RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4650
(381 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 87.9 bits (216), Expect = 4e-20
Identities = 33/79 (41%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
L TL GH+ V V ++ GG +++S ADD+ +++WDY+NK C++TL H ++++ F
Sbjct: 240 LMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDF 297
Query: 131 HPELPIVITGSEDGSVRVW 149
H P V+TGS D +V+VW
Sbjct: 298 HKTAPYVVTGSVDQTVKVW 316
Score = 78.2 bits (191), Expect = 9e-17
Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 18/138 (13%)
Query: 71 LKTLYGHEKGVNCVDYYHGG------------------DKPYLISGADDRLVKIWDYQNK 112
L H V C+ + P+L+SG+ D+ +K+WD
Sbjct: 178 KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 237
Query: 113 TCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISS 172
C+ TL GH + V FH +++ ++D ++RVW R +L V ++
Sbjct: 238 MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDF 297
Query: 173 LKGSNNVAIGYDEGSVLL 190
K + V G + +V +
Sbjct: 298 HKTAPYVVTGSVDQTVKV 315
Score = 61.3 bits (147), Expect = 4e-11
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
L GH V V ++ ++S ++D +K+WDY+ +TL+GH ++ + F
Sbjct: 12 ALSGHRSPVTRVIFHP--VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 69
Score = 55.9 bits (133), Expect = 2e-09
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 105 KIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGL 164
K W L GH ++ V FHP ++++ SED +++VW T E +L
Sbjct: 1 KEWI-PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59
Query: 165 ERVWTI 170
+ V I
Sbjct: 60 DSVQDI 65
Score = 51.7 bits (122), Expect = 5e-08
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 1/142 (0%)
Query: 82 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGS 141
N + +++S + D+ +K+W+ Q CV+T GH + + V + + ++ + S
Sbjct: 103 NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 162
Query: 142 EDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAV-S 200
D +VRVW T + L V IS S+ +I GS K G+ P + S
Sbjct: 163 NDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 222
Query: 201 MDVNGCKIIWARHSEVQQANLK 222
+ +W + + L
Sbjct: 223 GSRDKTIKMWDVSTGMCLMTLV 244
Score = 41.7 bits (96), Expect = 9e-05
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 70 ILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
+KTL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 281 CMKTLNAHEHFVTSLDFHK--TAPYVVTGSVDQTVKVWE 317
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 80.2 bits (196), Expect = 2e-17
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 75 YGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPEL 134
G+ V + G L++G DD +WD L GH +S + +
Sbjct: 267 DNIICGITSVSFSKSGR--LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDG 324
Query: 135 PIVITGSEDGSVRVWH 150
V TGS D +++W+
Sbjct: 325 MAVATGSWDSFLKIWN 340
Score = 69.4 bits (168), Expect = 1e-13
Identities = 24/122 (19%), Positives = 49/122 (40%), Gaps = 4/122 (3%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQN--ISAV 128
+T GHE +N + ++ G+ +G+DD +++D + + T I++V
Sbjct: 219 RQTFTGHESDINAICFFPNGN--AFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV 276
Query: 129 CFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSV 188
F +++ G +D + VW + L RV + VA G + +
Sbjct: 277 SFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336
Query: 189 LL 190
+
Sbjct: 337 KI 338
Score = 64.8 bits (156), Expect = 3e-12
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 86 YYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGS 145
D +SGA D K+WD + C QT GH +I+A+CF P TGS+D +
Sbjct: 190 LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT 249
Query: 146 VRVWHSGTHRLEISLTYGLER--VWTISSLKGSNNVAIGYDEGSVLL 190
R++ + ++ ++ + ++S K + GYD+ + +
Sbjct: 250 CRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296
Score = 53.2 bits (126), Expect = 2e-08
Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 4/102 (3%)
Query: 53 QESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK 112
Q ++ + IQ+ T +TL GH + + + D L+S + D + IWD
Sbjct: 32 QITNNIDPVGRIQMRTR--RTLRGHLAKIYAMHWGT--DSRLLVSASQDGKLIIWDSYTT 87
Query: 113 TCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTH 154
V + + + P V G D +++ T
Sbjct: 88 NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Score = 48.2 bits (113), Expect = 7e-07
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 114 CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTIS 171
+TL GH I A+ + + ++++ S+DG + +W S T ++ V T +
Sbjct: 47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCA 104
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 72.9 bits (177), Expect = 9e-15
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 49 KISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
K+ +++ K+ + + T GH+ V V + Y++SG+ DR V WD
Sbjct: 279 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE--YILSGSKDRGVLFWD 336
Query: 109 YQNKTCVQTLEGHGQNISAVC------FHPELPIVITGSEDGSVRVW 149
++ + L+GH ++ +V PE + TGS D R+W
Sbjct: 337 KKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIW 383
Score = 59.4 bits (142), Expect = 2e-10
Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 20/137 (14%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK------------TCVQTLE 119
++ GH+ V V + G ++SG+ DR VK+W+ QN TC T
Sbjct: 248 ESGTGHKDSVYSVVFTRDGQ--SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI 305
Query: 120 GHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGS--- 176
GH + +V +++GS+D V W + + L V +++ GS
Sbjct: 306 GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLG 365
Query: 177 ---NNVAIGYDEGSVLL 190
N A G + +
Sbjct: 366 PEYNVFATGSGDCKARI 382
Score = 50.2 bits (118), Expect = 2e-07
Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 82 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-------GHGQNISAVCFHPEL 134
GD Y+ +G+ DR V++WD + V+ L+ GH ++ +V F +
Sbjct: 207 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG 266
Query: 135 PIVITGSEDGSVRVWHSGT------------HRLEISLTYGLERVWTISSLKGSNNVAIG 182
V++GS D SV++W+ E++ + V ++++ + + G
Sbjct: 267 QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSG 326
Query: 183 YDEGSVLL 190
+ VL
Sbjct: 327 SKDRGVLF 334
Score = 44.8 bits (104), Expect = 1e-05
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 21/98 (21%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEG---------- 120
L H V CV + + G+ YL +G + +++ + + V L
Sbjct: 55 LHKSLDHTSVVCCVKFSNDGE--YLATGCNKT-TQVYRVSDGSLVARLSDDSAANKDPEN 111
Query: 121 --------HGQNISAVCFHPELPIVITGSEDGSVRVWH 150
I +VCF P+ + TG+ED +R+W
Sbjct: 112 LNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWD 149
Score = 42.9 bits (99), Expect = 5e-05
Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Query: 70 ILKTLYGHEKGVNCVDYYHGG----DKPYLISGADDRLVKIWDYQ 110
L L GH V V +G + +G+ D +IW Y+
Sbjct: 342 PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386
Score = 36.7 bits (83), Expect = 0.004
Identities = 31/139 (22%), Positives = 48/139 (34%), Gaps = 7/139 (5%)
Query: 82 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGS 141
+ + L+SG+ DR V+IWD + C TL + + + GS
Sbjct: 165 DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGS 224
Query: 142 EDGSVRVWHSGTHRLEISLTYGLER-------VWTISSLKGSNNVAIGYDEGSVLLKVGR 194
D +VRVW S T L L E V+++ + +V G + SV L +
Sbjct: 225 LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 284
Query: 195 EEPAVSMDVNGCKIIWARH 213
S
Sbjct: 285 NANNKSDSKTPNSGTCEVT 303
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 70.6 bits (171), Expect = 3e-14
Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 75 YGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPEL 134
+ HE V + + + G + +S D L+ W + ++ + +
Sbjct: 262 HLHESCVLSLKFAYCGK--WFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDD 318
Query: 135 PIVITGSEDGSVRVW 149
++TGS D V+
Sbjct: 319 KYIVTGSGDKKATVY 333
Score = 51.0 bits (120), Expect = 1e-07
Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 9/89 (10%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE-----GHGQNI 125
+ TL H + V V + ++ +G VK+WD + + I
Sbjct: 45 INTL-NHGEVVCAVTISNPTR--HVYTGGKGC-VKVWDISHPGNKSPVSQLDCLNRDNYI 100
Query: 126 SAVCFHPELPIVITGSEDGSVRVWHSGTH 154
+ P+ +I G E ++ +W
Sbjct: 101 RSCKLLPDGCTLIVGGEASTLSIWDLAAP 129
Score = 44.8 bits (104), Expect = 1e-05
Identities = 10/116 (8%), Positives = 32/116 (27%), Gaps = 4/116 (3%)
Query: 75 YGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPEL 134
+ + + Y G+ + + + V + +K + H + ++ F
Sbjct: 221 HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL---HESCVLSLKFAYCG 277
Query: 135 PIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
++ +D + W + V + + G + +
Sbjct: 278 KWFVSTGKDNLLNAWRTPYGASIFQSKES-SSVLSCDISVDDKYIVTGSGDKKATV 332
Score = 36.7 bits (83), Expect = 0.003
Identities = 6/43 (13%), Positives = 14/43 (32%), Gaps = 2/43 (4%)
Query: 66 VATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
V D D Y+++G+ D+ +++
Sbjct: 294 TPYGASIFQSKESSSVLSCDISV--DDKYIVTGSGDKKATVYE 334
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 65.3 bits (157), Expect = 2e-12
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 73 TLYGHEKGV-NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFH 131
TL GH V C+ + + Y+I+GADD++++++D NK + L GH + A+ +
Sbjct: 7 TLRGHMTSVITCLQF----EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYA 62
Query: 132 PELPIVITGSEDGSVRVWHSGTH 154
I+++GS D +VRVW
Sbjct: 63 HG-GILVSGSTDRTVRVWDIKKG 84
Score = 56.8 bits (135), Expect = 1e-09
Identities = 10/76 (13%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Query: 75 YGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ-TLEGHGQNISAVCFHPE 133
H ++ + ++ D ++ + I++ ++ V + I +V F +
Sbjct: 278 SYHHTNLSAITTFYVSDN--ILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK 335
Query: 134 LPIVITGSEDGSVRVW 149
+V +DG +
Sbjct: 336 T-LVAAVEKDGQSFLE 350
Score = 44.1 bits (102), Expect = 2e-05
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 117 TLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGS 176
TL GH ++ C E VITG++D +RV+ S + + L+ VW + G
Sbjct: 7 TLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG 65
Score = 38.3 bits (87), Expect = 0.001
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN--KTCVQTLEGHGQNISAV 128
L L GH+ GV + Y HGG L+SG+ DR V++WD + T V +
Sbjct: 46 LLQLSGHDGGVWALKYAHGG---ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDI 102
Query: 129 CFHPELPIVITGSEDGSVRVWHSGTHR 155
+ + ++TGS D ++ VW
Sbjct: 103 VEYKNIKYIVTGSRDNTLHVWKLPKES 129
Score = 35.6 bits (80), Expect = 0.008
Identities = 12/87 (13%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 107 WDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYG-LE 165
+ + H N+SA+ ++ + +++ + +L + +
Sbjct: 266 RGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDAD 325
Query: 166 RVWTISSLKGSNNVAIGYDEGSVLLKV 192
++W++ + KG VA +G L++
Sbjct: 326 QIWSV-NFKGKTLVAAVEKDGQSFLEI 351
Score = 31.0 bits (68), Expect = 0.22
Identities = 3/42 (7%), Positives = 11/42 (26%), Gaps = 3/42 (7%)
Query: 68 TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDY 109
L+ + + V++ + + D +
Sbjct: 314 KLVHANILKDADQIWSVNFKGKT---LVAAVEKDGQSFLEIL 352
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 63.9 bits (153), Expect = 5e-12
Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Query: 70 ILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL-EGHGQNISAV 128
I + YGH K + + G L S + + WD + + H I+ +
Sbjct: 4 IDQVRYGHNKAITALSSSADGK--TLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 129 CFHPELPIVITGSEDGSVRVWHSGT 153
+ + +D V G+
Sbjct: 62 KTTSKGDLFTVSWDDHLKVVPAGGS 86
Score = 53.5 bits (126), Expect = 1e-08
Identities = 8/51 (15%), Positives = 17/51 (33%)
Query: 113 TCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYG 163
+ Q GH + I+A+ + + + +G + W T
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDV 53
Score = 52.3 bits (123), Expect = 3e-08
Identities = 10/71 (14%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 82 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL---EGHGQNISAVCFHPELPIVI 138
D L +G+ D V +W+ + + ++++V + E ++
Sbjct: 226 KVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNE-TTIV 284
Query: 139 TGSEDGSVRVW 149
+ +D +++ W
Sbjct: 285 SAGQDSNIKFW 295
Score = 34.2 bits (76), Expect = 0.021
Identities = 14/90 (15%), Positives = 33/90 (36%), Gaps = 2/90 (2%)
Query: 103 LVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTY 162
+ + + H ++ V + P+ + TGS D SV VW+ +
Sbjct: 205 PYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIK 264
Query: 163 GLERVWTISSLKGSNN--VAIGYDEGSVLL 190
G + +++S+ N + + ++
Sbjct: 265 GAHAMSSVNSVIWLNETTIVSAGQDSNIKF 294
Score = 33.8 bits (75), Expect = 0.030
Identities = 7/64 (10%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Query: 45 MIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLV 104
+ + V +N + + + H + ++ ++S D +
Sbjct: 235 DNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL--NETTIVSAGQDSNI 292
Query: 105 KIWD 108
K W+
Sbjct: 293 KFWN 296
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 64.1 bits (154), Expect = 5e-12
Identities = 13/76 (17%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 81 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT--CVQTLEGHGQNISAVCFHPELPIVI 138
++C + D+ + ++ V I++ V L+ H ++ V + P+ ++
Sbjct: 10 ISCHAWNK--DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV 67
Query: 139 TGSEDGSVRVWHSGTH 154
T D + VW
Sbjct: 68 TCGTDRNAYVWTLKGR 83
Score = 41.8 bits (96), Expect = 9e-05
Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 4/104 (3%)
Query: 54 ESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 113
+ V + + + L H V VD+ + +++ DR +W + +T
Sbjct: 27 NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN--RIVTCGTDRNAYVWTLKGRT 84
Query: 114 CV--QTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHR 155
+ + V + P GS + + +
Sbjct: 85 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 128
Score = 41.0 bits (94), Expect = 2e-04
Identities = 7/68 (10%), Positives = 20/68 (29%), Gaps = 2/68 (2%)
Query: 125 ISAVCFHPELPIVITGSEDGSVRVWH--SGTHRLEISLTYGLERVWTISSLKGSNNVAIG 182
IS ++ + + + V ++ L +V + SN +
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69
Query: 183 YDEGSVLL 190
+ + +
Sbjct: 70 GTDRNAYV 77
Score = 36.4 bits (82), Expect = 0.004
Identities = 8/66 (12%), Positives = 14/66 (21%), Gaps = 5/66 (7%)
Query: 88 HGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPE----LPIVITGSED 143
G D+ H ++S + T D
Sbjct: 292 QRGLTARERFQNLDKKASSEG-SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMD 350
Query: 144 GSVRVW 149
G + +W
Sbjct: 351 GGMSIW 356
Score = 36.4 bits (82), Expect = 0.005
Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Query: 76 GHEKGVNCVDYYHGG--DKPYLISGADDRLVKIWDYQNKTCVQTLEGH 121
H+ V+ + GG + D + IWD ++ L+
Sbjct: 323 LHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV--RSLESALKDL 368
Score = 35.2 bits (79), Expect = 0.010
Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 3/110 (2%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
V+ V + + + + D V + D K V TL + AV F
Sbjct: 196 ESSSSCGWVHGVCFSA--NGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFIT 253
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIG 182
E +V G D ++ + ++S L+ S +
Sbjct: 254 ESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQ 302
Score = 32.1 bits (71), Expect = 0.12
Identities = 15/84 (17%), Positives = 27/84 (32%)
Query: 107 WDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLER 166
+ + VCF V S D +V + + +L
Sbjct: 186 SKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLP 245
Query: 167 VWTISSLKGSNNVAIGYDEGSVLL 190
+ ++ + S+ VA G+D VL
Sbjct: 246 LLAVTFITESSLVAAGHDCFPVLF 269
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 63.8 bits (153), Expect = 5e-12
Identities = 9/70 (12%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Query: 82 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVC-FHPELPIVITG 140
+ D + S + D+ +KIW+ +T+ + +++
Sbjct: 240 SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSI 299
Query: 141 SEDGSVRVWH 150
S +G + +
Sbjct: 300 SANGFINFVN 309
Score = 56.1 bits (133), Expect = 2e-09
Identities = 13/83 (15%), Positives = 23/83 (27%), Gaps = 2/83 (2%)
Query: 68 TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISA 127
T + +L +G V + V + T + H +
Sbjct: 6 TALFPSLPRTARGTAVVLGNTP-AGDKIQYCNGTS-VYTVPVGSLTDTEIYTEHSHQTTV 63
Query: 128 VCFHPELPIVITGSEDGSVRVWH 150
P +G G+VR+W
Sbjct: 64 AKTSPSGYYCASGDVHGNVRIWD 86
Score = 38.0 bits (86), Expect = 0.002
Identities = 9/85 (10%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Query: 107 WDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLER 166
+ H ++ + + P+ + + S D ++++W+ T ++E ++ G
Sbjct: 223 KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 282
Query: 167 VWTISSLKGSNN-VAIGYDEGSVLL 190
+ + + G +
Sbjct: 283 EDQQLGIIWTKQALVSISANGFINF 307
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 62.2 bits (149), Expect = 2e-11
Identities = 12/71 (16%), Positives = 23/71 (32%), Gaps = 3/71 (4%)
Query: 82 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAV---CFHPELPIVI 138
+ D + D +++WD CVQ Q + +I
Sbjct: 253 GGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRII 312
Query: 139 TGSEDGSVRVW 149
+ S DG++ +
Sbjct: 313 SLSLDGTLNFY 323
Score = 39.9 bits (91), Expect = 4e-04
Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 6/88 (6%)
Query: 91 DKPYLISGA-DDRLVKIWDYQNKT--CVQTLEGH-GQNISAVCFHPELP--IVITGSEDG 144
+ V+ D + V GH ++ V F P + +G E G
Sbjct: 28 TTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESG 87
Query: 145 SVRVWHSGTHRLEISLTYGLERVWTISS 172
V VW + S+ ++ + + +
Sbjct: 88 KVIVWGWTFDKESNSVEVNVKSEFQVLA 115
Score = 34.1 bits (76), Expect = 0.023
Identities = 14/121 (11%), Positives = 36/121 (29%), Gaps = 5/121 (4%)
Query: 75 YGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPEL 134
+ V V++ + + G+D ++ + + + L
Sbjct: 202 HKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL 261
Query: 135 P--IVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTIS---SLKGSNNVAIGYDEGSVL 189
T D ++RVW T + T +++ G+ + +G++
Sbjct: 262 DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLN 321
Query: 190 L 190
Sbjct: 322 F 322
Score = 33.0 bits (73), Expect = 0.046
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
TL + G V G+ +IS + D + ++
Sbjct: 290 TLDKQQLGNQQVGVVATGNG-RIISLSLDGTLNFYE 324
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 60.2 bits (144), Expect = 7e-11
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
+ KGV C+ Y D ++SG D +KIWD C + L GH ++ + +
Sbjct: 8 IHCRSETSKGVYCLQY----DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY 63
Query: 131 HPELPIVITGSEDGSVRVWHSGTH 154
+ I + V ++G
Sbjct: 64 DERVIITGSSDSTVRVWDVNTGEM 87
Score = 59.9 bits (143), Expect = 1e-10
Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 11/82 (13%)
Query: 77 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ---------NKTCVQTLEGHGQNISA 127
+G + D ++SGA D +K+WD C++TL H +
Sbjct: 213 VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 272
Query: 128 VCFHPELPIVITGSEDGSVRVW 149
+ F +++ S D ++ +W
Sbjct: 273 LQFDEFQ--IVSSSHDDTILIW 292
Score = 44.5 bits (103), Expect = 1e-05
Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
++TL GH++G+ C+ Y ++SG+ D +++WD + C++ G C
Sbjct: 171 VRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCI 224
Query: 131 HPELPIVITGSEDGSVRVWHSGT 153
+ +++G+ DG ++VW
Sbjct: 225 RFDNKRIVSGAYDGKIKVWDLVA 247
Score = 43.7 bits (101), Expect = 2e-05
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 82 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGS 141
D Y++S + DR +K+W+ V+TL GH + I+ + + +V++GS
Sbjct: 138 RAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGS 195
Query: 142 EDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
D ++R+W L E V I + + G +G + +
Sbjct: 196 SDNTIRLWDIECGACLRVLEGHEELVRCIR--FDNKRIVSGAYDGKIKV 242
Score = 42.9 bits (99), Expect = 3e-05
Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 112 KTCVQTLEGHGQNISAV-CFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVW 168
+ +Q + + V C + +++G D ++++W T + LT V
Sbjct: 2 RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVL 59
Score = 42.1 bits (97), Expect = 6e-05
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 68 TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
TL L+TL H V + + D+ ++S + D + IWD
Sbjct: 257 TLCLRTLVEHSGRVFRLQF----DEFQIVSSSHDDTILIWD 293
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 60.2 bits (144), Expect = 9e-11
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
K L GH+ V + G ++SG+DD +K+W C++TL GH + +
Sbjct: 9 PKVLKGHDDHVITCLQFCGN---RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM 65
Query: 131 HP 132
Sbjct: 66 RD 67
Score = 54.4 bits (129), Expect = 8e-09
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
L TL GH Y D +++SG+ D +++WD + C+ TL GH S +
Sbjct: 170 LHTLQGH----TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL 225
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAI-GYDEGSVL 189
+ +++G+ D +V++W T + +L + ++ L+ + N I D+G+V
Sbjct: 226 KDNI--LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVK 283
Query: 190 L 190
L
Sbjct: 284 L 284
Score = 53.3 bits (126), Expect = 2e-08
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 10/128 (7%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
+ TL GH+ + ++ L+SG D VKIWD + C+QTL+G ++ SAV
Sbjct: 210 IHTLTGHQSLTSGMEL----KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC 265
Query: 131 HPELP-IVITGSEDGSVRVWHSGTHRLEISLTYGLE-----RVWTISSLKGSNNVAIGYD 184
VIT S+DG+V++W T +L VW I + A+G
Sbjct: 266 LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR 325
Query: 185 EGSVLLKV 192
G+ K+
Sbjct: 326 NGTEETKL 333
Score = 52.5 bits (124), Expect = 3e-08
Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
Query: 82 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL-----EGHGQNISAVCFHPELPI 136
+K ++I+ +DD VK+WD + ++ L G G + + +
Sbjct: 260 QSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLV 319
Query: 137 VITGSEDGS----VRVW 149
GS +G+ + V
Sbjct: 320 CAVGSRNGTEETKLLVL 336
Score = 51.0 bits (120), Expect = 1e-07
Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 107 WDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLER 166
W + L+GH ++ C +++GS+D +++VW + T + +L
Sbjct: 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 167 VWTIS 171
VW+
Sbjct: 60 VWSSQ 64
Score = 48.3 bits (113), Expect = 6e-07
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 73 TLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP 132
L GH V CV Y ++SGA D +VK+WD + +TC+ TL+GH + ++ F
Sbjct: 132 VLMGHVAAVRCVQYDG----RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 187
Query: 133 ELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
V++GS D S+RVW T +LT + N + G + +V +
Sbjct: 188 IH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKI 241
Score = 30.2 bits (66), Expect = 0.45
Identities = 5/50 (10%), Positives = 14/50 (28%), Gaps = 6/50 (12%)
Query: 65 QVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADD----RLVKIWDYQ 110
+ L+ G V + + G+ + + + D+
Sbjct: 292 FIRNLVTLESGGSGGVVWRIRASNTKL--VCAVGSRNGTEETKLLVLDFD 339
Score = 28.2 bits (61), Expect = 1.9
Identities = 30/156 (19%), Positives = 54/156 (34%), Gaps = 40/156 (25%)
Query: 71 LKTLYGHEKGVNCVDY------------------------------------YHGGDKPY 94
L+TL GH GV +
Sbjct: 50 LRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 109
Query: 95 LISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTH 154
++SG+ D +++WD + C+ L GH + C + V++G+ D V+VW T
Sbjct: 110 VVSGSRDATLRVWDIETGQCLHVLMGHVAAV--RCVQYDGRRVVSGAYDFMVKVWDPETE 167
Query: 155 RLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
+L RV+++ +V G + S+ +
Sbjct: 168 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV 201
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 58.8 bits (140), Expect = 2e-10
Identities = 7/69 (10%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Query: 83 CVDYYHGGDKPYLISGADDRLVKIWDYQN-KTCVQTLEGHGQNISAVCFHPELPIVITGS 141
++ + +G+ D + I+ + ++ L H ++ + + +++
Sbjct: 218 KGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP-STLVSSG 276
Query: 142 EDGSVRVWH 150
D ++ W+
Sbjct: 277 ADACIKRWN 285
Score = 50.0 bits (117), Expect = 2e-07
Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 11/84 (13%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
LKT+ GH KG+ + LISG+ D + W + + H I ++
Sbjct: 6 LKTISGHNKGITALTVN------PLISGSYDGRIMEWSSSS-----MHQDHSNLIVSLDN 54
Query: 131 HPELPIVITGSEDGSVRVWHSGTH 154
+D +
Sbjct: 55 SKAQEYSSISWDDTLKVNGITKHE 78
Score = 49.6 bits (116), Expect = 2e-07
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 111 NKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGT 153
+ ++T+ GH + I+A+ +P +I+GS DG + W S +
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS 40
Score = 41.5 bits (95), Expect = 1e-04
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 70 ILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
I+K L H+ GVN + + L+S D +K W+
Sbjct: 250 IIKALNAHKDGVNNLLWETPS---TLVSSGADACIKRWN 285
Score = 29.2 bits (63), Expect = 0.77
Identities = 13/79 (16%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
Query: 107 WDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYG-LE 165
+ + + A E +V TGS D ++ ++ I +
Sbjct: 200 RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD 259
Query: 166 RVWTISSLKGSNNVAIGYD 184
V + S V+ G D
Sbjct: 260 GVNNLLWETPSTLVSSGAD 278
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase
fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Length = 198
Score = 56.8 bits (137), Expect = 3e-10
Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 246 KYRLDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYDGL----DFHHNVSRARFE 301
+D+ + ++ +L+ AAE LS+ Q ++V + + + V+RA+ E
Sbjct: 62 DQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLE 121
Query: 302 SLIGGLLTSFVQPCMHVL 319
SL+ L+ ++ L
Sbjct: 122 SLVEDLVNRSIELLKVAL 139
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 57.2 bits (136), Expect = 1e-09
Identities = 11/89 (12%), Positives = 31/89 (34%), Gaps = 3/89 (3%)
Query: 71 LKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCF 130
VN +++ +L + D ++ W+ Q + ++ + S V
Sbjct: 244 NLKDTNLAYPVNSIEFSP--RHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE-DSVVKI 300
Query: 131 HPELPIVITGSEDGSVRVWHSGTHRLEIS 159
I+ + D + + + +E++
Sbjct: 301 ACSDNILCLATSDDTFKTNAAIDQTIELN 329
Score = 56.4 bits (134), Expect = 2e-09
Identities = 7/89 (7%), Positives = 25/89 (28%), Gaps = 6/89 (6%)
Query: 70 ILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE---GHGQNIS 126
I++ + ++ + L+ + D + ++ + + L + +
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKS--LLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL 60
Query: 127 AVCFHPELP-IVITGSEDGSVRVWHSGTH 154
F + G+ G +
Sbjct: 61 CCNFIDNTDLQIYVGTVQGEILKVDLIGS 89
Score = 51.8 bits (122), Expect = 5e-08
Identities = 13/65 (20%), Positives = 23/65 (35%)
Query: 114 CVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSL 173
VQ + IS + P +++ S DGS+ V+ + L L +
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC 62
Query: 174 KGSNN 178
+N
Sbjct: 63 NFIDN 67
Score = 42.1 bits (97), Expect = 6e-05
Identities = 18/153 (11%), Positives = 41/153 (26%), Gaps = 16/153 (10%)
Query: 48 YKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 107
I +S+V+ F K ++ + D V +
Sbjct: 162 RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVE 221
Query: 108 DYQNKTCVQTL---------------EGHGQNISAVCFHPELPIVITGSEDGSVRVWHSG 152
+ ++ ++++ F P + T DG + W+
Sbjct: 222 FFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281
Query: 153 THRLEISLT-YGLERVWTISSLKGSNNVAIGYD 184
T + + + + V I+ +A D
Sbjct: 282 TRKKIKNFAKFNEDSVVKIACSDNILCLATSDD 314
Score = 26.0 bits (55), Expect = 9.0
Identities = 10/101 (9%), Positives = 26/101 (25%)
Query: 68 TLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISA 127
+ L ++ + C ++ D + ++K+ + +
Sbjct: 46 NVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGIC 105
Query: 128 VCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVW 168
+I S DG + V + + L
Sbjct: 106 RICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN 146
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase
fragment {Cow (Bos taurus) [TaxId: 9913]}
Length = 193
Score = 53.4 bits (128), Expect = 4e-09
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 246 KYRLDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIG 305
K++ DIS++ R+V +LR A E LS+ +++ ++SLY+G+DF+ +++RARFE L
Sbjct: 60 KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNA 119
Query: 306 GLLTSFVQPCMHVL 319
L + P L
Sbjct: 120 DLFRGTLDPVEKAL 133
Score = 46.1 bits (109), Expect = 1e-06
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 317 HVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNITHDQI 376
LS+ +++ ++SLY+G+DF+ +++RARFE L L + P+E L + + QI
Sbjct: 84 RTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQI 143
Query: 377 NK 378
+
Sbjct: 144 HD 145
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 53.3 bits (126), Expect = 2e-08
Identities = 17/117 (14%), Positives = 33/117 (28%), Gaps = 17/117 (14%)
Query: 76 GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC------VQTLEGHGQNISAVC 129
H+ + V + +S + D +K+WD + + H + V
Sbjct: 12 AHDADIFSVSA----CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVD 67
Query: 130 F-------HPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNV 179
EL +V T S G + + + + + K S
Sbjct: 68 VLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWA 124
Score = 47.9 bits (112), Expect = 1e-06
Identities = 17/115 (14%), Positives = 35/115 (30%), Gaps = 7/115 (6%)
Query: 42 NKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADD 101
N + R+ + + ++ + H V + + G+ L S D
Sbjct: 253 NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE--TLCSAGWD 310
Query: 102 RLVKIWDYQNKTCVQTLEGHGQNIS----AVCFHPELPIVITGSEDGSVRVWHSG 152
++ WD + K + TL H +I + + V+ G
Sbjct: 311 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVF-DVKFLKKG 364
Score = 44.8 bits (104), Expect = 9e-06
Identities = 9/53 (16%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Query: 113 TCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLE 165
+ H +I +V ++ S DG ++VW + E
Sbjct: 5 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYS 55
Score = 39.5 bits (90), Expect = 5e-04
Identities = 5/111 (4%), Positives = 24/111 (21%), Gaps = 15/111 (13%)
Query: 55 SSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 114
+ + + H V + + + + + + +
Sbjct: 42 KLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDE 101
Query: 115 VQTLEG----------HGQNISAVCFHPELP-----IVITGSEDGSVRVWH 150
+ + + A+ + ++ G+ +W
Sbjct: 102 TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWK 152
Score = 31.4 bits (69), Expect = 0.18
Identities = 10/77 (12%), Positives = 20/77 (25%)
Query: 85 DYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDG 144
G Y + + H + ++ F+ + + DG
Sbjct: 252 SNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG 311
Query: 145 SVRVWHSGTHRLEISLT 161
+R W T +L
Sbjct: 312 KLRFWDVKTKERITTLN 328
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 52.9 bits (125), Expect = 3e-08
Identities = 15/111 (13%), Positives = 37/111 (33%), Gaps = 5/111 (4%)
Query: 51 SYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVD-YYHGGDKPYLISGADDRLVKIWDY 109
Y + K +PI V + + E + HG Y + ++ +D
Sbjct: 246 EYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDV 305
Query: 110 QNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISL 160
+ + + N++ + + V+ +DG + + E ++
Sbjct: 306 KTRK----VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352
Score = 35.6 bits (80), Expect = 0.008
Identities = 7/69 (10%), Positives = 18/69 (26%), Gaps = 5/69 (7%)
Query: 91 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDG--SVRV 148
D + + + I D ++ I V + + + +
Sbjct: 14 DGDLIAFVSRGQ-AFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLGI 70
Query: 149 WHSGTHRLE 157
+ T + E
Sbjct: 71 YDYRTGKAE 79
Score = 35.6 bits (80), Expect = 0.008
Identities = 4/54 (7%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 72 KTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNI 125
+ + + + + ++ DD + + + +T+E + +
Sbjct: 308 RKVTEVKNNLTDLRLSADRK--TVMVRKDDGKIYTFPLEKPEDERTVETDKRPL 359
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 46.7 bits (109), Expect = 2e-06
Identities = 14/123 (11%), Positives = 34/123 (27%), Gaps = 2/123 (1%)
Query: 34 ETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKP 93
+ T + K + + + + + T T + P
Sbjct: 205 HEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP 264
Query: 94 YLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGT 153
I G +R + +D + + ++ V F + + G + V++ T
Sbjct: 265 NQIYGVLNR-LAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 322
Query: 154 HRL 156
Sbjct: 323 LEK 325
Score = 41.6 bits (96), Expect = 1e-04
Identities = 7/75 (9%), Positives = 18/75 (24%), Gaps = 2/75 (2%)
Query: 91 DKPYLISGADDRLVKIWDYQNKTCVQTLE-GHGQNISAVCFHPE-LPIVITGSEDGSVRV 148
Y+I + + D + T ++ P+ + + G +
Sbjct: 7 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYG 66
Query: 149 WHSGTHRLEISLTYG 163
T +
Sbjct: 67 IDLDTCKNTFHANLS 81
Score = 32.8 bits (73), Expect = 0.070
Identities = 12/80 (15%), Positives = 28/80 (35%), Gaps = 5/80 (6%)
Query: 49 KISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 108
Y +R+ ++ + L + CV + GD L G + +++
Sbjct: 265 NQIYGVLNRLAKYD---LKQRKLIKAANLDHTYYCVAFDKKGD--KLYLGGTFNDLAVFN 319
Query: 109 YQNKTCVQTLEGHGQNISAV 128
V+ ++ G ++S
Sbjct: 320 PDTLEKVKNIKLPGGDMSTT 339
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 45.6 bits (106), Expect = 5e-06
Identities = 8/68 (11%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Query: 92 KPYLISGADDRLVKIWDYQNKTCVQTLE--GHGQNISAVCFHPE-LPIVITGSEDGSVRV 148
+ Y+++ A + + D + + + G P T ++ S+
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 149 WHSGTHRL 156
T
Sbjct: 61 IDLVTGET 68
Score = 44.4 bits (103), Expect = 1e-05
Identities = 6/74 (8%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Query: 80 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVIT 139
++ + + + +++ +D + ++ + + +V + V
Sbjct: 238 IMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWL 296
Query: 140 GSEDGSVRVWHSGT 153
G G + + + T
Sbjct: 297 GGALGDLAAYDAET 310
Score = 33.6 bits (75), Expect = 0.032
Identities = 5/60 (8%), Positives = 13/60 (21%), Gaps = 2/60 (3%)
Query: 64 IQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQ 123
+ V+ G + G + +D + ++ G
Sbjct: 265 FDLEKNASIKRVPLPHSYYSVNVSTDGS--TVWLGGALGDLAAYDAETLEKKGQVDLPGN 322
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 44.9 bits (105), Expect = 1e-05
Identities = 9/92 (9%), Positives = 25/92 (27%), Gaps = 9/92 (9%)
Query: 90 GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
+ ++ D + + D +K V+ ++ G + ++ D + +
Sbjct: 30 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDT-GYAVHISRMSASGRYLLVIGRDARIDMI 88
Query: 150 HSGTHRLEISLTYGLERVWTISSLKGSNNVAI 181
V I + +V
Sbjct: 89 DLWAKEPTK--------VAEIKIGIEARSVES 112
Score = 34.9 bits (79), Expect = 0.015
Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 10/69 (14%)
Query: 88 HGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVI-------TG 140
H GD + G D + + ++ V L+G G + HP+ +
Sbjct: 272 HLGDGSISLIGTDPKNHPQYAWK---KVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDA 328
Query: 141 SEDGSVRVW 149
SV V+
Sbjct: 329 RISQSVAVF 337
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 44.4 bits (103), Expect = 1e-05
Identities = 5/69 (7%), Positives = 20/69 (28%)
Query: 64 IQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQ 123
+ T + ++ ++ D+ + I D ++ ++++ G
Sbjct: 285 LDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGH 344
Query: 124 NISAVCFHP 132
+
Sbjct: 345 GPQVITTAD 353
Score = 43.2 bits (100), Expect = 3e-05
Identities = 7/68 (10%), Positives = 21/68 (30%), Gaps = 3/68 (4%)
Query: 91 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHP--ELPIVITGSEDGSVRV 148
+ R V + D + + E G I ++ + + + D ++ +
Sbjct: 269 QRDEWRHKTASRFVVVLDAKTGERLAKFE-MGHEIDSINVSQDEKPLLYALSTGDKTLYI 327
Query: 149 WHSGTHRL 156
+ +
Sbjct: 328 HDAESGEE 335
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 44.1 bits (102), Expect = 2e-05
Identities = 7/62 (11%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Query: 96 ISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPE-LPIVITGSEDGSVRVWHSGTH 154
I+ ++ + + D + T+ N P+ + + + V + + T+
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 155 RL 156
+
Sbjct: 65 NV 66
Score = 38.3 bits (87), Expect = 0.001
Identities = 9/84 (10%), Positives = 23/84 (27%), Gaps = 2/84 (2%)
Query: 81 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPE-LPIVIT 139
G V + D + + + + P+ + +
Sbjct: 203 SGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVA 261
Query: 140 GSEDGSVRVWHSGTHRLEISLTYG 163
S +V V + T+ + ++ G
Sbjct: 262 LSFCNTVSVIDTATNTITATMAVG 285
Score = 34.5 bits (77), Expect = 0.019
Identities = 12/100 (12%), Positives = 22/100 (22%), Gaps = 7/100 (7%)
Query: 35 TKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPY 94
+ I T + + G K Y
Sbjct: 200 AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVY 259
Query: 95 LISGADDRLVKIWDYQNKTCVQTLE------GHGQNISAV 128
++ + V + D T T+ GQ I ++
Sbjct: 260 -VALSFCNTVSVIDTATNTITATMAVGKNPYASGQFIGSI 298
Score = 26.0 bits (55), Expect = 7.6
Identities = 8/53 (15%), Positives = 20/53 (37%)
Query: 138 ITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLL 190
I SE ++ V ++++ ++ G + + S G+ V +
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSI 58
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 35.9 bits (82), Expect = 0.007
Identities = 7/72 (9%), Positives = 17/72 (23%), Gaps = 1/72 (1%)
Query: 90 GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVW 149
+ + ++ D + + D L+ G + + DG V +
Sbjct: 30 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMI 88
Query: 150 HSGTHRLEISLT 161
Sbjct: 89 DLWMKEPTTVAE 100
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase
fragment {Cow (Bos taurus) [TaxId: 9913]}
Length = 185
Score = 31.2 bits (70), Expect = 0.13
Identities = 11/75 (14%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 1 KSRLISQAKNTIIKNKRALNTELTETDIETIVRETKVDITTNKDMIEYKISYQESSRVKA 60
K+++ NT+ KR + + +++ ++ + + + ++ Y+ K+
Sbjct: 53 KNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYK--GETKS 110
Query: 61 FNPIQVATLILKTLY 75
F P +V++++L +
Sbjct: 111 FYPEEVSSMVLTKMK 125
>d2b3ca_ g.3.7.1 (A:) Scorpion toxin {Centruroides sculpturatus,
beta [TaxId: 218467]}
Length = 64
Score = 27.8 bits (62), Expect = 0.32
Identities = 10/39 (25%), Positives = 12/39 (30%), Gaps = 9/39 (23%)
Query: 83 CVDYYHGGDKPYLISGA-------DDRLVKIWDYQNKTC 114
C + GG Y D + W NKTC
Sbjct: 28 CKWKHIGGSYGYCYGFGCYCEGLPDS--TQTWPLPNKTC 64
>d1sa3a_ c.52.1.23 (A:) Restriction endonuclease MspI {Moraxella sp.
[TaxId: 479]}
Length = 262
Score = 29.6 bits (66), Expect = 0.53
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 13 IKNKRALNTELTETDIETIVRETKVDITTNKDMIEYKISYQESSRVKAFNPIQ 65
IK+ + E D+ETI + K++I +Q K F P+Q
Sbjct: 118 IKHSSKKKVSIAEYDVETICTGVGISDGELKELIRK---HQNDQSAKLFTPVQ 167
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 29.6 bits (65), Expect = 0.55
Identities = 6/39 (15%), Positives = 11/39 (28%), Gaps = 1/39 (2%)
Query: 90 GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAV 128
+ A LV + D + + G S +
Sbjct: 284 DKPLFYGLTATSDLV-VMDARTGALQHVEKQIGNTSSLL 321
>d2sn3a_ g.3.7.1 (A:) Scorpion toxin {Centruroides sculpturatus,
variant 3 [TaxId: 218467]}
Length = 65
Score = 26.3 bits (58), Expect = 1.2
Identities = 8/39 (20%), Positives = 12/39 (30%), Gaps = 9/39 (23%)
Query: 83 CVDYYHGGDKPYLISGA-------DDRLVKIWDYQNKTC 114
C GG Y + A + + NK+C
Sbjct: 29 CKAKNQGGSYGYCYAFACWCEGLPES--TPTYPLPNKSC 65
>d1cn2a_ g.3.7.1 (A:) Scorpion toxin {Mexican scorpion (Centruroides
noxius), toxin II [TaxId: 6878]}
Length = 66
Score = 25.9 bits (57), Expect = 1.6
Identities = 9/39 (23%), Positives = 12/39 (30%), Gaps = 9/39 (23%)
Query: 83 CVDYYHGGDKPYLISGA-------DDRLVKIWDYQNKTC 114
C Y G Y + A + +W NK C
Sbjct: 29 CKQQYGKGAGGYCYAFACWCTHLYEQ--AIVWPLPNKRC 65
>d2gu3a2 d.17.1.6 (A:34-98) Uncharacterized protein YpmB {Bacillus
subtilis [TaxId: 1423]}
Length = 65
Score = 25.1 bits (55), Expect = 3.6
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 75 YGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 106
V+ V+ + G +K Y++ G D + +
Sbjct: 15 ETDLAHVDQVETFVGKEKYYVVKGTDKKGTAL 46
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 26.7 bits (57), Expect = 4.8
Identities = 10/65 (15%), Positives = 17/65 (26%), Gaps = 8/65 (12%)
Query: 136 IVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGRE 195
+ I E + VW ++ L + + + D L R
Sbjct: 6 VYIASPESQQIHVW-------NLNHEGALTLTQVVDVPGQVQPMVVSPD-KRYLYVGVRP 57
Query: 196 EPAVS 200
E V
Sbjct: 58 EFRVL 62
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.133 0.384
Gapped
Lambda K H
0.267 0.0642 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,325,502
Number of extensions: 58691
Number of successful extensions: 303
Number of sequences better than 10.0: 1
Number of HSP's gapped: 239
Number of HSP's successfully gapped: 110
Length of query: 381
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 294
Effective length of database: 1,213,086
Effective search space: 356647284
Effective search space used: 356647284
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (24.8 bits)