Your job contains 1 sequence.
>psy4652
MWDMKHCDPKKCSGRKLARHNLIKILKLGERFRGFPKEAKFYLDKFKWGRTFLTLNEELL
DLYKACDTVLFIFLMRICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKT
NHPRLLPFLIAANPINYGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNE
ELLDLYKECDTIFYEDLDGERFPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDTSTDVV
KVQNEYLKKIEEERNMPNVPDFPPSESEEEEEEEEEEEEEDKAIEDELGRI
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4652
(291 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040718-63 - symbol:tsr3 "TSR3, 20S rRNA acc... 379 2.0e-47 2
UNIPROTKB|D4A6X9 - symbol:RGD1565744 "Probable ribosome b... 381 8.6e-47 2
MGI|MGI:1915577 - symbol:Tsr3 "TSR3 20S rRNA accumulation... 379 1.4e-46 2
UNIPROTKB|F1RFZ6 - symbol:TSR3 "Probable ribosome biogene... 375 1.8e-46 2
UNIPROTKB|A5PK98 - symbol:C25H16ORF42 "Probable ribosome ... 376 2.3e-46 2
UNIPROTKB|Q9UJK0 - symbol:TSR3 "Ribosome biogenesis prote... 372 6.0e-46 2
UNIPROTKB|F1PWP9 - symbol:TSR3 "Probable ribosome biogene... 362 4.1e-45 2
TAIR|locus:2184128 - symbol:AT5G10070 "AT5G10070" species... 367 2.5e-43 2
CGD|CAL0002246 - symbol:orf19.5802 species:5476 "Candida ... 339 1.1e-42 2
UNIPROTKB|Q5A0K9 - symbol:TSR3 "Ribosome biogenesis prote... 339 1.1e-42 2
POMBASE|SPAC1F3.04c - symbol:tsr3 "SSU-rRNA maturation pr... 337 2.8e-40 2
SGD|S000005532 - symbol:TSR3 "Protein required for 20S pr... 315 2.8e-40 2
DICTYBASE|DDB_G0267822 - symbol:DDB_G0267822 "UPF0293 pro... 339 1.2e-39 2
WB|WBGene00018679 - symbol:F52C12.2 species:6239 "Caenorh... 317 1.9e-39 2
ASPGD|ASPL0000028004 - symbol:AN5711 species:162425 "Emer... 287 2.4e-35 2
UNIPROTKB|G4NE08 - symbol:TSR3 "Ribosome biogenesis prote... 268 1.6e-32 2
>ZFIN|ZDB-GENE-040718-63 [details] [associations]
symbol:tsr3 "TSR3, 20S rRNA accumulation, homolog
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] HAMAP:MF_01116
Pfam:PF04068 ZFIN:ZDB-GENE-040718-63 InterPro:IPR007209
GO:GO:0006364 CTD:115939 eggNOG:COG2042 HOVERGEN:HBG063013
KO:K09140 OrthoDB:EOG4QRH50 InterPro:IPR007177 InterPro:IPR022968
PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638 HOGENOM:HOG000227039
EMBL:BC075886 IPI:IPI00484264 RefSeq:NP_001002370.1
UniGene:Dr.18499 STRING:Q6DHT1 PRIDE:Q6DHT1 GeneID:436643
KEGG:dre:436643 InParanoid:Q6DHT1 NextBio:20831088
ArrayExpress:Q6DHT1 Bgee:Q6DHT1 Uniprot:Q6DHT1
Length = 297
Score = 379 (138.5 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 79/168 (47%), Positives = 108/168 (64%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
+ L+P+G + V+ AD +I+ G AV+DCSWA++E+TPF+KM +HPRLLP+L+AANP+N
Sbjct: 95 LILSPMGTKYVTPADREIVAHGGLAVIDCSWARLEDTPFSKMIGSHPRLLPYLVAANPVN 154
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLY----KECDTI 192
YGKPCKLSCVEA AATF I GF A L KFKWG FL LN+ LL+ Y E + +
Sbjct: 155 YGKPCKLSCVEAYAATFCIVGFRDLAVLLLRKFKWGLGFLELNKTLLERYASSQSEEELL 214
Query: 193 FYEDLDGERFPKEAKFYLDKFKW--GRTFLTLNEELLDLYKECDTSTD 238
E P+E + +D F GR F+ LN + Y + D +++
Sbjct: 215 AVEKEFLSATPQEEE--IDPFDVDSGRDFVNLNRPVQAKYDDSDNTSE 260
Score = 134 (52.2 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 1 MWDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
MWD+ HCDPK+C+GRKLAR L++ L+L +RF G
Sbjct: 61 MWDLGHCDPKRCTGRKLARKGLVRCLRLNQRFNG 94
Score = 90 (36.7 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 206 AKFYLDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYLKKIEEERNM 256
A L KFKWG FL LN+ LL+ Y + +++ V+ E+L +E +
Sbjct: 180 AVLLLRKFKWGLGFLELNKTLLERYASSQSEEELLAVEKEFLSATPQEEEI 230
Score = 72 (30.4 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 16/30 (53%), Positives = 18/30 (60%)
Query: 34 GFPKEAKFYLDKFKWGRTFLTLNEELLDLY 63
GF A L KFKWG FL LN+ LL+ Y
Sbjct: 175 GFRDLAVLLLRKFKWGLGFLELNKTLLERY 204
>UNIPROTKB|D4A6X9 [details] [associations]
symbol:RGD1565744 "Probable ribosome biogenesis protein
C16orf42 homolog" species:10116 "Rattus norvegicus" [GO:0006364
"rRNA processing" evidence=IEA] HAMAP:MF_01116 Pfam:PF04068
InterPro:IPR007209 EMBL:CH473948 GO:GO:0006364 CTD:115939 KO:K09140
OrthoDB:EOG4QRH50 InterPro:IPR007177 InterPro:IPR022968
PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638
GeneTree:ENSGT00390000014665 IPI:IPI00952419 RefSeq:NP_001101738.1
UniGene:Rn.219246 Ensembl:ENSRNOT00000068336 GeneID:360494
KEGG:rno:360494 NextBio:672962 Uniprot:D4A6X9
Length = 263
Score = 381 (139.2 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 68/113 (60%), Positives = 85/113 (75%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
+ L+PVG Q VS AD ++ ++G AV+DCSWAK++ETPF KM+ +H RLLP+L+AANP+N
Sbjct: 35 LVLSPVGTQYVSPADRQLVAQSGIAVIDCSWAKLDETPFGKMRGSHLRLLPYLVAANPVN 94
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLYKEC 189
YG+PCKLSCVEA AA F I GF A L KFKWG+ FL LN +LLD Y C
Sbjct: 95 YGRPCKLSCVEAFAAAFCIVGFSDLAVILLRKFKWGKGFLDLNRQLLDKYAAC 147
Score = 126 (49.4 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 1 MWDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
MW++ HCDPK+C+GRKLAR L++ L+L +RF G
Sbjct: 1 MWELGHCDPKRCTGRKLARLGLVRCLRLSQRFGG 34
Score = 104 (41.7 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 202 FPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYLKKIEEERNMPNVPD 261
F A L KFKWG+ FL LN +LLD Y C +V++ + YL ++ N+
Sbjct: 116 FSDLAVILLRKFKWGKGFLDLNRQLLDKYAACCGPEEVLEAEQGYLASTKDTPEEENIDP 175
Query: 262 F 262
F
Sbjct: 176 F 176
Score = 95 (38.5 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 34 GFPKEAKFYLDKFKWGRTFLTLNEELLDLYKAC 66
GF A L KFKWG+ FL LN +LLD Y AC
Sbjct: 115 GFSDLAVILLRKFKWGKGFLDLNRQLLDKYAAC 147
>MGI|MGI:1915577 [details] [associations]
symbol:Tsr3 "TSR3 20S rRNA accumulation" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] HAMAP:MF_01116
MGI:MGI:1915577 Pfam:PF04068 InterPro:IPR007209 GO:GO:0006364
CTD:115939 eggNOG:COG2042 HOVERGEN:HBG063013 KO:K09140 OMA:LQAEQEF
OrthoDB:EOG4QRH50 InterPro:IPR007177 InterPro:IPR022968
PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638 EMBL:AK002309
EMBL:AK158743 EMBL:AK170074 EMBL:BC089019 IPI:IPI00121172
RefSeq:NP_001157190.1 RefSeq:NP_080952.2 UniGene:Mm.180687
ProteinModelPortal:Q5HZH2 STRING:Q5HZH2 PhosphoSite:Q5HZH2
PRIDE:Q5HZH2 DNASU:68327 Ensembl:ENSMUST00000063574 GeneID:68327
KEGG:mmu:68327 UCSC:uc008baf.2 GeneTree:ENSGT00390000014665
InParanoid:Q5HZH2 NextBio:327001 Bgee:Q5HZH2
CleanEx:MM_0610007P22RIK Genevestigator:Q5HZH2 Uniprot:Q5HZH2
Length = 323
Score = 379 (138.5 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 67/113 (59%), Positives = 85/113 (75%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
+ L+PVG + VS AD ++ ++G AV+DCSWAK+++TPF KM+ +H RLLP+L+AANP+N
Sbjct: 96 LVLSPVGTEYVSPADRQLVAQSGVAVIDCSWAKLDDTPFQKMRGSHLRLLPYLVAANPVN 155
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLYKEC 189
YG+PCKLSCVEA AA F I GF A L KFKWG+ FL LN ELLD Y C
Sbjct: 156 YGRPCKLSCVEAFAAAFCIVGFSDLAVILLRKFKWGKGFLDLNRELLDKYAAC 208
Score = 126 (49.4 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 1 MWDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
MW++ HCDPK+C+GRKLAR L++ L+L +RF G
Sbjct: 62 MWELGHCDPKRCTGRKLARLGLVRCLRLSQRFGG 95
Score = 100 (40.3 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 202 FPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYL 247
F A L KFKWG+ FL LN ELLD Y C +V++ + YL
Sbjct: 177 FSDLAVILLRKFKWGKGFLDLNRELLDKYAACRGPEEVLQAEQGYL 222
Score = 98 (39.6 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 20/33 (60%), Positives = 21/33 (63%)
Query: 34 GFPKEAKFYLDKFKWGRTFLTLNEELLDLYKAC 66
GF A L KFKWG+ FL LN ELLD Y AC
Sbjct: 176 GFSDLAVILLRKFKWGKGFLDLNRELLDKYAAC 208
>UNIPROTKB|F1RFZ6 [details] [associations]
symbol:TSR3 "Probable ribosome biogenesis protein C16orf42
homolog" species:9823 "Sus scrofa" [GO:0006364 "rRNA processing"
evidence=IEA] HAMAP:MF_01116 Pfam:PF04068 InterPro:IPR007209
GO:GO:0006364 KO:K09140 OMA:LQAEQEF InterPro:IPR007177
InterPro:IPR022968 PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638
GeneTree:ENSGT00390000014665 EMBL:FP340344 RefSeq:XP_003124772.2
Ensembl:ENSSSCT00000008799 GeneID:100515431 KEGG:ssc:100515431
Uniprot:F1RFZ6
Length = 316
Score = 375 (137.1 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 68/113 (60%), Positives = 84/113 (74%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
+ L+PVG Q VS AD ++ ++G AV+DCSWA++ ETPF KM+ +H RLLP L+AANP+N
Sbjct: 96 LVLSPVGSQYVSPADRQLVAQSGVAVIDCSWARLNETPFGKMRGSHLRLLPHLVAANPVN 155
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLYKEC 189
YG+PC+LSCVEA AATF I GF A L KFKWG+ FL LN ELLD Y C
Sbjct: 156 YGRPCRLSCVEAFAATFCILGFSDLAVLLLRKFKWGKGFLDLNRELLDKYAAC 208
Score = 129 (50.5 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 20/34 (58%), Positives = 29/34 (85%)
Query: 1 MWDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
MW++ HCDP++C+GRKLAR L++ L+LG+RF G
Sbjct: 62 MWELGHCDPRRCTGRKLARLGLVRCLRLGQRFGG 95
Score = 110 (43.8 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 202 FPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYLKKIEEERNMPNVPD 261
F A L KFKWG+ FL LN ELLD Y C +V++ + E+L +E V
Sbjct: 177 FSDLAVLLLRKFKWGKGFLDLNRELLDKYAACSGPEEVLQAEQEFLALAKEHPEEEEVDP 236
Query: 262 F 262
F
Sbjct: 237 F 237
Score = 98 (39.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 20/33 (60%), Positives = 21/33 (63%)
Query: 34 GFPKEAKFYLDKFKWGRTFLTLNEELLDLYKAC 66
GF A L KFKWG+ FL LN ELLD Y AC
Sbjct: 176 GFSDLAVLLLRKFKWGKGFLDLNRELLDKYAAC 208
>UNIPROTKB|A5PK98 [details] [associations]
symbol:C25H16ORF42 "Probable ribosome biogenesis protein
C16orf42 homolog" species:9913 "Bos taurus" [GO:0006364 "rRNA
processing" evidence=IEA] HAMAP:MF_01116 Pfam:PF04068
InterPro:IPR007209 GO:GO:0006364 CTD:115939 eggNOG:COG2042
HOVERGEN:HBG063013 KO:K09140 OMA:LQAEQEF OrthoDB:EOG4QRH50
InterPro:IPR007177 InterPro:IPR022968 PANTHER:PTHR20426
Pfam:PF04034 ProDom:PD016638 GeneTree:ENSGT00390000014665
HOGENOM:HOG000227039 EMBL:DAAA02057299 EMBL:BC142410
IPI:IPI00693340 RefSeq:NP_001092381.1 UniGene:Bt.16488
STRING:A5PK98 Ensembl:ENSBTAT00000018749 GeneID:508714
KEGG:bta:508714 InParanoid:A5PK98 NextBio:20868648 Uniprot:A5PK98
Length = 315
Score = 376 (137.4 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 73/132 (55%), Positives = 94/132 (71%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
+ L+PVG Q VS AD ++ ++G AV+DCSWA+++ETPF KM+ +H RLLP L+AANP+N
Sbjct: 96 LVLSPVGSQYVSPADRHLVAQSGVAVIDCSWARLDETPFGKMRGSHLRLLPHLVAANPVN 155
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDTIFYED 196
YG+PC+LSCVEA AATF I GF A L KFKWG+ FL LN +LLD Y C + E
Sbjct: 156 YGRPCRLSCVEAFAATFCILGFSDLAVILLRKFKWGKGFLDLNRQLLDKYAACSSP-EEV 214
Query: 197 LDGER-FPKEAK 207
L E+ F +AK
Sbjct: 215 LQAEQEFLAQAK 226
Score = 127 (49.8 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 1 MWDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
MW++ HCDP++C+GRKLAR L++ L+LG RF G
Sbjct: 62 MWELGHCDPRRCTGRKLARLGLVRCLRLGHRFGG 95
Score = 112 (44.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 202 FPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYLKKIEEERNMPNVPD 261
F A L KFKWG+ FL LN +LLD Y C + +V++ + E+L + +E +
Sbjct: 177 FSDLAVILLRKFKWGKGFLDLNRQLLDKYAACSSPEEVLQAEQEFLAQAKEHPEEEEIDP 236
Query: 262 F 262
F
Sbjct: 237 F 237
Score = 96 (38.9 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 34 GFPKEAKFYLDKFKWGRTFLTLNEELLDLYKACDT 68
GF A L KFKWG+ FL LN +LLD Y AC +
Sbjct: 176 GFSDLAVILLRKFKWGKGFLDLNRQLLDKYAACSS 210
>UNIPROTKB|Q9UJK0 [details] [associations]
symbol:TSR3 "Ribosome biogenesis protein TSR3 homolog"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] HAMAP:MF_01116 Pfam:PF04068 InterPro:IPR007209
EMBL:AE006467 EMBL:AL031709 GO:GO:0006364 EMBL:BC013943
EMBL:BC016699 EMBL:BC017325 IPI:IPI00011693 PIR:T45061
RefSeq:NP_001001410.1 UniGene:Hs.134846 ProteinModelPortal:Q9UJK0
STRING:Q9UJK0 PhosphoSite:Q9UJK0 DMDM:74753359 PaxDb:Q9UJK0
PRIDE:Q9UJK0 Ensembl:ENST00000007390 GeneID:115939 KEGG:hsa:115939
UCSC:uc002cll.3 CTD:115939 GeneCards:GC16M001400 HGNC:HGNC:14175
HPA:HPA046265 neXtProt:NX_Q9UJK0 PharmGKB:PA25558 eggNOG:COG2042
HOVERGEN:HBG063013 InParanoid:Q9UJK0 KO:K09140 OMA:LQAEQEF
OrthoDB:EOG4QRH50 PhylomeDB:Q9UJK0 GenomeRNAi:115939 NextBio:79710
Bgee:Q9UJK0 CleanEx:HS_C16orf42 Genevestigator:Q9UJK0
InterPro:IPR007177 InterPro:IPR022968 PANTHER:PTHR20426
Pfam:PF04034 ProDom:PD016638 Uniprot:Q9UJK0
Length = 312
Score = 372 (136.0 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 66/113 (58%), Positives = 85/113 (75%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
+ L+PVG Q S AD ++ ++G AV+DCSWA+++ETPF KM+ +H RLLP+L+AANP+N
Sbjct: 96 LVLSPVGKQYASPADRQLVAQSGVAVIDCSWARLDETPFGKMRGSHLRLLPYLVAANPVN 155
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLYKEC 189
YG+P +LSCVEA AATF I GFP A L KFKWG+ FL LN +LLD Y C
Sbjct: 156 YGRPYRLSCVEAFAATFCIVGFPDLAVILLRKFKWGKGFLDLNRQLLDKYAAC 208
Score = 127 (49.8 bits), Expect = 6.0e-46, Sum P(2) = 6.0e-46
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 1 MWDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
MW++ HCDP++C+GRKLAR L++ L+LG RF G
Sbjct: 62 MWELGHCDPRRCTGRKLARLGLVRCLRLGHRFGG 95
Score = 118 (46.6 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 202 FPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYLKKIEEERNMPNVPD 261
FP A L KFKWG+ FL LN +LLD Y C + +V++ + E+L +E +
Sbjct: 177 FPDLAVILLRKFKWGKGFLDLNRQLLDKYAACGSPEEVLQAEQEFLANAKESPQEEEIDP 236
Query: 262 F 262
F
Sbjct: 237 F 237
Score = 103 (41.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 20/33 (60%), Positives = 22/33 (66%)
Query: 34 GFPKEAKFYLDKFKWGRTFLTLNEELLDLYKAC 66
GFP A L KFKWG+ FL LN +LLD Y AC
Sbjct: 176 GFPDLAVILLRKFKWGKGFLDLNRQLLDKYAAC 208
>UNIPROTKB|F1PWP9 [details] [associations]
symbol:TSR3 "Probable ribosome biogenesis protein C16orf42
homolog" species:9615 "Canis lupus familiaris" [GO:0006364 "rRNA
processing" evidence=IEA] HAMAP:MF_01116 Pfam:PF04068
InterPro:IPR007209 GO:GO:0006364 CTD:115939 KO:K09140 OMA:LQAEQEF
InterPro:IPR007177 InterPro:IPR022968 PANTHER:PTHR20426
Pfam:PF04034 ProDom:PD016638 GeneTree:ENSGT00390000014665
EMBL:AAEX03004647 EMBL:AAEX03004648 EMBL:AAEX03004649
RefSeq:XP_537015.1 Ensembl:ENSCAFT00000031131 GeneID:479890
KEGG:cfa:479890 Uniprot:F1PWP9
Length = 312
Score = 362 (132.5 bits), Expect = 4.1e-45, Sum P(2) = 4.1e-45
Identities = 67/113 (59%), Positives = 82/113 (72%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
+ L+PVG Q VS AD ++ + G AV+DCSWA++ ETPF KM+ +H RLLP L+AANP+N
Sbjct: 96 LVLSPVGSQYVSCADRQLVAQCGVAVIDCSWARLNETPFGKMRGSHLRLLPHLVAANPVN 155
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLYKEC 189
YG+PCKLSCVEA AAT I GF A L KFKWG+ FL LN +LLD Y C
Sbjct: 156 YGRPCKLSCVEAFAATLCILGFSDLAIILLRKFKWGKGFLDLNRQLLDKYAAC 208
Score = 129 (50.5 bits), Expect = 4.1e-45, Sum P(2) = 4.1e-45
Identities = 20/34 (58%), Positives = 29/34 (85%)
Query: 1 MWDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
MW++ HCDP++C+GRKLAR L++ L+LG+RF G
Sbjct: 62 MWELGHCDPRRCTGRKLARLGLVRCLRLGQRFGG 95
Score = 105 (42.0 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 22/61 (36%), Positives = 30/61 (49%)
Query: 202 FPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYLKKIEEERNMPNVPD 261
F A L KFKWG+ FL LN +LLD Y C +V++ + E+L E +
Sbjct: 177 FSDLAIILLRKFKWGKGFLDLNRQLLDKYAACSGPEEVLQAEQEFLAHARERPEEEEIDP 236
Query: 262 F 262
F
Sbjct: 237 F 237
Score = 94 (38.1 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 34 GFPKEAKFYLDKFKWGRTFLTLNEELLDLYKAC 66
GF A L KFKWG+ FL LN +LLD Y AC
Sbjct: 176 GFSDLAIILLRKFKWGKGFLDLNRQLLDKYAAC 208
>TAIR|locus:2184128 [details] [associations]
symbol:AT5G10070 "AT5G10070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] HAMAP:MF_01116
Pfam:PF04068 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
InterPro:IPR007209 GO:GO:0006364 KO:K09140 InterPro:IPR007177
InterPro:IPR022968 PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638
OMA:CSWEEVE IPI:IPI00539103 RefSeq:NP_974761.1 UniGene:At.1622
PRIDE:F4KFG2 EnsemblPlants:AT5G10070.2 GeneID:830871
KEGG:ath:AT5G10070 PhylomeDB:F4KFG2 Uniprot:F4KFG2
Length = 266
Score = 367 (134.2 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 62/114 (54%), Positives = 88/114 (77%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
+ L+PVG QCVS+ D+D+I+ G AVVDCSWA++ + PF K++ PRLLP+L+AANP+N
Sbjct: 82 VVLSPVGRQCVSREDYDLIKRKGLAVVDCSWARLTDVPFAKLRCTAPRLLPWLVAANPVN 141
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLYKECD 190
YG+PC+LSCVEAL+A I+ G + A+ L KFKWG FL+LN+++L Y +C+
Sbjct: 142 YGRPCELSCVEALSAALILCGEKETAELLLGKFKWGHAFLSLNKDILKEYSKCE 195
Score = 123 (48.4 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 197 LDGERFPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYLKKIEEERNM 256
L GE+ + A+ L KFKWG FL+LN+++L Y +C+ S +++ VQN +L ++ +
Sbjct: 160 LCGEK--ETAELLLGKFKWGHAFLSLNKDILKEYSKCENSAEIISVQNSWLT---QQTQI 214
Query: 257 PNVP 260
P P
Sbjct: 215 PKQP 218
Score = 107 (42.7 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 1 MWDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
MWD CD K+C+GRKLAR NL+K L++ F G
Sbjct: 48 MWDFGQCDAKRCTGRKLARFNLLKELRVNTGFGG 81
Score = 85 (35.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 34 GFPKEAKFYLDKFKWGRTFLTLNEELLDLYKACD 67
G + A+ L KFKWG FL+LN+++L Y C+
Sbjct: 162 GEKETAELLLGKFKWGHAFLSLNKDILKEYSKCE 195
>CGD|CAL0002246 [details] [associations]
symbol:orf19.5802 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030490
"maturation of SSU-rRNA" evidence=IEA] HAMAP:MF_01116
CGD:CAL0002246 Pfam:PF04068 GO:GO:0005634 GO:GO:0005737
InterPro:IPR007209 GO:GO:0006364 EMBL:AACQ01000088
EMBL:AACQ01000087 eggNOG:COG2042 KO:K09140 InterPro:IPR007177
InterPro:IPR022968 PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638
RefSeq:XP_715278.1 RefSeq:XP_715343.1 STRING:Q5A0K9 GeneID:3643022
GeneID:3643096 KEGG:cal:CaO19.13224 KEGG:cal:CaO19.5802
Uniprot:Q5A0K9
Length = 346
Score = 339 (124.4 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 65/138 (47%), Positives = 92/138 (66%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
I ++P G V D +I++ NGAAVV+CSWA+++E PFNK+ + RLLP+L+AANP+N
Sbjct: 89 IVVSPNGKSIVCPNDKEIVETNGAAVVECSWARLDEIPFNKIGGKNERLLPYLVAANPVN 148
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDTIFYED 196
YG+P +L+CVEALAA F I G A+ L F WG TFL +NEEL++LY++C
Sbjct: 149 YGRPWRLNCVEALAACFAIVGHTDWAELLLSNFSWGLTFLKINEELIELYQQCT------ 202
Query: 197 LDGERFPKEAKFYLDKFK 214
D E K + +L+K +
Sbjct: 203 -DSESITKAQEQWLEKIE 219
Score = 136 (52.9 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 206 AKFYLDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYLKKIEEE 253
A+ L F WG TFL +NEEL++LY++C S + K Q ++L+KIE+E
Sbjct: 174 AELLLSNFSWGLTFLKINEELIELYQQCTDSESITKAQEQWLEKIEQE 221
Score = 129 (50.5 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 1 MWDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
MWD HCDPK+CSG+KL R LIK L++G++F+G
Sbjct: 55 MWDFDHCDPKRCSGKKLERLGLIKNLRVGQKFQG 88
>UNIPROTKB|Q5A0K9 [details] [associations]
symbol:TSR3 "Ribosome biogenesis protein TSR3"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] HAMAP:MF_01116 CGD:CAL0002246
Pfam:PF04068 GO:GO:0005634 GO:GO:0005737 InterPro:IPR007209
GO:GO:0006364 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG2042
KO:K09140 InterPro:IPR007177 InterPro:IPR022968 PANTHER:PTHR20426
Pfam:PF04034 ProDom:PD016638 RefSeq:XP_715278.1 RefSeq:XP_715343.1
STRING:Q5A0K9 GeneID:3643022 GeneID:3643096 KEGG:cal:CaO19.13224
KEGG:cal:CaO19.5802 Uniprot:Q5A0K9
Length = 346
Score = 339 (124.4 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 65/138 (47%), Positives = 92/138 (66%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
I ++P G V D +I++ NGAAVV+CSWA+++E PFNK+ + RLLP+L+AANP+N
Sbjct: 89 IVVSPNGKSIVCPNDKEIVETNGAAVVECSWARLDEIPFNKIGGKNERLLPYLVAANPVN 148
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDTIFYED 196
YG+P +L+CVEALAA F I G A+ L F WG TFL +NEEL++LY++C
Sbjct: 149 YGRPWRLNCVEALAACFAIVGHTDWAELLLSNFSWGLTFLKINEELIELYQQCT------ 202
Query: 197 LDGERFPKEAKFYLDKFK 214
D E K + +L+K +
Sbjct: 203 -DSESITKAQEQWLEKIE 219
Score = 136 (52.9 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 206 AKFYLDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYLKKIEEE 253
A+ L F WG TFL +NEEL++LY++C S + K Q ++L+KIE+E
Sbjct: 174 AELLLSNFSWGLTFLKINEELIELYQQCTDSESITKAQEQWLEKIEQE 221
Score = 129 (50.5 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 1 MWDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
MWD HCDPK+CSG+KL R LIK L++G++F+G
Sbjct: 55 MWDFDHCDPKRCSGKKLERLGLIKNLRVGQKFQG 88
>POMBASE|SPAC1F3.04c [details] [associations]
symbol:tsr3 "SSU-rRNA maturation protein Tsr3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0046872
"metal ion binding" evidence=ISM] HAMAP:MF_01116
PomBase:SPAC1F3.04c Pfam:PF04068 GO:GO:0005634 GO:GO:0005737
EMBL:CU329670 GO:GO:0046872 InterPro:IPR007209 GO:GO:0030490
eggNOG:COG2042 KO:K09140 InterPro:IPR007177 InterPro:IPR022968
PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638 PIR:T38075
RefSeq:NP_593007.1 STRING:Q10409 EnsemblFungi:SPAC1F3.04c.1
GeneID:2542142 KEGG:spo:SPAC1F3.04c HOGENOM:HOG000227039
OMA:THEEDIW OrthoDB:EOG4FR41Q NextBio:20803214 Uniprot:Q10409
Length = 288
Score = 337 (123.7 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 62/138 (44%), Positives = 91/138 (65%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
+ +TP G VS AD + GA+VV+CSWA+IEE PF+++ RLLP+L+A+NP+N
Sbjct: 65 VVITPNGKVPVSPADKEYFDNGGASVVECSWARIEEIPFSRIGGRCERLLPYLVASNPVN 124
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDTIFYED 196
YG+P +L+C EALAA I G+P EA+ +D FKWG +F +NEELLD+Y +C
Sbjct: 125 YGRPWRLNCAEALAACMYIVGYPNEARLLMDNFKWGHSFFEVNEELLDIYAQCH------ 178
Query: 197 LDGERFPKEAKFYLDKFK 214
D + ++ K YL++ +
Sbjct: 179 -DAQDIQEKEKKYLEEME 195
Score = 141 (54.7 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 24/58 (41%), Positives = 40/58 (68%)
Query: 202 FPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYLKKIE----EERN 255
+P EA+ +D FKWG +F +NEELLD+Y +C + D+ + + +YL+++E E+RN
Sbjct: 146 YPNEARLLMDNFKWGHSFFEVNEELLDIYAQCHDAQDIQEKEKKYLEEMEASYQEQRN 203
Score = 115 (45.5 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 34 GFPKEAKFYLDKFKWGRTFLTLNEELLDLYKAC 66
G+P EA+ +D FKWG +F +NEELLD+Y C
Sbjct: 145 GYPNEARLLMDNFKWGHSFFEVNEELLDIYAQC 177
Score = 108 (43.1 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 1 MWDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
MWD HC+P CSG++L R ++ L++G++FRG
Sbjct: 31 MWDFGHCNPNACSGKRLERLGCVRNLRIGQKFRG 64
>SGD|S000005532 [details] [associations]
symbol:TSR3 "Protein required for 20S pre-rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0030490 "maturation
of SSU-rRNA" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
HAMAP:MF_01116 SGD:S000005532 Pfam:PF04068 GO:GO:0005634
GO:GO:0005737 EMBL:BK006948 InterPro:IPR007209 EMBL:U43491
GO:GO:0030490 eggNOG:COG2042 KO:K09140 InterPro:IPR007177
InterPro:IPR022968 PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638
GeneTree:ENSGT00390000014665 OrthoDB:EOG4FR41Q EMBL:Z74914
PIR:S61990 RefSeq:NP_014648.1 ProteinModelPortal:Q12094
DIP:DIP-1251N IntAct:Q12094 MINT:MINT-395199 STRING:Q12094
PaxDb:Q12094 EnsemblFungi:YOR006C GeneID:854167 KEGG:sce:YOR006C
CYGD:YOR006c OMA:VGQKFQG NextBio:975953 Genevestigator:Q12094
GermOnline:YOR006C Uniprot:Q12094
Length = 313
Score = 315 (115.9 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 58/113 (51%), Positives = 81/113 (71%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
I ++P G V D +I++++GA+VV+CSWA++EE PFNK+ H RLLP+L+AAN +N
Sbjct: 84 IVVSPNGKGVVCPDDLEIVEQHGASVVECSWARLEEVPFNKIGGKHERLLPYLVAANQVN 143
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLYKEC 189
YG+P +L+CVEALAA F I G A L F WG FL LN+ELL++Y++C
Sbjct: 144 YGRPWRLNCVEALAACFAIVGRMDWASELLSHFSWGMGFLELNKELLEIYQQC 196
Score = 130 (50.8 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 1 MWDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
MWD HCDPK+CSG+KL R LIK L++G++F+G
Sbjct: 50 MWDFDHCDPKRCSGKKLERLGLIKSLRVGQKFQG 83
Score = 111 (44.1 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 210 LDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYLKKIEEE 253
L F WG FL LN+ELL++Y++C V + + E+L+K+E+E
Sbjct: 173 LSHFSWGMGFLELNKELLEIYQQCTDCDSVKRAEEEWLQKLEKE 216
Score = 76 (31.8 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 43 LDKFKWGRTFLTLNEELLDLYKAC 66
L F WG FL LN+ELL++Y+ C
Sbjct: 173 LSHFSWGMGFLELNKELLEIYQQC 196
>DICTYBASE|DDB_G0267822 [details] [associations]
symbol:DDB_G0267822 "UPF0293 protein C16orf42"
species:44689 "Dictyostelium discoideum" [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] HAMAP:MF_01116 dictyBase:DDB_G0267822 Pfam:PF04068
EMBL:AAFI02000003 InterPro:IPR007209 GO:GO:0006364 eggNOG:COG2042
KO:K09140 InterPro:IPR007177 InterPro:IPR022968 PANTHER:PTHR20426
Pfam:PF04034 ProDom:PD016638 RefSeq:XP_647334.1 STRING:Q55G49
PRIDE:Q55G49 EnsemblProtists:DDB0189570 GeneID:8616144
KEGG:ddi:DDB_G0267822 InParanoid:Q55G49 OMA:HICDERD Uniprot:Q55G49
Length = 365
Score = 339 (124.4 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 64/113 (56%), Positives = 77/113 (68%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
I LTP Q +S AD DI+Q G +VVDCSWAK++ PF KMK H RLLPFLIAANP+N
Sbjct: 101 IVLTPSAKQSISPADRDIVQNLGVSVVDCSWAKVDSIPFGKMKGGHDRLLPFLIAANPVN 160
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLYKEC 189
YGKP KL+CVEA+AA I GF E L FKWG +F +N++L + Y C
Sbjct: 161 YGKPFKLTCVEAVAACLFITGFTAEGHQVLGGFKWGSSFYKVNKDLFEKYILC 213
Score = 110 (43.8 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 202 FPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYLKKIEEER 254
F E L FKWG +F +N++L + Y C S +VV++QNE++ K E+++
Sbjct: 182 FTAEGHQVLGGFKWGSSFYKVNKDLFEKYILCANSQEVVQIQNEFIAKCEQDQ 234
Score = 100 (40.3 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 1 MWDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
MWD CD KKC+GRKL R +K + L +F+G
Sbjct: 67 MWDFGQCDSKKCTGRKLERLGYVKSINLTHKFKG 100
Score = 69 (29.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 34 GFPKEAKFYLDKFKWGRTFLTLNEELLDLYKAC 66
GF E L FKWG +F +N++L + Y C
Sbjct: 181 GFTAEGHQVLGGFKWGSSFYKVNKDLFEKYILC 213
>WB|WBGene00018679 [details] [associations]
symbol:F52C12.2 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] HAMAP:MF_01116
Pfam:PF04068 InterPro:IPR007209 GO:GO:0019915 GO:GO:0006364
eggNOG:COG2042 KO:K09140 InterPro:IPR007177 InterPro:IPR022968
PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638
GeneTree:ENSGT00390000014665 HOGENOM:HOG000227039 EMBL:FO081438
RefSeq:NP_741332.1 ProteinModelPortal:Q95X18 STRING:Q95X18
PaxDb:Q95X18 EnsemblMetazoa:F52C12.2.1 EnsemblMetazoa:F52C12.2.2
GeneID:176995 KEGG:cel:CELE_F52C12.2 UCSC:F52C12.2 CTD:176995
WormBase:F52C12.2 InParanoid:Q95X18 OMA:CSWEEVE NextBio:894904
Uniprot:Q95X18
Length = 261
Score = 317 (116.6 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 55/115 (47%), Positives = 76/115 (66%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
+ L+P G ++ D +++NG VVDCSW ++E TP +++K RLLP+L+AAN +N
Sbjct: 99 LVLSPTGTYTLAPRDRPFVEQNGLCVVDCSWKEVERTPLHRVKAPEHRLLPYLVAANSVN 158
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDT 191
YGKPC L+C EA+AA I GF + A + F WG F+ LN+ELLDLY CDT
Sbjct: 159 YGKPCHLTCAEAMAAGLYILGFQEAASRLMKPFSWGDHFIELNKELLDLYAACDT 213
Score = 156 (60.0 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 202 FPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYLKKIEEERNMPNVP- 260
F + A + F WG F+ LN+ELLDLY CDT DV++ QNEYL++I++ER +
Sbjct: 180 FQEAASRLMKPFSWGDHFIELNKELLDLYAACDTPEDVIRAQNEYLERIDKEREQHSRDI 239
Query: 261 DFPP 264
D PP
Sbjct: 240 DLPP 243
Score = 120 (47.3 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 1 MWDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
M+D CDPK+CSGRKL R NLI +KLG+RF G
Sbjct: 65 MYDFNQCDPKRCSGRKLLRANLITEVKLGQRFPG 98
Score = 101 (40.6 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 34 GFPKEAKFYLDKFKWGRTFLTLNEELLDLYKACDT 68
GF + A + F WG F+ LN+ELLDLY ACDT
Sbjct: 179 GFQEAASRLMKPFSWGDHFIELNKELLDLYAACDT 213
>ASPGD|ASPL0000028004 [details] [associations]
symbol:AN5711 species:162425 "Emericella nidulans"
[GO:0030490 "maturation of SSU-rRNA" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] HAMAP:MF_01116
Pfam:PF04068 GO:GO:0005634 GO:GO:0005737 InterPro:IPR007209
EMBL:BN001305 GO:GO:0006364 InterPro:IPR007177 InterPro:IPR022968
PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638 HOGENOM:HOG000227039
EnsemblFungi:CADANIAT00003351 OMA:MVRHKKD Uniprot:C8VFM9
Length = 370
Score = 287 (106.1 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 53/115 (46%), Positives = 79/115 (68%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
+ ++P + VS AD D++++ GAAVV+CSW +++E P++++ RLLP+LIAAN +N
Sbjct: 76 VVVSPNAKRVVSPADRDLLEQYGAAVVECSWVRVKEVPWSRIGGKCERLLPYLIAANTVN 135
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLYKECDT 191
YGKP +L+CVEALAA F I G A+ L F++G FL +N +LL Y C+T
Sbjct: 136 YGKPWRLNCVEALAACFYICGHEDWAQEVLKHFRYGEAFLEINSQLLKRYAACET 190
Score = 111 (44.1 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 2 WDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
WD+ HCDPK+CSG++L L++ L +G++F+G
Sbjct: 43 WDLGHCDPKRCSGKRLMHFGLMRELAIGQKFQG 75
Score = 104 (41.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 206 AKFYLDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYLKKIEEE 253
A+ L F++G FL +N +LL Y C+T DV + + E+L KIE E
Sbjct: 161 AQEVLKHFRYGEAFLEINSQLLKRYAACETEEDVKRTEEEWLAKIERE 208
>UNIPROTKB|G4NE08 [details] [associations]
symbol:TSR3 "Ribosome biogenesis protein TSR3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008150
"biological_process" evidence=ISS] HAMAP:MF_01116 Pfam:PF04068
GO:GO:0005634 GO:GO:0005737 EMBL:CM001235 InterPro:IPR007209
GO:GO:0006364 KO:K09140 InterPro:IPR007177 InterPro:IPR022968
PANTHER:PTHR20426 Pfam:PF04034 ProDom:PD016638
RefSeq:XP_003718127.1 EnsemblFungi:MGG_00851T0 GeneID:2674813
KEGG:mgr:MGG_00851 Uniprot:G4NE08
Length = 425
Score = 268 (99.4 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 52/113 (46%), Positives = 75/113 (66%)
Query: 77 ICLTPVGVQCVSKADHDIIQENGAAVVDCSWAKIEETPFNKMKTNHPRLLPFLIAANPIN 136
+ +TP G VS AD + ++++GAAVV+CSWA+ +E ++++ RLLP+L+AAN +N
Sbjct: 95 VIVTPNGKTVVSPADRETLEQHGAAVVECSWARTKEVQWSRVGGRCERLLPYLVAANTVN 154
Query: 137 YGKPCKLSCVEALAATFIIAGFPKEAKFYLDKFKWGRTFLTLNEELLDLYKEC 189
YGKP +L+CVEALAA F I G + A L+ F +G FL +N LL Y C
Sbjct: 155 YGKPWRLNCVEALAAAFAICGRLEWAAQILEPFSYGAAFLEINAALLKRYAAC 207
Score = 108 (43.1 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 2 WDMKHCDPKKCSGRKLARHNLIKILKLGERFRG 34
WD+ HCDP++CSG+KL + +++ L LG+R +G
Sbjct: 62 WDLGHCDPRRCSGKKLMKLGMMRPLSLGQRHQG 94
Score = 87 (35.7 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 210 LDKFKWGRTFLTLNEELLDLYKECDTSTDVVKVQNEYLKKIEEE 253
L+ F +G FL +N LL Y C + +V K + E+++K+E E
Sbjct: 184 LEPFSYGAAFLEINAALLKRYAACADADEVKKTEEEWMEKLERE 227
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.142 0.447 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 291 275 0.00079 115 3 11 22 0.46 33
33 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 601 (64 KB)
Total size of DFA: 217 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.85u 0.10s 23.95t Elapsed: 00:00:01
Total cpu time: 23.85u 0.10s 23.95t Elapsed: 00:00:01
Start: Thu Aug 15 13:11:33 2013 End: Thu Aug 15 13:11:34 2013