+|.+.|.+++|++..+..++++|+.|++|++||+.++.
T Consensus 166 ~~l~~~~~~--~l~s~s~dg~i~vwd~~~--~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~ 241 (464)
T 3v7d_B 166 WALKYAHGG--ILVSGSTDRTVRVWDIKK--GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVP 241 (464)
T ss_dssp EEEEECSTT--EEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC-
T ss_pred EEEEEcCCC--EEEEEeCCCCEEEEECCC--CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccc
Confidence 445555543 899999999999999974 4567889999999999999975555589999999999999998764
Q ss_pred --------------------EEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEc
Q psy4650 114 --------------------CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSL 173 (381)
Q Consensus 114 --------------------~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~ 173 (381)
....+.+|...|.++ ++++..+++|+.|+.|++||+.+++.+..+.+|...|.+++|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~ 319 (464)
T 3v7d_B 242 DHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYD 319 (464)
T ss_dssp -----CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE
T ss_pred cccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEc
Confidence 255678898888887 6778999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 174 KGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 174 ~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
|++..+++|+.||.+++ ||..++.++.....+.. .+.. +.+ ++..+++++.++....|++..
T Consensus 320 ~~~~~l~sg~~dg~i~v----------wd~~~~~~~~~~~~h~~--~v~~----~~~--~~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 320 HERKRCISASMDTTIRI----------WDLENGELMYTLQGHTA--LVGL----LRL--SDKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp TTTTEEEEEETTSCEEE----------EETTTTEEEEEECCCSS--CEEE----EEE--CSSEEEEEETTSEEEEEETTT
T ss_pred CCCCEEEEEeCCCcEEE----------EECCCCcEEEEEeCCCC--cEEE----EEE--cCCEEEEEeCCCcEEEEECCC
Confidence 99999999999999999 88888887776643321 1111 223 367899999999999999875
Q ss_pred C
Q psy4650 254 S 254 (381)
Q Consensus 254 ~ 254 (381)
.
T Consensus 382 ~ 382 (464)
T 3v7d_B 382 Y 382 (464)
T ss_dssp C
T ss_pred C
Confidence 3
No 84
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.88 E-value=3.8e-20 Score=164.01 Aligned_cols=148 Identities=15% Similarity=0.222 Sum_probs=123.1
Q ss_pred eeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEe
Q psy4650 39 ITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 118 (381)
Q Consensus 39 i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~ 118 (381)
+..+++ .+|++ +.|++|++||+.+........+.+|...|.+++|+|++. ++++|+.|++|++||+.+++.+..+
T Consensus 31 l~WS~~--~~lAv-g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~--~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 31 VDWSSG--NVLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN--YLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp EEECTT--SEEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS--EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEECCC--CEEEE-EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCC--EEEEEECCCcEEEeecCCceeEEEe
Confidence 334444 25554 568999999997543333334567889999999999877 8999999999999999999999999
Q ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCC-eeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEec
Q psy4650 119 EGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTH-RLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVG 193 (381)
Q Consensus 119 ~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~-~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~ 193 (381)
.+|...+.++++ ++..+++++.++.+++|+...+ .....+.+|...+..+.+.+++.++++++.||.+++|+.
T Consensus 106 ~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 106 TSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp ECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred cCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEEC
Confidence 999988777655 5679999999999999999876 455677889999999999999999999999999999863
No 85
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.88 E-value=2e-21 Score=175.11 Aligned_cols=202 Identities=18% Similarity=0.251 Sum_probs=159.3
Q ss_pred cceeeeecCCCceEEEEEec---CCeEEEecCCCccceeeEeeccccccEEEEEeeeCC-CccEEEEEcCCCeEEEEECC
Q psy4650 35 TKVDITTNKDMIEYKISYQE---SSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGG-DKPYLISGADDRLVKIWDYQ 110 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~---d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~-~~~~l~s~~~d~~v~vwd~~ 110 (381)
....+.+.+++..++++++. |+.|++|++....... ....+|...|.+++|+|++ +..++++|+.|+.|++||+.
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 98 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL-LREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLE 98 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE-EEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTT
T ss_pred ceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc-eeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCC
Confidence 44677788887778888877 9999999997533222 2334899999999999973 02379999999999999999
Q ss_pred CCe-EEEEeccCCCCEEEEEE------ecCCCEEEEEeCCCCEEEEeCCCCe-eeEEEecCCc----ceEEEE----EcC
Q psy4650 111 NKT-CVQTLEGHGQNISAVCF------HPELPIVITGSEDGSVRVWHSGTHR-LEISLTYGLE----RVWTIS----SLK 174 (381)
Q Consensus 111 ~~~-~~~~~~~~~~~v~~~~~------~p~~~~l~s~~~d~~i~vwd~~~~~-~~~~~~~~~~----~v~~v~----~~~ 174 (381)
++. .+..+.+|...|.++.| +|++..+++++.|+.|++||+.++. ....+..+.. .+.+++ |+|
T Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 178 (357)
T 3i2n_A 99 APEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ 178 (357)
T ss_dssp SCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-
T ss_pred CCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC
Confidence 987 88899999999999965 6789999999999999999999887 6777765544 788888 788
Q ss_pred CCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccC---CceEEeeehHHHHHhccCC
Q psy4650 175 GSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENIT---AGVVLTLSVHVTIKYRLDI 251 (381)
Q Consensus 175 ~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---dg~~l~~~~~d~~~~~~d~ 251 (381)
++.++++++.||.+++ ||..++...+....... + ..+.|+| ++..+++++.++..+.|++
T Consensus 179 ~~~~l~~~~~d~~i~i----------~d~~~~~~~~~~~~~~~---v----~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 179 EERVVCAGYDNGDIKL----------FDLRNMALRWETNIKNG---V----CSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CCCEEEEEETTSEEEE----------EETTTTEEEEEEECSSC---E----EEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred CCCEEEEEccCCeEEE----------EECccCceeeecCCCCc---e----EEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 9999999999999999 78877776554322211 1 1156778 8999999999999999988
Q ss_pred CcC
Q psy4650 252 SDS 254 (381)
Q Consensus 252 ~~~ 254 (381)
...
T Consensus 242 ~~~ 244 (357)
T 3i2n_A 242 RTQ 244 (357)
T ss_dssp EEE
T ss_pred cCC
Confidence 653
No 86
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.88 E-value=6.6e-21 Score=170.60 Aligned_cols=185 Identities=16% Similarity=0.186 Sum_probs=147.2
Q ss_pred eeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCC-----eEEEEeccCCCCEEEEEEecCCCEEEEEeCC
Q psy4650 69 LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK-----TCVQTLEGHGQNISAVCFHPELPIVITGSED 143 (381)
Q Consensus 69 ~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~-----~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d 143 (381)
.+..+|+||.+.|++++|+|++. .+|+|||.|++|++||+.+. .+...+.+|...|.+++|+|++.++++++.|
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~-~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCT-TEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEECCccCCEEEEEEeCCCC-CEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 44568999999999999999743 38999999999999998764 3567889999999999999999999999999
Q ss_pred CCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCC--------------------------c
Q psy4650 144 GSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREE--------------------------P 197 (381)
Q Consensus 144 ~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~--------------------------~ 197 (381)
+.|++|+...+........+...+....+++++..+++++.|+.+++|+.... .
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 99999999999998888888889999999999999999999999999863211 0
Q ss_pred eEEEecCCCEEEEEecCceeecccccCCc---cccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 198 AVSMDVNGCKIIWARHSEVQQANLKTMPE---VFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 198 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
+++-..+....+|+.........+.++.. .++|+|+|..+++++.|+....||+...
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~ 247 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 247 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC
Confidence 11112223344555544444333333322 1578999999999999999999998653
No 87
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.88 E-value=5.6e-21 Score=178.93 Aligned_cols=186 Identities=23% Similarity=0.375 Sum_probs=156.8
Q ss_pred ceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCE
Q psy4650 46 IEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNI 125 (381)
Q Consensus 46 ~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v 125 (381)
+.++++|+.||+|++||... ...+..+.+|.+.|.+++|+|++ .+++|+.||+|++||+.++..+..+.+|.+.|
T Consensus 132 ~~~l~sgs~dg~i~vwd~~~--~~~~~~~~~h~~~V~~l~~~~~~---~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v 206 (464)
T 3v7d_B 132 DNYVITGADDKMIRVYDSIN--KKFLLQLSGHDGGVWALKYAHGG---ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTV 206 (464)
T ss_dssp TTEEEEEETTSCEEEEETTT--TEEEEEECCCSSCEEEEEECSTT---EEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCEEEEEcCCCcEEEEECCC--CcEEEEEeCCCcCEEEEEEcCCC---EEEEEeCCCCEEEEECCCCcEEEEECCCCCcc
Confidence 35899999999999999874 56778899999999999998865 79999999999999999999999999999999
Q ss_pred EEEEEec--CCCEEEEEeCCCCEEEEeCCCCee-----------------------eEEEecCCcceEEEEEcCCCCEEE
Q psy4650 126 SAVCFHP--ELPIVITGSEDGSVRVWHSGTHRL-----------------------EISLTYGLERVWTISSLKGSNNVA 180 (381)
Q Consensus 126 ~~~~~~p--~~~~l~s~~~d~~i~vwd~~~~~~-----------------------~~~~~~~~~~v~~v~~~~~~~~l~ 180 (381)
.+++|+| ++..+++|+.|+.|++||+.++.. ...+.+|...+.++ ++++.+++
T Consensus 207 ~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~ 284 (464)
T 3v7d_B 207 RCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVV 284 (464)
T ss_dssp EEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEE
T ss_pred EEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEE
Confidence 9999995 678999999999999999987653 44566788888777 56789999
Q ss_pred EEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 181 IGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 181 ~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
+|+.||.+++ ||..++..+.....+.. .+ ..+.++|++..+++++.++..+.|++...
T Consensus 285 ~~~~d~~i~v----------wd~~~~~~~~~~~~~~~--~v----~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 342 (464)
T 3v7d_B 285 SGSYDNTLIV----------WDVAQMKCLYILSGHTD--RI----YSTIYDHERKRCISASMDTTIRIWDLENG 342 (464)
T ss_dssp EEETTSCEEE----------EETTTTEEEEEECCCSS--CE----EEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred EEeCCCeEEE----------EECCCCcEEEEecCCCC--CE----EEEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence 9999999999 88888877766543211 11 11567899999999999999999998643
No 88
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.88 E-value=1.5e-21 Score=178.79 Aligned_cols=198 Identities=10% Similarity=0.143 Sum_probs=160.1
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCcc----ceeeEeeccccccEEEEEeeeC----C---CccEEEEEcCCCeEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVA----TLILKTLYGHEKGVNCVDYYHG----G---DKPYLISGADDRLVK 105 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~----~~~~~~l~~h~~~v~~~~~~~~----~---~~~~l~s~~~d~~v~ 105 (381)
..+.+.+ .++++++.||+|++|++.... ...+..+.+|...|.+++|+|+ + . +|++++.|+.|+
T Consensus 20 ~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~--~l~s~~~dg~i~ 94 (397)
T 1sq9_A 20 FSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC--LVATTSFSGDLL 94 (397)
T ss_dssp EEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE--EEEEEETTSCEE
T ss_pred EEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCcccc--EEEEEcCCCCEE
Confidence 4555655 699999999999999997533 2357788899999999999998 6 5 899999999999
Q ss_pred EEECCCCeE-----EEEeccC-----CCCEEEEEEe----cCCCE-EEEEeCCCCEEEEeCCC------CeeeE-----E
Q psy4650 106 IWDYQNKTC-----VQTLEGH-----GQNISAVCFH----PELPI-VITGSEDGSVRVWHSGT------HRLEI-----S 159 (381)
Q Consensus 106 vwd~~~~~~-----~~~~~~~-----~~~v~~~~~~----p~~~~-l~s~~~d~~i~vwd~~~------~~~~~-----~ 159 (381)
+||+.++.. ...+.+| ...|.+++|+ |++.. +++++.|+.|++||+.+ +..+. .
T Consensus 95 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 174 (397)
T 1sq9_A 95 FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLE 174 (397)
T ss_dssp EEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEE
T ss_pred EEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcce
Confidence 999998876 8888888 5899999999 99999 99999999999999998 66665 6
Q ss_pred Ee-------cCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecC---ce-eecccccCCccc
Q psy4650 160 LT-------YGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHS---EV-QQANLKTMPEVF 228 (381)
Q Consensus 160 ~~-------~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~---~~-~~~~~~~~~~~~ 228 (381)
+. .|...+.+++|+|++ .+++++.||.+++ ||..++.++..... +. ....+ ..+
T Consensus 175 ~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i----------~d~~~~~~~~~~~~~~~h~~~~~~i----~~i 239 (397)
T 1sq9_A 175 LQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQI----------SELSTLRPLYNFESQHSMINNSNSI----RSV 239 (397)
T ss_dssp EEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEE----------EETTTTEEEEEEECCC---CCCCCE----EEE
T ss_pred eeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEE----------EECCCCceeEEEeccccccccCCcc----ceE
Confidence 64 378899999999999 9999999999999 77777777766543 10 01111 125
Q ss_pred cccCCceEEeeehHH---HHHhccCCCcC
Q psy4650 229 ENITAGVVLTLSVHV---TIKYRLDISDS 254 (381)
Q Consensus 229 ~~~~dg~~l~~~~~d---~~~~~~d~~~~ 254 (381)
.|+|++..++++..+ +..+.||+...
T Consensus 240 ~~~~~~~~l~~~~~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 240 KFSPQGSLLAIAHDSNSFGCITLYETEFG 268 (397)
T ss_dssp EECSSTTEEEEEEEETTEEEEEEEETTTC
T ss_pred EECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 678999999999998 88999998643
No 89
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.87 E-value=8.6e-21 Score=172.17 Aligned_cols=153 Identities=10% Similarity=0.079 Sum_probs=127.0
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCC----eEEEEECCC
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDR----LVKIWDYQN 111 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~----~v~vwd~~~ 111 (381)
.+++.+.++ +.++++++.++ +.+|+.............+|...|.+++|+|++. ++++++.|+ .++.|+...
T Consensus 179 V~~v~fspd-g~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~--~l~~~s~d~~~~~~i~~~~~~~ 254 (365)
T 4h5i_A 179 VKDLHFSTD-GKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKINFIADDT--VLIAASLKKGKGIVLTKISIKS 254 (365)
T ss_dssp CCEEEECTT-SSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE--EEEEEEESSSCCEEEEEEEEET
T ss_pred eEEEEEccC-CceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC--EEEEEecCCcceeEEeeccccc
Confidence 456777877 55888888665 5555544433334455678999999999999887 788888877 688899877
Q ss_pred CeE----EEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEE-ecCCcceEEEEEcCCCCEEEEEeCCC
Q psy4650 112 KTC----VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL-TYGLERVWTISSLKGSNNVAIGYDEG 186 (381)
Q Consensus 112 ~~~----~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~-~~~~~~v~~v~~~~~~~~l~~~~~dg 186 (381)
... ...+.+|..+|.+++|+|+|++||+|+.|++|+|||+.+++++..+ .+|...|++++|+|+|++|++|+.|+
T Consensus 255 ~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 255 GNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp TEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTS
T ss_pred ceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCC
Confidence 643 4567889999999999999999999999999999999999999886 68999999999999999999999999
Q ss_pred eEEEEe
Q psy4650 187 SVLLKV 192 (381)
Q Consensus 187 ~v~i~~ 192 (381)
+|+||.
T Consensus 335 tvrvw~ 340 (365)
T 4h5i_A 335 TIHIIK 340 (365)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 999944
No 90
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.8e-21 Score=179.52 Aligned_cols=195 Identities=17% Similarity=0.220 Sum_probs=160.9
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
..+...++ ..+++++.+|.+++|++.. ...+..+.+|...|.+++|+|++. +|++++.|+.|++||+.+++...
T Consensus 210 ~~~~~~~~--~~~~~~~~~g~i~~~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~ 283 (425)
T 1r5m_A 210 VDVEWVDD--DKFVIPGPKGAIFVYQITE--KTPTGKLIGHHGPISVLEFNDTNK--LLLSASDDGTLRIWHGGNGNSQN 283 (425)
T ss_dssp SCCEEEET--TEEEEECGGGCEEEEETTC--SSCSEEECCCSSCEEEEEEETTTT--EEEEEETTSCEEEECSSSBSCSE
T ss_pred eEEEEcCC--CEEEEEcCCCeEEEEEcCC--CceeeeeccCCCceEEEEECCCCC--EEEEEcCCCEEEEEECCCCccce
Confidence 34444443 3588899999999999974 355677889999999999999876 89999999999999999999889
Q ss_pred EeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCC
Q psy4650 117 TLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREE 196 (381)
Q Consensus 117 ~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~ 196 (381)
.+.+|...|.+++|+|++ .+++++.|+.|++||+.+++.+..+..|...+.+++|+|++.++++++.||.+++|+
T Consensus 284 ~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~---- 358 (425)
T 1r5m_A 284 CFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYD---- 358 (425)
T ss_dssp EECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEE----
T ss_pred EecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEE----
Confidence 999999999999999999 999999999999999999999999999999999999999999999999999999954
Q ss_pred ceEEEecCCCE--------------------EEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCC
Q psy4650 197 PAVSMDVNGCK--------------------IIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 197 ~~~~~d~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~ 252 (381)
..++. ++.....+.... ....+.|+|+|..+++++.++..+.|++.
T Consensus 359 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 359 ------LKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDND----YIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ------CHHHHC--------------CEECCEEEEECCTTCCC----CEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred ------CCCCccceeeeecccccccCcccchhhhhhcCcccCC----ceEEEEccCCCceEEEEecCceEEEEeec
Confidence 43332 222222110000 11126788999999999999989888874
No 91
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.87 E-value=1.8e-21 Score=180.67 Aligned_cols=200 Identities=18% Similarity=0.142 Sum_probs=157.4
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCc--------cceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQV--------ATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~--------~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd 108 (381)
..+.+.+++..++++++.+|.|++|++... ....+..+.+|...|.+++|+|++.. +|++|+.||+|++|+
T Consensus 132 ~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-~l~s~~~dg~i~vwd 210 (430)
T 2xyi_A 132 NRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNG-YLLSASDDHTICLWD 210 (430)
T ss_dssp SEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTT-EEEEECTTSCEEEEE
T ss_pred EEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCC-eEEEEeCCCeEEEEe
Confidence 455666666779999999999999998641 14567788999999999999997653 899999999999999
Q ss_pred CCCCeE-------EEEeccCCCCEEEEEEec-CCCEEEEEeCCCCEEEEeCCCC---eeeEEEecCCcceEEEEEcCCCC
Q psy4650 109 YQNKTC-------VQTLEGHGQNISAVCFHP-ELPIVITGSEDGSVRVWHSGTH---RLEISLTYGLERVWTISSLKGSN 177 (381)
Q Consensus 109 ~~~~~~-------~~~~~~~~~~v~~~~~~p-~~~~l~s~~~d~~i~vwd~~~~---~~~~~~~~~~~~v~~v~~~~~~~ 177 (381)
+..+.. ...+.+|...|.+++|+| ++..+++++.|+.|++||++++ .....+..|...|++++|+|++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~ 290 (430)
T 2xyi_A 211 INATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSE 290 (430)
T ss_dssp TTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCT
T ss_pred CCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCC
Confidence 987421 456778999999999999 6679999999999999999987 57778888999999999999987
Q ss_pred -EEEEEeCCCeEEEEecCCCceEEEecCC-CEEEEEecCceeecccccCCccccccCCce-EEeeehHHHHHhccCCCc
Q psy4650 178 -NVAIGYDEGSVLLKVGREEPAVSMDVNG-CKIIWARHSEVQQANLKTMPEVFENITAGV-VLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 178 -~l~~~~~dg~v~i~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~-~l~~~~~d~~~~~~d~~~ 253 (381)
++++|+.||.+++| |.+. +.++.....+ .+....+.|+|++. ++++++.++...+|++..
T Consensus 291 ~~l~tg~~dg~v~vw----------d~~~~~~~~~~~~~h------~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 291 FILATGSADKTVALW----------DLRNLKLKLHSFESH------KDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TEEEEEETTSEEEEE----------ETTCTTSCSEEEECC------SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CEEEEEeCCCeEEEE----------eCCCCCCCeEEeecC------CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 78999999999995 4433 1111111111 00011156788885 688898999999999865
No 92
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.3e-20 Score=173.61 Aligned_cols=198 Identities=17% Similarity=0.217 Sum_probs=165.7
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 114 (381)
....+.+.++ +.++++++.||.|++|+. ....+..+.+|...|.+++|+|++. +|++++.|+.|++||+.++..
T Consensus 110 ~v~~~~~s~~-~~~l~~~~~dg~i~i~~~---~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~iwd~~~~~~ 183 (425)
T 1r5m_A 110 QVTCLAWSHD-GNSIVTGVENGELRLWNK---TGALLNVLNFHRAPIVSVKWNKDGT--HIISMDVENVTILWNVISGTV 183 (425)
T ss_dssp CEEEEEECTT-SSEEEEEETTSCEEEEET---TSCEEEEECCCCSCEEEEEECTTSS--EEEEEETTCCEEEEETTTTEE
T ss_pred ceEEEEEcCC-CCEEEEEeCCCeEEEEeC---CCCeeeeccCCCccEEEEEECCCCC--EEEEEecCCeEEEEECCCCcE
Confidence 3456667775 568999999999999994 4566788899999999999999776 899999999999999987654
Q ss_pred EE--------------------------------------------------------EeccCCCCEEEEEEecCCCEEE
Q psy4650 115 VQ--------------------------------------------------------TLEGHGQNISAVCFHPELPIVI 138 (381)
Q Consensus 115 ~~--------------------------------------------------------~~~~~~~~v~~~~~~p~~~~l~ 138 (381)
+. .+.+|...|.+++|+|++..++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 263 (425)
T 1r5m_A 184 MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLL 263 (425)
T ss_dssp EEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEE
T ss_pred EEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEE
Confidence 43 3346778899999999999999
Q ss_pred EEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceee
Q psy4650 139 TGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQ 218 (381)
Q Consensus 139 s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 218 (381)
+++.|+.|++||+.+++....+..|...+.+++|+|++ .+++++.||.+++ ||..++..+.....+..
T Consensus 264 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i----------~d~~~~~~~~~~~~~~~- 331 (425)
T 1r5m_A 264 SASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRL----------WSLKQNTLLALSIVDGV- 331 (425)
T ss_dssp EEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEE----------EETTTTEEEEEEECTTC-
T ss_pred EEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEE----------EECCCCcEeEecccCCc-
Confidence 99999999999999999999999999999999999999 9999999999999 78777777665543211
Q ss_pred cccccCCccccccCCceEEeeehHHHHHhccCCCcCh
Q psy4650 219 ANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDSH 255 (381)
Q Consensus 219 ~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~~ 255 (381)
.+ ..+.|+|+|..+++++.++...+|++....
T Consensus 332 -~i----~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 332 -PI----FAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp -CE----EEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred -cE----EEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 11 115678999999999999999999986543
No 93
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.87 E-value=1.2e-20 Score=173.35 Aligned_cols=200 Identities=15% Similarity=0.151 Sum_probs=154.1
Q ss_pred EEEEEecCCeEEEecCCCccceeeEeec-cccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEE
Q psy4650 48 YKISYQESSRVKAFNPIQVATLILKTLY-GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNIS 126 (381)
Q Consensus 48 ~~~s~~~d~~v~i~~~~~~~~~~~~~l~-~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~ 126 (381)
.+++++.|+.|++|+..... ....+. .|.+.|.+++|+|++. +|++|+.||.|++||+.+++.+..+.+|...|.
T Consensus 105 ~l~~~~~d~~v~lw~~~~~~--~~~~~~~~~~~~v~~v~~s~~~~--~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 180 (401)
T 4aez_A 105 NVVAVALERNVYVWNADSGS--VSALAETDESTYVASVKWSHDGS--FLSVGLGNGLVDIYDVESQTKLRTMAGHQARVG 180 (401)
T ss_dssp SEEEEEETTEEEEEETTTCC--EEEEEECCTTCCEEEEEECTTSS--EEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred CEEEEECCCeEEEeeCCCCc--EeEeeecCCCCCEEEEEECCCCC--EEEEECCCCeEEEEECcCCeEEEEecCCCCceE
Confidence 47788999999999997533 333433 3899999999999776 899999999999999999999999999999999
Q ss_pred EEEEecCCCEEEEEeCCCCEEEEeCC-CCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCC---------
Q psy4650 127 AVCFHPELPIVITGSEDGSVRVWHSG-THRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREE--------- 196 (381)
Q Consensus 127 ~~~~~p~~~~l~s~~~d~~i~vwd~~-~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~--------- 196 (381)
+++|+ +..+++|+.|+.|++||++ .+.....+.+|...|.+++|+|++.++++|+.||.+++|+....
T Consensus 181 ~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 258 (401)
T 4aez_A 181 CLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNH 258 (401)
T ss_dssp EEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCC
T ss_pred EEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCC
Confidence 99994 5799999999999999999 56678888899999999999999999999999999999873210
Q ss_pred ----ceEEEec-------------CCCEEEEEecCceeecccccC--CccccccCCceEEee--ehHHHHHhccCCCc
Q psy4650 197 ----PAVSMDV-------------NGCKIIWARHSEVQQANLKTM--PEVFENITAGVVLTL--SVHVTIKYRLDISD 253 (381)
Q Consensus 197 ----~~~~~d~-------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dg~~l~~--~~~d~~~~~~d~~~ 253 (381)
..+.|.+ ++...+|+.........+... ...+.|+|+|..+++ +..++....|++..
T Consensus 259 ~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 259 NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 0011111 222334443333222222111 112678999999998 55888888998754
No 94
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.87 E-value=5.9e-21 Score=177.50 Aligned_cols=186 Identities=10% Similarity=0.150 Sum_probs=140.5
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccc-----cEEEEEeeeCCCccEEEEEcCCCeEEEEE
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEK-----GVNCVDYYHGGDKPYLISGADDRLVKIWD 108 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~-----~v~~~~~~~~~~~~~l~s~~~d~~v~vwd 108 (381)
.....+.+.|+ +..+++++.||++++|+.. ..+..+. |.. .|.+++|||+|. +|++|+.||+|++||
T Consensus 86 ~~V~~vawSPd-G~~LAs~s~dg~V~iwd~~----~~l~~l~-~~~~~~~~sv~svafSPDG~--~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 86 CYPRVCKPSPI-DDWMAVLSNNGNVSVFKDN----KMLTNLD-SKGNLSSRTYHCFEWNPIES--SIVVGNEDGELQFFS 157 (588)
T ss_dssp CCEEEEEECSS-SSCEEEEETTSCEEEEETT----EEEEECC-CSSCSTTTCEEEEEECSSSS--CEEEEETTSEEEEEE
T ss_pred CcEEEEEECCC-CCEEEEEeCCCcEEEEeCC----ceeeecc-CCCccccccEEEEEEcCCCC--EEEEEcCCCEEEEEE
Confidence 34567778887 6689999999999999953 2666677 766 499999999887 899999999999999
Q ss_pred CCCCe-------EEEEe----ccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCee---eEEE-ecCCcceEEEEEc
Q psy4650 109 YQNKT-------CVQTL----EGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRL---EISL-TYGLERVWTISSL 173 (381)
Q Consensus 109 ~~~~~-------~~~~~----~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~---~~~~-~~~~~~v~~v~~~ 173 (381)
+.++. .+.++ .+|.+.|.+++|+|+| +++++.|+++++||+.++.. ..++ .+|...|.+++|+
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE
T ss_pred CCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE
Confidence 99875 35666 6788899999999999 88889999999999988774 3556 4688899999999
Q ss_pred CCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEE-EEEecCceeecccccCCccccc--cCCceEEeeehHHHHHhccC
Q psy4650 174 KGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKI-IWARHSEVQQANLKTMPEVFEN--ITAGVVLTLSVHVTIKYRLD 250 (381)
Q Consensus 174 ~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~dg~~l~~~~~d~~~~~~d 250 (381)
|..+++++ ++.+++ ||..++.. ..... +...+.. +.+ +||+..+++++.++. ..|.
T Consensus 236 --g~~LASa~-~~tIkL----------Wd~~~~~~~~~~~g---h~~~V~~----va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 236 --DYKVVLTC-PGYVHK----------IDLKNYSISSLKTG---SLENFHI----IPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp --TTEEEEEC-SSEEEE----------EETTTTEEEEEECS---CCSCCCE----EEETTCSSCEEEEECSSCEE-EEEE
T ss_pred --CCEEEEEe-CCeEEE----------EECCCCeEEEEEcC---CCceEEE----EEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 68999887 699999 66655555 22211 1111111 244 566666666665555 4443
No 95
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.87 E-value=8.9e-21 Score=176.18 Aligned_cols=207 Identities=13% Similarity=0.113 Sum_probs=157.1
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCc-cceeeEeecc------------ccccEEEEEeeeCCCccEEEEEcCCC
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQV-ATLILKTLYG------------HEKGVNCVDYYHGGDKPYLISGADDR 102 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~-~~~~~~~l~~------------h~~~v~~~~~~~~~~~~~l~s~~~d~ 102 (381)
...+.+.++ ..++++++.||+|++|++... ....+..+.+ +...+.++.+....+..++++|+.|+
T Consensus 114 v~~~~~~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 192 (437)
T 3gre_A 114 VTQITMIPN-FDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLS 192 (437)
T ss_dssp EEEEEECTT-SSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTS
T ss_pred EEEEEEeCC-CCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCC
Confidence 345666664 568999999999999998421 1112222221 55677777754433445899999999
Q ss_pred eEEEEECCCCeEEEEecc--CCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEe-cCCcceEEEEEcC----C
Q psy4650 103 LVKIWDYQNKTCVQTLEG--HGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLT-YGLERVWTISSLK----G 175 (381)
Q Consensus 103 ~v~vwd~~~~~~~~~~~~--~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~v~~~~----~ 175 (381)
.|++||+.+++.+..+.+ |.+.|.+++|+|++.++++|+.||.|++||+++++.+..+. .|...|.+++|+| +
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~ 272 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKN 272 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTT
T ss_pred eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCC
Confidence 999999999999999988 88999999999999999999999999999999999999886 6778999996664 5
Q ss_pred CCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecc---------------ccc--C---CccccccCCce
Q psy4650 176 SNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQAN---------------LKT--M---PEVFENITAGV 235 (381)
Q Consensus 176 ~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---------------~~~--~---~~~~~~~~dg~ 235 (381)
+.++++|+.||.+++ ||..++..+.....+..... +.+ + ...++++ ++.
T Consensus 273 ~~~l~s~~~dg~i~i----------wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~ 341 (437)
T 3gre_A 273 SVIVVGGSSKTFLTI----------WNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK 341 (437)
T ss_dssp EEEEEEESTTEEEEE----------EETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE
T ss_pred ccEEEEEcCCCcEEE----------EEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce
Confidence 779999999999999 77777776655443211110 001 0 0114566 779
Q ss_pred EEeeehHHHHHhccCCCcC
Q psy4650 236 VLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 236 ~l~~~~~d~~~~~~d~~~~ 254 (381)
.+++++.|+.++.|++...
T Consensus 342 ~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 342 ILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp EEEEEGGGTEEEEEETTCG
T ss_pred EEEecCCCCeEEEEECCCc
Confidence 9999999999999998754
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.87 E-value=3e-21 Score=194.46 Aligned_cols=200 Identities=11% Similarity=0.061 Sum_probs=158.9
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
..++.++++ +.++++|+.||+|++|+... ...... ..|...|.+++|+| +. +|++++.|++|++||+.+++.+
T Consensus 20 V~~lafspd-g~~lAsgs~Dg~I~lw~~~~--~~~~~~-~~~~~~V~~l~fsp-g~--~L~S~s~D~~v~lWd~~~~~~~ 92 (902)
T 2oaj_A 20 PIAAAFDFT-QNLLAIATVTGEVHIYGQQQ--VEVVIK-LEDRSAIKEMRFVK-GI--YLVVINAKDTVYVLSLYSQKVL 92 (902)
T ss_dssp EEEEEEETT-TTEEEEEETTSEEEEECSTT--CEEEEE-CSSCCCEEEEEEET-TT--EEEEEETTCEEEEEETTTCSEE
T ss_pred cEEEEECCC-CCEEEEEeCCCEEEEEeCCC--cEEEEE-cCCCCCEEEEEEcC-CC--EEEEEECcCeEEEEECCCCcEE
Confidence 456777777 56999999999999999853 223333 35888999999999 55 8999999999999999999988
Q ss_pred EEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeee-----------EEEecCCcceEEEEEcCC-CCEEEEEe
Q psy4650 116 QTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLE-----------ISLTYGLERVWTISSLKG-SNNVAIGY 183 (381)
Q Consensus 116 ~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~-----------~~~~~~~~~v~~v~~~~~-~~~l~~~~ 183 (381)
..+. |.+.|.+++|+|++.++++|+.||.|++||+.++... ..+.+|...|.+++|+|+ +..+++|+
T Consensus 93 ~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~ 171 (902)
T 2oaj_A 93 TTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY 171 (902)
T ss_dssp EEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC
T ss_pred EEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEe
Confidence 8886 7789999999999999999999999999999988763 223568889999999996 57899999
Q ss_pred CCCeEEEEecCCCceEEEecCCCEEEEEecCceeecc---------cc---cCCccccccCCceEEeeehHHHHHhccCC
Q psy4650 184 DEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQAN---------LK---TMPEVFENITAGVVLTLSVHVTIKYRLDI 251 (381)
Q Consensus 184 ~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---------~~---~~~~~~~~~~dg~~l~~~~~d~~~~~~d~ 251 (381)
.||.+ + ||..++.++.....+..... .. .....++|+|||..+++++.|+.+..||+
T Consensus 172 ~dg~v-l----------Wd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~ 240 (902)
T 2oaj_A 172 EYVTL-T----------YSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDA 240 (902)
T ss_dssp SSCEE-E----------EETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred CCCcE-E----------EECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 99999 9 77777776655433210000 00 11112688999999999999999999998
Q ss_pred CcC
Q psy4650 252 SDS 254 (381)
Q Consensus 252 ~~~ 254 (381)
...
T Consensus 241 ~~g 243 (902)
T 2oaj_A 241 NSG 243 (902)
T ss_dssp TTC
T ss_pred CCC
Confidence 654
No 97
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.87 E-value=6.4e-21 Score=192.06 Aligned_cols=148 Identities=13% Similarity=0.060 Sum_probs=123.6
Q ss_pred ecCCCceEEEEEecCCeEEEecCCCccce---eeE-eec-----cccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCC
Q psy4650 41 TNKDMIEYKISYQESSRVKAFNPIQVATL---ILK-TLY-----GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 111 (381)
Q Consensus 41 ~~~~~~~~~~s~~~d~~v~i~~~~~~~~~---~~~-~l~-----~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~ 111 (381)
+.++ +.++++|+.|++|++||....... .+. .+. +|...|.+++|+|++. +||+|+.||+|++||+.+
T Consensus 443 ~spd-g~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~--~LAsgs~DgtV~lwd~~~ 519 (902)
T 2oaj_A 443 PAEY-GTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETL--ELAVSIETGDVVLFKYEV 519 (902)
T ss_dssp CCSE-EEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTT--EEEEEETTSCEEEEEEEE
T ss_pred cccc-CcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCC--eEEEEecCcEEEEEEecC
Confidence 3444 679999999999999998653211 011 122 8999999999999887 899999999999999976
Q ss_pred C---------------------------------------------eEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCE
Q psy4650 112 K---------------------------------------------TCVQTLEGHGQNISAVCFHPELPIVITGSEDGSV 146 (381)
Q Consensus 112 ~---------------------------------------------~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i 146 (381)
+ .++..+.+|.++|++++|+|+| +||+|+.|++|
T Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv 598 (902)
T 2oaj_A 520 NQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSL 598 (902)
T ss_dssp CCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEE
T ss_pred ccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcE
Confidence 5 2467788999999999999999 99999999999
Q ss_pred EEEeCCCCeeeEE-----Ee-cCCcceEEEEEc-----CCC---CEEEEEeCCCeEEEEe
Q psy4650 147 RVWHSGTHRLEIS-----LT-YGLERVWTISSL-----KGS---NNVAIGYDEGSVLLKV 192 (381)
Q Consensus 147 ~vwd~~~~~~~~~-----~~-~~~~~v~~v~~~-----~~~---~~l~~~~~dg~v~i~~ 192 (381)
++||+.++..+.. +. +|...|++++|+ |+| .+|++|+.||++++|+
T Consensus 599 ~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd 658 (902)
T 2oaj_A 599 MLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYK 658 (902)
T ss_dssp EEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEE
T ss_pred EEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEE
Confidence 9999988876542 22 788899999999 885 7999999999999965
No 98
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.5e-20 Score=164.72 Aligned_cols=182 Identities=13% Similarity=0.163 Sum_probs=152.7
Q ss_pred ceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeee-CCCccEEEEEcCCCeEEEEECCCCeEEEEecc-CCC
Q psy4650 46 IEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYH-GGDKPYLISGADDRLVKIWDYQNKTCVQTLEG-HGQ 123 (381)
Q Consensus 46 ~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~-~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~-~~~ 123 (381)
+.++++++.|+.+++||. ......+.+|...+.++.|+| ++. ++++++.|+.|++|| .+.....+.. |..
T Consensus 114 ~~~l~~~~~d~~i~~~d~----~~~~~~~~~~~~~v~~~~~~~~~~~--~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~ 185 (313)
T 3odt_A 114 DGVVISGSWDKTAKVWKE----GSLVYNLQAHNASVWDAKVVSFSEN--KFLTASADKTIKLWQ--NDKVIKTFSGIHND 185 (313)
T ss_dssp TTEEEEEETTSEEEEEET----TEEEEEEECCSSCEEEEEEEETTTT--EEEEEETTSCEEEEE--TTEEEEEECSSCSS
T ss_pred CCEEEEEeCCCCEEEEcC----CcEEEecccCCCceeEEEEccCCCC--EEEEEECCCCEEEEe--cCceEEEEeccCcc
Confidence 458999999999999993 456678889999999999998 555 899999999999999 4566777777 889
Q ss_pred CEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEec
Q psy4650 124 NISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDV 203 (381)
Q Consensus 124 ~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~ 203 (381)
.+.+++|+|++. +++++.|+.|++||+++++.+..+..|...+.+++|+|++ .+++++.||.+++ ||.
T Consensus 186 ~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~i----------wd~ 253 (313)
T 3odt_A 186 VVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRI----------WSK 253 (313)
T ss_dssp CEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEE----------ECT
T ss_pred cEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEE----------EEC
Confidence 999999999998 9999999999999999999999999999999999999999 5889999999999 777
Q ss_pred CCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 204 NGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
.++.++.....+.. .+ ..+.|+|+|. +++++.++..+.|++...
T Consensus 254 ~~~~~~~~~~~~~~--~i----~~~~~~~~~~-~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 254 ENGSLKQVITLPAI--SI----WSVDCMSNGD-IIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp TTCCEEEEEECSSS--CE----EEEEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred CCCceeEEEeccCc--eE----EEEEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence 77766655433211 11 1156789998 556888889999998754
No 99
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.86 E-value=9.8e-21 Score=171.16 Aligned_cols=210 Identities=10% Similarity=0.009 Sum_probs=145.6
Q ss_pred cCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCC---------------c--------------
Q psy4650 42 NKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGD---------------K-------------- 92 (381)
Q Consensus 42 ~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~---------------~-------------- 92 (381)
......+.++++.+++|++||..+ ...+..+. |...|.++.|+++.. .
T Consensus 67 ~~~~~~~~~~~~~d~~v~iWd~~~--~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~ 143 (355)
T 3vu4_A 67 LHRTNYVAFVTGVKEVVHIWDDVK--KQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVC 143 (355)
T ss_dssp CTTSSEEEEECSSTTEEEEEETTT--TEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEE
T ss_pred cCCCCEEEEEECCccEEEEEECCC--CcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceE
Confidence 344344557788889999999864 34455554 566788887765320 0
Q ss_pred ----cEEEE--EcCCCeEEEEECCCCe---------------E-EEEeccCCCCEEEEEEecCCCEEEEEeCCCC-EEEE
Q psy4650 93 ----PYLIS--GADDRLVKIWDYQNKT---------------C-VQTLEGHGQNISAVCFHPELPIVITGSEDGS-VRVW 149 (381)
Q Consensus 93 ----~~l~s--~~~d~~v~vwd~~~~~---------------~-~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~-i~vw 149 (381)
.+++. |+.||.|++||+.++. + +..+.+|.++|.+++|+|++.++++|+.|++ |++|
T Consensus 144 ~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iw 223 (355)
T 3vu4_A 144 EFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVF 223 (355)
T ss_dssp EEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEE
T ss_pred EEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 13333 6889999999998765 2 6788999999999999999999999999999 9999
Q ss_pred eCCCCeeeEEEe-c-CCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCE-------EEEEecCceeecc
Q psy4650 150 HSGTHRLEISLT-Y-GLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCK-------IIWARHSEVQQAN 220 (381)
Q Consensus 150 d~~~~~~~~~~~-~-~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~-------~~~~~~~~~~~~~ 220 (381)
|+.+++.+..+. + |...|.+++|+|+|++|++++.|+.+++|+-..........-.+. ..|..........
T Consensus 224 d~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (355)
T 3vu4_A 224 KTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVD 303 (355)
T ss_dssp ETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCC
T ss_pred ECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccC
Confidence 999999999998 5 899999999999999999999999999966432211000000000 0000000000000
Q ss_pred cccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 221 LKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 221 ~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
.......++|++||..++++..++..+.|++...
T Consensus 304 ~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 304 KHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp TTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred CCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 0000022678999999999999888888876543
No 100
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.86 E-value=2e-20 Score=167.40 Aligned_cols=154 Identities=20% Similarity=0.247 Sum_probs=130.8
Q ss_pred ceeeeecCC-CceEEEEEecCCeEEEecCCCccc-------eeeEeeccccccEEEEEeeeC--CCccEEEEEcCCCeEE
Q psy4650 36 KVDITTNKD-MIEYKISYQESSRVKAFNPIQVAT-------LILKTLYGHEKGVNCVDYYHG--GDKPYLISGADDRLVK 105 (381)
Q Consensus 36 ~~~i~~~~~-~~~~~~s~~~d~~v~i~~~~~~~~-------~~~~~l~~h~~~v~~~~~~~~--~~~~~l~s~~~d~~v~ 105 (381)
...+.+.+. .+.++++++.||+|++|++..... ..+..+.+|.+.|.+++|+|+ +. ++++++.|+.|+
T Consensus 60 v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~l~~~~~dg~v~ 137 (351)
T 3f3f_A 60 IVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL--KLACLGNDGILR 137 (351)
T ss_dssp EEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS--EEEEEETTCEEE
T ss_pred EEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc--EEEEecCCCcEE
Confidence 345666663 367999999999999999865321 457788899999999999998 55 899999999999
Q ss_pred EEECCCCe------------------------------------------------------------EEEEeccCCCCE
Q psy4650 106 IWDYQNKT------------------------------------------------------------CVQTLEGHGQNI 125 (381)
Q Consensus 106 vwd~~~~~------------------------------------------------------------~~~~~~~~~~~v 125 (381)
+||+.++. .+..+.+|...|
T Consensus 138 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i 217 (351)
T 3f3f_A 138 LYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLI 217 (351)
T ss_dssp EEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCE
T ss_pred EecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcce
Confidence 99986532 145567899999
Q ss_pred EEEEEecCC----CEEEEEeCCCCEEEEeCCCC----------------------------------------------e
Q psy4650 126 SAVCFHPEL----PIVITGSEDGSVRVWHSGTH----------------------------------------------R 155 (381)
Q Consensus 126 ~~~~~~p~~----~~l~s~~~d~~i~vwd~~~~----------------------------------------------~ 155 (381)
.+++|+|++ .++++|+.|+.|++||+..+ .
T Consensus 218 ~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (351)
T 3f3f_A 218 RSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVE 297 (351)
T ss_dssp EEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEE
T ss_pred eEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeeccccccc
Confidence 999999998 79999999999999999865 5
Q ss_pred eeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy4650 156 LEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLK 191 (381)
Q Consensus 156 ~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~ 191 (381)
.+..+.+|...|++++|+|++++|++|+.||.+++|
T Consensus 298 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw 333 (351)
T 3f3f_A 298 LLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLW 333 (351)
T ss_dssp EEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEE
T ss_pred EEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 667778899999999999999999999999999993
No 101
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.86 E-value=4.7e-21 Score=172.67 Aligned_cols=204 Identities=16% Similarity=0.149 Sum_probs=154.9
Q ss_pred ceeeeecCCC--ceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEe------eeCCCccEEEEEcCCCeEEEE
Q psy4650 36 KVDITTNKDM--IEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDY------YHGGDKPYLISGADDRLVKIW 107 (381)
Q Consensus 36 ~~~i~~~~~~--~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~------~~~~~~~~l~s~~~d~~v~vw 107 (381)
...+.+.++. +.++++++.||.|++|++.... ..+..+.+|.+.|.++.| +|++. +|++|+.|+.|++|
T Consensus 68 v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~s~~~~--~l~~~~~d~~i~vw 144 (357)
T 3i2n_A 68 IKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE-MPVYSVKGHKEIINAIDGIGGLGIGEGAP--EIVTGSRDGTVKVW 144 (357)
T ss_dssp EEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS-SCSEEECCCSSCEEEEEEESGGGCC-CCC--EEEEEETTSCEEEE
T ss_pred EEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC-ccEEEEEecccceEEEeeccccccCCCcc--EEEEEeCCCeEEEE
Confidence 3466667764 6799999999999999997532 356788999999999966 45555 89999999999999
Q ss_pred ECCCCe-EEEEeccCCC----CEEEEE----EecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcC---C
Q psy4650 108 DYQNKT-CVQTLEGHGQ----NISAVC----FHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLK---G 175 (381)
Q Consensus 108 d~~~~~-~~~~~~~~~~----~v~~~~----~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~---~ 175 (381)
|+.++. ....+..|.+ .+.+++ |+|++..+++++.|+.|++||+++++.... ..+...+.+++|+| +
T Consensus 145 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~ 223 (357)
T 3i2n_A 145 DPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDIS 223 (357)
T ss_dssp CTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSS
T ss_pred eCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCC
Confidence 999886 6777766554 788988 678999999999999999999999987554 55788999999999 8
Q ss_pred CCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCce-EEeeehHHHHHhccCCCcC
Q psy4650 176 SNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGV-VLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 176 ~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~-~l~~~~~d~~~~~~d~~~~ 254 (381)
+..+++++.||.+++ ||..++.+............ ......+.|+|++. ++++++.++..+.|++...
T Consensus 224 ~~~l~~~~~dg~i~i----------~d~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 224 MNKLVATSLEGKFHV----------FDMRTQHPTKGFASVSEKAH-KSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp CCEEEEEESTTEEEE----------EEEEEEETTTEEEEEEEECC-SSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred CCEEEEECCCCeEEE----------EeCcCCCcccceeeeccCCC-cCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 999999999999999 55543332111100000000 01111157889998 8999999999999998654
No 102
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.86 E-value=8.8e-20 Score=161.19 Aligned_cols=207 Identities=16% Similarity=0.188 Sum_probs=157.6
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCC---e
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK---T 113 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~---~ 113 (381)
..+.+ ++ +.++++++.||.|++|++.. ......+.+|.+.|.+++|+|++. ++++|+.|+.+++|++... .
T Consensus 22 ~~~~~-~~-~~~l~s~~~dg~v~vw~~~~--~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~~~~~~~~~~~~ 95 (313)
T 3odt_A 22 RDVVA-VD-DSKVASVSRDGTVRLWSKDD--QWLGTVVYTGQGFLNSVCYDSEKE--LLLFGGKDTMINGVPLFATSGED 95 (313)
T ss_dssp EEEEE-EE-TTEEEEEETTSEEEEEEESS--SEEEEEEEECSSCEEEEEEETTTT--EEEEEETTSCEEEEETTCCTTSC
T ss_pred EEEEe-cC-CCEEEEEEcCCcEEEEECCC--CEEEEEeecCCccEEEEEECCCCC--EEEEecCCCeEEEEEeeecCCCC
Confidence 34445 43 45799999999999999863 456677889999999999999876 8999999999999998764 5
Q ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcC-CCCEEEEEeCCCeEEEEe
Q psy4650 114 CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLK-GSNNVAIGYDEGSVLLKV 192 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~-~~~~l~~~~~dg~v~i~~ 192 (381)
....+.+|...|.+++| ++..+++++.|+.|++|| .+.....+..|...+.++.|+| ++..+++++.||.+++|+
T Consensus 96 ~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d 171 (313)
T 3odt_A 96 PLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ 171 (313)
T ss_dssp C-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred cccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe
Confidence 67778899999999999 567999999999999999 7788888899999999999998 899999999999999986
Q ss_pred cCC---------------------CceEEEecCCCEEEEEecCceeecccccCCc---cccccCCceEEeeehHHHHHhc
Q psy4650 193 GRE---------------------EPAVSMDVNGCKIIWARHSEVQQANLKTMPE---VFENITAGVVLTLSVHVTIKYR 248 (381)
Q Consensus 193 ~~~---------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~dg~~l~~~~~d~~~~~ 248 (381)
... ..++.-..++...+|+.........+.++.. .+.|+|+| .+++++.++..+.
T Consensus 172 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~i 250 (313)
T 3odt_A 172 NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRI 250 (313)
T ss_dssp TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEE
T ss_pred cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEE
Confidence 211 1122222222334444443333333322221 25778888 5788888888899
Q ss_pred cCCCcC
Q psy4650 249 LDISDS 254 (381)
Q Consensus 249 ~d~~~~ 254 (381)
|++...
T Consensus 251 wd~~~~ 256 (313)
T 3odt_A 251 WSKENG 256 (313)
T ss_dssp ECTTTC
T ss_pred EECCCC
Confidence 988653
No 103
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.85 E-value=6.8e-20 Score=168.05 Aligned_cols=216 Identities=13% Similarity=0.082 Sum_probs=159.8
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEee-----------ccccccEEEEEeeeCCCccEEEEEcCCCe
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTL-----------YGHEKGVNCVDYYHGGDKPYLISGADDRL 103 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l-----------~~h~~~v~~~~~~~~~~~~~l~s~~~d~~ 103 (381)
...++.+.+..+.++++++.||.|++|++........... .+|...|.+++|+|++. .++++++.|+.
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~d~~ 123 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT-GMFTSSSFDKT 123 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT-TCEEEEETTSE
T ss_pred cEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC-cEEEEEeCCCe
Confidence 3456667773467999999999999999975332222111 36999999999999433 27999999999
Q ss_pred EEEEECCCCeEEEEeccCCCCEEEEEEecCCC---EEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCC-EE
Q psy4650 104 VKIWDYQNKTCVQTLEGHGQNISAVCFHPELP---IVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSN-NV 179 (381)
Q Consensus 104 v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~---~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~l 179 (381)
|++||+.++.....+. +...+.++.|+|.+. .+++++.|+.|++||+.++.....+..|...|.+++|+|++. .+
T Consensus 124 i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll 202 (408)
T 4a11_B 124 LKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYIL 202 (408)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEE
T ss_pred EEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEE
Confidence 9999999999888777 778899999999554 999999999999999999999999999999999999999998 59
Q ss_pred EEEeCCCeEEEEecCCC--ceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 180 AIGYDEGSVLLKVGREE--PAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 180 ~~~~~dg~v~i~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
++|+.||.+++|+-+.. .+..++...+......... ..........++|+|+|..+++++.++..+.|++...
T Consensus 203 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 277 (408)
T 4a11_B 203 ATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESA--NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNG 277 (408)
T ss_dssp EEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTS--SCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EEEcCCCcEEEEECCCCCcccccccccccccceeeccc--cccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCC
Confidence 99999999999543321 2222221111100000000 0000111112678999999999999999999998754
No 104
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.3e-20 Score=169.51 Aligned_cols=152 Identities=9% Similarity=-0.025 Sum_probs=121.2
Q ss_pred ceeeeecC-CCceEEEEEecCCeEEEecCCCccceeeEee-ccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 36 KVDITTNK-DMIEYKISYQESSRVKAFNPIQVATLILKTL-YGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 36 ~~~i~~~~-~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l-~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
...+...+ ..+.++++++.||+|++||+.... .+... ..|...|.+++|+|++. ++++|+.|+.|++||+.++.
T Consensus 128 v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~--~~~~~~~~~~~~i~~~~~~pdg~--~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS--QYIVHSAKSDVEYSSGVLHKDSL--LLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp EEEEECCC---CCEEEEEETTCCEEEEESSSSC--EEEEECCCSSCCCCEEEECTTSC--EEEEECTTSCEEEEESSCTT
T ss_pred EEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc--EEEEEecCCCCceEEEEECCCCC--EEEEEcCCCEEEEEECCCCC
Confidence 34555666 136799999999999999997533 34444 34566899999999877 89999999999999999998
Q ss_pred EE-EEecc-CCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEec---CCcce--EEEEEcCCCCEEEEEeC-C
Q psy4650 114 CV-QTLEG-HGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTY---GLERV--WTISSLKGSNNVAIGYD-E 185 (381)
Q Consensus 114 ~~-~~~~~-~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~---~~~~v--~~v~~~~~~~~l~~~~~-d 185 (381)
.. ..+.+ |.++|.+++|+|++.+|++++ |+.|++||++++.....+.. +...+ .+++|+|+|+++++++. |
T Consensus 204 ~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d 282 (343)
T 3lrv_A 204 QASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNES 282 (343)
T ss_dssp SCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTT
T ss_pred CCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCC
Confidence 77 78888 999999999999999999999 45999999998876554432 22333 46999999999999998 9
Q ss_pred CeEEEEe
Q psy4650 186 GSVLLKV 192 (381)
Q Consensus 186 g~v~i~~ 192 (381)
+.+++|.
T Consensus 283 ~~i~v~~ 289 (343)
T 3lrv_A 283 NSLTIYK 289 (343)
T ss_dssp TEEEEEE
T ss_pred CcEEEEE
Confidence 9999943
No 105
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.85 E-value=4.8e-20 Score=178.40 Aligned_cols=198 Identities=13% Similarity=0.110 Sum_probs=164.6
Q ss_pred ceeeeecC--CCceEEEEEecCCeEEEecCCCc------cceeeEeeccccccEEEEEeeeCCCccEEEEEcCC----Ce
Q psy4650 36 KVDITTNK--DMIEYKISYQESSRVKAFNPIQV------ATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADD----RL 103 (381)
Q Consensus 36 ~~~i~~~~--~~~~~~~s~~~d~~v~i~~~~~~------~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d----~~ 103 (381)
...+.+.+ + +.++++++.||+|++|++... ....+..+.+|...|.+++|+|++. ++++++.+ +.
T Consensus 67 v~~~~~sp~~~-~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~~~~~~~~ 143 (615)
T 1pgu_A 67 VTTVKFSPIKG-SQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGR--RLCVVGEGRDNFGV 143 (615)
T ss_dssp EEEEEECSSTT-CCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSS--EEEEEECCSSCSEE
T ss_pred EEEEEECcCCC-CCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCC--EEEEeccCCCCccE
Confidence 45666777 5 669999999999999998643 3466778889999999999999877 78888887 68
Q ss_pred EEEEECCCCeEEEEeccCCCCEEEEEEecCCC-EEEEEeCCCCEEEEeCCCCeeeEEEecCCc---ceEEEEEcCC-CCE
Q psy4650 104 VKIWDYQNKTCVQTLEGHGQNISAVCFHPELP-IVITGSEDGSVRVWHSGTHRLEISLTYGLE---RVWTISSLKG-SNN 178 (381)
Q Consensus 104 v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~---~v~~v~~~~~-~~~ 178 (381)
|.+|| .+..+..+.+|...|.+++|+|+++ .+++++.|+.|++||+.+++....+..|.. .|.+++|+|+ +.+
T Consensus 144 v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 221 (615)
T 1pgu_A 144 FISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEF 221 (615)
T ss_dssp EEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCE
T ss_pred EEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCE
Confidence 88888 5678889999999999999999998 899999999999999999999999999988 9999999999 999
Q ss_pred EEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCc--eeecccccCCccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 179 VAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSE--VQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 179 l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
+++++.||.+++ ||..++..+...... .+...+. .+.|+ ++..+++++.++....|++..
T Consensus 222 l~~~~~dg~i~v----------wd~~~~~~~~~~~~~~~~~~~~v~----~~~~~-~~~~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 222 VITVGSDRKISC----------FDGKSGEFLKYIEDDQEPVQGGIF----ALSWL-DSQKFATVGADATIRVWDVTT 283 (615)
T ss_dssp EEEEETTCCEEE----------EETTTCCEEEECCBTTBCCCSCEE----EEEES-SSSEEEEEETTSEEEEEETTT
T ss_pred EEEEeCCCeEEE----------EECCCCCEeEEecccccccCCceE----EEEEc-CCCEEEEEcCCCcEEEEECCC
Confidence 999999999999 777777666554110 1111111 14567 899999999999999999864
No 106
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1e-19 Score=164.36 Aligned_cols=182 Identities=19% Similarity=0.190 Sum_probs=146.6
Q ss_pred eeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEE
Q psy4650 69 LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRV 148 (381)
Q Consensus 69 ~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~v 148 (381)
.....+.+|.+.|.+++|+|++. +|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.++++++.|+.|++
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~--~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGD--LLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSC--EEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred cccEEEEEeeceEEEEEEcCCCC--EEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 34567889999999999999876 8999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCC-----CeEEEEecCCC---------------------------
Q psy4650 149 WHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDE-----GSVLLKVGREE--------------------------- 196 (381)
Q Consensus 149 wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d-----g~v~i~~~~~~--------------------------- 196 (381)
||+.+++.+..+. +...+.+++|+|++.++++++.+ |.+.+|+....
T Consensus 101 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 101 WDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp EETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred EECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 9999999988887 77899999999999999999998 99999862211
Q ss_pred ---------ceEEEecCCCEEEEEecC-ceeecccccCC---ccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 197 ---------PAVSMDVNGCKIIWARHS-EVQQANLKTMP---EVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 197 ---------~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
.++.-..++...+|+... ......+..+. ..+.|+|++..+++++.++....||+..
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence 111112223344555544 22222222221 1267899999999999999999999864
No 107
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.85 E-value=1.3e-19 Score=189.39 Aligned_cols=151 Identities=15% Similarity=0.179 Sum_probs=133.1
Q ss_pred eeeecCC-CceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 38 DITTNKD-MIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 38 ~i~~~~~-~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
.+.+.++ ...++++++.|++|++||+.. ...+..+.+|.+.|.+++|+|++. ++++|+.||+|++||+.++....
T Consensus 704 ~~~~~~~~~~~~l~sg~~d~~v~vwd~~~--~~~~~~~~~h~~~v~~~~~sp~~~--~l~s~s~dg~v~vwd~~~~~~~~ 779 (1249)
T 3sfz_A 704 CCHFTNKSNHLLLATGSNDFFLKLWDLNQ--KECRNTMFGHTNSVNHCRFSPDDE--LLASCSADGTLRLWDVRSANERK 779 (1249)
T ss_dssp EEEECSSSSCCEEEEEETTSCEEEEETTS--SSEEEEECCCSSCEEEEEECSSTT--EEEEEESSSEEEEEEGGGTEEEE
T ss_pred EEEEecCCCceEEEEEeCCCeEEEEECCC--cchhheecCCCCCEEEEEEecCCC--EEEEEECCCeEEEEeCCCCcccc
Confidence 4455553 456899999999999999974 456788899999999999999877 89999999999999987765433
Q ss_pred Ee-------------------------------------------------------ccCCCCEEEEEEecCCCEEEEEe
Q psy4650 117 TL-------------------------------------------------------EGHGQNISAVCFHPELPIVITGS 141 (381)
Q Consensus 117 ~~-------------------------------------------------------~~~~~~v~~~~~~p~~~~l~s~~ 141 (381)
.+ .+|...|.+++|+|++..+++++
T Consensus 780 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 859 (1249)
T 3sfz_A 780 SINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIAL 859 (1249)
T ss_dssp EEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEEC
T ss_pred eecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEe
Confidence 22 16778899999999999999999
Q ss_pred CCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy4650 142 EDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192 (381)
Q Consensus 142 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~ 192 (381)
.|+.|++||+.++.....+.+|...|.+++|+|+|..+++++.||.+++|+
T Consensus 860 ~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 860 SQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp SSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 999999999999999999999999999999999999999999999999997
No 108
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.84 E-value=1.3e-19 Score=168.75 Aligned_cols=137 Identities=26% Similarity=0.396 Sum_probs=125.3
Q ss_pred ceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCE
Q psy4650 46 IEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNI 125 (381)
Q Consensus 46 ~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v 125 (381)
+.++++|+.||+|++||+.. ...+..+.+|.+.|.++.|++ . ++++|+.||+|++||+.+++.+..+.+|...|
T Consensus 129 g~~l~sg~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~~--~--~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v 202 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVT--GKCLRTLVGHTGGVWSSQMRD--N--IIISGSTDRTLKVWNAETGECIHTLYGHTSTV 202 (445)
T ss_dssp TTEEEEEETTSCEEEEETTT--CCEEEECCCCSSCEEEEEEET--T--EEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCEEEEEECCCcEEEEECCC--CcEEEEEcCCCCCEEEEEecC--C--EEEEEeCCCeEEEEECCcCcEEEEECCCCCcE
Confidence 45899999999999999874 456788999999999999973 3 89999999999999999999999999999999
Q ss_pred EEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy4650 126 SAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192 (381)
Q Consensus 126 ~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~ 192 (381)
.+++|+ +..+++|+.|+.|++||+.+++.+..+.+|...+.++.+ ++..+++|+.||.+++|+
T Consensus 203 ~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd 265 (445)
T 2ovr_B 203 RCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 265 (445)
T ss_dssp EEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEE
T ss_pred EEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEE
Confidence 999996 567999999999999999999999999999999999999 678999999999999954
No 109
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.84 E-value=1.7e-19 Score=168.11 Aligned_cols=189 Identities=22% Similarity=0.280 Sum_probs=153.1
Q ss_pred ceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCE
Q psy4650 46 IEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNI 125 (381)
Q Consensus 46 ~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v 125 (381)
+.++++++.||.|++||+.. ...+..+.+|.+.|.++.| ++. ++++|+.|+.|++||+.+++.+..+.+|...+
T Consensus 249 ~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~~~~~v~~~~~--~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v 322 (445)
T 2ovr_B 249 GRRVVSGAYDFMVKVWDPET--ETCLHTLQGHTNRVYSLQF--DGI--HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 322 (445)
T ss_dssp SSCEEEEETTSCEEEEEGGG--TEEEEEECCCSSCEEEEEE--CSS--EEEEEETTSCEEEEETTTCCEEEEECCCCSCE
T ss_pred CCEEEEEcCCCEEEEEECCC--CcEeEEecCCCCceEEEEE--CCC--EEEEEeCCCeEEEEECCCCCEEEEEcCCcccE
Confidence 45789999999999999863 5667888999999999999 444 79999999999999999999999999999999
Q ss_pred EEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEec---CCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEe
Q psy4650 126 SAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTY---GLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMD 202 (381)
Q Consensus 126 ~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~---~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d 202 (381)
.++.++ +..+++|+.||.|++||+.+++.+..+.. |...|.+++|+ +.++++|+.||.+++ ||
T Consensus 323 ~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~i----------wd 388 (445)
T 2ovr_B 323 SGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKL----------WD 388 (445)
T ss_dssp EEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEE----------EE
T ss_pred EEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEE----------EE
Confidence 988774 66999999999999999999999999886 78889999996 579999999999999 77
Q ss_pred cCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHH----HhccCCCcCh
Q psy4650 203 VNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTI----KYRLDISDSH 255 (381)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~----~~~~d~~~~~ 255 (381)
..++..+........ ....+....++|+|+|..+++++.++. ...||+..++
T Consensus 389 ~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~~ 444 (445)
T 2ovr_B 389 LKTGEFIRNLVTLES-GGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 444 (445)
T ss_dssp TTTCCEEEEEEECTT-GGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCCC
T ss_pred CCCCceeeeeecccc-CCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCCC
Confidence 777776655421100 011111122578899999999999886 6677776543
No 110
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.3e-20 Score=175.27 Aligned_cols=192 Identities=12% Similarity=0.126 Sum_probs=138.3
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCc-----------------------------cceeeEeeccccccEEEE
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQV-----------------------------ATLILKTLYGHEKGVNCV 84 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~-----------------------------~~~~~~~l~~h~~~v~~~ 84 (381)
.....+...+| +.++++++.|++|+ ++... ....+.++ +|.+.|.++
T Consensus 16 ~~v~sv~~SpD-G~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~-~~~~~V~~v 91 (588)
T 2j04_A 16 DWKNNLTWARD-GTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNS-QPVCYPRVC 91 (588)
T ss_dssp SSSCCEEECTT-SCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTT-SCSCCEEEE
T ss_pred ccEEEEEECCC-CCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeec-CCCCcEEEE
Confidence 45667888887 66899999999995 33211 11111111 467889999
Q ss_pred EeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCC-----CEEEEEEecCCCEEEEEeCCCCEEEEeCCCCe----
Q psy4650 85 DYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQ-----NISAVCFHPELPIVITGSEDGSVRVWHSGTHR---- 155 (381)
Q Consensus 85 ~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~-----~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~---- 155 (381)
+|+|+|. .||+++.||.|++||..+ ++..+. |.. .|.+++|+|+|++|++|+.||+|++||+.++.
T Consensus 92 awSPdG~--~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~ 166 (588)
T 2j04_A 92 KPSPIDD--WMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTP 166 (588)
T ss_dssp EECSSSS--CEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCC
T ss_pred EECCCCC--EEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccc
Confidence 9999888 799999999999999654 666667 665 49999999999999999999999999999885
Q ss_pred ---eeEEE----ecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEE--EE-ecCceeecccccCC
Q psy4650 156 ---LEISL----TYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKII--WA-RHSEVQQANLKTMP 225 (381)
Q Consensus 156 ---~~~~~----~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~--~~-~~~~~~~~~~~~~~ 225 (381)
.+.++ .+|...|.+++|+|+| +++++.|+.+++ ||..++... +. +.. .+...+.+
T Consensus 167 ~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrl----------Wd~~~~~~~~~~~tL~~-~h~~~V~s-- 231 (588)
T 2j04_A 167 EFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFS----------MTVSASSHQPVSRMIQN-ASRRKITD-- 231 (588)
T ss_dssp CCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEE----------ECCCSSSSCCCEEEEEC-CCSSCCCC--
T ss_pred cceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEE----------EECCCCccccceeeecc-cccCcEEE--
Confidence 35666 5577899999999999 888999999999 555444410 11 100 01111111
Q ss_pred ccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 226 EVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 226 ~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
++|+ |..+++++ ++.++.|++...
T Consensus 232 --vaFs--g~~LASa~-~~tIkLWd~~~~ 255 (588)
T 2j04_A 232 --LKIV--DYKVVLTC-PGYVHKIDLKNY 255 (588)
T ss_dssp --EEEE--TTEEEEEC-SSEEEEEETTTT
T ss_pred --EEEE--CCEEEEEe-CCeEEEEECCCC
Confidence 4455 46777766 477888887643
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.84 E-value=1.5e-19 Score=168.00 Aligned_cols=180 Identities=16% Similarity=0.240 Sum_probs=146.2
Q ss_pred ceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCE
Q psy4650 46 IEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNI 125 (381)
Q Consensus 46 ~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v 125 (381)
+.++++|+.||+|++||... ......+.+|.+.|.++.| ++. ++++|+.||+|++||+.+++.+..+.+|...|
T Consensus 143 ~~~l~~g~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~l~~--~~~--~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v 216 (435)
T 1p22_A 143 DQKIVSGLRDNTIKIWDKNT--LECKRILTGHTGSVLCLQY--DER--VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV 216 (435)
T ss_dssp SSEEEEEESSSCEEEEESSS--CCEEEEECCCSSCEEEEEC--CSS--EEEEEETTSCEEEEESSSCCEEEEECCCCSCE
T ss_pred CCEEEEEeCCCeEEEEeCCC--CeEEEEEcCCCCcEEEEEE--CCC--EEEEEcCCCeEEEEECCCCcEEEEEcCCCCcE
Confidence 56899999999999999864 4567889999999999999 444 89999999999999999999999999999999
Q ss_pred EEEEEecCCCEEEEEeCCCCEEEEeCCCCeee---EEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEe
Q psy4650 126 SAVCFHPELPIVITGSEDGSVRVWHSGTHRLE---ISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMD 202 (381)
Q Consensus 126 ~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~---~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d 202 (381)
.+++|++ ..+++|+.|+.|++||+.++... ..+.+|...|.++.| ++.++++|+.||.+++ ||
T Consensus 217 ~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~v----------wd 282 (435)
T 1p22_A 217 LHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV----------WN 282 (435)
T ss_dssp EEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEE----------EE
T ss_pred EEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEE----------EE
Confidence 9999974 59999999999999999987765 667789999999999 6789999999999999 66
Q ss_pred cCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 203 VNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
..++..+.....+.. .+.. ...++..+++++.++..+.||+..
T Consensus 283 ~~~~~~~~~~~~~~~--~v~~------~~~~~~~l~~g~~dg~i~iwd~~~ 325 (435)
T 1p22_A 283 TSTCEFVRTLNGHKR--GIAC------LQYRDRLVVSGSSDNTIRLWDIEC 325 (435)
T ss_dssp TTTCCEEEEEECCSS--CEEE------EEEETTEEEEEETTSCEEEEETTT
T ss_pred CCcCcEEEEEcCCCC--cEEE------EEeCCCEEEEEeCCCeEEEEECCC
Confidence 666655544432211 1111 112566777888887788887754
No 112
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.84 E-value=1.6e-19 Score=163.05 Aligned_cols=126 Identities=17% Similarity=0.247 Sum_probs=111.1
Q ss_pred ceeeEeeccccccEEEEEeeeCC-CccEEEEEcCCCeEEEEECCC-CeEE-EEeccCCCCEEEEEEecCCCEEEEEeCCC
Q psy4650 68 TLILKTLYGHEKGVNCVDYYHGG-DKPYLISGADDRLVKIWDYQN-KTCV-QTLEGHGQNISAVCFHPELPIVITGSEDG 144 (381)
Q Consensus 68 ~~~~~~l~~h~~~v~~~~~~~~~-~~~~l~s~~~d~~v~vwd~~~-~~~~-~~~~~~~~~v~~~~~~p~~~~l~s~~~d~ 144 (381)
...+..+.+|.+.|.+++|+|++ ...+|++|+.||.|++||+.+ +... ..+.+|...|.+++|+|++.++++++.|+
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC
Confidence 44567789999999999999974 013899999999999999987 5444 77889999999999999999999999999
Q ss_pred CEEEEeCCCCeeeEEEecCCcceEEEEE--cCCCCEEEEEeCCCeEEEEecC
Q psy4650 145 SVRVWHSGTHRLEISLTYGLERVWTISS--LKGSNNVAIGYDEGSVLLKVGR 194 (381)
Q Consensus 145 ~i~vwd~~~~~~~~~~~~~~~~v~~v~~--~~~~~~l~~~~~dg~v~i~~~~ 194 (381)
.|++||+.+++... +..|...|.+++| +|++.++++++.||.+++|+..
T Consensus 109 ~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 159 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR 159 (368)
T ss_dssp EEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS
T ss_pred cEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC
Confidence 99999999998766 5568899999999 8999999999999999999843
No 113
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.84 E-value=1.1e-19 Score=175.91 Aligned_cols=202 Identities=13% Similarity=0.081 Sum_probs=162.8
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCcc--ceeeEeecccccc-EEEEEeee--CCCccEEEEEcCCCeEEEEE
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVA--TLILKTLYGHEKG-VNCVDYYH--GGDKPYLISGADDRLVKIWD 108 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~--~~~~~~l~~h~~~-v~~~~~~~--~~~~~~l~s~~~d~~v~vwd 108 (381)
.....+...+++ .++++++ ++.+++|++.... ......+.+|.+. |.+++|+| ++. +|++|+.||+|++||
T Consensus 19 ~~v~~~~~spdg-~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~--~l~s~~~dg~v~vw~ 94 (615)
T 1pgu_A 19 NFTTHLSYDPTT-NAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ--YLCSGDESGKVIVWG 94 (615)
T ss_dssp TCCCCCEEETTT-TEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCC--EEEEEETTSEEEEEE
T ss_pred CceeEEEECCCC-CEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCC--EEEEecCCCEEEEEe
Confidence 334566677764 4666666 7899999997420 0567889999999 99999999 877 899999999999999
Q ss_pred CCCC--------eEEEEeccCCCCEEEEEEecCCCEEEEEeCC----CCEEEEeCCCCeeeEEEecCCcceEEEEEcCCC
Q psy4650 109 YQNK--------TCVQTLEGHGQNISAVCFHPELPIVITGSED----GSVRVWHSGTHRLEISLTYGLERVWTISSLKGS 176 (381)
Q Consensus 109 ~~~~--------~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d----~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~ 176 (381)
+.++ .....+..|..+|.+++|+|++..+++++.+ +.|++|| .++....+.+|...|.+++|+|++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~ 172 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSR 172 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSS
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCC
Confidence 9754 6677888899999999999999999999987 6888888 677888889999999999999999
Q ss_pred C-EEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCC-ceEEeeehHHHHHhccCCCcC
Q psy4650 177 N-NVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITA-GVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 177 ~-~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-g~~l~~~~~d~~~~~~d~~~~ 254 (381)
. .+++++.||.+++ ||..++..+.....+.... ... ..++|+|+ |..+++++.++..+.|++...
T Consensus 173 ~~~l~~~~~d~~v~v----------wd~~~~~~~~~~~~~~~~~--~~v-~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 239 (615)
T 1pgu_A 173 PMRSMTVGDDGSVVF----------YQGPPFKFSASDRTHHKQG--SFV-RDVEFSPDSGEFVITVGSDRKISCFDGKSG 239 (615)
T ss_dssp SCEEEEEETTTEEEE----------EETTTBEEEEEECSSSCTT--CCE-EEEEECSTTCCEEEEEETTCCEEEEETTTC
T ss_pred CcEEEEEeCCCcEEE----------EeCCCcceeeeecccCCCC--ceE-EEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence 8 8999999999999 7777777766554322100 011 11578899 999999999999999997643
No 114
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.83 E-value=4.2e-20 Score=165.54 Aligned_cols=199 Identities=12% Similarity=0.031 Sum_probs=152.8
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCcc-ceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEEC-CCC
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVA-TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDY-QNK 112 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~-~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~-~~~ 112 (381)
....+.+.++ +.++++++.|+.|++|++.... ......+.+|...|.+++|+|++.. +|++|+.||.|++||+ .++
T Consensus 13 ~v~~~~~s~~-~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 13 YISDIKIIPS-KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDL-QIYVGTVQGEILKVDLIGSP 90 (342)
T ss_dssp CEEEEEEEGG-GTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSE-EEEEEETTSCEEEECSSSSS
T ss_pred cEEEEEEcCC-CCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCc-EEEEEcCCCeEEEEEeccCC
Confidence 3456666665 5689999999999999986533 1234566699999999999997531 6999999999999999 877
Q ss_pred eEEEEecc--CCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCC---------CeeeEEEecCCcceEEEEEcCCCCEEEE
Q psy4650 113 TCVQTLEG--HGQNISAVCFHPELPIVITGSEDGSVRVWHSGT---------HRLEISLTYGLERVWTISSLKGSNNVAI 181 (381)
Q Consensus 113 ~~~~~~~~--~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~---------~~~~~~~~~~~~~v~~v~~~~~~~~l~~ 181 (381)
.. ..+.+ |...|.+++|+| +..+++++.|+.|++||+++ ++.+..+. +...+.+++|+|++ +++
T Consensus 91 ~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~ 165 (342)
T 1yfq_A 91 SF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIV 165 (342)
T ss_dssp SE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEE
T ss_pred ce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEE
Confidence 64 77888 999999999999 99999999999999999987 66666666 78899999999987 999
Q ss_pred EeCCCeEEEEecCCCceEEEecCC-CEEEEEecCceeecccccCCccccccC-CceEEeeehHHHHHhccCCCcC
Q psy4650 182 GYDEGSVLLKVGREEPAVSMDVNG-CKIIWARHSEVQQANLKTMPEVFENIT-AGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 182 ~~~dg~v~i~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
++.||.+++ ||..+ +......... ........+.++| ++..+++++.++....|++...
T Consensus 166 ~~~d~~i~i----------~d~~~~~~~~~~~~~~----~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 166 GMNNSQVQW----------FRLPLCEDDNGTIEES----GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp EESTTEEEE----------EESSCCTTCCCEEEEC----SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred EeCCCeEEE----------EECCccccccceeeec----CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 999999999 55544 2111000000 0011111257789 9999999999998888887543
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.1e-18 Score=162.97 Aligned_cols=153 Identities=18% Similarity=0.190 Sum_probs=130.9
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccce--eeEeeccccccEEEEEeeeC---CCccEEEEEcCCCeEEEEECC
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATL--ILKTLYGHEKGVNCVDYYHG---GDKPYLISGADDRLVKIWDYQ 110 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~--~~~~l~~h~~~v~~~~~~~~---~~~~~l~s~~~d~~v~vwd~~ 110 (381)
...+.+.++ +.++++++.+|.+++|++...... ....+.+|.+.|.+++|+|+ +. +|++|+.|++|++||+.
T Consensus 152 v~~~~~sp~-~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~--~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 152 PNAISIAED-DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ--FIITSDRDEHIKISHYP 228 (450)
T ss_dssp EEEEEECTT-SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE--EEEEEETTSCEEEEEES
T ss_pred ceEEEEcCC-CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc--EEEEEcCCCcEEEEECC
Confidence 356667776 568899999999999998653322 34477899999999999998 54 89999999999999999
Q ss_pred CCeEEEE-eccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEec-------------------------CC
Q psy4650 111 NKTCVQT-LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTY-------------------------GL 164 (381)
Q Consensus 111 ~~~~~~~-~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-------------------------~~ 164 (381)
++..+.. +.+|.+.|.+++|+ ++.++++|+.|+.|++||+.+++.+..+.. ..
T Consensus 229 ~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (450)
T 2vdu_B 229 QCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIE 307 (450)
T ss_dssp CTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBC
T ss_pred CCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccce
Confidence 9887777 56899999999999 999999999999999999999998888763 23
Q ss_pred cceEEEEEcCCCCEEEEEe-CCCeEEEEe
Q psy4650 165 ERVWTISSLKGSNNVAIGY-DEGSVLLKV 192 (381)
Q Consensus 165 ~~v~~v~~~~~~~~l~~~~-~dg~v~i~~ 192 (381)
..+.+++|+|+++++++++ .++.+++|.
T Consensus 308 ~~v~~i~~~~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 308 FAVSKIIKSKNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp CCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred EEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 5689999999999999999 899999944
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.83 E-value=3.6e-19 Score=165.34 Aligned_cols=179 Identities=16% Similarity=0.244 Sum_probs=150.5
Q ss_pred ceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE---EEeccCC
Q psy4650 46 IEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV---QTLEGHG 122 (381)
Q Consensus 46 ~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~---~~~~~~~ 122 (381)
+.++++|+.||+|++||+.. ...+..+.+|.+.|.++.|++ . .+++|+.|++|++||+.++... ..+.+|.
T Consensus 183 ~~~l~sg~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~l~~~~--~--~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~ 256 (435)
T 1p22_A 183 ERVIITGSSDSTVRVWDVNT--GEMLNTLIHHCEAVLHLRFNN--G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 256 (435)
T ss_dssp SSEEEEEETTSCEEEEESSS--CCEEEEECCCCSCEEEEECCT--T--EEEEEETTSCEEEEECSSSSCCEEEEEECCCS
T ss_pred CCEEEEEcCCCeEEEEECCC--CcEEEEEcCCCCcEEEEEEcC--C--EEEEeeCCCcEEEEeCCCCCCceeeeEecCCC
Confidence 56899999999999999974 456788999999999999964 3 7999999999999999887644 6778999
Q ss_pred CCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEe
Q psy4650 123 QNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMD 202 (381)
Q Consensus 123 ~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d 202 (381)
..|.+++| ++..+++|+.|+.|++||+.+++.+..+.+|...+.++.++ +..+++|+.||.+++ ||
T Consensus 257 ~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~i----------wd 322 (435)
T 1p22_A 257 AAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRL----------WD 322 (435)
T ss_dssp SCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEE----------EE
T ss_pred CcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEE----------EE
Confidence 99999999 67899999999999999999999999999999999999994 679999999999999 77
Q ss_pred cCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCC
Q psy4650 203 VNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~ 252 (381)
..++..+.....+.. .+.. +.+ ++..+++++.++....||+.
T Consensus 323 ~~~~~~~~~~~~h~~--~v~~----~~~--~~~~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 323 IECGACLRVLEGHEE--LVRC----IRF--DNKRIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp TTTCCEEEEECCCSS--CEEE----EEC--CSSEEEEEETTSCEEEEEHH
T ss_pred CCCCCEEEEEeCCcC--cEEE----EEe--cCCEEEEEeCCCcEEEEECC
Confidence 777776655543211 1111 122 78899999999999999874
No 117
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.83 E-value=9.6e-20 Score=163.20 Aligned_cols=199 Identities=12% Similarity=0.038 Sum_probs=151.6
Q ss_pred ceeeeecCCCce-EEEEEecCCeEEEecC-CCccceeeEeecc--ccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCC
Q psy4650 36 KVDITTNKDMIE-YKISYQESSRVKAFNP-IQVATLILKTLYG--HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 111 (381)
Q Consensus 36 ~~~i~~~~~~~~-~~~s~~~d~~v~i~~~-~~~~~~~~~~l~~--h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~ 111 (381)
...+.+.++ +. ++++++.||.|++|++ ... ....+.+ |...|.+++|+| +. ++++++.|+.|++||+.+
T Consensus 59 v~~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~~---~~~~~~~~~~~~~v~~l~~~~-~~--~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 59 LLCCNFIDN-TDLQIYVGTVQGEILKVDLIGSP---SFQALTNNEANLGICRICKYG-DD--KLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp EEEEEEEES-SSEEEEEEETTSCEEEECSSSSS---SEEECBSCCCCSCEEEEEEET-TT--EEEEEETTSEEEEECHHH
T ss_pred eEEEEECCC-CCcEEEEEcCCCeEEEEEeccCC---ceEeccccCCCCceEEEEeCC-CC--EEEEEcCCCeEEEEcccc
Confidence 345556665 66 8999999999999998 643 2367788 999999999999 55 899999999999999987
Q ss_pred ---------CeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCC-Cee--eEEEecCCcceEEEEEcC-CCCE
Q psy4650 112 ---------KTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGT-HRL--EISLTYGLERVWTISSLK-GSNN 178 (381)
Q Consensus 112 ---------~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~-~~~--~~~~~~~~~~v~~v~~~~-~~~~ 178 (381)
++++..+. |...|.+++|+|++ +++++.|+.|++||+++ +.. ......+...+.+++|+| ++.+
T Consensus 132 ~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 208 (342)
T 1yfq_A 132 YGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEG 208 (342)
T ss_dssp HTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCE
T ss_pred cccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCE
Confidence 66666666 88999999999987 99999999999999998 543 334455778999999999 9999
Q ss_pred EEEEeCCCeEEEEecCCCceEEEecCCC------EEEEEecCceeecc---cccCCccccccCCceEEeeehHHHHHhcc
Q psy4650 179 VAIGYDEGSVLLKVGREEPAVSMDVNGC------KIIWARHSEVQQAN---LKTMPEVFENITAGVVLTLSVHVTIKYRL 249 (381)
Q Consensus 179 l~~~~~dg~v~i~~~~~~~~~~~d~~~~------~~~~~~~~~~~~~~---~~~~~~~~~~~~dg~~l~~~~~d~~~~~~ 249 (381)
+++++.||.+++|. .+.. ........+..... .......++|+|++..+++++.++..+.|
T Consensus 209 l~~~~~dg~i~i~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vw 278 (342)
T 1yfq_A 209 YACSSIDGRVAVEF----------FDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW 278 (342)
T ss_dssp EEEEETTSEEEEEE----------CCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEE
T ss_pred EEEEecCCcEEEEE----------EcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEE
Confidence 99999999999955 3222 22222211111000 00011125788999999999999999999
Q ss_pred CCCcC
Q psy4650 250 DISDS 254 (381)
Q Consensus 250 d~~~~ 254 (381)
++...
T Consensus 279 d~~~~ 283 (342)
T 1yfq_A 279 NLQTR 283 (342)
T ss_dssp ETTTT
T ss_pred cCccH
Confidence 98643
No 118
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.82 E-value=3e-19 Score=178.74 Aligned_cols=166 Identities=15% Similarity=0.162 Sum_probs=142.5
Q ss_pred eeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEE
Q psy4650 70 ILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149 (381)
Q Consensus 70 ~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vw 149 (381)
..+.+.+|.+.|.+++|+|++. ++++|+.||.|++||+.++..+..+.+|.++|.+++|+|++..+++|+.||.|++|
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~--~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEP--WVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSS--EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred cceeeecCCCceEEEEECCCCC--EEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 4577889999999999999876 89999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCC-EEEEEecCceeecccccCCccc
Q psy4650 150 HSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGC-KIIWARHSEVQQANLKTMPEVF 228 (381)
Q Consensus 150 d~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~ 228 (381)
|+.+++....+.+|...|.+++|+|+++++++++.||.+++ ||..++ ........+. .....+
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v----------w~~~~~~~~~~~~~~~~------~~v~~~ 146 (814)
T 3mkq_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKL----------WNWENNWALEQTFEGHE------HFVMCV 146 (814)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEE----------EEGGGTSEEEEEEECCS------SCEEEE
T ss_pred ECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEE----------EECCCCceEEEEEcCCC------CcEEEE
Confidence 99999999999999999999999999999999999999999 555444 3222222111 001115
Q ss_pred cccC-CceEEeeehHHHHHhccCCCc
Q psy4650 229 ENIT-AGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 229 ~~~~-dg~~l~~~~~d~~~~~~d~~~ 253 (381)
.|+| ++..+++++.++....|++..
T Consensus 147 ~~~p~~~~~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETTC
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 6788 899999999999999998754
No 119
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.81 E-value=6.7e-18 Score=156.09 Aligned_cols=152 Identities=18% Similarity=0.289 Sum_probs=129.5
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCcc--ceeeEeeccccccEEEEEeeeCCCccEEEE--EcCCCeEEEEECCCC
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVA--TLILKTLYGHEKGVNCVDYYHGGDKPYLIS--GADDRLVKIWDYQNK 112 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~--~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s--~~~d~~v~vwd~~~~ 112 (381)
+.+...++ +.++++++.|+.+++|+..... ...+....+|.+.|.+++|+|.+.. ++++ |+.|++|++||+.++
T Consensus 234 ~~~~~~~~-g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~-~la~~~gs~D~~I~iwd~~t~ 311 (420)
T 4gga_A 234 CGLRWAPD-GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSN-VLATGGGTSDRHIRIWNVCSG 311 (420)
T ss_dssp EEEEECTT-SSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTT-EEEEEECTTTCEEEEEETTTT
T ss_pred eeeeecCC-CCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCccc-EEEEEeecCCCEEEEEeCCcc
Confidence 33444444 5689999999999999986432 2346677899999999999997764 5554 568999999999999
Q ss_pred eEEEEeccCCCCEEEEEEecCCCEEEEEe--CCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 113 TCVQTLEGHGQNISAVCFHPELPIVITGS--EDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 113 ~~~~~~~~~~~~v~~~~~~p~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
.+...+..| ..+.++.|+|++..+++++ .|+.|++||+.+++.+..+.+|.+.|++++|+|+|.+|++|+.||+|++
T Consensus 312 ~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvri 390 (420)
T 4gga_A 312 ACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRL 390 (420)
T ss_dssp EEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEE
T ss_pred ccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEE
Confidence 998888755 5789999999999877664 6999999999999999999999999999999999999999999999999
Q ss_pred E
Q psy4650 191 K 191 (381)
Q Consensus 191 ~ 191 (381)
|
T Consensus 391 W 391 (420)
T 4gga_A 391 W 391 (420)
T ss_dssp E
T ss_pred E
Confidence 4
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.80 E-value=1.6e-18 Score=156.66 Aligned_cols=199 Identities=13% Similarity=0.139 Sum_probs=146.6
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
....++.+++++ .++++|+.+ .+++|+.... ..... .+...+..+.+.++++. .+++++.|++|++||..+++
T Consensus 20 ~~V~~v~fs~dg-~~la~g~~~-~~~iw~~~~~--~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~d~~v~iWd~~~~~ 92 (355)
T 3vu4_A 20 NPVTDYEFNQDQ-SCLILSTLK-SFEIYNVHPV--AHIMS--QEMRHLSKVRMLHRTNY-VAFVTGVKEVVHIWDDVKKQ 92 (355)
T ss_dssp CCCCEEEECTTS-SEEEEECSS-EEEEEEETTE--EEEEE--EECSCCCEEEECTTSSE-EEEECSSTTEEEEEETTTTE
T ss_pred CceEEEEECCCC-CEEEEEcCC-EEEEEecCCc--ceeee--eecCCeEEEEEcCCCCE-EEEEECCccEEEEEECCCCc
Confidence 344577788874 578887766 5789997642 22222 22235777888876662 34678889999999999999
Q ss_pred EEEEeccCCCCEEEEEEecCC-----------------------------------CEEEE--EeCCCCEEEEeCCCCe-
Q psy4650 114 CVQTLEGHGQNISAVCFHPEL-----------------------------------PIVIT--GSEDGSVRVWHSGTHR- 155 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~~-----------------------------------~~l~s--~~~d~~i~vwd~~~~~- 155 (381)
.+..+. |...|.+++|+++. ..++. |+.||.|++||+.++.
T Consensus 93 ~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~ 171 (355)
T 3vu4_A 93 DVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGS 171 (355)
T ss_dssp EEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC---
T ss_pred EEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCc
Confidence 888887 66688888887653 23333 5679999999998765
Q ss_pred ---------------eeEEEecCCcceEEEEEcCCCCEEEEEeCCCe-EEEEecCCCceEEEecCCCEEEEEecCceeec
Q psy4650 156 ---------------LEISLTYGLERVWTISSLKGSNNVAIGYDEGS-VLLKVGREEPAVSMDVNGCKIIWARHSEVQQA 219 (381)
Q Consensus 156 ---------------~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~-v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 219 (381)
....+.+|...|.+++|+|+|.+|++|+.||. +++ ||..++..+.......+..
T Consensus 172 ~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~i----------wd~~~~~~~~~~~~g~h~~ 241 (355)
T 3vu4_A 172 ATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRV----------FKTEDGVLVREFRRGLDRA 241 (355)
T ss_dssp ---------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEE----------EETTTCCEEEEEECTTCCS
T ss_pred cccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEE----------EECCCCcEEEEEEcCCCCC
Confidence 26778899999999999999999999999998 999 7887777666554210111
Q ss_pred ccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 220 NLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 220 ~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
.+ ..++|+|||.++++++.++..+.|++...
T Consensus 242 ~v----~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 242 DV----VDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp CE----EEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred cE----EEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 11 12578999999999999999999998654
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.80 E-value=5.2e-19 Score=162.07 Aligned_cols=211 Identities=9% Similarity=0.044 Sum_probs=138.4
Q ss_pred hcceeeeec---CCCceEEEEEecCCeEEEecCCCccc-----eeeE--eeccccccEEEEEeeeCC-------------
Q psy4650 34 ETKVDITTN---KDMIEYKISYQESSRVKAFNPIQVAT-----LILK--TLYGHEKGVNCVDYYHGG------------- 90 (381)
Q Consensus 34 ~~~~~i~~~---~~~~~~~~s~~~d~~v~i~~~~~~~~-----~~~~--~l~~h~~~v~~~~~~~~~------------- 90 (381)
..||.+... +.... +++++.++.|++|++..... .... ....|...+..+.|++..
T Consensus 16 ~~p~~~~w~~~~~~~~~-l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (393)
T 4gq1_A 16 VRPYTTTWCSQSPSCSN-LLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNV 94 (393)
T ss_dssp CCEEEEEECTTSGGGTT-EEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC--------
T ss_pred CCCeEEEEeCCCCCCCC-EEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcce
Confidence 456666653 23233 45556688899997632110 0001 111233444444443210
Q ss_pred -----CccEEEEEcCCCeEEEEECCCCeEE-----EEeccCCCCEEEEEEec--------CCCEEEEEeCCCCEEEEeCC
Q psy4650 91 -----DKPYLISGADDRLVKIWDYQNKTCV-----QTLEGHGQNISAVCFHP--------ELPIVITGSEDGSVRVWHSG 152 (381)
Q Consensus 91 -----~~~~l~s~~~d~~v~vwd~~~~~~~-----~~~~~~~~~v~~~~~~p--------~~~~l~s~~~d~~i~vwd~~ 152 (381)
...++++|+.|++|++||..++... ..+.+|.+.|.+++|+| ++.+|++|+.|++|+|||+.
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 1237999999999999999988543 34688999999999998 78899999999999999999
Q ss_pred CCeeeEEEecCCcceEEEEEcCCCC-EEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCc----------------
Q psy4650 153 THRLEISLTYGLERVWTISSLKGSN-NVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSE---------------- 215 (381)
Q Consensus 153 ~~~~~~~~~~~~~~v~~v~~~~~~~-~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~---------------- 215 (381)
++.....+..|...+.+++|+|++. ++++|+.||.+++| |..++.........
T Consensus 175 ~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~w----------d~~t~~~~~~~~~~~~~~~~~~~s~~~~~~ 244 (393)
T 4gq1_A 175 DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIF----------DWTLNLSAEENSQTELVKNPWLLTLNTLPL 244 (393)
T ss_dssp TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEE----------ETTCCC----------CSCCCSEEEESGGG
T ss_pred CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEE----------ECCCCcccccccccCCcccceEEecccccc
Confidence 9988888888999999999999874 79999999999995 44443322211100
Q ss_pred eeecccccCCc---cccc-cCCceEEeeehHHHHHhccCCCcCh
Q psy4650 216 VQQANLKTMPE---VFEN-ITAGVVLTLSVHVTIKYRLDISDSH 255 (381)
Q Consensus 216 ~~~~~~~~~~~---~~~~-~~dg~~l~~~~~d~~~~~~d~~~~~ 255 (381)
.......++.. .+.| .+||..++.+..++....|++...+
T Consensus 245 ~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 245 VNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp C------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----
T ss_pred eeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC
Confidence 00000111111 1233 3899999999999999999986543
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.79 E-value=2.6e-17 Score=150.38 Aligned_cols=185 Identities=11% Similarity=0.098 Sum_probs=147.1
Q ss_pred eEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEE
Q psy4650 47 EYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNIS 126 (381)
Q Consensus 47 ~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~ 126 (381)
.++++++.++.|++||+.. ...+..+.+|. .+.+++|+|++.. ++++++.|++|++||..+++.+..+..+. .+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~--~~~~~~~~~~~-~~~~~~~s~dg~~-l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~ 77 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTS--NKVTATIPVGS-NPMGAVISPDGTK-VYVANAHSNDVSIIDTATNNVIATVPAGS-SPQ 77 (391)
T ss_dssp EEEEEETTTTEEEEEETTT--TEEEEEEECSS-SEEEEEECTTSSE-EEEEEGGGTEEEEEETTTTEEEEEEECSS-SEE
T ss_pred EEEEEcCCCCEEEEEECCC--CeEEEEeecCC-CcceEEECCCCCE-EEEECCCCCeEEEEECCCCeEEEEEECCC-Ccc
Confidence 4678899999999999974 45666777665 5899999998872 44788899999999999999988887655 899
Q ss_pred EEEEecCCCEEEE-EeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEE-EEEeCCCeEEEEecCCCceEEEecC
Q psy4650 127 AVCFHPELPIVIT-GSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNV-AIGYDEGSVLLKVGREEPAVSMDVN 204 (381)
Q Consensus 127 ~~~~~p~~~~l~s-~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l-~~~~~dg~v~i~~~~~~~~~~~d~~ 204 (381)
+++|+|+++.++. ++.++.|++||+.+++.+..+..+ ..+.+++|+|+++.+ ++++.++.+++ ||..
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~----------~d~~ 146 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSV----------INTV 146 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEE----------EETT
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEE----------EECC
Confidence 9999999997754 456799999999999988887754 578999999999977 67778999998 8887
Q ss_pred CCEEEEEecCceeecccccCCccccccCCceEE-eeehHHHHHhccCCCcC
Q psy4650 205 GCKIIWARHSEVQQANLKTMPEVFENITAGVVL-TLSVHVTIKYRLDISDS 254 (381)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l-~~~~~d~~~~~~d~~~~ 254 (381)
++..+.....+.. ...+.++|+|..+ +.+..++..+.||+...
T Consensus 147 ~~~~~~~~~~~~~-------~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~ 190 (391)
T 1l0q_A 147 TKAVINTVSVGRS-------PKGIAVTPDGTKVYVANFDSMSISVIDTVTN 190 (391)
T ss_dssp TTEEEEEEECCSS-------EEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CCcEEEEEecCCC-------cceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 8877765543211 1225678999877 56677778888988653
No 123
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.78 E-value=2.7e-17 Score=145.59 Aligned_cols=151 Identities=17% Similarity=0.243 Sum_probs=125.7
Q ss_pred eeecCCCceEEEEEecCCeEEEecCCCcc--ceeeEeeccccccEEEEEeeeCCCcc-EEEEEcCCCeEEEEECCCCeEE
Q psy4650 39 ITTNKDMIEYKISYQESSRVKAFNPIQVA--TLILKTLYGHEKGVNCVDYYHGGDKP-YLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 39 i~~~~~~~~~~~s~~~d~~v~i~~~~~~~--~~~~~~l~~h~~~v~~~~~~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
+...++ +.++++++.|++|++||+.... .........|.+.|.++.++|.+... .+++++.+++|++||.......
T Consensus 156 ~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~ 234 (318)
T 4ggc_A 156 LRWAPD-GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 234 (318)
T ss_dssp EEECTT-SSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEE
T ss_pred EEEcCC-CCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccc
Confidence 333443 5689999999999999986532 23445667889999999999976642 2357788999999999988766
Q ss_pred EEeccCCCCEEEEEEecCCCEEEEEe--CCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEE
Q psy4650 116 QTLEGHGQNISAVCFHPELPIVITGS--EDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLK 191 (381)
Q Consensus 116 ~~~~~~~~~v~~~~~~p~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~ 191 (381)
.... +...+..+.|+|.+..+++++ .|+.|++||+.+++.+..+.+|.+.|++++|+|+|++|++|+.||.|++|
T Consensus 235 ~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iW 311 (318)
T 4ggc_A 235 SAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW 311 (318)
T ss_dssp EEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEE
T ss_pred cccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEE
Confidence 6554 667899999999999776654 79999999999999999999999999999999999999999999999994
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.78 E-value=3.8e-17 Score=149.25 Aligned_cols=195 Identities=13% Similarity=0.148 Sum_probs=152.6
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
+..+...+++..++++++.+++|++||+.. ...+..+..|. .+.+++|+|++.. ++++++.++.|++||+.+++.+
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~--~~~~~~~~~~~-~v~~~~~spdg~~-l~~~~~~~~~v~v~d~~~~~~~ 109 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSNDVSIIDTAT--NNVIATVPAGS-SPQGVAVSPDGKQ-VYVTNMASSTLSVIDTTSNTVA 109 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEETTT--TEEEEEEECSS-SEEEEEECTTSSE-EEEEETTTTEEEEEETTTTEEE
T ss_pred cceEEECCCCCEEEEECCCCCeEEEEECCC--CeEEEEEECCC-CccceEECCCCCE-EEEEECCCCEEEEEECCCCeEE
Confidence 567778888666668888999999999864 44556666554 9999999998872 4467778899999999999988
Q ss_pred EEeccCCCCEEEEEEecCCCEE-EEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEE-EEEeCCCeEEEEec
Q psy4650 116 QTLEGHGQNISAVCFHPELPIV-ITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNV-AIGYDEGSVLLKVG 193 (381)
Q Consensus 116 ~~~~~~~~~v~~~~~~p~~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l-~~~~~dg~v~i~~~ 193 (381)
..+..| ..+.+++|+|+++.+ ++++.++.|++||+.+++....+..+ ..+.+++|+|+++.+ ++++.++.+++
T Consensus 110 ~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~--- 184 (391)
T 1l0q_A 110 GTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISV--- 184 (391)
T ss_dssp EEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEE---
T ss_pred EEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEE---
Confidence 888755 468999999999977 67888999999999999988888765 567999999999877 56778899998
Q ss_pred CCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeeh---HHHHHhccCCCc
Q psy4650 194 REEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV---HVTIKYRLDISD 253 (381)
Q Consensus 194 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~---~d~~~~~~d~~~ 253 (381)
||..++.......... ....++++|+|..++++. .+...+.||+..
T Consensus 185 -------~d~~~~~~~~~~~~~~-------~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 185 -------IDTVTNSVIDTVKVEA-------APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp -------EETTTTEEEEEEECSS-------EEEEEEECTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred -------EECCCCeEEEEEecCC-------CccceEECCCCCEEEEEecCcCCCcEEEEECCC
Confidence 7777777665543221 111256789998888877 466778888754
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.78 E-value=1.7e-17 Score=153.76 Aligned_cols=195 Identities=9% Similarity=0.012 Sum_probs=154.4
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeE-----eeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECC
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILK-----TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 110 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~-----~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~ 110 (381)
+..+...+ ...++++++.+++|++||+... .... .+.+|.+.|.+++|+|++. ++++++.|+.|++||+.
T Consensus 125 ~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~s~~~d~~v~~~d~~ 199 (433)
T 3bws_A 125 PKSVRFID-NTRLAIPLLEDEGMDVLDINSG--QTVRLSPPEKYKKKLGFVETISIPEHNE--LWVSQMQANAVHVFDLK 199 (433)
T ss_dssp BCCCEESS-SSEEEEEBTTSSSEEEEETTTC--CEEEECCCHHHHTTCCEEEEEEEGGGTE--EEEEEGGGTEEEEEETT
T ss_pred ceEEEEeC-CCeEEEEeCCCCeEEEEECCCC--eEeeecCcccccccCCceeEEEEcCCCE--EEEEECCCCEEEEEECC
Confidence 34566666 5778889999999999998743 2333 4568999999999988765 89999999999999999
Q ss_pred CCeEEEEeccCCCCEEEEEEecCCCEEE-EEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEe------
Q psy4650 111 NKTCVQTLEGHGQNISAVCFHPELPIVI-TGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGY------ 183 (381)
Q Consensus 111 ~~~~~~~~~~~~~~v~~~~~~p~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~------ 183 (381)
+++.+..+..|...+.+++|+|++..++ +++.|+.|++||+.+++....+..+ ..+.+++|+|+|+.+++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~ 278 (433)
T 3bws_A 200 TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQ 278 (433)
T ss_dssp TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTT
T ss_pred CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCcc
Confidence 9999999988999999999999999775 5557999999999999988877654 5689999999999998887
Q ss_pred --CCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEE-eeehHHHHHhccCCCc
Q psy4650 184 --DEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVL-TLSVHVTIKYRLDISD 253 (381)
Q Consensus 184 --~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l-~~~~~d~~~~~~d~~~ 253 (381)
.||.+++ ||..++..+....... ....+.|+|+|..+ +++..++....|++..
T Consensus 279 ~~~dg~i~~----------~d~~~~~~~~~~~~~~-------~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~ 334 (433)
T 3bws_A 279 ESGGGRLGI----------YSMDKEKLIDTIGPPG-------NKRHIVSGNTENKIYVSDMCCSKIEVYDLKE 334 (433)
T ss_dssp CSCCEEEEE----------EETTTTEEEEEEEEEE-------CEEEEEECSSTTEEEEEETTTTEEEEEETTT
T ss_pred ccCCCeEEE----------EECCCCcEEeeccCCC-------CcceEEECCCCCEEEEEecCCCEEEEEECCC
Confidence 4778888 8887777665542211 11125678898644 5667888888898864
No 126
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.75 E-value=2.3e-17 Score=152.90 Aligned_cols=151 Identities=13% Similarity=0.129 Sum_probs=117.5
Q ss_pred eeeecCCCceEEEEEecCCeEEEecCCCcc---------ceee----EeeccccccEEEEEeeeCCCccEEE----EEcC
Q psy4650 38 DITTNKDMIEYKISYQESSRVKAFNPIQVA---------TLIL----KTLYGHEKGVNCVDYYHGGDKPYLI----SGAD 100 (381)
Q Consensus 38 ~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~---------~~~~----~~l~~h~~~v~~~~~~~~~~~~~l~----s~~~ 100 (381)
.+...+. ..++++++.++ +++|+..... .... .....|.+.|.+++|+|++. +|+ +|+.
T Consensus 41 ~lavs~~-~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~--~lav~~~sgs~ 116 (434)
T 2oit_A 41 LLAVSNK-YGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNL--TLSACMMSSEY 116 (434)
T ss_dssp CEEEETT-TTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSC--EEEEEEEETTT
T ss_pred EEEEecC-CCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCC--EEEEEEeccCC
Confidence 3444444 34677777776 8887652110 0000 01123567899999999877 777 8999
Q ss_pred CCeEEEEECCCC--------e---EEEEeccCCCCEEEEEEecC-CCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceE
Q psy4650 101 DRLVKIWDYQNK--------T---CVQTLEGHGQNISAVCFHPE-LPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVW 168 (381)
Q Consensus 101 d~~v~vwd~~~~--------~---~~~~~~~~~~~v~~~~~~p~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~ 168 (381)
|++|++||+.++ + ....+.+|...|.+++|+|+ +.++++++.||+|++||++++.......+|...|.
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~ 196 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVT 196 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEE
T ss_pred CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCcee
Confidence 999999998654 1 24667789999999999998 78999999999999999999987777777889999
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEe
Q psy4650 169 TISSLKGSNNVAIGYDEGSVLLKV 192 (381)
Q Consensus 169 ~v~~~~~~~~l~~~~~dg~v~i~~ 192 (381)
+++|+|+|++|++|+.||.+++|+
T Consensus 197 ~v~wspdg~~lasgs~dg~v~iwd 220 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQNGTVVQYL 220 (434)
T ss_dssp EEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEc
Confidence 999999999999999999999943
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.74 E-value=1e-16 Score=148.45 Aligned_cols=144 Identities=12% Similarity=0.036 Sum_probs=116.0
Q ss_pred ceeeeecCCCceEEE----EEecCCeEEEecCCCc-----cc----eeeEeeccccccEEEEEeeeCCCccEEEEEcCCC
Q psy4650 36 KVDITTNKDMIEYKI----SYQESSRVKAFNPIQV-----AT----LILKTLYGHEKGVNCVDYYHGGDKPYLISGADDR 102 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~----s~~~d~~v~i~~~~~~-----~~----~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~ 102 (381)
...+.+++++ .+++ +++.|++|++||+... .. ..+..+.+|.+.|.+++|+|+.. .+|++++.||
T Consensus 95 v~~l~~spdg-~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~-~~las~s~Dg 172 (434)
T 2oit_A 95 IHHLALSCDN-LTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVP-SMVAVCLADG 172 (434)
T ss_dssp EEEEEECTTS-CEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCT-TEEEEEETTS
T ss_pred ccEEEEcCCC-CEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCC-CEEEEEECCC
Confidence 4567777774 4666 8889999999998532 00 12466778999999999999733 3899999999
Q ss_pred eEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecC-------CcceEEEEEcCC
Q psy4650 103 LVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYG-------LERVWTISSLKG 175 (381)
Q Consensus 103 ~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-------~~~v~~v~~~~~ 175 (381)
+|++||++++.......+|...|.+++|+|+|.+|++|+.||.|++||.+ +.....+..+ ...+.+++|+++
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~ 251 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGT 251 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEET
T ss_pred eEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecC
Confidence 99999999987777777899999999999999999999999999999998 5555555433 238999999998
Q ss_pred CCEEEEE
Q psy4650 176 SNNVAIG 182 (381)
Q Consensus 176 ~~~l~~~ 182 (381)
+.++++.
T Consensus 252 ~~~l~~~ 258 (434)
T 2oit_A 252 YVFAIVY 258 (434)
T ss_dssp TEEEEEE
T ss_pred ceEEEEE
Confidence 8776543
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.74 E-value=3e-16 Score=145.27 Aligned_cols=183 Identities=13% Similarity=0.028 Sum_probs=144.0
Q ss_pred eeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
..+...++ +.++++++.++.+++||+.. ...+..+.+|...+.+++|+|++.. ++++++.|+.|++||+.+++.+.
T Consensus 173 ~~~~~~~~-~~~~~s~~~d~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 173 ETISIPEH-NELWVSQMQANAVHVFDLKT--LAYKATVDLTGKWSKILLYDPIRDL-VYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEEEEGGG-TEEEEEEGGGTEEEEEETTT--CCEEEEEECSSSSEEEEEEETTTTE-EEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEEEcCC-CEEEEEECCCCEEEEEECCC--ceEEEEEcCCCCCeeEEEEcCCCCE-EEEEecCCCcEEEEECCCCcEEE
Confidence 34555444 66899999999999999864 4556777889999999999998772 44677789999999999999888
Q ss_pred EeccCCCCEEEEEEecCCCEEEEEe--------CCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEE-EEEeCCCe
Q psy4650 117 TLEGHGQNISAVCFHPELPIVITGS--------EDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNV-AIGYDEGS 187 (381)
Q Consensus 117 ~~~~~~~~v~~~~~~p~~~~l~s~~--------~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l-~~~~~dg~ 187 (381)
.+..+ ..+.+++|+|++..+++++ .|+.|++||+.+++....+. +...+.+++|+|+++.+ ++++.++.
T Consensus 249 ~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~ 326 (433)
T 3bws_A 249 KTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSK 326 (433)
T ss_dssp ECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTE
T ss_pred EecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCE
Confidence 88764 4689999999999888887 58899999999998777663 45688999999999754 66688999
Q ss_pred EEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehH
Q psy4650 188 VLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVH 242 (381)
Q Consensus 188 v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~ 242 (381)
+.+ ||..++..+....... ....++++|+|..++++..
T Consensus 327 v~v----------~d~~~~~~~~~~~~~~-------~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 327 IEV----------YDLKEKKVQKSIPVFD-------KPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp EEE----------EETTTTEEEEEEECSS-------SEEEEEECTTSSEEEEEEC
T ss_pred EEE----------EECCCCcEEEEecCCC-------CCCeEEEcCCCCEEEEEec
Confidence 999 8887777766553221 1112578899988887765
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.71 E-value=4.9e-16 Score=143.27 Aligned_cols=176 Identities=13% Similarity=0.069 Sum_probs=132.0
Q ss_pred CeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCC---eEEEEECCCCeEEEEeccCCCCEEEEEEec
Q psy4650 56 SRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDR---LVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132 (381)
Q Consensus 56 ~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~---~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p 132 (381)
++|++||+.. .....+.+|.+.+.+++|+|++. .|++++.++ .|++||+.+++.. .+..|...+.+++|+|
T Consensus 159 ~~i~i~d~~g---~~~~~l~~~~~~v~~~~~Spdg~--~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~sp 232 (415)
T 2hqs_A 159 YELRVSDYDG---YNQFVVHRSPQPLMSPAWSPDGS--KLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSP 232 (415)
T ss_dssp EEEEEEETTS---CSCEEEEEESSCEEEEEECTTSS--EEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECT
T ss_pred ceEEEEcCCC---CCCEEEeCCCCcceeeEEcCCCC--EEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcC
Confidence 7999999853 34577888999999999999887 788888875 9999999998765 4666888999999999
Q ss_pred CCCEEE-EEeCCCC--EEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeC-CCeEEEEecCCCceEEEecCCCEE
Q psy4650 133 ELPIVI-TGSEDGS--VRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYD-EGSVLLKVGREEPAVSMDVNGCKI 208 (381)
Q Consensus 133 ~~~~l~-s~~~d~~--i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~-dg~v~i~~~~~~~~~~~d~~~~~~ 208 (381)
+|+.|+ +++.++. |++||+.+++. ..+..+...+.+++|+|+|+.++.++. ++...+|. ||..++..
T Consensus 233 dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~--------~d~~~~~~ 303 (415)
T 2hqs_A 233 DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK--------VNINGGAP 303 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE--------EETTSSCC
T ss_pred CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE--------EECCCCCE
Confidence 999777 6666655 99999998875 556677788999999999999888876 45444432 67766542
Q ss_pred EEEecCceeecccccCCccccccCCceEEeeehHH---HHHhccCCCc
Q psy4650 209 IWARHSEVQQANLKTMPEVFENITAGVVLTLSVHV---TIKYRLDISD 253 (381)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d---~~~~~~d~~~ 253 (381)
.. +..+ ........|+|||+.++++..+ ...+.|++..
T Consensus 304 ~~-l~~~------~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 304 QR-ITWE------GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT 344 (415)
T ss_dssp EE-CCCS------SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT
T ss_pred EE-EecC------CCcccCeEECCCCCEEEEEECcCCceEEEEEECCC
Confidence 21 1111 0111125789999999887764 3566777754
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.68 E-value=3.6e-15 Score=137.45 Aligned_cols=191 Identities=9% Similarity=-0.002 Sum_probs=139.2
Q ss_pred ceeeeecCCCceEEEEEecCC---eEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEE-EEcCCCe--EEEEEC
Q psy4650 36 KVDITTNKDMIEYKISYQESS---RVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLI-SGADDRL--VKIWDY 109 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~---~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~-s~~~d~~--v~vwd~ 109 (381)
...+.+.+++ ..++.++.++ .|++||+.... ...+.+|.+.+.+++|+|++. .|+ +++.++. |.+||+
T Consensus 181 v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~tg~---~~~l~~~~~~~~~~~~spdg~--~la~~~~~~g~~~i~~~d~ 254 (415)
T 2hqs_A 181 LMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGA---VRQVASFPRHNGAPAFSPDGS--KLAFALSKTGSLNLYVMDL 254 (415)
T ss_dssp EEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCC---EEEEECCSSCEEEEEECTTSS--EEEEEECTTSSCEEEEEET
T ss_pred ceeeEEcCCC-CEEEEEEecCCCcEEEEEECCCCc---EEEeecCCCcccCEEEcCCCC--EEEEEEecCCCceEEEEEC
Confidence 3456677774 4677777664 99999997432 245678889999999999887 455 7766654 999999
Q ss_pred CCCeEEEEeccCCCCEEEEEEecCCCEEEEEeC-CC--CEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCC-
Q psy4650 110 QNKTCVQTLEGHGQNISAVCFHPELPIVITGSE-DG--SVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDE- 185 (381)
Q Consensus 110 ~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~-d~--~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d- 185 (381)
.+++. ..+..|...+.+++|+|+|+.++.++. ++ .|.+||+.+++. ..+..+...+.+++|+|+|++++.++.+
T Consensus 255 ~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~ 332 (415)
T 2hqs_A 255 ASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNG 332 (415)
T ss_dssp TTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECS
T ss_pred CCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcC
Confidence 98875 567778889999999999998888776 44 677789988764 3445566788999999999999888764
Q ss_pred --CeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHH---HHhccCCC
Q psy4650 186 --GSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVT---IKYRLDIS 252 (381)
Q Consensus 186 --g~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~---~~~~~d~~ 252 (381)
+.+.+ ||..++.... +... . ......|+|||+.+++++.+. ..+.|++.
T Consensus 333 g~~~i~~----------~d~~~~~~~~-l~~~------~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 333 GQQHIAK----------QDLATGGVQV-LSST------F-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp SCEEEEE----------EETTTCCEEE-CCCS------S-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred CceEEEE----------EECCCCCEEE-ecCC------C-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 35555 8887765432 2111 0 122257899999999888766 45667664
No 131
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.65 E-value=2e-18 Score=166.65 Aligned_cols=295 Identities=15% Similarity=0.146 Sum_probs=182.5
Q ss_pred chhhhHHHhhhhhcccccccCCChhhHHHHhhhcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeecccc---
Q psy4650 2 SRLISQAKNTIIKNKRALNTELTETDIETIVRETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHE--- 78 (381)
Q Consensus 2 ~~~~~~~~~t~~~~k~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~--- 78 (381)
+++.+||.||++.+||++|++++++.++...+..||.+...+++. ..+.....|.-+.|.+.+....++..++.+.
T Consensus 55 ~~~~~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~v~~~~~g~-~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~ 133 (675)
T 3d2f_A 55 NKQTSNIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKK-TGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQD 133 (675)
T ss_dssp HHHTTCGGGEECCHHHHTTCBTTCTTHHHHHTTCCSEEEECTTSB-EEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhChHhHHHHHHHHhCCCCCcHHHHHHHhhCCeeEEEcCCCc-eEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHH
Confidence 567889999999999999999999999999999999998765533 3333344455567887666666666554321
Q ss_pred --ccEEEEEee-eCC----CccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEE-EeCCCCEEEEe
Q psy4650 79 --KGVNCVDYY-HGG----DKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVIT-GSEDGSVRVWH 150 (381)
Q Consensus 79 --~~v~~~~~~-~~~----~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s-~~~d~~i~vwd 150 (381)
..+..+.++ |.. +++.+..+. .......+..+....+.. ++|.-+...+.. -..+..+.|+|
T Consensus 134 lg~~v~~~VITVPa~f~~~qR~a~~~Aa--------~~AGl~~~~li~EP~AAA--laygl~~~~~~~~~~~~~~vlV~D 203 (675)
T 3d2f_A 134 TKANITDVCIAVPPWYTEEQRYNIADAA--------RIAGLNPVRIVNDVTAAG--VSYGIFKTDLPEGEEKPRIVAFVD 203 (675)
T ss_dssp HCSCCCEEEEEECTTCCHHHHHHHHHHH--------HHTTCEEEEEEEHHHHHH--HHHHHHCSCCCCSSSCCEEEEEEE
T ss_pred hCCCcceEEEEECCCCCHHHHHHHHHHH--------HHcCCceEEEEcchHHHH--HHHhhhccccccccCCCcEEEEEE
Confidence 122222111 100 000000000 000011122222111110 000000000000 01245688899
Q ss_pred CCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccc
Q psy4650 151 SGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFEN 230 (381)
Q Consensus 151 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (381)
+..|+...++- .+. +|.+.+-. ..+|. .+++...
T Consensus 204 lGGGT~Dvsv~---------~~~-----------~g~~~V~a------~~gd~----------------~lGG~d~---- 237 (675)
T 3d2f_A 204 IGHSSYTCSIM---------AFK-----------KGQLKVLG------TACDK----------------HFGGRDF---- 237 (675)
T ss_dssp ECSSCEEEEEE---------EEE-----------TTEEEEEE------EEEET----------------TCSHHHH----
T ss_pred cCCCcEEEEEE---------Eec-----------CCeEEEEE------EcCCC----------------CccHHHH----
Confidence 88877544332 111 11111100 00111 2222221
Q ss_pred cCCceEEeeehHHHHHhccCCCcChhHHHHHHHHHhhhhhhccccceeeEEEecccCCcccccccChHHHHHHHHHHhhh
Q psy4650 231 ITAGVVLTLSVHVTIKYRLDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTS 310 (381)
Q Consensus 231 ~~dg~~l~~~~~d~~~~~~d~~~~~~~~~~l~~~~e~ak~~lS~~~~~~i~~~~l~~g~~~~~~itr~~fe~l~~~l~~~ 310 (381)
+....-++...+...+..++..+++++++|+.+||++|+.||...++.+.++++++|.++..+++|++|++++.+++.+
T Consensus 238 -D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~ 316 (675)
T 3d2f_A 238 -DLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLER 316 (675)
T ss_dssp -HHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTT
T ss_pred -HHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHH
Confidence 1111111222334456677778899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHhhhccccceeeEeeccccCcceEEeecHHHHHHHHHHHHHH
Q psy4650 311 FVQPCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTS 357 (381)
Q Consensus 311 ~~~~~~~~Ls~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 357 (381)
+.++++++|..+ .+..+.++.++++||+.++|.++++++++|++
T Consensus 317 i~~~i~~~L~~a---~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~ 360 (675)
T 3d2f_A 317 VTEPVTKALAQA---KLSAEEVDFVEIIGGTTRIPTLKQSISEAFGK 360 (675)
T ss_dssp TTHHHHHHHHHH---TCCGGGCCEEEEESGGGGSHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHh---CCChhhCcEEEEECCCccChHHHHHHHHhcCC
Confidence 999999999874 45566788889999999999999999999984
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.61 E-value=8.8e-14 Score=124.77 Aligned_cols=198 Identities=13% Similarity=0.055 Sum_probs=147.6
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccc---------cEEEEEeeeCCCccEEEEE-cCCCeE
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEK---------GVNCVDYYHGGDKPYLISG-ADDRLV 104 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~---------~v~~~~~~~~~~~~~l~s~-~~d~~v 104 (381)
.+..+...+++..++++...++.+.+||+.. ...+..+..+.. .+.++.|+|++.. +++++ +.++.|
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~i 166 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKT--GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNT-VYISGIGKESVI 166 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTT--CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTE-EEEEEESSSCEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCC--CeeEEEEecCCCccccccCCCCCceEEECCCCCE-EEEEecCCCceE
Confidence 3556677777666777878889999999864 334455554432 2788999998873 33333 468999
Q ss_pred EEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEec----CCcceEEEEEcCCCCEEE
Q psy4650 105 KIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTY----GLERVWTISSLKGSNNVA 180 (381)
Q Consensus 105 ~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~----~~~~v~~v~~~~~~~~l~ 180 (381)
.+||..+++....+..+...+.+++|+|++..++.++.++.+.+||..+++....+.. +...+..++|+|+|+.++
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 246 (353)
T 3vgz_A 167 WVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAF 246 (353)
T ss_dssp EEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred EEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence 9999999998888876666688999999999999999999999999999998887764 455678899999999776
Q ss_pred EEeC-CCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeeh-HHHHHhccCCCc
Q psy4650 181 IGYD-EGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV-HVTIKYRLDISD 253 (381)
Q Consensus 181 ~~~~-dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~-~d~~~~~~d~~~ 253 (381)
+++. ++.+.+ ||..++..+....... ...+.++|||..+++.. .++....||...
T Consensus 247 ~~~~~~~~v~~----------~d~~~~~~~~~~~~~~--------~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 247 ITDSKAAEVLV----------VDTRNGNILAKVAAPE--------SLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp EEESSSSEEEE----------EETTTCCEEEEEECSS--------CCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEeCCCCEEEE----------EECCCCcEEEEEEcCC--------CceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 6654 478887 8887777666554321 12257889998665554 566777787654
No 133
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.61 E-value=1.1e-17 Score=158.83 Aligned_cols=289 Identities=17% Similarity=0.270 Sum_probs=178.8
Q ss_pred chhhhHHHhhhhhcccccccCCChhhHHHHhhhcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeecccc---
Q psy4650 2 SRLISQAKNTIIKNKRALNTELTETDIETIVRETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHE--- 78 (381)
Q Consensus 2 ~~~~~~~~~t~~~~k~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~--- 78 (381)
+++.+||.||++.+||++|++|+++.++...+.+||.+...+ +...+....++..+.|.+.+.....+..++.+.
T Consensus 57 ~~~~~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~v~~~~--g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~ 134 (554)
T 1yuw_A 57 NQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDA--GRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAY 134 (554)
T ss_dssp TTTTTCGGGEECCGGGTTTCCSSCSHHHHHHTTCSSEEEEET--TEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhChhhehHhhHHhcCCCCCcHHHHHHhhcCCeEEEecC--CceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHH
Confidence 567889999999999999999999999999999999988543 233333444556677887766666666554321
Q ss_pred --ccEEEEEee-eCC----CccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeC
Q psy4650 79 --KGVNCVDYY-HGG----DKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151 (381)
Q Consensus 79 --~~v~~~~~~-~~~----~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~ 151 (381)
..+..+.++ |.. +++.+..+. ....-..+..+....+. ++++.-+... ..+..+.|+|+
T Consensus 135 lg~~v~~~VitVPa~f~~~qr~a~~~A~--------~~AGl~~~~li~EP~AA--Alay~~~~~~----~~~~~vlV~D~ 200 (554)
T 1yuw_A 135 LGKTVTNAVVTVPAYFNDSQRQATKDAG--------TIAGLNVLRIINEPTAA--AIAYGLDKKV----GAERNVLIFDL 200 (554)
T ss_dssp HSSCCCEEEEEECTTCCHHHHHHHHHHH--------HTTTCEEEEEEEHHHHH--HHHTTCSTTC----SSCEEEEEEEE
T ss_pred hCCCCCeEEEEECCCCCHHHHHHHHHHH--------HHcCCCeEEEeCcHHHH--HHHHHhhccC----CCCcEEEEEEc
Confidence 122222111 100 000000000 00001112222111110 0001000000 12456888888
Q ss_pred CCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCcccccc
Q psy4650 152 GTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENI 231 (381)
Q Consensus 152 ~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (381)
..|+...++-. +. +|.+.+-. ...+ ..+++...
T Consensus 201 GgGT~Dvsv~~---------~~-----------~g~~~v~a------~~g~----------------~~lGG~d~----- 233 (554)
T 1yuw_A 201 GGGTFDVSILT---------IA-----------AGIFEVKS------TAGD----------------THLGGEDF----- 233 (554)
T ss_dssp CSSCEEEEEEE---------EE-----------TTEEEEEE------EEEE----------------TTCSHHHH-----
T ss_pred CCCeEEEEEEE---------Ec-----------CCcEEEEE------EeCC----------------CCCCHHHH-----
Confidence 87765443321 10 11111100 0011 12222111
Q ss_pred CCceEEeeehHHHHHhccCCCcChhHHHHHHHHHhhhhhhccccceeeEEEecccCCcccccccChHHHHHHHHHHhhhh
Q psy4650 232 TAGVVLTLSVHVTIKYRLDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSF 311 (381)
Q Consensus 232 ~dg~~l~~~~~d~~~~~~d~~~~~~~~~~l~~~~e~ak~~lS~~~~~~i~~~~l~~g~~~~~~itr~~fe~l~~~l~~~~ 311 (381)
+....-++.......+..++..+++++++++.++|++|+.||...++.+.++++++|.++...++|++|++++.+++.++
T Consensus 234 d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i 313 (554)
T 1yuw_A 234 DNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGT 313 (554)
T ss_dssp HHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHH
Confidence 01000112223334556677788899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhccccceeeEeeccccCcceEEeecHHHHHHHHHHHHH
Q psy4650 312 VQPCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLT 356 (381)
Q Consensus 312 ~~~~~~~Ls~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 356 (381)
.++++++|..+ .+....+..++++||+.+.|.+++++++.|+
T Consensus 314 ~~~i~~~L~~a---~~~~~~i~~VvLvGG~srip~v~~~l~~~f~ 355 (554)
T 1yuw_A 314 LDPVEKALRDA---KLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355 (554)
T ss_dssp THHHHHHHHHT---TCCGGGCCEEEEESGGGGCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHc---CCChhhCcEEEEECCcccChHHHHHHHHHcC
Confidence 99999999874 4455677888999999999999999999996
No 134
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.59 E-value=1.3e-17 Score=159.68 Aligned_cols=290 Identities=13% Similarity=0.161 Sum_probs=178.0
Q ss_pred chhhhHHHhhhhhcccccccCCChhhHHHHhhhcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeecccc---
Q psy4650 2 SRLISQAKNTIIKNKRALNTELTETDIETIVRETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHE--- 78 (381)
Q Consensus 2 ~~~~~~~~~t~~~~k~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~--- 78 (381)
+++.+||.||++.+||++|++|++|.++...+..||.+...+++...+ .. ++ +.|.+.+.....+..++.+.
T Consensus 56 ~~~~~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~~~~~~~g~~~~-~~--~~--~~~~p~ei~a~iL~~lk~~ae~~ 130 (605)
T 4b9q_A 56 RQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWV-EV--KG--QKMAPPQISAEVLKKMKKTAEDY 130 (605)
T ss_dssp HTTTTCGGGEECCGGGTTTCBTTSHHHHHHHTTCSSEEEECTTSBEEE-EE--TT--EEECHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCcEehhhHHhhCCCCCCHHHHHHhhcCCeEEEEcCCCceEE-EE--CC--EEECHHHHHHHHHHHHHHHHHHH
Confidence 567889999999999999999999999999999999998876544332 22 22 35777665555555554321
Q ss_pred --ccEEEEEee-eCC----CccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeC
Q psy4650 79 --KGVNCVDYY-HGG----DKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151 (381)
Q Consensus 79 --~~v~~~~~~-~~~----~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~ 151 (381)
..+..+.++ |.. ++..+..+. ....-..+..+....+. ++++.-+.. ..+..+.|+|+
T Consensus 131 lg~~v~~~VITVPa~f~~~qr~a~~~Aa--------~~AGl~v~~li~EP~AA--Alaygl~~~-----~~~~~vlV~Dl 195 (605)
T 4b9q_A 131 LGEPVTEAVITVPAYFNDAQRQATKDAG--------RIAGLEVKRIINEPTAA--ALAYGLDKG-----TGNRTIAVYDL 195 (605)
T ss_dssp HTSCCCEEEEEECTTCCHHHHHHHHHHH--------HHTTCEEEEEEEHHHHH--HHHHHTTSC-----CSSEEEEEEEE
T ss_pred hCCCCCeEEEEECCCCCHHHHHHHHHHH--------HHcCCceEEEeCcHHHH--HHHhhhhcc-----CCCCEEEEEEC
Confidence 122222111 100 000000000 00001122222222111 111100100 12457889999
Q ss_pred CCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCcccccc
Q psy4650 152 GTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENI 231 (381)
Q Consensus 152 ~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (381)
..|+...++-.... ..+. +.+.+ ........+++...
T Consensus 196 GGGT~Dvsi~~~~~------~~~~----------~~~ev----------------------la~~gd~~lGG~d~----- 232 (605)
T 4b9q_A 196 GGGAFDISIIEIDE------VDGE----------KTFEV----------------------LATNGDTHLGGEDF----- 232 (605)
T ss_dssp CSSCEEEEEEEEEE------SSSC----------EEEEE----------------------EEEEEETTCSHHHH-----
T ss_pred CCCeEEEEEEEEec------CCCC----------ceEEE----------------------EEecCCCCcChHHH-----
Confidence 88876544321100 0000 11111 00000012222111
Q ss_pred CCceEEeeehHHHHHhccCCCcChhHHHHHHHHHhhhhhhccccceeeEEEecccCC----cccccccChHHHHHHHHHH
Q psy4650 232 TAGVVLTLSVHVTIKYRLDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYDG----LDFHHNVSRARFESLIGGL 307 (381)
Q Consensus 232 ~dg~~l~~~~~d~~~~~~d~~~~~~~~~~l~~~~e~ak~~lS~~~~~~i~~~~l~~g----~~~~~~itr~~fe~l~~~l 307 (381)
+....-++.......+..++..+++++++|+.++|++|+.||...++.+.++.+..+ .++..+++|++|++++.++
T Consensus 233 D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~ 312 (605)
T 4b9q_A 233 DSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDL 312 (605)
T ss_dssp HHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHH
Confidence 111111122334445667788889999999999999999999999999998876543 6789999999999999999
Q ss_pred hhhhhhhhHhhhccccceeeEeeccccCcceEEeecHHHHHHHHHHHHHH
Q psy4650 308 LTSFVQPCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTS 357 (381)
Q Consensus 308 ~~~~~~~~~~~Ls~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 357 (381)
+.++.++++++|.. +.+....+..++++||+.++|.++++++++|++
T Consensus 313 ~~~i~~~v~~~L~~---a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~ 359 (605)
T 4b9q_A 313 VNRSIEPLKVALQD---AGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK 359 (605)
T ss_dssp HHHTTHHHHHHHHH---TTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHH---cCCCHHHCcEEEEeCCccCchHHHHHHHHHhcc
Confidence 99999999999987 455567788889999999999999999999974
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.58 E-value=1.2e-13 Score=122.90 Aligned_cols=195 Identities=10% Similarity=0.000 Sum_probs=133.5
Q ss_pred cCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE-EEEecc
Q psy4650 42 NKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC-VQTLEG 120 (381)
Q Consensus 42 ~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~-~~~~~~ 120 (381)
..+....+++++.++.|.+||+.. ......+..+...+ +++|+|++.. +++++..++.|.+||..++.. ...+..
T Consensus 6 ~~~~~~~~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~-~~~~s~dg~~-l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 6 QTTSNFGIVVEQHLRRISFFSTDT--LEILNQITLGYDFV-DTAITSDCSN-VVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp -CCCCEEEEEEGGGTEEEEEETTT--CCEEEEEECCCCEE-EEEECSSSCE-EEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred cCCCCEEEEEecCCCeEEEEeCcc--cceeeeEEccCCcc-eEEEcCCCCE-EEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 344466788899999999999874 33445555556666 9999998872 445555689999999999887 777776
Q ss_pred CCCCEEEEEEecCCCEEEEEeCCC---CEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEE-EEeCCCe-EEEEecCC
Q psy4650 121 HGQNISAVCFHPELPIVITGSEDG---SVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVA-IGYDEGS-VLLKVGRE 195 (381)
Q Consensus 121 ~~~~v~~~~~~p~~~~l~s~~~d~---~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~-~~~~dg~-v~i~~~~~ 195 (381)
+..+..+++|+|++++++++..++ .|.+||+.+++.+..+..+ ....+++|+|+|++++ ++..++. +.+|.
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~--- 157 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFK--- 157 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEE---
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEE---
Confidence 766666699999999888555443 8999999999988877654 4568999999998554 4455577 88844
Q ss_pred CceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeee-hHHHHHhccCCCc
Q psy4650 196 EPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLS-VHVTIKYRLDISD 253 (381)
Q Consensus 196 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~-~~d~~~~~~d~~~ 253 (381)
......+.... . ...........+.++|||+.+++. ..+.....|++..
T Consensus 158 -------~~~~g~~~~~~-~-~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 207 (331)
T 3u4y_A 158 -------IDADGVLFDTG-Q-EFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN 207 (331)
T ss_dssp -------ECTTCCEEEEE-E-EEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred -------ECCCCcEeecC-C-ccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 33222121111 0 001111222336789999866544 4566777888754
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.58 E-value=1.4e-13 Score=123.37 Aligned_cols=204 Identities=8% Similarity=0.025 Sum_probs=147.0
Q ss_pred hcceeeeecCCCceEEEEEec------CCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEE
Q psy4650 34 ETKVDITTNKDMIEYKISYQE------SSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 107 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~------d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vw 107 (381)
..++.+...+++..+.++... ++.|.+||+.. ...+..+.. ...+.++.|+|++.. +++++..++.|.+|
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~--~~~~~~~~~-~~~~~~~~~s~dg~~-l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVT--LEVTQAIHN-DLKPFGATINNTTQT-LWFGNTVNSAVTAI 116 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTT--CCEEEEEEE-SSCCCSEEEETTTTE-EEEEETTTTEEEEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCC--CeEEEEEec-CCCcceEEECCCCCE-EEEEecCCCEEEEE
Confidence 345667777775555444433 67899999864 334444443 345788999998873 56677778999999
Q ss_pred ECCCCeEEEEeccCCCC---------EEEEEEecCCCEEEEEe--CCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCC
Q psy4650 108 DYQNKTCVQTLEGHGQN---------ISAVCFHPELPIVITGS--EDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGS 176 (381)
Q Consensus 108 d~~~~~~~~~~~~~~~~---------v~~~~~~p~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~ 176 (381)
|..+++.+..+..+... +.+++|+|++..++.++ .++.|.+||..+++....+..+...+.+++|+|+|
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 99999988877654322 68899999999776665 47889999999999988887555668889999999
Q ss_pred CEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHH-HHHhccCCCc
Q psy4650 177 NNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHV-TIKYRLDISD 253 (381)
Q Consensus 177 ~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d-~~~~~~d~~~ 253 (381)
+.+++++.++.+.+ ||..++...+........ .......++++|+|..+++.... ...+.||...
T Consensus 197 ~~l~~~~~~~~i~~----------~d~~~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 262 (353)
T 3vgz_A 197 KRLYTTNADGELIT----------IDTADNKILSRKKLLDDG--KEHFFINISLDTARQRAFITDSKAAEVLVVDTRN 262 (353)
T ss_dssp TEEEEECTTSEEEE----------EETTTTEEEEEEECCCSS--SCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT
T ss_pred CEEEEEcCCCeEEE----------EECCCCeEEEEEEcCCCC--CCcccceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 99999999998888 888888877765431110 01111125678999877666543 5667777654
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.57 E-value=1.4e-13 Score=131.09 Aligned_cols=186 Identities=13% Similarity=0.080 Sum_probs=139.9
Q ss_pred ceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEEC--CCCeEEEEeccCCC
Q psy4650 46 IEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDY--QNKTCVQTLEGHGQ 123 (381)
Q Consensus 46 ~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~--~~~~~~~~~~~~~~ 123 (381)
+.++++++.+++|.+||... ..++.++..+.. +.+++|+|++. ++++++.|++|++||+ .+++.+..+. +..
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t--~~~~~~i~~g~~-~~~v~~spdg~--~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~ 222 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDS--KKIVKVIDTGYA-VHISRMSASGR--YLLVIGRDARIDMIDLWAKEPTKVAEIK-IGI 222 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTT--CCEEEEEECSTT-EEEEEECTTSC--EEEEEETTSEEEEEETTSSSCEEEEEEE-CCS
T ss_pred CEEEEEEcCCCeEEEEECCC--ceEEEEEecCcc-cceEEECCCCC--EEEEECCCCeEEEEECcCCCCcEEEEEe-cCC
Confidence 56888999999999999864 456677773333 89999999887 7999999999999999 8888888887 445
Q ss_pred CEEEEEEec----CCCEEEEEeC-CCCEEEEeCCCCeeeEEEecC-----------CcceEEEEEcCCCC-EEEEEeCCC
Q psy4650 124 NISAVCFHP----ELPIVITGSE-DGSVRVWHSGTHRLEISLTYG-----------LERVWTISSLKGSN-NVAIGYDEG 186 (381)
Q Consensus 124 ~v~~~~~~p----~~~~l~s~~~-d~~i~vwd~~~~~~~~~~~~~-----------~~~v~~v~~~~~~~-~l~~~~~dg 186 (381)
.+..++|+| +|+++++++. +++|.+||..+++.+..+..+ ...+.++.++|++. ++++...+|
T Consensus 223 ~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g 302 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG 302 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCC
Confidence 679999999 9999888874 899999999999998887642 22788999999766 456667788
Q ss_pred eEEEEecCCCceEEEecCCCEEE--EEecCceeecccccCCccccccCCceEEeee-hHHHHHhccCCCcC
Q psy4650 187 SVLLKVGREEPAVSMDVNGCKII--WARHSEVQQANLKTMPEVFENITAGVVLTLS-VHVTIKYRLDISDS 254 (381)
Q Consensus 187 ~v~i~~~~~~~~~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~-~~d~~~~~~d~~~~ 254 (381)
.+.+ ||..+...+ ..+. .......+.|+|||++++++ ..++.+..||....
T Consensus 303 ~i~v----------vd~~~~~~l~~~~i~-------~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg 356 (543)
T 1nir_A 303 KVLL----------VNYKDIDNLTVTSIG-------AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR 356 (543)
T ss_dssp EEEE----------EECTTSSSCEEEEEE-------CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred eEEE----------EEecCCCcceeEEec-------cCcCccCceECCCCCEEEEEecCCCeEEEEECCCC
Confidence 8888 555433211 1111 11222236789999976654 45667788887654
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.57 E-value=2.1e-13 Score=121.33 Aligned_cols=192 Identities=9% Similarity=-0.047 Sum_probs=138.6
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeec-c----ccccEEEEEeeeCCCccEEEEEc-----------
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLY-G----HEKGVNCVDYYHGGDKPYLISGA----------- 99 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~-~----h~~~v~~~~~~~~~~~~~l~s~~----------- 99 (381)
+..+...+++..++++++.++.|.+||+... ..+..+. + |...+.+++|+|++. +++.++
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~--~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKSESLVKIDLVTG--ETLGRIDLSTPEERVKSLFGAALSPDGK--TLAIYESPVRLELTHFE 111 (337)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEETTTC--CEEEEEECCBTTEEEECTTCEEECTTSS--EEEEEEEEEEECSSCEE
T ss_pred ccceEEcCCCCEEEEEeCCCCeEEEEECCCC--CeEeeEEcCCcccccccccceEECCCCC--EEEEEeccccccccccc
Confidence 6677788886667778888899999998643 3333333 2 223677899999887 566664
Q ss_pred -CCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCC--------------
Q psy4650 100 -DDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGL-------------- 164 (381)
Q Consensus 100 -~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-------------- 164 (381)
.++.|.+||..+++....+.. ...+.+++|+|+++.++.+ ++.|.+||+.+++....+..+.
T Consensus 112 ~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l 188 (337)
T 1pby_B 112 VQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAV 188 (337)
T ss_dssp ECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCC
T ss_pred ccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEE
Confidence 579999999999988777764 4457889999999988777 6889999999887765543321
Q ss_pred ----------------------------------------------------cceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy4650 165 ----------------------------------------------------ERVWTISSLKGSNNVAIGYDEGSVLLKV 192 (381)
Q Consensus 165 ----------------------------------------------------~~v~~v~~~~~~~~l~~~~~dg~v~i~~ 192 (381)
..+.+++|+|+|++++++ ++.+.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~-- 264 (337)
T 1pby_B 189 WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLES-- 264 (337)
T ss_dssp CCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEE--
T ss_pred eeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEE--
Confidence 123457888888877776 567766
Q ss_pred cCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 193 GREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 193 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
||..+++.+...... .....++++|||..++++..++....|++..
T Consensus 265 --------~d~~~~~~~~~~~~~-------~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 265 --------FDLEKNASIKRVPLP-------HSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp --------EETTTTEEEEEEECS-------SCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred --------EECCCCcCcceecCC-------CceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 888777776554322 1122367889999888887777788888754
No 139
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.56 E-value=2.5e-17 Score=157.79 Aligned_cols=290 Identities=14% Similarity=0.190 Sum_probs=175.4
Q ss_pred chhhhHHHhhhhhcccccccCCChhhHHHHhhhcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeecccc---
Q psy4650 2 SRLISQAKNTIIKNKRALNTELTETDIETIVRETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHE--- 78 (381)
Q Consensus 2 ~~~~~~~~~t~~~~k~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~--- 78 (381)
+++.+||.||++++||++|++|+++.++...+..||.+....++...+ .. +| +.|.+.+.....+..++.+.
T Consensus 56 ~~~~~~p~~t~~~~Kr~iG~~~~d~~v~~~~~~~p~~~~~~~~g~~~i-~~--~g--~~~~~~ei~a~~L~~l~~~ae~~ 130 (605)
T 2kho_A 56 RQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWV-EV--KG--QKMAPPQISAEVLKKMKKTAEDY 130 (605)
T ss_dssp TTTTTCGGGEEECGGGTTTCBSSSTTHHHHHHHCSSCEEECTTSBEEE-EE--TT--EEECHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhCCCCEeehhhHhhCCCCCcHHHHHHhhcCCeEEEECCCCceEE-EE--CC--EEEcHHHHHHHHHHHHHHHHHHH
Confidence 467789999999999999999999999999999999987665543333 32 33 35677655555555554321
Q ss_pred --ccEEEEEe-eeC----CCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeC
Q psy4650 79 --KGVNCVDY-YHG----GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHS 151 (381)
Q Consensus 79 --~~v~~~~~-~~~----~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~ 151 (381)
..+..+.+ .|. .+++.+..+. .......+..+....+. ++++.-+.. ..+..+.|+|+
T Consensus 131 l~~~v~~~VitVPa~f~d~qr~a~~~A~--------~~AGl~v~~li~EP~AA--Alay~l~~~-----~~~~~vlV~Dl 195 (605)
T 2kho_A 131 LGEPVTEAVITVPAYFNDAQRQATKDAG--------RIAGLEVKRIINEPTAA--ALAYGLDKG-----TGNRTIAVYDL 195 (605)
T ss_dssp HCSCCCEEEEEECTTCCHHHHHHHHHHH--------HTTTCEEEEEEEHHHHH--HHHTTTTSS-----SSEEEEEEEEE
T ss_pred hCCCCcEEEEEECCCCCHHHHHHHHHHH--------HHcCCceEEEecCHHHH--HHHhhhccc-----CCCCEEEEEEC
Confidence 11221111 110 0000000000 00001112222211110 001100100 02456888998
Q ss_pred CCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCcccccc
Q psy4650 152 GTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENI 231 (381)
Q Consensus 152 ~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (381)
..|+...++- .+.+.. .+|.+.+ . .......+++...
T Consensus 196 GGGT~Dvsi~---------~~~~~~-------~~g~~~v----------~------------a~~gd~~lGG~d~----- 232 (605)
T 2kho_A 196 GGGTFDISII---------EIDEVD-------GEKTFEV----------L------------ATNGDTHLGGEDF----- 232 (605)
T ss_dssp CSSCEEEEEE---------EEECTT-------TSCEEEE----------E------------EEEEESSCSGGGT-----
T ss_pred CCCeEEEEEE---------EEEecC-------CCCeEEE----------E------------EECCCCCccHHHH-----
Confidence 8877644332 111100 0111111 0 0000112232222
Q ss_pred CCceEEeeehHHHHHhccCCCcChhHHHHHHHHHhhhhhhccccceeeEEEecccC---C-cccccccChHHHHHHHHHH
Q psy4650 232 TAGVVLTLSVHVTIKYRLDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYD---G-LDFHHNVSRARFESLIGGL 307 (381)
Q Consensus 232 ~dg~~l~~~~~d~~~~~~d~~~~~~~~~~l~~~~e~ak~~lS~~~~~~i~~~~l~~---g-~~~~~~itr~~fe~l~~~l 307 (381)
+....-++.......+..++..+++++++|+.++|++|+.||...++.+.++++++ | .++..+++|++|++++.++
T Consensus 233 D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~ 312 (605)
T 2kho_A 233 DSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDL 312 (605)
T ss_dssp HHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCST
T ss_pred HHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHH
Confidence 11111112233344556678888899999999999999999999999999988765 3 6778899999999999999
Q ss_pred hhhhhhhhHhhhccccceeeEeeccccCcceEEeecHHHHHHHHHHHHHH
Q psy4650 308 LTSFVQPCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTS 357 (381)
Q Consensus 308 ~~~~~~~~~~~Ls~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 357 (381)
+.++.++++++|..+ .+....+..++++||+.++|.++++++++|++
T Consensus 313 ~~~i~~~i~~~L~~a---~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~ 359 (605)
T 2kho_A 313 VNRSIEPLKVALQDA---GLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK 359 (605)
T ss_dssp TGGGTSHHHHHHHTT---TCCTTTCSEEEEESGGGGSHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHc---CCChhhCceEEEECCcccChHHHHHHHHhcCC
Confidence 999999999999884 45556778889999999999999999999974
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.54 E-value=3.1e-14 Score=140.55 Aligned_cols=142 Identities=10% Similarity=-0.014 Sum_probs=108.7
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccc---cEEEEEeeeCCCccEEEEEcCC---------Ce
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEK---GVNCVDYYHGGDKPYLISGADD---------RL 103 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~---~v~~~~~~~~~~~~~l~s~~~d---------~~ 103 (381)
++.+.+.+++. ++++ +.||++++||+... .....+.+|.. .|.+++|+|+|. +|++++.+ +.
T Consensus 19 ~~~~~~spdg~-~~~~-~~dg~i~~~d~~~g--~~~~~~~~~~~~~~~v~~~~~SpDg~--~l~~~~~~~~~~~~~~~~~ 92 (723)
T 1xfd_A 19 DPEAKWISDTE-FIYR-EQKGTVRLWNVETN--TSTVLIEGKKIESLRAIRYEISPDRE--YALFSYNVEPIYQHSYTGY 92 (723)
T ss_dssp CCCCCBSSSSC-BCCC-CSSSCEEEBCGGGC--CCEEEECTTTTTTTTCSEEEECTTSS--EEEEEESCCCCSSSCCCSE
T ss_pred ccccEEcCCCc-EEEE-eCCCCEEEEECCCC--cEEEEeccccccccccceEEECCCCC--EEEEEecCccceeecceee
Confidence 56777788755 6665 78999999999743 33455566654 499999999987 78888764 78
Q ss_pred EEEEECCCCeEEEEe---ccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcc--------------
Q psy4650 104 VKIWDYQNKTCVQTL---EGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLER-------------- 166 (381)
Q Consensus 104 v~vwd~~~~~~~~~~---~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-------------- 166 (381)
+.+||+.+++. ..+ .+|...+..++|+|+|+.++.++. +.|++||+.+++.......+...
T Consensus 93 i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee 170 (723)
T 1xfd_A 93 YVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEE 170 (723)
T ss_dssp EEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHT
T ss_pred EEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEE
Confidence 88999998875 333 334455889999999999998886 78999999998876655544333
Q ss_pred ----eEEEEEcCCCCEEEEEeCC
Q psy4650 167 ----VWTISSLKGSNNVAIGYDE 185 (381)
Q Consensus 167 ----v~~v~~~~~~~~l~~~~~d 185 (381)
+.++.|+|+|+.|+.++.+
T Consensus 171 ~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 171 ILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp TSSSSEEEEECTTSSEEEEEEEE
T ss_pred eccCcceEEECCCCCEEEEEEEC
Confidence 3789999999999988755
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.53 E-value=6.9e-14 Score=133.11 Aligned_cols=206 Identities=14% Similarity=0.119 Sum_probs=144.9
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 114 (381)
.+..+...+++..++++...+++|.+||........+..+ .+...+.++.|+|++.. +++++..+++|.+||..+++.
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~-l~va~~~~~~v~v~D~~tg~l 358 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRY-FMTAANNSNKVAVIDSKDRRL 358 (543)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCE-EEEEEGGGTEEEEEETTTTEE
T ss_pred ceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCE-EEEEecCCCeEEEEECCCCeE
Confidence 3456777887788999999999999999875433222334 46677889999998872 445666799999999999998
Q ss_pred EEEecc----CCCCEEEEEEecC-CCEEEEEe-CCCCEEEEeCCC-------CeeeEEEecCCcceEEEEEcCCCCEEEE
Q psy4650 115 VQTLEG----HGQNISAVCFHPE-LPIVITGS-EDGSVRVWHSGT-------HRLEISLTYGLERVWTISSLKGSNNVAI 181 (381)
Q Consensus 115 ~~~~~~----~~~~v~~~~~~p~-~~~l~s~~-~d~~i~vwd~~~-------~~~~~~~~~~~~~v~~v~~~~~~~~l~~ 181 (381)
+..+.. |.+....+ ++|+ +..++++. .|++|.+||..+ ++.+.++.++...+..++++|+|+.|++
T Consensus 359 ~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v 437 (543)
T 1nir_A 359 SALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYV 437 (543)
T ss_dssp EEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEE
T ss_pred EEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEE
Confidence 888764 54433333 5787 55667765 589999999998 8899999998888899999999999999
Q ss_pred Ee-------CCCeEEEEecCCCceEEEecCCCEEEEEecCcee---ecccccCCccccccCCceEEeeeh-----HHHHH
Q psy4650 182 GY-------DEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQ---QANLKTMPEVFENITAGVVLTLSV-----HVTIK 246 (381)
Q Consensus 182 ~~-------~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dg~~l~~~~-----~d~~~ 246 (381)
++ .++.|.+ ||..++......-.-.. ...-......++|+|||..++++. .+..+
T Consensus 438 ~~~~~~~~~~~~~v~v----------~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i 507 (543)
T 1nir_A 438 DTTFNPDARISQSVAV----------FDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSAL 507 (543)
T ss_dssp CCTTCSSHHHHTCEEE----------EETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEE
T ss_pred ecCCCCCcccCceEEE----------EECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeE
Confidence 87 2668888 66655543211100000 000011112268899999999663 35666
Q ss_pred hccCCCc
Q psy4650 247 YRLDISD 253 (381)
Q Consensus 247 ~~~d~~~ 253 (381)
.+||...
T Consensus 508 ~v~D~~t 514 (543)
T 1nir_A 508 VVVDDKT 514 (543)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 7777654
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.53 E-value=1.2e-13 Score=123.35 Aligned_cols=190 Identities=11% Similarity=0.039 Sum_probs=125.4
Q ss_pred eEEEEEecCCeEEEecCCCccc-eeeEeeccccccEEEEEeeeCCCccEEEEEcCC-CeEEEEECC--CCe--EEEEecc
Q psy4650 47 EYKISYQESSRVKAFNPIQVAT-LILKTLYGHEKGVNCVDYYHGGDKPYLISGADD-RLVKIWDYQ--NKT--CVQTLEG 120 (381)
Q Consensus 47 ~~~~s~~~d~~v~i~~~~~~~~-~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d-~~v~vwd~~--~~~--~~~~~~~ 120 (381)
.++++++.++.|++|++..... ..+.. ..|...+.+++|+|++. ++++++.+ +.|.+|++. ++. .+..+..
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~--~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKR--YLYVGVRPEFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSS--EEEEEETTTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred EEEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCC--EEEEeecCCCeEEEEEecCCCCceeecccccc
Confidence 3455557899999999853222 23333 35778899999999887 57666665 999999997 554 3445554
Q ss_pred CCCCEEEEEEecCCCEEEEEeC-CCCEEEEeCC---CCeeeEEEecCCcceEEEEEcCCCCEEEEEe-CCCeEEEEecCC
Q psy4650 121 HGQNISAVCFHPELPIVITGSE-DGSVRVWHSG---THRLEISLTYGLERVWTISSLKGSNNVAIGY-DEGSVLLKVGRE 195 (381)
Q Consensus 121 ~~~~v~~~~~~p~~~~l~s~~~-d~~i~vwd~~---~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~-~dg~v~i~~~~~ 195 (381)
+. .+..++|+|+++.+++++. ++.|.+||+. .+.....+.. ...+.+++|+|+|+.+++++ .++.+.+
T Consensus 83 ~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~----- 155 (343)
T 1ri6_A 83 PG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICL----- 155 (343)
T ss_dssp SS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEE-----
T ss_pred CC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEE-----
Confidence 44 7799999999997776655 8889999994 3344444443 34588899999999888777 8899998
Q ss_pred CceEEEecCC-CEEEEEecCceeecccccCCccccccCCceEEeeeh-HHHHHhccCCC
Q psy4650 196 EPAVSMDVNG-CKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV-HVTIKYRLDIS 252 (381)
Q Consensus 196 ~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~-~d~~~~~~d~~ 252 (381)
||..+ +......... ...........+.|+|+|..+++.. .+.....|++.
T Consensus 156 -----~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 156 -----FTVSDDGHLVAQDPAE-VTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp -----EEECTTSCEEEEEEEE-EECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred -----EEecCCCceeeecccc-cccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 55544 3321110000 0000111112257889998776544 66667778774
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=1.2e-13 Score=120.36 Aligned_cols=179 Identities=9% Similarity=0.043 Sum_probs=124.2
Q ss_pred EEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCC-CeEEEEeccCC-CCEEEE
Q psy4650 51 SYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN-KTCVQTLEGHG-QNISAV 128 (381)
Q Consensus 51 s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~-~~~~~~~~~~~-~~v~~~ 128 (381)
+++.+++|++||+... ....+..|.+.|.+++|+|++. ++++++ ++.|.+||+.+ ++......+|. ..+.++
T Consensus 17 ~~~~~~~i~~~d~~~~---~~~~~~~~~~~v~~~~~spdg~--~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 90 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTR---KMRVVWQTPELFEAPNWSPDGK--YLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDH 90 (297)
T ss_dssp -CCCCEEEEEEETTTT---EEEEEEEESSCCEEEEECTTSS--EEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCC
T ss_pred CCCcceeEEEEeCCCC---ceeeeccCCcceEeeEECCCCC--EEEEEc-CCeEEEEeCCCCCCceEeccccccccccce
Confidence 4567889999998642 2345667899999999999887 677776 88999999999 87777666663 678999
Q ss_pred EEecCCCEEEEEe--CCCCEEEEeC--CCCeeeEEEecCCcceEEEEEcCCCCEEE-EEeCCCeEEEEecCCCceEEEec
Q psy4650 129 CFHPELPIVITGS--EDGSVRVWHS--GTHRLEISLTYGLERVWTISSLKGSNNVA-IGYDEGSVLLKVGREEPAVSMDV 203 (381)
Q Consensus 129 ~~~p~~~~l~s~~--~d~~i~vwd~--~~~~~~~~~~~~~~~v~~v~~~~~~~~l~-~~~~dg~v~i~~~~~~~~~~~d~ 203 (381)
+|+|++..+++++ .++...||.+ .++. ...+..+ ..+..++|+|+++.++ +++.++.+.+|. ++.
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~--------~~~ 160 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYS--------MDI 160 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEE--------EET
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEE--------EEC
Confidence 9999999999988 3445555554 4544 3334333 3588899999999877 677889888865 445
Q ss_pred CCCEEEEEecCceeecccccCCccccccCCceEEeeeh-HHHHHhccCCC
Q psy4650 204 NGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV-HVTIKYRLDIS 252 (381)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~-~d~~~~~~d~~ 252 (381)
.++.... .... ......+.|+|+|..+++.. .+....+|++.
T Consensus 161 ~~~~~~~-~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 161 DSGVETR-LTHG------EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp TTCCEEE-CCCS------SSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCcceE-cccC------CCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 4443221 1110 11112257889998877665 35555666553
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.52 E-value=7.4e-14 Score=138.30 Aligned_cols=148 Identities=11% Similarity=-0.027 Sum_probs=109.7
Q ss_pred hcceeeeecCCCceEEEEEec-CC-----eEEEecCCCccceeeEeecccc----------------------ccEEEEE
Q psy4650 34 ETKVDITTNKDMIEYKISYQE-SS-----RVKAFNPIQVATLILKTLYGHE----------------------KGVNCVD 85 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~-d~-----~v~i~~~~~~~~~~~~~l~~h~----------------------~~v~~~~ 85 (381)
.....+.+++++ .++++++. ++ .|++||+.......+....++. ..+.+++
T Consensus 37 ~~~~~~~~SpdG-~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 37 PTLMKPKVAPDG-SRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCEEEEECTTS-SEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCceEecCC-CEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 345678888884 46666666 77 8999998753332222222222 3378999
Q ss_pred eeeCCCccEEEEEcCCCeEEEEECCCCe--EEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecC
Q psy4650 86 YYHGGDKPYLISGADDRLVKIWDYQNKT--CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYG 163 (381)
Q Consensus 86 ~~~~~~~~~l~s~~~d~~v~vwd~~~~~--~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 163 (381)
|+|+|. +|++++. +.|.+||+.++. ....+..|...+.+++|+|+|+.++.++ ++.|.+||+.+++.......+
T Consensus 116 ~SpDg~--~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 116 WSPDAQ--RLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp ECTTSS--EEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCC
T ss_pred ECCCCC--EEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCC
Confidence 999887 6777775 999999999872 3455667888899999999999999887 458999999998766544433
Q ss_pred Ccc----------------eEEEEEcCCCCEEEEEeCCC
Q psy4650 164 LER----------------VWTISSLKGSNNVAIGYDEG 186 (381)
Q Consensus 164 ~~~----------------v~~v~~~~~~~~l~~~~~dg 186 (381)
... +.++.|+|+|+.|+.++.|+
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 322 47799999999999887664
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.52 E-value=4.5e-13 Score=119.47 Aligned_cols=203 Identities=10% Similarity=0.027 Sum_probs=129.9
Q ss_pred cceeeeecCCCceEEEEEecC-CeEEEecCC--CccceeeEeeccccccEEEEEeeeCCCccEE-EEEcCCCeEEEEECC
Q psy4650 35 TKVDITTNKDMIEYKISYQES-SRVKAFNPI--QVATLILKTLYGHEKGVNCVDYYHGGDKPYL-ISGADDRLVKIWDYQ 110 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d-~~v~i~~~~--~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l-~s~~~d~~v~vwd~~ 110 (381)
.+..+...+++. ++++++.+ +.+.+|++. ......+..+..+. .+.+++|+|++. ++ +++..++.|.+||+.
T Consensus 39 ~~~~~~~spdg~-~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~--~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 39 QVQPMVVSPDKR-YLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQ--FVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp CCCCEEECTTSS-EEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSS--EEEEEETTTTEEEEEEEE
T ss_pred CCceEEECCCCC-EEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCC--EEEEEecCCCeEEEEECC
Confidence 345566777644 45555554 999999986 32333445555444 788999999887 45 455568999999994
Q ss_pred ---CCeEEEEeccCCCCEEEEEEecCCCEEEEEe-CCCCEEEEeCCC-CeeeE----EEec-CCcceEEEEEcCCCCEEE
Q psy4650 111 ---NKTCVQTLEGHGQNISAVCFHPELPIVITGS-EDGSVRVWHSGT-HRLEI----SLTY-GLERVWTISSLKGSNNVA 180 (381)
Q Consensus 111 ---~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~-~d~~i~vwd~~~-~~~~~----~~~~-~~~~v~~v~~~~~~~~l~ 180 (381)
.......+..+ ..+.+++|+|++..+++++ .++.|.+||+.+ ++... .+.. ....+.+++|+|++++++
T Consensus 115 ~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~ 193 (343)
T 1ri6_A 115 DGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY 193 (343)
T ss_dssp TTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred CCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence 33445555544 4578999999999887777 799999999987 65432 2222 334788999999999775
Q ss_pred EEe-CCCeEEEEecCCCceEEEecC--CCEEE--EEecCceeecccccCCccccccCCceEEee-ehHHHHHhccCCC
Q psy4650 181 IGY-DEGSVLLKVGREEPAVSMDVN--GCKII--WARHSEVQQANLKTMPEVFENITAGVVLTL-SVHVTIKYRLDIS 252 (381)
Q Consensus 181 ~~~-~dg~v~i~~~~~~~~~~~d~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~-~~~d~~~~~~d~~ 252 (381)
+++ .++.+.+ |+.. ++... ...........-......++|+|||..+++ ...++....|++.
T Consensus 194 ~~~~~~~~i~~----------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 194 CVNELNSSVDV----------WELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEETTTTEEEE----------EESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEeCCCCEEEE----------EEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 554 7889998 4442 23211 111100000000001112678899987774 4466677788875
No 146
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.51 E-value=1.5e-12 Score=115.77 Aligned_cols=195 Identities=8% Similarity=0.101 Sum_probs=132.8
Q ss_pred eeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCC---eEEEEECCCCeE
Q psy4650 38 DITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDR---LVKIWDYQNKTC 114 (381)
Q Consensus 38 ~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~---~v~vwd~~~~~~ 114 (381)
.+...+++..+++++..++.|.+||+..... ....+..+..+..+++|+|++. +++++..++ .|.+||..+++.
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~s~dg~--~l~~~~~~~~~~~i~v~d~~~~~~ 120 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPP-KVVAIQEGQSSMADVDITPDDQ--FAVTVTGLNHPFNMQSYSFLKNKF 120 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSC-EEEEEEECSSCCCCEEECTTSS--EEEECCCSSSSCEEEEEETTTTEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCce-eEEecccCCCCccceEECCCCC--EEEEecCCCCcccEEEEECCCCCe
Confidence 6777777665666666689999999975322 1556666777776699999887 677555443 999999999998
Q ss_pred EEEeccCCCCEEEEEEecCCCEE-EEEeCCCC-EEEEeCCCCeeeE----EEecCCcceEEEEEcCCCCEEEE-EeCCCe
Q psy4650 115 VQTLEGHGQNISAVCFHPELPIV-ITGSEDGS-VRVWHSGTHRLEI----SLTYGLERVWTISSLKGSNNVAI-GYDEGS 187 (381)
Q Consensus 115 ~~~~~~~~~~v~~~~~~p~~~~l-~s~~~d~~-i~vwd~~~~~~~~----~~~~~~~~v~~v~~~~~~~~l~~-~~~dg~ 187 (381)
+..+..+ ....+++|+|+|+.+ +++..++. +.+|++.....+. ...........++|+|+|+++++ +..++.
T Consensus 121 ~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 199 (331)
T 3u4y_A 121 ISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNS 199 (331)
T ss_dssp EEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTE
T ss_pred EEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCe
Confidence 8877654 456999999999855 45566688 9999987543321 12233456889999999996555 446888
Q ss_pred EEEEecCCCceEEEecCCCEE---EEEecCceeecccccCCccccccCCceEEeeeh-HHHHHhccCCCc
Q psy4650 188 VLLKVGREEPAVSMDVNGCKI---IWARHSEVQQANLKTMPEVFENITAGVVLTLSV-HVTIKYRLDISD 253 (381)
Q Consensus 188 v~i~~~~~~~~~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~-~d~~~~~~d~~~ 253 (381)
+.+ ||..++.. +..... ......+.++|||+.+++.. .+.....|++..
T Consensus 200 v~v----------~d~~~~~~~~~~~~~~~-------~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 200 IGI----------LETQNPENITLLNAVGT-------NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp EEE----------EECSSTTSCEEEEEEEC-------SSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred EEE----------EECCCCcccceeeeccC-------CCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 888 66655543 332221 12222367899999776554 344566677643
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.50 E-value=1.9e-12 Score=116.07 Aligned_cols=207 Identities=10% Similarity=0.022 Sum_probs=130.7
Q ss_pred cceeeeecCCCceEEEEEec--CCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEc-CCCeEEEEECCC
Q psy4650 35 TKVDITTNKDMIEYKISYQE--SSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGA-DDRLVKIWDYQN 111 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~--d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~-~d~~v~vwd~~~ 111 (381)
.+..+...+++. +++++.. ++.|.+|++.......+..+..|...+..++|+|++. +|++++ .++.+.+|++..
T Consensus 41 ~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~--~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 41 NPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQ--LVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp CCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTT--EEEEEETTTTEEEEEEECT
T ss_pred CcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCC--EEEEEeCCCCEEEEEEeCC
Confidence 455567777755 4444332 6899999985434445566667888899999999887 566665 789999999963
Q ss_pred -C--eEEEEecc---------CCCCEEEEEEecCCCEEEEEeCCCCEEEEeCC-CCeeeE--EEec-CCcceEEEEEcCC
Q psy4650 112 -K--TCVQTLEG---------HGQNISAVCFHPELPIVITGSEDGSVRVWHSG-THRLEI--SLTY-GLERVWTISSLKG 175 (381)
Q Consensus 112 -~--~~~~~~~~---------~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~-~~~~~~--~~~~-~~~~v~~v~~~~~ 175 (381)
+ ..+..+.. +...+.+++|+|+|+.+++...++.|.+||+. ++.... .+.. ....+..++|+|+
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spd 197 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPD 197 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTT
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCC
Confidence 3 23333322 12248899999999966666678899999998 554332 2222 2336788999999
Q ss_pred CCEEEE-EeCCCeEEEEecCCCceEEEecCCCEEEE--EecCceeecccccCCccccccCCceEEeee-hHHHHHhccCC
Q psy4650 176 SNNVAI-GYDEGSVLLKVGREEPAVSMDVNGCKIIW--ARHSEVQQANLKTMPEVFENITAGVVLTLS-VHVTIKYRLDI 251 (381)
Q Consensus 176 ~~~l~~-~~~dg~v~i~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~-~~d~~~~~~d~ 251 (381)
|+++++ +..++.+.+|. ++..++.... .................++|+|||+++++. ..+.....|++
T Consensus 198 g~~l~v~~~~~~~v~v~~--------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~ 269 (347)
T 3hfq_A 198 GQYAFLAGELSSQIASLK--------YDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAV 269 (347)
T ss_dssp SSEEEEEETTTTEEEEEE--------EETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEE--------ecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 996655 55678888844 3433454321 111100000000112226789999987544 44566777876
Q ss_pred C
Q psy4650 252 S 252 (381)
Q Consensus 252 ~ 252 (381)
.
T Consensus 270 ~ 270 (347)
T 3hfq_A 270 T 270 (347)
T ss_dssp C
T ss_pred C
Confidence 5
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.50 E-value=2.4e-13 Score=133.86 Aligned_cols=195 Identities=9% Similarity=-0.031 Sum_probs=135.3
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCC----
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN---- 111 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~---- 111 (381)
...+..+++ ..++++. ++++++||+... ....+..|.+.+.+++|+|+|. .|+.+ .++.|.+||+.+
T Consensus 84 v~~~~~spd-~~~~~~~--~~~i~~~d~~~~---~~~~l~~~~~~~~~~~~SpdG~--~la~~-~~~~i~v~~~~~~~~~ 154 (706)
T 2z3z_A 84 SFRTLDAGR-GLVVLFT--QGGLVGFDMLAR---KVTYLFDTNEETASLDFSPVGD--RVAYV-RNHNLYIARGGKLGEG 154 (706)
T ss_dssp CEEEEETTT-TEEEEEE--TTEEEEEETTTT---EEEEEECCTTCCTTCEECTTSS--EEEEE-ETTEEEEEECBCTTSC
T ss_pred ceeEEECCC-CeEEEEE--CCEEEEEECCCC---ceEEccCCcccccCCcCCCCCC--EEEEE-ECCeEEEEecCccccc
Confidence 456777887 6555553 489999998642 2344556778899999999987 67774 689999999998
Q ss_pred -CeEEEEeccCCCC--------------EEEEEEecCCCEEEEEe---------------------------------CC
Q psy4650 112 -KTCVQTLEGHGQN--------------ISAVCFHPELPIVITGS---------------------------------ED 143 (381)
Q Consensus 112 -~~~~~~~~~~~~~--------------v~~~~~~p~~~~l~s~~---------------------------------~d 143 (381)
++.......+... +.++.|+|+|+.|++++ .+
T Consensus 155 ~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 155 MSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp CCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred CCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 7766655444443 48899999999999887 45
Q ss_pred CCEEEEeCCCCeeeEEEe--cCCcceEEEEEcCCCCEEEEEeCCC-----eEEEEecCCCceEEEecCCC-EEEEEecCc
Q psy4650 144 GSVRVWHSGTHRLEISLT--YGLERVWTISSLKGSNNVAIGYDEG-----SVLLKVGREEPAVSMDVNGC-KIIWARHSE 215 (381)
Q Consensus 144 ~~i~vwd~~~~~~~~~~~--~~~~~v~~v~~~~~~~~l~~~~~dg-----~v~i~~~~~~~~~~~d~~~~-~~~~~~~~~ 215 (381)
..|.+||+.+++...... .+...+.+++|+|+|+.+++++.++ .+.+ ||..++ .... ...+
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~----------~d~~~g~~~~~-~~~~ 303 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNA----------YDAETGRFVRT-LFVE 303 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEE----------EETTTCCEEEE-EEEE
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEE----------EECCCCceeeE-EEEc
Confidence 679999999988654432 3556789999999999999887665 5655 787777 3221 1111
Q ss_pred eeecccccCCccccccC--CceEEeeehHHHHHhccCC
Q psy4650 216 VQQANLKTMPEVFENIT--AGVVLTLSVHVTIKYRLDI 251 (381)
Q Consensus 216 ~~~~~~~~~~~~~~~~~--dg~~l~~~~~d~~~~~~d~ 251 (381)
....... ....+.|+| ||.+++++..++...+|..
T Consensus 304 ~~~~~~~-~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~ 340 (706)
T 2z3z_A 304 TDKHYVE-PLHPLTFLPGSNNQFIWQSRRDGWNHLYLY 340 (706)
T ss_dssp ECSSCCC-CCSCCEECTTCSSEEEEEECTTSSCEEEEE
T ss_pred cCCCeEC-ccCCceeecCCCCEEEEEEccCCccEEEEE
Confidence 1110010 011246888 9998888777665555544
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.49 E-value=9.4e-13 Score=114.52 Aligned_cols=186 Identities=11% Similarity=0.083 Sum_probs=124.5
Q ss_pred eeeeecCCCceEEEEEe--cCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEE-EEcCCCeEEEEECCC-C
Q psy4650 37 VDITTNKDMIEYKISYQ--ESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLI-SGADDRLVKIWDYQN-K 112 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~--~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~-s~~~d~~v~vwd~~~-~ 112 (381)
..+.+.+++. +++.++ .++...+|...... .....+..+. .+.++.|+|++. .++ +++.++.+++|++.. .
T Consensus 88 ~~~~~spdg~-~l~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~-~~~~~~~spdg~--~l~~~~~~~~~~~l~~~~~~~ 162 (297)
T 2ojh_A 88 NDHGISPDGA-LYAISDKVEFGKSAIYLLPSTG-GTPRLMTKNL-PSYWHGWSPDGK--SFTYCGIRDQVFDIYSMDIDS 162 (297)
T ss_dssp SCCEECTTSS-EEEEEECTTTSSCEEEEEETTC-CCCEECCSSS-SEEEEEECTTSS--EEEEEEEETTEEEEEEEETTT
T ss_pred cceEECCCCC-EEEEEEeCCCCcceEEEEECCC-CceEEeecCC-CccceEECCCCC--EEEEEECCCCceEEEEEECCC
Confidence 4566777644 666666 33455555442211 2234444443 489999999887 454 788899999998532 2
Q ss_pred eEEEEeccCCCCEEEEEEecCCCEEEEEe-CCCCEEEEeCC-CCeeeEEEecCCcceEEEEEcCCCCEEEEEeCC-----
Q psy4650 113 TCVQTLEGHGQNISAVCFHPELPIVITGS-EDGSVRVWHSG-THRLEISLTYGLERVWTISSLKGSNNVAIGYDE----- 185 (381)
Q Consensus 113 ~~~~~~~~~~~~v~~~~~~p~~~~l~s~~-~d~~i~vwd~~-~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d----- 185 (381)
.....+..|...+.+++|+|++..++.++ .++.+++|++. .+.....+..+...+.++.|+|+|++++.++.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 242 (297)
T 2ojh_A 163 GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFD 242 (297)
T ss_dssp CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCS
T ss_pred CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCc
Confidence 33456667888999999999999877666 58999999986 555666777777889999999999999888765
Q ss_pred ------CeEEEEecCCCceEEEecCCCEE--EEEecCceeecccccCCccccccCCceEEeeehHH
Q psy4650 186 ------GSVLLKVGREEPAVSMDVNGCKI--IWARHSEVQQANLKTMPEVFENITAGVVLTLSVHV 243 (381)
Q Consensus 186 ------g~v~i~~~~~~~~~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d 243 (381)
+.+.+ ||..++.. +..... + ......+.|+|||..++++..+
T Consensus 243 ~~~~~~~~l~~----------~d~~~~~~~~~~~~~~--~----~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 243 HPRDLDVRVQL----------MDMDGGNVETLFDLFG--G----QGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp CCSSEEEEEEE----------EETTSCSCEEEEEEEE--S----TTTSCSCCBCTTSSEEEEEEEC
T ss_pred ccccCceEEEE----------EecCCCCceeeeccCC--C----CcccccceECCCCCEEEEEEec
Confidence 33555 77765532 222111 0 1111125788999998887654
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.47 E-value=7e-13 Score=130.89 Aligned_cols=190 Identities=10% Similarity=-0.004 Sum_probs=129.7
Q ss_pred ceeeeecCCCceEEEEEecC---------CeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEE
Q psy4650 36 KVDITTNKDMIEYKISYQES---------SRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 106 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d---------~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~v 106 (381)
...+..++++ .+++.++.+ +.+++||+.......+....+|...+.+++|+|+|. .|+.++. +.|++
T Consensus 63 v~~~~~SpDg-~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~--~la~~~~-~~i~~ 138 (723)
T 1xfd_A 63 AIRYEISPDR-EYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQ--QLIFIFE-NNIYY 138 (723)
T ss_dssp CSEEEECTTS-SEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTT--CEEEEET-TEEEE
T ss_pred cceEEECCCC-CEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCC--EEEEEEC-CeEEE
Confidence 4567777774 466666553 788899997544333444456666789999999987 5777765 79999
Q ss_pred EECCCCeEEEEeccCCCCE------------------EEEEEecCCCEEEEEeCCC------------------------
Q psy4650 107 WDYQNKTCVQTLEGHGQNI------------------SAVCFHPELPIVITGSEDG------------------------ 144 (381)
Q Consensus 107 wd~~~~~~~~~~~~~~~~v------------------~~~~~~p~~~~l~s~~~d~------------------------ 144 (381)
||..++........+...+ .+++|+|+|+.|++++.|+
T Consensus 139 ~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (723)
T 1xfd_A 139 CAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHY 218 (723)
T ss_dssp ESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEEC
T ss_pred EECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccC
Confidence 9999988766665544333 7899999999998887543
Q ss_pred ----------CEEEEeCCCCeeeEEEecC------CcceEEEEEcCCCCEEEEEeCC----CeEEEEecCCCceEEEecC
Q psy4650 145 ----------SVRVWHSGTHRLEISLTYG------LERVWTISSLKGSNNVAIGYDE----GSVLLKVGREEPAVSMDVN 204 (381)
Q Consensus 145 ----------~i~vwd~~~~~~~~~~~~~------~~~v~~v~~~~~~~~l~~~~~d----g~v~i~~~~~~~~~~~d~~ 204 (381)
.|.+||+.+++....+..+ ...+.++.|+|+|+++++.+.. ..+.+ ||..
T Consensus 219 ~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~----------~d~~ 288 (723)
T 1xfd_A 219 PKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTL----------CDAT 288 (723)
T ss_dssp CBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEE----------EETT
T ss_pred CCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEE----------EeCC
Confidence 7999999988865555543 5678999999999988766533 23444 8887
Q ss_pred CCEEEEEecCceeecccccCCccccccCCceEEeee
Q psy4650 205 GCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLS 240 (381)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~ 240 (381)
++......... ....+........|+|||+.+++.
T Consensus 289 ~g~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 289 TGVCTKKHEDE-SEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp TCCEEEEEEEE-CSSCCCCCCCCCEECTTSCSEEEE
T ss_pred CCcceEEEEec-cCCEEeccCCCceEcCCCCeEEEE
Confidence 76644322111 001111110125789999988765
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.46 E-value=2.5e-12 Score=114.26 Aligned_cols=172 Identities=6% Similarity=0.000 Sum_probs=126.9
Q ss_pred eEEEEEecCCeEEEecCCCccceeeEeec-cccc-cEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccC---
Q psy4650 47 EYKISYQESSRVKAFNPIQVATLILKTLY-GHEK-GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH--- 121 (381)
Q Consensus 47 ~~~~s~~~d~~v~i~~~~~~~~~~~~~l~-~h~~-~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~--- 121 (381)
.++++++.+++|.+||+.. ...+..+. ++.. .+.+++|+|++.. ++++++.++.|.+||..+++.+..+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 78 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEK--MAVDKVITIADAGPTPMVPMVAPGGRI-AYATVNKSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp EEEEEEETTTEEEEEETTT--TEEEEEEECTTCTTCCCCEEECTTSSE-EEEEETTTTEEEEEETTTCCEEEEEECCBTT
T ss_pred cEEEEcCCCCeEEEEECCC--CcEEEEEEcCCCCCCccceEEcCCCCE-EEEEeCCCCeEEEEECCCCCeEeeEEcCCcc
Confidence 4789999999999999864 34445554 2222 4789999998863 5577788899999999999877766532
Q ss_pred --CCCEEEEEEecCCCEEEEEe------------CCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCe
Q psy4650 122 --GQNISAVCFHPELPIVITGS------------EDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGS 187 (381)
Q Consensus 122 --~~~v~~~~~~p~~~~l~s~~------------~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~ 187 (381)
...+.+++|+|++..+++++ .++.|.+||+.+++....+.. ...+.+++|+|+|++++++ ++.
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~ 155 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRD 155 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSS
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCe
Confidence 12567899999999888875 579999999999988877764 3567789999999988877 577
Q ss_pred EEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeeh
Q psy4650 188 VLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSV 241 (381)
Q Consensus 188 v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 241 (381)
+.+ ||..++........... .....++|||..++...
T Consensus 156 i~~----------~d~~~~~~~~~~~~~~~-------~~~~~~s~dg~~l~~~~ 192 (337)
T 1pby_B 156 LHV----------MDPEAGTLVEDKPIQSW-------EAETYAQPDVLAVWNQH 192 (337)
T ss_dssp EEE----------EETTTTEEEEEECSTTT-------TTTTBCCCBCCCCCCCC
T ss_pred EEE----------EECCCCcEeeeeecccc-------CCCceeCCCccEEeeec
Confidence 777 88888877655432210 01135678887766544
No 152
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.45 E-value=1.2e-12 Score=129.69 Aligned_cols=198 Identities=9% Similarity=0.003 Sum_probs=135.7
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
...+.+++++. +++.++. +.|++|++..........+..|...+.+++|+|+|. +|+.++ ++.|.+||+.++...
T Consensus 111 v~~~~~SpDg~-~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~--~la~~~-~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 111 IVDYQWSPDAQ-RLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGG--FVSFIR-GRNLWVIDLASGRQM 185 (741)
T ss_dssp SCCCEECTTSS-EEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSS--EEEEEE-TTEEEEEETTTTEEE
T ss_pred cceeEECCCCC-EEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCC--EEEEEe-CCcEEEEecCCCCEE
Confidence 34666777754 5555554 899999986431003456778889999999999987 677776 569999999998876
Q ss_pred EEeccCCCC----------------EEEEEEecCCCEEEEEeCCC---------------------------------CE
Q psy4650 116 QTLEGHGQN----------------ISAVCFHPELPIVITGSEDG---------------------------------SV 146 (381)
Q Consensus 116 ~~~~~~~~~----------------v~~~~~~p~~~~l~s~~~d~---------------------------------~i 146 (381)
.....+... +.+++|+|+|+.|++++.|+ .|
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 655544432 37899999999999887665 78
Q ss_pred EEEeCCC-CeeeEEEe--cCCcceEEEEEcCCCCEEEEEeC-----CCeEEEEecCCCceEEEecCCCEEEEEecCceee
Q psy4650 147 RVWHSGT-HRLEISLT--YGLERVWTISSLKGSNNVAIGYD-----EGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQ 218 (381)
Q Consensus 147 ~vwd~~~-~~~~~~~~--~~~~~v~~v~~~~~~~~l~~~~~-----dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 218 (381)
.+||+.+ ++...... .+...+.+++| |+|+.|+.++. +..+.+ ||..++.......... .
T Consensus 266 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~----------~d~~~g~~~~~~~~~~-~ 333 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVE----------VTLASNQQRVLAHETS-P 333 (741)
T ss_dssp EEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEE----------EETTTCCEEEEEEEEC-S
T ss_pred EEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEE----------EECCCCceEEEEEcCC-C
Confidence 9999988 87654432 36678999999 99999987764 334444 7877766443322111 0
Q ss_pred cccccCCccccccCCceEEeeehHHHHHhccCC
Q psy4650 219 ANLKTMPEVFENITAGVVLTLSVHVTIKYRLDI 251 (381)
Q Consensus 219 ~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~ 251 (381)
..+... ..+.|+|||++++++..++...+|.+
T Consensus 334 ~~~~~~-~~~~~spdg~~~~~~~~~g~~~l~~~ 365 (741)
T 2ecf_A 334 TWVPLH-NSLRFLDDGSILWSSERTGFQHLYRI 365 (741)
T ss_dssp SCCCCC-SCCEECTTSCEEEEECTTSSCEEEEE
T ss_pred CcCCcC-CceEECCCCeEEEEecCCCccEEEEE
Confidence 000011 12578899998877777665444433
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.44 E-value=2.3e-12 Score=132.41 Aligned_cols=184 Identities=11% Similarity=0.004 Sum_probs=138.1
Q ss_pred ceeeeec-CCCceEEEEEecCCeEEEecCCCccceeeEeeccccc-cEEEEEeeeCCCccEEEEEcCCCeEE-EEECCCC
Q psy4650 36 KVDITTN-KDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEK-GVNCVDYYHGGDKPYLISGADDRLVK-IWDYQNK 112 (381)
Q Consensus 36 ~~~i~~~-~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~-~v~~~~~~~~~~~~~l~s~~~d~~v~-vwd~~~~ 112 (381)
...+.++ +++. .++.++ ++.+.+|+.... ....+..|.+ .+.++.|+ ++. .++.++.+..+. +|+..++
T Consensus 298 v~~~~~S~pdG~-~la~~~-~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~s-dg~--~l~~~s~~~~l~~~~d~~~~ 369 (1045)
T 1k32_A 298 KFAEDFSPLDGD-LIAFVS-RGQAFIQDVSGT---YVLKVPEPLRIRYVRRGGD-TKV--AFIHGTREGDFLGIYDYRTG 369 (1045)
T ss_dssp GGEEEEEECGGG-CEEEEE-TTEEEEECTTSS---BEEECSCCSCEEEEEECSS-SEE--EEEEEETTEEEEEEEETTTC
T ss_pred cceeeecCCCCC-EEEEEE-cCEEEEEcCCCC---ceEEccCCCcceEEeeeEc-CCC--eEEEEECCCceEEEEECCCC
Confidence 3456666 6644 455544 789999998642 2345677887 89999999 776 688888788888 9999887
Q ss_pred eEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCC------
Q psy4650 113 TCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEG------ 186 (381)
Q Consensus 113 ~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg------ 186 (381)
.... +.+|...+.+++|+|+|+.+++++.++.|++||+.+++.......|...+.+++|+|+|++++.++.++
T Consensus 370 ~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~ 448 (1045)
T 1k32_A 370 KAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDG 448 (1045)
T ss_dssp CEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred CceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccC
Confidence 6544 347888999999999999999999999999999999998887778888899999999999998887654
Q ss_pred ----eEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHH
Q psy4650 187 ----SVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTI 245 (381)
Q Consensus 187 ----~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~ 245 (381)
.+++ ||..++. ...+..+. .......|+|||+.+++.+.+..
T Consensus 449 ~~~~~i~l----------~d~~~g~-~~~l~~~~------~~~~~~~~spdG~~l~~~s~~~~ 494 (1045)
T 1k32_A 449 YVMQAIHV----------YDMEGRK-IFAATTEN------SHDYAPAFDADSKNLYYLSYRSL 494 (1045)
T ss_dssp CCEEEEEE----------EETTTTE-EEECSCSS------SBEEEEEECTTSCEEEEEESCCC
T ss_pred CCCCeEEE----------EECCCCc-EEEeeCCC------cccCCceEcCCCCEEEEEecccC
Confidence 6666 7777766 22222110 00111468899998888776443
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.42 E-value=4e-12 Score=113.67 Aligned_cols=192 Identities=8% Similarity=-0.052 Sum_probs=132.0
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeecc-c-----cccEEEEEeeeCCCccEEEEEcCC-------
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYG-H-----EKGVNCVDYYHGGDKPYLISGADD------- 101 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~-h-----~~~v~~~~~~~~~~~~~l~s~~~d------- 101 (381)
.+..+...+++..++++...++.|.+||+.. ......+.. + ...+.+++|+|++. ++++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t--~~~~~~~~~~~~~~~~~~~~~~~~~spdg~--~l~~~~~~~~~~~~~ 119 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT--CKNTFHANLSSVPGEVGRSMYSFAISPDGK--EVYATVNPTQRLNDH 119 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTT--TEEEEEEESCCSTTEEEECSSCEEECTTSS--EEEEEEEEEEECSSC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCC--CcEEEEEEcccccccccccccceEECCCCC--EEEEEcccccccccc
Confidence 3566777777665667777889999999864 333444432 2 23478899999887 67777654
Q ss_pred -----CeEEEEECCCCe---EEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCC---------
Q psy4650 102 -----RLVKIWDYQNKT---CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGL--------- 164 (381)
Q Consensus 102 -----~~v~vwd~~~~~---~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~--------- 164 (381)
+.|.+||+.+++ .+..+.. ...+.+++|+|+|. ++.++ +.|.+||..+++....+..+.
T Consensus 120 ~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 195 (349)
T 1jmx_B 120 YVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAP 195 (349)
T ss_dssp EEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCC
T ss_pred cccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCc
Confidence 899999998843 3334443 34688999999999 55554 349999999988776664331
Q ss_pred -----------------------------------------------------------cceEEEEEcC-CCCEEEEEeC
Q psy4650 165 -----------------------------------------------------------ERVWTISSLK-GSNNVAIGYD 184 (381)
Q Consensus 165 -----------------------------------------------------------~~v~~v~~~~-~~~~l~~~~~ 184 (381)
..+..++++| ++++++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-- 273 (349)
T 1jmx_B 196 DVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-- 273 (349)
T ss_dssp BCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--
T ss_pred cceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--
Confidence 1234566678 88877777
Q ss_pred CCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 185 EGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 185 dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
++.+.+ ||..++..+....... ....++++|||..++++..++....||...
T Consensus 274 ~~~v~~----------~d~~~~~~~~~~~~~~-------~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 274 LNRLAK----------YDLKQRKLIKAANLDH-------TYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp ESEEEE----------EETTTTEEEEEEECSS-------CCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred cCeEEE----------EECccCeEEEEEcCCC-------CccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 667776 8888887665543221 112267889998888877777778888753
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.42 E-value=5.6e-12 Score=112.69 Aligned_cols=141 Identities=7% Similarity=0.007 Sum_probs=103.9
Q ss_pred CceEEEEEecCCeEEEecCCCccceeeEeecccc-ccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCC-
Q psy4650 45 MIEYKISYQESSRVKAFNPIQVATLILKTLYGHE-KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHG- 122 (381)
Q Consensus 45 ~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~-~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~- 122 (381)
...++++++.+++|++||+.. ...+..+..+. ..+..++|+|++.. +++++..++.|.+||..+++....+..+.
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~-~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~ 86 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVAS--DTVYKSCVMPDKFGPGTAMMAPDNRT-AYVLNNHYGDIYGIDLDTCKNTFHANLSSV 86 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTT--TEEEEEEECSSCCSSCEEEECTTSSE-EEEEETTTTEEEEEETTTTEEEEEEESCCS
T ss_pred CCEEEEEeCCCCeEEEEECCC--CcEEEEEecCCCCCCceeEECCCCCE-EEEEeCCCCcEEEEeCCCCcEEEEEEcccc
Confidence 366888999999999999864 34455555433 25788999998862 45677789999999999998877765332
Q ss_pred -----CCEEEEEEecCCCEEEEEeCC------------CCEEEEeCCCCee---eEEEecCCcceEEEEEcCCCCEEEEE
Q psy4650 123 -----QNISAVCFHPELPIVITGSED------------GSVRVWHSGTHRL---EISLTYGLERVWTISSLKGSNNVAIG 182 (381)
Q Consensus 123 -----~~v~~~~~~p~~~~l~s~~~d------------~~i~vwd~~~~~~---~~~~~~~~~~v~~v~~~~~~~~l~~~ 182 (381)
..+.+++|+|+|+.+++++.+ +.|.+||+.+++. +..+.. ...+.+++|+|+|+ +.++
T Consensus 87 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~ 164 (349)
T 1jmx_B 87 PGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVA 164 (349)
T ss_dssp TTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEE
T ss_pred cccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEc
Confidence 236889999999998888755 8999999988543 333433 34688899999999 5555
Q ss_pred eCCCeEEEEe
Q psy4650 183 YDEGSVLLKV 192 (381)
Q Consensus 183 ~~dg~v~i~~ 192 (381)
+. .+.+|+
T Consensus 165 ~~--~i~~~d 172 (349)
T 1jmx_B 165 GP--DIYKMD 172 (349)
T ss_dssp SS--SEEEEC
T ss_pred cC--cEEEEe
Confidence 43 377744
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.41 E-value=6.1e-12 Score=121.06 Aligned_cols=188 Identities=9% Similarity=-0.022 Sum_probs=128.2
Q ss_pred eeeeecCCCceEEEEEec---CCeEEEecCCC--ccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCC
Q psy4650 37 VDITTNKDMIEYKISYQE---SSRVKAFNPIQ--VATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 111 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~---d~~v~i~~~~~--~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~ 111 (381)
..+.++++ .++++++. +...++|.... ..... .+..+ ..+...+|+|+++..++++++.++.. +||+.+
T Consensus 68 ~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~~~--~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~-l~d~~~ 141 (582)
T 3o4h_A 68 LDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGEEQ--RLEAV-KPMRILSGVDTGEAVVFTGATEDRVA-LYALDG 141 (582)
T ss_dssp CEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTCCE--ECTTS-CSBEEEEEEECSSCEEEEEECSSCEE-EEEEET
T ss_pred ccccCCCC--eEEEEeccCCCCcceEEEEEeccCCCccc--cccCC-CCceeeeeCCCCCeEEEEecCCCCce-EEEccC
Confidence 34556666 57776664 44455654422 12221 33222 23446789999886566666666655 999999
Q ss_pred CeEEEEeccCCCCEEEEEEecCCCEEEEEeCC----CCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCC-
Q psy4650 112 KTCVQTLEGHGQNISAVCFHPELPIVITGSED----GSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEG- 186 (381)
Q Consensus 112 ~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d----~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg- 186 (381)
++.......+. .+++|+|+|+.+++++.+ +.|++||+.+++.. .+..+...+..++|+|+|+.++++..+|
T Consensus 142 g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~ 217 (582)
T 3o4h_A 142 GGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETARE 217 (582)
T ss_dssp TEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSC
T ss_pred CcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCe
Confidence 87665554333 889999999999988776 78999999988754 5677888899999999999999888888
Q ss_pred -eEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCcccc--------ccCCceEEeeehHHHHHhccCC
Q psy4650 187 -SVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFE--------NITAGVVLTLSVHVTIKYRLDI 251 (381)
Q Consensus 187 -~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~dg~~l~~~~~d~~~~~~d~ 251 (381)
.+.+ ||..++... ...... .... ... |+|||..++++..++....|++
T Consensus 218 ~~i~~----------~d~~~~~~~-~~~~~~--~~~~----~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 218 ARLVT----------VDPRDGSVE-DLELPS--KDFS----SYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEE----------ECTTTCCEE-ECCCSC--SHHH----HHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred eEEEE----------EcCCCCcEE-EccCCC--cChh----hhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 5555 888777655 222111 0111 134 8899988888888887777876
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.40 E-value=2.7e-12 Score=123.50 Aligned_cols=142 Identities=10% Similarity=-0.022 Sum_probs=108.3
Q ss_pred ecCCCce-EEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCC----CeEEEEECCCCeEE
Q psy4650 41 TNKDMIE-YKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADD----RLVKIWDYQNKTCV 115 (381)
Q Consensus 41 ~~~~~~~-~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d----~~v~vwd~~~~~~~ 115 (381)
..+++.. ++++++.+ .+.+||+.... ...+..+.. .+++|+|+|. ++++++.+ +.|.+||+.+++..
T Consensus 117 ~s~dg~~~~~~s~~~~-~~~l~d~~~g~---~~~l~~~~~--~~~~~spDG~--~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 117 GVDTGEAVVFTGATED-RVALYALDGGG---LRELARLPG--FGFVSDIRGD--LIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp EEECSSCEEEEEECSS-CEEEEEEETTE---EEEEEEESS--CEEEEEEETT--EEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred eCCCCCeEEEEecCCC-CceEEEccCCc---EEEeecCCC--ceEEECCCCC--EEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 3344333 44555554 45599986422 233333333 7899999988 78877766 78999999888754
Q ss_pred EEeccCCCCEEEEEEecCCCEEEEEeCCC--CEEEEeCCCCeeeEEEecCCcceEEEE--------EcCCCCEEEEEeCC
Q psy4650 116 QTLEGHGQNISAVCFHPELPIVITGSEDG--SVRVWHSGTHRLEISLTYGLERVWTIS--------SLKGSNNVAIGYDE 185 (381)
Q Consensus 116 ~~~~~~~~~v~~~~~~p~~~~l~s~~~d~--~i~vwd~~~~~~~~~~~~~~~~v~~v~--------~~~~~~~l~~~~~d 185 (381)
.+.+|.+.+..++|+|+|+.++++..++ .|.+||+.+++.. .+..+...+..+. |+|+|.++++++.+
T Consensus 189 -~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 266 (582)
T 3o4h_A 189 -VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARRE 266 (582)
T ss_dssp -EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEET
T ss_pred -EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcC
Confidence 5677888899999999999999888888 8999999998877 6666766666667 99999999999999
Q ss_pred CeEEEEe
Q psy4650 186 GSVLLKV 192 (381)
Q Consensus 186 g~v~i~~ 192 (381)
|.+++|.
T Consensus 267 g~~~l~~ 273 (582)
T 3o4h_A 267 GRSAVFI 273 (582)
T ss_dssp TEEEEEE
T ss_pred CcEEEEE
Confidence 9999944
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.38 E-value=8.4e-11 Score=105.93 Aligned_cols=164 Identities=9% Similarity=0.021 Sum_probs=114.3
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccc----e-e------eEeeccccccEEEEEeeeCCCccEEE-EEcCCC
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVAT----L-I------LKTLYGHEKGVNCVDYYHGGDKPYLI-SGADDR 102 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~----~-~------~~~l~~h~~~v~~~~~~~~~~~~~l~-s~~~d~ 102 (381)
++..+...+++..++++...++.+.+|++..... . + ......+......++|+|++. +++ ++..++
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~--~l~v~~~~~~ 233 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK--FAYLINEIGG 233 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS--EEEEEETTTC
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC--EEEEEcCCCC
Confidence 3466788888666667777789999998754322 1 1 111223445678999999887 454 444799
Q ss_pred eEEEEECCCCeE--EEEe---ccCCCCEEEEEEecCCCEEEEEeC--CCCEEEEeCC--CCe--eeEEEecCCcceEEEE
Q psy4650 103 LVKIWDYQNKTC--VQTL---EGHGQNISAVCFHPELPIVITGSE--DGSVRVWHSG--THR--LEISLTYGLERVWTIS 171 (381)
Q Consensus 103 ~v~vwd~~~~~~--~~~~---~~~~~~v~~~~~~p~~~~l~s~~~--d~~i~vwd~~--~~~--~~~~~~~~~~~v~~v~ 171 (381)
.|.+|++.++.. +..+ ..+......++|+|+|++++.++. ++.|.+|++. +++ .+..+.. ...+.+++
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~ 312 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFI 312 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEE
T ss_pred eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEE
Confidence 999999987754 2333 233345789999999998866655 4899999996 454 3444444 45678999
Q ss_pred EcCCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCEEE
Q psy4650 172 SLKGSNNVAIGY-DEGSVLLKVGREEPAVSMDVNGCKII 209 (381)
Q Consensus 172 ~~~~~~~l~~~~-~dg~v~i~~~~~~~~~~~d~~~~~~~ 209 (381)
|+|+|++|++++ .++.+.+|. +|..++.+.
T Consensus 313 ~spdg~~l~~~~~~~~~v~v~~--------~d~~~g~~~ 343 (361)
T 3scy_A 313 ITPNGKYLLVACRDTNVIQIFE--------RDQATGLLT 343 (361)
T ss_dssp ECTTSCEEEEEETTTTEEEEEE--------ECTTTCCEE
T ss_pred ECCCCCEEEEEECCCCCEEEEE--------EECCCCcEe
Confidence 999999888887 678888855 666666543
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.38 E-value=4.6e-11 Score=107.62 Aligned_cols=197 Identities=11% Similarity=0.068 Sum_probs=121.7
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccc--eeeE--eecc--------ccccEEEEEeeeCCCccEEEEEcCCC
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVAT--LILK--TLYG--------HEKGVNCVDYYHGGDKPYLISGADDR 102 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~--~~~~--~l~~--------h~~~v~~~~~~~~~~~~~l~s~~~d~ 102 (381)
.++.+.. ++..++++...++.+.+|++..... .... ...+ +...+.+++|+|++.. +++++..++
T Consensus 101 ~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~ 177 (361)
T 3scy_A 101 DPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKY-LLADDLGTD 177 (361)
T ss_dssp CEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSE-EEEEETTTT
T ss_pred CcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCE-EEEEeCCCC
Confidence 3444544 3344445555788999999853211 1111 1111 2334688999998873 445666789
Q ss_pred eEEEEECCCCe-------E------EEEeccCCCCEEEEEEecCCCEEEEEe-CCCCEEEEeCCCCee--eEEEec---C
Q psy4650 103 LVKIWDYQNKT-------C------VQTLEGHGQNISAVCFHPELPIVITGS-EDGSVRVWHSGTHRL--EISLTY---G 163 (381)
Q Consensus 103 ~v~vwd~~~~~-------~------~~~~~~~~~~v~~~~~~p~~~~l~s~~-~d~~i~vwd~~~~~~--~~~~~~---~ 163 (381)
.|.+|++.... . ......+......++|+|+|++++.++ .++.|.+||+.++.. +..+.. +
T Consensus 178 ~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~ 257 (361)
T 3scy_A 178 QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVN 257 (361)
T ss_dssp EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSC
T ss_pred EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCC
Confidence 99999887533 1 111223445678999999999877776 589999999987764 223322 2
Q ss_pred CcceEEEEEcCCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCEE--EEEecCceeecccccCCccccccCCceEEee
Q psy4650 164 LERVWTISSLKGSNNVAIGYD--EGSVLLKVGREEPAVSMDVNGCKI--IWARHSEVQQANLKTMPEVFENITAGVVLTL 239 (381)
Q Consensus 164 ~~~v~~v~~~~~~~~l~~~~~--dg~v~i~~~~~~~~~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~ 239 (381)
......++|+|+|++++++.. ++.+.+|. ++..++.. +..... ......++|+|||+++++
T Consensus 258 ~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~--------~~~~~g~~~~~~~~~~-------g~~~~~~~~spdg~~l~~ 322 (361)
T 3scy_A 258 AQGSGDIHLSPDGKYLYASNRLKADGVAIFK--------VDETNGTLTKVGYQLT-------GIHPRNFIITPNGKYLLV 322 (361)
T ss_dssp CCCEEEEEECTTSSEEEEEECSSSCEEEEEE--------ECTTTCCEEEEEEEEC-------SSCCCEEEECTTSCEEEE
T ss_pred CCCcccEEECCCCCEEEEECCCCCCEEEEEE--------EcCCCCcEEEeeEecC-------CCCCceEEECCCCCEEEE
Confidence 345689999999998876665 47888844 33233432 221111 122233688999998887
Q ss_pred ehH-HHHHhcc
Q psy4650 240 SVH-VTIKYRL 249 (381)
Q Consensus 240 ~~~-d~~~~~~ 249 (381)
+.. ++....|
T Consensus 323 ~~~~~~~v~v~ 333 (361)
T 3scy_A 323 ACRDTNVIQIF 333 (361)
T ss_dssp EETTTTEEEEE
T ss_pred EECCCCCEEEE
Confidence 763 4445553
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.36 E-value=1.6e-12 Score=128.33 Aligned_cols=142 Identities=10% Similarity=0.011 Sum_probs=102.8
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccc---cEEEEEeeeCCCccEEEEEcC---------CCe
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEK---GVNCVDYYHGGDKPYLISGAD---------DRL 103 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~---~v~~~~~~~~~~~~~l~s~~~---------d~~ 103 (381)
...+.+.+++ .+++++ .|+++++|++.... ....+.+|.. .+.+++|||+|. +|+.++. ++.
T Consensus 18 ~~~~~~s~dg-~~~~~~-~d~~i~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~SpDg~--~la~~~~~~~~~~~s~~~~ 91 (719)
T 1z68_A 18 TFFPNWISGQ-EYLHQS-ADNNIVLYNIETGQ--SYTILSNRTMKSVNASNYGLSPDRQ--FVYLESDYSKLWRYSYTAT 91 (719)
T ss_dssp CCCCEESSSS-EEEEEC-TTSCEEEEESSSCC--EEEEECHHHHHTTTCSEEEECTTSS--EEEEEEEEEECSSSCEEEE
T ss_pred CCccEECCCC-eEEEEc-CCCCEEEEEcCCCc--EEEEEccccccccceeeEEECCCCC--eEEEEecCceeEEeecceE
Confidence 3466677775 566654 68999999987533 3344445544 489999999988 6777765 789
Q ss_pred EEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEE-ecCCcce---------------
Q psy4650 104 VKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL-TYGLERV--------------- 167 (381)
Q Consensus 104 v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~-~~~~~~v--------------- 167 (381)
|++||+.+++.+.... ....+..++|+|+|+.++.+. ++.|++||+.++...... .++...+
T Consensus 92 i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~ 169 (719)
T 1z68_A 92 YYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLA 169 (719)
T ss_dssp EEEEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTC
T ss_pred EEEEECCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeeccc
Confidence 9999999987621111 124688999999999999886 789999999888765432 2222222
Q ss_pred --EEEEEcCCCCEEEEEeCC
Q psy4650 168 --WTISSLKGSNNVAIGYDE 185 (381)
Q Consensus 168 --~~v~~~~~~~~l~~~~~d 185 (381)
.++.|+|+|+.|+.++.|
T Consensus 170 ~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 170 TKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp SSCCEEECTTSSEEEEEEEE
T ss_pred CcccEEECCCCCEEEEEEEC
Confidence 489999999999998765
No 161
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.36 E-value=1.4e-10 Score=103.82 Aligned_cols=155 Identities=9% Similarity=0.018 Sum_probs=109.3
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCC-ccceeeEeecccc-ccEEEEEeeeCCCccEEEEEcCCCeEEEEECCC--
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQ-VATLILKTLYGHE-KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN-- 111 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~-~~~~~~~~l~~h~-~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~-- 111 (381)
+..+...+++. ++++...++.+.+|++.. ........+..+. .....++|+|++.. +++++..++.+.+|++..
T Consensus 143 ~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~-l~v~~~~~~~v~v~~~~~~~ 220 (347)
T 3hfq_A 143 IHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQY-AFLAGELSSQIASLKYDTQT 220 (347)
T ss_dssp EEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSE-EEEEETTTTEEEEEEEETTT
T ss_pred ceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCE-EEEEeCCCCEEEEEEecCCC
Confidence 55677788766 777888889999999862 1112222222322 36788999998873 455667899999999874
Q ss_pred CeE--EEEeccCC------CCEEEEEEecCCCEE-EEEeCCCCEEEEeCCC-C--eeeEEEecCCcceEEEEEcCCCCEE
Q psy4650 112 KTC--VQTLEGHG------QNISAVCFHPELPIV-ITGSEDGSVRVWHSGT-H--RLEISLTYGLERVWTISSLKGSNNV 179 (381)
Q Consensus 112 ~~~--~~~~~~~~------~~v~~~~~~p~~~~l-~s~~~d~~i~vwd~~~-~--~~~~~~~~~~~~v~~v~~~~~~~~l 179 (381)
+.. ...+.... ..+..++|+|+|+++ +++..++.|.+||+.. + +.+..+..+...+..++|+|+|++|
T Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l 300 (347)
T 3hfq_A 221 GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFV 300 (347)
T ss_dssp TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEE
T ss_pred CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEE
Confidence 542 23333222 348899999999976 5566789999999972 2 4455566556678899999999988
Q ss_pred EEEeC-CCeEEEEe
Q psy4650 180 AIGYD-EGSVLLKV 192 (381)
Q Consensus 180 ~~~~~-dg~v~i~~ 192 (381)
++++. ++.+.+|.
T Consensus 301 ~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 301 VVVNQNTDNATLYA 314 (347)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEEcCCCcEEEEE
Confidence 88775 48888853
No 162
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.35 E-value=2.3e-11 Score=124.94 Aligned_cols=147 Identities=7% Similarity=-0.059 Sum_probs=120.6
Q ss_pred eeeecCCCceEEEEEecCCeEE-EecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 38 DITTNKDMIEYKISYQESSRVK-AFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 38 ~i~~~~~~~~~~~s~~~d~~v~-i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
.+.+. + +..++.++.++.+. +|++... ....+.+|...+.+++|+|++. +|++++.++.|++||+.+++...
T Consensus 342 ~~~~s-d-g~~l~~~s~~~~l~~~~d~~~~---~~~~l~~~~~~~~~~~~SpDG~--~la~~~~~~~v~~~d~~tg~~~~ 414 (1045)
T 1k32_A 342 RRGGD-T-KVAFIHGTREGDFLGIYDYRTG---KAEKFEENLGNVFAMGVDRNGK--FAVVANDRFEIMTVDLETGKPTV 414 (1045)
T ss_dssp EECSS-S-EEEEEEEETTEEEEEEEETTTC---CEEECCCCCCSEEEEEECTTSS--EEEEEETTSEEEEEETTTCCEEE
T ss_pred eeeEc-C-CCeEEEEECCCceEEEEECCCC---CceEecCCccceeeeEECCCCC--EEEEECCCCeEEEEECCCCceEE
Confidence 34455 4 45677777777888 8887532 2344558889999999999887 79999999999999999998888
Q ss_pred EeccCCCCEEEEEEecCCCEEEEEeCCC----------CEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCC
Q psy4650 117 TLEGHGQNISAVCFHPELPIVITGSEDG----------SVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEG 186 (381)
Q Consensus 117 ~~~~~~~~v~~~~~~p~~~~l~s~~~d~----------~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg 186 (381)
.+.+|.+.+.+++|+|+|+++++++.++ .|++||+.+++ ...+..+...+.++.|+|+|+.++.++.++
T Consensus 415 ~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 415 IERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp EEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred eccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEeccc
Confidence 7878999999999999999988877644 89999999987 666777878899999999999999999877
Q ss_pred eEEEEe
Q psy4650 187 SVLLKV 192 (381)
Q Consensus 187 ~v~i~~ 192 (381)
....|.
T Consensus 494 ~~~~~~ 499 (1045)
T 1k32_A 494 LDPSPD 499 (1045)
T ss_dssp CCCEEC
T ss_pred CCcCcc
Confidence 766654
No 163
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.34 E-value=1.2e-11 Score=121.77 Aligned_cols=183 Identities=15% Similarity=0.093 Sum_probs=121.0
Q ss_pred cCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCC-----eEEEEECCCC-eEEEEecc-CCC---
Q psy4650 54 ESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDR-----LVKIWDYQNK-TCVQTLEG-HGQ--- 123 (381)
Q Consensus 54 ~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~-----~v~vwd~~~~-~~~~~~~~-~~~--- 123 (381)
.+..+++||+.......+....+|...+.++.|+|++. .|++++.++ .|.+||..++ ........ +..
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~--~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDEN--ILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVE 310 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSS--EEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCC--EEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence 44689999986533222222235778899999999887 677776665 9999999998 43333322 222
Q ss_pred CEEEEEEec--CCCEEEEEeCCCCEEEEeCC-CCeeeEEEecCCcceEE-EEEcCCCCEEEEEeCC-C--eEEEEecCCC
Q psy4650 124 NISAVCFHP--ELPIVITGSEDGSVRVWHSG-THRLEISLTYGLERVWT-ISSLKGSNNVAIGYDE-G--SVLLKVGREE 196 (381)
Q Consensus 124 ~v~~~~~~p--~~~~l~s~~~d~~i~vwd~~-~~~~~~~~~~~~~~v~~-v~~~~~~~~l~~~~~d-g--~v~i~~~~~~ 196 (381)
.+.+++|+| +|+++++++.|+.+++|++. ++.....+..+...+.. +.|+|+|+.++.++.+ + ...+|.
T Consensus 311 ~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~---- 386 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYC---- 386 (706)
T ss_dssp CCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEE----
T ss_pred ccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEE----
Confidence 246789999 99999999999999999886 66667777777777876 7999999987766554 3 244433
Q ss_pred ceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHH----HHhccCCCcC
Q psy4650 197 PAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVT----IKYRLDISDS 254 (381)
Q Consensus 197 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~----~~~~~d~~~~ 254 (381)
||..++... .+.. ..+.. .+.|+|||+.+++..... ..+.|++...
T Consensus 387 ----~d~~~~~~~-~l~~------~~~~~-~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 387 ----IDIKGGKTK-DLTP------ESGMH-RTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp ----EETTCCCCE-ESCC------SSSEE-EEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred ----EEcCCCCce-eccC------CCceE-EEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 666555421 1111 01111 257889998887664332 3566776543
No 164
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.34 E-value=2.3e-14 Score=131.51 Aligned_cols=110 Identities=25% Similarity=0.407 Sum_probs=98.9
Q ss_pred HHHhccCCCcChhHHHHHHHHHhhhhhhccccceeeEEEecccCCcccccccChHHHHHHHHHHhhhhhhhhHhhhcccc
Q psy4650 244 TIKYRLDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPCMHVLSTLQ 323 (381)
Q Consensus 244 ~~~~~~d~~~~~~~~~~l~~~~e~ak~~lS~~~~~~i~~~~l~~g~~~~~~itr~~fe~l~~~l~~~~~~~~~~~Ls~~~ 323 (381)
...+..++..+++.+.+|+.++|++|+.||......+.++.+++|.++...++|++|++++.+++.++.++++++|...
T Consensus 267 ~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~- 345 (404)
T 3i33_A 267 KRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDA- 345 (404)
T ss_dssp HHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHH-
T ss_pred HHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 4455667777889999999999999999999999999999999999999999999999999999999999999999873
Q ss_pred ceeeEeeccccCcceEEeecHHHHHHHHHHHHH
Q psy4650 324 SSNVFVESLYDGLDFHHNVSRARFESLIGGLLT 356 (381)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 356 (381)
.+....+..++++||+.+.|.+++++++.|+
T Consensus 346 --~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~ 376 (404)
T 3i33_A 346 --KLDKGQIQEIVLVGGSTRIPKIQKLLQDFFN 376 (404)
T ss_dssp --TCCGGGCCEEEEESGGGGCHHHHHHHHHHTT
T ss_pred --CCCHhhCCEEEEECCccccHHHHHHHHHHcC
Confidence 4445667788899999999999999999993
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.33 E-value=3.7e-11 Score=108.58 Aligned_cols=205 Identities=7% Similarity=-0.023 Sum_probs=126.9
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCC-CccceeeEeeccccccEEEEEeeeCCCccEEEEEc-------------C
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPI-QVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGA-------------D 100 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~-~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~-------------~ 100 (381)
.+..+..++++ .++++++.+ .+.+|++. ......+.....+ +...+++|+|++..-++++++ .
T Consensus 41 ~~~~~a~spdg-~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 41 PISWMTFDHER-KNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp CCSEEEECTTS-SEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCcEEEECCCC-CEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 35567677764 467777777 99999985 2211111111111 234568899987621344553 6
Q ss_pred CCeEEEEECC-CCeEEEEec----cCCCCEEEEEEecCCCEEEEEeC-CCCEEEEeCC-CCeee--EEEec--CCcceEE
Q psy4650 101 DRLVKIWDYQ-NKTCVQTLE----GHGQNISAVCFHPELPIVITGSE-DGSVRVWHSG-THRLE--ISLTY--GLERVWT 169 (381)
Q Consensus 101 d~~v~vwd~~-~~~~~~~~~----~~~~~v~~~~~~p~~~~l~s~~~-d~~i~vwd~~-~~~~~--~~~~~--~~~~v~~ 169 (381)
++++.+|++. .+.....+. .+...+.+++|+|+|++++++.. ++.|.+||+. +|+.. ..+.. +...+..
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 8999999997 455443333 24567899999999998877654 6799999998 77653 23332 3567899
Q ss_pred EEEcCCCCEEEEEeC-CCeEEEEecCCCceEEEecCCCEEEE---EecCceeeccccc---------CCcccc-ccCCce
Q psy4650 170 ISSLKGSNNVAIGYD-EGSVLLKVGREEPAVSMDVNGCKIIW---ARHSEVQQANLKT---------MPEVFE-NITAGV 235 (381)
Q Consensus 170 v~~~~~~~~l~~~~~-dg~v~i~~~~~~~~~~~d~~~~~~~~---~~~~~~~~~~~~~---------~~~~~~-~~~dg~ 235 (381)
++|+|+|+++++++. ++.+.+|. +|..++.... ....- .....+ ....++ ++|||+
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~--------~~~~~g~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~i~~~spdG~ 267 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYV--------IDPATHMPVYTHHSFPLI--PPGIPDRDPETGKGLYRADVCALTFSGK 267 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEE--------ECTTTCCEEEEEEEEESS--CTTCCCBCTTTSSBSEEEEEEEECTTSS
T ss_pred eEECCCCCEEEEEECCCCeEEEEE--------EeCCCCcEEEccceEEcC--CCCcCCcccccccccccccEEEECCCCC
Confidence 999999998887764 68888854 4444454321 11100 000001 122267 899999
Q ss_pred EEeeehHHH------HHhccCCC
Q psy4650 236 VLTLSVHVT------IKYRLDIS 252 (381)
Q Consensus 236 ~l~~~~~d~------~~~~~d~~ 252 (381)
+++++.... ....|++.
T Consensus 268 ~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 268 YMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEEEEEEESSTTSCCEEEEEEEC
T ss_pred EEEEECCCCCCCCCCeEEEEEEC
Confidence 887665432 45566653
No 166
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.30 E-value=3.8e-14 Score=129.68 Aligned_cols=110 Identities=25% Similarity=0.376 Sum_probs=98.2
Q ss_pred HHHhccCCCcChhHHHHHHHHHhhhhhhccccceeeEEEecccCCcccccccChHHHHHHHHHHhhhhhhhhHhhhcccc
Q psy4650 244 TIKYRLDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPCMHVLSTLQ 323 (381)
Q Consensus 244 ~~~~~~d~~~~~~~~~~l~~~~e~ak~~lS~~~~~~i~~~~l~~g~~~~~~itr~~fe~l~~~l~~~~~~~~~~~Ls~~~ 323 (381)
...+..++..+.+.+.+++.++|++|+.|+......+.++.+++|.++...++|++|++++.+++.++.+.++++|...
T Consensus 259 ~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~- 337 (394)
T 3qfu_A 259 KKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDS- 337 (394)
T ss_dssp HHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHHH-
T ss_pred HHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 3445667777888999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred ceeeEeeccccCcceEEeecHHHHHHHHHHHHH
Q psy4650 324 SSNVFVESLYDGLDFHHNVSRARFESLIGGLLT 356 (381)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 356 (381)
.+....+..++++||+.+.|.+++++++.|+
T Consensus 338 --~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~ 368 (394)
T 3qfu_A 338 --GLEKKDVDDIVLVGGSTRIPKVQQLLESYFD 368 (394)
T ss_dssp --TCCGGGCCEEEEESGGGGSHHHHHHHHHHTT
T ss_pred --CCCHHHCCEEEEECCccccHHHHHHHHHHcC
Confidence 4445567788899999999999999999993
No 167
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.29 E-value=1.3e-10 Score=100.52 Aligned_cols=181 Identities=9% Similarity=0.026 Sum_probs=135.8
Q ss_pred ceEEEEEecCCeEEEecCCCccceeeEeecccc-ccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCC-C
Q psy4650 46 IEYKISYQESSRVKAFNPIQVATLILKTLYGHE-KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHG-Q 123 (381)
Q Consensus 46 ~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~-~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~-~ 123 (381)
..++++++.++.|.+||..+ ...+.++..+. ..+.++.++|+|+ +++ +.++.|..||. +++.+..+..+. .
T Consensus 5 ~~~lv~~~~~~~v~~~d~~t--G~~~w~~~~~~~~~~~~~~~~pdG~--ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~ 77 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDT--KEIVWEYPLEKGWECNSVAATKAGE--ILF--SYSKGAKMITR-DGRELWNIAAPAGC 77 (276)
T ss_dssp CEEEEECTTCSEEEEEETTT--TEEEEEEECCTTCCCCEEEECTTSC--EEE--ECBSEEEEECT-TSCEEEEEECCTTC
T ss_pred CcEEEeeCCCCEEEEEECCC--CeEEEEeCCCccCCCcCeEECCCCC--EEE--eCCCCEEEECC-CCCEEEEEcCCCCc
Confidence 57899999999999999864 55667777765 4788999999886 666 45788999999 788888888653 4
Q ss_pred CEEEEEEecCCCEEEEEeC-CCCEEEEeCCCCeeeEEEecC------CcceEEEEEcCCCCEEEEEeCCCeEEEEecCCC
Q psy4650 124 NISAVCFHPELPIVITGSE-DGSVRVWHSGTHRLEISLTYG------LERVWTISSLKGSNNVAIGYDEGSVLLKVGREE 196 (381)
Q Consensus 124 ~v~~~~~~p~~~~l~s~~~-d~~i~vwd~~~~~~~~~~~~~------~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~ 196 (381)
.+.++.+.|+|..+++.+. ++.+..+|. +|+.+..+... ......+...++|.++++.+.++.+..
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~------ 150 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVRE------ 150 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEE------
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEE------
Confidence 7889999999999998877 777888886 67777766522 123445677889999998888888888
Q ss_pred ceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCC
Q psy4650 197 PAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 197 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~ 252 (381)
||.. |+.+|......... + ....++|..++......+...++..
T Consensus 151 ----~d~~-G~~~w~~~~~~~~~---~----~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 151 ----IAPN-GQLLNSVKLSGTPF---S----SAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp ----ECTT-SCEEEEEECSSCCC---E----EEECTTSCEEEECBTTSEEEEECTT
T ss_pred ----ECCC-CCEEEEEECCCCcc---c----eeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 9987 88999876542111 1 2334677777777666556566654
No 168
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.27 E-value=3.6e-10 Score=102.06 Aligned_cols=201 Identities=7% Similarity=-0.028 Sum_probs=125.9
Q ss_pred ceeeeecCCCce-EEEEEe-------------cCCeEEEecCCCccceeeEeec----cccccEEEEEeeeCCCccEEEE
Q psy4650 36 KVDITTNKDMIE-YKISYQ-------------ESSRVKAFNPIQVATLILKTLY----GHEKGVNCVDYYHGGDKPYLIS 97 (381)
Q Consensus 36 ~~~i~~~~~~~~-~~~s~~-------------~d~~v~i~~~~~~~~~~~~~l~----~h~~~v~~~~~~~~~~~~~l~s 97 (381)
+..+...+++.. ++++++ .++++.+|++... ......+. .+...+.+++|+|+|. ++++
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~spdG~--~l~~ 161 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET-GKLEKNVQNYEYQENTGIHGMVFDPTET--YLYS 161 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT-CCEEEEEEEEECCTTCCEEEEEECTTSS--EEEE
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCC-CcCcceEeeEEeCCCCcceEEEECCCCC--EEEE
Confidence 344666776553 455553 6889999998531 12222222 3556899999999887 5555
Q ss_pred E-cCCCeEEEEECC-CCeEE--EEec--cCCCCEEEEEEecCCCEEEEEeC-CCCEEEEeCC--CCeeeE---EEec---
Q psy4650 98 G-ADDRLVKIWDYQ-NKTCV--QTLE--GHGQNISAVCFHPELPIVITGSE-DGSVRVWHSG--THRLEI---SLTY--- 162 (381)
Q Consensus 98 ~-~~d~~v~vwd~~-~~~~~--~~~~--~~~~~v~~~~~~p~~~~l~s~~~-d~~i~vwd~~--~~~~~~---~~~~--- 162 (381)
+ ..++.|.+|++. +++.. ..+. .|...+..++|+|+|+.++.++. ++.+.+|++. +|+... .+..
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 4 457899999998 67542 3343 24567899999999998887765 7899999765 565432 2221
Q ss_pred ----CCc------ceEEEE-EcCCCCEEEEEeCCC------eEEEEecCCCceEEEecC-CCEEEEEecCceeecccccC
Q psy4650 163 ----GLE------RVWTIS-SLKGSNNVAIGYDEG------SVLLKVGREEPAVSMDVN-GCKIIWARHSEVQQANLKTM 224 (381)
Q Consensus 163 ----~~~------~v~~v~-~~~~~~~l~~~~~dg------~v~i~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~~~~ 224 (381)
+.. .+..++ |+|+|++|+++..+. .+.+ |+.. ++.+...... .......
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v----------~~~~~~g~~~~~~~~---~~~~~~~ 308 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAG----------FKLRDCGSIEKQLFL---SPTPTSG 308 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEE----------EEECTTSCEEEEEEE---EECSSCC
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEE----------EEECCCCCEEEeeee---eecCCCC
Confidence 111 588999 999999887765432 6777 5553 3443221100 0001111
Q ss_pred CccccccC---CceEEeeehHH-HHHhccCCC
Q psy4650 225 PEVFENIT---AGVVLTLSVHV-TIKYRLDIS 252 (381)
Q Consensus 225 ~~~~~~~~---dg~~l~~~~~d-~~~~~~d~~ 252 (381)
...++++| ||++++++..+ +....|++.
T Consensus 309 ~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 309 GHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp TTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred cccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 22357788 89999888764 566666654
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.27 E-value=9.1e-11 Score=114.56 Aligned_cols=194 Identities=10% Similarity=-0.034 Sum_probs=125.6
Q ss_pred CCCce-EEEEEecCCeEEEecCCCccc-eeeEeecc-----ccccEEEEEeeeCCCccEEEEEcCC----------CeEE
Q psy4650 43 KDMIE-YKISYQESSRVKAFNPIQVAT-LILKTLYG-----HEKGVNCVDYYHGGDKPYLISGADD----------RLVK 105 (381)
Q Consensus 43 ~~~~~-~~~s~~~d~~v~i~~~~~~~~-~~~~~l~~-----h~~~v~~~~~~~~~~~~~l~s~~~d----------~~v~ 105 (381)
|++.. +.++...+..|.+++... .. .....+.. |...+.+++|+|+|. .|+.++.+ ..|.
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~-~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~--~l~~~~~~~~~~~~~~~~~~i~ 164 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDA-PGGAVPRPLTPVSAVGGGLRWADPVLLPERG--EVWCMAEEFTGEGPSDVRRFLA 164 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTS-TTCCCCEECSCCCCSTTCEEEEEEEEETTTT--EEEEEEEEECSSSTTCEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCC-CCCCCCEeccCCccCCCCccccCcEECCCCC--EEEEEEecccCCCCCCceeEEE
Confidence 66555 444544466777777640 01 22344555 677899999999987 68777766 5899
Q ss_pred EEECCC------CeEEEEec-cCCCCEEEEEEecCCCEEEEEeCC--------CCEEEEeCC-CC---eeeEEEecCCcc
Q psy4650 106 IWDYQN------KTCVQTLE-GHGQNISAVCFHPELPIVITGSED--------GSVRVWHSG-TH---RLEISLTYGLER 166 (381)
Q Consensus 106 vwd~~~------~~~~~~~~-~~~~~v~~~~~~p~~~~l~s~~~d--------~~i~vwd~~-~~---~~~~~~~~~~~~ 166 (381)
+||+.+ +.. ..+. .+...+..++|+|+|+.|+.++.+ ..|.+||+. +| ........+...
T Consensus 165 ~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~ 243 (662)
T 3azo_A 165 AVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEA 243 (662)
T ss_dssp EEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBC
T ss_pred EEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCce
Confidence 999988 554 3444 555678889999999999877754 379999998 57 444444455788
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecc--cccCCccccccCCceEEeeehHHH
Q psy4650 167 VWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQAN--LKTMPEVFENITAGVVLTLSVHVT 244 (381)
Q Consensus 167 v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dg~~l~~~~~d~ 244 (381)
+..+.|+|+|++++++..+|...+|. ||..++....-...+..... ...-...+.++|++.+++++.. +
T Consensus 244 ~~~~~~spdg~l~~~~~~~~~~~l~~--------~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~ 314 (662)
T 3azo_A 244 IAQAEWAPDGSLIVATDRTGWWNLHR--------VDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G 314 (662)
T ss_dssp EEEEEECTTSCEEEEECTTSSCEEEE--------ECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S
T ss_pred EcceEECCCCeEEEEECCCCCeEEEE--------EECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C
Confidence 99999999999888888888555543 66655543221111100000 0000011466778888887766 5
Q ss_pred HHhcc
Q psy4650 245 IKYRL 249 (381)
Q Consensus 245 ~~~~~ 249 (381)
...+|
T Consensus 315 ~~~l~ 319 (662)
T 3azo_A 315 AAVLG 319 (662)
T ss_dssp SCEEE
T ss_pred ccEEE
Confidence 55555
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.23 E-value=4.6e-10 Score=99.87 Aligned_cols=206 Identities=14% Similarity=0.133 Sum_probs=138.9
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEee---------ccccccEEEEEeee-CCCccEEEEEc-CCCe
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTL---------YGHEKGVNCVDYYH-GGDKPYLISGA-DDRL 103 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l---------~~h~~~v~~~~~~~-~~~~~~l~s~~-~d~~ 103 (381)
.|..+...+++. +.++...++.|++|++... ...+..+ .++.....+++++| ++. ++++.+ .++.
T Consensus 92 ~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~-~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~--lyv~d~~~~~~ 167 (329)
T 3fvz_A 92 LPHGLSIDTDGN-YWVTDVALHQVFKLDPHSK-EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA--VFVSDGYCNSR 167 (329)
T ss_dssp SEEEEEECTTSC-EEEEETTTTEEEEECTTCS-SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC--EEEEECSSCCE
T ss_pred CceEEEECCCCC-EEEEECCCCEEEEEeCCCC-eEEEEEecccCCCCCCccccCCCcEEEEeCCCCe--EEEEeCCCCCe
Confidence 577788887655 7778888899999998532 1134444 34556789999998 555 677776 6999
Q ss_pred EEEEECCCCeEEEEeccCC----------CCEEEEEEecC-CCEEEEEeCCCCEEEEeCCCCeeeEEEe--cCCcceEEE
Q psy4650 104 VKIWDYQNKTCVQTLEGHG----------QNISAVCFHPE-LPIVITGSEDGSVRVWHSGTHRLEISLT--YGLERVWTI 170 (381)
Q Consensus 104 v~vwd~~~~~~~~~~~~~~----------~~v~~~~~~p~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~--~~~~~v~~v 170 (381)
|++|+ ..+..+..+.... .....++++|+ +.++++...++.|++||..+|+.+..+. .+...+.++
T Consensus 168 I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~ 246 (329)
T 3fvz_A 168 IVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAI 246 (329)
T ss_dssp EEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEE
T ss_pred EEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCccee
Confidence 99999 5566666664222 23789999998 6677777778999999999898888874 345678899
Q ss_pred EEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccC
Q psy4650 171 SSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLD 250 (381)
Q Consensus 171 ~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d 250 (381)
+++| +..++.. |.+.+.+.....+..|+..++..+....... ........++++|+|..+++...+.++..|+
T Consensus 247 ~~~p-g~~~~~~---g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~---~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 247 SYIP-GFLFAVN---GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVR---KHFDMPHDIVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp EEET-TEEEEEE---CCCCTTCSCCCCEEEEETTTCCEEEEECCSS---SCCSSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred eecC-CEEEEeC---CCEEeccCCCcEEEEEEcCCCeEEEEEcCCC---CccCCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence 9999 4433332 2232223334455558877777665543210 1112222367789997777777777777776
Q ss_pred CC
Q psy4650 251 IS 252 (381)
Q Consensus 251 ~~ 252 (381)
+.
T Consensus 320 ~~ 321 (329)
T 3fvz_A 320 LT 321 (329)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 171
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.20 E-value=4.9e-11 Score=117.68 Aligned_cols=141 Identities=6% Similarity=-0.022 Sum_probs=98.5
Q ss_pred ceeeeecCCCceEEEEEec---------CCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEE
Q psy4650 36 KVDITTNKDMIEYKISYQE---------SSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 106 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~---------d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~v 106 (381)
...+..++++. +++.++. ++++++||+..........+ ...+.+++|||+|. .|+.++ ++.|++
T Consensus 62 ~~~~~~SpDg~-~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~--~la~~~-~~~i~~ 134 (719)
T 1z68_A 62 ASNYGLSPDRQ-FVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGS--KLAYVY-QNNIYL 134 (719)
T ss_dssp CSEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTT--CEEEEE-TTEEEE
T ss_pred eeeEEECCCCC-eEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCC--EEEEEE-CCeEEE
Confidence 45677778755 5555544 68999999864322000222 25688999999998 577765 789999
Q ss_pred EECCCCeEEEEe-ccCCCCE-----------------EEEEEecCCCEEEEEeCCC------------------------
Q psy4650 107 WDYQNKTCVQTL-EGHGQNI-----------------SAVCFHPELPIVITGSEDG------------------------ 144 (381)
Q Consensus 107 wd~~~~~~~~~~-~~~~~~v-----------------~~~~~~p~~~~l~s~~~d~------------------------ 144 (381)
|+..++...... .++...| .+++|+|+|+.|++++.|.
T Consensus 135 ~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~y 214 (719)
T 1z68_A 135 KQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPY 214 (719)
T ss_dssp ESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEEC
T ss_pred EeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecC
Confidence 999888765433 2333322 4899999999999887552
Q ss_pred ----------CEEEEeCCCCeee--EE------EecCCcceEEEEEcCCCCEEEEEe
Q psy4650 145 ----------SVRVWHSGTHRLE--IS------LTYGLERVWTISSLKGSNNVAIGY 183 (381)
Q Consensus 145 ----------~i~vwd~~~~~~~--~~------~~~~~~~v~~v~~~~~~~~l~~~~ 183 (381)
.|++||+.+++.. .. +.++...+.+++|+|+++++++..
T Consensus 215 p~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~ 271 (719)
T 1z68_A 215 PKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWL 271 (719)
T ss_dssp CBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEE
T ss_pred CCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEe
Confidence 7889999988753 11 234677899999999987766643
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.20 E-value=5e-09 Score=90.92 Aligned_cols=195 Identities=10% Similarity=0.070 Sum_probs=130.4
Q ss_pred cceeeeecCCCceEEEEEe-cCCeEEEecCCCccceeeEeec-cccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCC
Q psy4650 35 TKVDITTNKDMIEYKISYQ-ESSRVKAFNPIQVATLILKTLY-GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK 112 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~-~d~~v~i~~~~~~~~~~~~~l~-~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~ 112 (381)
.+..+...+..+.+.++.. .++.|.+|+.. ...+..+. ++...+.+++++|++. ++++...++.|.+||.. +
T Consensus 78 ~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~---g~~~~~~~~~~~~~~~~i~~~~~g~--l~v~~~~~~~i~~~~~~-g 151 (286)
T 1q7f_A 78 YPNRVAVVRNSGDIIVTERSPTHQIQIYNQY---GQFVRKFGATILQHPRGVTVDNKGR--IIVVECKVMRVIIFDQN-G 151 (286)
T ss_dssp SEEEEEEETTTTEEEEEECGGGCEEEEECTT---SCEEEEECTTTCSCEEEEEECTTSC--EEEEETTTTEEEEECTT-S
T ss_pred CceEEEEEcCCCeEEEEcCCCCCEEEEECCC---CcEEEEecCccCCCceEEEEeCCCC--EEEEECCCCEEEEEcCC-C
Confidence 4566666333345555554 37899999963 33344443 3456789999999775 77788889999999964 5
Q ss_pred eEEEEec--cCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecC--CcceEEEEEcCCCCEEEEEeCCC-e
Q psy4650 113 TCVQTLE--GHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYG--LERVWTISSLKGSNNVAIGYDEG-S 187 (381)
Q Consensus 113 ~~~~~~~--~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~--~~~v~~v~~~~~~~~l~~~~~dg-~ 187 (381)
..+..+. ++...+.+++++|++..+++...++.|.+||.. +..+..+... ...+..++++++|.++++...++ .
T Consensus 152 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~ 230 (286)
T 1q7f_A 152 NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN 230 (286)
T ss_dssp CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE
T ss_pred CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE
Confidence 5555553 344568999999999988887778999999974 5555555433 35788999999999888887775 8
Q ss_pred EEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCC
Q psy4650 188 VLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 188 v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~ 252 (381)
+.+ ||.. +..+........ ......+++.|+|..+++ ..+.++..|+..
T Consensus 231 i~~----------~~~~-g~~~~~~~~~~~----~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 231 LTI----------FTQD-GQLISALESKVK----HAQCFDVALMDDGSVVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp EEE----------ECTT-SCEEEEEEESSC----CSCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred EEE----------ECCC-CCEEEEEcccCC----CCcceeEEECCCCcEEEE-CCCCeEEEEEcc
Confidence 888 6643 333332221110 001112567789986666 456667777654
No 173
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.19 E-value=1.4e-10 Score=114.82 Aligned_cols=147 Identities=14% Similarity=0.006 Sum_probs=106.5
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeecccccc-----EEEEEeeeCCCccEEEEEcCC---------
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKG-----VNCVDYYHGGDKPYLISGADD--------- 101 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~-----v~~~~~~~~~~~~~l~s~~~d--------- 101 (381)
.+.+.+.+++ .+++++ |++|++|++.... ....+.+|... ..++.|||+|. +|+.++.+
T Consensus 19 ~~~~~w~~dg-~~~~~~--~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Spdg~--~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 19 LYSLRWISDH-EYLYKQ--ENNILVFNAEYGN--SSVFLENSTFDEFGHSINDYSISPDGQ--FILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCEEECSSS-EEEEEE--TTEEEEEETTTCC--EEEEECTTTTTTCCSCCCEEEECTTSS--EEEEEEEEEECSSSCEE
T ss_pred ccccEECCCC-cEEEEc--CCcEEEEECCCCc--eEEEEechhhhhhcccccceEECCCCC--EEEEEECCeeeEEEccc
Confidence 4567777774 688775 8999999997543 33446666533 24578899887 67777765
Q ss_pred CeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEE-ecCCcce-------------
Q psy4650 102 RLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL-TYGLERV------------- 167 (381)
Q Consensus 102 ~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~-~~~~~~v------------- 167 (381)
+.+.+||+.+++.. .+..|.+.+...+|+|+|+.|+.+. ++.|.+||+.++...... .++...+
T Consensus 92 ~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 92 ASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred eEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 56679999998854 4666778899999999999998885 689999999888754321 2222222
Q ss_pred ----EEEEEcCCCCEEEEEeCCCe-EEEE
Q psy4650 168 ----WTISSLKGSNNVAIGYDEGS-VLLK 191 (381)
Q Consensus 168 ----~~v~~~~~~~~l~~~~~dg~-v~i~ 191 (381)
..+.|+|+|+.|+.++.|.. +.+|
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~ 198 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLI 198 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEE
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceE
Confidence 35899999999998875443 5444
No 174
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.17 E-value=6e-10 Score=100.25 Aligned_cols=141 Identities=8% Similarity=-0.016 Sum_probs=103.0
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCcc---------ceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEE
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVA---------TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVK 105 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~---------~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~ 105 (381)
..+.+...+..+ ++++|+.+ .+.+|++.... ..... ...+.+ |+.++| ++. +|+.+ .++.|+
T Consensus 39 ~~nlLais~~~g-ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d~~--~L~v~-~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISNSKS-LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--HGD--QVLVS-TRNALY 109 (388)
T ss_dssp CCBCEEEETTTT-EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--ETT--EEEEE-ESSEEE
T ss_pred cccEEEEcCCCC-EEEEeCCC-EEEEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--CCC--EEEEE-cCCcEE
Confidence 344555555544 67777776 56669864322 11111 224566 999999 555 78887 889999
Q ss_pred EEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCC
Q psy4650 106 IWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDE 185 (381)
Q Consensus 106 vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d 185 (381)
+||+.+.........|..++.++.+.+. .++.+..||.+.+||+..+.... +...|++++|+|+| ++.|..|
T Consensus 110 v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETT
T ss_pred EEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcC
Confidence 9999877666666677778888776554 38889999999999999877643 34689999999999 6789999
Q ss_pred CeEEEEe
Q psy4650 186 GSVLLKV 192 (381)
Q Consensus 186 g~v~i~~ 192 (381)
|.+++|.
T Consensus 182 g~i~~~~ 188 (388)
T 1xip_A 182 RSFQSFA 188 (388)
T ss_dssp SCEEEEE
T ss_pred CcEEEEc
Confidence 9999943
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.16 E-value=1.8e-09 Score=93.70 Aligned_cols=196 Identities=12% Similarity=0.062 Sum_probs=131.6
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeec------cccccEEEEEee-eCCCccEEEEEc-CCCeEE
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLY------GHEKGVNCVDYY-HGGDKPYLISGA-DDRLVK 105 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~------~h~~~v~~~~~~-~~~~~~~l~s~~-~d~~v~ 105 (381)
..|..+...+++ .+.++...++.|.+|++.. ..+..+. +|...+.++++. +++. ++++.. .++.|.
T Consensus 30 ~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~g---~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~--l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 30 TEPSGVAVNAQN-DIIVADTNNHRIQIFDKEG---RFKFQFGECGKRDSQLLYPNRVAVVRNSGD--IIVTERSPTHQIQ 103 (286)
T ss_dssp SCEEEEEECTTC-CEEEEEGGGTEEEEECTTS---CEEEEECCBSSSTTCBSSEEEEEEETTTTE--EEEEECGGGCEEE
T ss_pred CCCceEEECCCC-CEEEEECCCCEEEEECCCC---cEEEEecccCCCcccccCceEEEEEcCCCe--EEEEcCCCCCEEE
Confidence 457778877764 5777778889999999852 2333332 355678999995 4443 555553 389999
Q ss_pred EEECCCCeEEEEecc-CCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEe--cCCcceEEEEEcCCCCEEEEE
Q psy4650 106 IWDYQNKTCVQTLEG-HGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLT--YGLERVWTISSLKGSNNVAIG 182 (381)
Q Consensus 106 vwd~~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~--~~~~~v~~v~~~~~~~~l~~~ 182 (381)
+|| .++..+..+.. +...+.+++++|+|..+++...++.|.+||.. ++....+. .+...+..++++|+|+++++.
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 999 56666666643 34578999999999988887778999999964 55555554 344568999999999888877
Q ss_pred eCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHH-HHhccCCC
Q psy4650 183 YDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVT-IKYRLDIS 252 (381)
Q Consensus 183 ~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~-~~~~~d~~ 252 (381)
+.++.+.+ ||..+. .+....... .+ .....++++++|.+++....+. .+..|+..
T Consensus 182 ~~~~~i~~----------~~~~g~-~~~~~~~~g---~~-~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 182 NRAHCVKV----------FNYEGQ-YLRQIGGEG---IT-NYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp GGGTEEEE----------EETTCC-EEEEESCTT---TS-CSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred CCCCEEEE----------EcCCCC-EEEEEccCC---cc-CCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 78888888 555332 232222110 00 1122256678887777766554 66777643
No 176
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.13 E-value=1.7e-10 Score=114.21 Aligned_cols=149 Identities=7% Similarity=0.038 Sum_probs=105.2
Q ss_pred cEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCC-----EEEEEEecCCCEEEEEeCC---------CC
Q psy4650 80 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQN-----ISAVCFHPELPIVITGSED---------GS 145 (381)
Q Consensus 80 ~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~-----v~~~~~~p~~~~l~s~~~d---------~~ 145 (381)
...++.|+|++. +++++ |++|++||+.+++....+.+|... ...++|+|+|+.++.++.+ +.
T Consensus 18 ~~~~~~w~~dg~--~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 18 KLYSLRWISDHE--YLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCEEECSSSE--EEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred cccccEECCCCc--EEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 456899999885 77776 999999999999988778777543 2347899999999988875 55
Q ss_pred EEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeeccc----
Q psy4650 146 VRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANL---- 221 (381)
Q Consensus 146 i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---- 221 (381)
+.+||+.+++... +..+...+...+|+|+|+.+|.+. ++.+.+ |+..++....-.........+
T Consensus 94 ~~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~----------~~~~~~~~~~lt~~g~~~~~~~g~~ 161 (740)
T 4a5s_A 94 YDIYDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYVW-NNDIYV----------KIEPNLPSYRITWTGKEDIIYNGIT 161 (740)
T ss_dssp EEEEETTTTEECC-SSCCCTTEEEEEECSSTTCEEEEE-TTEEEE----------ESSTTSCCEECCSCCBTTTEEESBC
T ss_pred EEEEECCCCcEEE-cccCCCcceeeEECCCCCEEEEEE-CCeEEE----------EECCCCceEEEcCCCCccceecCcc
Confidence 6799999998643 555667899999999999999885 678888 555444322111101000011
Q ss_pred --------ccCCccccccCCceEEeeehHHH
Q psy4650 222 --------KTMPEVFENITAGVVLTLSVHVT 244 (381)
Q Consensus 222 --------~~~~~~~~~~~dg~~l~~~~~d~ 244 (381)
.+....+.|+|||+.|++...+.
T Consensus 162 ~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~ 192 (740)
T 4a5s_A 162 DWVYEEEVFSAYSALWWSPNGTFLAYAQFND 192 (740)
T ss_dssp CHHHHHHTSSSSBCEEECTTSSEEEEEEEEC
T ss_pred cccccchhcCCCcceEECCCCCEEEEEEEcc
Confidence 11122257999999999876544
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.13 E-value=8.5e-10 Score=100.13 Aligned_cols=201 Identities=7% Similarity=-0.099 Sum_probs=124.8
Q ss_pred eeecCCCceEEEEEecCCe--EEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE
Q psy4650 39 ITTNKDMIEYKISYQESSR--VKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 39 i~~~~~~~~~~~s~~~d~~--v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 116 (381)
..+.+++..+++....++. +.+|++.. ........+|...+.++.|+|++. .|+.++.++.+.+||+.+++...
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~--g~~~~lt~~~~~~~~~~~~spdg~--~l~~~~~~~~l~~~d~~~g~~~~ 116 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNT--QVATQLTEGRGDNTFGGFLSPDDD--ALFYVKDGRNLMRVDLATLEENV 116 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTT--CEEEECCCSSCBCSSSCEECTTSS--EEEEEETTTEEEEEETTTCCEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCC--CceEEeeeCCCCCccceEEcCCCC--EEEEEeCCCeEEEEECCCCccee
Confidence 4567775545555444674 77778753 333344456666666788999887 78888889999999999998777
Q ss_pred EeccCCCCEEEEE--EecCCCEEEEE----------------------eCCCCEEEEeCCCCeeeEEEecCCcceEEEEE
Q psy4650 117 TLEGHGQNISAVC--FHPELPIVITG----------------------SEDGSVRVWHSGTHRLEISLTYGLERVWTISS 172 (381)
Q Consensus 117 ~~~~~~~~v~~~~--~~p~~~~l~s~----------------------~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~ 172 (381)
.+..+...+.... ++|++..++.. +.+..|.+||+.+++... +..+...+..+.|
T Consensus 117 ~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~ 195 (388)
T 3pe7_A 117 VYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIY 195 (388)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEE
T ss_pred eeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-eecCCccccccEE
Confidence 7766666554444 48899887642 234679999999986544 3345567899999
Q ss_pred cC-CCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHH-----HH
Q psy4650 173 LK-GSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVT-----IK 246 (381)
Q Consensus 173 ~~-~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~-----~~ 246 (381)
+| +|+.++.+..++. ......+..+|..++.... +..... ........|+|||+.+++.+... ..
T Consensus 196 sp~dg~~l~~~~~~~~----~~~~~~l~~~d~~~~~~~~-l~~~~~----~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (388)
T 3pe7_A 196 RPYDDSTVAFCHEGPH----DLVDARMWLINEDGTNMRK-VKTHAE----GESCTHEFWVPDGSALVYVSYLKGSPDRFI 266 (388)
T ss_dssp ETTEEEEEEEEECSCT----TTSSCSEEEEETTSCCCEE-SCCCCT----TEEEEEEEECTTSSCEEEEEEETTCCCEEE
T ss_pred CCCCCCEEEEEEecCC----CCCcceEEEEeCCCCceEE-eeeCCC----CcccccceECCCCCEEEEEecCCCCCcceE
Confidence 99 9998888775320 0001122226654443211 111100 00001146889999886654322 25
Q ss_pred hccCCCc
Q psy4650 247 YRLDISD 253 (381)
Q Consensus 247 ~~~d~~~ 253 (381)
+.|++..
T Consensus 267 ~~~d~~~ 273 (388)
T 3pe7_A 267 YSADPET 273 (388)
T ss_dssp EEECTTT
T ss_pred EEEecCC
Confidence 6677654
No 178
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.10 E-value=5.3e-09 Score=92.94 Aligned_cols=152 Identities=12% Similarity=0.092 Sum_probs=115.0
Q ss_pred cceeeeecCCCceEEEEEe-cCCeEEEecCCCccceeeEeec----------cccccEEEEEeeeCCCccEEEEEcCCCe
Q psy4650 35 TKVDITTNKDMIEYKISYQ-ESSRVKAFNPIQVATLILKTLY----------GHEKGVNCVDYYHGGDKPYLISGADDRL 103 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~-~d~~v~i~~~~~~~~~~~~~l~----------~h~~~v~~~~~~~~~~~~~l~s~~~d~~ 103 (381)
.|..+...++.+.+.++.+ .++.|++|++. ...+..+. ++.....+++++|++. .++++...++.
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~---g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g-~l~v~d~~~~~ 219 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS---GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLD-QLCVADRENGR 219 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEECTT---SCEEEEECEECCSSSCCTTEESCEEEEEEETTTT-EEEEEETTTTE
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC---CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCC-EEEEEECCCCE
Confidence 5778888884466777775 68999999964 33444443 2334589999999733 27788889999
Q ss_pred EEEEECCCCeEEEEec--cCCCCEEEEEEecCCCEEEEE-------eCCCCEEEEeCCCCeeeEEEe---cCCcceEEEE
Q psy4650 104 VKIWDYQNKTCVQTLE--GHGQNISAVCFHPELPIVITG-------SEDGSVRVWHSGTHRLEISLT---YGLERVWTIS 171 (381)
Q Consensus 104 v~vwd~~~~~~~~~~~--~~~~~v~~~~~~p~~~~l~s~-------~~d~~i~vwd~~~~~~~~~~~---~~~~~v~~v~ 171 (381)
|++|+..+++.+..+. .+...+.+++|+| +..+.+. ..+..+++||..+++.+..+. .+...+..++
T Consensus 220 I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia 298 (329)
T 3fvz_A 220 IQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIV 298 (329)
T ss_dssp EEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEE
T ss_pred EEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEE
Confidence 9999999888888774 4566789999999 4433333 334589999999999888873 4666789999
Q ss_pred EcCCCCEEEEEeCCCeEEEE
Q psy4650 172 SLKGSNNVAIGYDEGSVLLK 191 (381)
Q Consensus 172 ~~~~~~~l~~~~~dg~v~i~ 191 (381)
++|+|.++++...++.|++|
T Consensus 299 ~~~dG~lyvad~~~~~I~~~ 318 (329)
T 3fvz_A 299 ASEDGTVYIGDAHTNTVWKF 318 (329)
T ss_dssp ECTTSEEEEEESSSCCEEEE
T ss_pred ECCCCCEEEEECCCCEEEEE
Confidence 99999888888888888883
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.07 E-value=1.3e-08 Score=87.96 Aligned_cols=184 Identities=9% Similarity=0.032 Sum_probs=129.0
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeecccc-ccEEEEEeeeCCCccEEEEEcC-CCeEEEEECCCCe
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHE-KGVNCVDYYHGGDKPYLISGAD-DRLVKIWDYQNKT 113 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~-~~v~~~~~~~~~~~~~l~s~~~-d~~v~vwd~~~~~ 113 (381)
+..+...+++ .+++ +.++.|..||+ + ...+..+..+. ..+.++.+.|++. .+++.+. ++.+..+|. +++
T Consensus 39 ~~~~~~~pdG-~ilv--s~~~~V~~~d~-~--G~~~W~~~~~~~~~~~~~~~~~dG~--~lv~~~~~~~~v~~vd~-~Gk 109 (276)
T 3no2_A 39 CNSVAATKAG-EILF--SYSKGAKMITR-D--GRELWNIAAPAGCEMQTARILPDGN--ALVAWCGHPSTILEVNM-KGE 109 (276)
T ss_dssp CCEEEECTTS-CEEE--ECBSEEEEECT-T--SCEEEEEECCTTCEEEEEEECTTSC--EEEEEESTTEEEEEECT-TSC
T ss_pred CcCeEECCCC-CEEE--eCCCCEEEECC-C--CCEEEEEcCCCCccccccEECCCCC--EEEEecCCCCEEEEEeC-CCC
Confidence 4555666664 4666 34678999998 3 45667776543 4788899999887 6777766 778888886 566
Q ss_pred EEEEec------cCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCe
Q psy4650 114 CVQTLE------GHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGS 187 (381)
Q Consensus 114 ~~~~~~------~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~ 187 (381)
.+..+. ++......+++.++|.++++...++.|..||.. |+.++.+... ..+.++...++|..+++++.++.
T Consensus 110 ~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~ 187 (276)
T 3no2_A 110 VLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHC 187 (276)
T ss_dssp EEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSE
T ss_pred EEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCe
Confidence 666554 222344566789999999999999999999998 9999988764 45567788899998888887777
Q ss_pred EEEEecCCCceEEEecCCCEEEEEecCceee-cccccCCccccccCCceEEeeeh
Q psy4650 188 VLLKVGREEPAVSMDVNGCKIIWARHSEVQQ-ANLKTMPEVFENITAGVVLTLSV 241 (381)
Q Consensus 188 v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~~l~~~~ 241 (381)
+.. +|..+|+.+|........ ..+.. .......++|..++...
T Consensus 188 v~~----------~d~~tG~~~w~~~~~~~~~~~l~~-~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 188 FVQ----------LNLESNRIVRRVNANDIEGVQLFF-VAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEE----------ECTTTCCEEEEEEGGGSBSCCCSE-EEEEEECTTSCEEEEEE
T ss_pred EEE----------EeCcCCcEEEEecCCCCCCccccc-cccceEcCCCCEEEEec
Confidence 776 999999999998643211 11110 11123346777777664
No 180
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.04 E-value=6.2e-09 Score=93.63 Aligned_cols=131 Identities=11% Similarity=0.059 Sum_probs=101.7
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
.+.+.+ + +.+++.+ .++.|++||+.... .......|...+.++.+.+. .++.+..||.+.+||+.++...
T Consensus 90 V~~l~f--d-~~~L~v~-~~~~l~v~dv~sl~--~~~~~~~~~~~v~~i~~~~p----~~av~~~dG~L~v~dl~~~~~~ 159 (388)
T 1xip_A 90 VIFVCF--H-GDQVLVS-TRNALYSLDLEELS--EFRTVTSFEKPVFQLKNVNN----TLVILNSVNDLSALDLRTKSTK 159 (388)
T ss_dssp EEEEEE--E-TTEEEEE-ESSEEEEEESSSTT--CEEEEEECSSCEEEEEECSS----EEEEEETTSEEEEEETTTCCEE
T ss_pred eeEEEE--C-CCEEEEE-cCCcEEEEEchhhh--ccCccceeecceeeEEecCC----CEEEEECCCCEEEEEccCCccc
Confidence 556666 3 4567766 78999999986543 23355677888888877653 2888899999999999987754
Q ss_pred EEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCee--eEEE------e---cCCcceEEEEEcCCCCEEEEE
Q psy4650 116 QTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRL--EISL------T---YGLERVWTISSLKGSNNVAIG 182 (381)
Q Consensus 116 ~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~--~~~~------~---~~~~~v~~v~~~~~~~~l~~~ 182 (381)
. +...|.|++|+|+| ++.|..||++++|+..++.. ..++ . +|...|.++.|.+++.++++=
T Consensus 160 ~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 160 Q----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp E----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred c----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 3 45689999999999 67889999999999988775 5556 2 367889999999999887763
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.03 E-value=3.5e-09 Score=103.31 Aligned_cols=152 Identities=13% Similarity=0.032 Sum_probs=106.6
Q ss_pred eeeeecCCCceEEEEEecC----------CeEEEecCCCcc---ceeeEeec-cccccEEEEEeeeCCCccEEEEEcCC-
Q psy4650 37 VDITTNKDMIEYKISYQES----------SRVKAFNPIQVA---TLILKTLY-GHEKGVNCVDYYHGGDKPYLISGADD- 101 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d----------~~v~i~~~~~~~---~~~~~~l~-~h~~~v~~~~~~~~~~~~~l~s~~~d- 101 (381)
..+.+++++. .++.++.+ ..|++|++.... ......+. .+...+.++.|+|+|. +|+.++.+
T Consensus 133 ~~~~~spDg~-~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~--~la~~~~~~ 209 (662)
T 3azo_A 133 ADPVLLPERG-EVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGR--QAVWLAWDH 209 (662)
T ss_dssp EEEEEETTTT-EEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSS--EEEEEEECT
T ss_pred cCcEECCCCC-EEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCC--EEEEEECCC
Confidence 4566777755 45555544 589999986410 02234555 6667888999999987 67766644
Q ss_pred -------CeEEEEECC-CC---eEEEEeccCCCCEEEEEEecCCCEEEEEeCCC--CEEEEeCCCCeeeEEEecCCcc--
Q psy4650 102 -------RLVKIWDYQ-NK---TCVQTLEGHGQNISAVCFHPELPIVITGSEDG--SVRVWHSGTHRLEISLTYGLER-- 166 (381)
Q Consensus 102 -------~~v~vwd~~-~~---~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~--~i~vwd~~~~~~~~~~~~~~~~-- 166 (381)
..|.+||+. ++ .......+|...+..++|+|+|+++++++.++ .|.+||+.+++.......+...
T Consensus 210 ~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~ 289 (662)
T 3azo_A 210 PRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAG 289 (662)
T ss_dssp TCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSC
T ss_pred CCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccC
Confidence 479999998 56 44445555678899999999999777887788 5666676666654333332222
Q ss_pred ------eEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy4650 167 ------VWTISSLKGSNNVAIGYDEGSVLLKV 192 (381)
Q Consensus 167 ------v~~v~~~~~~~~l~~~~~dg~v~i~~ 192 (381)
+.+++|+|++.++++++. +...+|.
T Consensus 290 p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 320 (662)
T 3azo_A 290 PLWTPGMRWFAPLANGLIAVVHGK-GAAVLGI 320 (662)
T ss_dssp CCCSTTCCSEEECTTSCEEEEEBS-SSCEEEE
T ss_pred ccccccCceEeEeCCCEEEEEEEc-CccEEEE
Confidence 467889999999999988 9888864
No 182
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.01 E-value=3.8e-12 Score=115.83 Aligned_cols=108 Identities=19% Similarity=0.241 Sum_probs=91.9
Q ss_pred hccCCCcChhHHHHHHHHHhhhhhhccccceeeEEEecccC---C-cccccccChHHHHHHHHHHhhhhhhhhHhhhccc
Q psy4650 247 YRLDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYD---G-LDFHHNVSRARFESLIGGLLTSFVQPCMHVLSTL 322 (381)
Q Consensus 247 ~~~d~~~~~~~~~~l~~~~e~ak~~lS~~~~~~i~~~~l~~---g-~~~~~~itr~~fe~l~~~l~~~~~~~~~~~Ls~~ 322 (381)
+..++..+++.+.+++.++|++|+.|+...+..+.++.+++ | .++...++|++|++++.+++.++.+.++++|...
T Consensus 248 ~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~~~l~~~ 327 (383)
T 1dkg_D 248 QGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDA 327 (383)
T ss_dssp HCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHHHHHHTT
T ss_pred hCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 35566777889999999999999999998888888887654 3 5667799999999999999999999999999874
Q ss_pred cceeeEeeccccCcceEEeecHHHHHHHHHHHHHH
Q psy4650 323 QSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTS 357 (381)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 357 (381)
. +....+..++++||+.+.|.+++++++.|++
T Consensus 328 ~---~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~ 359 (383)
T 1dkg_D 328 G---LSVSDIDDVILVGGQTRMPMVQKKVAEFFGK 359 (383)
T ss_dssp T---CCTTTCCEEEEESGGGGSHHHHHHHHHHHSS
T ss_pred C---CCHhhCCEEEEecCccccHHHHHHHHHHhCC
Confidence 3 3345567788899999999999999999974
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.99 E-value=3.6e-08 Score=85.99 Aligned_cols=192 Identities=8% Similarity=-0.089 Sum_probs=126.9
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 114 (381)
.+..+...+++..+++++..++.|..|++... ...+..+...+.+++++|++. ++++...++.|.+||..+++.
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~~~~dg~--l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ----LSPEMHPSHHQNGHCLNKQGH--LIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC----EEEEESSCSSEEEEEECTTCC--EEEEETTTTEEEEECSTTCCE
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC----eEEEECCCCCcceeeECCCCc--EEEEecCCCeEEEEcCCCCcE
Confidence 44567777776657888888999999998642 455666778899999999876 677777789999999988875
Q ss_pred EEEeccC----CCCEEEEEEecCCCEEEEE----e-------------CCCCEEEEeCCCCeeeEEEecCCcceEEEEEc
Q psy4650 115 VQTLEGH----GQNISAVCFHPELPIVITG----S-------------EDGSVRVWHSGTHRLEISLTYGLERVWTISSL 173 (381)
Q Consensus 115 ~~~~~~~----~~~v~~~~~~p~~~~l~s~----~-------------~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~ 173 (381)
....... ...+..++++|+|.++++. . ..+.|..+|.. ++ ...+..+......++|+
T Consensus 103 ~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s 180 (296)
T 3e5z_A 103 ESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFL 180 (296)
T ss_dssp EEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEEC
T ss_pred EEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEEC
Confidence 4433221 1245679999999988873 2 12345555554 44 33444555677899999
Q ss_pred CCCCEEEEEeCCCeEEEEecCCCceEEEecC-CCEE---EEEecCceeecccccCCccccccCCceEEeeehHHHHHhcc
Q psy4650 174 KGSNNVAIGYDEGSVLLKVGREEPAVSMDVN-GCKI---IWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRL 249 (381)
Q Consensus 174 ~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~ 249 (381)
|+|+.+++.+.++.+.+ |+.. ++.. ..... ...+....+++.++|.+.+.. ...+..|
T Consensus 181 ~dg~~lv~~~~~~~i~~----------~~~~~~g~~~~~~~~~~------~~~~~p~~i~~d~~G~l~v~~--~~~v~~~ 242 (296)
T 3e5z_A 181 PSGNLLVSDTGDNATHR----------YCLNARGETEYQGVHFT------VEPGKTDGLRVDAGGLIWASA--GDGVHVL 242 (296)
T ss_dssp TTSCEEEEETTTTEEEE----------EEECSSSCEEEEEEEEC------CSSSCCCSEEEBTTSCEEEEE--TTEEEEE
T ss_pred CCCCEEEEeCCCCeEEE----------EEECCCCcCcCCCeEee------CCCCCCCeEEECCCCCEEEEc--CCeEEEE
Confidence 99998877777788888 5543 2322 00010 011222235677888765555 5566667
Q ss_pred CCC
Q psy4650 250 DIS 252 (381)
Q Consensus 250 d~~ 252 (381)
+..
T Consensus 243 ~~~ 245 (296)
T 3e5z_A 243 TPD 245 (296)
T ss_dssp CTT
T ss_pred CCC
Confidence 654
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.98 E-value=3e-08 Score=85.05 Aligned_cols=197 Identities=9% Similarity=-0.012 Sum_probs=128.6
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeec-cccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLY-GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~-~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
.+..+...+++. +.++.. ++.|.+|++... ....+. .....+.++++.+++. ++++...++.|.+|+..+..
T Consensus 68 ~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~---~~~~~~~~~~~~p~~i~~~~~g~--l~v~~~~~~~i~~~~~~~~~ 140 (270)
T 1rwi_B 68 QPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSN---NQTVLPFDGLNYPEGLAVDTQGA--VYVADRGNNRVVKLAAGSKT 140 (270)
T ss_dssp SCCCEEECTTCC-EEEEET-TTEEEEECTTCS---CCEECCCCSCSSEEEEEECTTCC--EEEEEGGGTEEEEECTTCCS
T ss_pred CcceeEECCCCC-EEEEcC-CCEEEEEeCCCc---eEeeeecCCcCCCcceEECCCCC--EEEEECCCCEEEEEECCCce
Confidence 456677776644 555544 889999998642 222222 2336789999998775 67777778899999866554
Q ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEec
Q psy4650 114 CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVG 193 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~ 193 (381)
...........+.+++++|++..+++...++.|.+||..++........+...+..++++++|.+.++...++.+..
T Consensus 141 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~--- 217 (270)
T 1rwi_B 141 QTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVK--- 217 (270)
T ss_dssp CEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEE---
T ss_pred eEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEE---
Confidence 33322233345688999999997777777889999999876654333333367889999999987777777778877
Q ss_pred CCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 194 REEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 194 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
|+..+......... .+ .....+++.++|...+....++++..++....
T Consensus 218 -------~~~~~~~~~~~~~~-----~~-~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 218 -------LLAGSTTSTVLPFT-----GL-NTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp -------ECTTCSCCEECCCC-----SC-SCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred -------EcCCCCcceeeccC-----CC-CCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 55544332111000 01 11122566788987777777777777766543
No 185
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.94 E-value=3.6e-08 Score=89.34 Aligned_cols=166 Identities=10% Similarity=-0.016 Sum_probs=108.3
Q ss_pred ceeeEeeccccccEEE-----EEeeeCCCccEEEEEcC-CC--eEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEE
Q psy4650 68 TLILKTLYGHEKGVNC-----VDYYHGGDKPYLISGAD-DR--LVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVIT 139 (381)
Q Consensus 68 ~~~~~~l~~h~~~v~~-----~~~~~~~~~~~l~s~~~-d~--~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s 139 (381)
...+..+..|...... .+|+|+|. .|+.++. ++ .|.+||..+++......++...+..+.|+|+|+.|+.
T Consensus 20 g~~~~~lt~~~~~~~~~~~~~~~~SpDg~--~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~ 97 (388)
T 3pe7_A 20 GAQVTRLTPPDVTCHRNYFYQKCFTRDGS--KLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFY 97 (388)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSC--EEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEE
T ss_pred CcceEEecCCcccccchhhcCccCCCCCC--EEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEE
Confidence 3445667777766666 88999987 5776665 66 4888899999887777777666667889999999999
Q ss_pred EeCCCCEEEEeCCCCeeeEEEecCCcceEEEE--EcCCCCEEEEEeCCCeE-E----------EE-ecCCCceEEEecCC
Q psy4650 140 GSEDGSVRVWHSGTHRLEISLTYGLERVWTIS--SLKGSNNVAIGYDEGSV-L----------LK-VGREEPAVSMDVNG 205 (381)
Q Consensus 140 ~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~--~~~~~~~l~~~~~dg~v-~----------i~-~~~~~~~~~~d~~~ 205 (381)
++.++.+.+||+.+++.......+...+.... ++|++..++....++.- . .+ ......+..||..+
T Consensus 98 ~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 98 VKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp EETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred EeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 99999999999999987766665555554343 47888887643211000 0 00 00112334477776
Q ss_pred CEEEEEecCceeecccccCCccccccC-CceEEeeehH
Q psy4650 206 CKIIWARHSEVQQANLKTMPEVFENIT-AGVVLTLSVH 242 (381)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~ 242 (381)
+....-.... .......|+| ||..+++...
T Consensus 178 g~~~~l~~~~-------~~~~~~~~sp~dg~~l~~~~~ 208 (388)
T 3pe7_A 178 GESTVILQEN-------QWLGHPIYRPYDDSTVAFCHE 208 (388)
T ss_dssp CCEEEEEEES-------SCEEEEEEETTEEEEEEEEEC
T ss_pred CceEEeecCC-------ccccccEECCCCCCEEEEEEe
Confidence 6543222111 0111256889 9998887664
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.93 E-value=9.4e-08 Score=84.79 Aligned_cols=192 Identities=9% Similarity=-0.043 Sum_probs=127.8
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
+..+...+ ..+.++...++.|.+||+.+ ...+.++. .......+++++++. ++++...++.|.+||..+++..
T Consensus 46 ~~~i~~~~--~~lyv~~~~~~~v~viD~~t--~~~~~~i~-~~~~p~~i~~~~~g~--lyv~~~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 46 AQSMVIRD--GIGWIVVNNSHVIFAIDINT--FKEVGRIT-GFTSPRYIHFLSDEK--AYVTQIWDYRIFIINPKTYEIT 118 (328)
T ss_dssp EEEEEEET--TEEEEEEGGGTEEEEEETTT--CCEEEEEE-CCSSEEEEEEEETTE--EEEEEBSCSEEEEEETTTTEEE
T ss_pred ceEEEEEC--CEEEEEEcCCCEEEEEECcc--cEEEEEcC-CCCCCcEEEEeCCCe--EEEEECCCCeEEEEECCCCeEE
Confidence 44555433 44556666788999999974 34445554 346788999988763 5566658999999999999877
Q ss_pred EEeccCC-----CCEEEEEEecCCCEEEEEe-CCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCC----
Q psy4650 116 QTLEGHG-----QNISAVCFHPELPIVITGS-EDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDE---- 185 (381)
Q Consensus 116 ~~~~~~~-----~~v~~~~~~p~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d---- 185 (381)
..+.... .....+++ .++..+++.. .++.|.+||..+++....+... .....+.++|+|++++++..+
T Consensus 119 ~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 119 GYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp EEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTC
T ss_pred EEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCC
Confidence 7665332 13456666 3444444443 4889999999999988877653 345678889988866665543
Q ss_pred ------CeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 186 ------GSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 186 ------g~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
+.+.+ +|..++.......... ......++++||+..+++... ..+.+|...
T Consensus 197 ~~~~~~~~v~~----------id~~t~~v~~~~~~~~-----g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t 253 (328)
T 3dsm_A 197 PYGYEAPSLYR----------IDAETFTVEKQFKFKL-----GDWPSEVQLNGTRDTLYWINN--DIWRMPVEA 253 (328)
T ss_dssp SSCBCCCEEEE----------EETTTTEEEEEEECCT-----TCCCEEEEECTTSCEEEEESS--SEEEEETTC
T ss_pred ccccCCceEEE----------EECCCCeEEEEEecCC-----CCCceeEEEecCCCEEEEEcc--EEEEEECCC
Confidence 55655 8888887654432110 122334678899888887665 555666643
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.92 E-value=3.9e-08 Score=84.35 Aligned_cols=196 Identities=10% Similarity=0.015 Sum_probs=123.0
Q ss_pred cceeeeecCCCceEEE-EEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 35 TKVDITTNKDMIEYKI-SYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~-s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
.|..+...+++. +.+ +...++.|..|++...... .....+...+.++++++++. ++++.. ++.|.+||..+..
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~g~--l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGMYGRVVKLATGSTGTT--VLPFNGLYQPQGLAVDGAGT--VYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSSSCEEEEECC-----E--ECCCCSCCSCCCEEECTTCC--EEEEET-TTEEEEECTTCSC
T ss_pred CccceEECCCCC-EEEEccCCCCcEEEecCCCcccc--eEeeCCcCCcceeEECCCCC--EEEEcC-CCEEEEEeCCCce
Confidence 677888887754 555 5567889999997532211 11123345678899988766 566655 8899999987654
Q ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEec
Q psy4650 114 CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVG 193 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~ 193 (381)
...........+..++++|+|..+++...++.|.+||..+.............+..++++++|+++++...++.+.+
T Consensus 99 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~--- 175 (270)
T 1rwi_B 99 QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVK--- 175 (270)
T ss_dssp CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEE---
T ss_pred EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEE---
Confidence 33222223356899999999997777777889999987655433322223346778999999987777767778877
Q ss_pred CCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCC
Q psy4650 194 REEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 194 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~ 252 (381)
||..++......... + .....+++.++|...+.....+....++..
T Consensus 176 -------~~~~~~~~~~~~~~~-----~-~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 176 -------LEAESNNQVVLPFTD-----I-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp -------ECTTTCCEEECCCSS-----C-CSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred -------EecCCCceEeecccC-----C-CCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 666554432211111 1 112225667788665555555566666654
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.92 E-value=3.6e-08 Score=87.46 Aligned_cols=176 Identities=9% Similarity=0.044 Sum_probs=118.2
Q ss_pred ecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEEEEEec
Q psy4650 53 QESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132 (381)
Q Consensus 53 ~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p 132 (381)
+.++.++.|. ......+.++...+.+++|+|++. +++++..++.|.+||..+++.......+...+.+++++|
T Consensus 24 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~--l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~ 96 (333)
T 2dg1_A 24 ISESELQTIT-----AEPWLEISKKGLQLEGLNFDRQGQ--LFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK 96 (333)
T ss_dssp CCGGGSCEEE-----CEEEEEEESSCCCEEEEEECTTSC--EEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT
T ss_pred eecccCcccc-----cceeEEEeccCccccCcEECCCCC--EEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC
Confidence 5566777773 234456667777889999998776 677888899999999988876554445667899999999
Q ss_pred CCCEEEEEeCC----CCEEEEeCCCCeeeEEEe--cCCcceEEEEEcCCCCEEEEEeCC------CeEEEEecCCCceEE
Q psy4650 133 ELPIVITGSED----GSVRVWHSGTHRLEISLT--YGLERVWTISSLKGSNNVAIGYDE------GSVLLKVGREEPAVS 200 (381)
Q Consensus 133 ~~~~l~s~~~d----~~i~vwd~~~~~~~~~~~--~~~~~v~~v~~~~~~~~l~~~~~d------g~v~i~~~~~~~~~~ 200 (381)
++.++++...+ +.|.+||..++.....+. .....+..++++|+|.++++...+ +.+..
T Consensus 97 dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~---------- 166 (333)
T 2dg1_A 97 DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYY---------- 166 (333)
T ss_dssp TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEE----------
T ss_pred CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEE----------
Confidence 99988877666 689999998876543332 234568999999999877765531 33333
Q ss_pred EecCCCEEEEEecCceeecccccCCccccccCCceEEeee-hHHHHHhccCCC
Q psy4650 201 MDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLS-VHVTIKYRLDIS 252 (381)
Q Consensus 201 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~-~~d~~~~~~d~~ 252 (381)
+|..++....... . . .....+.++|||..++++ ..+...+.|++.
T Consensus 167 ~~~~~~~~~~~~~-~-----~-~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 167 VSPDFRTVTPIIQ-N-----I-SVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp ECTTSCCEEEEEE-E-----E-SSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EeCCCCEEEEeec-C-----C-CcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 6655443221110 0 0 111225678898766544 445566667664
No 189
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.90 E-value=8.3e-08 Score=85.52 Aligned_cols=117 Identities=8% Similarity=0.019 Sum_probs=85.1
Q ss_pred CCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCC---C--eEEEEECCCCeEEEEeccCCCCEEEEE
Q psy4650 55 SSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADD---R--LVKIWDYQNKTCVQTLEGHGQNISAVC 129 (381)
Q Consensus 55 d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d---~--~v~vwd~~~~~~~~~~~~~~~~v~~~~ 129 (381)
++.+.+|++..... ..+ ..+.++.|+|+|. .|+.++.+ + .|.+|++.+++.......+ . +..++
T Consensus 42 ~~~l~~~d~~~~~~---~~l----~~~~~~~~SpDg~--~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~ 110 (347)
T 2gop_A 42 ENTIVIENLKNNAR---RFI----ENATMPRISPDGK--KIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLE 110 (347)
T ss_dssp EEEEEEEETTTCCE---EEE----ESCEEEEECTTSS--EEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEE
T ss_pred cceEEEEeCCCCce---EEc----ccCCCeEECCCCC--EEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-cccee
Confidence 56788998864332 233 5688999999987 56665543 3 4778888888766555443 3 89999
Q ss_pred EecCCCEEEEEeC---------------------------CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEE
Q psy4650 130 FHPELPIVITGSE---------------------------DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIG 182 (381)
Q Consensus 130 ~~p~~~~l~s~~~---------------------------d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~ 182 (381)
|+|+|+.|+.++. ...|.+||+.+++.+..+.. . .+..+.|+|+| +++++
T Consensus 111 wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 111 WNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp ECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEE
T ss_pred ECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEE
Confidence 9999998887763 25799999999887455544 3 78889999999 77777
Q ss_pred eCC
Q psy4650 183 YDE 185 (381)
Q Consensus 183 ~~d 185 (381)
..+
T Consensus 188 ~~~ 190 (347)
T 2gop_A 188 PHR 190 (347)
T ss_dssp ECC
T ss_pred ecc
Confidence 554
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.89 E-value=2.7e-07 Score=81.71 Aligned_cols=151 Identities=9% Similarity=0.031 Sum_probs=101.5
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCC----CeEEEEECCC
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADD----RLVKIWDYQN 111 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d----~~v~vwd~~~ 111 (381)
+..+...+++ .+.+++..++.|.+|++.... .......+...+.+++++|++. ++++...+ +.|.+||..+
T Consensus 47 ~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~~~i~~~~dg~--l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 47 LEGLNFDRQG-QLFLLDVFEGNIFKINPETKE--IKRPFVSHKANPAAIKIHKDGR--LFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp EEEEEECTTS-CEEEEETTTCEEEEECTTTCC--EEEEEECSSSSEEEEEECTTSC--EEEEECTTSSSCCEEEEECTTS
T ss_pred ccCcEECCCC-CEEEEECCCCEEEEEeCCCCc--EEEEeeCCCCCcceEEECCCCc--EEEEeCCCCCCCceEEEEeCCC
Confidence 3455666654 466777888999999986422 2222225667899999999876 66666666 6899999988
Q ss_pred CeEEEEec--cCCCCEEEEEEecCCCEEEEEeC------CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEE-E
Q psy4650 112 KTCVQTLE--GHGQNISAVCFHPELPIVITGSE------DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAI-G 182 (381)
Q Consensus 112 ~~~~~~~~--~~~~~v~~~~~~p~~~~l~s~~~------d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~-~ 182 (381)
+.....+. .+...+..++++|+|..+++... .+.|..||..+++... +......+..++|+|+|+.+.. .
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~ 200 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTE 200 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEE
T ss_pred CEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEe
Confidence 76543332 24457899999999987776653 2456666665554433 2223345788999999986544 4
Q ss_pred eCCCeEEEEe
Q psy4650 183 YDEGSVLLKV 192 (381)
Q Consensus 183 ~~dg~v~i~~ 192 (381)
+.++.+.+|+
T Consensus 201 ~~~~~i~~~d 210 (333)
T 2dg1_A 201 TTANRLHRIA 210 (333)
T ss_dssp GGGTEEEEEE
T ss_pred CCCCeEEEEE
Confidence 5577887743
No 191
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.86 E-value=3e-07 Score=82.66 Aligned_cols=89 Identities=11% Similarity=0.012 Sum_probs=67.2
Q ss_pred EEEecCCCEEEEEeC-----------CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCC
Q psy4650 128 VCFHPELPIVITGSE-----------DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREE 196 (381)
Q Consensus 128 ~~~~p~~~~l~s~~~-----------d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~ 196 (381)
++|+|++..+..+.. .+.|.+||+.+++.+.++..+. +.+++|+|+|++|++++. +.+.+
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v------ 329 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNV------ 329 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEE------
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEE------
Confidence 688999886665432 3479999999999999998776 999999999999988886 88888
Q ss_pred ceEEEecCCC--EEEEEecCceeecccccCCccccccCCce
Q psy4650 197 PAVSMDVNGC--KIIWARHSEVQQANLKTMPEVFENITAGV 235 (381)
Q Consensus 197 ~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dg~ 235 (381)
||..++ +.+-.+. .....+..+.++|+|.
T Consensus 330 ----~D~~t~~l~~~~~i~------~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 330 ----YDISQPEPKLLRTIE------GAAEASLQVQFHPVGG 360 (361)
T ss_dssp ----EECSSSSCEEEEEET------TSCSSEEEEEECCCSC
T ss_pred ----EECCCCcceeeEEec------cCCCCcEEEEecCCCC
Confidence 888888 7664431 1223333356677764
No 192
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.84 E-value=2.2e-09 Score=97.57 Aligned_cols=201 Identities=6% Similarity=-0.124 Sum_probs=117.7
Q ss_pred eeeecCCCceEEEEEecCC--eEEEecCCCccceeeEeecccccc-EEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE
Q psy4650 38 DITTNKDMIEYKISYQESS--RVKAFNPIQVATLILKTLYGHEKG-VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114 (381)
Q Consensus 38 ~i~~~~~~~~~~~s~~~d~--~v~i~~~~~~~~~~~~~l~~h~~~-v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 114 (381)
.+...+++..++++...++ .+.+|++... . ...+..+... ...+.|+|++. .|+.++.++.+.+||+.+++.
T Consensus 40 ~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~--~-~~~l~~~~~~~~~~~~~spdg~--~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 40 QKCFTQDGKKLLFAGDFDGNRNYYLLNLETQ--Q-AVQLTEGKGDNTFGGFISTDER--AFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTT--E-EEECCCSSCBCTTTCEECTTSS--EEEEEETTTEEEEEETTTCCE
T ss_pred cCcCCCCCCEEEEEEecCCCceEEEEECCCC--c-EEEeecCCCCccccceECCCCC--EEEEEEcCCcEEEEECCCCCc
Confidence 4556677555555554433 6777787542 2 2333333333 33478999887 788888889999999998876
Q ss_pred EEEeccCCCCEEE-------------------EEEecCCCEEEEE-----eCCCCEEEEeCCCCeeeEEEecCCcceEEE
Q psy4650 115 VQTLEGHGQNISA-------------------VCFHPELPIVITG-----SEDGSVRVWHSGTHRLEISLTYGLERVWTI 170 (381)
Q Consensus 115 ~~~~~~~~~~v~~-------------------~~~~p~~~~l~s~-----~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v 170 (381)
......+...... ..|+|++..++.+ ..+..|.+||+.+++..... .+...+..+
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~ 193 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHP 193 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccc
Confidence 6655545443222 3456777655433 35668999999988765544 355678899
Q ss_pred EEcC-CCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHH-----H
Q psy4650 171 SSLK-GSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHV-----T 244 (381)
Q Consensus 171 ~~~~-~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d-----~ 244 (381)
.|+| ++..++..+.++. ......+..+|..++.... +..... ........|+|||+.+++...+ .
T Consensus 194 ~~sp~dg~~l~~~~~~~~----~~~~~~l~~~d~~~~~~~~-l~~~~~----~~~~~~~~~spdg~~l~~~~~~~~~~~~ 264 (396)
T 3c5m_A 194 IYRPFDDSTVGFCHEGPH----DLVDARMWLVNEDGSNVRK-IKEHAE----GESCTHEFWIPDGSAMAYVSYFKGQTDR 264 (396)
T ss_dssp EEETTEEEEEEEEECSCS----SSCSCCCEEEETTSCCCEE-SSCCCT----TEEEEEEEECTTSSCEEEEEEETTTCCE
T ss_pred eECCCCCCEEEEEecCCC----CCCCceEEEEECCCCceeE-eeccCC----CccccceEECCCCCEEEEEecCCCCccc
Confidence 9999 7887776654322 0000122336665443211 111000 0001114688999987776543 2
Q ss_pred HHhccCCCc
Q psy4650 245 IKYRLDISD 253 (381)
Q Consensus 245 ~~~~~d~~~ 253 (381)
..+.|++..
T Consensus 265 ~l~~~d~~~ 273 (396)
T 3c5m_A 265 VIYKANPET 273 (396)
T ss_dssp EEEEECTTT
T ss_pred eEEEEECCC
Confidence 256677643
No 193
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.81 E-value=4.8e-08 Score=87.92 Aligned_cols=131 Identities=11% Similarity=0.131 Sum_probs=96.8
Q ss_pred cCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEc----------CCCeEEEEECCCCeEEEEeccC--
Q psy4650 54 ESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGA----------DDRLVKIWDYQNKTCVQTLEGH-- 121 (381)
Q Consensus 54 ~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~----------~d~~v~vwd~~~~~~~~~~~~~-- 121 (381)
.|++|.+||+.. ...+..+..+..+ .++|+|++. +++.+. .+++|.+||..+++.+..+...
T Consensus 29 ~d~~v~v~D~~t--~~~~~~i~~g~~p--~i~~spdg~--~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~ 102 (361)
T 2oiz_A 29 TESRVHVYDYTN--GKFLGMVPTAFNG--HVQVSNDGK--KIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK 102 (361)
T ss_dssp GGCEEEEEETTT--CCEEEEEECCEEE--EEEECTTSS--EEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT
T ss_pred ccCeEEEEECCC--CeEEEEecCCCCC--ceEECCCCC--EEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc
Confidence 367999999864 3455677766665 899999887 555553 3678999999998888777532
Q ss_pred ----CCCEEEEEEecCCCEEEEEeC--CCCEEEEeCCCCeeeEE-EecCCcceEEEEEcCCC-CEEEEEeCCCeEEEEe
Q psy4650 122 ----GQNISAVCFHPELPIVITGSE--DGSVRVWHSGTHRLEIS-LTYGLERVWTISSLKGS-NNVAIGYDEGSVLLKV 192 (381)
Q Consensus 122 ----~~~v~~~~~~p~~~~l~s~~~--d~~i~vwd~~~~~~~~~-~~~~~~~v~~v~~~~~~-~~l~~~~~dg~v~i~~ 192 (381)
......++++|+|++++++.. ++.|.+||+.+++.+.. +... ....+.+.|.+ ..+++.+.||.+.++.
T Consensus 103 ~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~~~~dg~~~~v~ 179 (361)
T 2oiz_A 103 RVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMTICGDGGLLTIN 179 (361)
T ss_dssp BCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEEEETTSSEEEEE
T ss_pred ccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEEECCCCcEEEEE
Confidence 234578999999998887763 68999999999988777 5432 22335667765 6777888889888744
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.80 E-value=6.5e-07 Score=85.17 Aligned_cols=186 Identities=12% Similarity=0.031 Sum_probs=125.9
Q ss_pred ceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECC--CCeEEEEeccCCC
Q psy4650 46 IEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ--NKTCVQTLEGHGQ 123 (381)
Q Consensus 46 ~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~--~~~~~~~~~~~~~ 123 (381)
..++++...+++|.++|+.+ ..++.++.. ...+..+.|+|++. +++.++.|+.|.+||+. +++.+..+....
T Consensus 167 ~~~~V~~~~~~~V~viD~~t--~~v~~~i~~-g~~p~~v~~SpDGr--~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~- 240 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGST--YEIKTVLDT-GYAVHISRLSASGR--YLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS- 240 (567)
T ss_dssp GEEEEEETTTTEEEEEETTT--CCEEEEEEC-SSCEEEEEECTTSC--EEEEEETTSEEEEEETTSSSCCEEEEEECCS-
T ss_pred ceEEEEeCCCCeEEEEECCC--CeEEEEEeC-CCCccceEECCCCC--EEEEEcCCCeEEEEECCCCCCcEeEEEecCC-
Confidence 45778888899999999864 345555543 34567999999887 78888899999999996 777777776533
Q ss_pred CEEEEEEe----cCCCEEEEEeC-CCCEEEEeCCCCeeeEEEecC-----------CcceEEEEEcCCCCEEE-EEeCCC
Q psy4650 124 NISAVCFH----PELPIVITGSE-DGSVRVWHSGTHRLEISLTYG-----------LERVWTISSLKGSNNVA-IGYDEG 186 (381)
Q Consensus 124 ~v~~~~~~----p~~~~l~s~~~-d~~i~vwd~~~~~~~~~~~~~-----------~~~v~~v~~~~~~~~l~-~~~~dg 186 (381)
....++|+ |+|++++.++. ++.+.++|..+.+.+..+... ...+..+..++++..++ ....+|
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 45889999 69997776654 799999999999988876532 12577788888765443 344557
Q ss_pred eEEEEecCCCceEEEecCCCE--EEEEecCceeecccccCCccccccCCceEEeeeh-HHHHHhccCCCcC
Q psy4650 187 SVLLKVGREEPAVSMDVNGCK--IIWARHSEVQQANLKTMPEVFENITAGVVLTLSV-HVTIKYRLDISDS 254 (381)
Q Consensus 187 ~v~i~~~~~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~-~d~~~~~~d~~~~ 254 (381)
.+.+ +|..+.. .+..+.. ..+...+.|+|||++++++. ..+.+..+|....
T Consensus 321 ~v~~----------vd~~~~~~~~v~~i~~-------~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~ 374 (567)
T 1qks_A 321 KILL----------VDYTDLNNLKTTEISA-------ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG 374 (567)
T ss_dssp EEEE----------EETTCSSEEEEEEEEC-------CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred eEEE----------EecCCCccceeeeeec-------cccccCceECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 7777 4543321 1111111 11111246788998876554 4455666776543
No 195
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=98.80 E-value=3.2e-09 Score=97.32 Aligned_cols=106 Identities=24% Similarity=0.298 Sum_probs=96.9
Q ss_pred cCCCcChhHHHHHHHHHhhhhhhccccceeeEEEecccCCcccccccChHHHHHHHHHHhhhhhhhhHhhhccccceeeE
Q psy4650 249 LDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPCMHVLSTLQSSNVF 328 (381)
Q Consensus 249 ~d~~~~~~~~~~l~~~~e~ak~~lS~~~~~~i~~~~l~~g~~~~~~itr~~fe~l~~~l~~~~~~~~~~~Ls~~~~~~~~ 328 (381)
.+...+.+.+.+|+.++|++|+.||...++.+.++++++|.++...++|++|++++.+++.++.+.++++|..+ .+.
T Consensus 265 ~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~---~~~ 341 (409)
T 4gni_A 265 KDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFNRLVESAVKKA---GLD 341 (409)
T ss_dssp CCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHHT---TCC
T ss_pred CCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHc---CCC
Confidence 56677889999999999999999999999999999999999999999999999999999999999999999874 444
Q ss_pred eeccccCcceEEeecHHHHHHHHHHHHHH
Q psy4650 329 VESLYDGLDFHHNVSRARFESLIGGLLTS 357 (381)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 357 (381)
...+..++++||+.+.|.+++++++.|+.
T Consensus 342 ~~~i~~V~LvGG~s~~p~v~~~l~~~f~~ 370 (409)
T 4gni_A 342 PLDVDEVIMSGGTSNTPRIAANFRYIFPE 370 (409)
T ss_dssp GGGCCEEEEESGGGGCHHHHHHHHHHSCT
T ss_pred HHHCCEEEEECCccccHHHHHHHHHHcCC
Confidence 56677888999999999999999999974
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.79 E-value=2e-06 Score=74.56 Aligned_cols=195 Identities=9% Similarity=-0.033 Sum_probs=122.8
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
..+..+...+++. +.++...++.|..|++. .. .....+..+...+.++++.+++. +.++...++.|..|+.....
T Consensus 15 ~~~~~i~~d~~g~-l~v~~~~~~~v~~~d~~-~~-~~~~~~~~~~~~~~~i~~~~~g~--l~v~~~~~~~i~~~~~~g~~ 89 (299)
T 2z2n_A 15 TGPYGITVSDKGK-VWITQHKANMISCINLD-GK-ITEYPLPTPDAKVMCLTISSDGE--VWFTENAANKIGRITKKGII 89 (299)
T ss_dssp CCEEEEEECTTSC-EEEEETTTTEEEEECTT-CC-EEEEECSSTTCCEEEEEECTTSC--EEEEETTTTEEEEECTTSCE
T ss_pred CCccceEECCCCC-EEEEecCCCcEEEEcCC-CC-eEEecCCcccCceeeEEECCCCC--EEEeCCCCCeEEEECCCCcE
Confidence 3567777777644 55555557899999986 22 22222334557899999988776 66776778899999986322
Q ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeE-EEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy4650 114 CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEI-SLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKV 192 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~-~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~ 192 (381)
....+......+.++++.|++.++++...++.|..||. ++.... ........+..+++.++|...++...++.+..
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~-- 166 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGR-- 166 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE--
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEE--
Confidence 22222234557899999999988887777889999998 554432 22334456889999999987777666677776
Q ss_pred cCCCceEEEecCCCEEEE-EecCceeecccccCCccccccCCceEEeeehHHHHHhccCC
Q psy4650 193 GREEPAVSMDVNGCKIIW-ARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDI 251 (381)
Q Consensus 193 ~~~~~~~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~ 251 (381)
+|. ++.... ..... ......+.+.++|...+..........++.
T Consensus 167 --------~~~-~g~~~~~~~~~~------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 167 --------ITE-SGDITEFKIPTP------ASGPVGITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp --------ECT-TCCEEEEECSST------TCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred --------EcC-CCcEEEeeCCCC------CCcceeEEECCCCCEEEEccCCceEEEECC
Confidence 665 333221 11100 011112455667775555444455556665
No 197
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.74 E-value=1.9e-07 Score=91.60 Aligned_cols=107 Identities=9% Similarity=-0.005 Sum_probs=80.6
Q ss_pred cccccEEEEEeeeCCCccEEE-----EEcCCCeEEEEECCCCeEEEEeccCCCCE--EEEEEecCCCEEEEEeCCCC---
Q psy4650 76 GHEKGVNCVDYYHGGDKPYLI-----SGADDRLVKIWDYQNKTCVQTLEGHGQNI--SAVCFHPELPIVITGSEDGS--- 145 (381)
Q Consensus 76 ~h~~~v~~~~~~~~~~~~~l~-----s~~~d~~v~vwd~~~~~~~~~~~~~~~~v--~~~~~~p~~~~l~s~~~d~~--- 145 (381)
+|...+.+++|||+|. +|+ +|+.+.+|++||+.+++.+. ..+...+ ..++|+|+|+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~--~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGK--KVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SSCEEEEEEEECTTSS--EEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTS
T ss_pred CCCEEEEEEEECCCCC--EEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCC
Confidence 5666799999999988 566 44556799999999987541 1122222 68999999999999988776
Q ss_pred ----------EEEEeCCCCee----eEEEecCCcceEEEEEcCCCCEEEEEeCCC
Q psy4650 146 ----------VRVWHSGTHRL----EISLTYGLERVWTISSLKGSNNVAIGYDEG 186 (381)
Q Consensus 146 ----------i~vwd~~~~~~----~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg 186 (381)
|++|++.++.. +.....+...+..+.|+|+|++++.++.++
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC
Confidence 99999998763 222233445788999999999888877665
No 198
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.73 E-value=4.6e-07 Score=89.15 Aligned_cols=141 Identities=9% Similarity=0.027 Sum_probs=94.4
Q ss_pred eeeecCCCceEEEEEecCC----eEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCe----------
Q psy4650 38 DITTNKDMIEYKISYQESS----RVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRL---------- 103 (381)
Q Consensus 38 ~i~~~~~~~~~~~s~~~d~----~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~---------- 103 (381)
.+.+++++..+.++.+.+| .|++||+....... ..+.+ ..+.+++|+|++. .|+.++.++.
T Consensus 129 ~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~-~~~~~--~~~~~~~wspDg~--~l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 129 GYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELP-DVLER--VKFSCMAWTHDGK--GMFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp EEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEE-EEEEE--ECSCCEEECTTSS--EEEEEECCCCSSCCSSSCCC
T ss_pred EEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCc-ccccC--cccceEEEEeCCC--EEEEEEECCccccccccccc
Confidence 4567777665555555444 89999987532221 12222 2367899999887 6777776655
Q ss_pred ------EEEEECCCCeE--EEEe--ccCCCCEEEEEEecCCCEEEEEeC-----CCCEEEEeCCC------Ce-eeEEEe
Q psy4650 104 ------VKIWDYQNKTC--VQTL--EGHGQNISAVCFHPELPIVITGSE-----DGSVRVWHSGT------HR-LEISLT 161 (381)
Q Consensus 104 ------v~vwd~~~~~~--~~~~--~~~~~~v~~~~~~p~~~~l~s~~~-----d~~i~vwd~~~------~~-~~~~~~ 161 (381)
|.+|++.++.. ...+ ..|...+..+.|+|+|++++.++. +..|.+||+.+ +. ....+.
T Consensus 204 ~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~ 283 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI 283 (710)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE
T ss_pred cCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee
Confidence 99999988752 2223 335566889999999998877654 56899999986 53 355565
Q ss_pred cCCcceEEEEEcCCCCEEEEEeC
Q psy4650 162 YGLERVWTISSLKGSNNVAIGYD 184 (381)
Q Consensus 162 ~~~~~v~~v~~~~~~~~l~~~~~ 184 (381)
.+...+.. .|+|+|..++..+.
T Consensus 284 ~~~~~~~~-~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 284 DNFEGEYD-YVTNEGTVFTFKTN 305 (710)
T ss_dssp CSSSSCEE-EEEEETTEEEEEEC
T ss_pred CCCCcEEE-EEeccCCEEEEEEC
Confidence 55555554 47888887776654
No 199
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.72 E-value=7.5e-07 Score=77.51 Aligned_cols=144 Identities=10% Similarity=-0.023 Sum_probs=102.8
Q ss_pred ceeeeecCCCceEEEEE----e-------------cCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEE
Q psy4650 36 KVDITTNKDMIEYKISY----Q-------------ESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISG 98 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~----~-------------~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~ 98 (381)
+..+...+++ .+.++. . ..+.|..+++. ..+..+..+.....+++|+|++. .+++.
T Consensus 117 ~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~----g~~~~~~~~~~~~~gi~~s~dg~--~lv~~ 189 (296)
T 3e5z_A 117 PNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD----GTLSAPIRDRVKPNGLAFLPSGN--LLVSD 189 (296)
T ss_dssp CCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT----SCEEEEECCCSSEEEEEECTTSC--EEEEE
T ss_pred CCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC----CCEEEeecCCCCCccEEECCCCC--EEEEe
Confidence 4567777764 455552 2 13467777764 12334456677789999999887 56888
Q ss_pred cCCCeEEEEECC-CCeE---EEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEE-c
Q psy4650 99 ADDRLVKIWDYQ-NKTC---VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISS-L 173 (381)
Q Consensus 99 ~~d~~v~vwd~~-~~~~---~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~-~ 173 (381)
+.++.|.+|++. ++.. ...+..+...+.+++++++|.++++. ++.|.+||.. ++.+..+..+.. +.+++| .
T Consensus 190 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~ 265 (296)
T 3e5z_A 190 TGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGG 265 (296)
T ss_dssp TTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEES
T ss_pred CCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEEC
Confidence 889999999986 4443 33333345566789999999877666 7889999986 777777776666 889999 5
Q ss_pred CCCCEEEEEeCCCeEEE
Q psy4650 174 KGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 174 ~~~~~l~~~~~dg~v~i 190 (381)
|+++.|.+++.++.+++
T Consensus 266 ~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 266 PEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp TTSCEEEEEETTEEEEE
T ss_pred CCCCEEEEEcCCeEEEE
Confidence 88888888887765553
No 200
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=98.70 E-value=9.4e-09 Score=96.65 Aligned_cols=110 Identities=18% Similarity=0.244 Sum_probs=95.6
Q ss_pred HHhccCCCcChhHHHHHHHHHhhhhhhccccceeeEEEecccC---C-cccccccChHHHHHHHHHHhhhhhhhhHhhhc
Q psy4650 245 IKYRLDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYD---G-LDFHHNVSRARFESLIGGLLTSFVQPCMHVLS 320 (381)
Q Consensus 245 ~~~~~d~~~~~~~~~~l~~~~e~ak~~lS~~~~~~i~~~~l~~---g-~~~~~~itr~~fe~l~~~l~~~~~~~~~~~Ls 320 (381)
..+..++..+++++++++.++|++|+.||...++.+.++.+++ | .++...++|++|++++.+++.++.++++++|.
T Consensus 215 ~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~ 294 (509)
T 2v7y_A 215 QEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQ 294 (509)
T ss_dssp HHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHH
T ss_pred HHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455677778889999999999999999999999999987765 3 56788999999999999999999999999998
Q ss_pred cccceeeEeeccccCcceEEeecHHHHHHHHHHHHHH
Q psy4650 321 TLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTS 357 (381)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 357 (381)
.+ .+....+..++++||+.+.|.+++++++.|++
T Consensus 295 ~a---~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~ 328 (509)
T 2v7y_A 295 DA---GLTPADIDKVILVGGSTRIPAVQEAIKRELGK 328 (509)
T ss_dssp HH---TCCGGGCSEEEEESGGGGCHHHHHHHHHHHSS
T ss_pred Hc---CCChhHCcEEEEECCcccChHHHHHHHHHhCC
Confidence 84 44556678889999999999999999999974
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.68 E-value=6.9e-06 Score=71.05 Aligned_cols=150 Identities=8% Similarity=0.003 Sum_probs=104.2
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
..+..+...+++ .+.++...++.+..|++.. ......+..+...+.++.+.+++. ++++...++.|..||. ++.
T Consensus 57 ~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g--~~~~~~~~~~~~~~~~i~~~~~g~--l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 57 AKVMCLTISSDG-EVWFTENAANKIGRITKKG--IIKEYTLPNPDSAPYGITEGPNGD--IWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTTS--CEEEEECSSTTCCEEEEEECTTSC--EEEEETTTTEEEEECT-TCC
T ss_pred CceeeEEECCCC-CEEEeCCCCCeEEEECCCC--cEEEEeCCCcCCCceeeEECCCCC--EEEEecCCceEEEECC-CCC
Confidence 456677777664 4566666678899999852 121222333456789999988765 6777777889999998 554
Q ss_pred EEE-EeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEE-EecCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 114 CVQ-TLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEIS-LTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 114 ~~~-~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~-~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
... ....+...+.++++.|++..+++...++.|..||. +++.... .......+.+++++++|.+.++...++.+..
T Consensus 131 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 208 (299)
T 2z2n_A 131 IREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGR 208 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred EEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEE
Confidence 332 23334557899999999988877777789999999 6655432 2334456889999999887776666777777
No 202
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.68 E-value=4.4e-07 Score=82.17 Aligned_cols=124 Identities=7% Similarity=-0.095 Sum_probs=81.2
Q ss_pred ecCCeEEEecCCCccceeeEeeccccccEEEEEeee-CCCccEEEEEcCC------CeEEEEECCCCeEEEEeccC-CCC
Q psy4650 53 QESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYH-GGDKPYLISGADD------RLVKIWDYQNKTCVQTLEGH-GQN 124 (381)
Q Consensus 53 ~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~-~~~~~~l~s~~~d------~~v~vwd~~~~~~~~~~~~~-~~~ 124 (381)
..+..+.+|++.... ...+..+...+..+.|+| ++. .|+.++.+ ..|.+||..++......... ...
T Consensus 165 ~~~~~l~~~d~~~g~---~~~~~~~~~~~~~~~~sp~dg~--~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 239 (396)
T 3c5m_A 165 NPTCRLIKVDIETGE---LEVIHQDTAWLGHPIYRPFDDS--TVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGES 239 (396)
T ss_dssp CCCEEEEEEETTTCC---EEEEEEESSCEEEEEEETTEEE--EEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEE
T ss_pred CCcceEEEEECCCCc---EEeeccCCcccccceECCCCCC--EEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCcc
Confidence 345678889886432 233345677899999999 665 34444332 46888898766543333321 235
Q ss_pred EEEEEEecCCCEEEEEeCC-----CCEEEEeCCCCeeeEEEecCCcceEEEEEcC-CCCEEEEEeC
Q psy4650 125 ISAVCFHPELPIVITGSED-----GSVRVWHSGTHRLEISLTYGLERVWTISSLK-GSNNVAIGYD 184 (381)
Q Consensus 125 v~~~~~~p~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~-~~~~l~~~~~ 184 (381)
+..++|+|+|+.|+.++.+ +.|.+||+.+++........ ... +.|+| +|+.++.++.
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~ 302 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGC 302 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEEC
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecC
Confidence 7889999999977766443 34999999988654433222 123 88999 9998887653
No 203
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.68 E-value=2.3e-06 Score=84.16 Aligned_cols=161 Identities=8% Similarity=-0.076 Sum_probs=106.8
Q ss_pred eeeeecCCCceEEEEEecCCe----------------EEEecCCCccc--eeeEeeccccccEEEEEeeeCCCccEEEEE
Q psy4650 37 VDITTNKDMIEYKISYQESSR----------------VKAFNPIQVAT--LILKTLYGHEKGVNCVDYYHGGDKPYLISG 98 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~----------------v~i~~~~~~~~--~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~ 98 (381)
..+.+.+++..+++ ++.++. |++|++.+... ..+.....|...+.++.|+|+|. +|+.+
T Consensus 174 ~~~~wspDg~~l~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~--~l~~~ 250 (710)
T 2xdw_A 174 SCMAWTHDGKGMFY-NAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGR--YVLLS 250 (710)
T ss_dssp CCEEECTTSSEEEE-EECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC--EEEEE
T ss_pred ceEEEEeCCCEEEE-EEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCC--EEEEE
Confidence 34667777554444 444444 99999865332 23334444667788999999987 56554
Q ss_pred cC-----CCeEEEEECCC------Ce-EEEEeccCCCCEEEEEEecCCCEEEEEeCC----CCEEEEeCCCCee--eEEE
Q psy4650 99 AD-----DRLVKIWDYQN------KT-CVQTLEGHGQNISAVCFHPELPIVITGSED----GSVRVWHSGTHRL--EISL 160 (381)
Q Consensus 99 ~~-----d~~v~vwd~~~------~~-~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d----~~i~vwd~~~~~~--~~~~ 160 (381)
+. +..|.+||+.+ +. ....+..+...+.. .|+|+|..++..+.. +.|.+||+.++.. ...+
T Consensus 251 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l 329 (710)
T 2xdw_A 251 IREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVL 329 (710)
T ss_dssp EECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE
T ss_pred EEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceec
Confidence 43 67899999976 42 34556556655554 588999877666543 3699999987742 3444
Q ss_pred ecCCc--ceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEE
Q psy4650 161 TYGLE--RVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKII 209 (381)
Q Consensus 161 ~~~~~--~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~ 209 (381)
..+.. .+..+.|++++.++++...++..++|. |+..+|..+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~--------~~~~~g~~~ 372 (710)
T 2xdw_A 330 VPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQL--------HDLATGALL 372 (710)
T ss_dssp ECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEE--------EETTTCCEE
T ss_pred cCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEE--------EECCCCCEE
Confidence 44433 678899998888888888899777754 666445433
No 204
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.64 E-value=9.4e-07 Score=78.60 Aligned_cols=137 Identities=8% Similarity=0.075 Sum_probs=85.5
Q ss_pred ceeeeecCCCceEEEEEecC--C--eEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcC-----------
Q psy4650 36 KVDITTNKDMIEYKISYQES--S--RVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGAD----------- 100 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d--~--~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~----------- 100 (381)
...+...|++..+.+..... + .+.+|++.... . ..+..+.. +.++.|+|++. .|+.++.
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~--~-~~l~~~~~-~~~~~wspdg~--~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS--S-KKILEAKN-IRSLEWNEDSR--KLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE--E-EEEEEESE-EEEEEECTTSS--EEEEEEECCCC-------
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc--e-EEEEcCCC-ccceeECCCCC--EEEEEEccCCCcCCcEEE
Confidence 34567777765444444332 3 36777775422 2 22333334 99999999887 5665542
Q ss_pred ----------------CCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCC-------CEEEEeCCCCeee
Q psy4650 101 ----------------DRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDG-------SVRVWHSGTHRLE 157 (381)
Q Consensus 101 ----------------d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~-------~i~vwd~~~~~~~ 157 (381)
...|.+||+.+++.+..+.. . .+..++|+|+| .++++..++ ...+|.+.+++..
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 211 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE 211 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE
T ss_pred cccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE
Confidence 25788999998876455544 3 77899999999 777776542 3455544455543
Q ss_pred EEEecCCcceEEEEEcCCCCEEEEEeCC
Q psy4650 158 ISLTYGLERVWTISSLKGSNNVAIGYDE 185 (381)
Q Consensus 158 ~~~~~~~~~v~~v~~~~~~~~l~~~~~d 185 (381)
.+..+ ..+..+ +|+|+.++.++.+
T Consensus 212 -~l~~~-~~~~~~--spdg~~l~~~~~~ 235 (347)
T 2gop_A 212 -KMFEK-VSFYAV--DSDGERILLYGKP 235 (347)
T ss_dssp -EEEEE-ESEEEE--EECSSCEEEEECC
T ss_pred -EeccC-cceeeE--CCCCCEEEEEEcc
Confidence 33333 445444 8999988877754
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.64 E-value=3.5e-06 Score=73.65 Aligned_cols=150 Identities=7% Similarity=0.054 Sum_probs=103.6
Q ss_pred cceeeeecCCCceEEEEEecC---------------CeEEEecCCCccceeeEeeccccccEEEEEee----eCCCccEE
Q psy4650 35 TKVDITTNKDMIEYKISYQES---------------SRVKAFNPIQVATLILKTLYGHEKGVNCVDYY----HGGDKPYL 95 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d---------------~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~----~~~~~~~l 95 (381)
.+..+...+++. +.++...+ +.+..|++.. . ...+..+......++|+ |++.. ++
T Consensus 118 ~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g---~-~~~~~~~~~~~~~i~~~~~~d~dg~~-l~ 191 (314)
T 1pjx_A 118 GCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG---Q-MIQVDTAFQFPNGIAVRHMNDGRPYQ-LI 191 (314)
T ss_dssp CCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS---C-EEEEEEEESSEEEEEEEECTTSCEEE-EE
T ss_pred CCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCCC---C-EEEeccCCCCcceEEEecccCCCCCE-EE
Confidence 466777777754 44554443 5777887641 1 12233344567889999 87642 45
Q ss_pred EEEcCCCeEEEEECC-CCe-----EEEEeccCC-CCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceE
Q psy4650 96 ISGADDRLVKIWDYQ-NKT-----CVQTLEGHG-QNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVW 168 (381)
Q Consensus 96 ~s~~~d~~v~vwd~~-~~~-----~~~~~~~~~-~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~ 168 (381)
++...++.|.+|+.. ++. ....+.++. .....++++++|.++++...++.|.+||..+++....+..+...+.
T Consensus 192 v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 271 (314)
T 1pjx_A 192 VAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPS 271 (314)
T ss_dssp EEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEE
T ss_pred EEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCce
Confidence 566678999999976 443 223344443 5678899999999888887888999999987877777776667899
Q ss_pred EEEEcCCCCEEEEE-eCCCeEEE
Q psy4650 169 TISSLKGSNNVAIG-YDEGSVLL 190 (381)
Q Consensus 169 ~v~~~~~~~~l~~~-~~dg~v~i 190 (381)
+++++|+|..|..+ ..++.+..
T Consensus 272 ~i~~~~dg~~l~v~~~~~~~l~~ 294 (314)
T 1pjx_A 272 NLHFKPQTKTIFVTEHENNAVWK 294 (314)
T ss_dssp EEEECTTSSEEEEEETTTTEEEE
T ss_pred eEEECCCCCEEEEEeCCCCeEEE
Confidence 99999999855544 44566655
No 206
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.63 E-value=3.2e-09 Score=95.94 Aligned_cols=146 Identities=14% Similarity=0.068 Sum_probs=78.2
Q ss_pred eEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCC-E
Q psy4650 47 EYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQN-I 125 (381)
Q Consensus 47 ~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~-v 125 (381)
..++.++.|+.++.||..+ ...+..+.. +.+.+..+..++. .+++++.|+.|..||..+|+.+..+..+... +
T Consensus 10 ~~v~~gs~dg~v~a~d~~t--G~~~W~~~~--~~~~s~p~~~~g~--~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRT--GSIKWTLKE--DPVLQVPTHVEEP--AFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp TEEEEEETTSEEEEEETTT--CCEEEEEEC--CCSCCCC-----C--CEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred CEEEEEcCCCEEEEEECCC--CCEEEEecC--CCceecceEcCCC--EEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 4678889999999999864 445555554 4555555555544 5777889999999999998876666533211 1
Q ss_pred E-EEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecC
Q psy4650 126 S-AVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVN 204 (381)
Q Consensus 126 ~-~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~ 204 (381)
. +..+. .+..+++++.|+.+..||..+|+.++.+..+. ...++|.+..+++++.++.+.. ||..
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a----------~d~~ 148 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITM----------YDTK 148 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEEC----------CCSS
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEE----------EECC
Confidence 0 00011 34466777889999999999999988776543 2345667788888888888887 8888
Q ss_pred CCEEEEEec
Q psy4650 205 GCKIIWARH 213 (381)
Q Consensus 205 ~~~~~~~~~ 213 (381)
+|..+|...
T Consensus 149 tG~~~W~~~ 157 (369)
T 2hz6_A 149 TRELRWNAT 157 (369)
T ss_dssp SSSCCCEEE
T ss_pred CCCEEEeEe
Confidence 888888754
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.63 E-value=1.4e-05 Score=69.11 Aligned_cols=150 Identities=9% Similarity=-0.046 Sum_probs=104.3
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
..+..+...+++. +.++...++.|.+|++. .. .....+..+...+.++.+.+++. +.++...++.|..+|.. +.
T Consensus 20 ~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~-~~-~~~~~~~~~~~~~~~i~~~~~g~--l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 20 SGPYGITSSEDGK-VWFTQHKANKISSLDQS-GR-IKEFEVPTPDAKVMCLIVSSLGD--IWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp CCEEEEEECTTSC-EEEEETTTTEEEEECTT-SC-EEEEECSSTTCCEEEEEECTTSC--EEEEETTTTEEEEECTT-SC
T ss_pred CCcceeeECCCCC-EEEEcCCCCeEEEECCC-Cc-eEEEECCCCCCcceeEEECCCCC--EEEEecCCCeEEEECCC-CC
Confidence 4567787777644 55565667899999986 22 21223344456789999988765 66676678899999987 54
Q ss_pred EE-EEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeE-EEecCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 114 CV-QTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEI-SLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 114 ~~-~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~-~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
.. ..+......+.++++.+++.++++...++.|..||.. ++... .+......+..+++.++|++.++...++.+..
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 171 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGR 171 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred eEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEE
Confidence 32 2223234678999999999888877768889999987 55442 23334457889999999986666665677776
No 208
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.62 E-value=1.7e-06 Score=76.60 Aligned_cols=159 Identities=8% Similarity=-0.027 Sum_probs=106.6
Q ss_pred cceeeeecCCCceEEEEEe-cCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCC----------Ce
Q psy4650 35 TKVDITTNKDMIEYKISYQ-ESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADD----------RL 103 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~-~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d----------~~ 103 (381)
.+..+.. ++..+.++.. .+++|.+||+.. ...+..+.. ......+.++|++. +++++..+ +.
T Consensus 132 ~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t--~~~~~~i~~-g~~p~~i~~~~dG~--l~v~~~~~~~~~~~~~~~~~ 204 (328)
T 3dsm_A 132 STEQMVQ--YGKYVYVNCWSYQNRILKIDTET--DKVVDELTI-GIQPTSLVMDKYNK--MWTITDGGYEGSPYGYEAPS 204 (328)
T ss_dssp BCCCEEE--ETTEEEEEECTTCCEEEEEETTT--TEEEEEEEC-SSCBCCCEECTTSE--EEEEBCCBCTTCSSCBCCCE
T ss_pred CcceEEE--ECCEEEEEcCCCCCEEEEEECCC--CeEEEEEEc-CCCccceEEcCCCC--EEEEECCCccCCccccCCce
Confidence 3444444 2234444444 588999999874 334444443 23346788888765 56666554 79
Q ss_pred EEEEECCCCeEEEEeccC-CCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEE--EecCCcceEEEEEcC-CCCEE
Q psy4650 104 VKIWDYQNKTCVQTLEGH-GQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEIS--LTYGLERVWTISSLK-GSNNV 179 (381)
Q Consensus 104 v~vwd~~~~~~~~~~~~~-~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~--~~~~~~~v~~v~~~~-~~~~l 179 (381)
|.++|..+++....+... ......++|+|++..+..+.. .|.+||..+++.... +.........++++| ++.+.
T Consensus 205 v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~ly 282 (328)
T 3dsm_A 205 LYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVY 282 (328)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEE
T ss_pred EEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEE
Confidence 999999999877666532 235799999999998877654 899999988875321 111235688999999 56666
Q ss_pred EEE----eCCCeEEEEecCCCceEEEecCCCEEEEEec
Q psy4650 180 AIG----YDEGSVLLKVGREEPAVSMDVNGCKIIWARH 213 (381)
Q Consensus 180 ~~~----~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~ 213 (381)
++. ..++.|.+ ||.. ++.++.+.
T Consensus 283 va~~~~y~~~~~V~v----------~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 283 VADAIDYQQQGIVYR----------YSPQ-GKLIDEFY 309 (328)
T ss_dssp EEECTTSSSEEEEEE----------ECTT-CCEEEEEE
T ss_pred EEcccccccCCEEEE----------ECCC-CCEEEEEE
Confidence 665 56788888 7776 66666553
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.60 E-value=2.1e-06 Score=78.54 Aligned_cols=201 Identities=12% Similarity=0.021 Sum_probs=118.2
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCC--eEEEEECCC
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDR--LVKIWDYQN 111 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~--~v~vwd~~~ 111 (381)
..|+.+..++++. +.++...++.|+.|++.. ..+...... ..... ++|+|++. .|+.+..++ .|.+|+...
T Consensus 131 ~~P~~la~d~~g~-lyv~d~~~~~I~~id~~~--g~~~~~~~~-~~~~~-ia~~~~g~--~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-VLAYQRDDPRVRLISVDD--NKVTTVHPG-FKGGK-PAVTKDKQ--RVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCEEEEEECSTTE-EEEEETTTTEEEEEETTT--TEEEEEEET-CCBCB-CEECTTSS--EEEEEBSSTTCEEEEEEGGG
T ss_pred CCceEEEEeCCCC-EEEEecCCCcEEEEECCC--CEEEEeecc-CCCCc-eeEecCCC--cEEEEecCCCceEEEEEcCC
Confidence 4677888887644 666667778999999863 222222222 22233 88998876 677776655 788888876
Q ss_pred CeEEEEe----ccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEE----EecCCcce-E-EEEEcCC-CCEEE
Q psy4650 112 KTCVQTL----EGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEIS----LTYGLERV-W-TISSLKG-SNNVA 180 (381)
Q Consensus 112 ~~~~~~~----~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~----~~~~~~~v-~-~v~~~~~-~~~l~ 180 (381)
+.....+ ......+.+++++|++..|..+..++.|..||..++..... ..+..... . .++|+|+ +.+++
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 6443333 21345678899999555555577788999999987753322 11111111 2 8899985 55555
Q ss_pred EEeCCCeEEEEecCCCceEEEecCCCEEEEEecC-cee------ecccccCCccccccCCceEEeeeh-HHHHHhccCC
Q psy4650 181 IGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHS-EVQ------QANLKTMPEVFENITAGVVLTLSV-HVTIKYRLDI 251 (381)
Q Consensus 181 ~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~dg~~l~~~~-~d~~~~~~d~ 251 (381)
+...++.|+. |+.++......... ... .......+..+++.++|.+.++.. ...++..+++
T Consensus 284 ~d~~~~~I~~----------~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 284 SDQNLSSVYK----------ITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDI 352 (409)
T ss_dssp EETTTTEEEE----------ECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEET
T ss_pred EeCCCCEEEE----------EecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEEC
Confidence 5556666666 66554432222111 000 000012233367788888666655 5556666653
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.58 E-value=2.7e-05 Score=67.27 Aligned_cols=150 Identities=10% Similarity=0.027 Sum_probs=102.5
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
..+..+...+++ .+.++...++.|..|++.. . .....+......+.++++.+++. +.++...++.|..+|.. +.
T Consensus 62 ~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~g-~-~~~~~~~~~~~~~~~i~~~~~g~--l~v~~~~~~~i~~~~~~-g~ 135 (300)
T 2qc5_A 62 AKVMCLIVSSLG-DIWFTENGANKIGKLSKKG-G-FTEYPLPQPDSGPYGITEGLNGD--IWFTQLNGDRIGKLTAD-GT 135 (300)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTTS-C-EEEEECSSTTCCEEEEEECSTTC--EEEEETTTTEEEEECTT-SC
T ss_pred CcceeEEECCCC-CEEEEecCCCeEEEECCCC-C-eEEecCCCCCCCCccceECCCCC--EEEEccCCCeEEEECCC-CC
Confidence 456677777664 4556666678899999862 2 22223333456789999988765 66777778899999987 54
Q ss_pred EE-EEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeE-EEecCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 114 CV-QTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEI-SLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 114 ~~-~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~-~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
.. ..+......+.++++.+++..+++...++.|..||. +++... ........+..+++.++|.+.++....+.+..
T Consensus 136 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 213 (300)
T 2qc5_A 136 IYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGR 213 (300)
T ss_dssp EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred EEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEE
Confidence 43 223334457899999999997776666788999998 555433 12233456889999998887776666666776
No 211
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.54 E-value=2.5e-06 Score=83.62 Aligned_cols=150 Identities=9% Similarity=-0.088 Sum_probs=98.9
Q ss_pred eeeeecCCCceEEEEEecCCe-------------EEEecCCCccc--eeeEeeccccccEEEEEeeeCCCccEEEEEcCC
Q psy4650 37 VDITTNKDMIEYKISYQESSR-------------VKAFNPIQVAT--LILKTLYGHEKGVNCVDYYHGGDKPYLISGADD 101 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~~-------------v~i~~~~~~~~--~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d 101 (381)
..+.+.+++. .++.++.+.. |++|++.+... ..+....+|...+.++.|+|+|. +|+.++.+
T Consensus 171 ~~~~wspDg~-~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~--~l~~~~~~ 247 (695)
T 2bkl_A 171 ATPKWTPDSK-GFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGK--YLFVYILR 247 (695)
T ss_dssp CCCEECTTSS-EEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSC--CEEEEEEE
T ss_pred cceEEecCCC-EEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCC--EEEEEEeC
Confidence 4677777755 4555555554 99999875432 34455556777899999999987 56655555
Q ss_pred C----eEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEe---CCCCEEEEeCCCCee--eEEE-ecC-CcceEEE
Q psy4650 102 R----LVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGS---EDGSVRVWHSGTHRL--EISL-TYG-LERVWTI 170 (381)
Q Consensus 102 ~----~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~---~d~~i~vwd~~~~~~--~~~~-~~~-~~~v~~v 170 (381)
+ .|.+|+..++. ...+..+...+....| ++|..++.+. .++.|.+||+.++.. ...+ ..+ ...+..+
T Consensus 248 ~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~ 325 (695)
T 2bkl_A 248 GWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSV 325 (695)
T ss_dssp TTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEE
T ss_pred CCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEE
Confidence 4 66777665554 3344445555666666 5555444443 257899999987653 2333 333 4467888
Q ss_pred EEcCCCCEEEEEeCCCeEEEEe
Q psy4650 171 SSLKGSNNVAIGYDEGSVLLKV 192 (381)
Q Consensus 171 ~~~~~~~~l~~~~~dg~v~i~~ 192 (381)
+++ ++.++++...|+..++|.
T Consensus 326 ~~~-~~~lv~~~~~dg~~~l~~ 346 (695)
T 2bkl_A 326 SIV-GGHLSLEYLKDATSEVRV 346 (695)
T ss_dssp EEE-TTEEEEEEEETTEEEEEE
T ss_pred EEE-CCEEEEEEEECCEEEEEE
Confidence 888 677888888999998865
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.54 E-value=4.5e-06 Score=74.82 Aligned_cols=148 Identities=9% Similarity=-0.036 Sum_probs=101.7
Q ss_pred cceeeeecCCCceEEEEEec----CCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEE---------cCC
Q psy4650 35 TKVDITTNKDMIEYKISYQE----SSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISG---------ADD 101 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~----d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~---------~~d 101 (381)
......+.+++..+.++-.. ++.|.++|+.. ...+.++..-..+ . +.++|++.. ++++. ..+
T Consensus 34 ~~~~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t--~~v~~~I~vG~~P-~-va~spDG~~-lyVan~~~~r~~~G~~~ 108 (386)
T 3sjl_D 34 PRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEA--GRVIGMIDGGFLP-N-PVVADDGSF-IAHASTVFSRIARGERT 108 (386)
T ss_dssp CCBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTT--TEEEEEEEECSSC-E-EEECTTSSC-EEEEEEEEEETTEEEEE
T ss_pred cceeeccCCCCCEEEEEcCcccCCCCEEEEEECCC--CeEEEEEECCCCC-c-EEECCCCCE-EEEEcccccccccCCCC
Confidence 33445566676665555554 67999999863 4566666654455 4 999999884 22332 246
Q ss_pred CeEEEEECCCCeEEEEeccCC-------CCEEEEEEecCCCEEEEEeC--CCCEEEEeCCCCeeeEEEecCCcceEEEEE
Q psy4650 102 RLVKIWDYQNKTCVQTLEGHG-------QNISAVCFHPELPIVITGSE--DGSVRVWHSGTHRLEISLTYGLERVWTISS 172 (381)
Q Consensus 102 ~~v~vwd~~~~~~~~~~~~~~-------~~v~~~~~~p~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~ 172 (381)
+.|.+||..+++.+..+.... ..-..++++|+|+++..+.. ++.|.++|..+++.+.++..... ...+
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~---~~~~ 185 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC---YHIF 185 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEE
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc---ceee
Confidence 789999999999888774321 23467999999998887764 68999999999999988864321 1223
Q ss_pred cCCCCEEEEEeCCCeEEE
Q psy4650 173 LKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 173 ~~~~~~l~~~~~dg~v~i 190 (381)
....+.+++.+.||.+.+
T Consensus 186 P~g~~~~~~~~~DG~~~~ 203 (386)
T 3sjl_D 186 PTAPDTFFMHCRDGSLAK 203 (386)
T ss_dssp EEETTEEEEEETTSCEEE
T ss_pred cCCCceeEEECCCCCEEE
Confidence 333456667777888777
No 213
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.48 E-value=5.4e-05 Score=71.96 Aligned_cols=165 Identities=7% Similarity=-0.038 Sum_probs=113.4
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEee----eCCCccEEEEEcCCCeEEEEECC
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYY----HGGDKPYLISGADDRLVKIWDYQ 110 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~----~~~~~~~l~s~~~d~~v~vwd~~ 110 (381)
.++.+..+++ +.+++.++.++.|.+||+.......+..+.... ....++|+ |+|.. ++++...+++|.++|..
T Consensus 198 ~p~~v~~SpD-Gr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~-l~v~n~~~~~v~ViD~~ 274 (567)
T 1qks_A 198 AVHISRLSAS-GRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKY-AIAGAYWPPQYVIMDGE 274 (567)
T ss_dssp CEEEEEECTT-SCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTE-EEEEEEETTEEEEEETT
T ss_pred CccceEECCC-CCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCE-EEEEEccCCeEEEEECC
Confidence 3456677776 457777889999999998522334555665433 35789999 68763 44555667999999999
Q ss_pred CCeEEEEecc----------CCC-CEEEEEEecCCCE-EEEEeCCCCEEEEeCCCCeeeEEE-ecCCcceEEEEEcCCCC
Q psy4650 111 NKTCVQTLEG----------HGQ-NISAVCFHPELPI-VITGSEDGSVRVWHSGTHRLEISL-TYGLERVWTISSLKGSN 177 (381)
Q Consensus 111 ~~~~~~~~~~----------~~~-~v~~~~~~p~~~~-l~s~~~d~~i~vwd~~~~~~~~~~-~~~~~~v~~v~~~~~~~ 177 (381)
+.+.+..+.. |.. .+..+..++++.. +++...+|.|.++|..+...+... .........+.|+|+|+
T Consensus 275 t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr 354 (567)
T 1qks_A 275 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHR 354 (567)
T ss_dssp TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSC
T ss_pred CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCC
Confidence 9988777642 112 5778888888774 455566899999999765432221 12334566789999999
Q ss_pred EEEEEe-CCCeEEEEecCCCceEEEecCCCEEEEEe
Q psy4650 178 NVAIGY-DEGSVLLKVGREEPAVSMDVNGCKIIWAR 212 (381)
Q Consensus 178 ~l~~~~-~dg~v~i~~~~~~~~~~~d~~~~~~~~~~ 212 (381)
++.++. .++.+.+ +|..+++++...
T Consensus 355 ~~~va~~~sn~V~V----------iD~~t~kl~~~i 380 (567)
T 1qks_A 355 YFITAANARNKLVV----------IDTKEGKLVAIE 380 (567)
T ss_dssp EEEEEEGGGTEEEE----------EETTTTEEEEEE
T ss_pred EEEEEeCCCCeEEE----------EECCCCcEEEEE
Confidence 876655 5677777 777777766554
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.48 E-value=2.3e-05 Score=68.18 Aligned_cols=192 Identities=9% Similarity=0.009 Sum_probs=113.5
Q ss_pred eeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEE
Q psy4650 38 DITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 117 (381)
Q Consensus 38 ~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~ 117 (381)
.....++...++++...++.|..|++..... ..+ .+...+.++++++++. ++++. +..|.+||..++.....
T Consensus 17 gp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~---~~~-~~~~~~~~i~~~~dG~--l~v~~--~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 17 SPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV---QRV-TMDAPVSSVALRQSGG--YVATI--GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTCCE---EEE-ECSSCEEEEEEBTTSS--EEEEE--TTEEEEEETTTTEEEEE
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECCCCcE---EEE-eCCCceEEEEECCCCC--EEEEE--CCeEEEEECCCCcEEEE
Confidence 4455665566777778889999999864322 222 3456799999999876 45443 56899999988864332
Q ss_pred ecc----CCCCEEEEEEecCCCEEEEEeC---------CCCEEEEeCCC-CeeeEEEecCCcceEEEEEcCCCCEEE-EE
Q psy4650 118 LEG----HGQNISAVCFHPELPIVITGSE---------DGSVRVWHSGT-HRLEISLTYGLERVWTISSLKGSNNVA-IG 182 (381)
Q Consensus 118 ~~~----~~~~v~~~~~~p~~~~l~s~~~---------d~~i~vwd~~~-~~~~~~~~~~~~~v~~v~~~~~~~~l~-~~ 182 (381)
... ....+..++++|+|.++++... ...-.+|.+.. +... .+.........++|+|+++.+. +.
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~~~~~~~pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK-KYFDQVDISNGLDWSLDHKIFYYID 167 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE-EEEEEESBEEEEEECTTSCEEEEEE
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE-EEeeccccccceEEcCCCCEEEEec
Confidence 221 1234788999999997665432 13345555543 3332 2322334567899999998664 44
Q ss_pred eCCCeEEEEecCCCceEEEecCCCEE-----EEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCC
Q psy4650 183 YDEGSVLLKVGREEPAVSMDVNGCKI-----IWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 183 ~~dg~v~i~~~~~~~~~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~ 252 (381)
+.++.|..+. +|..++.+ +..... ..+....+++.++|.+.+.......+..++..
T Consensus 168 ~~~~~i~~~~--------~d~~~G~~~~~~~~~~~~~------~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 168 SLSYSVDAFD--------YDLQTGQISNRRSVYKLEK------EEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp GGGTEEEEEE--------ECTTTCCEEEEEEEEECCG------GGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred CCCCcEEEEe--------ccCCCCcccCcEEEEECCC------CCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 5567777733 22234432 111110 11122235566788655555555556667764
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.43 E-value=2.3e-05 Score=71.60 Aligned_cols=147 Identities=8% Similarity=-0.061 Sum_probs=92.5
Q ss_pred eeecCCCceEEEEEecCC--eEEEecCCCccc-eeeEeecc-ccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE
Q psy4650 39 ITTNKDMIEYKISYQESS--RVKAFNPIQVAT-LILKTLYG-HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114 (381)
Q Consensus 39 i~~~~~~~~~~~s~~~d~--~v~i~~~~~~~~-~~~~~l~~-h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 114 (381)
+...+++. .++.+..++ .|..|++..... ..+..+.. +...+.+++++|++. .|..+..++.|..||..++..
T Consensus 176 ia~~~~g~-~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g--~lyv~d~~~~I~~~d~~~~~~ 252 (409)
T 3hrp_A 176 PAVTKDKQ-RVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEE--WLYFVDSNKNFGRFNVKTQEV 252 (409)
T ss_dssp CEECTTSS-EEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSS--EEEEECTTCEEEEEETTTCCE
T ss_pred eeEecCCC-cEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCC--eEEEEECCCcEEEEECCCCCE
Confidence 55565544 555555544 788888753221 11111222 456778899998433 344467789999999987753
Q ss_pred EEE----eccCCCCE--EEEEEecC-CCEEEEEeCCCCEEEEeCCCCeeeEEEecCC---------------cceEEEEE
Q psy4650 115 VQT----LEGHGQNI--SAVCFHPE-LPIVITGSEDGSVRVWHSGTHRLEISLTYGL---------------ERVWTISS 172 (381)
Q Consensus 115 ~~~----~~~~~~~v--~~~~~~p~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~---------------~~v~~v~~ 172 (381)
... ..++...- ..++|+|+ +.++++-..++.|+.||.... ...+.++. .....+++
T Consensus 253 ~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~ 330 (409)
T 3hrp_A 253 TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTV 330 (409)
T ss_dssp EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEE
T ss_pred EEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEE
Confidence 322 22222222 39999995 555566666889999998654 22333221 34788999
Q ss_pred cCCCCEEEEEe-CCCeEEE
Q psy4650 173 LKGSNNVAIGY-DEGSVLL 190 (381)
Q Consensus 173 ~~~~~~l~~~~-~dg~v~i 190 (381)
+|+|.++++-+ .++.|+.
T Consensus 331 d~dG~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 331 DEDGNFYIVDGFKGYCLRK 349 (409)
T ss_dssp CTTCCEEEEETTTTCEEEE
T ss_pred eCCCCEEEEeCCCCCEEEE
Confidence 99998777776 7788877
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.41 E-value=3.3e-05 Score=67.16 Aligned_cols=145 Identities=14% Similarity=0.104 Sum_probs=99.6
Q ss_pred cceeeeecCCCceEEEEEec----------CCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeE
Q psy4650 35 TKVDITTNKDMIEYKISYQE----------SSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLV 104 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~----------d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v 104 (381)
.+.++...+++.-++.+... .+.+..+++.. . +..+..+......++|+|++.. ++++.+.++.|
T Consensus 99 ~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g---~-~~~~~~~~~~pngi~~spdg~~-lyv~~~~~~~i 173 (297)
T 3g4e_A 99 RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH---H-VKKYFDQVDISNGLDWSLDHKI-FYYIDSLSYSV 173 (297)
T ss_dssp EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS---C-EEEEEEEESBEEEEEECTTSCE-EEEEEGGGTEE
T ss_pred CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC---C-EEEEeeccccccceEEcCCCCE-EEEecCCCCcE
Confidence 45677778775544433322 23455555431 1 2223334456789999998863 45677778999
Q ss_pred EEEEC--CCCeE-----EEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEc-CCC
Q psy4650 105 KIWDY--QNKTC-----VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSL-KGS 176 (381)
Q Consensus 105 ~vwd~--~~~~~-----~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~-~~~ 176 (381)
.+|++ .++.. ...+..+.+....+++.++|.+.++...++.|..||..+|+.+..+..+...+++++|. |++
T Consensus 174 ~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~ 253 (297)
T 3g4e_A 174 DAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNY 253 (297)
T ss_dssp EEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGG
T ss_pred EEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCC
Confidence 99987 45532 22233344567889999999988888778889999999999988888777789999998 787
Q ss_pred CEEEEEeC
Q psy4650 177 NNVAIGYD 184 (381)
Q Consensus 177 ~~l~~~~~ 184 (381)
+.|..++.
T Consensus 254 ~~L~vt~~ 261 (297)
T 3g4e_A 254 SEMYVTCA 261 (297)
T ss_dssp CEEEEEEB
T ss_pred CEEEEEcC
Confidence 76655543
No 217
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.40 E-value=1.7e-05 Score=78.38 Aligned_cols=149 Identities=8% Similarity=-0.087 Sum_probs=96.6
Q ss_pred eeeecCCCceEEEEEecCC--------------eEEEecCCCccc--eeeEeeccccccEEEEEeeeCCCccEEEEEcCC
Q psy4650 38 DITTNKDMIEYKISYQESS--------------RVKAFNPIQVAT--LILKTLYGHEKGVNCVDYYHGGDKPYLISGADD 101 (381)
Q Consensus 38 ~i~~~~~~~~~~~s~~~d~--------------~v~i~~~~~~~~--~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d 101 (381)
.+.+.++ ..++++. .++ .|++|++.+... ..+....+|...+.++.|+|+|. +|+..+.+
T Consensus 213 ~~~wspD-~~l~~~~-~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~--~l~~~~~~ 288 (741)
T 1yr2_A 213 GLAWLGN-DALLYSR-FAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGR--WVVITSSE 288 (741)
T ss_dssp CCEESTT-SEEEEEE-CCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC--EEEEEEEC
T ss_pred cEEEECC-CEEEEEE-ecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCC--EEEEEEEc
Confidence 5567777 5444444 333 388898854332 23333444555689999999887 56655543
Q ss_pred -----CeEEEEECCCC--eEEEEeccCCCCEEEEEEecCCCEEEEEeC----CCCEEEEeCCCC--eeeEEEecCCcceE
Q psy4650 102 -----RLVKIWDYQNK--TCVQTLEGHGQNISAVCFHPELPIVITGSE----DGSVRVWHSGTH--RLEISLTYGLERVW 168 (381)
Q Consensus 102 -----~~v~vwd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~----d~~i~vwd~~~~--~~~~~~~~~~~~v~ 168 (381)
..|.+||+.++ .+...+..+...+... ++|+|..++..+. ++.|.+||+.++ .....+..+...+.
T Consensus 289 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~ 367 (741)
T 1yr2_A 289 GTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLE 367 (741)
T ss_dssp TTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEE
T ss_pred cCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEE
Confidence 48999999877 3134454455454544 3588888777765 345999999874 33444444555566
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEe
Q psy4650 169 TISSLKGSNNVAIGYDEGSVLLKV 192 (381)
Q Consensus 169 ~v~~~~~~~~l~~~~~dg~v~i~~ 192 (381)
.+.++ ++.++++...|+..++|.
T Consensus 368 ~~~~~-~~~lv~~~~~dg~~~l~~ 390 (741)
T 1yr2_A 368 SVGIA-GNRLFASYIHDAKSQVLA 390 (741)
T ss_dssp EEEEE-BTEEEEEEEETTEEEEEE
T ss_pred EEEEE-CCEEEEEEEECCEEEEEE
Confidence 77887 566788888899888865
No 218
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.39 E-value=5.1e-05 Score=68.75 Aligned_cols=147 Identities=12% Similarity=0.036 Sum_probs=102.2
Q ss_pred CCCceEEEEEecCCeEEEecCCCc--cceeeEeec------c-ccccEEEEEeeeCCCccEEEEEcCC------CeEEEE
Q psy4650 43 KDMIEYKISYQESSRVKAFNPIQV--ATLILKTLY------G-HEKGVNCVDYYHGGDKPYLISGADD------RLVKIW 107 (381)
Q Consensus 43 ~~~~~~~~s~~~d~~v~i~~~~~~--~~~~~~~l~------~-h~~~v~~~~~~~~~~~~~l~s~~~d------~~v~vw 107 (381)
.+....++++..+++|.++|.... ...+..++. . -...-..+...|++ .++++..+ +.+.+.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG---i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA---IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC---EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe---EEEEcCCCcCCCCCCeEEEE
Confidence 455667788899999999998532 224444452 1 11234566777876 45566555 789999
Q ss_pred ECCCCeEEEEeccCCCC---EEEEEEecCCCEEEEEe-------------------CCCCEEEEeCCCCeeeEEEecCC-
Q psy4650 108 DYQNKTCVQTLEGHGQN---ISAVCFHPELPIVITGS-------------------EDGSVRVWHSGTHRLEISLTYGL- 164 (381)
Q Consensus 108 d~~~~~~~~~~~~~~~~---v~~~~~~p~~~~l~s~~-------------------~d~~i~vwd~~~~~~~~~~~~~~- 164 (381)
|..+.+.+..+.....+ ...+.|+|+++.+++.. .+.+|.+||+.+++.+.++....
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 99999988888632221 23578899999888875 26899999999998888887532
Q ss_pred -cceEEEEE--cCCCCEEEEEe------CCCeEEEEe
Q psy4650 165 -ERVWTISS--LKGSNNVAIGY------DEGSVLLKV 192 (381)
Q Consensus 165 -~~v~~v~~--~~~~~~l~~~~------~dg~v~i~~ 192 (381)
.....+.| +|+++++.+++ .++.+.+|.
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~ 286 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWF 286 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEE
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEE
Confidence 34455655 99999877776 456776644
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.37 E-value=2.3e-05 Score=69.78 Aligned_cols=193 Identities=12% Similarity=0.083 Sum_probs=114.1
Q ss_pred hcceeeeecCCCceEEEEEec----CCeEEEecCCCccceeeEeecc------ccccEEEEEeeeCCCccEEEEEc---C
Q psy4650 34 ETKVDITTNKDMIEYKISYQE----SSRVKAFNPIQVATLILKTLYG------HEKGVNCVDYYHGGDKPYLISGA---D 100 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~----d~~v~i~~~~~~~~~~~~~l~~------h~~~v~~~~~~~~~~~~~l~s~~---~ 100 (381)
..++.+..++++.-|++..+. +..|.+||+.+ ...+..+.. +...+..++++|++.. .+++.+ .
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t--g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~-~yvtd~~~~~ 143 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN--NQLSRVIYLPPPITLSNSFVNDLAVDLIHNF-VYISDPAPDD 143 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTT--TEEEEEEECCTTTSCTTCCCCEEEEETTTTE-EEEEECCSGG
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCC--CeEEEEEECChhhcccccccceEEEecCCCE-EEEEcCccCC
Confidence 456778888775544443332 57899999864 233333321 2345688999875442 445655 6
Q ss_pred CCeEEEEECCCCeEEEEeccCC-----------------------------CCEEEEEEecCCCEEEEEeCCCCEEEEeC
Q psy4650 101 DRLVKIWDYQNKTCVQTLEGHG-----------------------------QNISAVCFHPELPIVITGSEDGSVRVWHS 151 (381)
Q Consensus 101 d~~v~vwd~~~~~~~~~~~~~~-----------------------------~~v~~~~~~p~~~~l~s~~~d~~i~vwd~ 151 (381)
++.|.+||..+++..+.+.+|. ..+..++|+|+++.|+.+..++. ++|.+
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l~~~ 222 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SMYRI 222 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eEEEE
Confidence 8899999998887666554421 23578999999998887776653 44544
Q ss_pred CCC-----e-----ee--EEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeec
Q psy4650 152 GTH-----R-----LE--ISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQA 219 (381)
Q Consensus 152 ~~~-----~-----~~--~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 219 (381)
... . .. ....++......++++++|.+.++...++.|.+ ||..++...-.....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~----------~d~~~G~~~~~~~~~---- 288 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGV----------ITSADRAYKLLVTDE---- 288 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEE----------EETTTTEEEEEEECG----
T ss_pred EHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEE----------EECCCCCEEEEEECC----
Confidence 211 0 00 011122334556888898888888888888887 666334321111110
Q ss_pred ccccCCccccccCCceEEeeehHHHH
Q psy4650 220 NLKTMPEVFENITAGVVLTLSVHVTI 245 (381)
Q Consensus 220 ~~~~~~~~~~~~~dg~~l~~~~~d~~ 245 (381)
.......+++.++|..+++.....+
T Consensus 289 -~~~~p~~va~~~~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 289 -KLSWTDSFNFGSDGYLYFDCNQLHH 313 (343)
T ss_dssp -GGSCEEEEEECTTSCEEEEECCGGG
T ss_pred -ceecCCeeEECCCCcEEEEeCcccc
Confidence 0112222566678877766665443
No 220
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.34 E-value=2.8e-05 Score=67.85 Aligned_cols=196 Identities=9% Similarity=0.029 Sum_probs=113.5
Q ss_pred cceeeeecCCCceEEEE-------EecCCeEEEecCCCccceeeEe--eccccccEEEEEeeeC-CCccEEEEEcCCCeE
Q psy4650 35 TKVDITTNKDMIEYKIS-------YQESSRVKAFNPIQVATLILKT--LYGHEKGVNCVDYYHG-GDKPYLISGADDRLV 104 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s-------~~~d~~v~i~~~~~~~~~~~~~--l~~h~~~v~~~~~~~~-~~~~~l~s~~~d~~v 104 (381)
.+..+...+++ .+.++ +..++.|..|++.......+.. ..++...+.++.++++ +. ++++.. ...|
T Consensus 19 ~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~--l~v~~~-~~~l 94 (314)
T 1pjx_A 19 GAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ--LFVADM-RLGL 94 (314)
T ss_dssp TCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE--EEEEET-TTEE
T ss_pred CccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc--EEEEEC-CCCE
Confidence 35566666654 45555 5667899999975422211110 1235677899999987 54 444443 4478
Q ss_pred EEEECCCCeEEEE-ecc----CCCCEEEEEEecCCCEEEEEeCC---------------CCEEEEeCCCCeeeEEEecCC
Q psy4650 105 KIWDYQNKTCVQT-LEG----HGQNISAVCFHPELPIVITGSED---------------GSVRVWHSGTHRLEISLTYGL 164 (381)
Q Consensus 105 ~vwd~~~~~~~~~-~~~----~~~~v~~~~~~p~~~~l~s~~~d---------------~~i~vwd~~~~~~~~~~~~~~ 164 (381)
.+||.. ++.... ... +...+.+++++|+|.++++...+ +.|..||.. ++..... .+.
T Consensus 95 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~ 171 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAF 171 (314)
T ss_dssp EEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEE
T ss_pred EEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCC
Confidence 899988 664433 221 12357899999999877776554 467777765 5443322 233
Q ss_pred cceEEEEEc----CCCCEEEEE-eCCCeEEEEecCCCceEEEecC-CCEE----EEE-ecCceeecccccCCccccccCC
Q psy4650 165 ERVWTISSL----KGSNNVAIG-YDEGSVLLKVGREEPAVSMDVN-GCKI----IWA-RHSEVQQANLKTMPEVFENITA 233 (381)
Q Consensus 165 ~~v~~v~~~----~~~~~l~~~-~~dg~v~i~~~~~~~~~~~d~~-~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~d 233 (381)
.....++++ |+++.+..+ ..++.+.+ ||.. ++.. .+. .... .......+.+.++
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~----------~~~~~~g~~~~~~~~~~~~~~-----~~~~p~~i~~d~~ 236 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWS----------YDIKGPAKIENKKVWGHIPGT-----HEGGADGMDFDED 236 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEE----------EEEEETTEEEEEEEEEECCCC-----SSCEEEEEEEBTT
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEE----------EECCCCCccccceEEEECCCC-----CCCCCCceEECCC
Confidence 456788999 998655444 45677777 5543 2321 111 1100 0011122456678
Q ss_pred ceEEeeehHHHHHhccCCC
Q psy4650 234 GVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 234 g~~l~~~~~d~~~~~~d~~ 252 (381)
|.+.+.....+....|+..
T Consensus 237 G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 237 NNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp CCEEEEEETTTEEEEECTT
T ss_pred CCEEEEEcCCCEEEEEcCC
Confidence 8766665555566667664
No 221
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.32 E-value=6.1e-05 Score=63.27 Aligned_cols=178 Identities=8% Similarity=0.005 Sum_probs=108.7
Q ss_pred ceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCE
Q psy4650 46 IEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNI 125 (381)
Q Consensus 46 ~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v 125 (381)
..+.++.+.+|.|+.+|+.+. ..+..+ -..........+.++. +......++.+.++|..+.+.+.++.....+
T Consensus 65 ~~Ly~stG~~g~v~~iD~~Tg--kv~~~~--l~~~~FgeGit~~g~~-Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG- 138 (268)
T 3nok_A 65 GHFFESTGHQGTLRQLSLESA--QPVWME--RLGNIFAEGLASDGER-LYQLTWTEGLLFTWSGMPPQRERTTRYSGEG- 138 (268)
T ss_dssp TEEEEEETTTTEEEECCSSCS--SCSEEE--ECTTCCEEEEEECSSC-EEEEESSSCEEEEEETTTTEEEEEEECSSCC-
T ss_pred CEEEEEcCCCCEEEEEECCCC--cEEeEE--CCCCcceeEEEEeCCE-EEEEEccCCEEEEEECCcCcEEEEEeCCCce-
Confidence 456677788888999999753 333443 1123333223344553 5556678999999999999999888743322
Q ss_pred EEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCC-----cceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEE
Q psy4650 126 SAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGL-----ERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVS 200 (381)
Q Consensus 126 ~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-----~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~ 200 (381)
..++ +++..|..+..++.|.++|..+.+.+.++.-.. ..++.+.|. +|...+....++.|.+
T Consensus 139 wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~v---------- 205 (268)
T 3nok_A 139 WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLE---------- 205 (268)
T ss_dssp CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEE----------
T ss_pred eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEE----------
Confidence 3333 567777766668899999999998887765321 123445554 4443333334444444
Q ss_pred EecCCCEEEEEecCceee-------cccccCCccccccCCceEEeeehH
Q psy4650 201 MDVNGCKIIWARHSEVQQ-------ANLKTMPEVFENITAGVVLTLSVH 242 (381)
Q Consensus 201 ~d~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~dg~~l~~~~~ 242 (381)
.|+.+++.+-.+...... .........+++.|++..|.+.+.
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 999998876555433211 111122333677887776666553
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.31 E-value=0.00016 Score=65.58 Aligned_cols=192 Identities=11% Similarity=0.037 Sum_probs=121.0
Q ss_pred hcceeeeecCCCceEEEEEecC------CeEEEecCCCccceeeEeecc--cc-ccEEEEEeeeCCCccEEEEEc-----
Q psy4650 34 ETKVDITTNKDMIEYKISYQES------SRVKAFNPIQVATLILKTLYG--HE-KGVNCVDYYHGGDKPYLISGA----- 99 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d------~~v~i~~~~~~~~~~~~~l~~--h~-~~v~~~~~~~~~~~~~l~s~~----- 99 (381)
..|..+.+.+++ +.+++..+ |.+.++|..+ ..++.++.. +. ..-..+.|+|+++ .+++..
T Consensus 138 s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T--~~v~~~~~~~~~~~~~~Yd~~~~p~~~--~mvsS~wg~p~ 211 (462)
T 2ece_A 138 SRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYS--FEPLGKWEIDRGDQYLAYDFWWNLPNE--VLVSSEWAVPN 211 (462)
T ss_dssp EEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTT--CCEEEECCSBCTTCCCCCCEEEETTTT--EEEECBCCCHH
T ss_pred CcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCC--CeEEEEEccCCCCccccceEEECCCCC--EEEEccCcCcc
Confidence 356777888886 55565555 7899999863 345566542 22 2234678899877 677764
Q ss_pred --------------CCCeEEEEECCCCeEEEEeccC--CCCEEEEEE--ecCCCEEEEEe------CCCCEEEEeCCCCe
Q psy4650 100 --------------DDRLVKIWDYQNKTCVQTLEGH--GQNISAVCF--HPELPIVITGS------EDGSVRVWHSGTHR 155 (381)
Q Consensus 100 --------------~d~~v~vwd~~~~~~~~~~~~~--~~~v~~~~~--~p~~~~l~s~~------~d~~i~vwd~~~~~ 155 (381)
...+|.+||+.+++.+.++... ......+.| +|+++++..++ .+++|.+|....|.
T Consensus 212 ~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~ 291 (462)
T 2ece_A 212 TIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK 291 (462)
T ss_dssp HHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE
T ss_pred ccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc
Confidence 4789999999999888777642 123455656 99999766555 56688877665554
Q ss_pred ee--EEE--ecC----------------CcceEEEEEcCCCCEEEEEeC-CCeEEEEecCCCceEEEecC---CCEEEEE
Q psy4650 156 LE--ISL--TYG----------------LERVWTISSLKGSNNVAIGYD-EGSVLLKVGREEPAVSMDVN---GCKIIWA 211 (381)
Q Consensus 156 ~~--~~~--~~~----------------~~~v~~v~~~~~~~~l~~~~~-dg~v~i~~~~~~~~~~~d~~---~~~~~~~ 211 (381)
.. ..+ ... ......+.++|+|++|.++.. .+.|.+ ||.. +.+++-.
T Consensus 292 ~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~Vav----------fdV~d~~~~~lv~~ 361 (462)
T 2ece_A 292 WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQ----------YDISNPFKPVLTGK 361 (462)
T ss_dssp EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEE----------EECSSTTSCEEEEE
T ss_pred eeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEE----------EEecCCCCcEEEEE
Confidence 21 111 110 134678889999998776654 567766 6653 2344433
Q ss_pred ecCceee--------cccccCCccccccCCceEEeeeh
Q psy4650 212 RHSEVQQ--------ANLKTMPEVFENITAGVVLTLSV 241 (381)
Q Consensus 212 ~~~~~~~--------~~~~~~~~~~~~~~dg~~l~~~~ 241 (381)
+...... ..+.+.+..++++|||++|+++.
T Consensus 362 I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 362 VKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 3222100 11223455688999999999877
No 223
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.29 E-value=1.9e-05 Score=77.98 Aligned_cols=149 Identities=11% Similarity=-0.010 Sum_probs=92.7
Q ss_pred eeeeecCCCceEEEEEecCC----eEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCe---------
Q psy4650 37 VDITTNKDMIEYKISYQESS----RVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRL--------- 103 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d~----~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~--------- 103 (381)
..+.+++++..+.++.+.+| +|++||+..... +. ...+...+.++.|+|+ . .|+.++.++.
T Consensus 166 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~--~~-~~~~~~~~~~~~wspD-~--~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 166 DAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP--LA-DELKWVKFSGLAWLGN-D--ALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE--EE-EEEEEEESCCCEESTT-S--EEEEEECCCC--------C
T ss_pred EeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC--CC-ccCCCceeccEEEECC-C--EEEEEEecCcccccccccC
Confidence 35667787665555555444 599999875332 21 1112222357899998 5 5666655543
Q ss_pred -----EEEEECCCCeE--EEEec--cCCCCEEEEEEecCCCEEEEEeCC-----CCEEEEeCCCC--eeeEEEecCCcce
Q psy4650 104 -----VKIWDYQNKTC--VQTLE--GHGQNISAVCFHPELPIVITGSED-----GSVRVWHSGTH--RLEISLTYGLERV 167 (381)
Q Consensus 104 -----v~vwd~~~~~~--~~~~~--~~~~~v~~~~~~p~~~~l~s~~~d-----~~i~vwd~~~~--~~~~~~~~~~~~v 167 (381)
|.+|++.++.. ...+. .+...+..+.|+|+|++++..+.+ ..|.+||+.++ .....+..+...+
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 319 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ 319 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce
Confidence 88999877641 23333 333468899999999988776644 38999999887 3144555444444
Q ss_pred EEEEEcCCCCEEEEEeCC----CeEEEEe
Q psy4650 168 WTISSLKGSNNVAIGYDE----GSVLLKV 192 (381)
Q Consensus 168 ~~v~~~~~~~~l~~~~~d----g~v~i~~ 192 (381)
.... +|+|..++..+.+ +.+.+|+
T Consensus 320 ~~~~-~~dg~~l~~~s~~~~~~~~l~~~d 347 (741)
T 1yr2_A 320 WDFV-DGVGDQLWFVSGDGAPLKKIVRVD 347 (741)
T ss_dssp EEEE-EEETTEEEEEECTTCTTCEEEEEE
T ss_pred EEEE-eccCCEEEEEECCCCCCCEEEEEe
Confidence 4443 4888887777653 3365554
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.29 E-value=8.1e-05 Score=64.91 Aligned_cols=144 Identities=10% Similarity=-0.035 Sum_probs=96.0
Q ss_pred eeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEE
Q psy4650 38 DITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 117 (381)
Q Consensus 38 ~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~ 117 (381)
.....+++..++++...++.+..|++.. . ...+..+...+.++.+++++. ++++...++.|..|+.. +.....
T Consensus 49 gp~~~~~g~~l~~~d~~~~~i~~~~~~g-~---~~~~~~~~~~~~gl~~d~dG~--l~v~~~~~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDLVGRRVLGWREDG-T---VDVLLDATAFTNGNAVDAQQR--LVHCEHGRRAITRSDAD-GQAHLL 121 (305)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEETTS-C---EEEEEESCSCEEEEEECTTSC--EEEEETTTTEEEEECTT-SCEEEE
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEeCCC-C---EEEEeCCCCccceeeECCCCC--EEEEECCCCEEEEECCC-CCEEEE
Confidence 4455666555777888889999998732 2 234455667889999999776 66666667889999986 543222
Q ss_pred ec---cC-CCCEEEEEEecCCCEEEE----EeC-------------CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCC
Q psy4650 118 LE---GH-GQNISAVCFHPELPIVIT----GSE-------------DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGS 176 (381)
Q Consensus 118 ~~---~~-~~~v~~~~~~p~~~~l~s----~~~-------------d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~ 176 (381)
.. +. ...+..++++|+|.++++ |.. .+.|..||..+++..... .......++|+|++
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg 199 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDE 199 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTS
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCC
Confidence 11 11 124567999999998876 321 245777787666654333 33456789999999
Q ss_pred CEEEEEeCC------CeEEE
Q psy4650 177 NNVAIGYDE------GSVLL 190 (381)
Q Consensus 177 ~~l~~~~~d------g~v~i 190 (381)
+.|..+... +.+..
T Consensus 200 ~~lyv~~~~~~~~~~~~i~~ 219 (305)
T 3dr2_A 200 QTLYVSQTPEQGHGSVEITA 219 (305)
T ss_dssp SEEEEEECCC---CCCEEEE
T ss_pred CEEEEEecCCcCCCCCEEEE
Confidence 977776654 45655
No 225
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.28 E-value=0.00011 Score=66.11 Aligned_cols=123 Identities=11% Similarity=-0.011 Sum_probs=85.7
Q ss_pred eEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEc----------CCCeEEEEECCCCeEEEEeccC-----
Q psy4650 57 RVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGA----------DDRLVKIWDYQNKTCVQTLEGH----- 121 (381)
Q Consensus 57 ~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~----------~d~~v~vwd~~~~~~~~~~~~~----- 121 (381)
+|.+||+.. ...+..+.....+ .+.++|++. +++.+. .++.|.+||..+.+.+..+...
T Consensus 48 ~v~v~D~~t--~~~~~~i~~g~~p--~i~~spDg~--~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~ 121 (373)
T 2mad_H 48 QQWVLDAGS--GSILGHVNGGFLP--NPVAAHSGS--EFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRF 121 (373)
T ss_pred EEEEEECCC--CeEEEEecCCCCC--CeEECCCCC--EEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccc
Confidence 889999864 3455666544444 999999987 454443 4688999999988877766432
Q ss_pred --CCCEEEEEEecCCCEEEEEeC--CCCEEEEeCCCCeeeEE-EecCCcceEEEEEcCCC-CEEEEEeCCCeEEE
Q psy4650 122 --GQNISAVCFHPELPIVITGSE--DGSVRVWHSGTHRLEIS-LTYGLERVWTISSLKGS-NNVAIGYDEGSVLL 190 (381)
Q Consensus 122 --~~~v~~~~~~p~~~~l~s~~~--d~~i~vwd~~~~~~~~~-~~~~~~~v~~v~~~~~~-~~l~~~~~dg~v~i 190 (381)
...-..+.|+|+|++++.++. ++.|.++| .+++.+.. +.... ++.+.|.+ ..+++.+.||.+.+
T Consensus 122 ~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~dg~~~~ 191 (373)
T 2mad_H 122 DVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT----CYHIHPGAPSTFYLLCAQGGLAK 191 (373)
T ss_pred ccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc----eEEEEeCCCceEEEEcCCCCEEE
Confidence 123458899999998888764 57899999 99988777 54322 24445554 34556667788777
No 226
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.28 E-value=6.5e-08 Score=87.30 Aligned_cols=138 Identities=14% Similarity=0.068 Sum_probs=72.5
Q ss_pred EEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcc-eEEEEE
Q psy4650 94 YLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLER-VWTISS 172 (381)
Q Consensus 94 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-v~~v~~ 172 (381)
.+++++.|+.|..||..+|+.+..+.. +++.+..+.+++..+++++.|+.|..||..+|+.+..+..+... +.+...
T Consensus 11 ~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~ 88 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPC 88 (369)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSC
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCce
Confidence 788999999999999999999888876 45555555667777888889999999999999887766533211 100000
Q ss_pred cCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCC
Q psy4650 173 LKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 173 ~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~ 252 (381)
...+..+++++.++.+.. ||..+|+.+|....... ...+|++..++++..++..+.||..
T Consensus 89 ~~~~~~v~~g~~dg~v~a----------~D~~tG~~~w~~~~~~~----------~~~~p~~~~v~~~~~dg~v~a~d~~ 148 (369)
T 2hz6_A 89 RSSDGILYMGKKQDIWYV----------IDLLTGEKQQTLSSAFA----------DSLSPSTSLLYLGRTEYTITMYDTK 148 (369)
T ss_dssp C-----CCCCEEEEEEEE----------ECCC--------------------------------EEEEEEEEEEECCCSS
T ss_pred EecCCEEEEEeCCCEEEE----------EECCCCcEEEEecCCCc----------ccccccCCEEEEEecCCEEEEEECC
Confidence 012345666777777777 99999999998764321 1223566777777766667777765
Q ss_pred c
Q psy4650 253 D 253 (381)
Q Consensus 253 ~ 253 (381)
.
T Consensus 149 t 149 (369)
T 2hz6_A 149 T 149 (369)
T ss_dssp S
T ss_pred C
Confidence 4
No 227
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.26 E-value=1.9e-05 Score=70.82 Aligned_cols=144 Identities=9% Similarity=0.018 Sum_probs=94.9
Q ss_pred eeeCCCccEEEEEcC----CCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEe----------CCCCEEEEeC
Q psy4650 86 YYHGGDKPYLISGAD----DRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGS----------EDGSVRVWHS 151 (381)
Q Consensus 86 ~~~~~~~~~l~s~~~----d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~----------~d~~i~vwd~ 151 (381)
..|++.. .+++-.. ++.|.+.|..+++.+..+.....+ . ++++|+|+.++.++ .++.|.+||.
T Consensus 40 ~~pd~~~-vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 40 PAPDARR-VYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCTTE-EEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred cCCCCCE-EEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 3566663 3333322 689999999999999988765555 4 99999999776654 3678999999
Q ss_pred CCCeeeEEEecCC-------cceEEEEEcCCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCEEEEEecCceeeccc-
Q psy4650 152 GTHRLEISLTYGL-------ERVWTISSLKGSNNVAIGYD--EGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANL- 221 (381)
Q Consensus 152 ~~~~~~~~~~~~~-------~~v~~v~~~~~~~~l~~~~~--dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~- 221 (381)
.+++.+..+.... .....+.++|+|+++.++.. ++.+.+ +|..+++.+-.+....+....
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsV----------ID~~t~~vv~tI~v~g~~~~~P 186 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGV----------VDLEGKAFKRMLDVPDCYHIFP 186 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEE----------EETTTTEEEEEEECCSEEEEEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEE----------EECCCCcEEEEEECCCcceeec
Confidence 9999888875422 24557899999998888763 678888 677766666554322211000
Q ss_pred ccCCccccccCCceEEeeehH
Q psy4650 222 KTMPEVFENITAGVVLTLSVH 242 (381)
Q Consensus 222 ~~~~~~~~~~~dg~~l~~~~~ 242 (381)
.+....+..++||.++.....
T Consensus 187 ~g~~~~~~~~~DG~~~~v~~~ 207 (386)
T 3sjl_D 187 TAPDTFFMHCRDGSLAKVAFG 207 (386)
T ss_dssp EETTEEEEEETTSCEEEEECC
T ss_pred CCCceeEEECCCCCEEEEECC
Confidence 011111244566666665554
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.26 E-value=8.3e-05 Score=65.58 Aligned_cols=145 Identities=10% Similarity=-0.069 Sum_probs=92.2
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
.-.....++...++++...++.|..|++.... ...+ .+...+.++.|+|++. ++++. .+ .|.+||..+++..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~---~~~~-~~~~~v~~i~~~~dg~--l~v~~-~~-gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGR---KTVH-ALPFMGSALAKISDSK--QLIAS-DD-GLFLRDTATGVLT 122 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTE---EEEE-ECSSCEEEEEEEETTE--EEEEE-TT-EEEEEETTTCCEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCc---EEEE-ECCCcceEEEEeCCCe--EEEEE-CC-CEEEEECCCCcEE
Confidence 34455666656677777788899999986422 1222 2346799999999875 45543 33 4899999888753
Q ss_pred EEecc---C-CCCEEEEEEecCCCEEEEEeC------CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEE-eC
Q psy4650 116 QTLEG---H-GQNISAVCFHPELPIVITGSE------DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIG-YD 184 (381)
Q Consensus 116 ~~~~~---~-~~~v~~~~~~p~~~~l~s~~~------d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~-~~ 184 (381)
..... . ...+..+.++|+|.++++... .+.|..+| +++... +.........++|+|+++.+..+ +.
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETT
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECC
Confidence 32221 1 235789999999997665532 23455555 455433 22233456789999999876554 44
Q ss_pred CCeEEEE
Q psy4650 185 EGSVLLK 191 (381)
Q Consensus 185 dg~v~i~ 191 (381)
++.+.++
T Consensus 200 ~~~I~~~ 206 (326)
T 2ghs_A 200 VNRLMRV 206 (326)
T ss_dssp TCEEEEE
T ss_pred CCEEEEE
Confidence 6777773
No 229
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.23 E-value=3.9e-05 Score=69.90 Aligned_cols=139 Identities=12% Similarity=0.005 Sum_probs=93.2
Q ss_pred CCCceEEEEEecC----CeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEc---------CCCeEEEEEC
Q psy4650 43 KDMIEYKISYQES----SRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGA---------DDRLVKIWDY 109 (381)
Q Consensus 43 ~~~~~~~~s~~~d----~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~---------~d~~v~vwd~ 109 (381)
++...+.++...+ +.|.++|+.. ...+.++.--..+ .+.++|++.. ++++.. .++.|.++|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t--~~vv~~I~vG~~P--gia~SpDgk~-lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGST--GRILGMTDGGFLP--HPVAAEDGSF-FAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTT--TEEEEEEEECSSC--EEEECTTSSC-EEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCC--CEEEEEEECCCCC--ceEECCCCCE-EEEEeccccccccCCCCCEEEEEEC
Confidence 3444444444444 7999999874 4556666544445 8999999884 333321 4679999999
Q ss_pred CCCeEEEEeccC-------CCCEEEEEEecCCCEEEEEeC--CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCC-CEE
Q psy4650 110 QNKTCVQTLEGH-------GQNISAVCFHPELPIVITGSE--DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGS-NNV 179 (381)
Q Consensus 110 ~~~~~~~~~~~~-------~~~v~~~~~~p~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~l 179 (381)
.+++.+..+.-. ......+.++|+|++++.+.. ++.|.+.|..+++.+..+..... ....|.+ ..+
T Consensus 157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~ 232 (426)
T 3c75_H 157 VTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVF 232 (426)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEE
T ss_pred CCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEE
Confidence 999888776421 123467899999998888764 57899999999999888764321 2223332 445
Q ss_pred EEEeCCCeEEE
Q psy4650 180 AIGYDEGSVLL 190 (381)
Q Consensus 180 ~~~~~dg~v~i 190 (381)
++.+.||.+.+
T Consensus 233 v~~~~dG~~~~ 243 (426)
T 3c75_H 233 YMNCRDGSLAR 243 (426)
T ss_dssp EEEETTSSEEE
T ss_pred EEEcCCCCEEE
Confidence 55556666665
No 230
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.22 E-value=0.00027 Score=62.29 Aligned_cols=143 Identities=6% Similarity=-0.033 Sum_probs=93.6
Q ss_pred cceeeeecCCCceEEEEEec-----CCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEEC
Q psy4650 35 TKVDITTNKDMIEYKISYQE-----SSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDY 109 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~-----d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~ 109 (381)
.+.++...+++.-++.+.+. .+.+..++ . .. +..+..+......++|+|++.. +.++.+.++.|.+|++
T Consensus 135 ~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~---g~-~~~~~~~~~~~~~i~~s~dg~~-lyv~~~~~~~I~~~d~ 208 (326)
T 2ghs_A 135 RSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K---GK-VTKLFADISIPNSICFSPDGTT-GYFVDTKVNRLMRVPL 208 (326)
T ss_dssp EEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T---TE-EEEEEEEESSEEEEEECTTSCE-EEEEETTTCEEEEEEB
T ss_pred CCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C---Cc-EEEeeCCCcccCCeEEcCCCCE-EEEEECCCCEEEEEEc
Confidence 45677777775534333221 24555555 2 11 2223333456788999998863 3456667889999998
Q ss_pred C--CC-e-----EEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEc-CCCCEEE
Q psy4650 110 Q--NK-T-----CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSL-KGSNNVA 180 (381)
Q Consensus 110 ~--~~-~-----~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~-~~~~~l~ 180 (381)
. ++ . ....+.........+++.++|.++++...++.|.+||. +++.+..+......+.+++|. |++..|.
T Consensus 209 ~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~ 287 (326)
T 2ghs_A 209 DARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLL 287 (326)
T ss_dssp CTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEE
T ss_pred ccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEE
Confidence 5 55 2 22233334455688999999988777767788999998 567777777666679999998 8877665
Q ss_pred EEeC
Q psy4650 181 IGYD 184 (381)
Q Consensus 181 ~~~~ 184 (381)
+++.
T Consensus 288 vt~~ 291 (326)
T 2ghs_A 288 VTSA 291 (326)
T ss_dssp EEEB
T ss_pred EEec
Confidence 5543
No 231
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.22 E-value=0.0002 Score=60.63 Aligned_cols=197 Identities=5% Similarity=-0.069 Sum_probs=115.1
Q ss_pred eeeeecCCCceEEEEEe-cCCeEEEecCCCccceeeEeec-cccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE
Q psy4650 37 VDITTNKDMIEYKISYQ-ESSRVKAFNPIQVATLILKTLY-GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~-~d~~v~i~~~~~~~~~~~~~l~-~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 114 (381)
.-+...+++.-|+.++. .++.|.++|+.. ...+..+. +.......+.+. +. .+.++...++.+.++|..+.+.
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~t--g~v~~~i~l~~~~fgeGi~~~--g~-~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQT--GKVENIHKMDDSYFGEGLTLL--NE-KLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTT--CCEEEEEECCTTCCEEEEEEE--TT-EEEEEETTCSEEEEEETTTTEE
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCC--CCEEEEEecCCCcceEEEEEe--CC-EEEEEEecCCEEEEEECCCCcE
Confidence 44566665433333332 357999999975 34444443 112233345554 44 2556667899999999999998
Q ss_pred EEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCC-----cceEEEEEcCCCCEEEEEeCCCeEE
Q psy4650 115 VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGL-----ERVWTISSLKGSNNVAIGYDEGSVL 189 (381)
Q Consensus 115 ~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-----~~v~~v~~~~~~~~l~~~~~dg~v~ 189 (381)
+..+..... ....++++|..+..+..++.|.++|..+.+....+.-.. ..++.+.|. +|...+....++.|.
T Consensus 99 ~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~ 175 (266)
T 2iwa_A 99 IKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIA 175 (266)
T ss_dssp EEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred EEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEE
Confidence 888853211 123456688766666678899999999988877775321 135566666 554444444455555
Q ss_pred EEecCCCceEEEecCCCEEEEEecCceeec-------ccccCCccccccCCceEEeeehH-HHHHhccCC
Q psy4650 190 LKVGREEPAVSMDVNGCKIIWARHSEVQQA-------NLKTMPEVFENITAGVVLTLSVH-VTIKYRLDI 251 (381)
Q Consensus 190 i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~dg~~l~~~~~-d~~~~~~d~ 251 (381)
+ .|+.+++.+-.+....... .-......++++|++..+.+... -...+..++
T Consensus 176 v----------ID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 176 R----------ISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp E----------EETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred E----------EECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 5 9998888765554321100 00112223677888766665543 333343333
No 232
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=98.21 E-value=2.2e-06 Score=81.28 Aligned_cols=75 Identities=28% Similarity=0.528 Sum_probs=69.5
Q ss_pred HHhhhhhhhhHhhhccccceeeEeeccccCcceEEeecHHHHHHHHHHHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 306 GLLTSFVQPCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 306 ~l~~~~~~~~~~~Ls~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+...++.+|+.|+....+.++++.+.++.++...++|++||++++++|.+++.+++++|++|++++++|+.|+
T Consensus 261 ~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~Vv 335 (554)
T 1yuw_A 261 RRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIV 335 (554)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEE
T ss_pred HHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEE
Confidence 445678899999999998889999988888889999999999999999999999999999999999999999986
No 233
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.21 E-value=0.00017 Score=60.51 Aligned_cols=178 Identities=10% Similarity=-0.013 Sum_probs=106.1
Q ss_pred eEEEEEecCC--eEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCC
Q psy4650 47 EYKISYQESS--RVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQN 124 (381)
Q Consensus 47 ~~~~s~~~d~--~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~ 124 (381)
.+.++.+.+| .|+.+|+.+ ...+..+.-. .........+.++. +.+....++.+.++|..+.+.+.++.-...
T Consensus 54 ~LyestG~~g~S~v~~vD~~T--gkv~~~~~l~-~~~FgeGit~~g~~-ly~ltw~~~~v~v~D~~t~~~~~ti~~~~e- 128 (262)
T 3nol_A 54 YFYESTGLNGRSSIRKVDIES--GKTLQQIELG-KRYFGEGISDWKDK-IVGLTWKNGLGFVWNIRNLRQVRSFNYDGE- 128 (262)
T ss_dssp EEEEEEEETTEEEEEEECTTT--CCEEEEEECC-TTCCEEEEEEETTE-EEEEESSSSEEEEEETTTCCEEEEEECSSC-
T ss_pred EEEEECCCCCCceEEEEECCC--CcEEEEEecC-CccceeEEEEeCCE-EEEEEeeCCEEEEEECccCcEEEEEECCCC-
Confidence 4455555555 899999975 3344444322 23333333344553 445556789999999999999988874332
Q ss_pred EEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCC-----cceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceE
Q psy4650 125 ISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGL-----ERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAV 199 (381)
Q Consensus 125 v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-----~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~ 199 (381)
...+++++..|..+..++.|.++|..+.+.+.++.... ..++.+.|. +|...+....++.|.+
T Consensus 129 --G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~v--------- 196 (262)
T 3nol_A 129 --GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVR--------- 196 (262)
T ss_dssp --CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE---------
T ss_pred --ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEE---------
Confidence 23334567766655557789999999988887765421 223345554 4444443334444444
Q ss_pred EEecCCCEEEEEecCceeecc------cccCCccccccCCceEEeeehH
Q psy4650 200 SMDVNGCKIIWARHSEVQQAN------LKTMPEVFENITAGVVLTLSVH 242 (381)
Q Consensus 200 ~~d~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~dg~~l~~~~~ 242 (381)
+|+.+|+.+-.+........ .......++++|++..+.+.+.
T Consensus 197 -IDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 197 -IDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp -ECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred -EECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 89998887655543322111 1122333678888777776664
No 234
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=98.20 E-value=1.3e-06 Score=84.38 Aligned_cols=75 Identities=20% Similarity=0.365 Sum_probs=69.1
Q ss_pred HHhhhhhhhhHhhhccccceeeEeeccccCcceEEeecHHHHHHHHHHHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 306 GLLTSFVQPCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 306 ~l~~~~~~~~~~~Ls~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+...++.+|+.|+....+.++++.+.++.++...++|.+|++++++++.+++.+|+++|+++++++++|+.|+
T Consensus 265 ~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~Vv 339 (675)
T 3d2f_A 265 NRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVE 339 (675)
T ss_dssp HHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEE
Confidence 345678899999999988888999988888889999999999999999999999999999999999999999986
No 235
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=98.15 E-value=4.3e-06 Score=76.42 Aligned_cols=75 Identities=23% Similarity=0.395 Sum_probs=69.6
Q ss_pred HHhhhhhhhhHhhhccccceeeEeeccccCcceEEeecHHHHHHHHHHHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 306 GLLTSFVQPCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 306 ~l~~~~~~~~~~~Ls~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+.+.++.+|+.|+....+.+.++.+.++.++...++|.+|++++++++++++.+++++|+++++++.+|+.|+
T Consensus 275 ~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~ 349 (409)
T 4gni_A 275 AKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVI 349 (409)
T ss_dssp HHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred HHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 345567889999999999999999999999999999999999999999999999999999999999999999986
No 236
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=98.14 E-value=4.3e-06 Score=80.12 Aligned_cols=76 Identities=20% Similarity=0.290 Sum_probs=68.1
Q ss_pred HHHhhhhhhhhHhhhccccceeeEeeccccC----cceEEeecHHHHHHHHHHHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 305 GGLLTSFVQPCMHVLSTLQSSNVFVESLYDG----LDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 305 ~~l~~~~~~~~~~~Ls~~~~~~~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
...+...++.+|+.|+....+.+.++.+... .++...++|.+||+++++++.+++.+++++|++|++++.+|++|+
T Consensus 259 ~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~Vv 338 (605)
T 4b9q_A 259 MQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVI 338 (605)
T ss_dssp HHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEE
Confidence 4456788999999999999888888876543 678899999999999999999999999999999999999999986
No 237
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.06 E-value=0.00024 Score=69.21 Aligned_cols=146 Identities=12% Similarity=0.153 Sum_probs=97.6
Q ss_pred eEEEecCCCccceeeEeec--ccc-------ccEEEEEeeeCCC-ccEEEEEcCCCeEEEEECCCCeEEEEeccCC----
Q psy4650 57 RVKAFNPIQVATLILKTLY--GHE-------KGVNCVDYYHGGD-KPYLISGADDRLVKIWDYQNKTCVQTLEGHG---- 122 (381)
Q Consensus 57 ~v~i~~~~~~~~~~~~~l~--~h~-------~~v~~~~~~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~---- 122 (381)
.+..+|+.+. ..+..++ .|. .....+....+|. ...++.++.+|.+.++|..+|+.+..+....
T Consensus 284 sv~AlD~~TG--~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~ 361 (677)
T 1kb0_A 284 SIVALDPDTG--KYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWA 361 (677)
T ss_dssp EEEEECTTTC--CEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE
T ss_pred EEEEEECCCC--CEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcc
Confidence 4888888643 3333332 232 1122223333442 1378899999999999999999877654211
Q ss_pred -------CCE------------------------EEEEEecCCCEEEEEeC-----------------------------
Q psy4650 123 -------QNI------------------------SAVCFHPELPIVITGSE----------------------------- 142 (381)
Q Consensus 123 -------~~v------------------------~~~~~~p~~~~l~s~~~----------------------------- 142 (381)
.++ ..++++|+..++.....
T Consensus 362 ~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 441 (677)
T 1kb0_A 362 SGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWN 441 (677)
T ss_dssp EEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCC
T ss_pred cccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccc
Confidence 011 14688998887765432
Q ss_pred --------------CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEE
Q psy4650 143 --------------DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKI 208 (381)
Q Consensus 143 --------------d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~ 208 (381)
.+.|..||+.+|+.++.+... ..+....+...+..++.++.||.+++ ||..+|+.
T Consensus 442 ~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a----------~D~~tG~~ 510 (677)
T 1kb0_A 442 TAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVA----------YHAATGEK 510 (677)
T ss_dssp CCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEE----------EETTTCCE
T ss_pred cccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEE----------EECCCCce
Confidence 277999999999999888643 23344445566777888888999988 99999999
Q ss_pred EEEecCc
Q psy4650 209 IWARHSE 215 (381)
Q Consensus 209 ~~~~~~~ 215 (381)
+|.....
T Consensus 511 lw~~~~~ 517 (677)
T 1kb0_A 511 LWEAPTG 517 (677)
T ss_dssp EEEEECS
T ss_pred eeeeeCC
Confidence 9987644
No 238
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.06 E-value=0.00018 Score=64.63 Aligned_cols=96 Identities=10% Similarity=-0.065 Sum_probs=73.0
Q ss_pred eEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEe----------CCCCEEEEeCCCCeeeEEEecC-------Cc
Q psy4650 103 LVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGS----------EDGSVRVWHSGTHRLEISLTYG-------LE 165 (381)
Q Consensus 103 ~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~~-------~~ 165 (381)
+|.++|..+++.+..+.....+ .++++|+|+.++.+. .++.|.+||..+.+.+..+... ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 8899999999988887754444 999999999888775 3678999999988887766532 12
Q ss_pred ceEEEEEcCCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCEEEEE
Q psy4650 166 RVWTISSLKGSNNVAIGYD--EGSVLLKVGREEPAVSMDVNGCKIIWA 211 (381)
Q Consensus 166 ~v~~v~~~~~~~~l~~~~~--dg~v~i~~~~~~~~~~~d~~~~~~~~~ 211 (381)
....+.++|+|++|.++.. ++.+.+ +| .+++.+..
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~v----------iD-~t~~~~~~ 162 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGL----------VV-QGGSSDDQ 162 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEE----------EE-CCCCEEeE
Confidence 3557999999999988874 466777 66 66655444
No 239
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.05 E-value=0.00028 Score=61.42 Aligned_cols=182 Identities=9% Similarity=-0.022 Sum_probs=101.6
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeE-eeccc-cccEEEEEeeeCCCccEEEE----EcC--------
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILK-TLYGH-EKGVNCVDYYHGGDKPYLIS----GAD-------- 100 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~-~l~~h-~~~v~~~~~~~~~~~~~l~s----~~~-------- 100 (381)
.+..+...+++. ++++...++.|..|++.. ....+. ...+. ...+.++.+.|+|. +.++ |..
T Consensus 87 ~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~g-~~~~~~~~~~~~~~~~~~~i~~d~dG~--l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 87 FTNGNAVDAQQR-LVHCEHGRRAITRSDADG-QAHLLVGRYAGKRLNSPNDLIVARDGA--IWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp CEEEEEECTTSC-EEEEETTTTEEEEECTTS-CEEEEECEETTEECSCCCCEEECTTSC--EEEECCSGGGSCGGGSCCC
T ss_pred ccceeeECCCCC-EEEEECCCCEEEEECCCC-CEEEEEeccCCCccCCCCCEEECCCCC--EEEeCcCCCcccccccccc
Confidence 355666666644 555555567899999752 211111 11121 13467899998876 5665 332
Q ss_pred -----CCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCC------CCEEEEeCCCCeee--EEE-ecCCcc
Q psy4650 101 -----DRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSED------GSVRVWHSGTHRLE--ISL-TYGLER 166 (381)
Q Consensus 101 -----d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d------~~i~vwd~~~~~~~--~~~-~~~~~~ 166 (381)
.+.|..+|..+++..... .......++|+|++..|+.+... +.|.+||+..+... ..+ ......
T Consensus 163 ~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~ 240 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL 240 (305)
T ss_dssp CCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSC
T ss_pred ccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCC
Confidence 256777777666544333 33456889999999977766554 68999998765411 111 112233
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCCccccccCCceEEeeehH
Q psy4650 167 VWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVH 242 (381)
Q Consensus 167 v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~ 242 (381)
...++++++|++.+ +..+| |.+ |+.. +..+..+.... . ...++|.+++..|++...
T Consensus 241 pdgi~~d~~G~lwv-~~~~g-v~~----------~~~~-g~~~~~~~~~~------~-~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 241 PDGFCVDRGGWLWS-SSGTG-VCV----------FDSD-GQLLGHIPTPG------T-ASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp CCSEEECTTSCEEE-CCSSE-EEE----------ECTT-SCEEEEEECSS------C-CCEEEECTTSCEEEEEET
T ss_pred CCeEEECCCCCEEE-ecCCc-EEE----------ECCC-CCEEEEEECCC------c-eeEEEEeCCCCEEEEEcC
Confidence 44577777777333 33333 444 7774 33333322211 1 111455678877776654
No 240
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.04 E-value=0.00035 Score=68.16 Aligned_cols=146 Identities=11% Similarity=0.137 Sum_probs=95.7
Q ss_pred eEEEecCCCccceeeEeecc--cc-------ccEEEEEeeeCCC-ccEEEEEcCCCeEEEEECCCCeEEEEeccCC-CC-
Q psy4650 57 RVKAFNPIQVATLILKTLYG--HE-------KGVNCVDYYHGGD-KPYLISGADDRLVKIWDYQNKTCVQTLEGHG-QN- 124 (381)
Q Consensus 57 ~v~i~~~~~~~~~~~~~l~~--h~-------~~v~~~~~~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~-~~- 124 (381)
.+..+|+.+. ..+..++. |. ..........++. ...++.++.+|.+.++|..+|+.+....... ..
T Consensus 276 ~v~AlD~~TG--~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~ 353 (689)
T 1yiq_A 276 SIVAVNADTG--EYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWT 353 (689)
T ss_dssp EEEEEETTTC--CEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE
T ss_pred eEEEEEccCC--ceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccc
Confidence 3888888743 33343332 32 1222222222332 2368899999999999999998774332110 00
Q ss_pred -------------------------------------EEEEEEecCCCEEEEEeC-------------------------
Q psy4650 125 -------------------------------------ISAVCFHPELPIVITGSE------------------------- 142 (381)
Q Consensus 125 -------------------------------------v~~~~~~p~~~~l~s~~~------------------------- 142 (381)
-..++|+|+..++.....
T Consensus 354 ~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g 433 (689)
T 1yiq_A 354 KGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLG 433 (689)
T ss_dssp EEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCS
T ss_pred cccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccC
Confidence 012678888776665421
Q ss_pred --------------------CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEe
Q psy4650 143 --------------------DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMD 202 (381)
Q Consensus 143 --------------------d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d 202 (381)
+|.|..||+.+|+.++.+..+.. ...-.+...+.+++.++.||.++. ||
T Consensus 434 ~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~g~~~tagglvf~gt~dg~l~a----------~D 502 (689)
T 1yiq_A 434 LRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI-FNGGTLSTAGNLVFEGSADGRVIA----------YA 502 (689)
T ss_dssp SEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEE----------EE
T ss_pred ccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC-ccCccceECCCEEEEECCCCcEEE----------EE
Confidence 37799999999999998876532 233345556778888999999998 99
Q ss_pred cCCCEEEEEecCc
Q psy4650 203 VNGCKIIWARHSE 215 (381)
Q Consensus 203 ~~~~~~~~~~~~~ 215 (381)
..+|+.+|.....
T Consensus 503 ~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 503 ADTGEKLWEQPAA 515 (689)
T ss_dssp TTTCCEEEEEECS
T ss_pred CCCCccceeeeCC
Confidence 9999999987644
No 241
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.02 E-value=0.0017 Score=53.94 Aligned_cols=179 Identities=10% Similarity=-0.029 Sum_probs=104.5
Q ss_pred ceEEEEEecC--CeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCC
Q psy4650 46 IEYKISYQES--SRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQ 123 (381)
Q Consensus 46 ~~~~~s~~~d--~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~ 123 (381)
..+..+.+.. +.|+.+|+.+ ...+..+.-. .........+.++. +......++.+.++|..+.+.+.++.....
T Consensus 31 ~~LyestG~~g~S~v~~vD~~t--gkv~~~~~l~-~~~fgeGi~~~~~~-ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~ 106 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLET--GRILQRAEVP-PPYFGAGIVAWRDR-LIQLTWRNHEGFVYDLATLTPRARFRYPGE 106 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTT--CCEEEEEECC-TTCCEEEEEEETTE-EEEEESSSSEEEEEETTTTEEEEEEECSSC
T ss_pred CEEEEECCCCCCceEEEEECCC--CCEEEEEeCC-CCcceeEEEEeCCE-EEEEEeeCCEEEEEECCcCcEEEEEeCCCC
Confidence 3344555554 4899999975 3344443321 12222223334453 555667799999999999999988874332
Q ss_pred CEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCC-----cceEEEEEcCCCCEEEEEeCCCeEEEEecCCCce
Q psy4650 124 NISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGL-----ERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPA 198 (381)
Q Consensus 124 ~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-----~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~ 198 (381)
+ ..+ .+++..|..+..++.|.++|..+.+.+.++.-.. ..++.+.|. +|...+....+..|
T Consensus 107 G-wgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I---------- 172 (243)
T 3mbr_X 107 G-WAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRI---------- 172 (243)
T ss_dssp C-CEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEE----------
T ss_pred c-eEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeE----------
Confidence 2 344 4567766666568899999999988887775421 233444443 34433333334444
Q ss_pred EEEecCCCEEEEEecCceeecc-------cccCCccccccCCceEEeeehH
Q psy4650 199 VSMDVNGCKIIWARHSEVQQAN-------LKTMPEVFENITAGVVLTLSVH 242 (381)
Q Consensus 199 ~~~d~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~dg~~l~~~~~ 242 (381)
...|+.+|+.+-.+........ .......+++.|++..+.+.+.
T Consensus 173 ~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 173 ARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 4489998887655443322111 1122233677787766666554
No 242
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=97.97 E-value=1.4e-05 Score=73.00 Aligned_cols=75 Identities=28% Similarity=0.526 Sum_probs=69.4
Q ss_pred HHhhhhhhhhHhhhccccceeeEeeccccCcceEEeecHHHHHHHHHHHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 306 GLLTSFVQPCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 306 ~l~~~~~~~~~~~Ls~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+...++.+|+.|+....+.+.++.+.++.++...++|++|++++++++++++++++++|+++++.+++|+.|+
T Consensus 282 ~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Vv 356 (404)
T 3i33_A 282 RRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIV 356 (404)
T ss_dssp HHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEE
Confidence 345667899999999999999999998888899999999999999999999999999999999999999999886
No 243
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.96 E-value=0.00045 Score=61.97 Aligned_cols=149 Identities=12% Similarity=0.131 Sum_probs=91.7
Q ss_pred EEEEEecCCeEEEecCCCccceeeEeeccc---------cccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEe
Q psy4650 48 YKISYQESSRVKAFNPIQVATLILKTLYGH---------EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 118 (381)
Q Consensus 48 ~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h---------~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~ 118 (381)
.++.++.++.+..||..+. ..+...... ...+.+.... ++. .+..++.++.|..+|..+|+.+...
T Consensus 55 ~v~~~~~~g~v~a~d~~tG--~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~v~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 55 VVYAADRAGLVKALNADDG--KEIWSVSLAEKDGWFSKEPALLSGGVTV-SGG--HVYIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp EEEEECTTSEEEEEETTTC--CEEEEEECCC---CCSCCCCCEEEEEEE-ETT--EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEEcCCCeEEEEEccCC--ceeeeecCccccccccccCcccccCceE-eCC--EEEEEcCCCEEEEEECCCCCEEEEE
Confidence 5666777889999998643 233332221 2233332222 223 5778888999999999999988776
Q ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcce-----EEEEEcCCCCEEEEEeCCCeEEEEec
Q psy4650 119 EGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERV-----WTISSLKGSNNVAIGYDEGSVLLKVG 193 (381)
Q Consensus 119 ~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v-----~~v~~~~~~~~l~~~~~dg~v~i~~~ 193 (381)
............. +..++.++.++.+..+|..+|+.++......... ...... +..+..++.+|.+..
T Consensus 130 ~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~--- 202 (376)
T 3q7m_A 130 KVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSA--- 202 (376)
T ss_dssp ECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEE---
T ss_pred eCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEE---
Confidence 5443221112222 4477778889999999999999888776432211 111111 234555555555555
Q ss_pred CCCceEEEecCCCEEEEEecCc
Q psy4650 194 REEPAVSMDVNGCKIIWARHSE 215 (381)
Q Consensus 194 ~~~~~~~~d~~~~~~~~~~~~~ 215 (381)
+|..+|..+|.....
T Consensus 203 -------~d~~tG~~~w~~~~~ 217 (376)
T 3q7m_A 203 -------VLMEQGQMIWQQRIS 217 (376)
T ss_dssp -------EETTTCCEEEEEECC
T ss_pred -------EECCCCcEEEEEecc
Confidence 999999999987543
No 244
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.96 E-value=0.00014 Score=66.26 Aligned_cols=128 Identities=10% Similarity=-0.021 Sum_probs=88.4
Q ss_pred CeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEe----------CCCCEEEEeCCCCeeeEEEecC-------C
Q psy4650 102 RLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGS----------EDGSVRVWHSGTHRLEISLTYG-------L 164 (381)
Q Consensus 102 ~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~~-------~ 164 (381)
+.|.+.|..+++.+..+..-..+ .+.++|+++.++.+. .++.|.++|..+++.+..+... .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 79999999999999988765555 899999999776654 4678999999999988877532 1
Q ss_pred cceEEEEEcCCCCEEEEEeC--CCeEEEEecCCCceEEEecCCCEEEEEecCceeecc-cccCCccccccCCceEEeeeh
Q psy4650 165 ERVWTISSLKGSNNVAIGYD--EGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQAN-LKTMPEVFENITAGVVLTLSV 241 (381)
Q Consensus 165 ~~v~~v~~~~~~~~l~~~~~--dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~ 241 (381)
.....+.++|+|+++.++.. ++.+.+ +|..+++.+..+........ -.+....+.+++||..+++..
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsV----------ID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGV----------VDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDF 246 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEE----------EETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEEC
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEE----------EECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEEC
Confidence 23456899999999888764 567777 78877776655443211000 001111234556776665554
No 245
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.90 E-value=0.00051 Score=67.03 Aligned_cols=131 Identities=11% Similarity=0.004 Sum_probs=88.2
Q ss_pred EEEeeeCCCccEEEEEcCCC-------------------eEEEEECCCCeEEEEecc--CC-------CCEEEEEEecCC
Q psy4650 83 CVDYYHGGDKPYLISGADDR-------------------LVKIWDYQNKTCVQTLEG--HG-------QNISAVCFHPEL 134 (381)
Q Consensus 83 ~~~~~~~~~~~~l~s~~~d~-------------------~v~vwd~~~~~~~~~~~~--~~-------~~v~~~~~~p~~ 134 (381)
.+.+.|... .++.+..++ .|..||..+|+.+..++. |. .+........+|
T Consensus 239 ~~~~d~~~~--~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G 316 (689)
T 1yiq_A 239 SFAYDPELN--LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDG 316 (689)
T ss_dssp CEEEETTTT--EEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred ceeEcCCCC--EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCC
Confidence 567777555 677777765 499999999999887764 21 222223333456
Q ss_pred C---EEEEEeCCCCEEEEeCCCCeeeEEEecCCc-c--------------------------------------eEEEEE
Q psy4650 135 P---IVITGSEDGSVRVWHSGTHRLEISLTYGLE-R--------------------------------------VWTISS 172 (381)
Q Consensus 135 ~---~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-~--------------------------------------v~~v~~ 172 (381)
. .++.++.+|.+.++|..+|+.+........ . -..+++
T Consensus 317 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~ 396 (689)
T 1yiq_A 317 KPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSY 396 (689)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEE
T ss_pred cEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceE
Confidence 4 688889999999999999998854432110 0 012678
Q ss_pred cCCCCEEEEEeCCCeEEEEecC-----------------------------------CCceEEEecCCCEEEEEecCc
Q psy4650 173 LKGSNNVAIGYDEGSVLLKVGR-----------------------------------EEPAVSMDVNGCKIIWARHSE 215 (381)
Q Consensus 173 ~~~~~~l~~~~~dg~v~i~~~~-----------------------------------~~~~~~~d~~~~~~~~~~~~~ 215 (381)
+|+...+.+...+....++... +..+..||..+|+.+|.....
T Consensus 397 dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~ 474 (689)
T 1yiq_A 397 NPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV 474 (689)
T ss_dssp ETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES
T ss_pred CCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC
Confidence 8888888777665444444221 145778999999999997654
No 246
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.88 E-value=0.0009 Score=59.31 Aligned_cols=202 Identities=9% Similarity=-0.063 Sum_probs=115.6
Q ss_pred hcceeeeecCCCceEEEEEe--cCCeEEEecCCCccceeeEe-------eccccccEEEEEeeeCCCccEEEEEcC----
Q psy4650 34 ETKVDITTNKDMIEYKISYQ--ESSRVKAFNPIQVATLILKT-------LYGHEKGVNCVDYYHGGDKPYLISGAD---- 100 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~--~d~~v~i~~~~~~~~~~~~~-------l~~h~~~v~~~~~~~~~~~~~l~s~~~---- 100 (381)
..|..+...+++ .++++.. .++.+++|.+.. .. +.. ..+|...+.++++++++. ++++-..
T Consensus 17 ~~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~~--g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~--L~v~D~g~~~~ 90 (343)
T 2qe8_A 17 LAPGNITLTPDG-RLFLSLHQFYQPEMQVAELTQ--DG-LIPFPPQSGNAIITFDTVLGIKSDGNGI--VWMLDNGNQSK 90 (343)
T ss_dssp SCEEEEEECTTS-CEEEEECGGGCCSCSEEEEET--TE-EEESCCCCSSCCCCCSCEEEEEECSSSE--EEEEECHHHHT
T ss_pred CCcceEEECCCC-CEEEEeCCCCCCceEEEEECC--CC-eecCCCcccCcccceeEeeEEEEcCCCc--EEEEcCCCCcC
Confidence 457778877764 4566643 233244454421 11 221 224567899999998764 4444333
Q ss_pred -CCeEEEEECCCCeEEEEeccC------CCCEEEEEEecCCCEE-EEEe---CCCCEEEEeCCCCeeeEEEecCC-----
Q psy4650 101 -DRLVKIWDYQNKTCVQTLEGH------GQNISAVCFHPELPIV-ITGS---EDGSVRVWHSGTHRLEISLTYGL----- 164 (381)
Q Consensus 101 -d~~v~vwd~~~~~~~~~~~~~------~~~v~~~~~~p~~~~l-~s~~---~d~~i~vwd~~~~~~~~~~~~~~----- 164 (381)
++.|.+||..+++.+..+..+ ...+..++++|++..+ ++-. .++.|.+||+.+++....+.+|.
T Consensus 91 ~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~ 170 (343)
T 2qe8_A 91 SVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPE 170 (343)
T ss_dssp SCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCC
T ss_pred CCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccc
Confidence 678999999999876665432 2346889999865544 4444 57899999998887655543311
Q ss_pred ------------------------cceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecC---CCEEEEE--ecCc
Q psy4650 165 ------------------------ERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVN---GCKIIWA--RHSE 215 (381)
Q Consensus 165 ------------------------~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~---~~~~~~~--~~~~ 215 (381)
..+..++++|+|+.|..+..++. ++|. ++.. .+.. .. ....
T Consensus 171 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l~~--------~~~~~~~~~~~-~~~~~~~~ 240 (343)
T 2qe8_A 171 DIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SMYR--------IKSADLSNLQL-TDAELGSK 240 (343)
T ss_dssp SCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EEEE--------EEHHHHTCTTC-CHHHHHTT
T ss_pred ccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eEEE--------EEHHHhcCCCC-Chhhhhcc
Confidence 13567888888877776665543 2211 2210 0000 00 0000
Q ss_pred eeecccccCCccccccCCceEEeeehHHHHHhccCC
Q psy4650 216 VQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDI 251 (381)
Q Consensus 216 ~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~ 251 (381)
.....-.+....+++.++|.+.+.......+..|+.
T Consensus 241 ~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 241 IERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp CEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred eEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 000000112333667788888888777777888887
No 247
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.88 E-value=7.7e-05 Score=73.04 Aligned_cols=112 Identities=16% Similarity=0.176 Sum_probs=76.4
Q ss_pred cccccEEEEEeeeCCCccEEE-----EEcCCCeEEEEECCCCeEEEE-eccCCCCEEEEEEecCCCEEEEEeCCCC----
Q psy4650 76 GHEKGVNCVDYYHGGDKPYLI-----SGADDRLVKIWDYQNKTCVQT-LEGHGQNISAVCFHPELPIVITGSEDGS---- 145 (381)
Q Consensus 76 ~h~~~v~~~~~~~~~~~~~l~-----s~~~d~~v~vwd~~~~~~~~~-~~~~~~~v~~~~~~p~~~~l~s~~~d~~---- 145 (381)
+|...+.++.|||+|. +++ .|+...+|++||+.+++.+.. +.+. ....++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~--~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGR--ILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TSCCEEEEEEECTTSS--EEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCcEEEEEEEECCCCC--EEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEecCccccc
Confidence 4666788999999988 555 233346899999999985443 2211 12578899 9999988887744
Q ss_pred ---------EEEEeCCCCee--eEEE--ec-CCcceEEEEEcCCCCEEEEEeC----CCeEEEEe
Q psy4650 146 ---------VRVWHSGTHRL--EISL--TY-GLERVWTISSLKGSNNVAIGYD----EGSVLLKV 192 (381)
Q Consensus 146 ---------i~vwd~~~~~~--~~~~--~~-~~~~v~~v~~~~~~~~l~~~~~----dg~v~i~~ 192 (381)
|++|++.++.. ...+ .. +.....++.|+|+|++++.... +..+.+++
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 265 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKD 265 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEE
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEE
Confidence 99999987653 2222 22 2335778999999998765543 23666655
No 248
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=97.87 E-value=1.7e-05 Score=74.39 Aligned_cols=75 Identities=20% Similarity=0.319 Sum_probs=65.8
Q ss_pred HHhhhhhhhhHhhhccccceeeEeecccc----CcceEEeecHHHHHHHHHHHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 306 GLLTSFVQPCMHVLSTLQSSNVFVESLYD----GLDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 306 ~l~~~~~~~~~~~Ls~~~~~~~~~~~~~~----~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+...++.+|+.|+....+.++++.+.+ ..++...++|++|++++++++.++..+++++|+++++++++|+.|+
T Consensus 229 ~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~Vv 307 (509)
T 2v7y_A 229 QRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVI 307 (509)
T ss_dssp HHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEE
Confidence 34567788999999998888888887654 2456779999999999999999999999999999999999999986
No 249
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=97.86 E-value=4.9e-06 Score=79.73 Aligned_cols=75 Identities=20% Similarity=0.309 Sum_probs=66.6
Q ss_pred HHhhhhhhhhHhhhccccceeeEeeccccC----cceEEeecHHHHHHHHHHHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 306 GLLTSFVQPCMHVLSTLQSSNVFVESLYDG----LDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 306 ~l~~~~~~~~~~~Ls~~~~~~~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+...++.+|+.|+....+.++++.+.+. .++...++|.+|+++++++|.+++.+|+++|++|++++.+|+.|+
T Consensus 260 ~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~Vv 338 (605)
T 2kho_A 260 QRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVI 338 (605)
T ss_dssp HHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHHHHHHHTTTCCTTTCSEEE
T ss_pred HHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEE
Confidence 446677899999999988888888877642 567789999999999999999999999999999999999999986
No 250
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=97.86 E-value=3.3e-05 Score=70.19 Aligned_cols=75 Identities=25% Similarity=0.456 Sum_probs=68.9
Q ss_pred HHhhhhhhhhHhhhccccceeeEeeccccCcceEEeecHHHHHHHHHHHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 306 GLLTSFVQPCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 306 ~l~~~~~~~~~~~Ls~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+...++.+|+.|+....+.+.++.+.++.++...++|.+|+++++++++++.++++++|+++++++.+|+.|+
T Consensus 274 ~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Vv 348 (394)
T 3qfu_A 274 AKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIV 348 (394)
T ss_dssp HHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 344567889999999999999999998888889999999999999999999999999999999999999999886
No 251
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.84 E-value=0.0091 Score=50.53 Aligned_cols=152 Identities=5% Similarity=-0.127 Sum_probs=94.1
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 114 (381)
.+..+..+++...+.++....+.|..+++.... ....+........+++++|++.. ++++....+.|.+++......
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~--~~~~~~~~~~~p~~ia~d~~~~~-lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE--PTTIIRQDLGSPEGIALDHLGRT-IFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCC--CEEEECTTCCCEEEEEEETTTTE-EEEEETTTTEEEEEETTSCSC
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCC--cEEEEECCCCCccEEEEEecCCe-EEEEECCCCEEEEEEcCCCCE
Confidence 456777777666666777778899999986422 11222222356789999886552 556667788999999875432
Q ss_pred EEEeccCCCCEEEEEEecCCCEEEEEeC---CCCEEEEeCCCCeeeEEE-ecCCcceEEEEEcCCCCEEEEE-eCCCeEE
Q psy4650 115 VQTLEGHGQNISAVCFHPELPIVITGSE---DGSVRVWHSGTHRLEISL-TYGLERVWTISSLKGSNNVAIG-YDEGSVL 189 (381)
Q Consensus 115 ~~~~~~~~~~v~~~~~~p~~~~l~s~~~---d~~i~vwd~~~~~~~~~~-~~~~~~v~~v~~~~~~~~l~~~-~~dg~v~ 189 (381)
.............++++|++..+..+.. .+.|..++..... ...+ ...-.....++++|++..|..+ ...+.|.
T Consensus 114 ~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~ 192 (267)
T 1npe_A 114 RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAE 192 (267)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEE
Confidence 2222222245689999997665544443 3678888876433 2222 2233457888999876655443 3445565
Q ss_pred E
Q psy4650 190 L 190 (381)
Q Consensus 190 i 190 (381)
.
T Consensus 193 ~ 193 (267)
T 1npe_A 193 C 193 (267)
T ss_dssp E
T ss_pred E
Confidence 5
No 252
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.76 E-value=0.0006 Score=57.74 Aligned_cols=164 Identities=10% Similarity=-0.023 Sum_probs=95.5
Q ss_pred eeEeeccccc--cEEEEEeeeCCCccEEEEEcC--CCeEEEEECCCCeEEEEeccCC-CCEEEEEEecCCCEEEEEe-CC
Q psy4650 70 ILKTLYGHEK--GVNCVDYYHGGDKPYLISGAD--DRLVKIWDYQNKTCVQTLEGHG-QNISAVCFHPELPIVITGS-ED 143 (381)
Q Consensus 70 ~~~~l~~h~~--~v~~~~~~~~~~~~~l~s~~~--d~~v~vwd~~~~~~~~~~~~~~-~~v~~~~~~p~~~~l~s~~-~d 143 (381)
++.++ .|.. ....+.|++++. ++++.+. ++.|++.|..+++.+..+.-.. .....+++ ++..+..+. .+
T Consensus 11 vv~~~-p~~~~~f~~Gl~~~~dg~--Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~t~~~ 85 (266)
T 2iwa_A 11 VLNEF-PHDPYAFTQGLVYAENDT--LFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL--LNEKLYQVVWLK 85 (266)
T ss_dssp EEEEE-ECCTTCCEEEEEECSTTE--EEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEETTC
T ss_pred EEEEE-ECCCCCCcccEEEeCCCe--EEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE--eCCEEEEEEecC
Confidence 44444 3443 468999998743 5555443 6899999999999888765322 12234444 455555554 48
Q ss_pred CCEEEEeCCCCeeeEEEecC-CcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccc
Q psy4650 144 GSVRVWHSGTHRLEISLTYG-LERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLK 222 (381)
Q Consensus 144 ~~i~vwd~~~~~~~~~~~~~-~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 222 (381)
+.+.++|..+++.+.++... ... ...+++|..+..+..++.+.+ +|+.+.+.+-.+.-......+.
T Consensus 86 ~~v~viD~~t~~v~~~i~~g~~~g---~glt~Dg~~l~vs~gs~~l~v----------iD~~t~~v~~~I~Vg~~~~p~~ 152 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQMKDG---WGLATDGKILYGSDGTSILYE----------IDPHTFKLIKKHNVKYNGHRVI 152 (266)
T ss_dssp SEEEEEETTTTEEEEEEECCSSSC---CEEEECSSSEEEECSSSEEEE----------ECTTTCCEEEEEECEETTEECC
T ss_pred CEEEEEECCCCcEEEEEECCCCCe---EEEEECCCEEEEECCCCeEEE----------EECCCCcEEEEEEECCCCcccc
Confidence 89999999999999888644 222 224456666666666777777 8887766554443221100000
Q ss_pred cCCccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 223 TMPEVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 223 ~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
....+++. +|...+.......+...|+..
T Consensus 153 -~~nele~~-dg~lyvn~~~~~~V~vID~~t 181 (266)
T 2iwa_A 153 -RLNELEYI-NGEVWANIWQTDCIARISAKD 181 (266)
T ss_dssp -CEEEEEEE-TTEEEEEETTSSEEEEEETTT
T ss_pred -cceeEEEE-CCEEEEecCCCCeEEEEECCC
Confidence 01112334 565444444445555666644
No 253
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.75 E-value=0.00088 Score=62.90 Aligned_cols=88 Identities=10% Similarity=-0.058 Sum_probs=59.4
Q ss_pred eEEEEECCC--CeE-EEEeccCCCCEEEEEEecCCCEEEEEe-CCCCEEEEeCCCCe------------eeEEEecCCcc
Q psy4650 103 LVKIWDYQN--KTC-VQTLEGHGQNISAVCFHPELPIVITGS-EDGSVRVWHSGTHR------------LEISLTYGLER 166 (381)
Q Consensus 103 ~v~vwd~~~--~~~-~~~~~~~~~~v~~~~~~p~~~~l~s~~-~d~~i~vwd~~~~~------------~~~~~~~~~~~ 166 (381)
.|.|.|..+ +.. +..+... ...+++.++|||++++.++ .+.+|.++|+.+.+ ...... -...
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~g 332 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLG 332 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSC
T ss_pred cEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCC
Confidence 366777766 443 4455432 2348899999999766554 58899999998653 222232 2356
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy4650 167 VWTISSLKGSNNVAIGYDEGSVLLKV 192 (381)
Q Consensus 167 v~~v~~~~~~~~l~~~~~dg~v~i~~ 192 (381)
...++|+|+|....+...|+.+..|+
T Consensus 333 P~h~aF~~dG~aY~t~~ldsqV~kwd 358 (595)
T 1fwx_A 333 PLHTAFDGRGNAYTSLFLDSQVVKWN 358 (595)
T ss_dssp EEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred cceEEECCCCeEEEEEecCCcEEEEE
Confidence 78999999995455666788888854
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.74 E-value=0.00066 Score=57.00 Aligned_cols=165 Identities=13% Similarity=0.134 Sum_probs=99.4
Q ss_pred eeeEeecccc--ccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEE-eCCCC
Q psy4650 69 LILKTLYGHE--KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITG-SEDGS 145 (381)
Q Consensus 69 ~~~~~l~~h~--~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~-~~d~~ 145 (381)
.++.++ .|. .....+.|+. . .++.+.+.+|.|+++|+.+++.+..+ -. .........+.+..+... -.++.
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~~--~-~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~~Ly~ltw~~~~ 117 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFHQ--G-HFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGERLYQLTWTEGL 117 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET--T-EEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSSCEEEEESSSCE
T ss_pred EEEEEE-cCCCccccceEEEEC--C-EEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCCEEEEEEccCCE
Confidence 445555 344 3457788862 3 37788899999999999999877776 22 233443334455544444 45889
Q ss_pred EEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccCC
Q psy4650 146 VRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMP 225 (381)
Q Consensus 146 i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 225 (381)
+.+||..+.+.+.++..... -+.++ +++..|..+..++.+.+ +|+.+.+.+-.+.-......+....
T Consensus 118 v~V~D~~Tl~~~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~----------iDp~T~~v~~~I~V~~~g~~v~~lN 184 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTF----------HEPDGFALVGAVQVKLRGQPVELIN 184 (268)
T ss_dssp EEEEETTTTEEEEEEECSSC-CCCEE--EETTEEEEECSSSEEEE----------ECTTTCCEEEEEECEETTEECCCEE
T ss_pred EEEEECCcCcEEEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEE----------EcCCCCeEEEEEEeCCCCccccccc
Confidence 99999999999999876432 23344 45666666666777776 8887777665443322111111111
Q ss_pred ccccccCCceEEeeehHHHHHhccCCCcC
Q psy4650 226 EVFENITAGVVLTLSVHVTIKYRLDISDS 254 (381)
Q Consensus 226 ~~~~~~~dg~~l~~~~~d~~~~~~d~~~~ 254 (381)
. +++. +|+..+.......+...|+...
T Consensus 185 e-Le~~-dG~lyanvw~s~~I~vIDp~TG 211 (268)
T 3nok_A 185 E-LECA-NGVIYANIWHSSDVLEIDPATG 211 (268)
T ss_dssp E-EEEE-TTEEEEEETTCSEEEEECTTTC
T ss_pred c-cEEe-CCEEEEEECCCCeEEEEeCCCC
Confidence 1 2333 6665555545556666676543
No 255
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.74 E-value=0.00059 Score=57.25 Aligned_cols=164 Identities=13% Similarity=0.143 Sum_probs=96.4
Q ss_pred eeEeeccccc--cEEEEEeeeCCCccEEEEEcCCC--eEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeC-CC
Q psy4650 70 ILKTLYGHEK--GVNCVDYYHGGDKPYLISGADDR--LVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSE-DG 144 (381)
Q Consensus 70 ~~~~l~~h~~--~v~~~~~~~~~~~~~l~s~~~d~--~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~-d~ 144 (381)
++.++ .|.. ....+.|+ ++ .++.+.+.+| .|+++|+.+++.+..+.-.. ........+.+..+....+ ++
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~--~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~ 107 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NG--YFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNG 107 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TT--EEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSS
T ss_pred EEEEe-cCCCCcccceEEEE-CC--EEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCC
Confidence 44555 4443 35788887 44 3667777766 89999999999888776433 3344444445665555544 88
Q ss_pred CEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeecccccC
Q psy4650 145 SVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTM 224 (381)
Q Consensus 145 ~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 224 (381)
.+.+||..+.+.+.++...... +.++ +++..|..+..++.+.+ +|+.+.+.+-.+.-......+...
T Consensus 108 ~v~v~D~~t~~~~~ti~~~~eG-~glt--~dg~~L~~SdGs~~i~~----------iDp~T~~v~~~I~V~~~g~~~~~l 174 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYDGEG-WGLT--HNDQYLIMSDGTPVLRF----------LDPESLTPVRTITVTAHGEELPEL 174 (262)
T ss_dssp EEEEEETTTCCEEEEEECSSCC-CCEE--ECSSCEEECCSSSEEEE----------ECTTTCSEEEEEECEETTEECCCE
T ss_pred EEEEEECccCcEEEEEECCCCc-eEEe--cCCCEEEEECCCCeEEE----------EcCCCCeEEEEEEeccCCcccccc
Confidence 9999999999999988764322 2333 45555555555566666 788776655443321100011110
Q ss_pred CccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 225 PEVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 225 ~~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
. .+++. +|+..+.......+..+|+..
T Consensus 175 N-ELe~~-~G~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 175 N-ELEWV-DGEIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp E-EEEEE-TTEEEEEETTSSEEEEECTTT
T ss_pred c-eeEEE-CCEEEEEEccCCeEEEEECCC
Confidence 0 02333 566555554555566666543
No 256
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.71 E-value=0.00054 Score=60.00 Aligned_cols=144 Identities=10% Similarity=-0.017 Sum_probs=96.4
Q ss_pred EEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEE
Q psy4650 48 YKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISA 127 (381)
Q Consensus 48 ~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~ 127 (381)
.+..+..++.+..+++. .........+...+.++...+++. +..++.++.+..+|.. +..+..+......+.+
T Consensus 109 ~l~v~t~~~~l~~~d~~---g~~~~~~~~~~~~~~~~~~~~~g~---l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~ 181 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD---GTEKWRFKTKKAIYATPIVSEDGT---IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSA 181 (330)
T ss_dssp EEEEECTTSEEEEECTT---SCEEEEEECSSCCCSCCEECTTSC---EEEECTTSEEEEECTT-SCEEEEEECSSCCCSC
T ss_pred EEEEEecCCEEEEEcCC---CCEEEEEcCCCceeeeeEEcCCCE---EEEEcCCCEEEEECCC-CCEeEEEecCCCceee
Confidence 45566778889999985 223334444444555666655544 6677888999999998 7777666655556677
Q ss_pred EEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCE
Q psy4650 128 VCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCK 207 (381)
Q Consensus 128 ~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~ 207 (381)
+...+++..++.+ +.+..+| .+++...........+.++...++|.+ ..++.++.+.. +|. ++.
T Consensus 182 ~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~----------~~~-~g~ 245 (330)
T 3hxj_A 182 ASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI-YVTSLDGHLYA----------INP-DGT 245 (330)
T ss_dssp CEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCE-EEEETTTEEEE----------ECT-TSC
T ss_pred eEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeE-EEEcCCCeEEE----------ECC-CCC
Confidence 7777777755544 7899999 777777777665566777888877754 44555666655 664 455
Q ss_pred EEEEecC
Q psy4650 208 IIWARHS 214 (381)
Q Consensus 208 ~~~~~~~ 214 (381)
.+|....
T Consensus 246 ~~~~~~~ 252 (330)
T 3hxj_A 246 EKWRFKT 252 (330)
T ss_dssp EEEEEEC
T ss_pred EeEEeeC
Confidence 5676543
No 257
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.61 E-value=0.0037 Score=61.12 Aligned_cols=150 Identities=17% Similarity=0.108 Sum_probs=92.9
Q ss_pred eeeeecCCCceEEEEEecC---CeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcC---CCeEEEEECC
Q psy4650 37 VDITTNKDMIEYKISYQES---SRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGAD---DRLVKIWDYQ 110 (381)
Q Consensus 37 ~~i~~~~~~~~~~~s~~~d---~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~---d~~v~vwd~~ 110 (381)
..+...+++..++++.+.+ +.++++++.... .....+..+.+..... |++++.. +++.... .+.|..+++.
T Consensus 237 ~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~-~~~~~l~~~~~~~~~~-~~~~g~~-l~~~t~~~~~~~~l~~~d~~ 313 (693)
T 3iuj_A 237 VGATVTEDDRFLLISAANSTSGNRLYVKDLSQEN-APLLTVQGDLDADVSL-VDNKGST-LYLLTNRDAPNRRLVTVDAA 313 (693)
T ss_dssp EEEEECTTSCEEEEEEESSSSCCEEEEEETTSTT-CCCEEEECSSSSCEEE-EEEETTE-EEEEECTTCTTCEEEEEETT
T ss_pred EEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCC-CceEEEeCCCCceEEE-EeccCCE-EEEEECCCCCCCEEEEEeCC
Confidence 3455677765555555433 478888875432 2345566666666665 6777764 4444443 3689999998
Q ss_pred CCeE--EEEeccCCCCEEEEEEecCCCEEEEEeC-CC--CEEEEeCCCCeeeEEEec-CCcceEEEEEcCCCCEEEEEeC
Q psy4650 111 NKTC--VQTLEGHGQNISAVCFHPELPIVITGSE-DG--SVRVWHSGTHRLEISLTY-GLERVWTISSLKGSNNVAIGYD 184 (381)
Q Consensus 111 ~~~~--~~~~~~~~~~v~~~~~~p~~~~l~s~~~-d~--~i~vwd~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~~~~~ 184 (381)
++.. ...+..|...+. .|+|++..|+.... ++ .|.+||+.++. ...+.. ....+..+.+++++..++....
T Consensus 314 ~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~s 390 (693)
T 3iuj_A 314 NPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFE 390 (693)
T ss_dssp SCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEE
T ss_pred CCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEec
Confidence 7654 234555655555 89999987766654 44 68899988554 344432 3455677778888776655544
Q ss_pred C----CeEEEEe
Q psy4650 185 E----GSVLLKV 192 (381)
Q Consensus 185 d----g~v~i~~ 192 (381)
+ +.+..++
T Consensus 391 s~~tP~~l~~~d 402 (693)
T 3iuj_A 391 NYAQPPTLYRFE 402 (693)
T ss_dssp CSSSCCEEEEEC
T ss_pred CCCCCCEEEEEE
Confidence 3 5565544
No 258
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.58 E-value=0.0025 Score=57.06 Aligned_cols=146 Identities=10% Similarity=-0.017 Sum_probs=92.7
Q ss_pred EEEEEecCCeEEEecCCCccceeeEeecccc--c-----c---EEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEE
Q psy4650 48 YKISYQESSRVKAFNPIQVATLILKTLYGHE--K-----G---VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 117 (381)
Q Consensus 48 ~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~--~-----~---v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~ 117 (381)
.++.+..++.+..+|+... ..+....... + . +.+.... .+. .+..++.++.+..+|..+++.+..
T Consensus 190 ~v~~g~~~g~l~~~d~~tG--~~~w~~~~~~~~~~~~~~~~~~~~~~p~~-~~~--~v~~~~~~g~l~~~d~~tG~~~w~ 264 (376)
T 3q7m_A 190 AAVVGGDNGRVSAVLMEQG--QMIWQQRISQATGSTEIDRLSDVDTTPVV-VNG--VVFALAYNGNLTALDLRSGQIMWK 264 (376)
T ss_dssp EEEECCTTTEEEEEETTTC--CEEEEEECCC-----------CCCCCCEE-ETT--EEEEECTTSCEEEEETTTCCEEEE
T ss_pred EEEEEcCCCEEEEEECCCC--cEEEEEecccCCCCcccccccccCCCcEE-ECC--EEEEEecCcEEEEEECCCCcEEee
Confidence 4566777888999998642 2333322111 0 0 1111111 122 577788899999999999988776
Q ss_pred eccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecC-CcceEEEEEcCCCCEEEEEeCCCeEEEEecCCC
Q psy4650 118 LEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYG-LERVWTISSLKGSNNVAIGYDEGSVLLKVGREE 196 (381)
Q Consensus 118 ~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~ 196 (381)
... .....+.. ++..+..++.++.+..+|..+|+.+...... ......... .+..+..++.+|.+.+
T Consensus 265 ~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~------ 332 (376)
T 3q7m_A 265 REL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHW------ 332 (376)
T ss_dssp ECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEE------
T ss_pred ccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEE------
Confidence 653 22334433 4667777888999999999999988777522 112222222 2456777777887777
Q ss_pred ceEEEecCCCEEEEEecC
Q psy4650 197 PAVSMDVNGCKIIWARHS 214 (381)
Q Consensus 197 ~~~~~d~~~~~~~~~~~~ 214 (381)
+|..+|+.+|....
T Consensus 333 ----~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 333 ----INVEDGRFVAQQKV 346 (376)
T ss_dssp ----EETTTCCEEEEEEC
T ss_pred ----EECCCCcEEEEEec
Confidence 99999999998654
No 259
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=97.57 E-value=0.00014 Score=65.67 Aligned_cols=75 Identities=19% Similarity=0.258 Sum_probs=64.0
Q ss_pred HHhhhhhhhhHhhhccccceeeEeecccc----CcceEEeecHHHHHHHHHHHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 306 GLLTSFVQPCMHVLSTLQSSNVFVESLYD----GLDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 306 ~l~~~~~~~~~~~Ls~~~~~~~~~~~~~~----~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+...++.+|+.|+....+.++++.+.+ ..++...++|++|++++++++.++.++++++|+++++.+.+|+.|+
T Consensus 260 ~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Iv 338 (383)
T 1dkg_D 260 QRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVI 338 (383)
T ss_dssp HHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEE
T ss_pred HHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEE
Confidence 34566788899999988878888876653 2455679999999999999999999999999999999999999886
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.54 E-value=0.0047 Score=51.30 Aligned_cols=165 Identities=13% Similarity=0.096 Sum_probs=95.5
Q ss_pred eeeEeecccc--ccEEEEEeeeCCCccEEEEEcCC--CeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEE-eCC
Q psy4650 69 LILKTLYGHE--KGVNCVDYYHGGDKPYLISGADD--RLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITG-SED 143 (381)
Q Consensus 69 ~~~~~l~~h~--~~v~~~~~~~~~~~~~l~s~~~d--~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~-~~d 143 (381)
.++.++ .|. .....+.|+. . .++.+.+.+ ..|+.+|+.+++.+..+.-.. ........+.+..+... -.+
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~--~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~ 84 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR--G-HLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRN 84 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET--T-EEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSS
T ss_pred EEEEEc-CCCCccccccEEEEC--C-EEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeC
Confidence 345555 454 4567888875 3 266676665 499999999999888776433 22333334445544444 448
Q ss_pred CCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCceeeccccc
Q psy4650 144 GSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKT 223 (381)
Q Consensus 144 ~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 223 (381)
+.+.+||..+.+.+.++...... +.++ +++..|..+..++.+.+ +|+.+...+-.+.-......+..
T Consensus 85 ~~v~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~----------iDp~t~~~~~~I~V~~~g~~~~~ 151 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRK----------LDPDTLQQVGSIKVTAGGRPLDN 151 (243)
T ss_dssp SEEEEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEE----------ECTTTCCEEEEEECEETTEECCC
T ss_pred CEEEEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEE----------EeCCCCeEEEEEEEccCCccccc
Confidence 89999999999999988764322 3343 34555555555666666 88877766544432211111111
Q ss_pred CCccccccCCceEEeeehHHHHHhccCCCc
Q psy4650 224 MPEVFENITAGVVLTLSVHVTIKYRLDISD 253 (381)
Q Consensus 224 ~~~~~~~~~dg~~l~~~~~d~~~~~~d~~~ 253 (381)
... +++. +|+..+-......+...|+..
T Consensus 152 lNe-Le~~-~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 152 LNE-LEWV-NGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp EEE-EEEE-TTEEEEEETTTTEEEEECTTT
T ss_pred cee-eEEe-CCEEEEEECCCCeEEEEECCC
Confidence 100 2222 566555544445556666543
No 261
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.48 E-value=0.036 Score=46.74 Aligned_cols=164 Identities=6% Similarity=-0.072 Sum_probs=93.1
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcC--CCeEEEEECCC
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGAD--DRLVKIWDYQN 111 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~--d~~v~vwd~~~ 111 (381)
..|..+...+++..+.++....+.|.++++.......+ ..........++++|++.. ++++... .+.|..++...
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~--~~~~~~~P~~i~vd~~~g~-lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL--FDTGLVNPRGIVTDPVRGN-LYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSSCSSEEEEEEETTTTE-EEEEECCSSSCEEEEEETTS
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE--EECCCCCccEEEEeeCCCE-EEEEECCCCCcEEEEEecCC
Confidence 35667777765566666667778899988853222111 2222245688999986552 3344333 46888888764
Q ss_pred CeEEEEeccCCCCEEEEEEecCCCEEEEE-eCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 112 KTCVQTLEGHGQNISAVCFHPELPIVITG-SEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 112 ~~~~~~~~~~~~~v~~~~~~p~~~~l~s~-~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
................++++|++..|..+ ...+.|.++|..+......+.. ......++.. ++.+.+
T Consensus 156 ~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-----------~~~lyv 223 (267)
T 1npe_A 156 TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-----------GKNLYY 223 (267)
T ss_dssp CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-----------TTEEEE
T ss_pred CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-----------CCEEEE
Confidence 33222222223456899999987765544 4567899999976543333322 1223344433 223333
Q ss_pred EecCCCceEEEecCCCEEEEEe
Q psy4650 191 KVGREEPAVSMDVNGCKIIWAR 212 (381)
Q Consensus 191 ~~~~~~~~~~~d~~~~~~~~~~ 212 (381)
.+.....+..+|..+++.+-.+
T Consensus 224 a~~~~~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 224 TDWKTNSVIAMDLAISKEMDTF 245 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEE
T ss_pred EECCCCeEEEEeCCCCCceEEE
Confidence 3333334444888888766444
No 262
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.48 E-value=0.0023 Score=62.26 Aligned_cols=151 Identities=11% Similarity=0.060 Sum_probs=96.8
Q ss_pred EEEEEecCCeEEEecCCCccceeeEeeccc-c----ccEEEEEeeeCCCccEEEEEcC------CCeEEEEECCCCeEEE
Q psy4650 48 YKISYQESSRVKAFNPIQVATLILKTLYGH-E----KGVNCVDYYHGGDKPYLISGAD------DRLVKIWDYQNKTCVQ 116 (381)
Q Consensus 48 ~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h-~----~~v~~~~~~~~~~~~~l~s~~~------d~~v~vwd~~~~~~~~ 116 (381)
.++.++.++.+..+|..+ ...+.....+ . ..+.+.....+ . .++.++. ++.|..+|..+|+.+.
T Consensus 130 ~v~v~~~dg~l~alD~~t--G~~~W~~~~~~~~~~~~~~~~~p~v~~-~--~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 130 KVYVGAWDGRLIALDAAT--GKEVWHQNTFEGQKGSLTITGAPRVFK-G--KVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp EEEEECTTSEEEEEETTT--CCEEEEEETTTTCCSSCBCCSCCEEET-T--EEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EEEEEcCCCEEEEEECCC--CCEEeeecCCcCcCcCcccccCcEEEC-C--EEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 566778889999999864 3344444433 1 12222111112 2 3444432 7999999999999887
Q ss_pred EeccCCCC--------------------------------EEEEEEecCCCEEEEEeCCC-------------------C
Q psy4650 117 TLEGHGQN--------------------------------ISAVCFHPELPIVITGSEDG-------------------S 145 (381)
Q Consensus 117 ~~~~~~~~--------------------------------v~~~~~~p~~~~l~s~~~d~-------------------~ 145 (381)
.+...... ...++++|++..+..+..++ .
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 77532111 13578889888887776553 4
Q ss_pred EEEEeCCCCeeeEEEecCCc---------ceEEEEEcCCC---CEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEec
Q psy4650 146 VRVWHSGTHRLEISLTYGLE---------RVWTISSLKGS---NNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARH 213 (381)
Q Consensus 146 i~vwd~~~~~~~~~~~~~~~---------~v~~v~~~~~~---~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~ 213 (381)
|..+|..+|+.++.+..... ...-+....+| ..++.++.+|.+.+ +|..+|+++|...
T Consensus 285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~----------lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFV----------LDRTNGKFISAKN 354 (677)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEE----------EETTTCCEEEEEE
T ss_pred EEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEE----------EECCCCCEecccc
Confidence 99999999999988764221 12222233355 56777777777777 8999999998865
No 263
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.29 E-value=0.0078 Score=58.47 Aligned_cols=146 Identities=12% Similarity=0.182 Sum_probs=91.9
Q ss_pred eEEEecCCCccceeeEeec--ccc-------ccEEEEEeeeCCC-ccEEEEEcCCCeEEEEECCCCeEEEEeccCC----
Q psy4650 57 RVKAFNPIQVATLILKTLY--GHE-------KGVNCVDYYHGGD-KPYLISGADDRLVKIWDYQNKTCVQTLEGHG---- 122 (381)
Q Consensus 57 ~v~i~~~~~~~~~~~~~l~--~h~-------~~v~~~~~~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~---- 122 (381)
.|..+|+.+. ..+..++ .|. .+.....+..++. ...++.++.+|.+.++|..+|+.+...+...
T Consensus 271 ~v~AlD~~tG--~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~ 348 (668)
T 1kv9_A 271 SILAIRPDTG--KLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWA 348 (668)
T ss_dssp EEEEECTTTC--CEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSE
T ss_pred eEEEEcCCCC--ceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccc
Confidence 3888887643 3333333 232 2222233333443 1268899999999999999998774432211
Q ss_pred --------CCE------------------------EEEEEecCCCEEEEE------------------------------
Q psy4650 123 --------QNI------------------------SAVCFHPELPIVITG------------------------------ 140 (381)
Q Consensus 123 --------~~v------------------------~~~~~~p~~~~l~s~------------------------------ 140 (381)
.++ ..++++|+...+...
T Consensus 349 ~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 428 (668)
T 1kv9_A 349 EKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADA 428 (668)
T ss_dssp EEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGC
T ss_pred cccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCcccccc
Confidence 000 125677766654431
Q ss_pred ------eCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecC
Q psy4650 141 ------SEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHS 214 (381)
Q Consensus 141 ------~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~ 214 (381)
..++.|.-||+.+|+.++...... ..........+.+++.++.||.++. ||..+|+.+|....
T Consensus 429 ~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a----------~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 429 TDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHA----------YSADKGEALWQFEA 497 (668)
T ss_dssp CCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEE----------EETTTCCEEEEEEC
T ss_pred CCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchh----------hhhhcChhheEecC
Confidence 124789999999999988876542 2222333445677888888898888 89999999998765
Q ss_pred c
Q psy4650 215 E 215 (381)
Q Consensus 215 ~ 215 (381)
.
T Consensus 498 ~ 498 (668)
T 1kv9_A 498 Q 498 (668)
T ss_dssp S
T ss_pred C
Confidence 4
No 264
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.26 E-value=0.0018 Score=57.90 Aligned_cols=95 Identities=12% Similarity=-0.146 Sum_probs=72.9
Q ss_pred EEEEEcCCC----eEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEe----------CCCCEEEEeCCCCeeeEE
Q psy4650 94 YLISGADDR----LVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGS----------EDGSVRVWHSGTHRLEIS 159 (381)
Q Consensus 94 ~l~s~~~d~----~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~----------~d~~i~vwd~~~~~~~~~ 159 (381)
.+++...++ +|.+.|..+++.+..+.....+ .+.++|+++.++.+. .++.|.+||..+++.+.+
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~ 111 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD 111 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence 445555455 8889999999999998765556 799999999777765 368899999999999998
Q ss_pred EecC-------CcceEEEEEcCCCCEEEEEeC--CCeEEE
Q psy4650 160 LTYG-------LERVWTISSLKGSNNVAIGYD--EGSVLL 190 (381)
Q Consensus 160 ~~~~-------~~~v~~v~~~~~~~~l~~~~~--dg~v~i 190 (381)
+... ......+.++|+|+++.++.. +..+.+
T Consensus 112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V 151 (368)
T 1mda_H 112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGL 151 (368)
T ss_dssp EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEE
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEE
Confidence 8643 123557999999998888764 344555
No 265
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.25 E-value=0.016 Score=55.14 Aligned_cols=111 Identities=14% Similarity=0.156 Sum_probs=76.7
Q ss_pred EEEEEcCCCeEEEEECCCCeEEEEeccCC-------------CCE--------------------------EEEEEecCC
Q psy4650 94 YLISGADDRLVKIWDYQNKTCVQTLEGHG-------------QNI--------------------------SAVCFHPEL 134 (381)
Q Consensus 94 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~-------------~~v--------------------------~~~~~~p~~ 134 (381)
.++.++.+|.+.++|..+|+.+..+.... .++ ..++++|+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 56788899999999999998877654211 111 235778877
Q ss_pred CEEEEEe-------------------------------------CCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCC
Q psy4650 135 PIVITGS-------------------------------------EDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSN 177 (381)
Q Consensus 135 ~~l~s~~-------------------------------------~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~ 177 (381)
..+.... .++.|..||..+|+.+..+.... .+........+.
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg 476 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGG 476 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTT
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEEECCC
Confidence 6555442 35789999999999888876432 222222222345
Q ss_pred EEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCc
Q psy4650 178 NVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSE 215 (381)
Q Consensus 178 ~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~ 215 (381)
.+..++.||.+.. +|..+|+.+|.....
T Consensus 477 ~v~~g~~dg~l~a----------~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 477 LVWYATLDGYLKA----------LDNKDGKELWNFKMP 504 (571)
T ss_dssp EEEEECTTSEEEE----------EETTTCCEEEEEECS
T ss_pred EEEEEcCCCeEEE----------EECCCCCEEEEEeCC
Confidence 6666788888887 999999999997654
No 266
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.24 E-value=0.0056 Score=53.38 Aligned_cols=142 Identities=11% Similarity=0.022 Sum_probs=89.2
Q ss_pred EEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEEE
Q psy4650 49 KISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAV 128 (381)
Q Consensus 49 ~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~ 128 (381)
+..+..++.+..|++. ...+..+......+.++...+++. +..++ +.+..+| .++.....+......+.++
T Consensus 150 l~vgt~~~~l~~~d~~---g~~~~~~~~~~~~~~~~~~d~~g~---l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~ 220 (330)
T 3hxj_A 150 IYVGSNDNYLYAINPD---GTEKWRFKTNDAITSAASIGKDGT---IYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRP 220 (330)
T ss_dssp EEEECTTSEEEEECTT---SCEEEEEECSSCCCSCCEECTTCC---EEEES--SSEEEEC-TTSCEEEEECCSSCCCSCC
T ss_pred EEEEcCCCEEEEECCC---CCEeEEEecCCCceeeeEEcCCCE---EEEEe--CEEEEEC-CCCcEEEEEccCCcceece
Confidence 4556677899999985 223334444445566666655554 44455 7888999 7777777666555667888
Q ss_pred EEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEE
Q psy4650 129 CFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKI 208 (381)
Q Consensus 129 ~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~ 208 (381)
...+++... .++.++.+..+|. ++.....+......+.++...+++ .+..++.+|.+.. +|. ++..
T Consensus 221 ~~~~~g~l~-v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~----------~d~-~g~~ 286 (330)
T 3hxj_A 221 AISEDGTIY-VTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYA----------INP-DGTE 286 (330)
T ss_dssp EECTTSCEE-EEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEE----------ECT-TSCE
T ss_pred EECCCCeEE-EEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEE----------ECC-CCcE
Confidence 888877644 4556777888874 566666665443333444555455 3455666666655 776 5666
Q ss_pred EEEec
Q psy4650 209 IWARH 213 (381)
Q Consensus 209 ~~~~~ 213 (381)
+|...
T Consensus 287 ~~~~~ 291 (330)
T 3hxj_A 287 KWNFE 291 (330)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77654
No 267
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.19 E-value=0.001 Score=59.45 Aligned_cols=103 Identities=9% Similarity=-0.021 Sum_probs=73.6
Q ss_pred ceEEEEEecCC----eEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEE---------cCCCeEEEEECCCC
Q psy4650 46 IEYKISYQESS----RVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISG---------ADDRLVKIWDYQNK 112 (381)
Q Consensus 46 ~~~~~s~~~d~----~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~---------~~d~~v~vwd~~~~ 112 (381)
....++...++ ++.++|+.. ...+.++..-..+ .+.++|++.. +.++. ..+++|.+||..++
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t--~~v~~~i~vG~~P--~i~~spDg~~-lyVan~~~~r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGC--GVTLGHSLGAFLS--LAVAGHSGSD-FALASTSFARSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTT--TEEEEEEEECTTC--EEEECTTSSC-EEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred CeEEEECCccCCccceEEEEECCC--CeEEEEEeCCCCC--ceEECCCCCE-EEEEcccccccccCCCCCEEEEEECCCC
Confidence 34555555555 788999864 4566676644455 7999999884 23332 24789999999999
Q ss_pred eEEEEeccC-------CCCEEEEEEecCCCEEEEEeC--CCCEEE--EeCCC
Q psy4650 113 TCVQTLEGH-------GQNISAVCFHPELPIVITGSE--DGSVRV--WHSGT 153 (381)
Q Consensus 113 ~~~~~~~~~-------~~~v~~~~~~p~~~~l~s~~~--d~~i~v--wd~~~ 153 (381)
+.+..+..+ ......++++|+|++++.+.. +..+.+ +|..+
T Consensus 107 ~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 107 LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 998888643 123478999999998888764 456888 99876
No 268
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.12 E-value=0.011 Score=55.48 Aligned_cols=194 Identities=12% Similarity=0.048 Sum_probs=115.4
Q ss_pred CCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEe-e-eCCCccEEEEE------------------cCCCe
Q psy4650 44 DMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDY-Y-HGGDKPYLISG------------------ADDRL 103 (381)
Q Consensus 44 ~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~-~-~~~~~~~l~s~------------------~~d~~ 103 (381)
++....++...++.|-+.|+.......+..+.. ......+++ + |++. ++..+ ..++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~-g~~phg~~~~~~p~~~--~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-AKGIHGLRPQKWPRSN--YVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-CCSEEEEEECCSSBCS--EEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC-CCCCcceeeeecCCCc--EEEEecccccccCCCCcccccccccCce
Confidence 434444566667789999987532222224432 235778887 4 7776 55555 33568
Q ss_pred EEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCC--------------------------------------C
Q psy4650 104 VKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDG--------------------------------------S 145 (381)
Q Consensus 104 v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~--------------------------------------~ 145 (381)
+.+.|..+.+....+.-.. .-..++++|+|+++++.+.+. .
T Consensus 177 vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 9999999998888776433 336677899999887776442 4
Q ss_pred EEEEeCCC--Cee-eEEEecCCcceEEEEEcCCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCEEEE----EecC-ce
Q psy4650 146 VRVWHSGT--HRL-EISLTYGLERVWTISSLKGSNNVAIGY-DEGSVLLKVGREEPAVSMDVNGCKIIW----ARHS-EV 216 (381)
Q Consensus 146 i~vwd~~~--~~~-~~~~~~~~~~v~~v~~~~~~~~l~~~~-~dg~v~i~~~~~~~~~~~d~~~~~~~~----~~~~-~~ 216 (381)
|.+.|..+ +.. +..+... ....++.++|+|+++.+++ .++.+.+ +|..+..... .... -.
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsV----------id~~~~~~~~~~~l~~~~~v~ 324 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTV----------LDVTRFDAVFYENADPRSAVV 324 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEE----------EEGGGHHHHHHSCCCGGGGEE
T ss_pred EEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEE----------EECcccccccccccCcccceE
Confidence 77777776 444 3444322 2445789999999776655 5677777 6664321000 0000 00
Q ss_pred eecccccCCccccccCCceEEeeehHHHHHhccCCC
Q psy4650 217 QQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 217 ~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~ 252 (381)
....+...+..++|++||....+..-+.....|++.
T Consensus 325 ~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 325 AEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp ECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred EEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhh
Confidence 112223334446889999544455566666667653
No 269
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.10 E-value=0.063 Score=51.13 Aligned_cols=62 Identities=19% Similarity=0.261 Sum_probs=44.0
Q ss_pred CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCc
Q psy4650 143 DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSE 215 (381)
Q Consensus 143 d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~ 215 (381)
++.|.-||+.+|+.+........ +..-.....+.++..++.||.++. ||..+|+.+|.....
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~-~~~g~~~tagglvf~g~~dg~l~A----------~D~~tG~~lW~~~~~ 526 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLP-LWAGVLATAGNLVFTGTGDGYFKA----------FDAKSGKELWKFQTG 526 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC-CCSCCEEETTTEEEEECTTSEEEE----------EETTTCCEEEEEECS
T ss_pred cceEEEEECCCCCEEEEecCCCC-CcccceEeCCCEEEEECCCCcEEE----------EECCCCCEEEEecCC
Confidence 57899999999998887764321 111111123556777888888887 999999999997654
No 270
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.97 E-value=0.018 Score=55.88 Aligned_cols=150 Identities=13% Similarity=0.106 Sum_probs=91.7
Q ss_pred EEEEEecCCeEEEecCCCccceeeEeecccc----ccEEEEEeeeCCCccEEEEEcC------CCeEEEEECCCCeEEEE
Q psy4650 48 YKISYQESSRVKAFNPIQVATLILKTLYGHE----KGVNCVDYYHGGDKPYLISGAD------DRLVKIWDYQNKTCVQT 117 (381)
Q Consensus 48 ~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~----~~v~~~~~~~~~~~~~l~s~~~------d~~v~vwd~~~~~~~~~ 117 (381)
.++.++.++.+..+|..+. ..+....... ..+.+.....+ . .++.+.. ++.|..+|..+|+.+..
T Consensus 119 ~v~v~~~dg~l~alD~~tG--~~~W~~~~~~~~~~~~~~~~P~v~~-~--~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 119 KVYVGTLDGRLIALDAKTG--KAIWSQQTTDPAKPYSITGAPRVVK-G--KVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp EEEEECTTSEEEEEETTTC--CEEEEEECSCTTSSCBCCSCCEEET-T--EEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEEEEcCCCEEEEEECCCC--CEeeeeccCCCCCcceecCCCEEEC-C--EEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 4666778899999998643 3333332210 11111111112 2 3444432 68999999999998887
Q ss_pred eccC---CC----------------------------CEEEEEEecCCCEEEEEeCCC-------------------CEE
Q psy4650 118 LEGH---GQ----------------------------NISAVCFHPELPIVITGSEDG-------------------SVR 147 (381)
Q Consensus 118 ~~~~---~~----------------------------~v~~~~~~p~~~~l~s~~~d~-------------------~i~ 147 (381)
+... .. ....+++.|+...+..+..++ .|.
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~ 273 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSIL 273 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 7421 00 012468888888887776665 399
Q ss_pred EEeCCCCeeeEEEecCC---------cceEEEEEcCCCC---EEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEe
Q psy4650 148 VWHSGTHRLEISLTYGL---------ERVWTISSLKGSN---NVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWAR 212 (381)
Q Consensus 148 vwd~~~~~~~~~~~~~~---------~~v~~v~~~~~~~---~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~ 212 (381)
-+|..+|+.++.+.... ..........+|+ .++.++.+|.+.+ +|..+|+++|..
T Consensus 274 AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~----------lD~~tG~~l~~~ 340 (668)
T 1kv9_A 274 AIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYV----------LDRTNGKLISAE 340 (668)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEE----------EETTTCCEEEEE
T ss_pred EEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEE----------EECCCCCEeccc
Confidence 99999999998886521 1222222223554 5777788888888 777777777543
No 271
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.97 E-value=0.031 Score=48.53 Aligned_cols=165 Identities=9% Similarity=0.005 Sum_probs=103.7
Q ss_pred ccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEE-Eecc----CC--CCEEEEEE---ecCCCEEEEEe---
Q psy4650 75 YGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ-TLEG----HG--QNISAVCF---HPELPIVITGS--- 141 (381)
Q Consensus 75 ~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~-~~~~----~~--~~v~~~~~---~p~~~~l~s~~--- 141 (381)
.+..-.-.+++|++... .++++.-..++|..|+...+.... .+.+ .. ..+..+.| .|+++++++..
T Consensus 9 ~~~~~yPE~~~wd~~~g-~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQ-VFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp CCTTCCCSCEEEETTTT-EEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred cCcccCCcCccCcCCCC-EEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 33444556788877544 255565689999999997654332 3332 11 13578999 68877766543
Q ss_pred ----------CCCCEEEEeCC---CCeeeEEEec-------------CCcceEEEEEcCCCCEEEEEeCC-CeEEEEecC
Q psy4650 142 ----------EDGSVRVWHSG---THRLEISLTY-------------GLERVWTISSLKGSNNVAIGYDE-GSVLLKVGR 194 (381)
Q Consensus 142 ----------~d~~i~vwd~~---~~~~~~~~~~-------------~~~~v~~v~~~~~~~~l~~~~~d-g~v~i~~~~ 194 (381)
.+..|..+|+. +++.+..... .......++..++|+..++++.- +.|..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~r---- 163 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIAR---- 163 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEE----
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEE----
Confidence 26779999999 7877765542 11347899999999988888776 66655
Q ss_pred CCceEEEecCCC-EEEEEecCceeecccccCCccccccCCceEEeeehHHHHHhccCCC
Q psy4650 195 EEPAVSMDVNGC-KIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDIS 252 (381)
Q Consensus 195 ~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~d~~~~~~d~~ 252 (381)
+++++. ...|...... .....+.. .+++.|||..|......++.+.+|+.
T Consensus 164 ------V~pdG~~~~~~~~~~~~-~~~~~G~n-GIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 164 ------VSADGKTVSTFAWESGN-GGQRPGYS-GITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp ------ECTTSCCEEEEEECCCC-SSSCCSCS-EEEEETTTTEEEEESSSSSEEEEECS
T ss_pred ------EeCCCCEEeeeeecCCC-cccccCcc-eEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 566543 2334433221 11122222 25778999888877666666767765
No 272
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.93 E-value=0.067 Score=48.84 Aligned_cols=151 Identities=15% Similarity=0.119 Sum_probs=85.7
Q ss_pred cceeeeecC-CCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCC----eEEEEEC
Q psy4650 35 TKVDITTNK-DMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDR----LVKIWDY 109 (381)
Q Consensus 35 ~~~~i~~~~-~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~----~v~vwd~ 109 (381)
.|..+..++ +... |+.+...+.|+.+++.. ..+..+.........++|++++.. ++++....+ .+.+.+.
T Consensus 138 ~P~~lavdp~~~g~-Lyv~d~~~~I~~id~~~---~~v~~~~~~~~~P~~ia~d~~G~~-lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNH-LYLVGEQHPTRLIDFEK---EYVSTVYSGLSKVRTICWTHEADS-MIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEE-EEEEEBTEEEEEEETTT---TEEEEEECCCSCEEEEEECTTSSE-EEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCe-EEEEeCCCcEEEEECCC---CEEEEEecCCCCcceEEEeCCCCE-EEEEeCCCCcccceEEEEeC
Confidence 456666665 2333 33333337888898853 223333334556889999987762 334433222 2333343
Q ss_pred CCCeE-EEEeccCCCCEEEEEEec-CCCEEEEEeCCCCEEEEeCCCCeeeEEEec-CCcceEEEEEcCCCCEE-EEEeCC
Q psy4650 110 QNKTC-VQTLEGHGQNISAVCFHP-ELPIVITGSEDGSVRVWHSGTHRLEISLTY-GLERVWTISSLKGSNNV-AIGYDE 185 (381)
Q Consensus 110 ~~~~~-~~~~~~~~~~v~~~~~~p-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l-~~~~~d 185 (381)
..... ...+.. ......++++| ++.++++-..++.|..+|..++........ .......++++|+|+++ ++-..+
T Consensus 213 ~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 213 ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCC
Confidence 22111 122221 12347788999 666666666678999999987765222221 22457789999999954 444456
Q ss_pred CeEEEE
Q psy4650 186 GSVLLK 191 (381)
Q Consensus 186 g~v~i~ 191 (381)
+.|..+
T Consensus 292 ~~I~~~ 297 (430)
T 3tc9_A 292 HYILRS 297 (430)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 667663
No 273
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=96.89 E-value=0.00037 Score=61.88 Aligned_cols=95 Identities=9% Similarity=0.067 Sum_probs=72.5
Q ss_pred HHHHhhhhhhccccce------eeEEEe--cccCCcccccccChHHHHHHHHHHhhhhhhhhHhhhccccceeeEeecc-
Q psy4650 262 RAAAETCMHVLSTLQS------SNVFVE--SLYDGLDFHHNVSRARFESLIGGLLTSFVQPCMHVLSTLQSSNVFVESL- 332 (381)
Q Consensus 262 ~~~~e~ak~~lS~~~~------~~i~~~--~l~~g~~~~~~itr~~fe~l~~~l~~~~~~~~~~~Ls~~~~~~~~~~~~- 332 (381)
...+|++|+.++.... ..+.++ .+.+|.++..+++|++|++++.+++.++.+.++++|..... .+..+.+
T Consensus 200 ~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~-~~~~~~~~ 278 (344)
T 1jce_A 200 ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPP-ELVSDIIE 278 (344)
T ss_dssp HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCH-HHHHHHHH
T ss_pred HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCc-hhccchhh
Confidence 3567889999887542 244443 45678778889999999999999999999999999987421 0111223
Q ss_pred ccCcceEEeecHHHHHHHHHHHHHH
Q psy4650 333 YDGLDFHHNVSRARFESLIGGLLTS 357 (381)
Q Consensus 333 ~~~~~~~~~~~~~~~e~~~~~~~~~ 357 (381)
...+++||+.+.|.|++++++.|+.
T Consensus 279 ~~IvL~GG~s~~p~l~~~l~~~~~~ 303 (344)
T 1jce_A 279 RGIFLTGGGSLLRGLDTLLQKETGI 303 (344)
T ss_dssp HCEEEESGGGCSBTHHHHHHHHHSS
T ss_pred CcEEEECccccchHHHHHHHHHHCC
Confidence 4678899999999999999999973
No 274
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.87 E-value=0.14 Score=45.89 Aligned_cols=152 Identities=7% Similarity=-0.100 Sum_probs=86.7
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
+..+..++....+.++-...+.|..+++.... ....+.........+++.+.+.. ++++-...+.|.+.+.......
T Consensus 118 ~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~--~~~~~~~~~~~p~glavd~~~g~-lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 118 AIALDFHHRRELVFWSDVTLDRILRANLNGSN--VEEVVSTGLESPGGLAVDWVHDK-LYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCC--EEEEECSSCSCCCCEEEETTTTE-EEEEETTTTEEEECBTTSCSCE
T ss_pred cEEEEEecCCCeEEEEeCCCCcEEEEecCCCC--cEEEEeCCCCCccEEEEEeCCCe-EEEEcCCCCeEEEEeCCCCceE
Confidence 45566555445555565666778778775322 11112222234566777765442 5566667788888887755433
Q ss_pred EEeccCCCCEEEEEEecCCCEEEEEeC-C-CCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEE-eCCCeEEE
Q psy4650 116 QTLEGHGQNISAVCFHPELPIVITGSE-D-GSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIG-YDEGSVLL 190 (381)
Q Consensus 116 ~~~~~~~~~v~~~~~~p~~~~l~s~~~-d-~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~-~~dg~v~i 190 (381)
..+...-.....++++|.+..|..... . +.|..+++............-.....++++|.+..|..+ +..+.|..
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~ 272 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 272 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEE
Confidence 333333345689999997776555543 3 678888876543333233333456788888765544333 33344444
No 275
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.86 E-value=0.24 Score=44.59 Aligned_cols=154 Identities=8% Similarity=-0.111 Sum_probs=87.7
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCcc--ceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVA--TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~--~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
+..+..+.....+.++-...+.|+.+++.... ......+.........+++.+.+.. +.++-...+.|.+.+.....
T Consensus 114 ~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~-lY~~d~~~~~I~~~~~~g~~ 192 (400)
T 3p5b_L 114 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN-IYWTDSVLGTVSVADTKGVK 192 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTE-EEEEETTTTEEEEECTTTCS
T ss_pred ceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCc-eEEEECCCCeEEEEeCCCCc
Confidence 44555554444444454555667667664211 1111222223456678888764442 55666778899999987665
Q ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeC--CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEe-CCCeEEE
Q psy4650 114 CVQTLEGHGQNISAVCFHPELPIVITGSE--DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGY-DEGSVLL 190 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~-~dg~v~i 190 (381)
....+...-.....++++|.+..|..... .+.|...++............-.....++++|.+..|..+. ..+.|..
T Consensus 193 ~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~ 272 (400)
T 3p5b_L 193 RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 272 (400)
T ss_dssp EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEE
Confidence 44444433445689999997776655543 46888888875443333333335677888887665554443 3344444
No 276
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.83 E-value=0.092 Score=50.07 Aligned_cols=62 Identities=15% Similarity=0.218 Sum_probs=42.6
Q ss_pred CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCc
Q psy4650 143 DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSE 215 (381)
Q Consensus 143 d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~ 215 (381)
++.+.-||+.+|+.+....... ....-.....+.++..++.||.++. +|..+|+.+|.....
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagg~vf~gt~dg~l~A----------~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMERF-AVWGGTMATAGDLVFYGTLDGYLKA----------RDSDTGDLLWKFKIP 513 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEE----------EETTTCCEEEEEECS
T ss_pred cCeEEEEECCCCCEEeEecCCC-CccCcceEecCCEEEEECCCCeEEE----------EECCCCCEEEEeeCC
Confidence 4789999999999888775321 1111111223556666788888887 999999999997543
No 277
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.82 E-value=0.17 Score=42.31 Aligned_cols=150 Identities=8% Similarity=0.094 Sum_probs=88.2
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeec-cccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLY-GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~-~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 114 (381)
..-++..++...+.+....++.|...|+. ..+++.+. +-......+++.+++. ++++.-.++.+.++++.....
T Consensus 29 lSGla~~~~~~~L~aV~d~~~~I~~ld~~---g~v~~~i~l~g~~D~EGIa~~~~g~--~~vs~E~~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINKPAAIVEMTTN---GDLIRTIPLDFVKDLETIEYIGDNQ--FVISDERDYAIYVISLTPNSE 103 (255)
T ss_dssp EEEEEEETTTTEEEEEEETTEEEEEEETT---CCEEEEEECSSCSSEEEEEECSTTE--EEEEETTTTEEEEEEECTTCC
T ss_pred cceeEEeCCCCEEEEEECCCCeEEEEeCC---CCEEEEEecCCCCChHHeEEeCCCE--EEEEECCCCcEEEEEcCCCCe
Confidence 45566666655555556668888888875 44555542 2225677888876553 666666778888888765432
Q ss_pred ---EEEec------cCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCC---CeeeEEEe-------cCCcceEEEEEcCC
Q psy4650 115 ---VQTLE------GHGQNISAVCFHPELPIVITGSEDGSVRVWHSGT---HRLEISLT-------YGLERVWTISSLKG 175 (381)
Q Consensus 115 ---~~~~~------~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~---~~~~~~~~-------~~~~~v~~v~~~~~ 175 (381)
+.... ........++|+|.+..|..+.......+|.+.. +..+..+. .....+.+++++|.
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~ 183 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ 183 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETT
T ss_pred eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCC
Confidence 22221 1234568999999987666666554555555531 11122221 12235688999997
Q ss_pred CCEEEEEe-CCCeEEE
Q psy4650 176 SNNVAIGY-DEGSVLL 190 (381)
Q Consensus 176 ~~~l~~~~-~dg~v~i 190 (381)
...+..-+ ....+..
T Consensus 184 tg~lliLS~~s~~L~~ 199 (255)
T 3qqz_A 184 KNTLLVLSHESRALQE 199 (255)
T ss_dssp TTEEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCeEEE
Confidence 65544444 4444544
No 278
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.82 E-value=0.2 Score=43.39 Aligned_cols=145 Identities=11% Similarity=-0.040 Sum_probs=81.8
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEe-ecc-ccccEEEEEeee-CCCccEEEEEcC-----------
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKT-LYG-HEKGVNCVDYYH-GGDKPYLISGAD----------- 100 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~-l~~-h~~~v~~~~~~~-~~~~~~l~s~~~----------- 100 (381)
.|..+...++.+.+.++... +.+..+++.......+.. ..+ .......+++.+ ++. +.++-..
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~-~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~--l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCY-YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI--VYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp CEEEEEEETTTTEEEEEETT-TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC--EEEEESCSSCCTTCHHHH
T ss_pred CCceEEEcCCCCcEEEEECC-CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE--EEEECCccccccccccee
Confidence 46777776523444444333 458888875321111111 111 123467889988 775 4444322
Q ss_pred ------CCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEE-eCCCCEEEEeCCCCe--eeEEEecCCcceEEEE
Q psy4650 101 ------DRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITG-SEDGSVRVWHSGTHR--LEISLTYGLERVWTIS 171 (381)
Q Consensus 101 ------d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~-~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~v~ 171 (381)
++.|..||..++.......+ -.....++++|++..+..+ ...+.|.+|++.+.. ....+....+ ...++
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~ 235 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIK 235 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEE
T ss_pred hcccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeE
Confidence 36788888877764332222 1233679999999865544 556889999987521 1111111223 67788
Q ss_pred EcCCCCEEEEEeC
Q psy4650 172 SLKGSNNVAIGYD 184 (381)
Q Consensus 172 ~~~~~~~l~~~~~ 184 (381)
+.++|++.++...
T Consensus 236 ~d~~G~l~va~~~ 248 (322)
T 2fp8_A 236 RNADGHFWVSSSE 248 (322)
T ss_dssp ECTTSCEEEEEEE
T ss_pred ECCCCCEEEEecC
Confidence 8888876555443
No 279
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.74 E-value=0.093 Score=45.60 Aligned_cols=150 Identities=10% Similarity=-0.015 Sum_probs=88.4
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeec-----------------cccccEEEEEeee-CCCccEEE
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLY-----------------GHEKGVNCVDYYH-GGDKPYLI 96 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~-----------------~h~~~v~~~~~~~-~~~~~~l~ 96 (381)
.|..+...++ +.+++++..++.|..|++..........-. .......++++.+ ++. |.
T Consensus 20 ~p~~i~~d~~-g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~---l~ 95 (322)
T 2fp8_A 20 APNSFTFDST-NKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ---LY 95 (322)
T ss_dssp CCCCEECCTT-CSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE---EE
T ss_pred CceEEEEcCC-CCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc---EE
Confidence 4566776665 445667778889999988542211111000 1123578899987 443 44
Q ss_pred EEcCCCeEEEEECCCCeEEEEecc-----CCCCEEEEEEec-CCCEEEEEeC-----------------CCCEEEEeCCC
Q psy4650 97 SGADDRLVKIWDYQNKTCVQTLEG-----HGQNISAVCFHP-ELPIVITGSE-----------------DGSVRVWHSGT 153 (381)
Q Consensus 97 s~~~d~~v~vwd~~~~~~~~~~~~-----~~~~v~~~~~~p-~~~~l~s~~~-----------------d~~i~vwd~~~ 153 (381)
.+...+.+..+|..++.. ..+.. .......+++.| +|...++-.. ++.|..||..+
T Consensus 96 v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 96 IVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 444445578888765532 22211 112467899999 8886665432 36788888877
Q ss_pred CeeeEEEecCCcceEEEEEcCCCCEEEEE-eCCCeEEE
Q psy4650 154 HRLEISLTYGLERVWTISSLKGSNNVAIG-YDEGSVLL 190 (381)
Q Consensus 154 ~~~~~~~~~~~~~v~~v~~~~~~~~l~~~-~~dg~v~i 190 (381)
++....... ......++++|+|+.+..+ +.++.|..
T Consensus 175 ~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~ 211 (322)
T 2fp8_A 175 KETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVK 211 (322)
T ss_dssp TEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEE
T ss_pred CEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEE
Confidence 764332221 2334568999998865554 45566766
No 280
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.74 E-value=0.27 Score=43.32 Aligned_cols=152 Identities=7% Similarity=-0.108 Sum_probs=86.3
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
+..+..++....+.++-...+.|..+++...... ..+.........+++.+.+.. ++.+-...+.|.+.+.......
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~--~~~~~~~~~p~glavd~~~g~-ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVE--EVVSTGLESPGGLAVDWVHDK-LYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSCCCEEEEETTTTE-EEEEETTTTEEEEEETTSCSCE
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecCCCCce--EEEeCCCCCccEEEEecCCCe-EEEEcCCCCeEEEEcCCCCceE
Confidence 4555555544555555556677777777532211 112222234567888765442 5566677789999998765433
Q ss_pred EEeccCCCCEEEEEEecCCCEEEEEeC-C-CCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEe-CCCeEEE
Q psy4650 116 QTLEGHGQNISAVCFHPELPIVITGSE-D-GSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGY-DEGSVLL 190 (381)
Q Consensus 116 ~~~~~~~~~v~~~~~~p~~~~l~s~~~-d-~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~-~dg~v~i 190 (381)
..+...-.....++++|.+..+..... . +.|..+++............-.....++++|.+..|..+. ..+.|..
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~ 229 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 229 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEE
Confidence 333333345689999997765554443 3 6788888765432222222334567888887655444433 3344444
No 281
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.66 E-value=0.28 Score=42.49 Aligned_cols=154 Identities=9% Similarity=-0.098 Sum_probs=89.7
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCcc--ceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCC
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVA--TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK 112 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~--~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~ 112 (381)
.+..+..++....+.++-...+.|..+++.... ......+........++++.+.+.. +.++-...+.|.+.+....
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~-ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN-IYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTE-EEEEETTTTEEEEEETTSS
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCe-EEEEECCCCEEEEEeCCCC
Confidence 456677776556666666677889988875310 1111122222245578888765442 5566677889999998755
Q ss_pred eEEEEeccCCCCEEEEEEecCCCEEEEEeCC--CCEEEEeCCCCeeeEEE-ecCCcceEEEEEcCCCCEEEEEe-CCCeE
Q psy4650 113 TCVQTLEGHGQNISAVCFHPELPIVITGSED--GSVRVWHSGTHRLEISL-TYGLERVWTISSLKGSNNVAIGY-DEGSV 188 (381)
Q Consensus 113 ~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d--~~i~vwd~~~~~~~~~~-~~~~~~v~~v~~~~~~~~l~~~~-~dg~v 188 (381)
.....+...-.....++++|.+..+..+... +.|...++.... ...+ ...-.....++++|++..|..+. ..+.|
T Consensus 110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I 188 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 188 (316)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCCCCceEEEEeccCCEEEEEECCCCeE
Confidence 4333333333456899999977755554442 678888876433 3323 22334577888888765544433 33445
Q ss_pred EE
Q psy4650 189 LL 190 (381)
Q Consensus 189 ~i 190 (381)
..
T Consensus 189 ~~ 190 (316)
T 1ijq_A 189 SS 190 (316)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 282
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.62 E-value=0.29 Score=43.92 Aligned_cols=141 Identities=11% Similarity=0.063 Sum_probs=86.1
Q ss_pred CCceEEEEEecCCeEEEecCCCccceeeEeecc--ccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe--------
Q psy4650 44 DMIEYKISYQESSRVKAFNPIQVATLILKTLYG--HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT-------- 113 (381)
Q Consensus 44 ~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~--h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~-------- 113 (381)
++.++++..+ +.+|.-+......-..-.+.. --+.|..+..+|+|+ +||.. .+..|.|-.+..+.
T Consensus 31 n~t~i~~a~~--n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~--lLAl~-g~~~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 31 NGTRIVFIQD--NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGD--LLCLF-NDNEIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp TTTEEEEEET--TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSS--EEEEE-CSSEEEEEECCTTCSCCCCHHH
T ss_pred CCCEEEEEEC--CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCC--EEEEe-cCCeEEEEEecCccccCccccc
Confidence 3355554433 578877765322221222222 123578899999887 66655 46688888776321
Q ss_pred ----EEEEecc------CCCCEEEEEEecCC---CEEEEEeCCCCEEEEeCCCCe--eeEEEe---------cCCcceEE
Q psy4650 114 ----CVQTLEG------HGQNISAVCFHPEL---PIVITGSEDGSVRVWHSGTHR--LEISLT---------YGLERVWT 169 (381)
Q Consensus 114 ----~~~~~~~------~~~~v~~~~~~p~~---~~l~s~~~d~~i~vwd~~~~~--~~~~~~---------~~~~~v~~ 169 (381)
..+.+.- ...+|..+.|||-+ ..|++-..|+.|++||+.... +. .++ .....+.+
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEE
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEE
Confidence 1122221 24679999999954 478888999999999998521 11 222 12256788
Q ss_pred EEEcCCCCEEEEEe--CCCeEEE
Q psy4650 170 ISSLKGSNNVAIGY--DEGSVLL 190 (381)
Q Consensus 170 v~~~~~~~~l~~~~--~dg~v~i 190 (381)
++|.+++-.|...+ ..|.|.-
T Consensus 185 ~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 185 LEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EEECTTSSCEEEEECTTSCEEEE
T ss_pred EEEcCCCcEEEEEecCCCCCEEE
Confidence 88988776555544 6666655
No 283
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.57 E-value=0.08 Score=50.51 Aligned_cols=150 Identities=12% Similarity=0.073 Sum_probs=90.7
Q ss_pred EEEEecCCeEEEecCCCccceeeEe--eccccc--cEEEEEeeeCCCccEEEEEc------CCCeEEEEECCCCeEEEEe
Q psy4650 49 KISYQESSRVKAFNPIQVATLILKT--LYGHEK--GVNCVDYYHGGDKPYLISGA------DDRLVKIWDYQNKTCVQTL 118 (381)
Q Consensus 49 ~~s~~~d~~v~i~~~~~~~~~~~~~--l~~h~~--~v~~~~~~~~~~~~~l~s~~------~d~~v~vwd~~~~~~~~~~ 118 (381)
++.++.++.+..+|..+.. .+.. +..+.. .+.+-....++ .++.++ .++.|..+|..+|+.+..+
T Consensus 124 V~v~t~dg~l~AlDa~TG~--~~W~~~~~~~~~~~~~~ssP~v~~g---~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~ 198 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGE--TVWKVENSDIKVGSTLTIAPYVVKD---KVIIGSSGAELGVRGYLTAYDVKTGEQVWRA 198 (599)
T ss_dssp EEEECTTSEEEEEETTTCC--EEEEEECCCGGGTCBCCSCCEEETT---EEEECCBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred EEEEcCCCEEEEEECCCCC--EEEeecCCCCCccceeecCCEEECC---EEEEEecccccCCCCeEEEEECCCCcEEEEE
Confidence 6667788899999886432 2232 222111 22211111122 344444 4899999999999988776
Q ss_pred ccCCCC-------------------------------------E-EEEEEecCCCEEEEEeCC----------------C
Q psy4650 119 EGHGQN-------------------------------------I-SAVCFHPELPIVITGSED----------------G 144 (381)
Q Consensus 119 ~~~~~~-------------------------------------v-~~~~~~p~~~~l~s~~~d----------------~ 144 (381)
...... + ...++.+....+..+..+ +
T Consensus 199 ~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~ 278 (599)
T 1w6s_A 199 YATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTM 278 (599)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSS
T ss_pred cCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccc
Confidence 532110 0 134566777776666554 3
Q ss_pred CEEEEeCCCCeeeEEEecCCcce---------EEEEEc-CCC---CEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEE
Q psy4650 145 SVRVWHSGTHRLEISLTYGLERV---------WTISSL-KGS---NNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWA 211 (381)
Q Consensus 145 ~i~vwd~~~~~~~~~~~~~~~~v---------~~v~~~-~~~---~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~ 211 (381)
.|.-+|..+|+.+..+....... .-+... .+| ..++.++.+|.+.+ +|..+|+++|.
T Consensus 279 sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~----------lD~~tG~~lw~ 348 (599)
T 1w6s_A 279 TIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYT----------LDRTDGALVSA 348 (599)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEE----------EETTTCCEEEE
T ss_pred eEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEE----------EECCCCCEeec
Confidence 79999999999998876532211 111111 345 35566677777766 99999999998
Q ss_pred ec
Q psy4650 212 RH 213 (381)
Q Consensus 212 ~~ 213 (381)
..
T Consensus 349 ~~ 350 (599)
T 1w6s_A 349 NK 350 (599)
T ss_dssp EE
T ss_pred cc
Confidence 65
No 284
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.52 E-value=0.0078 Score=59.37 Aligned_cols=99 Identities=11% Similarity=0.027 Sum_probs=64.9
Q ss_pred cEEEEEee-eCCCccEEE-EEcCC----CeEEEEECCCC-eEEE-EeccCCCCEEEEEEecCCCEEEEEeCC-----CCE
Q psy4650 80 GVNCVDYY-HGGDKPYLI-SGADD----RLVKIWDYQNK-TCVQ-TLEGHGQNISAVCFHPELPIVITGSED-----GSV 146 (381)
Q Consensus 80 ~v~~~~~~-~~~~~~~l~-s~~~d----~~v~vwd~~~~-~~~~-~~~~~~~~v~~~~~~p~~~~l~s~~~d-----~~i 146 (381)
.+.+..|| |+|. +|+ +.+.+ .+|+++|+.++ +.+. .+. .....++|+|+|+.|+....| ..|
T Consensus 175 ~~~~~~~S~PDG~--~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHD--LVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTC--EEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCC--EEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 67889999 9987 454 32322 35999999988 6321 111 113468899999877766554 358
Q ss_pred EEEeCCCCee--eEEEec-CCcceEEEEEcCCCCEEEEEe
Q psy4650 147 RVWHSGTHRL--EISLTY-GLERVWTISSLKGSNNVAIGY 183 (381)
Q Consensus 147 ~vwd~~~~~~--~~~~~~-~~~~v~~v~~~~~~~~l~~~~ 183 (381)
..+++.++.. ...+.. .......+.|+|+|++|+..+
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence 8888887642 222222 223456789999999887765
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.51 E-value=0.43 Score=47.09 Aligned_cols=154 Identities=8% Similarity=-0.111 Sum_probs=88.2
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCcc--ceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVA--TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~--~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
+..+........+.++-...+.|+.+++.... ......+.........|++.+.+.. ++++-...+.|.+.++....
T Consensus 426 ~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~-LY~tD~~~~~I~v~~ldG~~ 504 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN-IYWTDSVLGTVSVADTKGVK 504 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTE-EEEEETTTTEEEEEETTSSS
T ss_pred eEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCc-EEEEecCCCeEEEEeCCCCe
Confidence 34455554434444555555667766664211 0111222223455667888776553 66677778899999987655
Q ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeC--CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEe-CCCeEEE
Q psy4650 114 CVQTLEGHGQNISAVCFHPELPIVITGSE--DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGY-DEGSVLL 190 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~-~dg~v~i 190 (381)
....+...-.....|+++|.+..|..... .+.|...++.+......+...-.....|++++.+..|..+. ..+.|..
T Consensus 505 ~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~ 584 (791)
T 3m0c_C 505 RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 584 (791)
T ss_dssp EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEE
Confidence 43434334445789999998766655543 36788888875544333333335678888887655544443 3334444
No 286
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.50 E-value=0.43 Score=42.70 Aligned_cols=134 Identities=6% Similarity=-0.074 Sum_probs=76.2
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCC-CeEEEEECCCCeE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADD-RLVKIWDYQNKTC 114 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d-~~v~vwd~~~~~~ 114 (381)
|..+..+.....+.++-...+.|.++++...... ..+.........+++.|.+.. ++.+-... +.|...+......
T Consensus 161 p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~--~l~~~~l~~P~giavdp~~g~-ly~td~~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 161 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK--VLLWQSLEKPRAIALHPMEGT-IYWTDWGNTPRIEASSMDGSGR 237 (386)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE--EEECSSCSCEEEEEEETTTTE-EEEEECSSSCEEEEEETTSCSC
T ss_pred ccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE--EeecCCCCCCcEEEEEcCCCe-EEEeccCCCCEEEEEeCCCCCc
Confidence 4445555444555556666678888887532211 122233456788999886553 44444444 7888888765443
Q ss_pred EEEeccCCCCEEEEEEecCCCEEEEE-eCCCCEEEEeCCCCeeeEEEecCCcceEEEEE
Q psy4650 115 VQTLEGHGQNISAVCFHPELPIVITG-SEDGSVRVWHSGTHRLEISLTYGLERVWTISS 172 (381)
Q Consensus 115 ~~~~~~~~~~v~~~~~~p~~~~l~s~-~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~ 172 (381)
.......-.....++++|++..|..+ ...+.|..+|+........+.........+++
T Consensus 238 ~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav 296 (386)
T 3v65_B 238 RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV 296 (386)
T ss_dssp EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE
T ss_pred EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE
Confidence 33333333456899999877765554 44678999998754332223222233444444
No 287
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.46 E-value=0.47 Score=42.69 Aligned_cols=131 Identities=11% Similarity=-0.005 Sum_probs=80.4
Q ss_pred EEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCC----eEEEEeccCCC
Q psy4650 48 YKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK----TCVQTLEGHGQ 123 (381)
Q Consensus 48 ~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~----~~~~~~~~~~~ 123 (381)
+++.+. ...|+..++.... ...+......+..++|++.+.. ++.+-...+.|..+++... .....+.....
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~---~~~~~~~~~~~~~l~~d~~~~~-lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 159 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSE---YTSLIPNLRNVVALDTEVASNR-IYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 159 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCS---CEEEECSCSCEEEEEEETTTTE-EEEEETTTTEEEEEEC------CCCEEEECSSCS
T ss_pred eeEEec-cceeEEEccCCcc---eeEeccccCcceEEeeeeccCc-eEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC
Confidence 444433 3588888886422 2223334567889999986553 5556667788988888652 22333333344
Q ss_pred CEEEEEEecCCCEE-EEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEe
Q psy4650 124 NISAVCFHPELPIV-ITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGY 183 (381)
Q Consensus 124 ~v~~~~~~p~~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~ 183 (381)
....+++.+.+..| .+-...+.|.+.++.+......+...-.....++++|.+..+....
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td 220 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD 220 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEE
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEe
Confidence 66889999855544 4445578899999886654444444445678899998655544443
No 288
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.46 E-value=0.042 Score=54.17 Aligned_cols=141 Identities=9% Similarity=-0.051 Sum_probs=78.4
Q ss_pred eeeec-CCCceEEEEEecCC----eEEEecCCCc-cceeeEeeccccccEEEEEeeeCCCccEEEEEcCC-----CeEEE
Q psy4650 38 DITTN-KDMIEYKISYQESS----RVKAFNPIQV-ATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADD-----RLVKI 106 (381)
Q Consensus 38 ~i~~~-~~~~~~~~s~~~d~----~v~i~~~~~~-~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d-----~~v~v 106 (381)
....+ +++..+.++...+| +|+++|+... . .....+. ....++.|+|++. .|+....| ..|.+
T Consensus 178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~-~l~~~~~---~~~~~~~WspDg~--~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQ-TIADKVS---GTNGEIVWGPDHT--SLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTC-CCCCCEE---EECSCCEECSSTT--EEEEEEECTTCCEEEEEE
T ss_pred eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCE-eCCcccc---CceeeEEEecCCC--EEEEEEECCCCCCCEEEE
Confidence 45567 77665555555443 4889998653 2 1111111 1234678999987 34444443 36778
Q ss_pred EECCCCe--EEEEecc-CCCCEEEEEEecCCCEEEEEeC---CCCEEEEeCCCCe-ee--EEE-ecCCcceEEEEEcCCC
Q psy4650 107 WDYQNKT--CVQTLEG-HGQNISAVCFHPELPIVITGSE---DGSVRVWHSGTHR-LE--ISL-TYGLERVWTISSLKGS 176 (381)
Q Consensus 107 wd~~~~~--~~~~~~~-~~~~v~~~~~~p~~~~l~s~~~---d~~i~vwd~~~~~-~~--~~~-~~~~~~v~~v~~~~~~ 176 (381)
+++.++. ....+.+ .......+.|+|+|++|+..+. ...|.++|+.++. .. ..+ ........++.|+.++
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 8887763 2233332 2344678899999997765542 4468888988752 12 222 2233444555554444
Q ss_pred CEEEEEeC
Q psy4650 177 NNVAIGYD 184 (381)
Q Consensus 177 ~~l~~~~~ 184 (381)
.+++....
T Consensus 332 ~l~~~t~~ 339 (751)
T 2xe4_A 332 HLVILTNE 339 (751)
T ss_dssp EEEEEECT
T ss_pred EEEEEeCC
Confidence 44444433
No 289
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.43 E-value=0.4 Score=41.52 Aligned_cols=124 Identities=10% Similarity=-0.025 Sum_probs=74.5
Q ss_pred CeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCC----CeEEEEeccCCCCEEEEEEe
Q psy4650 56 SRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN----KTCVQTLEGHGQNISAVCFH 131 (381)
Q Consensus 56 ~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~----~~~~~~~~~~~~~v~~~~~~ 131 (381)
..|+..++.... ....+ .......+++|++.+.. ++.+-...+.|..++..+ ......+...-.....+++.
T Consensus 10 ~~I~~i~~~~~~--~~~~~-~~~~~p~g~~~d~~~~~-ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd 85 (316)
T 1ijq_A 10 HEVRKMTLDRSE--YTSLI-PNLRNVVALDTEVASNR-IYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 85 (316)
T ss_dssp SSEEEEETTSCC--CEEEE-CSCSSEEEEEEETTTTE-EEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred CeEEEEECCCcc--eEehh-cCCCceEEEEEEeCCCE-EEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEe
Confidence 468888876422 22222 23456789999886553 556667788999999876 22222233222345788998
Q ss_pred cCCCEE-EEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEe
Q psy4650 132 PELPIV-ITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGY 183 (381)
Q Consensus 132 p~~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~ 183 (381)
+.+..+ .+-...+.|.+.|+.+......+.........++++|.+..+..+.
T Consensus 86 ~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 86 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred ecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEc
Confidence 765544 4445678899999876543333333345678899998655444433
No 290
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.41 E-value=0.31 Score=42.28 Aligned_cols=149 Identities=7% Similarity=0.002 Sum_probs=95.2
Q ss_pred eeeecCCCceEEEEEecCCeEEEecCCCccceeeEeecc----ccc--cEEEEEe---eeCCCccEEEEEc---------
Q psy4650 38 DITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYG----HEK--GVNCVDY---YHGGDKPYLISGA--------- 99 (381)
Q Consensus 38 ~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~----h~~--~v~~~~~---~~~~~~~~l~s~~--------- 99 (381)
.+.++.....+.++.-..++|..|++.......+ .+.+ ..+ .+.++.| .|++ ++++...
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~g--rL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSK--RLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCC--EEEEEEEETTTTCTTS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCC--cEEEEEcccccccccc
Confidence 4445555566777777899999999964222222 3433 111 3578888 5653 3555432
Q ss_pred ----CCCeEEEEECC---CCeEEEEec--cC-----------CCCEEEEEEecCCCEEEEEeCC-CCEEEEeCCCCeeeE
Q psy4650 100 ----DDRLVKIWDYQ---NKTCVQTLE--GH-----------GQNISAVCFHPELPIVITGSED-GSVRVWHSGTHRLEI 158 (381)
Q Consensus 100 ----~d~~v~vwd~~---~~~~~~~~~--~~-----------~~~v~~~~~~p~~~~l~s~~~d-~~i~vwd~~~~~~~~ 158 (381)
.+..|..+|+. +++.+.... .. ......++..++|+.-++++.. +.|...+.... ...
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~ 172 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVS 172 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEe
Confidence 26789999998 776554432 11 1247889999999988877777 77777776544 222
Q ss_pred EEec------CCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 159 SLTY------GLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 159 ~~~~------~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
.+.. .....+.++++|+|..|++....|.+..
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~ 210 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTA 210 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEE
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEE
Confidence 2211 1123568999999998888766777766
No 291
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.41 E-value=0.16 Score=48.19 Aligned_cols=154 Identities=10% Similarity=0.055 Sum_probs=88.9
Q ss_pred EEEEEecCCeEEEecCCCccceeeEeeccccc--cEEEEEeeeCCCccEEEEEcC------CCeEEEEECCCCeEEEEec
Q psy4650 48 YKISYQESSRVKAFNPIQVATLILKTLYGHEK--GVNCVDYYHGGDKPYLISGAD------DRLVKIWDYQNKTCVQTLE 119 (381)
Q Consensus 48 ~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~--~v~~~~~~~~~~~~~l~s~~~------d~~v~vwd~~~~~~~~~~~ 119 (381)
.++.++.++.+..+|..+....=...+.++.. .+.+-....+ . .++.++. ++.|..+|..+|+.+..+.
T Consensus 117 ~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~-g--~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 117 QIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAK-D--TVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEET-T--EEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEEC-C--EEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 46666778899999986432221122222211 1221111112 2 3444443 7999999999999887765
Q ss_pred cCCCC-------------------------------------E-EEEEEecCCCEEEEEeCC----------------CC
Q psy4650 120 GHGQN-------------------------------------I-SAVCFHPELPIVITGSED----------------GS 145 (381)
Q Consensus 120 ~~~~~-------------------------------------v-~~~~~~p~~~~l~s~~~d----------------~~ 145 (381)
..... + ..+++.+....+..+..+ +.
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 32110 0 135667766666555432 25
Q ss_pred EEEEeCCCCeeeEEEecCCc---------ceEEEEEcCCCC---EEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEec
Q psy4650 146 VRVWHSGTHRLEISLTYGLE---------RVWTISSLKGSN---NVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARH 213 (381)
Q Consensus 146 i~vwd~~~~~~~~~~~~~~~---------~v~~v~~~~~~~---~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~ 213 (381)
|.-+|..+|+.+..+..... ...-+...++|+ .++.++.+|.+.+ +|..+|+++|...
T Consensus 274 v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~----------lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYT----------LNRENGNLIVAEK 343 (571)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEE----------EETTTCCEEEEEE
T ss_pred EEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEE----------EECCCCCEEeeec
Confidence 99999999999888764211 111112223453 4556666776666 9999999999864
Q ss_pred C
Q psy4650 214 S 214 (381)
Q Consensus 214 ~ 214 (381)
.
T Consensus 344 ~ 344 (571)
T 2ad6_A 344 V 344 (571)
T ss_dssp S
T ss_pred c
Confidence 3
No 292
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.22 E-value=0.31 Score=40.74 Aligned_cols=117 Identities=6% Similarity=0.029 Sum_probs=80.4
Q ss_pred EeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEecc-CCCCEEEEEEecCCCEEEEEeCCCCEEEEe
Q psy4650 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEG-HGQNISAVCFHPELPIVITGSEDGSVRVWH 150 (381)
Q Consensus 72 ~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd 150 (381)
+.+.|-.+.+..++|+|++. .+++....++.|...|.. ++.++.+.- -......+++.+++.++++.-.++.+.+++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~-~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSN-TLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp EECTTCCSCEEEEEEETTTT-EEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred eECCCcccCcceeEEeCCCC-EEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 45667777899999999765 355556678899999988 776666632 124568889988887767665678899998
Q ss_pred CCCCee---eEEEe------cCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 151 SGTHRL---EISLT------YGLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 151 ~~~~~~---~~~~~------~~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
+..... +.... ........++|+|.+..|.++.......+
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i 146 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEV 146 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceE
Confidence 765442 22221 12334689999999877777666555444
No 293
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.20 E-value=0.64 Score=42.26 Aligned_cols=116 Identities=9% Similarity=0.040 Sum_probs=66.9
Q ss_pred hcceeeeecCCCceEEEEEecCC----eEEEecCCCccceeeEeeccccccEEEEEeee-CCCccEEEEEcCCCeEEEEE
Q psy4650 34 ETKVDITTNKDMIEYKISYQESS----RVKAFNPIQVATLILKTLYGHEKGVNCVDYYH-GGDKPYLISGADDRLVKIWD 108 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~----~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~-~~~~~~l~s~~~d~~v~vwd 108 (381)
..|+.+...+++..+.++...++ .+..++... .......+. ......+++++| ++. ++++-..++.|..++
T Consensus 179 ~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-~~~~~~~l~-~~~~p~giavdp~~g~--lyv~d~~~~~V~~~~ 254 (430)
T 3tc9_A 179 SKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-GFKVITELT-KGQNCNGAETHPINGE--LYFNSWNAGQVFRYD 254 (430)
T ss_dssp SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG-TSCSEEEEE-ECSSCCCEEECTTTCC--EEEEETTTTEEEEEE
T ss_pred CCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC-ceeeeeeec-cCCCceEEEEeCCCCE--EEEEECCCCEEEEEE
Confidence 45777777776553444443222 233344321 111112222 123456778888 444 666666788999999
Q ss_pred CCCCeEEEEecc-CCCCEEEEEEecCCCEE-EEEeCCCCEEEEeCCC
Q psy4650 109 YQNKTCVQTLEG-HGQNISAVCFHPELPIV-ITGSEDGSVRVWHSGT 153 (381)
Q Consensus 109 ~~~~~~~~~~~~-~~~~v~~~~~~p~~~~l-~s~~~d~~i~vwd~~~ 153 (381)
..++........ ....-..++|+|++..+ ++-...+.|..++...
T Consensus 255 ~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 255 FTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 987764222221 12345789999999954 4445578899887653
No 294
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.14 E-value=0.63 Score=40.93 Aligned_cols=117 Identities=4% Similarity=-0.121 Sum_probs=71.0
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCC-CeEEEEECCCCeE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADD-RLVKIWDYQNKTC 114 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d-~~v~vwd~~~~~~ 114 (381)
|..+..+.....+.++-...+.|.++++....... .+.........+++.|.+.. ++.+-... +.|...+......
T Consensus 118 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~--l~~~~l~~P~~iavdp~~g~-ly~td~~~~~~I~r~~~dG~~~ 194 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV--LLWQSLEKPRAIALHPMEGT-IYWTDWGNTPRIEASSMDGSGR 194 (349)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE--EECTTCSCEEEEEEETTTTE-EEEEECSSSCEEEEEETTSCSC
T ss_pred ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE--EEeCCCCCcceEEEecCcCe-EEEeccCCCCEEEEEeCCCCCc
Confidence 44555555445555666667788888875322111 12233456788999986552 44454445 7888888765433
Q ss_pred EEEeccCCCCEEEEEEecCCCEEEEE-eCCCCEEEEeCCCCe
Q psy4650 115 VQTLEGHGQNISAVCFHPELPIVITG-SEDGSVRVWHSGTHR 155 (381)
Q Consensus 115 ~~~~~~~~~~v~~~~~~p~~~~l~s~-~~d~~i~vwd~~~~~ 155 (381)
...+...-.....++++|++..|..+ ...+.|..+|+....
T Consensus 195 ~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~ 236 (349)
T 3v64_C 195 RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH 236 (349)
T ss_dssp EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc
Confidence 22222233456899999977766555 446789999987543
No 295
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.14 E-value=0.62 Score=40.80 Aligned_cols=134 Identities=11% Similarity=0.163 Sum_probs=85.9
Q ss_pred EEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeC----CCc--cEEEEEcC--CCeEEEEECC--CCeEEEE
Q psy4650 48 YKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHG----GDK--PYLISGAD--DRLVKIWDYQ--NKTCVQT 117 (381)
Q Consensus 48 ~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~----~~~--~~l~s~~~--d~~v~vwd~~--~~~~~~~ 117 (381)
.+++..+.+.+.+||+ ..+.++.+.. +.++.+..-|+ +.. ..+++.-. +.+|.+|++. ++. +..
T Consensus 42 ~ii~t~k~~gL~Vydl---~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL---DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp EEEEEETTTEEEEEET---TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred EEEEEcCCCCEEEEcC---CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 4555566789999999 3566677754 56677766551 211 12445555 6899999763 333 444
Q ss_pred ecc------CC-CCEEEEEE--ecC-CC-EEEEEeCCCCEEEEeCC-------CCeeeEEEecCCcceEEEEEcCCCCEE
Q psy4650 118 LEG------HG-QNISAVCF--HPE-LP-IVITGSEDGSVRVWHSG-------THRLEISLTYGLERVWTISSLKGSNNV 179 (381)
Q Consensus 118 ~~~------~~-~~v~~~~~--~p~-~~-~l~s~~~d~~i~vwd~~-------~~~~~~~~~~~~~~v~~v~~~~~~~~l 179 (381)
+.. .. ..+..+++ +|. +. ++.....+|.+..|++. +++.++++... ..+..+...+....|
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~L 194 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRL 194 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeE
Confidence 422 11 34455666 674 44 57777888999999882 34556666644 467788888888888
Q ss_pred EEEeCCCeE
Q psy4650 180 AIGYDEGSV 188 (381)
Q Consensus 180 ~~~~~dg~v 188 (381)
..+-.+.-|
T Consensus 195 yv~eEd~GI 203 (355)
T 3amr_A 195 YIAEEDEAI 203 (355)
T ss_dssp EEEETTTEE
T ss_pred EEecccceE
Confidence 888877543
No 296
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.02 E-value=0.092 Score=49.98 Aligned_cols=77 Identities=16% Similarity=0.100 Sum_probs=52.3
Q ss_pred CCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcce-EEEEEcCCCC
Q psy4650 100 DDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERV-WTISSLKGSN 177 (381)
Q Consensus 100 ~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v-~~v~~~~~~~ 177 (381)
.+|.|..||..+++.+.....+. ++..-.....+.+++.++.|+.++.||..+|+.+..+....... .-+.|..+|+
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~ 541 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE 541 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred CcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence 36889999999999887765432 22221222346677889999999999999999999887643321 1244445554
No 297
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.01 E-value=0.68 Score=40.16 Aligned_cols=153 Identities=5% Similarity=-0.117 Sum_probs=86.7
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
+..+.+......+..+-...+.|..+++...... ...+........++++.+.+.. ++.+-...+.|.+++.......
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~-~~~~~~~l~~p~glavd~~~g~-ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV-QNVVVSGLLSPDGLACDWLGEK-LYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC-CEEEEECCSCCCEEEEETTTTE-EEEEETTTTEEEEEETTSCSCE
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce-EEEEcCCCCCccEEEEEcCCCe-EEEEECCCCEEEEEECCCCcEE
Confidence 4455555544555555566678888877542111 1112222234567788764442 5566667789999998755433
Q ss_pred EEeccCCCCEEEEEEecCCCEEEEEeC--CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEe-CCCeEEE
Q psy4650 116 QTLEGHGQNISAVCFHPELPIVITGSE--DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGY-DEGSVLL 190 (381)
Q Consensus 116 ~~~~~~~~~v~~~~~~p~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~-~dg~v~i 190 (381)
..+...-.....++++|.+..+..+.. .+.|...++............-.....++++|++..|..+. ..+.|..
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence 333333345689999997766655543 56788888764332222222334567888888655444333 3344444
No 298
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.00 E-value=0.61 Score=42.48 Aligned_cols=72 Identities=8% Similarity=0.057 Sum_probs=46.5
Q ss_pred ccEEEEEeee-CCCccEEEEEcCCCeEEEEECCCCeEEEEe-c-cCCCCEEEEEEecCCCEEEE-EeCCCCEEEEeCC
Q psy4650 79 KGVNCVDYYH-GGDKPYLISGADDRLVKIWDYQNKTCVQTL-E-GHGQNISAVCFHPELPIVIT-GSEDGSVRVWHSG 152 (381)
Q Consensus 79 ~~v~~~~~~~-~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~-~-~~~~~v~~~~~~p~~~~l~s-~~~d~~i~vwd~~ 152 (381)
.....++++| ++. +.++-..++.|+.++..++.....+ . +....-..++|+|++..|.. -...+.|+.++..
T Consensus 228 ~~P~giavd~~~G~--lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 228 RGAKTCAVHPQNGK--IYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp SSBCCCEECTTTCC--EEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCCEEEEeCCCCe--EEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 3445677877 444 5556667788999998877652222 2 11222357999999985544 4457789998865
No 299
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.94 E-value=1.4 Score=43.48 Aligned_cols=148 Identities=15% Similarity=0.108 Sum_probs=90.5
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeec---c-ccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCC
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLY---G-HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 111 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~---~-h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~ 111 (381)
.+++..++++. +-.|..++.+..|++....-....... + ....|.++...+++. |-.|..++-+..|+..+
T Consensus 312 i~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~---lWiGt~~~Gl~~~~~~~ 386 (795)
T 4a2l_A 312 VRSIFMDSQGG--MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN---LWIGTNDGGLNLYNPIT 386 (795)
T ss_dssp EEEEEECTTSC--EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC---EEEEESSSCEEEECTTT
T ss_pred EEEEEEeCCcC--EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC---EEEEECCCCeEEEcCCC
Confidence 44555555544 334555667888887432111111110 0 235688988877665 66677777788899887
Q ss_pred CeEEEEecc--------CCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEe----cCCcceEEEEEcCCCCEE
Q psy4650 112 KTCVQTLEG--------HGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLT----YGLERVWTISSLKGSNNV 179 (381)
Q Consensus 112 ~~~~~~~~~--------~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~----~~~~~v~~v~~~~~~~~l 179 (381)
+........ ....|.++...+++..+..|..++-+..||..+++...-.. .....|.++...++|.+.
T Consensus 387 ~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lw 466 (795)
T 4a2l_A 387 QRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLW 466 (795)
T ss_dssp CCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEE
T ss_pred CcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEE
Confidence 754332211 23578999988888845556666679999998876433221 134578899988888755
Q ss_pred EEEeCCCeEE
Q psy4650 180 AIGYDEGSVL 189 (381)
Q Consensus 180 ~~~~~dg~v~ 189 (381)
+.. .+|..+
T Consensus 467 igt-~~Gl~~ 475 (795)
T 4a2l_A 467 LGT-LSALVR 475 (795)
T ss_dssp EEE-SSCEEE
T ss_pred EEe-cCceeE
Confidence 544 355443
No 300
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.74 E-value=0.34 Score=44.15 Aligned_cols=150 Identities=9% Similarity=0.047 Sum_probs=84.2
Q ss_pred hcceeeeecCC--CceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCC---Ce-EEEE
Q psy4650 34 ETKVDITTNKD--MIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADD---RL-VKIW 107 (381)
Q Consensus 34 ~~~~~i~~~~~--~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d---~~-v~vw 107 (381)
..|..+...++ .+.+.++-.. +.|+.+++.. ..+..+.+......++++++++. ++++.... .. +...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~---g~v~~~~~~~~~P~giavd~dG~--lyVad~~~~~~~~gv~~~ 212 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVN---QYVDIKTTNIGQCADVNFTLNGD--MVVVDDQSSDTNTGIYLF 212 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBT-SCEEEEETTT---TEEEEECCCCSCEEEEEECTTCC--EEEEECCSCTTSEEEEEE
T ss_pred CCCceEEEccccCCCEEEEEeCC-CCEEEEECCC---CEEEEeecCCCCccEEEECCCCC--EEEEcCCCCcccceEEEE
Confidence 35777887763 3444444333 7899999843 22334444456688999999877 45554321 22 2222
Q ss_pred ECCCCeE-EEEeccCCCCEEEEEEec-CCCEEEEEeCCCCEEEEeCCCCeeeEEE-ec-CCcceEEEEEcCCCCEEEEE-
Q psy4650 108 DYQNKTC-VQTLEGHGQNISAVCFHP-ELPIVITGSEDGSVRVWHSGTHRLEISL-TY-GLERVWTISSLKGSNNVAIG- 182 (381)
Q Consensus 108 d~~~~~~-~~~~~~~~~~v~~~~~~p-~~~~l~s~~~d~~i~vwd~~~~~~~~~~-~~-~~~~v~~v~~~~~~~~l~~~- 182 (381)
+...+.. ...+. .-.....++++| ++.+.++-..++.|+.+|..++.....+ .. .......++++|+++.|..+
T Consensus 213 ~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 213 TRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp CGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred ECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 2221110 01111 112336688899 6666555556788999999877652222 21 22233469999999854444
Q ss_pred eCCCeEEE
Q psy4650 183 YDEGSVLL 190 (381)
Q Consensus 183 ~~dg~v~i 190 (381)
...+.|..
T Consensus 292 ~~~~~I~~ 299 (433)
T 4hw6_A 292 NGKHCIYR 299 (433)
T ss_dssp TTTTEEEE
T ss_pred CCCCEEEE
Confidence 44566666
No 301
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=95.63 E-value=0.0099 Score=54.02 Aligned_cols=94 Identities=9% Similarity=0.038 Sum_probs=71.4
Q ss_pred HHHHhhhhhhcccc-----ceeeEEEecccCCcccccccChHHHHHHHHHHhhhhhhhhHhhhccccceee---Eeeccc
Q psy4650 262 RAAAETCMHVLSTL-----QSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPCMHVLSTLQSSNV---FVESLY 333 (381)
Q Consensus 262 ~~~~e~ak~~lS~~-----~~~~i~~~~l~~g~~~~~~itr~~fe~l~~~l~~~~~~~~~~~Ls~~~~~~~---~~~~~~ 333 (381)
...+|+.|+.++.. .+..+.++... ......++|++|++++.+.++++.+.+++.|.......- .-..+.
T Consensus 253 ~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~--~~~~~~is~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~ 330 (419)
T 4a2a_A 253 FEESERLIITHGNAVYNDLKEEEIQYRGLD--GNTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPG 330 (419)
T ss_dssp HHHHHHHHHHHCCSCCTTCCCCEEEEECTT--SCSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TT
T ss_pred HHHHHHHHHHhccCcccCCCCceEEEeecC--CccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCC
Confidence 46788888887642 45567777653 246678999999999999999999999999987543100 123356
Q ss_pred cCcceEEeecHHHHHHHHHHHHHH
Q psy4650 334 DGLDFHHNVSRARFESLIGGLLTS 357 (381)
Q Consensus 334 ~~~~~~~~~~~~~~e~~~~~~~~~ 357 (381)
+.++.||+.+.|.+++++++.|+.
T Consensus 331 ~IvLtGG~s~lpgl~e~~~~~~g~ 354 (419)
T 4a2a_A 331 GVVLTGGGAKIPRINELATEVFKS 354 (419)
T ss_dssp CEEEESGGGGSTTHHHHHHHHHTS
T ss_pred EEEEECchhchhhHHHHHHHHHCC
Confidence 678899999999999999999974
No 302
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.59 E-value=1 Score=41.57 Aligned_cols=150 Identities=12% Similarity=0.104 Sum_probs=84.7
Q ss_pred cceeeeecC-CCceEEEEEecCCeEEEecCCCccceeeEeecc----ccccEEEEEe-------eeCCCccEEEEEcCCC
Q psy4650 35 TKVDITTNK-DMIEYKISYQESSRVKAFNPIQVATLILKTLYG----HEKGVNCVDY-------YHGGDKPYLISGADDR 102 (381)
Q Consensus 35 ~~~~i~~~~-~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~----h~~~v~~~~~-------~~~~~~~~l~s~~~d~ 102 (381)
.|.-+..+| +...+.++....+.|++.|+... .+..+-. .......++| ++++. .|..+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~---~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~--~lyvad~~~ 214 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR---MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAE--YMIVAIDYD 214 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTT---EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTC--EEEEEECCC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCC---EEEEEEccCccccCCCcEEEEeecccccCCCCC--EEEEEeCCC
Confidence 355666776 34555555555567888888642 2233221 2235889999 99876 344443332
Q ss_pred -------eEEEEECCC-CeEE-----EEeccCCCCEEEEEEecCCC-EEEEEeCCCCEEEEeCC-------CCee-----
Q psy4650 103 -------LVKIWDYQN-KTCV-----QTLEGHGQNISAVCFHPELP-IVITGSEDGSVRVWHSG-------THRL----- 156 (381)
Q Consensus 103 -------~v~vwd~~~-~~~~-----~~~~~~~~~v~~~~~~p~~~-~l~s~~~d~~i~vwd~~-------~~~~----- 156 (381)
.|.+.+... +... ..+... .....++.+|++. ++++-..++.|..+|+. ++..
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~ 293 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIV 293 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBG
T ss_pred CCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccc
Confidence 255555333 1211 122211 1236778899554 55555668889999987 5543
Q ss_pred ------eEE-Ee-cCCcceEEEEEcCCCCEEEEE-eCCCeEEE
Q psy4650 157 ------EIS-LT-YGLERVWTISSLKGSNNVAIG-YDEGSVLL 190 (381)
Q Consensus 157 ------~~~-~~-~~~~~v~~v~~~~~~~~l~~~-~~dg~v~i 190 (381)
... +. ........++|+|+|+.|..+ +....|+.
T Consensus 294 ~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~k 336 (496)
T 3kya_A 294 KNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMR 336 (496)
T ss_dssp GGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred cccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEE
Confidence 112 11 123456789999999854444 45566665
No 303
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.54 E-value=2.1 Score=42.24 Aligned_cols=124 Identities=10% Similarity=-0.009 Sum_probs=75.0
Q ss_pred CeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCC----eEEEEeccCCCCEEEEEEe
Q psy4650 56 SRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK----TCVQTLEGHGQNISAVCFH 131 (381)
Q Consensus 56 ~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~----~~~~~~~~~~~~v~~~~~~ 131 (381)
..|+..++.... ...+......+..++|.+.... ++++-...+.|+.+++... .....+...-.....|++.
T Consensus 404 ~~Ir~i~l~~~~---~~~l~~~~~~~~gl~~d~~~~~-lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 404 HEVRKMTLDRSE---YTSLIPNLRNVVALDTEVASNR-IYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 479 (791)
T ss_dssp SSEEEECTTSCC---CEEEECSCSSEEEEEEETTTTE-EEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred cceeEeeccCCc---ceeeecCCCceEEEeecccCCe-eEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence 467777764321 2223334567789999875542 5566667788988888753 2233333233455789999
Q ss_pred cCCCEEE-EEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEe
Q psy4650 132 PELPIVI-TGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGY 183 (381)
Q Consensus 132 p~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~ 183 (381)
+.+..|. +-...+.|.+.++.+......+...-.....|+++|.+..|....
T Consensus 480 ~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD 532 (791)
T 3m0c_C 480 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD 532 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred ecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEec
Confidence 8776554 445578999999976554333433445678899998755444443
No 304
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.25 E-value=0.054 Score=52.84 Aligned_cols=154 Identities=8% Similarity=-0.094 Sum_probs=76.7
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCcc--ceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVA--TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~--~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
+..+...+....+.++-...+.|+.+++.... ......+.........+++.+.+.. ++++-...+.|.+.+.....
T Consensus 408 p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~-LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN-IYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSB-CEECCTTTSCEEEEBSSSCC
T ss_pred eEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCc-EEEEeccCCeEEEEecCCCc
Confidence 34444444334444444445667777664200 0111111111223456777654442 45555667889999987654
Q ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeC--CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEE-EEEeCCCeEEE
Q psy4650 114 CVQTLEGHGQNISAVCFHPELPIVITGSE--DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNV-AIGYDEGSVLL 190 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l-~~~~~dg~v~i 190 (381)
....+.........++++|.+..|+.+.. .+.|..+++............-.....++++|++..| ++-...+.|..
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~ 566 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 566 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEE
Confidence 43333322234578889987664444332 2678777775432222112222345568888764433 33333444544
No 305
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.19 E-value=1.5 Score=38.42 Aligned_cols=136 Identities=7% Similarity=0.032 Sum_probs=83.9
Q ss_pred CCeEEEecCCCccceeeEeecc------cc-ccEEEEEe--eeCCCccEEEEEcCCCeEEEEECC-------CCeEEEEe
Q psy4650 55 SSRVKAFNPIQVATLILKTLYG------HE-KGVNCVDY--YHGGDKPYLISGADDRLVKIWDYQ-------NKTCVQTL 118 (381)
Q Consensus 55 d~~v~i~~~~~~~~~~~~~l~~------h~-~~v~~~~~--~~~~~~~~l~s~~~d~~v~vwd~~-------~~~~~~~~ 118 (381)
++++.+|++.. ....+..+.. .. ..+..+++ +|...+.++.....+|.+..|++. +.+.++.+
T Consensus 98 ~n~l~vf~iDp-~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDG-KNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECT-TTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECC-CCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 57999995421 1122444421 11 45666666 554443367777888999999883 23556777
Q ss_pred ccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCC-----CCeeeEEEec--CCcceEEEEE--cCCCC-EEEEEe-CCCe
Q psy4650 119 EGHGQNISAVCFHPELPIVITGSEDGSVRVWHSG-----THRLEISLTY--GLERVWTISS--LKGSN-NVAIGY-DEGS 187 (381)
Q Consensus 119 ~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~-----~~~~~~~~~~--~~~~v~~v~~--~~~~~-~l~~~~-~dg~ 187 (381)
.. .+.+..+...+....|..+-++.-|..+|.+ +++.+..+.. -...+..++. .++++ +|++++ .++.
T Consensus 177 ~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 177 KM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp EC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred cC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 64 3567888889988899999998777777755 3444444321 1235777776 45555 454444 6778
Q ss_pred EEEEe
Q psy4650 188 VLLKV 192 (381)
Q Consensus 188 v~i~~ 192 (381)
+.++.
T Consensus 256 ~~Vyd 260 (355)
T 3amr_A 256 YAIYD 260 (355)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88843
No 306
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.97 E-value=1.6 Score=37.73 Aligned_cols=116 Identities=4% Similarity=-0.083 Sum_probs=68.1
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEE-cCCCeEEEEECCCCeE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISG-ADDRLVKIWDYQNKTC 114 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~-~~d~~v~vwd~~~~~~ 114 (381)
+..+........+.++-...+.|.++++.......+ +.........+++.|.+.. ++.+- +..+.|...+......
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l--~~~~~~~P~giavdp~~g~-ly~td~~~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVL--FWQELDQPRAIALDPSSGF-MYWTDWGEVPKIERAGMDGSSR 157 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--ECSSCSSEEEEEEEGGGTE-EEEEECSSSCEEEEEETTSCSC
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEE--EeCCCCCccEEEEeCCCCE-EEEEecCCCCEEEEEEcCCCCe
Confidence 344555544455555656667888888753222211 2233456788999886542 33333 2357888888764332
Q ss_pred EEEeccCCCCEEEEEEecCCCEEEEE-eCCCCEEEEeCCCC
Q psy4650 115 VQTLEGHGQNISAVCFHPELPIVITG-SEDGSVRVWHSGTH 154 (381)
Q Consensus 115 ~~~~~~~~~~v~~~~~~p~~~~l~s~-~~d~~i~vwd~~~~ 154 (381)
...+...-..-..++++|++..|..+ ...+.|..+|+...
T Consensus 158 ~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 158 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence 22222223345899999977766555 44678999998753
No 307
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.65 E-value=0.44 Score=46.00 Aligned_cols=146 Identities=10% Similarity=0.084 Sum_probs=79.7
Q ss_pred eEEEecCCCccceeeEeecc-ccccEEEEEeeeCCCccEEEEEc-CCCeEEEEECCCCeEEEEeccCCC-CEEEEEEecC
Q psy4650 57 RVKAFNPIQVATLILKTLYG-HEKGVNCVDYYHGGDKPYLISGA-DDRLVKIWDYQNKTCVQTLEGHGQ-NISAVCFHPE 133 (381)
Q Consensus 57 ~v~i~~~~~~~~~~~~~l~~-h~~~v~~~~~~~~~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~-~v~~~~~~p~ 133 (381)
.+.+||+....-..+..+.. +.....++++.+++. +++.|+ .+..+.+||..+..-...-.-+.. .-.++...++
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~--lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~d 297 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQ--IVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSD 297 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSC--EEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTT
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCC--EEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecC
Confidence 57899987644333333322 333344566666665 677777 456899999987753322111111 1144556678
Q ss_pred CCEEEEEe-CC-----CCEEEEeCCCCeeeEEE-----ecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEe
Q psy4650 134 LPIVITGS-ED-----GSVRVWHSGTHRLEISL-----TYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMD 202 (381)
Q Consensus 134 ~~~l~s~~-~d-----~~i~vwd~~~~~~~~~~-----~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d 202 (381)
++.++.|| .+ ..+.+||..+.+....- ...... ....+..++...+.|+.+|.+.. .+....+..||
T Consensus 298 g~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~-~~~~~~~~~~iyv~Gg~~g~~~~-~~~~~~v~~yd 375 (656)
T 1k3i_A 298 GRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD-KQGLYRSDNHAWLFGWKKGSVFQ-AGPSTAMNWYY 375 (656)
T ss_dssp SCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC-TTGGGTTTCSCCEEECGGGCEEE-CCSSSEEEEEE
T ss_pred CeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc-ccceeecCCceEEEECCCCcEEE-ecCccceeeee
Confidence 99888888 34 57999999887644320 000000 00122345666666766666543 22233444566
Q ss_pred cCCC
Q psy4650 203 VNGC 206 (381)
Q Consensus 203 ~~~~ 206 (381)
..+.
T Consensus 376 ~~~~ 379 (656)
T 1k3i_A 376 TSGS 379 (656)
T ss_dssp CSTT
T ss_pred cCCc
Confidence 6544
No 308
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.43 E-value=2.1 Score=36.57 Aligned_cols=150 Identities=9% Similarity=-0.078 Sum_probs=75.9
Q ss_pred cceeeeecCCCceEEEEEecCC-eEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe
Q psy4650 35 TKVDITTNKDMIEYKISYQESS-RVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~-~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 113 (381)
.+..+...+++.-|++..+.++ .+..+++.......+..+. .......++..+++. .+++...++.|..+|..++.
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~-~~~~~~g~~~~~~~~--~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLP-DAIFLNGITPLSDTQ--YLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECT-TCSCEEEEEESSSSE--EEEEETTTTEEEEEETTTTE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCC-CccccCcccccCCCc--EEEEECCCCeEEEEeCCCCc
Confidence 4666777776554443333333 4666665432222222221 122334444444332 45565668899888987653
Q ss_pred E-EEEec---------cCCCCEEEEEEecCCCEEEEE-eCCCCEEEEeCCC-Cee--eEEEecCCcceEEEEEcCCCCEE
Q psy4650 114 C-VQTLE---------GHGQNISAVCFHPELPIVITG-SEDGSVRVWHSGT-HRL--EISLTYGLERVWTISSLKGSNNV 179 (381)
Q Consensus 114 ~-~~~~~---------~~~~~v~~~~~~p~~~~l~s~-~~d~~i~vwd~~~-~~~--~~~~~~~~~~v~~v~~~~~~~~l 179 (381)
. +.... +.-.....+ +|++..+..+ ...+.|..+|+.. +.. ...+.. ......++++++|++.
T Consensus 150 ~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~ 226 (306)
T 2p4o_A 150 GSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLY 226 (306)
T ss_dssp EEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEE
T ss_pred EeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEE
Confidence 1 21111 111233455 7888755544 4578899999874 332 111111 1233456667777655
Q ss_pred EEEeCCCeEEE
Q psy4650 180 AIGYDEGSVLL 190 (381)
Q Consensus 180 ~~~~~dg~v~i 190 (381)
++....+.|..
T Consensus 227 va~~~~~~V~~ 237 (306)
T 2p4o_A 227 GATHIYNSVVR 237 (306)
T ss_dssp EECBTTCCEEE
T ss_pred EEeCCCCeEEE
Confidence 55554555555
No 309
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.41 E-value=2.1 Score=36.53 Aligned_cols=108 Identities=13% Similarity=0.098 Sum_probs=64.7
Q ss_pred ccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCC-C-CEEEEeCCCCee
Q psy4650 79 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSED-G-SVRVWHSGTHRL 156 (381)
Q Consensus 79 ~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d-~-~i~vwd~~~~~~ 156 (381)
....+++|++++. ++++...++.|..||..... ...+. .......+++.+++.++++.... + .|..+|..+++.
T Consensus 32 ~~pegia~~~~g~--lyv~d~~~~~I~~~d~~g~~-~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 32 TFLENLASAPDGT--IFVTNHEVGEIVSITPDGNQ-QIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CCEEEEEECTTSC--EEEEETTTTEEEEECTTCCE-EEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECCCCC--EEEEeCCCCeEEEECCCCce-EEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 4577899988765 67777788999999987543 33332 23467899999999966655433 2 466677777765
Q ss_pred eEEEec-CCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 157 EISLTY-GLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 157 ~~~~~~-~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
...... .......++..+++..+++...+|.+..
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~ 142 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWL 142 (306)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEE
T ss_pred EEEEeCCCccccCcccccCCCcEEEEECCCCeEEE
Confidence 432221 1122334444444444444334555555
No 310
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.40 E-value=4.2 Score=39.97 Aligned_cols=144 Identities=10% Similarity=-0.038 Sum_probs=86.1
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEee----ccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCC
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTL----YGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 111 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l----~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~ 111 (381)
.+++...+++. +-.|..++.+..|++... ....+ ......|.++...+++. |..|..++-+..++..+
T Consensus 365 v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~---~~~~~~~~~~~~~~~v~~i~~d~~g~---lWigt~~~Gl~~~~~~~ 436 (781)
T 3v9f_A 365 VSSVCDDGQGK--LWIGTDGGGINVFENGKR---VAIYNKENRELLSNSVLCSLKDSEGN---LWFGTYLGNISYYNTRL 436 (781)
T ss_dssp EEEEEECTTSC--EEEEEBSSCEEEEETTEE---EEECC-----CCCSBEEEEEECTTSC---EEEEETTEEEEEECSSS
T ss_pred eEEEEEcCCCC--EEEEeCCCcEEEEECCCC---eEEEccCCCCCCCcceEEEEECCCCC---EEEEeccCCEEEEcCCC
Confidence 34555554433 333444556888887531 11111 12346788888766554 55567667788888877
Q ss_pred CeEEEEec--cCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecC-----CcceEEEEEcCCCCEEEEEeC
Q psy4650 112 KTCVQTLE--GHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYG-----LERVWTISSLKGSNNVAIGYD 184 (381)
Q Consensus 112 ~~~~~~~~--~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-----~~~v~~v~~~~~~~~l~~~~~ 184 (381)
++...... .....|.++...+++.+.+.. . +-+..||..+++........ ...|.++...++|.+.+....
T Consensus 437 ~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~ 514 (781)
T 3v9f_A 437 KKFQIIELEKNELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG 514 (781)
T ss_dssp CEEEECCSTTTCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS
T ss_pred CcEEEeccCCCCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC
Confidence 76433221 134578898888777655544 4 45888998877654333222 357889998888876554444
Q ss_pred CCeEE
Q psy4650 185 EGSVL 189 (381)
Q Consensus 185 dg~v~ 189 (381)
.|..+
T Consensus 515 ~Gl~~ 519 (781)
T 3v9f_A 515 GGVGI 519 (781)
T ss_dssp SCEEE
T ss_pred CCEEE
Confidence 56444
No 311
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.12 E-value=4.9 Score=39.61 Aligned_cols=145 Identities=11% Similarity=0.024 Sum_probs=89.2
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeec-c--------ccccEEEEEeeeCCCccEEEEEcCCCeEEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLY-G--------HEKGVNCVDYYHGGDKPYLISGADDRLVKI 106 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~-~--------h~~~v~~~~~~~~~~~~~l~s~~~d~~v~v 106 (381)
..++..++++. +-.|..++.+..|++.... ...+. . ....|.++...+++. .|..|..++-+..
T Consensus 359 V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~~~---~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~--~lWigt~~~Gl~~ 431 (795)
T 4a2l_A 359 VSCIVEDKDKN--LWIGTNDGGLNLYNPITQR---FTSYTLQEDESARGIGSNNIKAVYVDEKKS--LVYIGTHAGGLSI 431 (795)
T ss_dssp EEEEEECTTSC--EEEEESSSCEEEECTTTCC---EEEECCC------CCSCSCEEEEEEETTTT--EEEEEETTTEEEE
T ss_pred eEEEEECCCCC--EEEEECCCCeEEEcCCCCc---EEEEecCCCCcccCCCCccEEEEEEcCCCC--EEEEEeCcCceeE
Confidence 34555555433 3345666678889875321 12221 1 135688888766543 3667777777999
Q ss_pred EECCCCeEEEEec----cCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEec------CCcceEEEEEcCCC
Q psy4650 107 WDYQNKTCVQTLE----GHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTY------GLERVWTISSLKGS 176 (381)
Q Consensus 107 wd~~~~~~~~~~~----~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~------~~~~v~~v~~~~~~ 176 (381)
+|..++....... .+...|.++...++|.+++... + -+.+||..+++....... ....|.++...++|
T Consensus 432 ~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g 509 (795)
T 4a2l_A 432 LHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHK 509 (795)
T ss_dssp EETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTC
T ss_pred EeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCC
Confidence 9988876433221 1345789998888887666554 4 488899887765332211 23568899888888
Q ss_pred CEEEEEeCCCeEEE
Q psy4650 177 NNVAIGYDEGSVLL 190 (381)
Q Consensus 177 ~~l~~~~~dg~v~i 190 (381)
...+... .|..++
T Consensus 510 ~lWigt~-~Gl~~~ 522 (795)
T 4a2l_A 510 RLWIGGE-EGLSVF 522 (795)
T ss_dssp CEEEEES-SCEEEE
T ss_pred CEEEEeC-CceEEE
Confidence 7655444 564443
No 312
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=93.99 E-value=0.058 Score=47.60 Aligned_cols=63 Identities=10% Similarity=0.150 Sum_probs=47.6
Q ss_pred hhhhhhHhhhccccc------eeeEee--ccccCcceEEeecHHHHHHHHHHHHHHhHHHHHHHHHhCCCC
Q psy4650 310 SFVQPCMHVLSTLQS------SNVFVE--SLYDGLDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNIT 372 (381)
Q Consensus 310 ~~~~~~~~~Ls~~~~------~~~~~~--~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~ 372 (381)
..++.+|+.|+.... ..+.++ ++.++..+...++|++|++++++++.++.+.++++|++++.+
T Consensus 201 ~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~ 271 (344)
T 1jce_A 201 RTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPE 271 (344)
T ss_dssp HHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Confidence 346777877776432 234443 344566677899999999999999999999999999998743
No 313
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.87 E-value=0.34 Score=47.24 Aligned_cols=115 Identities=8% Similarity=-0.134 Sum_probs=61.8
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEee-ccccccEEEEEeeeCCCccEEEEEcC-CCeEEEEECCCCe
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTL-YGHEKGVNCVDYYHGGDKPYLISGAD-DRLVKIWDYQNKT 113 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l-~~h~~~v~~~~~~~~~~~~~l~s~~~-d~~v~vwd~~~~~ 113 (381)
|..+........+.++-...+.|.++++... ....+ .........+++.|.+.. ++++-.. .+.|..+++....
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~---~~~~l~~~~~~~P~giavDp~~g~-ly~td~~~~~~I~~~~~dG~~ 530 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFREQGSKPRAIVVDPVHGF-MYWTDWGTPAKIKKGGLNGVD 530 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSC---CEEEECCCSSCCCCCEECCSSSSC-CEECCCSSSCCEEBCCSSSCC
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCC---ceEEEEeCCCCCcceEEEccCCCc-EEEcccCCCCeEEEEeCCCCC
Confidence 3344444333444455555678888887532 12222 222234567788875542 3333322 3677777665432
Q ss_pred EEEEeccCCCCEEEEEEecCCCEEE-EEeCCCCEEEEeCCCC
Q psy4650 114 CVQTLEGHGQNISAVCFHPELPIVI-TGSEDGSVRVWHSGTH 154 (381)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~p~~~~l~-s~~~d~~i~vwd~~~~ 154 (381)
....+...-.....|+|+|++..|. +-...+.|..+|+.+.
T Consensus 531 ~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 531 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 2222222223447899999766444 4445678999998653
No 314
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.79 E-value=4.1 Score=40.03 Aligned_cols=143 Identities=10% Similarity=0.014 Sum_probs=83.0
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeec---cccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCC
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLY---GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK 112 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~---~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~ 112 (381)
.+++....++. +..|..++.+..|++... ....+. -....|.++...+++. |..|.. +-+..+|..++
T Consensus 409 v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~---~~~~~~~~~~~~~~v~~i~~d~~g~---lwigt~-~Gl~~~~~~~~ 479 (781)
T 3v9f_A 409 VLCSLKDSEGN--LWFGTYLGNISYYNTRLK---KFQIIELEKNELLDVRVFYEDKNKK---IWIGTH-AGVFVIDLASK 479 (781)
T ss_dssp EEEEEECTTSC--EEEEETTEEEEEECSSSC---EEEECCSTTTCCCCEEEEEECTTSE---EEEEET-TEEEEEESSSS
T ss_pred eEEEEECCCCC--EEEEeccCCEEEEcCCCC---cEEEeccCCCCCCeEEEEEECCCCC---EEEEEC-CceEEEeCCCC
Confidence 34555554433 333555567888887532 122222 1346788887765543 444555 55788898776
Q ss_pred eEEEEeccC-----CCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEec----CCcceEEEEEcCCCCEEEEEe
Q psy4650 113 TCVQTLEGH-----GQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTY----GLERVWTISSLKGSNNVAIGY 183 (381)
Q Consensus 113 ~~~~~~~~~-----~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~----~~~~v~~v~~~~~~~~l~~~~ 183 (381)
......... ...|.++...++|.+.+.....| +..||..+++... +.. ....|.++...++|.+.++ +
T Consensus 480 ~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~-~~~~~~l~~~~i~~i~~d~~g~lWi~-T 556 (781)
T 3v9f_A 480 KVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRK-FNQYEGFCSNTINQIYRSSKGQMWLA-T 556 (781)
T ss_dssp SCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEE-ECTTTTCSCSCEEEEEECTTSCEEEE-E
T ss_pred eEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEE-ccCCCCCCCCeeEEEEECCCCCEEEE-E
Confidence 543322211 35789998888888666543344 7778887765432 321 2346888888888875444 3
Q ss_pred CCCeEEE
Q psy4650 184 DEGSVLL 190 (381)
Q Consensus 184 ~dg~v~i 190 (381)
.+|.+..
T Consensus 557 ~~Glv~~ 563 (781)
T 3v9f_A 557 GEGLVCF 563 (781)
T ss_dssp TTEEEEE
T ss_pred CCCceEE
Confidence 3565344
No 315
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=93.63 E-value=0.026 Score=50.58 Aligned_cols=93 Identities=18% Similarity=0.032 Sum_probs=54.5
Q ss_pred HHHhhhhhhccccceeeEEEecccCCcccccccChHHHHHHHHHHhhhhhhhhHhhhccccceeeEeeccccCcceEEee
Q psy4650 263 AAAETCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPCMHVLSTLQSSNVFVESLYDGLDFHHNV 342 (381)
Q Consensus 263 ~~~e~ak~~lS~~~~~~i~~~~l~~g~~~~~~itr~~fe~l~~~l~~~~~~~~~~~Ls~~~~~~~~~~~~~~~~~~~~~~ 342 (381)
..+|++|+.++............++.......++|++|++++.+.+.++.+.+++.|.... +...-..+...++.||..
T Consensus 239 ~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~-~~~~~~~~~~IvL~GG~s 317 (377)
T 2ych_A 239 LAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFR-IQLEEASPEVGYLLGGGS 317 (377)
T ss_dssp HHHHHHHHHTC-------------------------CHHHHHHHHHHHHHHHHHHHHHHHH-HHC---CCSEEEEESGGG
T ss_pred HHHHHHHhhcccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCCCcCEEEEECccc
Confidence 4678888877754322111111111111345789999999999999999999999997532 122333456778889999
Q ss_pred cHHHHHHHHHHHHH
Q psy4650 343 SRARFESLIGGLLT 356 (381)
Q Consensus 343 ~~~~~e~~~~~~~~ 356 (381)
..|.+.+++++.|+
T Consensus 318 ~~p~l~~~l~~~l~ 331 (377)
T 2ych_A 318 KLRGLASLLTDTLG 331 (377)
T ss_dssp GSTTHHHHHHHHHT
T ss_pred cchhHHHHHHHHhC
Confidence 99999999999997
No 316
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.58 E-value=3.3 Score=35.86 Aligned_cols=132 Identities=9% Similarity=0.080 Sum_probs=78.7
Q ss_pred CeEEEecCCCccceeeEeeccccccEEEEEeeeCCCc-cEEEEEcC---CCeEEEEECCCC---e------EEEEecc--
Q psy4650 56 SRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDK-PYLISGAD---DRLVKIWDYQNK---T------CVQTLEG-- 120 (381)
Q Consensus 56 ~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~-~~l~s~~~---d~~v~vwd~~~~---~------~~~~~~~-- 120 (381)
|.+.+|..+ ....+.+.||.+....+...-+... .+++-+.. .+.+++-++... . ....+..
T Consensus 180 G~mQLYS~e---r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppe 256 (365)
T 2xzh_A 180 GAMQLYSVD---RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE 256 (365)
T ss_dssp EEEEEEETT---TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTT
T ss_pred eeEEEEeec---ccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCcc
Confidence 678888875 4455677888766555443211111 13333322 258888887432 1 1111111
Q ss_pred -CCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 121 -HGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 121 -~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
..+--.++..++.-..+..-..-|.+.+||+.+|.++..-+-..+.|...+.+....-+.+-...|.|.-
T Consensus 257 a~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~ 327 (365)
T 2xzh_A 257 AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLS 327 (365)
T ss_dssp CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEE
T ss_pred ccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEE
Confidence 1334567888887777888888999999999999999887766666665555444333333334554443
No 317
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.46 E-value=5.5 Score=38.02 Aligned_cols=146 Identities=5% Similarity=-0.109 Sum_probs=84.7
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 114 (381)
.+..+........+.++-...+.|..+++.... .....+..-......+++.+.+.. ++.+-...+.|.+.+......
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~-~~~~v~~~~~~~P~GlAvD~~~~~-ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE-SVQNVVVSGLLSPDGLACDWLGEK-LYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC------CEEEECSSCSCEEEEEEETTTTE-EEEEETTTTEEEEEETTSCSC
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCC-ceEEEEeCCCCCcCeEEEEecCCE-EEEEeCCCCEEEEEECCCCCE
Confidence 356666666555556666666788888775321 111222222356788999875552 566667789999999876543
Q ss_pred EEEeccCCCCEEEEEEecCCCEEEEEeC--CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEE
Q psy4650 115 VQTLEGHGQNISAVCFHPELPIVITGSE--DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIG 182 (381)
Q Consensus 115 ~~~~~~~~~~v~~~~~~p~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~ 182 (381)
...+...-.....+++.|.+..|..+.. .+.|...++.+..........-.....+++++.+..|..+
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~a 188 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWA 188 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEE
Confidence 3333233344588999997665555543 3566666665433322222233456778888765544433
No 318
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=93.38 E-value=0.74 Score=44.41 Aligned_cols=121 Identities=15% Similarity=0.178 Sum_probs=68.7
Q ss_pred EEEeee-CCCccEEEEEcCCC-----------eEEEEECCCCeE--EEEecc-CCCCEEEEEEecCCCEEEEEeC-CCCE
Q psy4650 83 CVDYYH-GGDKPYLISGADDR-----------LVKIWDYQNKTC--VQTLEG-HGQNISAVCFHPELPIVITGSE-DGSV 146 (381)
Q Consensus 83 ~~~~~~-~~~~~~l~s~~~d~-----------~v~vwd~~~~~~--~~~~~~-~~~~v~~~~~~p~~~~l~s~~~-d~~i 146 (381)
.+++.| ++. .++.|+.+. .+.+||..++.- +..+.. +.....++++.+++..++.||. +..+
T Consensus 190 ~~av~~~~g~--l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGR--VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTE--EEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred eEEEEecCCE--EEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCce
Confidence 445555 333 666665432 578899887752 222222 2223345677889998888884 5689
Q ss_pred EEEeCCCCeeeEEEecCCcce-EEEEEcCCCCEEEEEe-CCCeEEEEecCCCceEEEecCCCEEEEEe
Q psy4650 147 RVWHSGTHRLEISLTYGLERV-WTISSLKGSNNVAIGY-DEGSVLLKVGREEPAVSMDVNGCKIIWAR 212 (381)
Q Consensus 147 ~vwd~~~~~~~~~~~~~~~~v-~~v~~~~~~~~l~~~~-~dg~v~i~~~~~~~~~~~d~~~~~~~~~~ 212 (381)
.+||..+.+....-.....+. .+++..++|++++.|+ .++.- ....+..||+.++. |..
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~-----~~~~~e~yd~~t~~--W~~ 328 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGV-----FEKNGEVYSPSSKT--WTS 328 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSS-----CCCCEEEEETTTTE--EEE
T ss_pred EEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCc-----ccccceEeCCCCCc--cee
Confidence 999998776443221111111 2344556777777776 33211 11334458887765 554
No 319
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=91.96 E-value=6.9 Score=35.39 Aligned_cols=133 Identities=9% Similarity=0.082 Sum_probs=82.6
Q ss_pred CCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCc-cEEEEEcC---CCeEEEEECCCC---e------EEEEec--
Q psy4650 55 SSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDK-PYLISGAD---DRLVKIWDYQNK---T------CVQTLE-- 119 (381)
Q Consensus 55 d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~-~~l~s~~~---d~~v~vwd~~~~---~------~~~~~~-- 119 (381)
.|.+.+|..+ ....+.+.||.+....+...-+... .+++-+.. .+.+++.++... . ....+.
T Consensus 178 ~G~mQLYS~e---r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fpp 254 (494)
T 1bpo_A 178 VGAMQLYSVD---RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP 254 (494)
T ss_dssp EEEEEEEEST---TCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCT
T ss_pred cceEEEeecc---ccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCc
Confidence 3678888875 4455677899777665554321111 13443433 278888887432 1 111111
Q ss_pred -cCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 120 -GHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 120 -~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
...+--.++..++.-..+..-..-|.+.++|+.+|.++..-+-..+.|...+.+....-+.+-...|.|.-
T Consensus 255 e~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~ 326 (494)
T 1bpo_A 255 EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLS 326 (494)
T ss_dssp TSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEE
T ss_pred ccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEE
Confidence 11234567888888888888888999999999999999887766677666555554444444445555544
No 320
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=91.81 E-value=6.2 Score=34.52 Aligned_cols=100 Identities=13% Similarity=0.101 Sum_probs=57.9
Q ss_pred cccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE--EEEec---cCCCCEEEEEEecC---CCEEEEE-eCC-----
Q psy4650 78 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC--VQTLE---GHGQNISAVCFHPE---LPIVITG-SED----- 143 (381)
Q Consensus 78 ~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~--~~~~~---~~~~~v~~~~~~p~---~~~l~s~-~~d----- 143 (381)
-..-..++|.|++. ++++ ..++.|.+++ .+.. +..+. ........++++|+ +..|..+ ...
T Consensus 30 l~~P~~ia~~pdG~--l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 30 LEVPWALAFLPDGG--MLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp CSCEEEEEECTTSC--EEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CCCceEEEEcCCCe--EEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 34567899999886 4444 5569999988 4432 22221 12346789999998 4444333 222
Q ss_pred CCEEEEeCCCCee-----eE-EEe---cCCcceEEEEEcCCCCEEEEE
Q psy4650 144 GSVRVWHSGTHRL-----EI-SLT---YGLERVWTISSLKGSNNVAIG 182 (381)
Q Consensus 144 ~~i~vwd~~~~~~-----~~-~~~---~~~~~v~~v~~~~~~~~l~~~ 182 (381)
+.|..|+...+.. +. .+. ........++|.|+|.+.++.
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 5677888765421 11 132 111233578888888655553
No 321
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.70 E-value=1.2 Score=38.93 Aligned_cols=111 Identities=14% Similarity=0.044 Sum_probs=69.7
Q ss_pred EEEEEcCCCeEEEEECCCCeEEEEeccC-CCCEEEEEEe--cCCCEEEEE--eCCCCEEEEeCCCCeeeEEEecC----C
Q psy4650 94 YLISGADDRLVKIWDYQNKTCVQTLEGH-GQNISAVCFH--PELPIVITG--SEDGSVRVWHSGTHRLEISLTYG----L 164 (381)
Q Consensus 94 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~-~~~v~~~~~~--p~~~~l~s~--~~d~~i~vwd~~~~~~~~~~~~~----~ 164 (381)
.++.++.||.|.-.|..+|+.+..++.. ..++....-. +.+..+..+ ..||.+.-+|..+|.....+... .
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 6888999999999999999999988754 1222221100 112233333 57999999999888665544321 1
Q ss_pred cceEEEE----E-c----CCCCEEEEEeCCCeEEEEecCCCceEEEecCCCEEEEEecCc
Q psy4650 165 ERVWTIS----S-L----KGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSE 215 (381)
Q Consensus 165 ~~v~~v~----~-~----~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~~~~~~~~~~ 215 (381)
.++.. . . . ..+..+.+|+.+|.+.. .|..+|+.+|.....
T Consensus 92 SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~a----------ld~~tG~~~W~~~~~ 140 (339)
T 2be1_A 92 SPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYT----------INMLNGEIISAFGPG 140 (339)
T ss_dssp CSEEE-ECC----------CCEEEEECEEEEEEEE----------EETTTCCEEEEESTT
T ss_pred ccccc-CCCceeecccccccCCEEEEEecCCEEEE----------EECCCCcEEEEEecC
Confidence 11111 0 0 0 02345566666666666 999999999998654
No 322
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=91.09 E-value=11 Score=36.02 Aligned_cols=144 Identities=4% Similarity=-0.138 Sum_probs=86.2
Q ss_pred cceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE
Q psy4650 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114 (381)
Q Consensus 35 ~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 114 (381)
.+..+..++....+.++-..++.|..+++...... ..+.........+++.+.+.. +..+-...+.|.+.++.....
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~--~v~~~g~~~P~GlAvD~~~~~-LY~tD~~~~~I~v~~~dG~~~ 114 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALE--HVVEFGLDYPEGMAVDWLGKN-LYWADTGTNRIEVSKLDGQHR 114 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSCCCEEEEETTTTE-EEEEETTTTEEEEEETTSTTC
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE--EEEeCCCCCcceEEEEeCCCE-EEEEECCCCEEEEEecCCCcE
Confidence 45667777665666666667788888887532111 122222245667887765442 556667788999999876543
Q ss_pred EEEeccCCCCEEEEEEecCCCEEEEEeC--CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEE
Q psy4650 115 VQTLEGHGQNISAVCFHPELPIVITGSE--DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIG 182 (381)
Q Consensus 115 ~~~~~~~~~~v~~~~~~p~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~ 182 (381)
...+...-.....++++|....|....+ .+.|...++.+.... .+...-.....+++++.+..|..+
T Consensus 115 ~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l~~~~~~P~GlalD~~~~~LY~a 183 (628)
T 4a0p_A 115 QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TLVPNVGRANGLTIDYAKRRLYWT 183 (628)
T ss_dssp EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEECSCSSEEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EEECCCCCcceEEEccccCEEEEE
Confidence 3333233345689999997665555543 456777777654332 222234556778888765544443
No 323
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=90.80 E-value=0.53 Score=42.61 Aligned_cols=70 Identities=4% Similarity=0.013 Sum_probs=51.3
Q ss_pred hhhhhhhHhhhccc-----cceeeEeeccccCcceEEeecHHHHHHHHHHHHHHhHHHHHHHHHhCCCC------ccccc
Q psy4650 309 TSFVQPCMHVLSTL-----QSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNIT------HDQIN 377 (381)
Q Consensus 309 ~~~~~~~~~~Ls~~-----~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~------~~~i~ 377 (381)
...+|.+|+.+..+ ....++++.+.+ .....+++..|++++++.++++++.++++|++++++ ...++
T Consensus 253 ~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~--~~~~~is~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~ 330 (419)
T 4a2a_A 253 FEESERLIITHGNAVYNDLKEEEIQYRGLDG--NTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPG 330 (419)
T ss_dssp HHHHHHHHHHHCCSCCTTCCCCEEEEECTTS--CSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TT
T ss_pred HHHHHHHHHHhccCcccCCCCceEEEeecCC--ccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCC
Confidence 34677777776542 234566766543 355789999999999999999999999999999984 45566
Q ss_pred ccc
Q psy4650 378 KFT 380 (381)
Q Consensus 378 ~v~ 380 (381)
.|+
T Consensus 331 ~Iv 333 (419)
T 4a2a_A 331 GVV 333 (419)
T ss_dssp CEE
T ss_pred EEE
Confidence 664
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=90.66 E-value=2.4 Score=34.47 Aligned_cols=133 Identities=9% Similarity=-0.033 Sum_probs=73.8
Q ss_pred eEEEEEecCCeEEEecCCCcccee---eEeeccc--cccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE------E
Q psy4650 47 EYKISYQESSRVKAFNPIQVATLI---LKTLYGH--EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC------V 115 (381)
Q Consensus 47 ~~~~s~~~d~~v~i~~~~~~~~~~---~~~l~~h--~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~------~ 115 (381)
.+|+....| +++.=.+....... ..+..|+ =..+..++|+|++. |... .+|.+.-.+..+... -
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~---LYaV-~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGE---LYGV-LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSC---EEEE-ETTEEEEESCCCSTTCCHHHHC
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCcc---EEEE-eCCeEEEECCCCCCcccccccc
Confidence 356666666 65555543322111 1111233 24678999999776 4444 677665555433211 1
Q ss_pred EEec--cCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeee-----EEE--ecCCcceEEEEEcCCCCEEEEEeCCC
Q psy4650 116 QTLE--GHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLE-----ISL--TYGLERVWTISSLKGSNNVAIGYDEG 186 (381)
Q Consensus 116 ~~~~--~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~-----~~~--~~~~~~v~~v~~~~~~~~l~~~~~dg 186 (381)
..+- +-. .-.++.|.|+|.+.++ .||.|.-++-.+.... .+. .+.=..+..+.+.|+|.+.++. ||
T Consensus 80 t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg 154 (236)
T 1tl2_A 80 KKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQ 154 (236)
T ss_dssp EEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred cEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CC
Confidence 1111 111 1378899999987777 4688887776431110 011 1111357899999999988777 66
Q ss_pred eEE
Q psy4650 187 SVL 189 (381)
Q Consensus 187 ~v~ 189 (381)
.+.
T Consensus 155 ~ly 157 (236)
T 1tl2_A 155 QFY 157 (236)
T ss_dssp EEE
T ss_pred cEE
Confidence 653
No 325
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=90.65 E-value=6.4 Score=34.41 Aligned_cols=103 Identities=13% Similarity=0.036 Sum_probs=57.7
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeec---cccccEEEEEeeeC---CCccEEEEEcCC-----C
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLY---GHEKGVNCVDYYHG---GDKPYLISGADD-----R 102 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~---~h~~~v~~~~~~~~---~~~~~l~s~~~d-----~ 102 (381)
..|..+.+.+++. ++++ ...|.|++++ .. ....+..+. ........++++|+ +.. +.++-... .
T Consensus 31 ~~P~~ia~~pdG~-l~V~-e~~g~I~~i~-~g-~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~-lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 31 EVPWALAFLPDGG-MLIA-ERPGRIRLFR-EG-RLSTYAELSVYHRGESGLLGLALHPRFPQEPY-VYAYRTVAEGGLRN 105 (352)
T ss_dssp SCEEEEEECTTSC-EEEE-ETTTEEEEEE-TT-EEEEEEECCCCCSTTCSEEEEEECTTTTTSCE-EEEEEEECTTSSEE
T ss_pred CCceEEEEcCCCe-EEEE-eCCCeEEEEE-CC-CccEeecceEeecCCCCceeEEECCCCCCCCE-EEEEEecCCCCCcc
Confidence 3577888888754 4444 4558999988 22 222222222 22456889999997 332 33333322 5
Q ss_pred eEEEEECCCCe-----EE-EEec---cCCCCEEEEEEecCCCEEEEEe
Q psy4650 103 LVKIWDYQNKT-----CV-QTLE---GHGQNISAVCFHPELPIVITGS 141 (381)
Q Consensus 103 ~v~vwd~~~~~-----~~-~~~~---~~~~~v~~~~~~p~~~~l~s~~ 141 (381)
.|..++...+. .+ ..+. +.......++|.|+|.+.++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 67777776431 11 1132 1111236899999997665543
No 326
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=90.21 E-value=9 Score=33.60 Aligned_cols=135 Identities=11% Similarity=0.101 Sum_probs=76.9
Q ss_pred cCCeEEEecCCCc--cceeeEeecc-----ccccEEEEEeeeC--CCccEEEEEcC--CCeEEEEECCCC--e--EEEEe
Q psy4650 54 ESSRVKAFNPIQV--ATLILKTLYG-----HEKGVNCVDYYHG--GDKPYLISGAD--DRLVKIWDYQNK--T--CVQTL 118 (381)
Q Consensus 54 ~d~~v~i~~~~~~--~~~~~~~l~~-----h~~~v~~~~~~~~--~~~~~l~s~~~--d~~v~vwd~~~~--~--~~~~~ 118 (381)
.+|.|.++|+.+. ....+ .+.+ ..-....+.+.++ +...++++-.. +.++.+|++... . .+..+
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSEL-EIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCEEEC-EEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCceEEE-EccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 6889999998642 22222 2222 2346778888774 43334444333 578888877553 2 23344
Q ss_pred ccCC-CCEEEEEEecCCCEEEEEeC---C------------CCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEE
Q psy4650 119 EGHG-QNISAVCFHPELPIVITGSE---D------------GSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIG 182 (381)
Q Consensus 119 ~~~~-~~v~~~~~~p~~~~l~s~~~---d------------~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~ 182 (381)
.+.. ...+.+.+.++|...++... | ..-.+|.+..++.. .+...-...+.++|+|+++.+..+
T Consensus 160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~-~~~~~l~~pNGia~spDg~~lYva 238 (355)
T 3sre_A 160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVR-VVAEGFDFANGINISPDGKYVYIA 238 (355)
T ss_dssp CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCE-EEEEEESSEEEEEECTTSSEEEEE
T ss_pred ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEE-EeecCCcccCcceECCCCCEEEEE
Confidence 4322 35688999999987776531 1 22334444334322 222233456889999999877665
Q ss_pred e-CCCeEEE
Q psy4650 183 Y-DEGSVLL 190 (381)
Q Consensus 183 ~-~dg~v~i 190 (381)
. ..+.+..
T Consensus 239 dt~~~~I~~ 247 (355)
T 3sre_A 239 ELLAHKIHV 247 (355)
T ss_dssp EGGGTEEEE
T ss_pred eCCCCeEEE
Confidence 4 4556665
No 327
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.47 E-value=12 Score=34.03 Aligned_cols=107 Identities=11% Similarity=0.147 Sum_probs=58.1
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeecc------ccccEEEEEeeeC---CCccEEEEEcC----
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYG------HEKGVNCVDYYHG---GDKPYLISGAD---- 100 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~------h~~~v~~~~~~~~---~~~~~l~s~~~---- 100 (381)
..|..+.+.+++. ++++-...+.|++++........+..+.. ..+....++|+|+ +.. +.++-+.
T Consensus 27 ~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~-lYv~~s~~~~~ 104 (454)
T 1cru_A 27 NKPHALLWGPDNQ-IWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPY-IYISGTFKNPK 104 (454)
T ss_dssp SSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCE-EEEEEEEECTT
T ss_pred CCceEEEEcCCCc-EEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCE-EEEEEeccccC
Confidence 4677888888754 66654444578888764322333333321 2467789999985 332 3333221
Q ss_pred --------CCeEEEEECCCC-------eEEE-Eecc-CCCCEEEEEEecCCCEEEEEeC
Q psy4650 101 --------DRLVKIWDYQNK-------TCVQ-TLEG-HGQNISAVCFHPELPIVITGSE 142 (381)
Q Consensus 101 --------d~~v~vwd~~~~-------~~~~-~~~~-~~~~v~~~~~~p~~~~l~s~~~ 142 (381)
...|.-++...+ +.+. .+.. .......+.|.|+|.+.++.+.
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 124444444321 1111 1221 1124689999999996666543
No 328
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=89.20 E-value=8.3 Score=33.74 Aligned_cols=107 Identities=11% Similarity=0.028 Sum_probs=55.4
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEee----ccccccEEEEEeeeC---CCccEEEEEcC------
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTL----YGHEKGVNCVDYYHG---GDKPYLISGAD------ 100 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l----~~h~~~v~~~~~~~~---~~~~~l~s~~~------ 100 (381)
..|..+.+.+++..++++ ...|.|++++........+..+ ....+....++++|+ +.. +.++-+.
T Consensus 18 ~~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~-lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLIT-LRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRR-IWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECSTTCCEEEE-ETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCE-EEEEEEEECSSSC
T ss_pred CCcEEEEEcCCCCEEEEE-eCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCE-EEEEEeCCCCCCC
Confidence 467888888875424444 4578999998642111111111 122346789999985 332 3333222
Q ss_pred -CCeEEEEECCCC----eEEEE----ec---cCCCCEEEEEEecCCCEEEEEeC
Q psy4650 101 -DRLVKIWDYQNK----TCVQT----LE---GHGQNISAVCFHPELPIVITGSE 142 (381)
Q Consensus 101 -d~~v~vwd~~~~----~~~~~----~~---~~~~~v~~~~~~p~~~~l~s~~~ 142 (381)
...|..|+.... ..... +. .....-..+.|.|+|.+.++.+.
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 234555665432 11111 11 00112367999999975555443
No 329
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=88.70 E-value=11 Score=32.45 Aligned_cols=108 Identities=9% Similarity=0.092 Sum_probs=63.9
Q ss_pred cccccEEEEEeeeCCCccEEEEEcCCCeEEEEEC--CCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCC
Q psy4650 76 GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDY--QNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGT 153 (381)
Q Consensus 76 ~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~--~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~ 153 (381)
++...+.++.+.|++. +++.+...+..+-+|- .+-..+. ......+..+.+.|++..++ ++.+|.+.+++...
T Consensus 160 ~~~~~~~~~~~~~~~~--~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~ 234 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGE--YVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDN 234 (327)
T ss_dssp SCCCCEEEEEECTTSC--EEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTE
T ss_pred CCCcceEEEEEcCCCc--EEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCC
Confidence 4556788999988655 5665544444444442 2222221 23456788999999887654 45577777775333
Q ss_pred CeeeEEEec----CCcceEEEEEcCCCCEEEEEeCCCeEE
Q psy4650 154 HRLEISLTY----GLERVWTISSLKGSNNVAIGYDEGSVL 189 (381)
Q Consensus 154 ~~~~~~~~~----~~~~v~~v~~~~~~~~l~~~~~dg~v~ 189 (381)
|..-..+.. ....+.++.+.+++..++++. +|.+.
T Consensus 235 G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~ 273 (327)
T 2xbg_A 235 SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALL 273 (327)
T ss_dssp EEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEE
T ss_pred CCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEE
Confidence 433222221 123578899998877766654 56554
No 330
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=88.70 E-value=11 Score=32.91 Aligned_cols=101 Identities=12% Similarity=-0.008 Sum_probs=57.8
Q ss_pred cccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe-EEEEec---cCCCCEEEEEEecC---CCEEE-EEeC---C---
Q psy4650 78 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT-CVQTLE---GHGQNISAVCFHPE---LPIVI-TGSE---D--- 143 (381)
Q Consensus 78 ~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~-~~~~~~---~~~~~v~~~~~~p~---~~~l~-s~~~---d--- 143 (381)
-....+++|.|++. ++ .+..++.|++++ ..+. .+..+. ........++++|+ +..|. +-.. +
T Consensus 28 l~~P~~ia~~pdG~--l~-V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR--YL-VTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp CSCEEEEEEEETTE--EE-EEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCCeEEEEcCCCe--EE-EEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 34568899999875 44 445569999887 3454 222221 12346789999997 44443 3321 3
Q ss_pred -CCEEEEeCCCC--e-----ee-EEEec-CCcceEEEEEcCCCCEEEEE
Q psy4650 144 -GSVRVWHSGTH--R-----LE-ISLTY-GLERVWTISSLKGSNNVAIG 182 (381)
Q Consensus 144 -~~i~vwd~~~~--~-----~~-~~~~~-~~~~v~~v~~~~~~~~l~~~ 182 (381)
..|..|+...+ . .+ ..+.. .......+.|.|+|.+.++.
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 56777776644 1 11 11221 11234568888888765553
No 331
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=88.67 E-value=10 Score=32.04 Aligned_cols=105 Identities=13% Similarity=0.107 Sum_probs=51.3
Q ss_pred eEEEEEecC----CeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCC------CeEEEEECCCCeEEE
Q psy4650 47 EYKISYQES----SRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADD------RLVKIWDYQNKTCVQ 116 (381)
Q Consensus 47 ~~~~s~~~d----~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d------~~v~vwd~~~~~~~~ 116 (381)
.+.+.|+.+ ..+.+||+....-..+..+..-...-.++.+ ++. .++.|+.+ ..+.+||..+..-..
T Consensus 57 ~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~--iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 57 VVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGK--IYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp EEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTE--EEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred EEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCE--EEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 344555533 5788888865332333322211111122222 322 56666654 468888988775322
Q ss_pred E--eccCCCCEEEEEEecCCCEEEEEeC---------CCCEEEEeCCCCeee
Q psy4650 117 T--LEGHGQNISAVCFHPELPIVITGSE---------DGSVRVWHSGTHRLE 157 (381)
Q Consensus 117 ~--~~~~~~~v~~~~~~p~~~~l~s~~~---------d~~i~vwd~~~~~~~ 157 (381)
. +........++. .++..++.|+. -..+.+||..+.+..
T Consensus 133 ~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~ 182 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT 182 (306)
T ss_dssp ECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE
T ss_pred CCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE
Confidence 2 111111112222 25555555543 345888998877643
No 332
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=88.52 E-value=12 Score=32.61 Aligned_cols=113 Identities=11% Similarity=-0.055 Sum_probs=67.7
Q ss_pred ceEEEEEecCCeEEEecCCCccceeeEeeccc-cccEEEEEee--eCCCccEEEEE-cCCCeEEEEECCCCeEEEEecc-
Q psy4650 46 IEYKISYQESSRVKAFNPIQVATLILKTLYGH-EKGVNCVDYY--HGGDKPYLISG-ADDRLVKIWDYQNKTCVQTLEG- 120 (381)
Q Consensus 46 ~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h-~~~v~~~~~~--~~~~~~~l~s~-~~d~~v~vwd~~~~~~~~~~~~- 120 (381)
...++.++.||.+.-+|..+ ...+.+++.. ..++....-. +.+.. .++.. ..||.+..++..+|.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~t--G~~~W~~~~~~~~p~~~~~~~~~~~~~~-~~vv~p~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRN--GHIIWSIEPENFQPLIEIQEPSRLETYE-TLIIEPFGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEEETTSCEEEEETTT--TEEEEEECGGGSCCSEECCCSCTTTSSE-EEEECCSTTTEEEEEETTTEEEEEEEEHH
T ss_pred CCEEEEEeCCCeEEEEECCC--CcEEEEecCCccCCcEEecCCccccCCc-EEEEEECCCCEEEEEECCCCcEEeeeccc
Confidence 34677888899988888753 4455555432 1222221100 11111 23333 6899999999988865544321
Q ss_pred ---CCCCEEEEE----E-e----cCCCEEEEEeCCCCEEEEeCCCCeeeEEEec
Q psy4650 121 ---HGQNISAVC----F-H----PELPIVITGSEDGSVRVWHSGTHRLEISLTY 162 (381)
Q Consensus 121 ---~~~~v~~~~----~-~----p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 162 (381)
...++.. . . . -.+..+.+|+.++.+.-.|+.+|+.++.+..
T Consensus 87 ~lv~~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 87 QLVSTSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HHHTTCSEEE-ECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred cceecccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 1222221 0 0 0 0345778899999999999999999998864
No 333
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=88.21 E-value=13 Score=32.58 Aligned_cols=103 Identities=14% Similarity=0.102 Sum_probs=56.8
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeec---cccccEEEEEeeeC---CCccEEEEEcC---C---
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLY---GHEKGVNCVDYYHG---GDKPYLISGAD---D--- 101 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~---~h~~~v~~~~~~~~---~~~~~l~s~~~---d--- 101 (381)
..|..+.+.+++. ++++ ..+|.|++++... . ..+..+. ........++++|+ +.. +.++-+. +
T Consensus 29 ~~P~~ia~~pdG~-l~V~-e~~g~I~~~d~~G-~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~-lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVT-ERPGRLVLISPSG-K-KLVASFDVANVGEAGLLGLALHPEFPKKSW-VYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTE-EEEE-ETTTEEEEECSSC-E-EEEEECCCCCSTTCSEEEEEECTTTTTSCE-EEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCe-EEEE-eCCCEEEEEeCCC-c-eEeeccceeecCCCceeeEEeCCCCCcCCE-EEEEEeccCCCCCc
Confidence 3577788877744 4444 5558999997532 2 2233221 22356889999986 332 3333331 3
Q ss_pred -CeEEEEECCCC-------eEE-EEecc-CCCCEEEEEEecCCCEEEEEe
Q psy4650 102 -RLVKIWDYQNK-------TCV-QTLEG-HGQNISAVCFHPELPIVITGS 141 (381)
Q Consensus 102 -~~v~vwd~~~~-------~~~-~~~~~-~~~~v~~~~~~p~~~~l~s~~ 141 (381)
..|..|+.... +.+ ..+.. .......+.|.|+|.+.++.+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 56666776543 111 11221 111236799999998666543
No 334
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=87.73 E-value=19 Score=34.22 Aligned_cols=144 Identities=4% Similarity=-0.111 Sum_probs=80.6
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEE
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 115 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 115 (381)
+..+..++....+.++-...+.|+.+++...... ..+........++++.+.+. ++..+-+..+.|.+.+.......
T Consensus 351 ~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~--~v~~~~~~~p~GlAvD~~~~-~lY~tD~~~~~I~v~~~~G~~~~ 427 (619)
T 3s94_A 351 AIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQ--FVVTAQIAHPDGIAVDWVAR-NLYWTDTGTDRIEVTRLNGTMRK 427 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSCCCEEEEETTTT-EEEEEETTTTEEEEEETTSCSCE
T ss_pred cEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccE--EEEECCCCCcCceEEecccC-cEEEEeCCCCcEEEEeCCCCeEE
Confidence 4556666544555555556677888877532211 11222234566888875444 25666677889999988755432
Q ss_pred EEeccCCCCEEEEEEecCCCEEEEEeC--CCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEE
Q psy4650 116 QTLEGHGQNISAVCFHPELPIVITGSE--DGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIG 182 (381)
Q Consensus 116 ~~~~~~~~~v~~~~~~p~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~ 182 (381)
..+...-.....++++|....+.-+.. ...|...++............-.....+++++.+..|..+
T Consensus 428 ~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~a 496 (619)
T 3s94_A 428 ILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWG 496 (619)
T ss_dssp EEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred EEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEE
Confidence 223333345689999997555544433 3556666665432222222233456677777654444333
No 335
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=86.50 E-value=14 Score=31.15 Aligned_cols=54 Identities=13% Similarity=0.148 Sum_probs=29.8
Q ss_pred CeEEEEECCCCeEEEE--eccCCCCEEEEEEecCCCEEEEEeCC-----CCEEEEeCCCCeee
Q psy4650 102 RLVKIWDYQNKTCVQT--LEGHGQNISAVCFHPELPIVITGSED-----GSVRVWHSGTHRLE 157 (381)
Q Consensus 102 ~~v~vwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~s~~~d-----~~i~vwd~~~~~~~ 157 (381)
..+.+||..+..-... +........++. -++..++.||.+ ..+.+||..+.+..
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 233 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWR 233 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEE
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEe
Confidence 4578889887653221 221111112222 256666677654 36889999877654
No 336
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=85.63 E-value=13 Score=33.41 Aligned_cols=91 Identities=5% Similarity=-0.013 Sum_probs=61.7
Q ss_pred CCeEEEEECCCCeEEEEeccC----CCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCe------------eeEEEec--
Q psy4650 101 DRLVKIWDYQNKTCVQTLEGH----GQNISAVCFHPELPIVITGSEDGSVRVWHSGTHR------------LEISLTY-- 162 (381)
Q Consensus 101 d~~v~vwd~~~~~~~~~~~~~----~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~------------~~~~~~~-- 162 (381)
++.||.-++......+.++.. -..+..+..+|+|.+||..+ +..|.|-.+..+. ..+.+.-
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~ 118 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDE 118 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGG
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCC
Confidence 366676666544334444332 12577899999999998876 4578888887322 1123322
Q ss_pred ----CCcceEEEEEcCC---CCEEEEEeCCCeEEEEe
Q psy4650 163 ----GLERVWTISSLKG---SNNVAIGYDEGSVLLKV 192 (381)
Q Consensus 163 ----~~~~v~~v~~~~~---~~~l~~~~~dg~v~i~~ 192 (381)
....|..+.|||- +..|++-..|+.|++|+
T Consensus 119 ~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yD 155 (452)
T 3pbp_A 119 EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFD 155 (452)
T ss_dssp CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEE
T ss_pred cccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEE
Confidence 2467999999996 45899999999999965
No 337
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=85.62 E-value=15 Score=30.98 Aligned_cols=62 Identities=13% Similarity=0.093 Sum_probs=34.1
Q ss_pred EEEEEcCC-----CeEEEEECCCCeEEEE--eccCCCCEEEEEEecCCCEEEEEeCC-----CCEEEEeCCCCeee
Q psy4650 94 YLISGADD-----RLVKIWDYQNKTCVQT--LEGHGQNISAVCFHPELPIVITGSED-----GSVRVWHSGTHRLE 157 (381)
Q Consensus 94 ~l~s~~~d-----~~v~vwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~s~~~d-----~~i~vwd~~~~~~~ 157 (381)
.++.|+.+ ..+.+||..+..-... +........++.+ ++..++.||.+ ..+.+||..+.+..
T Consensus 171 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 171 LYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp EEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred EEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 55666544 4578888877643221 1111111122222 56666666654 56889998877543
No 338
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=85.46 E-value=15 Score=30.77 Aligned_cols=96 Identities=16% Similarity=0.165 Sum_probs=47.9
Q ss_pred eEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCC-----CeEEEEECCCCeEEEE--eccCCCCEEEEE
Q psy4650 57 RVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADD-----RLVKIWDYQNKTCVQT--LEGHGQNISAVC 129 (381)
Q Consensus 57 ~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d-----~~v~vwd~~~~~~~~~--~~~~~~~v~~~~ 129 (381)
.+.+||+....-..+..+......-.++.+ ++. .++.|+.+ ..+.++|..+..-... +........++.
T Consensus 129 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~--iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 204 (301)
T 2vpj_A 129 SMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGV--IYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL 204 (301)
T ss_dssp EEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTE--EEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred eEEEEcCCCCeEEECCCCCCCcccceEEEE--CCE--EEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE
Confidence 578888865333333333211111112222 322 55666544 4588889887753222 111111112222
Q ss_pred EecCCCEEEEEeCC-----CCEEEEeCCCCeeeE
Q psy4650 130 FHPELPIVITGSED-----GSVRVWHSGTHRLEI 158 (381)
Q Consensus 130 ~~p~~~~l~s~~~d-----~~i~vwd~~~~~~~~ 158 (381)
.++..++.|+.+ ..+.+||..+.+...
T Consensus 205 --~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 205 --LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp --ETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred --ECCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 255666666653 468899998776543
No 339
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=84.58 E-value=20 Score=31.38 Aligned_cols=123 Identities=17% Similarity=0.031 Sum_probs=69.0
Q ss_pred CCeEEEecCCCc--cceeeEeecccc-ccEEEEEeeeCCCccEEEEEc-----------------CCCeEEEEECCCCeE
Q psy4650 55 SSRVKAFNPIQV--ATLILKTLYGHE-KGVNCVDYYHGGDKPYLISGA-----------------DDRLVKIWDYQNKTC 114 (381)
Q Consensus 55 d~~v~i~~~~~~--~~~~~~~l~~h~-~~v~~~~~~~~~~~~~l~s~~-----------------~d~~v~vwd~~~~~~ 114 (381)
+.++.+|+.... ....+.++.+.. ...+.+.+.++|. +.++.. ..|.|.-+|. ++.
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~--fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~ 213 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH--FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDV 213 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE--EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCC
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC--EEecCCcEeCCcccccchhhccCCccEEEEEEC--CeE
Confidence 457777766432 233344555432 3578899998775 555543 1233444443 432
Q ss_pred EEEeccCCCCEEEEEEecCCCEEEEE-eCCCCEEEEeCCC-Cee--eEEEecCCcceEEEEEcC-CCCEEEEEe
Q psy4650 115 VQTLEGHGQNISAVCFHPELPIVITG-SEDGSVRVWHSGT-HRL--EISLTYGLERVWTISSLK-GSNNVAIGY 183 (381)
Q Consensus 115 ~~~~~~~~~~v~~~~~~p~~~~l~s~-~~d~~i~vwd~~~-~~~--~~~~~~~~~~v~~v~~~~-~~~~l~~~~ 183 (381)
.....+ -...+.++|+|+++.+..+ +..+.|..||+.. |.. ...+ ........++..+ +|++.+++.
T Consensus 214 ~~~~~~-l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 214 RVVAEG-FDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEEEE-ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred EEeecC-CcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence 222222 2345899999999876655 4578899999863 332 1222 1234456666776 466555443
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=83.85 E-value=19 Score=30.51 Aligned_cols=63 Identities=10% Similarity=0.122 Sum_probs=34.1
Q ss_pred EEEEEcC------CCeEEEEECCCCeEEEE--eccCCCCEEEEEEecCCCEEEEEeCCC-----CEEEEeCCCCeeeE
Q psy4650 94 YLISGAD------DRLVKIWDYQNKTCVQT--LEGHGQNISAVCFHPELPIVITGSEDG-----SVRVWHSGTHRLEI 158 (381)
Q Consensus 94 ~l~s~~~------d~~v~vwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~s~~~d~-----~i~vwd~~~~~~~~ 158 (381)
.++.|+. -..+.++|..+..-... +........++. -++..++.||.++ .+.+||..+.+...
T Consensus 151 iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 151 VYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAP 226 (315)
T ss_dssp EEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred EEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence 5566655 24688889887642221 111111112222 2566677776544 47888988775443
No 341
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=83.77 E-value=27 Score=32.19 Aligned_cols=74 Identities=12% Similarity=-0.033 Sum_probs=47.7
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCC-------Cccc------------eeeEeeccccccEEEEEeeeCCCccE
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPI-------QVAT------------LILKTLYGHEKGVNCVDYYHGGDKPY 94 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~-------~~~~------------~~~~~l~~h~~~v~~~~~~~~~~~~~ 94 (381)
.+|..+..+++...+.++-..++.|..+++. .... ..+..+ +....-..++|+|++.. +
T Consensus 247 ~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~-l 324 (496)
T 3kya_A 247 KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKY-A 324 (496)
T ss_dssp SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSE-E
T ss_pred CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCE-E
Confidence 4667777777666677777788899999985 2111 011222 22344678999998872 3
Q ss_pred EEEEcCCCeEEEEEC
Q psy4650 95 LISGADDRLVKIWDY 109 (381)
Q Consensus 95 l~s~~~d~~v~vwd~ 109 (381)
+++-+..+.|+.++.
T Consensus 325 YvaD~~~h~I~kid~ 339 (496)
T 3kya_A 325 YFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEETTTTEEEEEEE
T ss_pred EEEeCCCCEEEEEec
Confidence 455567788888554
No 342
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=82.98 E-value=20 Score=30.10 Aligned_cols=106 Identities=9% Similarity=0.116 Sum_probs=49.1
Q ss_pred eEEEEEecC-----CeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCC-----eEEEEECCCCeEEE
Q psy4650 47 EYKISYQES-----SRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDR-----LVKIWDYQNKTCVQ 116 (381)
Q Consensus 47 ~~~~s~~~d-----~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~-----~v~vwd~~~~~~~~ 116 (381)
.+.+.|+.+ ..+.+||+....-..+..+......-.++.+ ++. .++.|+.++ .+.+||..+..-..
T Consensus 63 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~--iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGL--LYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp EEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE--EEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred EEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCE--EEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 344455533 3577888764332222222211111122222 222 555665443 56778887765322
Q ss_pred E--eccCCCCEEEEEEecCCCEEEEEeCC-------CCEEEEeCCCCeeeE
Q psy4650 117 T--LEGHGQNISAVCFHPELPIVITGSED-------GSVRVWHSGTHRLEI 158 (381)
Q Consensus 117 ~--~~~~~~~v~~~~~~p~~~~l~s~~~d-------~~i~vwd~~~~~~~~ 158 (381)
. +........++. .++..++.||.+ ..+.+||..+.+...
T Consensus 139 ~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~ 187 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTY 187 (302)
T ss_dssp ECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTEEEE
T ss_pred cCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE
Confidence 1 211111112222 255556665532 358889988776443
No 343
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=82.21 E-value=23 Score=30.33 Aligned_cols=108 Identities=8% Similarity=0.011 Sum_probs=60.0
Q ss_pred cccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE-EEEeccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCee
Q psy4650 78 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC-VQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRL 156 (381)
Q Consensus 78 ~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~-~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~ 156 (381)
.+.+..+.+.+++. .++.+ .++.|.. ....+.. ......+...+..+.+.|++..++.+...+..+-+|-.....
T Consensus 121 ~~~~~~i~~~~~~~--~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW 196 (327)
T 2xbg_A 121 PGSPRLIKALGNGS--AEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAW 196 (327)
T ss_dssp SSCEEEEEEEETTE--EEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSC
T ss_pred CCCeEEEEEECCCC--EEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCce
Confidence 34577777776543 45554 4554432 2222321 222234556789999999888777665444444445311111
Q ss_pred eEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 157 EISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 157 ~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
...-......+..+.+.+++..++ ++.+|.++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~ 229 (327)
T 2xbg_A 197 EPHNRTTSRRLHNMGFTPDGRLWM-IVNGGKIAF 229 (327)
T ss_dssp EEEECCSSSCEEEEEECTTSCEEE-EETTTEEEE
T ss_pred eECCCCCCCccceeEECCCCCEEE-EeCCceEEE
Confidence 111123446788888989887654 445677665
No 344
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=81.30 E-value=38 Score=32.25 Aligned_cols=151 Identities=8% Similarity=-0.035 Sum_probs=82.5
Q ss_pred ceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEeecc------ccccEEEEEeeeCCCccEEEEEcCCCeEEEEEC
Q psy4650 36 KVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYG------HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDY 109 (381)
Q Consensus 36 ~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~~------h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~ 109 (381)
.+.+..++....+..+-...+.|+.+++..... ...+.. ....+.++++...+. ++..+-+..+.|.+.+.
T Consensus 342 ~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~--~~v~~~~~~~~~~~~~p~glAvD~~~~-nLY~td~~~~~I~v~~~ 418 (628)
T 4a0p_A 342 VRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQG--FTVVVSSVPSQNLEIQPYDLSIDIYSR-YIYWTCEATNVINVTRL 418 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEC--------CCCEEEEEEETTTT-EEEEEETTTTEEEEEET
T ss_pred ceEEEEecCCCeEEEEecCcceEEEEEcCCCCc--eEEEEcccccccccCCcceEEeeccCC-eEEEEcCCCCEEEEEEC
Confidence 455555555455555555566777776643111 111211 234678888877655 25667778889999998
Q ss_pred CCCeEEEEe-ccCCCCEEEEEEecCCCEEEEEeC--CC-CEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEe-C
Q psy4650 110 QNKTCVQTL-EGHGQNISAVCFHPELPIVITGSE--DG-SVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGY-D 184 (381)
Q Consensus 110 ~~~~~~~~~-~~~~~~v~~~~~~p~~~~l~s~~~--d~-~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~-~ 184 (381)
.. .....+ ........+++++|....+.-... .. .|...++............-.....+++++.+..|..+. .
T Consensus 419 ~G-~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~ 497 (628)
T 4a0p_A 419 DG-RSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSD 497 (628)
T ss_dssp TS-CEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred CC-CeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCC
Confidence 64 433333 333456799999995554433322 22 466666653332222222334567788887655444433 2
Q ss_pred CCeEEE
Q psy4650 185 EGSVLL 190 (381)
Q Consensus 185 dg~v~i 190 (381)
.+.|..
T Consensus 498 ~~~I~~ 503 (628)
T 4a0p_A 498 LRRIES 503 (628)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 344443
No 345
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=80.27 E-value=1.1 Score=39.79 Aligned_cols=41 Identities=15% Similarity=0.080 Sum_probs=28.6
Q ss_pred EeecHHHHHHHHHHHHHHhHHHHHHHHHh--CCCCcccccccc
Q psy4650 340 HNVSRARFESLIGGLLTSFVQPIEDVLSR--SNITHDQINKFT 380 (381)
Q Consensus 340 ~~~~~~~~e~~~~~~~~~~~~~~~~~l~~--~~~~~~~i~~v~ 380 (381)
..++++.|++++++++.++...++++|+. +++...+++.|+
T Consensus 269 ~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~Iv 311 (377)
T 2ych_A 269 ERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGY 311 (377)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEE
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEE
Confidence 46888999999999999999999999995 567777888775
No 346
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=79.98 E-value=30 Score=30.16 Aligned_cols=107 Identities=13% Similarity=0.112 Sum_probs=59.5
Q ss_pred hcceeeeecCCCceEEEEEecCCeEEEecCCCccceeeEee----ccccccEEEEEeeeC--CCccEEEE--EcCCCeEE
Q psy4650 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTL----YGHEKGVNCVDYYHG--GDKPYLIS--GADDRLVK 105 (381)
Q Consensus 34 ~~~~~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l----~~h~~~v~~~~~~~~--~~~~~l~s--~~~d~~v~ 105 (381)
..|..+.+.+++ .++++-...|.|++++........+..+ ....+....++++|+ .+..+.++ ...+..|.
T Consensus 32 ~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 32 NSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 457788888875 4666655588999998753232223322 123567899999984 11112232 22344555
Q ss_pred EEECCCC----------eEEE-Eec-cCCCCEEEEEEecCCCEEEEEe
Q psy4650 106 IWDYQNK----------TCVQ-TLE-GHGQNISAVCFHPELPIVITGS 141 (381)
Q Consensus 106 vwd~~~~----------~~~~-~~~-~~~~~v~~~~~~p~~~~l~s~~ 141 (381)
-|....+ +.+. .+. .....-..+.|.|+|.+.++.+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 5555431 1111 221 1111336799999998766654
No 347
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=79.24 E-value=27 Score=29.28 Aligned_cols=98 Identities=12% Similarity=0.216 Sum_probs=50.1
Q ss_pred CCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCC----CeEEEEECCCCeEEE--EeccCCCCEEEE
Q psy4650 55 SSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADD----RLVKIWDYQNKTCVQ--TLEGHGQNISAV 128 (381)
Q Consensus 55 d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d----~~v~vwd~~~~~~~~--~~~~~~~~v~~~ 128 (381)
...+.+||+....-..+..+......-.++.+ ++. +++.|+.+ ..+.++|..+..-.. .+........++
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~--lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 98 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNV--VYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAAC 98 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTE--EEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEE--CCE--EEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEE
Confidence 35788899865433333222221111122222 222 56666644 678888988775322 222111111222
Q ss_pred EEecCCCEEEEEeCC------CCEEEEeCCCCeeeE
Q psy4650 129 CFHPELPIVITGSED------GSVRVWHSGTHRLEI 158 (381)
Q Consensus 129 ~~~p~~~~l~s~~~d------~~i~vwd~~~~~~~~ 158 (381)
. -++..++.||.+ ..+.+||..+.+...
T Consensus 99 ~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 99 A--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp E--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred E--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 2 256666777654 468889988776433
No 348
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=79.05 E-value=1.8 Score=36.28 Aligned_cols=55 Identities=5% Similarity=0.036 Sum_probs=46.6
Q ss_pred ChHHHHHHHHHHhhhhhhhhHhhhccccceeeEeeccccCcceEEeecHHHHHHHHHHHHHH
Q psy4650 296 SRARFESLIGGLLTSFVQPCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTS 357 (381)
Q Consensus 296 tr~~fe~l~~~l~~~~~~~~~~~Ls~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 357 (381)
++..|++++.+.+.++.+.+++.+.... .+...++.||..+.|.+.+++++.|+.
T Consensus 198 ~~~~~~~~~~~~~~~i~~~i~~~l~~~~-------~~~~ivL~GG~a~~~~l~~~l~~~l~~ 252 (272)
T 3h1q_A 198 RHREIMRVVRPVIEKMALIVKEVIKNYD-------QTLPVYVVGGTAYLTGFSEEFSRFLGK 252 (272)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTTSC-------SSCCEEEESGGGGSTTHHHHHHHHHSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCCEEEEECCccchhhHHHHHHHHhCC
Confidence 5889999999999999999999998642 244667789999999999999998863
No 349
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=78.75 E-value=32 Score=34.66 Aligned_cols=37 Identities=19% Similarity=0.296 Sum_probs=29.3
Q ss_pred cEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEe
Q psy4650 80 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 118 (381)
Q Consensus 80 ~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~ 118 (381)
.+.++...++.. ++.+-+.|+++|+|++.++.++.+.
T Consensus 237 ~~~~~~~~~~~~--~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYN--VLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTT--EEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCc--EEEEEECCCEEEEEECCCCCeEeee
Confidence 456666665443 8899999999999999999887764
No 350
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=78.60 E-value=28 Score=29.08 Aligned_cols=106 Identities=13% Similarity=0.057 Sum_probs=51.9
Q ss_pred eEEEEEecC-----CeEEEecCCCcc---ceeeEeeccccccEEEEEeeeCCCccEEEEEcCC-----CeEEEEECCCCe
Q psy4650 47 EYKISYQES-----SRVKAFNPIQVA---TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADD-----RLVKIWDYQNKT 113 (381)
Q Consensus 47 ~~~~s~~~d-----~~v~i~~~~~~~---~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d-----~~v~vwd~~~~~ 113 (381)
.+.+.|+.+ ..+.+||+.... -..+..+......-.++.+ ++. .++.|+.+ ..+.++|..+..
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~--lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDM--IYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTE--EEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCE--EEEEcccCCCcccceEEEEcCCCCe
Confidence 345555543 368888886544 2222222211111122222 322 55566543 367888987765
Q ss_pred EE--EEeccCCCCEEEEEEecCCCEEEEEeCC-----CCEEEEeCCCCeeeE
Q psy4650 114 CV--QTLEGHGQNISAVCFHPELPIVITGSED-----GSVRVWHSGTHRLEI 158 (381)
Q Consensus 114 ~~--~~~~~~~~~v~~~~~~p~~~~l~s~~~d-----~~i~vwd~~~~~~~~ 158 (381)
-. ..+........++. .++..++.||.+ ..+.+||..+.+...
T Consensus 140 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp EEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred EEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 22 22221111112222 256666666653 458889988776543
No 351
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=78.34 E-value=13 Score=39.20 Aligned_cols=134 Identities=8% Similarity=0.048 Sum_probs=73.9
Q ss_pred cCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCcc-EEEEEcC---CCeEEEEECCCC---eEEE------Eecc
Q psy4650 54 ESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKP-YLISGAD---DRLVKIWDYQNK---TCVQ------TLEG 120 (381)
Q Consensus 54 ~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~-~l~s~~~---d~~v~vwd~~~~---~~~~------~~~~ 120 (381)
-.|.+.+|+.+. ...+.+.||.+....+...-..... .++-+.. .+.++|-++... .+.. .+..
T Consensus 177 v~G~mQLyS~er---~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~ 253 (1630)
T 1xi4_A 177 VVGAMQLYSVDR---KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP 253 (1630)
T ss_pred ccceeeeeeccc---ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCC
Confidence 347788888753 4445667887665555442111111 2322221 268888887432 1111 1111
Q ss_pred ---CCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 121 ---HGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 121 ---~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
..+--.++..++.-..+..-..-|.+.++|+.+|+++..-+-....|...+.+....-+++....|.|.-
T Consensus 254 ~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~ 326 (1630)
T 1xi4_A 254 PEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLS 326 (1630)
T ss_pred cccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEE
Confidence 1222356667777777777778899999999999988766655555555544433222333334454443
No 352
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=77.44 E-value=35 Score=29.62 Aligned_cols=101 Identities=9% Similarity=0.009 Sum_probs=54.0
Q ss_pred ccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEe-------ccCCCCEEEEEEecC---CCEE-EEEeC-----
Q psy4650 79 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL-------EGHGQNISAVCFHPE---LPIV-ITGSE----- 142 (381)
Q Consensus 79 ~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~-------~~~~~~v~~~~~~p~---~~~l-~s~~~----- 142 (381)
.....++|.|++.. +..+...|.|++++.. +.....+ .........++++|+ +..+ ++-..
T Consensus 18 ~~P~~i~~~pdG~~--l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 18 DHPWALAFLPDNHG--MLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp SSEEEEEECSTTCC--EEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCcEEEEEcCCCCE--EEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 45678999997752 4444567999988853 3321111 112346789999995 4433 33222
Q ss_pred --CCCEEEEeCCCC--ee--eEE-Eec------CCcceEEEEEcCCCCEEEEE
Q psy4650 143 --DGSVRVWHSGTH--RL--EIS-LTY------GLERVWTISSLKGSNNVAIG 182 (381)
Q Consensus 143 --d~~i~vwd~~~~--~~--~~~-~~~------~~~~v~~v~~~~~~~~l~~~ 182 (381)
...|..|++..+ .. ... +.. ....-..+.|.|+|.+.++.
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIAL 147 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEE
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEE
Confidence 224666665432 11 111 111 11223568888888654444
No 353
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=77.33 E-value=42 Score=30.43 Aligned_cols=105 Identities=9% Similarity=0.034 Sum_probs=59.1
Q ss_pred cccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE--EEEecc------CCCCEEEEEEecC---CCEEE-EEeC---
Q psy4650 78 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC--VQTLEG------HGQNISAVCFHPE---LPIVI-TGSE--- 142 (381)
Q Consensus 78 ~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~--~~~~~~------~~~~v~~~~~~p~---~~~l~-s~~~--- 142 (381)
-....+++|.|++. ++++-...+.|++++..++.. +..+.. .......++|+|+ +..|. +-+.
T Consensus 26 l~~P~~~a~~pdG~--l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 26 LNKPHALLWGPDNQ--IWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp CSSEEEEEECTTSC--EEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred CCCceEEEEcCCCc--EEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 34567999999876 566554445788887655543 222321 2356789999995 44333 3221
Q ss_pred ---------CCCEEEEeCCCC--e-----eeE-EEec-CCcceEEEEEcCCCCEEEEEeC
Q psy4650 143 ---------DGSVRVWHSGTH--R-----LEI-SLTY-GLERVWTISSLKGSNNVAIGYD 184 (381)
Q Consensus 143 ---------d~~i~vwd~~~~--~-----~~~-~~~~-~~~~v~~v~~~~~~~~l~~~~~ 184 (381)
...|.-|++..+ . .+. .+.. .......+.|.|+|.+.++.++
T Consensus 104 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 104 KSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp TC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 124555554321 1 111 1221 2234688999999987666543
No 354
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=73.79 E-value=39 Score=28.37 Aligned_cols=62 Identities=8% Similarity=0.115 Sum_probs=32.8
Q ss_pred EEEEEcCC-----CeEEEEECCCCeEEEE--eccCCCCEEEEEEecCCCEEEEEeCC-----CCEEEEeCCCCeee
Q psy4650 94 YLISGADD-----RLVKIWDYQNKTCVQT--LEGHGQNISAVCFHPELPIVITGSED-----GSVRVWHSGTHRLE 157 (381)
Q Consensus 94 ~l~s~~~d-----~~v~vwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~s~~~d-----~~i~vwd~~~~~~~ 157 (381)
.++.|+.+ ..+.+||..+..-... +........++.+ ++..++.||.+ ..+.+||..+.+..
T Consensus 124 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 197 (308)
T 1zgk_A 124 IYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWR 197 (308)
T ss_dssp EEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred EEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEe
Confidence 55555533 4577888877643221 1111111122222 56666666653 45888898876543
No 355
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=73.15 E-value=46 Score=28.93 Aligned_cols=109 Identities=12% Similarity=0.018 Sum_probs=62.1
Q ss_pred eeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE--EEEe----ccCCCCEEEEEEecC---CCEE-EEE--
Q psy4650 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC--VQTL----EGHGQNISAVCFHPE---LPIV-ITG-- 140 (381)
Q Consensus 73 ~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~--~~~~----~~~~~~v~~~~~~p~---~~~l-~s~-- 140 (381)
.+-..-..-..++|.|++. ++++-...|.|++++..++.. +..+ .........++++|+ ...| ++-
T Consensus 26 ~va~gL~~P~~ia~~pdG~--llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGD--LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS 103 (347)
T ss_dssp EEECCCSSEEEEEECTTSC--EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred EeecCCCCceEEEEcCCCc--EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence 3334455678999999886 666665589999988765543 2222 123456799999995 3333 321
Q ss_pred eCCCCEEEEeCCCC----------eeeE-EEec-CCcceEEEEEcCCCCEEEEEe
Q psy4650 141 SEDGSVRVWHSGTH----------RLEI-SLTY-GLERVWTISSLKGSNNVAIGY 183 (381)
Q Consensus 141 ~~d~~i~vwd~~~~----------~~~~-~~~~-~~~~v~~v~~~~~~~~l~~~~ 183 (381)
..++.|.-|.+..+ +.+. .+.. ....-..+.|.|+|.+.++.+
T Consensus 104 ~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 104 ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 23445555655431 1111 1221 112334688888887665544
No 356
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=72.67 E-value=37 Score=27.56 Aligned_cols=140 Identities=8% Similarity=-0.023 Sum_probs=73.7
Q ss_pred eeeecCCCceEEEEEecCCeEEEecCCCcccee----eEee--ccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCC
Q psy4650 38 DITTNKDMIEYKISYQESSRVKAFNPIQVATLI----LKTL--YGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 111 (381)
Q Consensus 38 ~i~~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~----~~~l--~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~ 111 (381)
++.++|++..|.+ .+|.+.-.++....... -..+ .|... ..++.|.|++. +.++ .||.|.-++..+
T Consensus 45 ~laf~P~G~LYaV---~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~--LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 45 FLFLSPGGELYGV---LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGY--LYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp EEEECTTSCEEEE---ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSC--EEEE--ETTEEEEESCCC
T ss_pred eEEECCCccEEEE---eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCC--EEEe--CCCEEEEeCCCc
Confidence 6778886564444 66777777764311111 1111 02222 47788888776 4444 569888777533
Q ss_pred CeEE------EEe-ccCCCCEEEEEEecCCCEEEEEeCCCCEEEEeCCCCe------eeEEEe-cCCcceEEEEEcCCCC
Q psy4650 112 KTCV------QTL-EGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHR------LEISLT-YGLERVWTISSLKGSN 177 (381)
Q Consensus 112 ~~~~------~~~-~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~------~~~~~~-~~~~~v~~v~~~~~~~ 177 (381)
...- ..+ .+--..+.+|.+.|+|.+.+.. |+.+.-+...++. ....+- ..-..-..+.|.+++.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 2111 111 1112467999999999877766 6665433322111 011111 2222344466778777
Q ss_pred EEEEEeCCCeEE
Q psy4650 178 NVAIGYDEGSVL 189 (381)
Q Consensus 178 ~l~~~~~dg~v~ 189 (381)
+.++. +|.+.
T Consensus 195 l~~v~--~g~~Y 204 (236)
T 1tl2_A 195 LFGVQ--GGKFY 204 (236)
T ss_dssp EEEEE--TTEEE
T ss_pred EEEEe--CCeEE
Confidence 66655 55443
No 357
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=70.58 E-value=47 Score=27.94 Aligned_cols=54 Identities=11% Similarity=0.011 Sum_probs=29.0
Q ss_pred CeEEEEECCCCeEEE--EeccCCCCEEEEEEecCCCEEEEEeC------CCCEEEEeCCCCeee
Q psy4650 102 RLVKIWDYQNKTCVQ--TLEGHGQNISAVCFHPELPIVITGSE------DGSVRVWHSGTHRLE 157 (381)
Q Consensus 102 ~~v~vwd~~~~~~~~--~~~~~~~~v~~~~~~p~~~~l~s~~~------d~~i~vwd~~~~~~~ 157 (381)
..+.++|..+..-.. .+...... .++. ..++..++.||. -..+.+||..+.+..
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 178 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYG-HTVL-SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWK 178 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBS-CEEE-EETTEEEEECCBCTTSCBCCCEEEEETTTTEEE
T ss_pred ceEEEECCCCCcEeECCCCCCcccc-eeEE-EECCEEEEEeCCCCCCcccceEEEEeCCCCeEE
Confidence 457888988764222 11111111 1222 235566666665 246888998876543
No 358
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=70.45 E-value=1e+02 Score=31.83 Aligned_cols=140 Identities=12% Similarity=0.126 Sum_probs=80.6
Q ss_pred CceEEEEEe----------cCCeEEEecCCCccceeeEeeccccccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeE
Q psy4650 45 MIEYKISYQ----------ESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114 (381)
Q Consensus 45 ~~~~~~s~~----------~d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 114 (381)
...+++.|. ..|.+++|+.....-..++ -....++|++++-.. | +|+.|- ..++++|++...+.
T Consensus 843 ~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~-~~~v~g~v~al~~~~-g---~Lla~i-g~~l~vy~l~~~~~ 916 (1158)
T 3ei3_A 843 PNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVA-EKEVKGAVYSMVEFN-G---KLLASI-NSTVRLYEWTTEKE 916 (1158)
T ss_dssp CCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEE-EEEESSCEEEEEEET-T---EEEEEE-TTEEEEEEECTTSC
T ss_pred CCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEE-EEEcCCcCEEEeeeC-C---EEEEEc-CCEEEEEECCCCce
Confidence 345666554 3577888887532222222 223468899987542 2 344433 47899999976543
Q ss_pred EE-EeccCCCCEEEEEEecCCCEEEEEeCCCCEEEE--eCCCCeeeEEE-ecCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 115 VQ-TLEGHGQNISAVCFHPELPIVITGSEDGSVRVW--HSGTHRLEISL-TYGLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 115 ~~-~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i~vw--d~~~~~~~~~~-~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
+. ....+. .+..+.....+.+++.|..-..+.++ +...++....- ......++++.+..++ .++.+..+|.+.+
T Consensus 917 L~~~~~~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~v 994 (1158)
T 3ei3_A 917 LRTECNHYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFV 994 (1158)
T ss_dssp EEEEEEECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEE
T ss_pred EEEEeeccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEE
Confidence 33 111121 12333333356788888776666664 44444433222 2355678888887654 6677888999888
Q ss_pred Ee
Q psy4650 191 KV 192 (381)
Q Consensus 191 ~~ 192 (381)
..
T Consensus 995 l~ 996 (1158)
T 3ei3_A 995 CQ 996 (1158)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 359
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=68.78 E-value=2.3 Score=38.30 Aligned_cols=81 Identities=12% Similarity=0.002 Sum_probs=54.1
Q ss_pred eeEEEecccCCcccccccChHHH---HHHHHHHh------hhhhhhhHhhhccccceeeEeeccccCcceEEeecHHHHH
Q psy4650 278 SNVFVESLYDGLDFHHNVSRARF---ESLIGGLL------TSFVQPCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFE 348 (381)
Q Consensus 278 ~~i~~~~l~~g~~~~~~itr~~f---e~l~~~l~------~~~~~~~~~~Ls~~~~~~~~~~~~~~~~~~~~~~~~~~~e 348 (381)
..+.++....|.....++++++| |.+-.|.+ ..+.+.+.++|.... ..+..+.+.+.++.||+...|-|.
T Consensus 254 ~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~-~~~~~~l~~~IvL~GG~s~~pg~~ 332 (418)
T 1k8k_A 254 KQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCP-IDVRRPLYKNIVLSGGSTMFRDFG 332 (418)
T ss_dssp EEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSC-GGGTTHHHHCEEEESGGGCSTTHH
T ss_pred eeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCC-HHHHHHHHhceEEeCCccccccHH
Confidence 35777776666677888999999 44433322 345666666665422 111122345667889999999999
Q ss_pred HHHHHHHHHhH
Q psy4650 349 SLIGGLLTSFV 359 (381)
Q Consensus 349 ~~~~~~~~~~~ 359 (381)
+.+++.++...
T Consensus 333 ~rl~~el~~~~ 343 (418)
T 1k8k_A 333 RRLQRDLKRTV 343 (418)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99998887764
No 360
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=68.19 E-value=54 Score=27.63 Aligned_cols=61 Identities=16% Similarity=0.176 Sum_probs=31.7
Q ss_pred EEEEEcC------CCeEEEEECCCCeEEEE--eccCCCCEEEEEEecCCCEEEEEeCC-----CCEEEEeCCCCee
Q psy4650 94 YLISGAD------DRLVKIWDYQNKTCVQT--LEGHGQNISAVCFHPELPIVITGSED-----GSVRVWHSGTHRL 156 (381)
Q Consensus 94 ~l~s~~~------d~~v~vwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~s~~~d-----~~i~vwd~~~~~~ 156 (381)
.++.|+. -..+.++|..+..-... +........++. -++..++.||.+ ..+.+||..+.+.
T Consensus 161 iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 161 IYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp EEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred EEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 5555553 24588899887753222 211111112222 256666666543 3466888877654
No 361
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=67.84 E-value=52 Score=34.85 Aligned_cols=225 Identities=13% Similarity=0.097 Sum_probs=108.0
Q ss_pred hhhhHHHhhhhhcccccccCCChhhHHHHhh--hcc--eeee---ecCCCceEEEEEecCCeEEEecCCCccceeeEeec
Q psy4650 3 RLISQAKNTIIKNKRALNTELTETDIETIVR--ETK--VDIT---TNKDMIEYKISYQESSRVKAFNPIQVATLILKTLY 75 (381)
Q Consensus 3 ~~~~~~~~t~~~~k~~~~~~~~~~~~~~~~~--~~~--~~i~---~~~~~~~~~~s~~~d~~v~i~~~~~~~~~~~~~l~ 75 (381)
.+++||...|+..|. |+..-..+++.-.| .+. -.|+ +-.+..--++| +..|.-|++.. ...+...+.
T Consensus 70 sAIMnP~~~iiALra--g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT---~~aVyHW~~~~-~s~P~k~fd 143 (1630)
T 1xi4_A 70 SAIMNPASKVIALKA--GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT---DNAVYHWSMEG-ESQPVKMFD 143 (1630)
T ss_pred hhccCCCcceEEEec--CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEc---CCeEEEeccCC-CCccHHHHh
Confidence 467899999999885 66654444443322 211 1222 22332333444 34799999864 333333333
Q ss_pred cc----cccEEEEEeeeCCCccEEEEE-------cCCCeEEEEECCCCeEEEEeccCCCCEEEEEEe--cCCCEEEEEe-
Q psy4650 76 GH----EKGVNCVDYYHGGDKPYLISG-------ADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH--PELPIVITGS- 141 (381)
Q Consensus 76 ~h----~~~v~~~~~~~~~~~~~l~s~-------~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~--p~~~~l~s~~- 141 (381)
-| ...|.....+++. .+++-. .-.|.+.+|....+. .+.+.||.+.-..+... +....+.+-.
T Consensus 144 R~~~L~~~QIinY~~d~~~--kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~ 220 (1630)
T 1xi4_A 144 RHSSLAGCQIINYRTDAKQ--KWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAV 220 (1630)
T ss_pred cchhcccCeeEEeeeCCCC--CeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEE
Confidence 33 2334444444433 355422 235777788776443 44556665433222221 1111222211
Q ss_pred ---CCCCEEEEeCCCC---eeeEE-------E--ecCCcceEEEEEcCCCCEEEEEeCCCeEEEEecCCCceEEEecCCC
Q psy4650 142 ---EDGSVRVWHSGTH---RLEIS-------L--TYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGC 206 (381)
Q Consensus 142 ---~d~~i~vwd~~~~---~~~~~-------~--~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i~~~~~~~~~~~d~~~~ 206 (381)
..+.++|-++... ..... + ....+...++..++.-..+..-+.-|.+.+ +|..+|
T Consensus 221 ~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~----------~d~~t~ 290 (1630)
T 1xi4_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHL----------YDLETG 290 (1630)
T ss_pred ecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEE----------Eecccc
Confidence 1367888887543 11100 0 011233445555555555666666677776 777777
Q ss_pred EEEEEecCceeecccc----cCCccccccCCceEEeeehHHHHH
Q psy4650 207 KIIWARHSEVQQANLK----TMPEVFENITAGVVLTLSVHVTIK 246 (381)
Q Consensus 207 ~~~~~~~~~~~~~~~~----~~~~~~~~~~dg~~l~~~~~d~~~ 246 (381)
..++.-.-.....-+. .....+..+..|+++.+.-.+...
T Consensus 291 ~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~i 334 (1630)
T 1xi4_A 291 TCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (1630)
T ss_pred hhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccchh
Confidence 7665422111110000 011113344577777766655443
No 362
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=65.41 E-value=12 Score=37.81 Aligned_cols=38 Identities=16% Similarity=0.188 Sum_probs=33.2
Q ss_pred CEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEe
Q psy4650 124 NISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLT 161 (381)
Q Consensus 124 ~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 161 (381)
.+.++...++..++.+-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56778888888899999999999999999999887753
No 363
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=64.46 E-value=32 Score=32.24 Aligned_cols=67 Identities=6% Similarity=-0.154 Sum_probs=45.7
Q ss_pred EEEEEEecCCCEEEEEeC-CCCEEEEeCCCC------ee-------eEEEecCCcceEEEEEcCCCCEEEEEeCCCeEEE
Q psy4650 125 ISAVCFHPELPIVITGSE-DGSVRVWHSGTH------RL-------EISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190 (381)
Q Consensus 125 v~~~~~~p~~~~l~s~~~-d~~i~vwd~~~~------~~-------~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~v~i 190 (381)
.+.+..+|+|++++.++. +.++.++|+..- +. ..... -.......+|.++|....+..-|..+.-
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence 377889999997776654 889999998731 11 11112 2345678999999965555567777777
Q ss_pred Ee
Q psy4650 191 KV 192 (381)
Q Consensus 191 ~~ 192 (381)
|+
T Consensus 404 Wn 405 (638)
T 3sbq_A 404 WN 405 (638)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 364
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=61.32 E-value=29 Score=32.55 Aligned_cols=103 Identities=12% Similarity=0.040 Sum_probs=65.7
Q ss_pred ccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCC------e-------EEEEeccCCCCEEEEEEecCCCEEEEEeCCCC
Q psy4650 79 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK------T-------CVQTLEGHGQNISAVCFHPELPIVITGSEDGS 145 (381)
Q Consensus 79 ~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~------~-------~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~ 145 (381)
.....+.++|+|.. .+++|-.+.++.++|+... + ...... -.-+-...+|.++|....+-.-|..
T Consensus 323 ksPHGv~vsPDGky-i~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 323 KNPHGCNTSSDGKY-FIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SSCCCEEECTTSCE-EEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CCCcceeeCCCCCE-EEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecce
Confidence 44567889999883 5667778999999998741 1 122222 2334578899999954455557999
Q ss_pred EEEEeCCCC----------eeeEEEecCCcceEEEEE------cCCCCEEEEEeC
Q psy4650 146 VRVWHSGTH----------RLEISLTYGLERVWTISS------LKGSNNVAIGYD 184 (381)
Q Consensus 146 i~vwd~~~~----------~~~~~~~~~~~~v~~v~~------~~~~~~l~~~~~ 184 (381)
|..|++... ..+..+..|- .+-.+.- .|+|++|++...
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~Y-qpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHY-QPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSS-CEEEEEETTTTSTTCCSCEEEEEES
T ss_pred EEEEeccHHHHHhcCccCCeeeecccccc-CCcccccCCCccCCCCccEEEEecc
Confidence 999998643 2344444332 2222322 478888888753
No 365
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=56.48 E-value=93 Score=26.56 Aligned_cols=17 Identities=12% Similarity=0.049 Sum_probs=10.3
Q ss_pred CeEEEecCCCccceeeE
Q psy4650 56 SRVKAFNPIQVATLILK 72 (381)
Q Consensus 56 ~~v~i~~~~~~~~~~~~ 72 (381)
..+.+||+....-..+.
T Consensus 168 ~~v~~yd~~~~~W~~~~ 184 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAG 184 (357)
T ss_dssp CEEEEEETTTTEEEEEE
T ss_pred ccEEEEeCCCCcEEECC
Confidence 47888998654333333
No 366
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=54.46 E-value=1.5e+02 Score=28.41 Aligned_cols=63 Identities=14% Similarity=0.245 Sum_probs=35.0
Q ss_pred EEEEEcCC------CeEEEEECCCCeEEEE--eccCCCCEEEEEEecCCCEEEEEeCCC--CEEEEeCCCCeee
Q psy4650 94 YLISGADD------RLVKIWDYQNKTCVQT--LEGHGQNISAVCFHPELPIVITGSEDG--SVRVWHSGTHRLE 157 (381)
Q Consensus 94 ~l~s~~~d------~~v~vwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~s~~~d~--~i~vwd~~~~~~~ 157 (381)
.++.||.+ ..+.+||..+..-... +...... ++.+...++..++.||.++ .+.+||..+.+..
T Consensus 454 lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~ 526 (695)
T 2zwa_A 454 LLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFK 526 (695)
T ss_dssp EEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEE
T ss_pred EEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceE
Confidence 55566543 3577888877542221 1111111 2233324777777777644 6899999887643
No 367
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=54.33 E-value=6.5 Score=34.16 Aligned_cols=32 Identities=22% Similarity=0.451 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 346 RFESLIGGLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 346 ~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.+|+-..++.. +.+++||++||++++|||.||
T Consensus 50 t~e~a~sdLa~---~Aa~~AL~~AGi~~~DID~II 81 (347)
T 3lma_A 50 NWEMAERKLME---DAVQSALSKQNLKKEDIDIFL 81 (347)
T ss_dssp SHHHHHHHHHH---HHHHHHHHTTTCCGGGCSEEE
T ss_pred CccHHHHHHHH---HHHHHHHHHcCCCHHHCCEEE
Confidence 35555555543 568899999999999999886
No 368
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=53.57 E-value=35 Score=35.21 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=26.7
Q ss_pred EEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEe
Q psy4650 82 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 118 (381)
Q Consensus 82 ~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~ 118 (381)
.+++..++. .++.+-+.|+++|+|++.++.++.+.
T Consensus 241 vs~~~~~~~--~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 241 ISMIFLSTY--NVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp SCCEEETTT--TEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred EEeeccCCc--cEEEEEeCCCEEEEEECCCCCeEEee
Confidence 344444433 38889999999999999999887764
No 369
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=52.69 E-value=1.7e+02 Score=28.21 Aligned_cols=62 Identities=13% Similarity=0.200 Sum_probs=35.7
Q ss_pred EEEEEcCCC--eEEEEECCCCeEEEE-----eccCCCCEEEEEEecC-CCEEEEEeC--C-----CCEEEEeCCCCe
Q psy4650 94 YLISGADDR--LVKIWDYQNKTCVQT-----LEGHGQNISAVCFHPE-LPIVITGSE--D-----GSVRVWHSGTHR 155 (381)
Q Consensus 94 ~l~s~~~d~--~v~vwd~~~~~~~~~-----~~~~~~~v~~~~~~p~-~~~l~s~~~--d-----~~i~vwd~~~~~ 155 (381)
.++.||.++ .+.+||..+..-... .........++.+... +..++.||. + ..+.+||..+..
T Consensus 503 iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 503 VLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 666666544 688999887753221 1111122233555555 556666665 2 358888988776
No 370
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=52.67 E-value=11 Score=33.00 Aligned_cols=37 Identities=14% Similarity=0.248 Sum_probs=31.8
Q ss_pred eecHHHH-HHHHHHHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 341 NVSRARF-ESLIGGLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 341 ~~~~~~~-e~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.+.++.+ +++++++++++.++++++|+++ .++++.|+
T Consensus 264 ~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~Iv 301 (346)
T 2fsj_A 264 QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTSLI 301 (346)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccEEE
Confidence 3458999 9999999999999999999987 56777765
No 371
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=51.02 E-value=1.2e+02 Score=26.27 Aligned_cols=67 Identities=15% Similarity=0.166 Sum_probs=46.6
Q ss_pred cccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeCCCCE
Q psy4650 78 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSV 146 (381)
Q Consensus 78 ~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~d~~i 146 (381)
.+.-.++..++.-. .+..-..-|.++++|+.++.++..-+-...+|..-+.+....-+......|.|
T Consensus 259 ~DFPVamqvs~kyg--viyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqV 325 (365)
T 2xzh_A 259 NDFPVAMQISEKHD--VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 325 (365)
T ss_dssp TCCEEEEEEETTTT--EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEE
T ss_pred CCceEEEEecccCC--EEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEE
Confidence 45566777776444 67777889999999999999988877777777766655544444444444443
No 372
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=50.40 E-value=15 Score=37.97 Aligned_cols=38 Identities=16% Similarity=0.188 Sum_probs=31.7
Q ss_pred CEEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEe
Q psy4650 124 NISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLT 161 (381)
Q Consensus 124 ~v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 161 (381)
.+.+++..++..++.+-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34556667788899999999999999999999888754
No 373
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=50.04 E-value=14 Score=32.83 Aligned_cols=35 Identities=6% Similarity=0.100 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 346 RFESLIGGLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 346 ~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
+.+........=..+.+++||++||++++|||.||
T Consensus 88 r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId~li 122 (387)
T 3oit_A 88 RLDIAADAVPELAAEAAKKAIAEWGRPAADITHLV 122 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 33333444445556778999999999999999987
No 374
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=49.17 E-value=1.2e+02 Score=25.44 Aligned_cols=102 Identities=11% Similarity=0.091 Sum_probs=46.9
Q ss_pred EEEEEecCCeEEEecCCCccceeeEeeccccc-cEEEEEeeeCCCccEEEEEcC----CC-------eEEEEECCCCeEE
Q psy4650 48 YKISYQESSRVKAFNPIQVATLILKTLYGHEK-GVNCVDYYHGGDKPYLISGAD----DR-------LVKIWDYQNKTCV 115 (381)
Q Consensus 48 ~~~s~~~d~~v~i~~~~~~~~~~~~~l~~h~~-~v~~~~~~~~~~~~~l~s~~~----d~-------~v~vwd~~~~~~~ 115 (381)
+++-|+. .+..||+....-.. ..+..... .-.++.. .++. .++.|+. ++ .+..+|..+..-.
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~-~~~~--lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~ 91 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYL-TALAEQIPRNHSSIVT-QQNQ--VYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWV 91 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEE-EEECTTSCSSEEEEEC-SSSC--EEEEESSCC-------CCCBEEEEEETTTTEEE
T ss_pred hhhcccc--ceEEECCCCCceec-ccCCccCCccceEEEE-ECCE--EEEECCcccCccccCCCccccEEEEeCCCCcEE
Confidence 3444443 47899987543222 22221111 1223332 2333 5666662 11 2667888776532
Q ss_pred EE--eccCCCCEEEEEEecCCCEEEEEeCC-------CCEEEEeCCCCeee
Q psy4650 116 QT--LEGHGQNISAVCFHPELPIVITGSED-------GSVRVWHSGTHRLE 157 (381)
Q Consensus 116 ~~--~~~~~~~v~~~~~~p~~~~l~s~~~d-------~~i~vwd~~~~~~~ 157 (381)
.. +...... .+++. -++...+.||.+ ..+.+||..+.+..
T Consensus 92 ~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 140 (318)
T 2woz_A 92 GLPPLPSARCL-FGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS 140 (318)
T ss_dssp ECSCBSSCBCS-CEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE
T ss_pred ECCCCCccccc-cceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEe
Confidence 21 1111111 12222 256666666653 24778888776544
No 375
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=48.85 E-value=15 Score=32.72 Aligned_cols=36 Identities=8% Similarity=0.128 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 345 ARFESLIGGLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 345 ~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
++.+........=..+.+++||++||++++|||.||
T Consensus 93 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi 128 (393)
T 3ov2_A 93 DRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLV 128 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 333444444555556678999999999999999987
No 376
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=47.20 E-value=33 Score=33.18 Aligned_cols=36 Identities=14% Similarity=0.189 Sum_probs=28.9
Q ss_pred EEEEEEecCCCEEEEEeCCCCEEEEeCCCCeeeEEEec
Q psy4650 125 ISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTY 162 (381)
Q Consensus 125 v~~~~~~p~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 162 (381)
|.++. .+..++++-+.|.++|+|++.+++++.+..-
T Consensus 224 Is~~~--~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKL--FHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEE--ETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEec--cCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 44443 3577999999999999999999998877654
No 377
>3l9k_W Dynein intermediate chain, cytosolic; LC7, light chain 7, KM23, RO hydrolase, alternative splicing, lysosome, membrane; 3.00A {Drosophila melanogaster}
Probab=45.36 E-value=22 Score=19.54 Aligned_cols=17 Identities=24% Similarity=0.192 Sum_probs=15.1
Q ss_pred HHHHHHhHHHHHHHHHh
Q psy4650 352 GGLLTSFVQPIEDVLSR 368 (381)
Q Consensus 352 ~~~~~~~~~~~~~~l~~ 368 (381)
.++|.|.-.++|+||.+
T Consensus 16 ~~F~~rsskviERAL~e 32 (38)
T 3l9k_W 16 QRFVVRAGRVIERALSE 32 (38)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcc
Confidence 57899999999999975
No 378
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=45.02 E-value=1.4e+02 Score=25.32 Aligned_cols=93 Identities=10% Similarity=0.036 Sum_probs=42.2
Q ss_pred ceEEEEEecCCeEEEecCCC--ccceeeEeeccccccEEEEEeeeCCCccEEEEEcC-C---------CeEEEEECCCCe
Q psy4650 46 IEYKISYQESSRVKAFNPIQ--VATLILKTLYGHEKGVNCVDYYHGGDKPYLISGAD-D---------RLVKIWDYQNKT 113 (381)
Q Consensus 46 ~~~~~s~~~d~~v~i~~~~~--~~~~~~~~l~~h~~~v~~~~~~~~~~~~~l~s~~~-d---------~~v~vwd~~~~~ 113 (381)
.-|++.|.....+.+||+.. ..-..+..+.+....-.+++.. ++. +++.|+. + ..+.+||..+..
T Consensus 21 ~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~-~~~--lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 21 TVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI-DGN--LYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp EEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-TTE--EEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred EEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE-CCE--EEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 34555444556788999853 2222222222111111122222 222 5555554 2 467888888765
Q ss_pred EEEE--ec-cCCCCEEEEEEecCCCEEEEEeCC
Q psy4650 114 CVQT--LE-GHGQNISAVCFHPELPIVITGSED 143 (381)
Q Consensus 114 ~~~~--~~-~~~~~v~~~~~~p~~~~l~s~~~d 143 (381)
-... .. .......++. .++..++.||.+
T Consensus 98 W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 98 WVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp EEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred EEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 2221 11 1111112222 466777777754
No 379
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=43.86 E-value=20 Score=31.78 Aligned_cols=29 Identities=7% Similarity=0.045 Sum_probs=23.0
Q ss_pred HHHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 352 GGLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 352 ~~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
+....=..+.++++|++||+++++||.||
T Consensus 96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li 124 (387)
T 3a5r_A 96 KGVAELGKEAALKAIKEWGQPKSKITHLI 124 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCGGGCCEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 34444455678899999999999999886
No 380
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=43.70 E-value=17 Score=32.14 Aligned_cols=25 Identities=12% Similarity=0.226 Sum_probs=21.0
Q ss_pred HHhHHHHHHHHHhCCCCcccccccc
Q psy4650 356 TSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.=..+.+++||++||++++|||.||
T Consensus 83 ~La~~Aa~~aL~~ag~~~~dId~li 107 (379)
T 3euo_A 83 PLAVEASRKAMAEARLVPAQITHMV 107 (379)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3445668899999999999999887
No 381
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=41.84 E-value=22 Score=31.48 Aligned_cols=28 Identities=4% Similarity=-0.032 Sum_probs=22.4
Q ss_pred HHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 353 GLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 353 ~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
....=..+.++++|+++|+++++||.||
T Consensus 101 ~~~~La~~Aa~~aL~~agl~~~~Id~li 128 (389)
T 1i88_A 101 EVPRLGKEAAVKAIKEWGQPKSKITHLI 128 (389)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3344455678899999999999999886
No 382
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=41.55 E-value=23 Score=31.78 Aligned_cols=28 Identities=7% Similarity=0.056 Sum_probs=22.4
Q ss_pred HHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 353 GLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 353 ~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
....=....++++|++||+++++||.||
T Consensus 124 ~~~~La~~Aa~~AL~~agl~~~~Id~li 151 (413)
T 1xes_A 124 EVPRLAKEAAEKAIQEWGQSKSGITHLI 151 (413)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEE
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3344455678899999999999999886
No 383
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=41.47 E-value=23 Score=31.61 Aligned_cols=28 Identities=4% Similarity=0.017 Sum_probs=22.4
Q ss_pred HHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 353 GLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 353 ~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
....=..+.++++|+++|+++++||.||
T Consensus 114 ~~~~La~~Aa~~aL~~agl~~~~Id~vi 141 (402)
T 3awk_A 114 EVPKLAKEAAISAIKQWGQPKSKITHLV 141 (402)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3344455678899999999999999886
No 384
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=41.45 E-value=22 Score=31.79 Aligned_cols=29 Identities=3% Similarity=0.008 Sum_probs=22.9
Q ss_pred HHHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 352 GGLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 352 ~~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.....=..+.++++|+++|+++++||.||
T Consensus 118 ~~~~~La~~Aa~~aL~~agl~~~dId~li 146 (413)
T 2p0u_A 118 AQVPKLAKEASMNAIKEWGRPKSEITHIV 146 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCGGGCCEEE
T ss_pred HHHHHHHHHHHHHHHHHhCcCHHHCCEEE
Confidence 33444455678899999999999999886
No 385
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=39.63 E-value=18 Score=29.41 Aligned_cols=23 Identities=13% Similarity=0.421 Sum_probs=20.1
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.+..++++|+++|++.+|||.|.
T Consensus 38 l~~~i~~~L~~a~~~~~did~Ia 60 (231)
T 2gel_A 38 ILPMVQEILAASGASLNEIDALA 60 (231)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 55678899999999999999874
No 386
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=39.48 E-value=25 Score=31.28 Aligned_cols=28 Identities=7% Similarity=0.112 Sum_probs=22.3
Q ss_pred HHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 353 GLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 353 ~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
....=..+.++++|+++|+++++||.||
T Consensus 106 ~~~~La~~Aa~~aL~~agl~~~~Id~vi 133 (402)
T 1ee0_A 106 GVPMLGKEAAVKAIDEWGLPKSKITHLI 133 (402)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3344455678899999999999999886
No 387
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=38.22 E-value=23 Score=32.33 Aligned_cols=25 Identities=12% Similarity=0.226 Sum_probs=21.3
Q ss_pred HHhHHHHHHHHHhCCCCcccccccc
Q psy4650 356 TSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.=..+.+++||++||++++|||.||
T Consensus 112 ~La~~Aa~~AL~~agi~~~dId~li 136 (465)
T 3e1h_A 112 PLAVEASRKAMAEARLVPAQITHMV 136 (465)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3455678899999999999999987
No 388
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=37.92 E-value=30 Score=29.45 Aligned_cols=26 Identities=15% Similarity=0.424 Sum_probs=21.5
Q ss_pred HHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 355 LTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 355 ~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.......++++|+++|++++|||-|+
T Consensus 217 ~~~~~~~i~~aL~~agl~~~did~v~ 242 (317)
T 1hnj_A 217 VTELAHIVDETLAANNLDRSQLDWLV 242 (317)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 34556778999999999999999775
No 389
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=37.90 E-value=21 Score=28.66 Aligned_cols=24 Identities=13% Similarity=0.414 Sum_probs=20.3
Q ss_pred HhHHHHHHHHHhCCCCcccccccc
Q psy4650 357 SFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 357 ~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
+.+..++++|+++|++.+|||.|.
T Consensus 38 ~L~p~i~~~L~~a~~~~~dld~Ia 61 (213)
T 3r6m_A 38 KVLPMVDEVLKEAGLTLQDLDALA 61 (213)
T ss_dssp HHHHHHHHHHHTTTCCTTTCSEEE
T ss_pred HHHHHHHHHHHHcCCCHHHccEEE
Confidence 445678899999999999999874
No 390
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=37.62 E-value=28 Score=31.02 Aligned_cols=28 Identities=7% Similarity=0.090 Sum_probs=22.3
Q ss_pred HHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 353 GLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 353 ~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
....=....++++|+++|+++++||.||
T Consensus 114 ~~~~La~~Aa~~aL~~ag~~~~~Id~vi 141 (406)
T 2d3m_A 114 GVPALGTEAAVKAIEEWGRPKSEITHLV 141 (406)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGCCEEE
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3344455678899999999999999886
No 391
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=37.59 E-value=5.6 Score=34.79 Aligned_cols=54 Identities=7% Similarity=0.052 Sum_probs=42.4
Q ss_pred cChHHH-HHHHHHHhhhhhhhhHhhhccccceeeEeeccccCcceEEeecHHHHHHHHHHHHH
Q psy4650 295 VSRARF-ESLIGGLLTSFVQPCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLT 356 (381)
Q Consensus 295 itr~~f-e~l~~~l~~~~~~~~~~~Ls~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 356 (381)
++++.+ ++.+.+++.++.++++++|... .+.+...++.||.... +++++++.|.
T Consensus 265 ~~~~~i~~~~i~~~~~~i~~~i~~~l~~~------~~~i~~IvL~GGga~l--l~~~l~~~~~ 319 (346)
T 2fsj_A 265 VGGPEVSGPILEDLANRIIENIRLNLRGE------VDRVTSLIPVGGGSNL--IGDRFEEIAP 319 (346)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHHHHHHGGG------GGGEEEEEEESTTHHH--HGGGGGGGST
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhh------hhcccEEEEECCcHHH--HHHHHHHHCc
Confidence 448999 9999999999999999999764 2345556677887776 7777777774
No 392
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=37.48 E-value=30 Score=30.69 Aligned_cols=28 Identities=7% Similarity=0.068 Sum_probs=22.6
Q ss_pred HHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 353 GLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 353 ~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.......+.++++|+++|++++|||-+|
T Consensus 288 ~a~~~~~~~i~~~L~~~gl~~~dId~~v 315 (392)
T 3led_A 288 EVVPLVSEMIIEHAREIGIDPHGLKRMW 315 (392)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCcEEE
Confidence 3444566679999999999999999765
No 393
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=37.36 E-value=3.7e+02 Score=27.81 Aligned_cols=101 Identities=14% Similarity=0.066 Sum_probs=60.0
Q ss_pred CCeEEEecCCCccceeeEeeccccccEEEEEeeeCCC----ccEEEEEcC-CCeEEEEECCCCeEEEEecc-CCCCEEEE
Q psy4650 55 SSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGD----KPYLISGAD-DRLVKIWDYQNKTCVQTLEG-HGQNISAV 128 (381)
Q Consensus 55 d~~v~i~~~~~~~~~~~~~l~~h~~~v~~~~~~~~~~----~~~l~s~~~-d~~v~vwd~~~~~~~~~~~~-~~~~v~~~ 128 (381)
++.+..+++.+..-..... ..-.+.|.|+++.|.+. ..+++.|.+ |++++++++.+.+.+....- ......++
T Consensus 531 g~~l~~fel~~~~L~~~~~-~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si 609 (1158)
T 3ei3_A 531 GRALYYLQIHPQELRQISH-TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSI 609 (1158)
T ss_dssp TTEEEEEEEETTEEEEEEE-EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEE
T ss_pred CCEEEEEEeeCCceeeecc-cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEE
Confidence 5677777664311111111 12346799999986432 247888886 99999999987765543321 11233444
Q ss_pred EEec--CCCEEEEEeCCCCEEEEe--CCCCee
Q psy4650 129 CFHP--ELPIVITGSEDGSVRVWH--SGTHRL 156 (381)
Q Consensus 129 ~~~p--~~~~l~s~~~d~~i~vwd--~~~~~~ 156 (381)
.+.. ...+|..|-.||.+.-+. ..+|..
T Consensus 610 ~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l 641 (1158)
T 3ei3_A 610 LMTTFESSHYLLCALGDGALFYFGLNIETGLL 641 (1158)
T ss_dssp EEEEETTEEEEEEEETTSEEEEEEECTTTCCE
T ss_pred EEEEeCCCcEEEEEeCCCeEEEEEEcCCCCcc
Confidence 4432 334788898999876554 445544
No 394
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=37.18 E-value=17 Score=31.82 Aligned_cols=23 Identities=9% Similarity=0.268 Sum_probs=19.8
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
....++++|++||+++++||.||
T Consensus 78 a~~Aa~~aL~~agl~~~dId~vi 100 (359)
T 3h78_A 78 MVPAARQAIEAAGLLPEDIDLLL 100 (359)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEE
T ss_pred HHHHHHHHHHhcCCCHHHCCEEE
Confidence 34668899999999999999886
No 395
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=36.76 E-value=32 Score=29.16 Aligned_cols=25 Identities=24% Similarity=0.395 Sum_probs=20.9
Q ss_pred HHhHHHHHHHHHhCCCCcccccccc
Q psy4650 356 TSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
......++++|+++|++++|||-|+
T Consensus 212 ~~~~~~i~~al~~agl~~~did~~~ 236 (313)
T 1zow_A 212 RIMGDASTRVVEKANLTSDDIDLFI 236 (313)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3555678999999999999999775
No 396
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=35.68 E-value=33 Score=29.57 Aligned_cols=25 Identities=16% Similarity=0.299 Sum_probs=21.0
Q ss_pred HHhHHHHHHHHHhCCCCcccccccc
Q psy4650 356 TSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
......++++|+++|++++|||-|+
T Consensus 231 ~~~~~~i~~aL~~agl~~~did~v~ 255 (339)
T 1mzj_A 231 ADVVPAAREALEVAGLTVGDLVAFV 255 (339)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 4455678999999999999999775
No 397
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=35.67 E-value=29 Score=30.02 Aligned_cols=26 Identities=15% Similarity=0.188 Sum_probs=21.8
Q ss_pred HHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 355 LTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 355 ~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
-+.....++++|++||++.+|||.|.
T Consensus 53 ~~~l~~~i~~~L~~ag~~~~did~Ia 78 (334)
T 3eno_A 53 SEVIDTVISRALEKAKISIHDIDLIG 78 (334)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 34556779999999999999999874
No 398
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=35.63 E-value=19 Score=31.33 Aligned_cols=23 Identities=13% Similarity=0.293 Sum_probs=20.0
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+..+++|+++|++++|||-||
T Consensus 66 a~~Aa~~aL~~ag~~~~dId~li 88 (350)
T 4ewp_A 66 AVGAAREALERAGLQGSDLDAVI 88 (350)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 34678899999999999999886
No 399
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=35.51 E-value=16 Score=31.51 Aligned_cols=23 Identities=9% Similarity=0.179 Sum_probs=19.8
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+.++++|+++|+++++||.||
T Consensus 62 a~~Aa~~aL~~ag~~~~~Id~vi 84 (323)
T 3il3_A 62 GFEAAKNAIEAAQINPQDIELII 84 (323)
T ss_dssp HHHHHHHHHHHHCCCGGGCCEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 44567899999999999999887
No 400
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=35.23 E-value=29 Score=29.67 Aligned_cols=26 Identities=12% Similarity=0.308 Sum_probs=21.4
Q ss_pred HHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 355 LTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 355 ~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.......++++|+++|++++|||-|+
T Consensus 219 ~~~~~~~i~~al~~agl~~~did~~~ 244 (322)
T 1ub7_A 219 VRVMNTATLEAIEKAGLTPEDIRLFV 244 (322)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 34555678999999999999999775
No 401
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=33.98 E-value=19 Score=31.56 Aligned_cols=23 Identities=9% Similarity=0.205 Sum_probs=19.7
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+.++++|++||+++++||.||
T Consensus 58 a~~Aa~~aL~~ag~~~~dId~vi 80 (357)
T 3s3l_A 58 AARAARAALGRGDVDPADVSLVL 80 (357)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 34567889999999999999987
No 402
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=33.95 E-value=31 Score=29.66 Aligned_cols=25 Identities=16% Similarity=0.337 Sum_probs=20.8
Q ss_pred HHhHHHHHHHHHhCCCCcccccccc
Q psy4650 356 TSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
......++++|+++|++++|||-|+
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~ 248 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLV 248 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 4455678999999999999999775
No 403
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=33.87 E-value=20 Score=31.44 Aligned_cols=23 Identities=9% Similarity=0.224 Sum_probs=19.9
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
....++++|++||+++++||.||
T Consensus 84 a~~Aa~~aL~~ag~~~~~Id~vi 106 (365)
T 3gwa_A 84 AYEAARKLFAQGAVGADQVDFVI 106 (365)
T ss_dssp HHHHHHHHHHTTSCCGGGCCEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 44668899999999999999886
No 404
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=33.75 E-value=2.1e+02 Score=23.99 Aligned_cols=89 Identities=7% Similarity=0.003 Sum_probs=50.5
Q ss_pred EeeeCCCccEEEEE----cCCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEEEEeC-CCCEEEEeCCCCeeeEE
Q psy4650 85 DYYHGGDKPYLISG----ADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSE-DGSVRVWHSGTHRLEIS 159 (381)
Q Consensus 85 ~~~~~~~~~~l~s~----~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s~~~-d~~i~vwd~~~~~~~~~ 159 (381)
.|+++++ .|+-. .....|...++..... ..+..+.. .+++|++..|.-.+. ...|.+-++.++.....
T Consensus 110 ~~s~~g~--~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l 182 (302)
T 3s25_A 110 YASLIGN--YIYYLHYDTQTATSLYRIRIDGEEK-KKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALF 182 (302)
T ss_dssp EEEEETT--EEEEEEESSSSCEEEEEEETTSCCC-EEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEE
T ss_pred EEEEeCC--EEEEEeecCCCCceEEEEECCCCCe-EEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEE
Confidence 6777777 34433 2345566666664443 33333322 456788887775554 67888888877665433
Q ss_pred EecCCcceEEEEEcCCCCEEEEEeC
Q psy4650 160 LTYGLERVWTISSLKGSNNVAIGYD 184 (381)
Q Consensus 160 ~~~~~~~v~~v~~~~~~~~l~~~~~ 184 (381)
+.+ ... ..++|++.+++-...
T Consensus 183 ~~~---~~~-~~~~P~g~~iy~t~~ 203 (302)
T 3s25_A 183 YDC---NCY-KPVVLDDTNVYYMDV 203 (302)
T ss_dssp ECS---CEE-EEEEEETTEEEEEEG
T ss_pred eCC---Ccc-ceeeecCCEEEEEEc
Confidence 332 222 235577777766543
No 405
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=33.58 E-value=37 Score=29.95 Aligned_cols=26 Identities=12% Similarity=0.178 Sum_probs=21.4
Q ss_pred HHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 355 LTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 355 ~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..=....++++|++||+++++||.||
T Consensus 85 ~~la~~Aa~~aL~~agl~~~~id~vi 110 (382)
T 1u0m_A 85 KSRVPAVIQRALDDAELLATDIDVII 110 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCEEE
Confidence 33455678899999999999999876
No 406
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=33.56 E-value=31 Score=30.31 Aligned_cols=27 Identities=11% Similarity=-0.039 Sum_probs=22.0
Q ss_pred HHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 354 LLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 354 ~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
...=..+.++++|++||+++++||.||
T Consensus 95 ~~~la~~Aa~~al~~ag~~~~~id~vi 121 (374)
T 2h84_A 95 VPDLAQQACLRALKDWGGDKGDITHIV 121 (374)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCCEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 334455678999999999999999886
No 407
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=33.36 E-value=77 Score=30.67 Aligned_cols=27 Identities=33% Similarity=0.545 Sum_probs=23.5
Q ss_pred cEEEEEcCCCeEEEEECCCCeEEEEec
Q psy4650 93 PYLISGADDRLVKIWDYQNKTCVQTLE 119 (381)
Q Consensus 93 ~~l~s~~~d~~v~vwd~~~~~~~~~~~ 119 (381)
.++++-+.|+++|+|++.++.++.+..
T Consensus 232 ~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 232 RYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp TEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 389999999999999999998776653
No 408
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=33.29 E-value=18 Score=31.11 Aligned_cols=23 Identities=17% Similarity=0.185 Sum_probs=19.9
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
....++++|++||+++++||.||
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li 78 (321)
T 3il6_A 56 CHQVAKQLLEKSGKQASEIDFIL 78 (321)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 44568899999999999999886
No 409
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=33.24 E-value=40 Score=29.03 Aligned_cols=25 Identities=16% Similarity=0.324 Sum_probs=20.8
Q ss_pred HHhHHHHHHHHHhCCCCcccccccc
Q psy4650 356 TSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
+...+.++++|+++|++++|||-++
T Consensus 234 ~~~~~~i~~~l~~~gl~~~did~~~ 258 (333)
T 4dfe_A 234 NVLEKVAVEALEKANLSAEQIDWLI 258 (333)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 4455678999999999999999765
No 410
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=33.23 E-value=18 Score=31.27 Aligned_cols=23 Identities=9% Similarity=0.148 Sum_probs=19.9
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+.++++|++||+++++||.||
T Consensus 69 a~~Aa~~al~~ag~~~~~Id~vi 91 (333)
T 4dfe_A 69 AFIASQRAIEAADIDPQSIDLII 91 (333)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 44678899999999999999886
No 411
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=32.92 E-value=40 Score=29.44 Aligned_cols=25 Identities=20% Similarity=0.388 Sum_probs=21.0
Q ss_pred HHhHHHHHHHHHhCCCCcccccccc
Q psy4650 356 TSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
+...+.++++|+++|++++|||-+|
T Consensus 254 ~~~~~~i~~~L~~~gl~~~did~~v 278 (359)
T 3h78_A 254 QTLVRIAGEMLAAHELTLDDIDHVI 278 (359)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 4455678999999999999999775
No 412
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=32.73 E-value=33 Score=28.98 Aligned_cols=26 Identities=12% Similarity=0.323 Sum_probs=21.3
Q ss_pred HHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 355 LTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 355 ~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.......++++|+++|++++|||-|+
T Consensus 209 ~~~~~~~i~~al~~agl~~~did~~~ 234 (309)
T 2ebd_A 209 VRSMEEVCREVLEKAGVKPEEVSLVI 234 (309)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 34555678999999999999999765
No 413
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=32.67 E-value=2.8e+02 Score=25.06 Aligned_cols=109 Identities=13% Similarity=0.102 Sum_probs=58.4
Q ss_pred hcceeeeecCCCc-eEEEEEecCCeEEEecCCCcc-ceeeEeec-----c----ccccEEEEEeeeC--CCccEEEEEc-
Q psy4650 34 ETKVDITTNKDMI-EYKISYQESSRVKAFNPIQVA-TLILKTLY-----G----HEKGVNCVDYYHG--GDKPYLISGA- 99 (381)
Q Consensus 34 ~~~~~i~~~~~~~-~~~~s~~~d~~v~i~~~~~~~-~~~~~~l~-----~----h~~~v~~~~~~~~--~~~~~l~s~~- 99 (381)
..|..+.+.+++. .++++ ...|.|++++..... ...+..+. + ..+....++|+|+ .+..+.++-+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~-er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFIL-EKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEEE-ETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEE-eCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 4678888888865 45554 667999999764211 11222221 1 2457889999985 1111223222
Q ss_pred -CC----------CeEEEEECCC----------CeEEEEec--cCCCCEEEEEEecCCCEEEEEeCC
Q psy4650 100 -DD----------RLVKIWDYQN----------KTCVQTLE--GHGQNISAVCFHPELPIVITGSED 143 (381)
Q Consensus 100 -~d----------~~v~vwd~~~----------~~~~~~~~--~~~~~v~~~~~~p~~~~l~s~~~d 143 (381)
.+ ..|.-|.+.. .+.+..+. ........+.|.|+|.+.++.+..
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 11 1333344432 12333332 112245899999999866665543
No 414
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=32.57 E-value=1.8e+02 Score=27.48 Aligned_cols=57 Identities=14% Similarity=0.022 Sum_probs=38.5
Q ss_pred EEEEEecCCCEEEEEeCC------------CCEEEEeCCCCeeeEEEec-CCcceEEEEEcCCCCEEEEE
Q psy4650 126 SAVCFHPELPIVITGSED------------GSVRVWHSGTHRLEISLTY-GLERVWTISSLKGSNNVAIG 182 (381)
Q Consensus 126 ~~~~~~p~~~~l~s~~~d------------~~i~vwd~~~~~~~~~~~~-~~~~v~~v~~~~~~~~l~~~ 182 (381)
-.|.|+|.|.+++.-..+ ..+.+.+..+++...-+.+ ....++.++|+|+++.|.+.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 568999999866654322 2355566667766555544 34678999999998877654
No 415
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=32.51 E-value=19 Score=31.36 Aligned_cols=23 Identities=22% Similarity=0.238 Sum_probs=19.9
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+.++++|++||+++++||.||
T Consensus 72 a~~Aa~~al~~ag~~~~~Id~vi 94 (345)
T 3s21_A 72 ATQAARKALIDANIGIEKIGLLI 94 (345)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 44668899999999999999886
No 416
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=32.40 E-value=19 Score=31.51 Aligned_cols=23 Identities=17% Similarity=0.180 Sum_probs=19.9
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
....++++|++||+++++||.||
T Consensus 70 a~~Aa~~aL~~agi~~~~Id~vi 92 (354)
T 4efi_A 70 CRKAGEKLLAGLGWQADSIDALI 92 (354)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 44667899999999999999886
No 417
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=32.30 E-value=19 Score=32.33 Aligned_cols=27 Identities=4% Similarity=0.027 Sum_probs=22.2
Q ss_pred HHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 354 LLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 354 ~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
...=..+.+++||++||++++|||.||
T Consensus 137 ~~~La~~Aa~~AL~~agi~~~dId~li 163 (413)
T 3v7i_A 137 VQAYGERAARGALQIAGLDVADVDCLI 163 (413)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHHHHHhCcCHHHCCEEE
Confidence 334455678999999999999999987
No 418
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=31.87 E-value=30 Score=30.24 Aligned_cols=26 Identities=12% Similarity=0.179 Sum_probs=22.2
Q ss_pred HHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 355 LTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 355 ~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.+...+.++++|+++|++++|||-+|
T Consensus 237 ~~~~~~~i~~~L~~~gl~~~did~~v 262 (357)
T 3s3l_A 237 IDLLVAAKTQALEDAGTAIEDIAHAV 262 (357)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 34566779999999999999999876
No 419
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=31.48 E-value=44 Score=28.68 Aligned_cols=25 Identities=12% Similarity=0.316 Sum_probs=20.7
Q ss_pred HHhHHHHHHHHHhCCCCcccccccc
Q psy4650 356 TSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
+...+.++++|+++|++++|||-++
T Consensus 224 ~~~~~~i~~~l~~~gl~~~did~~v 248 (323)
T 3il3_A 224 RELSNVVEETLLANNLDKKDLDWLV 248 (323)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCCEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3445678899999999999999765
No 420
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=31.30 E-value=20 Score=30.39 Aligned_cols=25 Identities=12% Similarity=0.276 Sum_probs=20.7
Q ss_pred HHhHHHHHHHHHhCCCCcccccccc
Q psy4650 356 TSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.-..+.++++|++||+++++||.|+
T Consensus 52 ~l~~~a~~~al~~ag~~~~~id~v~ 76 (309)
T 2ebd_A 52 YMATQAAKEALREANLSPEELDLII 76 (309)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3345678899999999999999876
No 421
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=31.26 E-value=36 Score=29.82 Aligned_cols=26 Identities=15% Similarity=0.316 Sum_probs=21.5
Q ss_pred HHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 355 LTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 355 ~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.+...+.++++|+++|++++|||-+|
T Consensus 265 ~~~~~~~i~~~L~~~gl~~~did~~v 290 (365)
T 3gwa_A 265 LAEVPRAADRLLALAGEPRENIDCFV 290 (365)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 34555678999999999999999875
No 422
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=31.25 E-value=24 Score=28.43 Aligned_cols=26 Identities=4% Similarity=0.130 Sum_probs=21.5
Q ss_pred HHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 355 LTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 355 ~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
-++.+..++++|++++++.+|||.|.
T Consensus 46 se~L~p~i~~~L~~a~~~~~dld~Ia 71 (218)
T 2a6a_A 46 AEILPVVVKKLLDELDLKVKDLDVVG 71 (218)
T ss_dssp GGHHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 34556678999999999999999874
No 423
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=30.24 E-value=19 Score=32.04 Aligned_cols=23 Identities=17% Similarity=0.228 Sum_probs=19.9
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
....+++||++||++++|||.||
T Consensus 121 a~~Aa~~AL~~agi~~~dId~vi 143 (392)
T 3led_A 121 AVTAAEQAIERWGKPRERIGAVL 143 (392)
T ss_dssp HHHHHHHHHHHHCSCGGGEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 34568899999999999999886
No 424
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=30.07 E-value=22 Score=30.27 Aligned_cols=23 Identities=9% Similarity=0.180 Sum_probs=19.8
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
....++++|++||+++++||.|+
T Consensus 55 ~~~a~~~al~~ag~~~~~id~vi 77 (313)
T 1zow_A 55 AYEASVKAIADAGIQPEDIDMII 77 (313)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 45668899999999999999876
No 425
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=29.78 E-value=44 Score=29.54 Aligned_cols=24 Identities=13% Similarity=0.036 Sum_probs=20.5
Q ss_pred HhHHHHHHHHHhCCCCcccccccc
Q psy4650 357 SFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 357 ~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
=....++++|++||+++++||.||
T Consensus 116 la~~Aa~~aL~~agl~~~~Id~vi 139 (393)
T 1ted_A 116 LAVDVSKRALAGLPYRAAEIGLLV 139 (393)
T ss_dssp HHHHHHHHHHTTCCCCGGGEEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEE
Confidence 345668899999999999999886
No 426
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=29.49 E-value=41 Score=29.14 Aligned_cols=25 Identities=4% Similarity=0.053 Sum_probs=20.7
Q ss_pred HHhHHHHHHHHHhCCCCcccccccc
Q psy4650 356 TSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
+...+.++++|+++|++++|||-++
T Consensus 246 ~~~~~~i~~~l~~~gl~~~did~~v 270 (345)
T 3s21_A 246 KLAQKTFVAAKQVLGWAVEELDQFV 270 (345)
T ss_dssp HHHHHHHHHHHHHHCCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 4455668899999999999999775
No 427
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=29.14 E-value=25 Score=30.04 Aligned_cols=23 Identities=17% Similarity=0.299 Sum_probs=19.8
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
....++++|++||+++++||.|+
T Consensus 54 a~~a~~~al~~ag~~~~~id~vi 76 (322)
T 1ub7_A 54 AFKAVEDLLRRHPGALEGVDAVI 76 (322)
T ss_dssp HHHHHHHHHHHSTTTTTTEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 45668899999999999999876
No 428
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=29.00 E-value=23 Score=30.17 Aligned_cols=23 Identities=17% Similarity=0.202 Sum_probs=19.8
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+.++++|++||+++++||.|+
T Consensus 55 ~~~a~~~al~~ag~~~~~id~vi 77 (317)
T 1hnj_A 55 GFEAATRAIEMAGIEKDQIGLIV 77 (317)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 45668899999999999999875
No 429
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=28.80 E-value=24 Score=31.64 Aligned_cols=23 Identities=17% Similarity=0.323 Sum_probs=19.7
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+.++++|++||+++++||.|+
T Consensus 59 ~~~Aa~~AL~dAgl~~~~id~v~ 81 (418)
T 2iik_A 59 LSAVMTAVLKDVNLRPEQLGDIC 81 (418)
T ss_dssp HHHHHHHHHHHHTCCGGGCCCEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 34567899999999999999886
No 430
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=27.85 E-value=36 Score=29.53 Aligned_cols=27 Identities=11% Similarity=0.279 Sum_probs=21.8
Q ss_pred HHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 354 LLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 354 ~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
......+.++++|+++|++++|||-++
T Consensus 247 a~~~~~~~i~~~L~~~gl~~~did~~v 273 (350)
T 4ewp_A 247 AVWSMAKVAREALDAAGVEPEDLAAFI 273 (350)
T ss_dssp HHHTHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred HHHhhhHHHHHHHHhhcCChhHhceEE
Confidence 334555678999999999999999775
No 431
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=27.45 E-value=26 Score=30.18 Aligned_cols=23 Identities=13% Similarity=0.226 Sum_probs=19.7
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
..+.++++|++||+++++||.|+
T Consensus 65 a~~A~~~al~~ag~~~~~id~vi 87 (335)
T 1u6e_A 65 ATEACRRALSNAGLSAADIDGVI 87 (335)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 45667899999999999999876
No 432
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=27.40 E-value=46 Score=28.95 Aligned_cols=26 Identities=15% Similarity=0.253 Sum_probs=21.2
Q ss_pred HHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 355 LTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 355 ~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.+...+.++++|+++|++++|||-++
T Consensus 243 ~~~~~~~i~~~l~~~gl~~~did~~v 268 (354)
T 4efi_A 243 LNAVPKLVSRTLDIAGRDKDSYDAFL 268 (354)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 34455678899999999999999875
No 433
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=27.34 E-value=3.6e+02 Score=24.56 Aligned_cols=59 Identities=14% Similarity=0.145 Sum_probs=42.7
Q ss_pred cccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCeEEEEeccCCCCEEEEEEecCCCEEE
Q psy4650 78 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVI 138 (381)
Q Consensus 78 ~~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~ 138 (381)
.+.-.++..++.-. .+..-..-|.+.++|+.++.++..-+-...+|..-+.+....-+.
T Consensus 258 ~DFPvamqvs~kyg--viyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~ 316 (494)
T 1bpo_A 258 NDFPVAMQISEKHD--VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGII 316 (494)
T ss_dssp TCCEEEEEEETTTT--EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEE
T ss_pred cCceeEEEecccCC--EEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEE
Confidence 45567777777544 677778899999999999999888776667776655554443333
No 434
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=26.95 E-value=50 Score=28.43 Aligned_cols=28 Identities=14% Similarity=0.203 Sum_probs=22.8
Q ss_pred HHHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 353 GLLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 353 ~~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.--+.....++++|+++|++.+|||.|.
T Consensus 46 ~h~~~l~~~i~~~L~~agi~~~did~Ia 73 (330)
T 2ivn_A 46 HHARLMKPLLRKALSEAGVSLDDIDVIA 73 (330)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCcEEE
Confidence 3444556779999999999999999874
No 435
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=26.93 E-value=26 Score=30.21 Aligned_cols=23 Identities=13% Similarity=0.156 Sum_probs=19.9
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
....++++|++||+++++||.||
T Consensus 64 a~~Aa~~al~~ag~~~~~id~vi 86 (339)
T 1mzj_A 64 GVAASRRALEHAGVDPAEIDLVV 86 (339)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 45678899999999999999876
No 436
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=26.91 E-value=24 Score=30.65 Aligned_cols=25 Identities=20% Similarity=0.167 Sum_probs=21.6
Q ss_pred HhHHHHHHHHHhCCCCccccccccC
Q psy4650 357 SFVQPIEDVLSRSNITHDQINKFTT 381 (381)
Q Consensus 357 ~~~~~~~~~l~~~~~~~~~i~~v~~ 381 (381)
...+.+++.|+|+|++++|+|-|+|
T Consensus 208 aA~~ti~~~l~d~g~~~~d~D~ivt 232 (347)
T 3lma_A 208 AAADTIKQHLEDLGRTPDDYDLILT 232 (347)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEec
Confidence 3557789999999999999999874
No 437
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=26.47 E-value=3.8e+02 Score=25.20 Aligned_cols=60 Identities=12% Similarity=0.010 Sum_probs=40.3
Q ss_pred CEEEEEEecCCCEEEEEeC------------CCCEEEEeCCCCeeeEEEecC-CcceEEEEEcCCCCEEEEEe
Q psy4650 124 NISAVCFHPELPIVITGSE------------DGSVRVWHSGTHRLEISLTYG-LERVWTISSLKGSNNVAIGY 183 (381)
Q Consensus 124 ~v~~~~~~p~~~~l~s~~~------------d~~i~vwd~~~~~~~~~~~~~-~~~v~~v~~~~~~~~l~~~~ 183 (381)
....|.|.++|.+.+.... ...+..++..+|+...-+... ...++.++|+|+++.|.++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3467899999987763321 124666677677765555432 35789999999998776653
No 438
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=26.28 E-value=17 Score=33.74 Aligned_cols=23 Identities=9% Similarity=0.141 Sum_probs=20.1
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
....++.+|+|||+++++||++|
T Consensus 46 ~a~Ai~~AL~dAGl~p~~Vd~vI 68 (520)
T 4egv_A 46 ATEAAKAALHDCGADADTVARAI 68 (520)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHC
T ss_pred HHHHHHHHHHHhCcCHHHcceEE
Confidence 34678899999999999999886
No 439
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=25.88 E-value=51 Score=29.16 Aligned_cols=25 Identities=8% Similarity=0.260 Sum_probs=20.7
Q ss_pred HHhHHHHHHHHHhCCCCcccccccc
Q psy4650 356 TSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
......++++|+++|++++|||-|+
T Consensus 287 ~~~~~~i~~aL~~agl~~~dId~~~ 311 (393)
T 1ted_A 287 SGVAPVVTEMLWDNGLQISDIDLWA 311 (393)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSCEE
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEE
Confidence 3445578999999999999999775
No 440
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=25.39 E-value=3.8e+02 Score=24.20 Aligned_cols=107 Identities=13% Similarity=0.047 Sum_probs=59.5
Q ss_pred ccEEEEEeeeCCCccEEEEEcCCCeEEEEECCCCe---EEEEec-----c----CCCCEEEEEEecC----CCE-EEEEe
Q psy4650 79 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT---CVQTLE-----G----HGQNISAVCFHPE----LPI-VITGS 141 (381)
Q Consensus 79 ~~v~~~~~~~~~~~~~l~s~~~d~~v~vwd~~~~~---~~~~~~-----~----~~~~v~~~~~~p~----~~~-l~s~~ 141 (381)
..-..|+|.|+++.+++++ ...|.|++++..... .+..+. + .......++++|+ +.+ ++...
T Consensus 14 ~~P~~~a~~pdG~~rl~V~-er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFIL-EKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEEE-ETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEE-eCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 4557889999886335544 568999999754321 222221 1 1356789999996 333 33222
Q ss_pred C-C----------CCEEEEeCCC----------CeeeEEEe--cCCcceEEEEEcCCCCEEEEEeCCC
Q psy4650 142 E-D----------GSVRVWHSGT----------HRLEISLT--YGLERVWTISSLKGSNNVAIGYDEG 186 (381)
Q Consensus 142 ~-d----------~~i~vwd~~~----------~~~~~~~~--~~~~~v~~v~~~~~~~~l~~~~~dg 186 (381)
. + ..|.-|.+.. .+.+..+. .....-..+.|.|+|.+.++.++.+
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 1 1333455432 12333332 2233467899999998766655543
No 441
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=24.76 E-value=60 Score=26.68 Aligned_cols=28 Identities=4% Similarity=0.208 Sum_probs=25.8
Q ss_pred cHHHHHHHHHHHHHHhHHHHHHHHHhCC
Q psy4650 343 SRARFESLIGGLLTSFVQPIEDVLSRSN 370 (381)
Q Consensus 343 ~~~~~e~~~~~~~~~~~~~~~~~l~~~~ 370 (381)
++..|++++.+++.++.+.+.++|+..+
T Consensus 198 ~~~~~~~~~~~~~~~i~~~i~~~l~~~~ 225 (272)
T 3h1q_A 198 RHREIMRVVRPVIEKMALIVKEVIKNYD 225 (272)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6889999999999999999999999875
No 442
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=24.34 E-value=57 Score=27.92 Aligned_cols=25 Identities=16% Similarity=0.214 Sum_probs=20.8
Q ss_pred HHhHHHHHHHHHhCCCCcccccccc
Q psy4650 356 TSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 356 ~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
......++++|+++|++++|||-|+
T Consensus 232 ~~~~~~i~~al~~agl~~~dId~~~ 256 (335)
T 1u6e_A 232 FKMGDVGRRAMDAAGVRPDQIDVFV 256 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3555678999999999999999765
No 443
>3ljb_A Interferon-induced GTP-binding protein MX1; four-helix-bundle, antiviral protein; 2.40A {Homo sapiens}
Probab=24.01 E-value=36 Score=28.42 Aligned_cols=83 Identities=13% Similarity=0.116 Sum_probs=47.1
Q ss_pred cCCcccccccChHHHHHHHHHHhhhhhhhhHhhhccccceeeE-eeccccCcceEEeecHHHHHHHHHHHHHHhHHHHHH
Q psy4650 286 YDGLDFHHNVSRARFESLIGGLLTSFVQPCMHVLSTLQSSNVF-VESLYDGLDFHHNVSRARFESLIGGLLTSFVQPIED 364 (381)
Q Consensus 286 ~~g~~~~~~itr~~fe~l~~~l~~~~~~~~~~~Ls~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 364 (381)
|.|..+...++=..||.+..+.+++..+|+-+++......-.. +..+.....-+..-=+..+.+.+.+++.+...|.++
T Consensus 75 ~rGrELPgFv~y~aFE~lVk~qI~~LeePAl~cl~~V~e~l~~~~~~i~~~~F~rFpnL~~~i~~~i~~i~~~~~~~Ae~ 154 (271)
T 3ljb_A 75 YRGRELPGFVNYRTFETIVKQQIKALEEPAVDMLHTVTDMVRLAFTDVSIKNFEEFFNLHRTAKSKIEDIRAEQEREGEK 154 (271)
T ss_dssp --------CTTHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcccCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788888889999999999999999999999998764211000 000000000122233446667777777777777777
Q ss_pred HHHh
Q psy4650 365 VLSR 368 (381)
Q Consensus 365 ~l~~ 368 (381)
.+++
T Consensus 155 ~I~~ 158 (271)
T 3ljb_A 155 LIRL 158 (271)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 444
>1avo_A 11S regulator; proteasome activator, cell adhesion, interferon induction; 2.80A {Homo sapiens} SCOP: a.24.8.1
Probab=23.79 E-value=74 Score=19.46 Aligned_cols=34 Identities=12% Similarity=0.403 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhCCCCccccccc
Q psy4650 346 RFESLIGGLLTSFVQPIEDVLSRSNITHDQINKF 379 (381)
Q Consensus 346 ~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~v 379 (381)
+=|+++...|.+-+--++..|++-.++..++.+|
T Consensus 21 eAE~ll~~~fP~KI~eln~LL~~~~f~~~dls~l 54 (60)
T 1avo_A 21 KTENLLGSYFPKKISELDAFLKEPALNEANLSNL 54 (60)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHSGGGCCSCTTSS
T ss_pred HHHHHHHHhCcHHHHHHHHHHcccccccccHHHh
Confidence 4567777788777788889999878888777765
No 445
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=23.76 E-value=58 Score=28.84 Aligned_cols=27 Identities=15% Similarity=0.233 Sum_probs=22.1
Q ss_pred HHHHhHHHHHHHHHhCCCCcccccccc
Q psy4650 354 LLTSFVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 354 ~~~~~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
.++.....++++|+++|++++|||-|+
T Consensus 205 ~~~~~~~~~~~~L~~agl~~~did~~~ 231 (396)
T 1xpm_A 205 YIRSFQQSWNEYAKRQGKSLADFASLC 231 (396)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 445566678999999999999999775
No 446
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=23.00 E-value=36 Score=30.80 Aligned_cols=23 Identities=4% Similarity=0.367 Sum_probs=19.7
Q ss_pred hHHHHHHHHHhCCCCcccccccc
Q psy4650 358 FVQPIEDVLSRSNITHDQINKFT 380 (381)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~i~~v~ 380 (381)
....+.++|++||+++++||.|+
T Consensus 59 a~~Aa~~AL~dAGl~~~~Id~vi 81 (442)
T 2wu9_A 59 LAPVLRALIEKTNLNPSEVGDIV 81 (442)
T ss_dssp HHHHHHHHHHHHTCCGGGCCCEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 44667899999999999999876
No 447
>3k12_A Uncharacterized protein A6V7T0; structural genomics, unknown function, PSI-2, protein struct initiative; 1.49A {Pseudomonas aeruginosa}
Probab=21.20 E-value=93 Score=22.10 Aligned_cols=27 Identities=15% Similarity=0.213 Sum_probs=20.8
Q ss_pred HHHHHHHhHHHHHHHHHhCCCCccccc
Q psy4650 351 IGGLLTSFVQPIEDVLSRSNITHDQIN 377 (381)
Q Consensus 351 ~~~~~~~~~~~~~~~l~~~~~~~~~i~ 377 (381)
+++-...++..++.+|+.+|.+.++|=
T Consensus 35 ~~~Q~~~~l~ni~~~L~~aG~~~~~Vv 61 (122)
T 3k12_A 35 IQDQTRQILENIDRLLQSVGSDRGQVL 61 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHEE
Confidence 345556777788999999999988763
No 448
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=20.90 E-value=79 Score=22.90 Aligned_cols=29 Identities=21% Similarity=0.354 Sum_probs=23.6
Q ss_pred EeecHHHHHHHHHHHHHHhHHHHHHHHHh
Q psy4650 340 HNVSRARFESLIGGLLTSFVQPIEDVLSR 368 (381)
Q Consensus 340 ~~~~~~~~e~~~~~~~~~~~~~~~~~l~~ 368 (381)
.+++-.+|.+++.+.+..+.+.++++..+
T Consensus 7 ~~m~e~ef~~lad~~L~~ie~~le~~~d~ 35 (129)
T 3t3l_A 7 GSLDETTYERLAEETLDSLAEFFEDLADK 35 (129)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 47888999999999999999988887654
No 449
>2ewc_A Conserved hypothetical protein; YJGF proteins family, COG025 putative translation initiation inhibitor; 2.15A {Streptococcus pyogenes} SCOP: d.79.1.1
Probab=20.78 E-value=93 Score=22.28 Aligned_cols=27 Identities=19% Similarity=0.234 Sum_probs=21.1
Q ss_pred HHHHHHHhHHHHHHHHHhCCCCccccc
Q psy4650 351 IGGLLTSFVQPIEDVLSRSNITHDQIN 377 (381)
Q Consensus 351 ~~~~~~~~~~~~~~~l~~~~~~~~~i~ 377 (381)
+++-..+++..++++|+++|.+.++|=
T Consensus 38 ~~~Q~~~~l~ni~~~L~~aG~~l~~Vv 64 (126)
T 2ewc_A 38 IESQINGAFDEMERRLALVGLTLDAVV 64 (126)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCGGGEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHEE
Confidence 345556777888999999999988763
No 450
>1qu9_A YJGF protein; structural genomics; HET: CSP; 1.20A {Escherichia coli} SCOP: d.79.1.1 PDB: 1j7h_A 2uyk_A 2uyj_A 2uyn_A* 2uyp_A
Probab=20.43 E-value=97 Score=22.17 Aligned_cols=26 Identities=4% Similarity=0.142 Sum_probs=20.2
Q ss_pred HHHHHHhHHHHHHHHHhCCCCccccc
Q psy4650 352 GGLLTSFVQPIEDVLSRSNITHDQIN 377 (381)
Q Consensus 352 ~~~~~~~~~~~~~~l~~~~~~~~~i~ 377 (381)
.+-...++..++.+|+++|.+.++|=
T Consensus 47 ~~Q~~~~l~ni~~~L~~ag~~~~~vv 72 (128)
T 1qu9_A 47 AAQARQSLDNVKAIVEAAGLKVGDIV 72 (128)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEE
Confidence 44556677778999999999988764
No 451
>3kjj_A NMB1025 protein; YJGF protein family, OPPF, structural genomics, oxford protein production facility, UN function; 1.90A {Neisseria meningitidis serogroup B} PDB: 3kjk_A
Probab=20.05 E-value=1e+02 Score=22.18 Aligned_cols=26 Identities=8% Similarity=0.118 Sum_probs=20.1
Q ss_pred HHHHHHhHHHHHHHHHhCCCCccccc
Q psy4650 352 GGLLTSFVQPIEDVLSRSNITHDQIN 377 (381)
Q Consensus 352 ~~~~~~~~~~~~~~l~~~~~~~~~i~ 377 (381)
++-...++..++.+|+++|.+.++|=
T Consensus 44 ~~Q~~~~l~nl~~~L~~aG~~l~~Vv 69 (128)
T 3kjj_A 44 AEQTADVLAQIDRWLAECGSDKAHVL 69 (128)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEE
Confidence 44456677778999999999988763
Done!