Your job contains 1 sequence.
>psy4653
MPLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPV
RAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDD
MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT
LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4653
(229 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1C016 - symbol:COPB2 "Uncharacterized protein"... 1109 2.2e-112 1
UNIPROTKB|P35605 - symbol:COPB2 "Coatomer subunit beta'" ... 1109 2.2e-112 1
UNIPROTKB|E2R667 - symbol:COPB2 "Uncharacterized protein"... 1109 2.2e-112 1
UNIPROTKB|P35606 - symbol:COPB2 "Coatomer subunit beta'" ... 1109 2.2e-112 1
UNIPROTKB|F1SL54 - symbol:COPB2 "Uncharacterized protein"... 1109 2.2e-112 1
MGI|MGI:1354962 - symbol:Copb2 "coatomer protein complex,... 1109 2.2e-112 1
ZFIN|ZDB-GENE-010724-7 - symbol:copb2 "coatomer protein c... 1098 3.3e-111 1
RGD|628746 - symbol:Copb2 "coatomer protein complex, subu... 1096 5.3e-111 1
FB|FBgn0025724 - symbol:beta'Cop "beta'-coatomer protein"... 1093 1.1e-110 1
WB|WBGene00009542 - symbol:F38E11.5 species:6239 "Caenorh... 1026 1.4e-103 1
UNIPROTKB|G8JKX8 - symbol:COPB2 "Coatomer subunit beta'" ... 966 3.2e-97 1
UNIPROTKB|B4DZI8 - symbol:COPB2 "Coatomer protein complex... 966 3.2e-97 1
TAIR|locus:2016214 - symbol:AT1G79990 species:3702 "Arabi... 909 3.5e-91 1
DICTYBASE|DDB_G0278285 - symbol:copB2 "coatomer protein c... 895 1.1e-89 1
ASPGD|ASPL0000006005 - symbol:AN5972 species:162425 "Emer... 841 5.6e-84 1
CGD|CAL0005039 - symbol:orf19.3467 species:5476 "Candida ... 810 1.1e-80 1
POMBASE|SPBC16C6.13c - symbol:sec27 "coatomer beta' subun... 793 6.8e-79 1
SGD|S000003105 - symbol:SEC27 "Essential beta'-coat prote... 780 1.6e-77 1
WB|WBGene00012757 - symbol:Y41C4A.11 species:6239 "Caenor... 612 1.0e-59 1
DICTYBASE|DDB_G0267982 - symbol:copA "coatomer protein co... 345 7.4e-37 2
TAIR|locus:2036823 - symbol:AT1G62020 species:3702 "Arabi... 328 3.7e-35 2
WB|WBGene00022119 - symbol:Y71F9AL.17 species:6239 "Caeno... 297 1.8e-34 2
POMBASE|SPBPJ4664.04 - symbol:SPBPJ4664.04 "coatomer alph... 341 1.2e-29 1
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi... 338 2.6e-29 1
ZFIN|ZDB-GENE-020905-2 - symbol:copa "coatomer protein co... 330 1.8e-28 1
UNIPROTKB|H9L3L2 - symbol:LOC100859596 "Uncharacterized p... 324 7.1e-28 1
UNIPROTKB|H9KZL3 - symbol:LOC100859596 "Uncharacterized p... 324 7.5e-28 1
UNIPROTKB|Q27954 - symbol:COPA "Coatomer subunit alpha" s... 324 8.0e-28 1
UNIPROTKB|F1RJX8 - symbol:COPA "Uncharacterized protein" ... 324 8.0e-28 1
MGI|MGI:1334462 - symbol:Copa "coatomer protein complex s... 324 8.0e-28 1
UNIPROTKB|G3V6T1 - symbol:Copa "Protein Copa" species:101... 324 8.0e-28 1
FB|FBgn0025725 - symbol:alphaCop "alpha-coatomer protein"... 324 8.1e-28 1
ASPGD|ASPL0000037303 - symbol:copA species:162425 "Emeric... 323 1.0e-27 1
UNIPROTKB|P53621 - symbol:COPA "Coatomer subunit alpha" s... 323 1.0e-27 1
CGD|CAL0000105 - symbol:orf19.1672 species:5476 "Candida ... 294 1.4e-25 2
UNIPROTKB|F1PU93 - symbol:COPA "Coatomer subunit alpha" s... 301 2.3e-25 1
SGD|S000002304 - symbol:COP1 "Alpha subunit of COPI vesic... 285 1.1e-23 1
CGD|CAL0004039 - symbol:orf19.3301 species:5476 "Candida ... 181 4.0e-22 2
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 157 2.0e-21 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 256 3.8e-21 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 262 3.8e-21 1
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 149 7.8e-20 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 248 1.8e-19 1
FB|FBgn0030011 - symbol:Gbeta5 "Gbeta5" species:7227 "Dro... 224 2.2e-18 1
UNIPROTKB|Q6PBD6 - symbol:wdr61 "WD repeat-containing pro... 222 2.2e-18 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 225 3.1e-18 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 231 3.6e-18 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 229 4.3e-18 1
UNIPROTKB|Q9GZS3 - symbol:WDR61 "WD repeat-containing pro... 216 9.5e-18 1
UNIPROTKB|H0YN81 - symbol:WDR61 "WD repeat-containing pro... 216 9.5e-18 1
UNIPROTKB|F1NFT8 - symbol:WDR61 "WD repeat-containing pro... 215 1.2e-17 1
UNIPROTKB|Q5ZJH5 - symbol:WDR61 "WD repeat-containing pro... 215 1.2e-17 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 215 1.5e-17 1
UNIPROTKB|Q32LN7 - symbol:WDR61 "WD repeat-containing pro... 213 2.0e-17 1
UNIPROTKB|E2RBV0 - symbol:WDR61 "Uncharacterized protein"... 213 2.0e-17 1
UNIPROTKB|Q6GMD2 - symbol:wdr61 "WD repeat-containing pro... 212 2.5e-17 1
DICTYBASE|DDB_G0291231 - symbol:mhkA "myosin heavy chain ... 225 2.7e-17 1
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 222 2.8e-17 1
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 211 3.2e-17 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 213 3.3e-17 1
ASPGD|ASPL0000005389 - symbol:sconB species:162425 "Emeri... 219 5.2e-17 1
MGI|MGI:1917493 - symbol:Wdr61 "WD repeat domain 61" spec... 209 5.3e-17 1
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 211 5.3e-17 2
POMBASE|SPCC5E4.03c - symbol:taf5 "SAGA complex subunit/T... 218 6.1e-17 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 213 7.2e-17 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 213 7.2e-17 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 213 7.2e-17 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 213 7.2e-17 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 213 7.2e-17 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 213 7.2e-17 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 213 7.2e-17 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 213 7.2e-17 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 213 7.2e-17 1
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 215 8.1e-17 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 208 8.4e-17 1
UNIPROTKB|E1C9D6 - symbol:GNB3 "Uncharacterized protein" ... 209 8.8e-17 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 212 9.2e-17 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 212 9.9e-17 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 217 1.1e-16 1
WB|WBGene00001680 - symbol:gpb-2 species:6239 "Caenorhabd... 209 1.1e-16 1
POMBASE|SPAC57A10.05c - symbol:pof1 "F-box/WD repeat prot... 215 1.1e-16 1
ASPGD|ASPL0000005121 - symbol:nudF species:162425 "Emeric... 212 1.2e-16 1
UNIPROTKB|Q00664 - symbol:nudF "Nuclear distribution prot... 212 1.2e-16 1
MGI|MGI:1913972 - symbol:Spag16 "sperm associated antigen... 215 1.3e-16 1
RGD|1308228 - symbol:Wdr61 "WD repeat domain 61" species:... 205 1.4e-16 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 210 1.5e-16 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 210 1.5e-16 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 207 1.7e-16 1
UNIPROTKB|Q40687 - symbol:LOC_Os03g46650 "Guanine nucleot... 208 2.0e-16 1
UNIPROTKB|F1RKU4 - symbol:WDR61 "Uncharacterized protein"... 203 2.3e-16 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 208 2.5e-16 1
UNIPROTKB|P16520 - symbol:GNB3 "Guanine nucleotide-bindin... 205 2.6e-16 1
WB|WBGene00006481 - symbol:plrg-1 species:6239 "Caenorhab... 209 3.3e-16 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 205 3.3e-16 1
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 203 3.6e-16 1
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 209 3.7e-16 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 205 3.7e-16 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 206 4.1e-16 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 204 4.3e-16 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 204 4.3e-16 1
WARNING: Descriptions of 1029 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 198/226 (87%), Positives = 211/226 (93%)
Query: 1 MPLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPV 60
MPLRLDIKRKLTARSDRVK DLHPTEPWMLASLYNG V VWNHET VK+FEVCDLPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDD 120
RAAKFV RKNW+VTG+DDMQ+ VFNYNTLER H FEAHSDY+RC+AVHPTQPF+LTSSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
MLIKLW+W+K W+C QVFEGHTHYVMQIVINPKDNN FASASLDRT+KVWQLGS+SPNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
LEGHEKGVNC+DYY GGDKPYLISGADDRLVKIWDYQNKTCVQTLE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
Score = 206 (77.6 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 56/204 (27%), Positives = 97/204 (47%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W++ + + V+N+ T + V FE +R P + +I+T SDDM + +++++
Sbjct: 71 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 130
Query: 89 LERFHS-FEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQQVFEGHTHYVM 146
FE H+ YV + ++P S+ D IK+W + + EGH V
Sbjct: 131 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSS-SPNFTLEGHEKGVN 189
Query: 147 QI-VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISG 205
I + D S + DR VK+W + + TLEGH + V+CV ++ + P +I+G
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHP--ELPIIITG 247
Query: 206 ADDRLVKIWDYQNKTCVQTLESGI 229
++D V+IW TL G+
Sbjct: 248 SEDGTVRIWHSSTYRLESTLNYGM 271
Score = 182 (69.1 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 53/201 (26%), Positives = 93/201 (46%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKS-FEVCDLPVRAAKFVPR-KN 70
A SD ++C +HPT+P++L S + + +W+ + + FE V P+ N
Sbjct: 97 AHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNN 156
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIKLWNW 128
+ S D + V+ + + E H V C+ + +P+L++ +DD L+K+W++
Sbjct: 157 QFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDY 216
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKG 187
+ C Q EGH V + +P + + S D TV++W + TL G E+
Sbjct: 217 QNK-TCVQTLEGHAQNVSCVSFHP-ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMER- 273
Query: 188 VNCVDYYHGGDKPYLISGADD 208
V CV G + L G D+
Sbjct: 274 VWCVASLRGSNNVAL--GYDE 292
Score = 118 (46.6 bits), Expect = 0.00036, P = 0.00036
Identities = 26/118 (22%), Positives = 54/118 (45%)
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW 128
K ++++G+DD V +++Y + E H+ V CV+ HP P ++T S+D +++W+
Sbjct: 199 KPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPELPIIITGSEDGTVRIWH- 257
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + V + NN + D + +LG P +++ + K
Sbjct: 258 SSTYRLESTLNYGMERVWCVASLRGSNNV--ALGYDEGSIIVKLGREEPAMSMDANGK 313
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 198/226 (87%), Positives = 211/226 (93%)
Query: 1 MPLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPV 60
MPLRLDIKRKLTARSDRVK DLHPTEPWMLASLYNG V VWNHET VK+FEVCDLPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDD 120
RAAKFV RKNW+VTG+DDMQ+ VFNYNTLER H FEAHSDY+RC+AVHPTQPF+LTSSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
MLIKLW+W+K W+C QVFEGHTHYVMQIVINPKDNN FASASLDRT+KVWQLGS+SPNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
LEGHEKGVNC+DYY GGDKPYLISGADDRLVKIWDYQNKTCVQTLE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
Score = 202 (76.2 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 55/204 (26%), Positives = 96/204 (47%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W++ + + V+N+ T + V FE +R P + +I+T SDDM + +++++
Sbjct: 71 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 130
Query: 89 LERFHS-FEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQQVFEGHTHYVM 146
FE H+ YV + ++P S+ D IK+W + + EGH V
Sbjct: 131 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSS-SPNFTLEGHEKGVN 189
Query: 147 QI-VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISG 205
I + D S + DR VK+W + + TLEGH + V+C ++ + P +I+G
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP--ELPIIITG 247
Query: 206 ADDRLVKIWDYQNKTCVQTLESGI 229
++D V+IW TL G+
Sbjct: 248 SEDGTVRIWHSSTYRLESTLNYGM 271
Score = 178 (67.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 53/201 (26%), Positives = 92/201 (45%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKS-FEVCDLPVRAAKFVPR-KN 70
A SD ++C +HPT+P++L S + + +W+ + + FE V P+ N
Sbjct: 97 AHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNN 156
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIKLWNW 128
+ S D + V+ + + E H V C+ + +P+L++ +DD L+K+W++
Sbjct: 157 QFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDY 216
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKG 187
+ C Q EGH V +P + + S D TV++W + TL G E+
Sbjct: 217 QNK-TCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMER- 273
Query: 188 VNCVDYYHGGDKPYLISGADD 208
V CV G + L G D+
Sbjct: 274 VWCVASLRGSNNVAL--GYDE 292
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 198/226 (87%), Positives = 211/226 (93%)
Query: 1 MPLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPV 60
MPLRLDIKRKLTARSDRVK DLHPTEPWMLASLYNG V VWNHET VK+FEVCDLPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDD 120
RAAKFV RKNW+VTG+DDMQ+ VFNYNTLER H FEAHSDY+RC+AVHPTQPF+LTSSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
MLIKLW+W+K W+C QVFEGHTHYVMQIVINPKDNN FASASLDRT+KVWQLGS+SPNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
LEGHEKGVNC+DYY GGDKPYLISGADDRLVKIWDYQNKTCVQTLE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
Score = 202 (76.2 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 55/204 (26%), Positives = 96/204 (47%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W++ + + V+N+ T + V FE +R P + +I+T SDDM + +++++
Sbjct: 71 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 130
Query: 89 LERFHS-FEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQQVFEGHTHYVM 146
FE H+ YV + ++P S+ D IK+W + + EGH V
Sbjct: 131 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSS-SPNFTLEGHEKGVN 189
Query: 147 QI-VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISG 205
I + D S + DR VK+W + + TLEGH + V+C ++ + P +I+G
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP--ELPIIITG 247
Query: 206 ADDRLVKIWDYQNKTCVQTLESGI 229
++D V+IW TL G+
Sbjct: 248 SEDGTVRIWHSSTYRLESTLNYGM 271
Score = 178 (67.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 53/201 (26%), Positives = 92/201 (45%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKS-FEVCDLPVRAAKFVPR-KN 70
A SD ++C +HPT+P++L S + + +W+ + + FE V P+ N
Sbjct: 97 AHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNN 156
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIKLWNW 128
+ S D + V+ + + E H V C+ + +P+L++ +DD L+K+W++
Sbjct: 157 QFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDY 216
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKG 187
+ C Q EGH V +P + + S D TV++W + TL G E+
Sbjct: 217 QNK-TCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMER- 273
Query: 188 VNCVDYYHGGDKPYLISGADD 208
V CV G + L G D+
Sbjct: 274 VWCVASLRGSNNVAL--GYDE 292
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 198/226 (87%), Positives = 211/226 (93%)
Query: 1 MPLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPV 60
MPLRLDIKRKLTARSDRVK DLHPTEPWMLASLYNG V VWNHET VK+FEVCDLPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDD 120
RAAKFV RKNW+VTG+DDMQ+ VFNYNTLER H FEAHSDY+RC+AVHPTQPF+LTSSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
MLIKLW+W+K W+C QVFEGHTHYVMQIVINPKDNN FASASLDRT+KVWQLGS+SPNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
LEGHEKGVNC+DYY GGDKPYLISGADDRLVKIWDYQNKTCVQTLE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
Score = 202 (76.2 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 55/204 (26%), Positives = 96/204 (47%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W++ + + V+N+ T + V FE +R P + +I+T SDDM + +++++
Sbjct: 71 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 130
Query: 89 LERFHS-FEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQQVFEGHTHYVM 146
FE H+ YV + ++P S+ D IK+W + + EGH V
Sbjct: 131 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSS-SPNFTLEGHEKGVN 189
Query: 147 QI-VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISG 205
I + D S + DR VK+W + + TLEGH + V+C ++ + P +I+G
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP--ELPIIITG 247
Query: 206 ADDRLVKIWDYQNKTCVQTLESGI 229
++D V+IW TL G+
Sbjct: 248 SEDGTVRIWHSSTYRLESTLNYGM 271
Score = 178 (67.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 53/201 (26%), Positives = 92/201 (45%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKS-FEVCDLPVRAAKFVPR-KN 70
A SD ++C +HPT+P++L S + + +W+ + + FE V P+ N
Sbjct: 97 AHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNN 156
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIKLWNW 128
+ S D + V+ + + E H V C+ + +P+L++ +DD L+K+W++
Sbjct: 157 QFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDY 216
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKG 187
+ C Q EGH V +P + + S D TV++W + TL G E+
Sbjct: 217 QNK-TCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMER- 273
Query: 188 VNCVDYYHGGDKPYLISGADD 208
V CV G + L G D+
Sbjct: 274 VWCVASLRGSNNVAL--GYDE 292
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 198/226 (87%), Positives = 211/226 (93%)
Query: 1 MPLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPV 60
MPLRLDIKRKLTARSDRVK DLHPTEPWMLASLYNG V VWNHET VK+FEVCDLPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDD 120
RAAKFV RKNW+VTG+DDMQ+ VFNYNTLER H FEAHSDY+RC+AVHPTQPF+LTSSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
MLIKLW+W+K W+C QVFEGHTHYVMQIVINPKDNN FASASLDRT+KVWQLGS+SPNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
LEGHEKGVNC+DYY GGDKPYLISGADDRLVKIWDYQNKTCVQTLE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
Score = 202 (76.2 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 55/204 (26%), Positives = 96/204 (47%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W++ + + V+N+ T + V FE +R P + +I+T SDDM + +++++
Sbjct: 71 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 130
Query: 89 LERFHS-FEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQQVFEGHTHYVM 146
FE H+ YV + ++P S+ D IK+W + + EGH V
Sbjct: 131 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSS-SPNFTLEGHEKGVN 189
Query: 147 QI-VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISG 205
I + D S + DR VK+W + + TLEGH + V+C ++ + P +I+G
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP--ELPIIITG 247
Query: 206 ADDRLVKIWDYQNKTCVQTLESGI 229
++D V+IW TL G+
Sbjct: 248 SEDGTVRIWHSSTYRLESTLNYGM 271
Score = 178 (67.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 53/201 (26%), Positives = 92/201 (45%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKS-FEVCDLPVRAAKFVPR-KN 70
A SD ++C +HPT+P++L S + + +W+ + + FE V P+ N
Sbjct: 97 AHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNN 156
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIKLWNW 128
+ S D + V+ + + E H V C+ + +P+L++ +DD L+K+W++
Sbjct: 157 QFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDY 216
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKG 187
+ C Q EGH V +P + + S D TV++W + TL G E+
Sbjct: 217 QNK-TCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMER- 273
Query: 188 VNCVDYYHGGDKPYLISGADD 208
V CV G + L G D+
Sbjct: 274 VWCVASLRGSNNVAL--GYDE 292
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 198/226 (87%), Positives = 211/226 (93%)
Query: 1 MPLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPV 60
MPLRLDIKRKLTARSDRVK DLHPTEPWMLASLYNG V VWNHET VK+FEVCDLPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDD 120
RAAKFV RKNW+VTG+DDMQ+ VFNYNTLER H FEAHSDY+RC+AVHPTQPF+LTSSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
MLIKLW+W+K W+C QVFEGHTHYVMQIVINPKDNN FASASLDRT+KVWQLGS+SPNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
LEGHEKGVNC+DYY GGDKPYLISGADDRLVKIWDYQNKTCVQTLE
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
Score = 202 (76.2 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 55/204 (26%), Positives = 96/204 (47%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W++ + + V+N+ T + V FE +R P + +I+T SDDM + +++++
Sbjct: 71 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 130
Query: 89 LERFHS-FEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQQVFEGHTHYVM 146
FE H+ YV + ++P S+ D IK+W + + EGH V
Sbjct: 131 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSS-SPNFTLEGHEKGVN 189
Query: 147 QI-VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISG 205
I + D S + DR VK+W + + TLEGH + V+C ++ + P +I+G
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP--ELPIIITG 247
Query: 206 ADDRLVKIWDYQNKTCVQTLESGI 229
++D V+IW TL G+
Sbjct: 248 SEDGTVRIWHSSTYRLESTLNYGM 271
Score = 178 (67.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 53/201 (26%), Positives = 92/201 (45%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKS-FEVCDLPVRAAKFVPR-KN 70
A SD ++C +HPT+P++L S + + +W+ + + FE V P+ N
Sbjct: 97 AHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNN 156
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIKLWNW 128
+ S D + V+ + + E H V C+ + +P+L++ +DD L+K+W++
Sbjct: 157 QFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDY 216
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKG 187
+ C Q EGH V +P + + S D TV++W + TL G E+
Sbjct: 217 QNK-TCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMER- 273
Query: 188 VNCVDYYHGGDKPYLISGADD 208
V CV G + L G D+
Sbjct: 274 VWCVASLRGSNNVAL--GYDE 292
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 1098 (391.6 bits), Expect = 3.3e-111, P = 3.3e-111
Identities = 194/226 (85%), Positives = 211/226 (93%)
Query: 1 MPLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPV 60
MPLRLDIKRKLTARSDRVK DLHP+EPWMLASLYNG V VWNHET VK+FEVCDLPV
Sbjct: 1 MPLRLDIKRKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDD 120
RA+KFV RKNW++TG+DDMQ+ VFNYNTLER H FEAHSDY+RC+AVHPTQP++LTSSDD
Sbjct: 61 RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD 120
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
MLIKLW+WEK W+C QVFEGHTHYVMQIVINPKDNN FASASLDRT+KVWQLGS+SPNFT
Sbjct: 121 MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
LEGH+KGVNC+DYY GGDKPYLISGADDRLVKIWDYQNKTCVQTLE
Sbjct: 181 LEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
Score = 208 (78.3 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 56/204 (27%), Positives = 97/204 (47%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W++ + + V+N+ T + V FE +R P + +I+T SDDM + ++++
Sbjct: 71 WVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEK 130
Query: 89 LERFHS-FEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQQVFEGHTHYVM 146
FE H+ YV + ++P S+ D IK+W + + EGH V
Sbjct: 131 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSS-SPNFTLEGHDKGVN 189
Query: 147 QI-VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISG 205
I + D S + DR VK+W + + TLEGH + V+CV+++ + P +I+G
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHP--ELPIIITG 247
Query: 206 ADDRLVKIWDYQNKTCVQTLESGI 229
++D V+IW TL G+
Sbjct: 248 SEDGTVRIWHSSTYRLESTLNYGM 271
Score = 186 (70.5 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 54/201 (26%), Positives = 93/201 (46%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKS-FEVCDLPVRAAKFVPR-KN 70
A SD ++C +HPT+P++L S + + +W+ E + FE V P+ N
Sbjct: 97 AHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNN 156
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIKLWNW 128
+ S D + V+ + + E H V C+ + +P+L++ +DD L+K+W++
Sbjct: 157 QFASASLDRTIKVWQLGSSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDY 216
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKG 187
+ C Q EGH V + +P + + S D TV++W + TL G E+
Sbjct: 217 QNK-TCVQTLEGHAQNVSCVNFHP-ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMER- 273
Query: 188 VNCVDYYHGGDKPYLISGADD 208
V CV G + L G D+
Sbjct: 274 VWCVSGLRGSNSVAL--GYDE 292
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
Identities = 196/226 (86%), Positives = 209/226 (92%)
Query: 1 MPLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPV 60
MPLRLDIKRKLTA SDRVK DLHPTEPWMLASLYNG V VWNHET VK+FEVCDLPV
Sbjct: 1 MPLRLDIKRKLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV 60
Query: 61 RAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDD 120
RAAKFV RKNW+VTG+DDMQ+ VFNYNTLER H FEAHSDY+RC+AVHPTQPF+LTSSDD
Sbjct: 61 RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD 120
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
MLIKLW+W+K W+C QVFEGHTHYVMQIVINPKDNN FASASLDRT+KVWQLGS+SPNFT
Sbjct: 121 MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT 180
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
LEGHEKGVNC+DYY GGDKPYLISGADDRLVKIWDYQNKTCVQT E
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTPE 226
Score = 194 (73.4 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 54/204 (26%), Positives = 95/204 (46%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W++ + + V+N+ T + V FE +R P + +I+T SDDM + +++++
Sbjct: 71 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 130
Query: 89 LERFHS-FEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQQVFEGHTHYVM 146
FE H+ YV + ++P S+ D IK+W + + EGH V
Sbjct: 131 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSS-SPNFTLEGHEKGVN 189
Query: 147 QI-VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISG 205
I + D S + DR VK+W + + T EGH + V+C ++ + P +I+G
Sbjct: 190 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHP--ELPIIITG 247
Query: 206 ADDRLVKIWDYQNKTCVQTLESGI 229
++D V+IW TL G+
Sbjct: 248 SEDGTVRIWHSSTYRLESTLNYGM 271
Score = 176 (67.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 53/201 (26%), Positives = 92/201 (45%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKS-FEVCDLPVRAAKFVPR-KN 70
A SD ++C +HPT+P++L S + + +W+ + + FE V P+ N
Sbjct: 97 AHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNN 156
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIKLWNW 128
+ S D + V+ + + E H V C+ + +P+L++ +DD L+K+W++
Sbjct: 157 QFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDY 216
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKG 187
+ C Q EGH V +P + + S D TV++W + TL G E+
Sbjct: 217 QNK-TCVQTPEGHAQNVSCATFHP-ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMER- 273
Query: 188 VNCVDYYHGGDKPYLISGADD 208
V CV G + L G D+
Sbjct: 274 VWCVASLRGSNNVAL--GYDE 292
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 1093 (389.8 bits), Expect = 1.1e-110, P = 1.1e-110
Identities = 193/226 (85%), Positives = 209/226 (92%)
Query: 1 MPLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPV 60
MPL+LDIKR+LT+RSDRVKC DLHP EPWML +LYNGHVH+ N+E Q VK FEVCD+PV
Sbjct: 1 MPLKLDIKRRLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPV 60
Query: 61 RAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDD 120
R+A+FV RKNWI+TGSDDMQ+ VFNYNTLE+ HSFEAHSDY+RC+AVHPTQP +LTSSDD
Sbjct: 61 RSARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDD 120
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
MLIKLWNWEK WACQ+VFEGHTHYVMQIV NPKDNNTFASASLDRTVKVWQLGS NFT
Sbjct: 121 MLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFANFT 180
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE
Sbjct: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
Score = 200 (75.5 bits), Expect = 9.1e-15, P = 9.1e-15
Identities = 54/200 (27%), Positives = 97/200 (48%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W+L + + V+N+ T + V SFE +R P + ++T SDDM + ++N+
Sbjct: 71 WILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEK 130
Query: 89 LERFHS-FEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQQVFEGHTHYVM 146
+ FE H+ YV + +P S+ D +K+W +A EGH V
Sbjct: 131 MWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFA-NFTLEGHEKGVN 189
Query: 147 QI-VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISG 205
+ + D S + DR VK+W + + TLEGH + ++ V ++ + P +++G
Sbjct: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHP--ELPIVLTG 247
Query: 206 ADDRLVKIWD---YQNKTCV 222
++D V+IW Y+ +TC+
Sbjct: 248 SEDGTVRIWHSGTYRLETCL 267
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 1026 (366.2 bits), Expect = 1.4e-103, P = 1.4e-103
Identities = 177/226 (78%), Positives = 203/226 (89%)
Query: 1 MPLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPV 60
MPLRLD+KRKL ARSDRVKC DLHP E W+LA+LYNG+VH+WN+ET VKSFEVCD+PV
Sbjct: 1 MPLRLDVKRKLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPV 60
Query: 61 RAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDD 120
RAAKFVPRK+W+VTGSDDM + VFNYNTLER H FEAHSDY+R + VHPT P++++SSDD
Sbjct: 61 RAAKFVPRKSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDD 120
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
ML+K+W+W+ WA +Q FEGHTHYVMQI INPKDNNTFA+ASLD+TVKVWQ GS PNFT
Sbjct: 121 MLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFT 180
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
LEGHEKGVNCVDYYHGG+KPY+ISGADD LVKIWDYQNKTCVQTL+
Sbjct: 181 LEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTLD 226
Score = 205 (77.2 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 55/215 (25%), Positives = 102/215 (47%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSD 77
V+ P + W++ + H+ V+N+ T + V FE +R+ P ++++ SD
Sbjct: 60 VRAAKFVPRKSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSD 119
Query: 78 DMQVCVFNY-NTLERFHSFEAHSDYVRCVAVHPTQP-FLLTSSDDMLIKLWNWEKAWACQ 135
DM V ++++ N SFE H+ YV +A++P T+S D +K+W +
Sbjct: 120 DMLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSN-VPN 178
Query: 136 QVFEGHTHYVMQI-VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYY 194
EGH V + + + S + D VK+W + + TL+GH + V+ V ++
Sbjct: 179 FTLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFH 238
Query: 195 HGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ P +I+G++D V++W TL G+
Sbjct: 239 P--ELPLIITGSEDSTVRLWHANTYRLETTLNYGL 271
Score = 178 (67.7 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 52/199 (26%), Positives = 94/199 (47%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVK-SFEVCDLPVRAA 63
L+ + A SD ++ +HPT P++++S + V +W+ + +K SFE V
Sbjct: 89 LERVHQFEAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQI 148
Query: 64 KFVPR-KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHP--TQPFLLTSSDD 120
P+ N T S D V V+ + + + E H V CV + +P++++ +DD
Sbjct: 149 AINPKDNNTFATASLDKTVKVWQFGSNVPNFTLEGHEKGVNCVDYYHGGEKPYIISGADD 208
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
L+K+W+++ C Q +GH V + +P + + S D TV++W + T
Sbjct: 209 HLVKIWDYQNK-TCVQTLDGHAQNVSSVCFHP-ELPLIITGSEDSTVRLWHANTYRLETT 266
Query: 181 LE-GHEKGVNCVDYYHGGD 198
L G E+ V C+ G +
Sbjct: 267 LNYGLER-VWCIQAQKGAN 284
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
Identities = 171/197 (86%), Positives = 184/197 (93%)
Query: 30 MLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTL 89
MLASLYNG V VWNHET VK+FEVCDLPVRAAKFV RKNW+VTG+DDMQ+ VFNYNTL
Sbjct: 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTL 60
Query: 90 ERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIV 149
ER H FEAHSDY+RC+AVHPTQPF+LTSSDDMLIKLW+W+K W+C QVFEGHTHYVMQIV
Sbjct: 61 ERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIV 120
Query: 150 INPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDR 209
INPKDNN FASASLDRT+KVWQLGS+SPNFTLEGHEKGVNC+DYY GGDKPYLISGADDR
Sbjct: 121 INPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDR 180
Query: 210 LVKIWDYQNKTCVQTLE 226
LVKIWDYQNKTCVQTLE
Sbjct: 181 LVKIWDYQNKTCVQTLE 197
Score = 202 (76.2 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 55/204 (26%), Positives = 96/204 (47%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W++ + + V+N+ T + V FE +R P + +I+T SDDM + +++++
Sbjct: 42 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 101
Query: 89 LERFHS-FEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQQVFEGHTHYVM 146
FE H+ YV + ++P S+ D IK+W + + EGH V
Sbjct: 102 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSS-SPNFTLEGHEKGVN 160
Query: 147 QI-VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISG 205
I + D S + DR VK+W + + TLEGH + V+C ++ + P +I+G
Sbjct: 161 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP--ELPIIITG 218
Query: 206 ADDRLVKIWDYQNKTCVQTLESGI 229
++D V+IW TL G+
Sbjct: 219 SEDGTVRIWHSSTYRLESTLNYGM 242
Score = 178 (67.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 53/201 (26%), Positives = 92/201 (45%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKS-FEVCDLPVRAAKFVPR-KN 70
A SD ++C +HPT+P++L S + + +W+ + + FE V P+ N
Sbjct: 68 AHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNN 127
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIKLWNW 128
+ S D + V+ + + E H V C+ + +P+L++ +DD L+K+W++
Sbjct: 128 QFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDY 187
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKG 187
+ C Q EGH V +P + + S D TV++W + TL G E+
Sbjct: 188 QNK-TCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMER- 244
Query: 188 VNCVDYYHGGDKPYLISGADD 208
V CV G + L G D+
Sbjct: 245 VWCVASLRGSNNVAL--GYDE 263
Score = 114 (45.2 bits), Expect = 0.00076, P = 0.00076
Identities = 25/118 (21%), Positives = 53/118 (44%)
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW 128
K ++++G+DD V +++Y + E H+ V C + HP P ++T S+D +++W+
Sbjct: 170 KPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH- 228
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + V + NN + D + +LG P +++ + K
Sbjct: 229 SSTYRLESTLNYGMERVWCVASLRGSNNV--ALGYDEGSIIVKLGREEPAMSMDANGK 284
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
Identities = 171/197 (86%), Positives = 184/197 (93%)
Query: 30 MLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTL 89
MLASLYNG V VWNHET VK+FEVCDLPVRAAKFV RKNW+VTG+DDMQ+ VFNYNTL
Sbjct: 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTL 60
Query: 90 ERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIV 149
ER H FEAHSDY+RC+AVHPTQPF+LTSSDDMLIKLW+W+K W+C QVFEGHTHYVMQIV
Sbjct: 61 ERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIV 120
Query: 150 INPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDR 209
INPKDNN FASASLDRT+KVWQLGS+SPNFTLEGHEKGVNC+DYY GGDKPYLISGADDR
Sbjct: 121 INPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDR 180
Query: 210 LVKIWDYQNKTCVQTLE 226
LVKIWDYQNKTCVQTLE
Sbjct: 181 LVKIWDYQNKTCVQTLE 197
Score = 202 (76.2 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 55/204 (26%), Positives = 96/204 (47%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W++ + + V+N+ T + V FE +R P + +I+T SDDM + +++++
Sbjct: 42 WVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 101
Query: 89 LERFHS-FEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQQVFEGHTHYVM 146
FE H+ YV + ++P S+ D IK+W + + EGH V
Sbjct: 102 KWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSS-SPNFTLEGHEKGVN 160
Query: 147 QI-VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISG 205
I + D S + DR VK+W + + TLEGH + V+C ++ + P +I+G
Sbjct: 161 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP--ELPIIITG 218
Query: 206 ADDRLVKIWDYQNKTCVQTLESGI 229
++D V+IW TL G+
Sbjct: 219 SEDGTVRIWHSSTYRLESTLNYGM 242
Score = 178 (67.7 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 53/201 (26%), Positives = 92/201 (45%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKS-FEVCDLPVRAAKFVPR-KN 70
A SD ++C +HPT+P++L S + + +W+ + + FE V P+ N
Sbjct: 68 AHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNN 127
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIKLWNW 128
+ S D + V+ + + E H V C+ + +P+L++ +DD L+K+W++
Sbjct: 128 QFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDY 187
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKG 187
+ C Q EGH V +P + + S D TV++W + TL G E+
Sbjct: 188 QNK-TCVQTLEGHAQNVSCASFHP-ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMER- 244
Query: 188 VNCVDYYHGGDKPYLISGADD 208
V CV G + L G D+
Sbjct: 245 VWCVASLRGSNNVAL--GYDE 263
Score = 114 (45.2 bits), Expect = 0.00098, P = 0.00098
Identities = 25/118 (21%), Positives = 53/118 (44%)
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW 128
K ++++G+DD V +++Y + E H+ V C + HP P ++T S+D +++W+
Sbjct: 170 KPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH- 228
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + V + NN + D + +LG P +++ + K
Sbjct: 229 SSTYRLESTLNYGMERVWCVASLRGSNNV--ALGYDEGSIIVKLGREEPAMSMDANGK 284
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
Identities = 153/225 (68%), Positives = 189/225 (84%)
Query: 2 PLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVR 61
PLRL+IKRK RS+RVK DLHPTEPW+LASLY+G + +WN++T VKSF+V +LPVR
Sbjct: 217 PLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVR 276
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
+AKF+ RK W+V G+DDM + V+NYNT+++ FEAH+DY+RCVAVHPT P++L+SSDDM
Sbjct: 277 SAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDM 336
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL 181
LIKLW+WEK W C Q+FEGH+HYVMQ+ NPKD NTFASASLDRT+K+W LGS PNFTL
Sbjct: 337 LIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL 396
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ H KGVNCVDY+ GGDKPYLI+G+DD K+WDYQ K+CVQTLE
Sbjct: 397 DAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLE 441
Score = 186 (70.5 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 57/205 (27%), Positives = 92/205 (44%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W++A + + V+N+ T +K FE +R P ++++ SDDM + ++++
Sbjct: 286 WVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 345
Query: 89 -LERFHSFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYV 145
FE HS YV V +P T F ++S D IK+WN + H V
Sbjct: 346 GWLCTQIFEGHSHYVMQVTFNPKDTNTFA-SASLDRTIKIWNLGSPDP-NFTLDAHLKGV 403
Query: 146 MQI-VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLIS 204
+ D + S D T KVW + S TLEGH V+ V ++ + P +I+
Sbjct: 404 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHP--ELPIIIT 461
Query: 205 GADDRLVKIWDYQNKTCVQTLESGI 229
G++D V+IW TL G+
Sbjct: 462 GSEDGTVRIWHATTYRLENTLNYGL 486
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 156/227 (68%), Positives = 193/227 (85%)
Query: 1 MPLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVC-DLP 59
MPLRLDIK+KL+ RSDRVK D+HPTEPW+LASLY+G+V++WN+ET VKSFEV + P
Sbjct: 1 MPLRLDIKKKLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNP 60
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
VR A+F+ +K WIVTGSDD + V+NYNT+E+ SFEAH+DY+RC+ VHPT P++L+SSD
Sbjct: 61 VRTARFIAKKQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSD 120
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
DM IKLW++EK W+ QVFEGH+HYVM I NPKD N FA+ASLD+TVKVW + S P+F
Sbjct: 121 DMFIKLWDYEKGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHF 180
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
TLEGHEKG+N V+Y+ GG+KPYLISGADD+LVKIWDYQ+KTCVQTLE
Sbjct: 181 TLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLE 227
Score = 216 (81.1 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 58/205 (28%), Positives = 99/205 (48%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W++ + ++ V+N+ T + +KSFE +R P +I++ SDDM + +++Y
Sbjct: 72 WIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEK 131
Query: 89 -LERFHSFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYV 145
FE HS YV +A +P T F T+S D +K+W+ EGH +
Sbjct: 132 GWSNTQVFEGHSHYVMSIAWNPKDTNQFA-TASLDKTVKVWSINSPHP-HFTLEGHEKGI 189
Query: 146 MQI-VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLIS 204
+ + + S + D+ VK+W S + TLEGH V+ V Y+ + P ++S
Sbjct: 190 NSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHP--ELPLILS 247
Query: 205 GADDRLVKIWDYQNKTCVQTLESGI 229
G++D VK+W +TL G+
Sbjct: 248 GSEDGTVKLWHSSTYRLERTLNYGM 272
Score = 119 (46.9 bits), Expect = 0.00031, P = 0.00031
Identities = 35/159 (22%), Positives = 72/159 (45%)
Query: 26 TEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP--RKNWIVTGSDDMQVCV 83
T + ASL + V VW+ + + E + + + ++ K ++++G+DD V +
Sbjct: 156 TNQFATASL-DKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDKLVKI 214
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
++Y + + E HS+ V V HP P +L+ S+D +KLW+ + ++
Sbjct: 215 WDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWH-SSTYRLERTLNYGMG 273
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE 182
+V + N + F D V ++G P +++
Sbjct: 274 FVWSM--NFLRGSNFIGLGYDDGTVVLKIGKNKPPVSMD 310
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
Identities = 146/225 (64%), Positives = 181/225 (80%)
Query: 3 LRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRA 62
+RLDIKR+L ARS+RVK D HPTEPW+L +LY+GHV++W++ET +K+FE+ D+PVRA
Sbjct: 1 MRLDIKRQLFARSERVKGIDFHPTEPWILTTLYSGHVYIWSYETQSIIKTFELTDVPVRA 60
Query: 63 AKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDML 122
+F+ RKNWIV GSDD Q+ ++NYNT E+ SFEAH DY+R +AVHPTQPF+LT+SDDM
Sbjct: 61 GRFIARKNWIVCGSDDFQLRIYNYNTSEKIASFEAHPDYIRSIAVHPTQPFVLTASDDMT 120
Query: 123 IKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE 182
IKLW+WEK W C QV+EGH+HYVM + INPKD NTFASA LDRTVK+W LGS NFTLE
Sbjct: 121 IKLWDWEKGWKCVQVYEGHSHYVMGLAINPKDTNTFASACLDRTVKIWSLGSPHANFTLE 180
Query: 183 GHE-KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
HE KGVN VDYY DKPYL++ +DD+ VK+WDY K + TLE
Sbjct: 181 AHETKGVNHVDYYPQADKPYLLTTSDDKTVKVWDYTTKALIATLE 225
Score = 213 (80.0 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 56/205 (27%), Positives = 101/205 (49%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W++ + + ++N+ T++ + SFE +R+ P + +++T SDDM + ++++
Sbjct: 69 WIVCGSDDFQLRIYNYNTSEKIASFEAHPDYIRSIAVHPTQPFVLTASDDMTIKLWDWEK 128
Query: 89 -LERFHSFEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQQVFEGH-THYV 145
+ +E HS YV +A++P S+ D +K+W+ A E H T V
Sbjct: 129 GWKCVQVYEGHSHYVMGLAINPKDTNTFASACLDRTVKIWSLGSPHA-NFTLEAHETKGV 187
Query: 146 MQIVINPK-DNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLIS 204
+ P+ D + S D+TVKVW + + TLEGH V+ Y+ + P +IS
Sbjct: 188 NHVDYYPQADKPYLLTTSDDKTVKVWDYTTKALIATLEGHTSNVSFACYHP--ELPVIIS 245
Query: 205 GADDRLVKIWDYQNKTCVQTLESGI 229
G++D +KIW Q+L G+
Sbjct: 246 GSEDGTIKIWHANTYRLEQSLSYGL 270
Score = 159 (61.0 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 56/207 (27%), Positives = 93/207 (44%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQN-VKSFEVCDLPVRAAKFVPRK-N 70
A D ++ +HPT+P++L + + + +W+ E V+ +E V P+ N
Sbjct: 95 AHPDYIRSIAVHPTQPFVLTASDDMTIKLWDWEKGWKCVQVYEGHSHYVMGLAINPKDTN 154
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDY-VRCVAVHPT--QPFLLTSSDDMLIKLWN 127
+ D V +++ + + EAH V V +P +P+LLT+SDD +K+W+
Sbjct: 155 TFASACLDRTVKIWSLGSPHANFTLEAHETKGVNHVDYYPQADKPYLLTTSDDKTVKVWD 214
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEK 186
+ A EGHT V +P + S S D T+K+W + +L G E+
Sbjct: 215 YTTK-ALIATLEGHTSNVSFACYHP-ELPVIISGSEDGTIKIWHANTYRLEQSLSYGLER 272
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKI 213
CV Y G K + G DD V +
Sbjct: 273 AW-CVSYQRG--KQGVALGFDDGAVVV 296
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
Identities = 139/225 (61%), Positives = 175/225 (77%)
Query: 3 LRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRA 62
++LD+ ++ + RSDRVK D HPTEPW+L +LYNG + +W++ TN VKS +V +LPVRA
Sbjct: 1 MKLDVVKQFSTRSDRVKGIDFHPTEPWILTTLYNGKIEIWSYATNSLVKSIQVTELPVRA 60
Query: 63 AKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDML 122
KF+ RKNWIV GSDD Q+ V+NYNT E+ FEAH DY+R +AVHP++P++LTSSDD+
Sbjct: 61 GKFIARKNWIVVGSDDFQIRVYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYILTSSDDLT 120
Query: 123 IKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE 182
IKLWNW+ W +Q FEGH HYVM + NPKD NTFASA LDRTVK+W LGS+ PNFTL
Sbjct: 121 IKLWNWDHNWKLEQTFEGHQHYVMSVNFNPKDPNTFASACLDRTVKIWSLGSSQPNFTLI 180
Query: 183 GHE-KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
HE KGVN VDYY DKPYLI+ +DD+ +K+WDYQ K+CV TLE
Sbjct: 181 AHEAKGVNYVDYYPQADKPYLITSSDDKTIKVWDYQTKSCVATLE 225
Score = 200 (75.5 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 50/190 (26%), Positives = 93/190 (48%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W++ + + V+N+ T + V FE +R+ P K +I+T SDD+ + ++N++
Sbjct: 69 WIVVGSDDFQIRVYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYILTSSDDLTIKLWNWDH 128
Query: 89 LERFH-SFEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQQVFEGHTHYVM 146
+ +FE H YV V +P P S+ D +K+W+ + + V
Sbjct: 129 NWKLEQTFEGHQHYVMSVNFNPKDPNTFASACLDRTVKIWSLGSSQPNFTLIAHEAKGVN 188
Query: 147 QIVINPK-DNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISG 205
+ P+ D ++S D+T+KVW + S TLEGH V+ +H + P ++SG
Sbjct: 189 YVDYYPQADKPYLITSSDDKTIKVWDYQTKSCVATLEGHLSNVSFA-IFHP-ELPIIVSG 246
Query: 206 ADDRLVKIWD 215
++D ++ W+
Sbjct: 247 SEDGTIRFWN 256
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 48/199 (24%), Positives = 85/199 (42%)
Query: 18 VKCCDLHPTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV---PR--KNW 71
V + +P +P AS + V +W+ ++Q +F + + +V P+ K +
Sbjct: 143 VMSVNFNPKDPNTFASACLDRTVKIWSLGSSQ--PNFTLIAHEAKGVNYVDYYPQADKPY 200
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
++T SDD + V++Y T + E H V HP P +++ S+D I+ WN
Sbjct: 201 LITSSDDKTIKVWDYQTKSCVATLEGHLSNVSFAIFHPELPIIVSGSEDGTIRFWN-SNT 259
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+ ++ I I PK N +A D + +LGS P F+++ + K +
Sbjct: 260 FKLEKSINYSLERAWCIGILPKSN--VIAAGFDSGFVIIKLGSEEPLFSMDSNNKLIYAK 317
Query: 192 --DYYHGGDKPYLISGADD 208
+ Y KP G D
Sbjct: 318 NSEVYQSVIKPSSSEGLKD 336
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 136/224 (60%), Positives = 170/224 (75%)
Query: 3 LRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRA 62
+RLD +RKL + ++RVK D HPTEPW++AS YNG V +WN+ T V+SF++ D+P+RA
Sbjct: 2 MRLDFQRKLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRA 61
Query: 63 AKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDML 122
F+ RKNW V GSDD QV V+NYNT E+ FEAH DY+R + VHPTQPFLLTSSDDM
Sbjct: 62 CAFIARKNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMT 121
Query: 123 IKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE 182
IK +NW+ +W C Q FEGH+ YVM + INPKD NTFAS+ LD TVKVW GS+ NFTL+
Sbjct: 122 IKCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQ 181
Query: 183 GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
H++GVN V+YY GDKPYLI+ DD L+K+WDYQ K CV+ LE
Sbjct: 182 AHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILE 225
Score = 216 (81.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 56/200 (28%), Positives = 97/200 (48%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSD 77
++ C + W + + V V+N+ T + V FE +RA P + +++T SD
Sbjct: 59 IRACAFIARKNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSD 118
Query: 78 DMQVCVFNYN-TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQ 135
DM + FN++ + + +FE HS YV +A++P SS D +K+W++ + A
Sbjct: 119 DMTIKCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVA-N 177
Query: 136 QVFEGHTHYVMQIVINPKDNNTFA-SASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYY 194
+ H V + P + + +A D +KVW + + LEGH V+ ++
Sbjct: 178 FTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFA-FF 236
Query: 195 HGGDKPYLISGADDRLVKIW 214
H P +ISG++D VKIW
Sbjct: 237 HS-KFPIIISGSEDGTVKIW 255
Score = 164 (62.8 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
V+A F P + W++ + QV ++NYNT SF+ + +R A + + + SD
Sbjct: 17 VKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIARKNWFVCGSD 76
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKV--WQLGSASP 177
D ++++N+ Q FE H Y+ +V++P S+ D T+K W +
Sbjct: 77 DFQVRVYNYNTGEKVTQ-FEAHPDYIRALVVHPTQPFLLTSSD-DMTIKCFNWDMSWKCV 134
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
T EGH + V + + D S D VK+W + + TL++
Sbjct: 135 Q-TFEGHSRYVMSLAI-NPKDTNTFASSCLDGTVKVWSFGSSVANFTLQA 182
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 36/159 (22%), Positives = 70/159 (44%)
Query: 32 ASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR--KNWIVTGSDDMQVCVFNYNTL 89
+S +G V VW+ ++ + + D V + P K +++T DD + V++Y T
Sbjct: 159 SSCLDGTVKVWSFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTK 218
Query: 90 ERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIV 149
E H++ V H P +++ S+D +K+W+ +++ + + I
Sbjct: 219 ACVRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIWH-TLSYSLIKSYNFSLDRAWCIA 277
Query: 150 INPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
N KDN + D + + LG P+ T++ K V
Sbjct: 278 QN-KDNG-LVTVGFDNGLITFSLGRDEPSVTMDSSGKVV 314
>SGD|S000003105 [details] [associations]
symbol:SEC27 "Essential beta'-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IMP;IPI] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IGI;ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IMP] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003105 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 GO:GO:0043130
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG OrthoDB:EOG48H0BF
GO:GO:0032511 EMBL:U11237 EMBL:X92670 EMBL:Z72659 PIR:B55123
RefSeq:NP_011378.1 PDB:2YNN PDB:2YNO PDB:2YNP PDBsum:2YNN
PDBsum:2YNO PDBsum:2YNP ProteinModelPortal:P41811 SMR:P41811
DIP:DIP-6468N IntAct:P41811 MINT:MINT-428887 STRING:P41811
PaxDb:P41811 PeptideAtlas:P41811 EnsemblFungi:YGL137W GeneID:852740
KEGG:sce:YGL137W CYGD:YGL137w NextBio:972153 Genevestigator:P41811
GermOnline:YGL137W Uniprot:P41811
Length = 889
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 135/225 (60%), Positives = 172/225 (76%)
Query: 3 LRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRA 62
++LDIK+ + RSDRVK D HPTEPW+L +LY+G V +WN+ET V+S +V + PVRA
Sbjct: 1 MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRA 60
Query: 63 AKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDML 122
KF+ RKNWI+ GSDD ++ VFNYNT E+ FEAH DY+R +AVHPT+P++L+ SDD+
Sbjct: 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT 120
Query: 123 IKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE 182
+KLWNWE WA +Q FEGH H+VM + NPKD +TFAS LDRTVKVW LG ++PNFTL
Sbjct: 121 VKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT 180
Query: 183 -GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
G E+GVN VDYY DKPY+I+ +DD +KIWDYQ K+CV TLE
Sbjct: 181 TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE 225
Score = 230 (86.0 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 59/204 (28%), Positives = 99/204 (48%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNY-N 87
W++ + + V+N+ T + V FE +R+ P K ++++GSDD+ V ++N+ N
Sbjct: 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN 128
Query: 88 TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQQVFEGHTHYVM 146
+FE H +V CVA +P P S D +K+W+ ++ + G V
Sbjct: 129 NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVN 188
Query: 147 QIVINP-KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISG 205
+ P D +AS D T+K+W + S TLEGH V+ +H P +ISG
Sbjct: 189 YVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFA-VFHP-TLPIIISG 246
Query: 206 ADDRLVKIWDYQNKTCVQTLESGI 229
++D +KIW+ +TL G+
Sbjct: 247 SEDGTLKIWNSSTYKVEKTLNVGL 270
Score = 184 (69.8 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 57/202 (28%), Positives = 97/202 (48%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVK-SFEVCDLPVRAAKFVPRK-N 70
A D ++ +HPT+P++L+ + V +WN E N ++ +FE + V F P+ +
Sbjct: 95 AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154
Query: 71 WIVTGSDDMQVCVFNYN-TLERFHSFEAHSDYVRCVAVHPT--QPFLLTSSDDMLIKLWN 127
+G D V V++ + F V V +P +P+++T+SDD+ IK+W+
Sbjct: 155 TFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWD 214
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEK 186
++ +C EGH V V +P S S D T+K+W + TL G E+
Sbjct: 215 YQTK-SCVATLEGHMSNVSFAVFHPT-LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLER 272
Query: 187 GVNCVDYYHGGDKPYLISGADD 208
C+ + G K Y+ SG D+
Sbjct: 273 SW-CIATHPTGRKNYIASGFDN 293
Score = 160 (61.4 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 41/171 (23%), Positives = 74/171 (43%)
Query: 18 VKCCDLHPTEPWMLAS-LYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV-----PRKNW 71
V C +P +P AS + V VW+ Q+ +F + R +V P K +
Sbjct: 143 VMCVAFNPKDPSTFASGCLDRTVKVWS--LGQSTPNFTLTTGQERGVNYVDYYPLPDKPY 200
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
++T SDD+ + +++Y T + E H V HPT P +++ S+D +K+WN
Sbjct: 201 MITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN-SST 259
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE 182
+ ++ I +P + ++ D V LG+ P +L+
Sbjct: 260 YKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLD 310
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 103/215 (47%), Positives = 149/215 (69%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI 72
+ SDRVK D H +PW+L +L+ G+V +WN++T VK+ EV + RAAKF+ RKNWI
Sbjct: 105 SHSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAKFIHRKNWI 164
Query: 73 VTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAW 132
T SDD Q+ +F+ T + F AHSD++R + VHPT P+L+++SDD I++W+WE W
Sbjct: 165 ATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWENEW 224
Query: 133 ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVD 192
+Q F+ H HY+MQI +NP+D F S SLD+T+KVW+LG TLEGHEKGVNCV+
Sbjct: 225 RMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCVE 284
Query: 193 YYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
+ GG ++SG+DD + +WD Q + C++TL++
Sbjct: 285 FLTGGR---IVSGSDDCSICVWDIQTQKCIETLKN 316
Score = 164 (62.8 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 49/193 (25%), Positives = 89/193 (46%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W+ + + + +++ ET + F +R+ P ++++ SDD ++ V+++
Sbjct: 163 WIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWEN 222
Query: 89 LERFHS-FEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNW-EKAWACQQVFEGHTHYV 145
R F+ H+ Y+ +AV+P P + S D +K+W E+ C EGH V
Sbjct: 223 EWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESIC--TLEGHEKGV 280
Query: 146 MQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG-HEKGVNCVDYYHGGDKPYLIS 204
+ S S D ++ VW + + TL+ H+ V V + K ++IS
Sbjct: 281 NCVEF--LTGGRIVSGSDDCSICVWDIQTQKCIETLKNAHKNNVTFVTPF----KTWIIS 334
Query: 205 GADDRLVKIWDYQ 217
GA+D VKIW+ Q
Sbjct: 335 GAEDSTVKIWNSQ 347
Score = 136 (52.9 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 36/128 (28%), Positives = 67/128 (52%)
Query: 94 SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE-KAWA-CQQVFEGHTHYVMQIVIN 151
+F +HSD V+ V H +P++LT+ +++WN++ K +V E T I+
Sbjct: 102 NFVSHSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAK--FIH 159
Query: 152 PKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLV 211
K N A+AS D+ ++++ + S H + + + PYLIS +DDR +
Sbjct: 160 RK--NWIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHP--TLPYLISASDDRKI 215
Query: 212 KIWDYQNK 219
++WD++N+
Sbjct: 216 RVWDWENE 223
Score = 127 (49.8 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 47/183 (25%), Positives = 80/183 (43%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKS-F-EVCDLPVRAAKFVP 67
+ TA SD ++ +HPT P+++++ + + VW+ E ++ F E ++ A
Sbjct: 186 EFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWENEWRMEQEFQEHAHYIMQIAVNPE 245
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
V+GS D + V+ E + E H V CV T +++ SDD I +W+
Sbjct: 246 DPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCVEFL-TGGRIVSGSDDCSICVWD 304
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE---GH 184
+ + + H + V + P + A D TVK+W S F+LE
Sbjct: 305 IQTQKCIETLKNAHKNNVT--FVTPFKTWIISGAE-DSTVKIWN----SQTFSLEKELNF 357
Query: 185 EKG 187
EKG
Sbjct: 358 EKG 360
>DICTYBASE|DDB_G0267982 [details] [associations]
symbol:copA "coatomer protein complex alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
Uniprot:Q55FR9
Length = 1221
Score = 345 (126.5 bits), Expect = 7.4e-37, Sum P(2) = 7.4e-37
Identities = 61/171 (35%), Positives = 99/171 (57%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
K ++ RVK HPT PW+LASL++G +H++++ ++ F+ + PVR F +
Sbjct: 4 KFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFHMTQ 63
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
V+G DD ++ V+NY + + H DY+R V H P++++SSDDM+I++WNW+
Sbjct: 64 PLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIWNWQ 123
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
C GH HYVM + +PKD+ SASLD+T+++W + T
Sbjct: 124 SR-TCIAELNGHNHYVMSALFHPKDD-LVVSASLDQTIRIWDISGLKKKMT 172
Score = 184 (69.8 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 42/163 (25%), Positives = 75/163 (46%)
Query: 53 FEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP 112
FE V+ F P + WI+ + +++Y F+ H VR + H TQP
Sbjct: 5 FETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFHMTQP 64
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
++ DD IK+WN+++ C +GH Y+ + + ++ S+S D +++W
Sbjct: 65 LFVSGGDDYKIKVWNYKQR-RCLFTLKGHKDYIRSVEFH-REAPWIVSSSDDMVIRIWNW 122
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
S + L GH V +H D ++S + D+ ++IWD
Sbjct: 123 QSRTCIAELNGHNHYVMSA-LFHPKDD-LVVSASLDQTIRIWD 163
Score = 173 (66.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 37/133 (27%), Positives = 72/133 (54%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
+ FE + V+ ++ HPT+P++L S I L+++ ++ F+ H V I +
Sbjct: 3 YKFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEK-FDEHEGPVRGINFH- 60
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
F S D +KVW FTL+GH+ + V+++ + P+++S +DD +++
Sbjct: 61 MTQPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHR--EAPWIVSSSDDMVIR 118
Query: 213 IWDYQNKTCVQTL 225
IW++Q++TC+ L
Sbjct: 119 IWNWQSRTCIAEL 131
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 43/144 (29%), Positives = 70/144 (48%)
Query: 46 TNQNVK-SFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRC 104
T+ +V+ S E D V A F P + +IV+ SDD QV ++ N +F H + V C
Sbjct: 192 TDISVRLSLEGHDRGVNWASFHPTQPYIVSASDDHQVKLWRMND-PIVDTFRGHYNNVSC 250
Query: 105 VAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLD 164
HP Q ++++S+D I++W+ K + H + + +P + N FA A D
Sbjct: 251 ALFHPRQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRF-WTLASHP-NQNLFA-AGHD 307
Query: 165 RTVKVWQLGSASPNFTLEGHEKGV 188
+ V++L P F G + GV
Sbjct: 308 SGMIVFKLERERPLFVQNG-DSGV 330
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/127 (26%), Positives = 62/127 (48%)
Query: 47 NQNVKSFEVCDLPVRAAKFVP-RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCV 105
+Q ++ +++ L + P R+N + D++ F + R S E H V
Sbjct: 156 DQTIRIWDISGLKKKMTTVKPYRENDPMRLQDEL----FGTDISVRL-SLEGHDRGVNWA 210
Query: 106 AVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDR 165
+ HPTQP+++++SDD +KLW F GH + V + +P+ + S S D+
Sbjct: 211 SFHPTQPYIVSASDDHQVKLWRMNDPIV--DTFRGHYNNVSCALFHPRQD-LIISNSEDK 267
Query: 166 TVKVWQL 172
T++VW +
Sbjct: 268 TIRVWDI 274
Score = 93 (37.8 bits), Expect = 7.4e-37, Sum P(2) = 7.4e-37
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 176 SPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
S +LEGH++GVN ++ +PY++S +DD VK+W N V T
Sbjct: 195 SVRLSLEGHDRGVNWASFHP--TQPYIVSASDDHQVKLWR-MNDPIVDT 240
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 328 (120.5 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 61/165 (36%), Positives = 95/165 (57%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
K +S+RVK HP PW+LASL++G + +W++ + F+ + PVR F +
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQ 63
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
V+G DD ++ V+NY + H DY+R V H P+++++SDD I++WNW+
Sbjct: 64 PLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
C V GH HYVM +PK++ SASLD+TV+VW +G+
Sbjct: 124 SR-TCVSVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWDIGA 166
Score = 190 (71.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 45/163 (27%), Positives = 76/163 (46%)
Query: 53 FEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP 112
FE V+ F P++ WI+ + +++Y F+ H VR V H +QP
Sbjct: 5 FETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQP 64
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
++ DD IK+WN+ K C GH Y+ + + + SAS D+T+++W
Sbjct: 65 LFVSGGDDYKIKVWNY-KNHRCLFTLLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNW 122
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 123 QSRTCVSVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
Score = 185 (70.2 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 39/131 (29%), Positives = 71/131 (54%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
FE S+ V+ ++ HP +P++L S +I+LW++ + F+ H V + +
Sbjct: 5 FETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDR-FDEHEGPVRGVHFH-NS 62
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
F S D +KVW + FTL GH + V ++H + P+++S +DD+ ++IW
Sbjct: 63 QPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHH--EYPWIVSASDDQTIRIW 120
Query: 215 DYQNKTCVQTL 225
++Q++TCV L
Sbjct: 121 NWQSRTCVSVL 131
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 57 DLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFH--SFEAHSDYVRCVAVHPTQPFL 114
D V A F P IV+G+DD QV ++ N + + + H + V V H Q +
Sbjct: 204 DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDII 263
Query: 115 LTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
+++S+D I++W+ K Q H + + + ++P+ N +A D + V++L
Sbjct: 264 VSNSEDKSIRVWDATKRTGLQTFRREHDRFWI-LAVHPEMN--LLAAGHDSGMIVFKLER 320
Query: 175 ASPNFTLEG 183
P F L G
Sbjct: 321 ERPAFALSG 329
Score = 94 (38.1 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 220
+ LEGH++GVN ++ P ++SGADDR VK+W N+T
Sbjct: 198 YVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWR-MNET 236
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 297 (109.6 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 57/163 (34%), Positives = 93/163 (57%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
K ++S RVK HPT PW+L SL++G + +W++ ++ F+ D PVR F +
Sbjct: 6 KFESKSARVKGISFHPTRPWVLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRGICFHHDQ 65
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
V+G DD ++ V+NY + H DY+R H P+++++SDD +++WNW+
Sbjct: 66 PIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRIWNWQ 125
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
+ + GH HYVM +P ++ ASASLD+TV+VW +
Sbjct: 126 SRNSIA-ILTGHNHYVMCAQFHPTED-LVASASLDQTVRVWDI 166
Score = 190 (71.9 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 46/164 (28%), Positives = 75/164 (45%)
Query: 53 FEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP 112
FE V+ F P + W++T + +++Y F+ H VR + H QP
Sbjct: 7 FESKSARVKGISFHPTRPWVLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRGICFHHDQP 66
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
++ DD IK+WN+++ C GH Y+ + K SAS D+TV++W
Sbjct: 67 IFVSGGDDYKIKVWNYKQK-RCIFTLLGHLDYIRTTFFHHK-YPWIISASDDQTVRIWNW 124
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGAD-DRLVKIWD 215
S + L GH V C ++ D L++ A D+ V++WD
Sbjct: 125 QSRNSIAILTGHNHYVMCAQFHPTED---LVASASLDQTVRVWD 165
Score = 178 (67.7 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 41/131 (31%), Positives = 70/131 (53%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
FE+ S V+ ++ HPT+P++LTS +I+LW++ ++ F+ H V I + D
Sbjct: 7 FESKSARVKGISFHPTRPWVLTSLHSGVIQLWDYRMCVLLEK-FDEHDGPVRGICFH-HD 64
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
F S D +KVW FTL GH + ++H P++IS +DD+ V+IW
Sbjct: 65 QPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHH--KYPWIISASDDQTVRIW 122
Query: 215 DYQNKTCVQTL 225
++Q++ + L
Sbjct: 123 NWQSRNSIAIL 133
Score = 152 (58.6 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 44/164 (26%), Positives = 70/164 (42%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V C HPTE + ++ + V VW+ + +P A P
Sbjct: 133 LTGHNHYVMCAQFHPTEDLVASASLDQTVRVWD------ISGLRKKQMPGGGAPSRP--- 183
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE- 129
TG ++ F H E H V VA H T P L++ SDD +K+W +
Sbjct: 184 ---TGGQQAEL--FGQPDAVVKHVLEGHDRGVNWVAFHHTNPILVSGSDDRQVKIWRYNE 238
Query: 130 -KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
KAW GH + V ++ +P + + S S D++++VW +
Sbjct: 239 TKAWELDSC-RGHYNNVSSVIFHP-NADLILSNSEDKSIRVWDM 280
Score = 119 (46.9 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 25/47 (53%), Positives = 33/47 (70%)
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
LEGH++GVN V ++H P L+SG+DDR VKIW Y N+T L+S
Sbjct: 203 LEGHDRGVNWVAFHH--TNPILVSGSDDRQVKIWRY-NETKAWELDS 246
Score = 103 (41.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/89 (28%), Positives = 44/89 (49%)
Query: 135 QQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE---GHEKGVNCV 191
+ V EGH V + + N S S DR VK+W+ + L+ GH V+ V
Sbjct: 200 KHVLEGHDRGVNWVAFH-HTNPILVSGSDDRQVKIWRYNETKA-WELDSCRGHYNNVSSV 257
Query: 192 DYYHGGDKPYLISGADDRLVKIWDYQNKT 220
++ D ++S ++D+ +++WD Q +T
Sbjct: 258 IFHPNAD--LILSNSEDKSIRVWDMQKRT 284
Score = 74 (31.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 17/81 (20%), Positives = 39/81 (48%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L D ++ H PW++++ + V +WN ++ ++ + V A+F P ++
Sbjct: 91 LLGHLDYIRTTFFHHKYPWIISASDDQTVRIWNWQSRNSIAILTGHNHYVMCAQFHPTED 150
Query: 71 WIVTGSDDMQVCVFNYNTLER 91
+ + S D V V++ + L +
Sbjct: 151 LVASASLDQTVRVWDISGLRK 171
Score = 36 (17.7 bits), Expect = 8.9e-26, Sum P(2) = 8.9e-26
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 201 YLISGADDRLVKI 213
Y ++G D+LVK+
Sbjct: 711 YFVTGNTDKLVKM 723
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 341 (125.1 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 64/168 (38%), Positives = 97/168 (57%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAK 64
+++ K +RS R K HPT+PW+L SL+NG + +W++ + F+ D PVR
Sbjct: 1 MEMLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIA 60
Query: 65 FVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIK 124
F P + V+G DD +V V+NY + + S H DYVR H P++L+ SDD I+
Sbjct: 61 FHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIR 120
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
+WNW+ C + GH+HYVM +P ++ SASLD+TV+VW +
Sbjct: 121 IWNWQSR-NCIAILTGHSHYVMCAAFHPSED-LIVSASLDQTVRVWDI 166
Score = 203 (76.5 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 45/137 (32%), Positives = 73/137 (53%)
Query: 89 LERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQI 148
+E FE+ S + VA HPTQP++LTS + I+LW++ + F+GH V I
Sbjct: 1 MEMLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDR-FDGHDGPVRGI 59
Query: 149 VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADD 208
+P F S D V VW S F+L GH V ++H + P+++S +DD
Sbjct: 60 AFHPTQP-LFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHH--EYPWILSCSDD 116
Query: 209 RLVKIWDYQNKTCVQTL 225
+ ++IW++Q++ C+ L
Sbjct: 117 QTIRIWNWQSRNCIAIL 133
Score = 162 (62.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 56/218 (25%), Positives = 95/218 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L D V+ C H PW+L+ + + +WN ++ + V A F P ++
Sbjct: 91 LCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSED 150
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVA-VHPTQPFLLTSSDDMLIKLWNWE 129
IV+ S D V V++ + L ++ +A H + L S D ++K
Sbjct: 151 LIVSASLDQTVRVWDISGLRMKNAAPVSMSLEDQLAQAHNSISNDLFGSTDAIVKF---- 206
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF---TLEGHEK 186
V EGH V +P SA DR VK+W++ +AS + T GH
Sbjct: 207 -------VLEGHDRGVNWCAFHPT-LPLILSAGDDRLVKLWRM-TASKAWEVDTCRGHFN 257
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
V+C +H + ++S ++D+ +++WD +T VQT
Sbjct: 258 NVSCC-LFHPHQE-LILSASEDKTIRVWDLNRRTAVQT 293
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 338 (124.0 bits), Expect = 2.6e-29, P = 2.6e-29
Identities = 74/205 (36%), Positives = 112/205 (54%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
K +S+RVK HP PW+LASL++G + +W++ + F+ + PVR F +
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQ 63
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
V+G DD ++ V+NY T + H DY+R V H P+++++SDD I++WNW+
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 123
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLG-----SASPNFTLEGH 184
C V GH HYVM +PK++ SASLD+TV+VW +G SASP L
Sbjct: 124 SR-TCISVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWDIGALKKKSASPADDLMRF 181
Query: 185 EKGVNCVDYYHGGDK--PYLISGAD 207
+ +N D + G D Y++ G D
Sbjct: 182 SQ-MNS-DLFGGVDAIVKYVLEGHD 204
Score = 200 (75.5 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 46/163 (28%), Positives = 77/163 (47%)
Query: 53 FEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP 112
FE V+ F P++ WI+ + +++Y F+ H VR V H +QP
Sbjct: 5 FETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQP 64
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
++ DD IK+WN+ K C GH Y+ + + +N SAS D+T+++W
Sbjct: 65 LFVSGGDDYKIKVWNY-KTHRCLFTLLGHLDYIRTVQFH-HENPWIVSASDDQTIRIWNW 122
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 123 QSRTCISVLTGHNHYVMCASFHPKED--LVVSASLDQTVRVWD 163
Score = 186 (70.5 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 38/131 (29%), Positives = 71/131 (54%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
FE S+ V+ ++ HP +P++L S +I+LW++ + F+ H V + +
Sbjct: 5 FETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDR-FDEHEGPVRGVHFH-NS 62
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
F S D +KVW + FTL GH + V ++H + P+++S +DD+ ++IW
Sbjct: 63 QPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHH--ENPWIVSASDDQTIRIW 120
Query: 215 DYQNKTCVQTL 225
++Q++TC+ L
Sbjct: 121 NWQSRTCISVL 131
Score = 133 (51.9 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 41/162 (25%), Positives = 70/162 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V C HP E ++++ + V VW+ + + DL +F +
Sbjct: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDL----MRFSQMNS 186
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW--NW 128
+ G D + Y E H V + HPT P +++ +DD +KLW N
Sbjct: 187 DLFGGVD----AIVKY-------VLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNE 235
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVW 170
KAW + GH + V ++ + K + S S D++++VW
Sbjct: 236 TKAWEVDTL-RGHMNNVSSVMFHAKQD-IIVSNSEDKSIRVW 275
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 57 DLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFH--SFEAHSDYVRCVAVHPTQPFL 114
D V A F P IV+G+DD QV ++ N + + + H + V V H Q +
Sbjct: 204 DRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDII 263
Query: 115 LTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
+++S+D I++W+ K Q H + + + ++P+ N +A D + V++L
Sbjct: 264 VSNSEDKSIRVWDATKRTGIQTFRREHDRFWI-LAVHPEIN--LLAAGHDNGMIVFKLER 320
Query: 175 ASPNFTLEG 183
P F L G
Sbjct: 321 ERPAFALSG 329
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 330 (121.2 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 71/211 (33%), Positives = 111/211 (52%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
K +S RVK HP PW+LASL+NG + +W++ + F+ D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
V+G DD ++ V+NY + H DY+R H P++L++SDD I++WNW+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQ 123
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL-GSASPNFT---LEGHE 185
C V GH HYVM +P ++ SASLD+TV+VW + G N + ++
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSED-LVVSASLDQTVRVWDISGLRKKNLSPGAVDTEV 181
Query: 186 KGVNCVDYYHGGDK--PYLISGADDRLVKIW 214
+G++ VD + D +++ DR V W
Sbjct: 182 RGISGVDLFGASDAVVKHVLEQGHDRGVN-W 211
Score = 193 (73.0 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 44/163 (26%), Positives = 75/163 (46%)
Query: 53 FEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP 112
FE V+ F P++ WI+ + + +++Y F+ H VR + H QP
Sbjct: 5 FETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQP 64
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
++ DD IK+WN+ K C GH Y+ + + SAS D+T+++W
Sbjct: 65 LFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRIWNW 122
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 123 QSRTCVCVLTGHNHYVMCAQFHPSED--LVVSASLDQTVRVWD 163
Score = 176 (67.0 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 40/131 (30%), Positives = 70/131 (53%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
FE S V+ ++ HP +P++L S + +I+LW++ + F+ H V I + K
Sbjct: 5 FETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDK-FDEHDGPVRGIDFH-KQ 62
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
F S D +KVW FTL GH + ++H + P+++S +DD+ ++IW
Sbjct: 63 QPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRIW 120
Query: 215 DYQNKTCVQTL 225
++Q++TCV L
Sbjct: 121 NWQSRTCVCVL 131
Score = 136 (52.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 45/166 (27%), Positives = 74/166 (44%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHE--TNQNVKSFEVCDLPVRAAKFVPR 68
LT + V C HP+E ++++ + V VW+ +N+ V D VR V
Sbjct: 131 LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAV-DTEVRGISGVD- 188
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW-- 126
+ G+ D V + LE + H V A HP+ P +++ +DD +K+W
Sbjct: 189 ----LFGASDAVV----KHVLE-----QGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRM 235
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
N KAW GH + V V +P+ S S D++++VW +
Sbjct: 236 NESKAWELDTC-RGHYNNVSCAVFHPRQE-LILSNSEDKSIRVWDM 279
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 37/130 (28%), Positives = 63/130 (48%)
Query: 57 DLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFH--SFEAHSDYVRCVAVHPTQPFL 114
D V A F P IV+G+DD QV ++ N + + + H + V C HP Q +
Sbjct: 206 DRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAWELDTCRGHYNNVSCAVFHPRQELI 265
Query: 115 LTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
L++S+D I++W+ K Q H + + + +P + N FA A D + V++L
Sbjct: 266 LSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWV-LGAHP-NLNLFA-AGHDSGMLVFKLER 322
Query: 175 ASPNFTLEGH 184
P + + G+
Sbjct: 323 ERPAYAVYGN 332
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 324 (119.1 bits), Expect = 7.1e-28, P = 7.1e-28
Identities = 69/204 (33%), Positives = 107/204 (52%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
K +S RVK HP PW+L SL+NG + +W++ + F+ D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
V+G DD ++ V+NY + H DY+R H P++L++SDD I++WNW+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL-GSASPNFT---LEGHE 185
C V GH HYVM +P ++ SASLD+TV+VW + G N + +E
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSED-LVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYYHGGDK--PYLISGAD 207
+G+ VD + D +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 199 (75.1 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 46/163 (28%), Positives = 76/163 (46%)
Query: 53 FEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP 112
FE V+ F P++ WI+T + + +++Y F+ H VR + H QP
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQP 64
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
++ DD IK+WN+ K C GH Y+ + + SAS D+T++VW
Sbjct: 65 LFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRVWNW 122
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 123 QSRTCVCVLTGHNHYVMCAQFHPSED--LVVSASLDQTVRVWD 163
Score = 180 (68.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 40/131 (30%), Positives = 71/131 (54%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
FE S V+ ++ HP +P++LTS + +I+LW++ + F+ H V I + K
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDK-FDEHDGPVRGIDFH-KQ 62
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
F S D +KVW FTL GH + ++H + P+++S +DD+ +++W
Sbjct: 63 QPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRVW 120
Query: 215 DYQNKTCVQTL 225
++Q++TCV L
Sbjct: 121 NWQSRTCVCVL 131
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 44/164 (26%), Positives = 71/164 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V C HP+E ++++ + V VW+ + +L A + R
Sbjct: 131 LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD------ISGLRKKNLSPGAVESDVRG- 183
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW--NW 128
+TG D +F H E H V A HPT P +++ +DD +K+W N
Sbjct: 184 --ITGVD-----LFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 236
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
KAW GH + V V +P+ S S D++++VW +
Sbjct: 237 SKAWEVDTC-RGHYNNVSCAVFHPRQE-LILSNSEDKSIRVWDM 278
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/130 (28%), Positives = 63/130 (48%)
Query: 57 DLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFH--SFEAHSDYVRCVAVHPTQPFL 114
D V A F P IV+G+DD QV ++ N + + + H + V C HP Q +
Sbjct: 205 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
Query: 115 LTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
L++S+D I++W+ K Q H + + + +P + N FA A D + V++L
Sbjct: 265 LSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWV-LAAHP-NLNLFA-AGHDGGMIVFKLER 321
Query: 175 ASPNFTLEGH 184
P + + G+
Sbjct: 322 ERPAYAVHGN 331
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 324 (119.1 bits), Expect = 7.5e-28, P = 7.5e-28
Identities = 69/204 (33%), Positives = 107/204 (52%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
K +S RVK HP PW+L SL+NG + +W++ + F+ D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
V+G DD ++ V+NY + H DY+R H P++L++SDD I++WNW+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL-GSASPNFT---LEGHE 185
C V GH HYVM +P ++ SASLD+TV+VW + G N + +E
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSED-LVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYYHGGDK--PYLISGAD 207
+G+ VD + D +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 199 (75.1 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 46/163 (28%), Positives = 76/163 (46%)
Query: 53 FEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP 112
FE V+ F P++ WI+T + + +++Y F+ H VR + H QP
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQP 64
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
++ DD IK+WN+ K C GH Y+ + + SAS D+T++VW
Sbjct: 65 LFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRVWNW 122
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 123 QSRTCVCVLTGHNHYVMCAQFHPSED--LVVSASLDQTVRVWD 163
Score = 180 (68.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 40/131 (30%), Positives = 71/131 (54%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
FE S V+ ++ HP +P++LTS + +I+LW++ + F+ H V I + K
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDK-FDEHDGPVRGIDFH-KQ 62
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
F S D +KVW FTL GH + ++H + P+++S +DD+ +++W
Sbjct: 63 QPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRVW 120
Query: 215 DYQNKTCVQTL 225
++Q++TCV L
Sbjct: 121 NWQSRTCVCVL 131
Score = 145 (56.1 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 44/164 (26%), Positives = 71/164 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V C HP+E ++++ + V VW+ + +L A + R
Sbjct: 131 LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD------ISGLRKKNLSPGAVESDVRG- 183
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW--NW 128
+TG D +F H E H V A HPT P +++ +DD +K+W N
Sbjct: 184 --ITGVD-----LFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 236
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
KAW GH + V V +P+ S S D++++VW +
Sbjct: 237 SKAWEVDTC-RGHYNNVSCAVFHPRQE-LILSNSEDKSIRVWDM 278
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/130 (28%), Positives = 63/130 (48%)
Query: 57 DLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFH--SFEAHSDYVRCVAVHPTQPFL 114
D V A F P IV+G+DD QV ++ N + + + H + V C HP Q +
Sbjct: 205 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
Query: 115 LTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
L++S+D I++W+ K Q H + + + +P + N FA A D + V++L
Sbjct: 265 LSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWV-LAAHP-NLNLFA-AGHDGGMIVFKLER 321
Query: 175 ASPNFTLEGH 184
P + + G+
Sbjct: 322 ERPAYAVHGN 331
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 324 (119.1 bits), Expect = 8.0e-28, P = 8.0e-28
Identities = 69/204 (33%), Positives = 107/204 (52%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
K +S RVK HP PW+L SL+NG + +W++ + F+ D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
V+G DD ++ V+NY + H DY+R H P++L++SDD I++WNW+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL-GSASPNFT---LEGHE 185
C V GH HYVM +P ++ SASLD+TV+VW + G N + +E
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSED-LVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYYHGGDK--PYLISGAD 207
+G+ VD + D +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 199 (75.1 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 46/163 (28%), Positives = 76/163 (46%)
Query: 53 FEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP 112
FE V+ F P++ WI+T + + +++Y F+ H VR + H QP
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQP 64
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
++ DD IK+WN+ K C GH Y+ + + SAS D+T++VW
Sbjct: 65 LFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRVWNW 122
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 123 QSRTCVCVLTGHNHYVMCAQFHPSED--LVVSASLDQTVRVWD 163
Score = 180 (68.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 40/131 (30%), Positives = 71/131 (54%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
FE S V+ ++ HP +P++LTS + +I+LW++ + F+ H V I + K
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDK-FDEHDGPVRGIDFH-KQ 62
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
F S D +KVW FTL GH + ++H + P+++S +DD+ +++W
Sbjct: 63 QPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRVW 120
Query: 215 DYQNKTCVQTL 225
++Q++TCV L
Sbjct: 121 NWQSRTCVCVL 131
Score = 145 (56.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 44/164 (26%), Positives = 71/164 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V C HP+E ++++ + V VW+ + +L A + R
Sbjct: 131 LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD------ISGLRKKNLSPGAVESDVRG- 183
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW--NW 128
+TG D +F H E H V A HPT P +++ +DD +K+W N
Sbjct: 184 --ITGVD-----LFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 236
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
KAW GH + V V +P+ S S D++++VW +
Sbjct: 237 SKAWEVDTC-RGHYNNVSCAVFHPRQE-LILSNSEDKSIRVWDM 278
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/130 (28%), Positives = 63/130 (48%)
Query: 57 DLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFH--SFEAHSDYVRCVAVHPTQPFL 114
D V A F P IV+G+DD QV ++ N + + + H + V C HP Q +
Sbjct: 205 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
Query: 115 LTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
L++S+D I++W+ K Q H + + + +P + N FA A D + V++L
Sbjct: 265 LSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWV-LAAHP-NLNLFA-AGHDGGMIVFKLER 321
Query: 175 ASPNFTLEGH 184
P + + G+
Sbjct: 322 ERPAYAVHGN 331
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 324 (119.1 bits), Expect = 8.0e-28, P = 8.0e-28
Identities = 69/204 (33%), Positives = 107/204 (52%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
K +S RVK HP PW+L SL+NG + +W++ + F+ D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
V+G DD ++ V+NY + H DY+R H P++L++SDD I++WNW+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL-GSASPNFT---LEGHE 185
C V GH HYVM +P ++ SASLD+TV+VW + G N + +E
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSED-LVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYYHGGDK--PYLISGAD 207
+G+ VD + D +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 199 (75.1 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 46/163 (28%), Positives = 76/163 (46%)
Query: 53 FEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP 112
FE V+ F P++ WI+T + + +++Y F+ H VR + H QP
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQP 64
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
++ DD IK+WN+ K C GH Y+ + + SAS D+T++VW
Sbjct: 65 LFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRVWNW 122
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 123 QSRTCVCVLTGHNHYVMCAQFHPSED--LVVSASLDQTVRVWD 163
Score = 180 (68.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 40/131 (30%), Positives = 71/131 (54%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
FE S V+ ++ HP +P++LTS + +I+LW++ + F+ H V I + K
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDK-FDEHDGPVRGIDFH-KQ 62
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
F S D +KVW FTL GH + ++H + P+++S +DD+ +++W
Sbjct: 63 QPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRVW 120
Query: 215 DYQNKTCVQTL 225
++Q++TCV L
Sbjct: 121 NWQSRTCVCVL 131
Score = 145 (56.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 44/164 (26%), Positives = 71/164 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V C HP+E ++++ + V VW+ + +L A + R
Sbjct: 131 LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD------ISGLRKKNLSPGAVESDVRG- 183
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW--NW 128
+TG D +F H E H V A HPT P +++ +DD +K+W N
Sbjct: 184 --ITGVD-----LFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 236
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
KAW GH + V V +P+ S S D++++VW +
Sbjct: 237 SKAWEVDTC-RGHYNNVSCAVFHPRQE-LILSNSEDKSIRVWDM 278
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/130 (28%), Positives = 63/130 (48%)
Query: 57 DLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFH--SFEAHSDYVRCVAVHPTQPFL 114
D V A F P IV+G+DD QV ++ N + + + H + V C HP Q +
Sbjct: 205 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
Query: 115 LTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
L++S+D I++W+ K Q H + + + +P + N FA A D + V++L
Sbjct: 265 LSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWV-LAAHP-NLNLFA-AGHDGGMIVFKLER 321
Query: 175 ASPNFTLEGH 184
P + + G+
Sbjct: 322 ERPAYAVHGN 331
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 324 (119.1 bits), Expect = 8.0e-28, P = 8.0e-28
Identities = 69/204 (33%), Positives = 107/204 (52%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
K +S RVK HP PW+L SL+NG + +W++ + F+ D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
V+G DD ++ V+NY + H DY+R H P++L++SDD I++WNW+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL-GSASPNFT---LEGHE 185
C V GH HYVM +P ++ SASLD+TV+VW + G N + +E
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSED-LVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYYHGGDK--PYLISGAD 207
+G+ VD + D +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 199 (75.1 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 46/163 (28%), Positives = 76/163 (46%)
Query: 53 FEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP 112
FE V+ F P++ WI+T + + +++Y F+ H VR + H QP
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQP 64
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
++ DD IK+WN+ K C GH Y+ + + SAS D+T++VW
Sbjct: 65 LFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRVWNW 122
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 123 QSRTCVCVLTGHNHYVMCAQFHPSED--LVVSASLDQTVRVWD 163
Score = 180 (68.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 40/131 (30%), Positives = 71/131 (54%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
FE S V+ ++ HP +P++LTS + +I+LW++ + F+ H V I + K
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDK-FDEHDGPVRGIDFH-KQ 62
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
F S D +KVW FTL GH + ++H + P+++S +DD+ +++W
Sbjct: 63 QPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRVW 120
Query: 215 DYQNKTCVQTL 225
++Q++TCV L
Sbjct: 121 NWQSRTCVCVL 131
Score = 145 (56.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 44/164 (26%), Positives = 71/164 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V C HP+E ++++ + V VW+ + +L A + R
Sbjct: 131 LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD------ISGLRKKNLSPGAVESDVRG- 183
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW--NW 128
+TG D +F H E H V A HPT P +++ +DD +K+W N
Sbjct: 184 --ITGVD-----LFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 236
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
KAW GH + V V +P+ S S D++++VW +
Sbjct: 237 SKAWEVDTC-RGHYNNVSCAVFHPRQE-LILSNSEDKSIRVWDM 278
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/130 (28%), Positives = 63/130 (48%)
Query: 57 DLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFH--SFEAHSDYVRCVAVHPTQPFL 114
D V A F P IV+G+DD QV ++ N + + + H + V C HP Q +
Sbjct: 205 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
Query: 115 LTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
L++S+D I++W+ K Q H + + + +P + N FA A D + V++L
Sbjct: 265 LSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWV-LAAHP-NLNLFA-AGHDGGMIVFKLER 321
Query: 175 ASPNFTLEGH 184
P + + G+
Sbjct: 322 ERPAYAVHGN 331
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 324 (119.1 bits), Expect = 8.0e-28, P = 8.0e-28
Identities = 69/204 (33%), Positives = 107/204 (52%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
K +S RVK HP PW+L SL+NG + +W++ + F+ D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
V+G DD ++ V+NY + H DY+R H P++L++SDD I++WNW+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL-GSASPNFT---LEGHE 185
C V GH HYVM +P ++ SASLD+TV+VW + G N + +E
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPSED-LVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYYHGGDK--PYLISGAD 207
+G+ VD + D +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 199 (75.1 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 46/163 (28%), Positives = 76/163 (46%)
Query: 53 FEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP 112
FE V+ F P++ WI+T + + +++Y F+ H VR + H QP
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQP 64
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
++ DD IK+WN+ K C GH Y+ + + SAS D+T++VW
Sbjct: 65 LFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRVWNW 122
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 123 QSRTCVCVLTGHNHYVMCAQFHPSED--LVVSASLDQTVRVWD 163
Score = 180 (68.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 40/131 (30%), Positives = 71/131 (54%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
FE S V+ ++ HP +P++LTS + +I+LW++ + F+ H V I + K
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDK-FDEHDGPVRGIDFH-KQ 62
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
F S D +KVW FTL GH + ++H + P+++S +DD+ +++W
Sbjct: 63 QPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRVW 120
Query: 215 DYQNKTCVQTL 225
++Q++TCV L
Sbjct: 121 NWQSRTCVCVL 131
Score = 145 (56.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 44/164 (26%), Positives = 71/164 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V C HP+E ++++ + V VW+ + +L A + R
Sbjct: 131 LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD------ISGLRKKNLSPGAVESDVRG- 183
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW--NW 128
+TG D +F H E H V A HPT P +++ +DD +K+W N
Sbjct: 184 --ITGVD-----LFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 236
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
KAW GH + V V +P+ S S D++++VW +
Sbjct: 237 SKAWEVDTC-RGHYNNVSCAVFHPRQE-LILSNSEDKSIRVWDM 278
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/130 (28%), Positives = 63/130 (48%)
Query: 57 DLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFH--SFEAHSDYVRCVAVHPTQPFL 114
D V A F P IV+G+DD QV ++ N + + + H + V C HP Q +
Sbjct: 205 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
Query: 115 LTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
L++S+D I++W+ K Q H + + + +P + N FA A D + V++L
Sbjct: 265 LSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWV-LAAHP-NLNLFA-AGHDGGMIVFKLER 321
Query: 175 ASPNFTLEGH 184
P + + G+
Sbjct: 322 ERPAYAVHGN 331
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 324 (119.1 bits), Expect = 8.1e-28, P = 8.1e-28
Identities = 72/204 (35%), Positives = 109/204 (53%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI 72
++S RVK HP PW+L SL++G + +W++ + ++ F+ D PVR F +
Sbjct: 7 SKSARVKGLSFHPKRPWILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFHQQMPLF 66
Query: 73 VTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAW 132
V+G DD ++ V+NY + AH DYVR VA H P++L++SDD I++WNW+
Sbjct: 67 VSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEYPWILSASDDQTIRIWNWQSR- 125
Query: 133 ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL-GSASPNFT-----LEGHEK 186
C V GH HYVM +P ++ SASLD+TV+VW + G N L+ H K
Sbjct: 126 NCICVLTGHNHYVMCAQFHPTEDQ-IVSASLDQTVRVWDISGLRKKNVAPGPGGLDDHLK 184
Query: 187 G-VNCVDYYHGGDK--PYLISGAD 207
G D + D +++ G D
Sbjct: 185 GHPGATDLFGQADAVVKHVLEGHD 208
Score = 192 (72.6 bits), Expect = 9.7e-14, P = 9.7e-14
Identities = 44/164 (26%), Positives = 77/164 (46%)
Query: 52 SFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQ 111
+FE V+ F P++ WI+ + +++Y F+ H VR VA H
Sbjct: 4 NFESKSARVKGLSFHPKRPWILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFHQQM 63
Query: 112 PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
P ++ DD IK+WN+++ C H YV + + + SAS D+T+++W
Sbjct: 64 PLFVSGGDDYKIKVWNYKQR-RCIFTLLAHLDYVRTVAFH-HEYPWILSASDDQTIRIWN 121
Query: 172 LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
S + L GH V C ++ D+ ++S + D+ V++WD
Sbjct: 122 WQSRNCICVLTGHNHYVMCAQFHPTEDQ--IVSASLDQTVRVWD 163
Score = 169 (64.5 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 37/132 (28%), Positives = 71/132 (53%)
Query: 94 SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPK 153
+FE+ S V+ ++ HP +P++L S +I+LW++ ++ F+ H V + + +
Sbjct: 4 NFESKSARVKGLSFHPKRPWILVSLHSGVIQLWDYRMHTLLEK-FDEHDGPVRGVAFH-Q 61
Query: 154 DNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
F S D +KVW FTL H V V ++H + P+++S +DD+ ++I
Sbjct: 62 QMPLFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHH--EYPWILSASDDQTIRI 119
Query: 214 WDYQNKTCVQTL 225
W++Q++ C+ L
Sbjct: 120 WNWQSRNCICVL 131
Score = 134 (52.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 50/216 (23%), Positives = 91/216 (42%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L A D V+ H PW+L++ + + +WN ++ + + V A+F P ++
Sbjct: 89 LLAHLDYVRTVAFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTED 148
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
IV+ S D V V++ + L + + + HP L +D ++
Sbjct: 149 QIVSASLDQTVRVWDISGLRKKNVAPGPGGLDDHLKGHPGATDLFGQADAVV-------- 200
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS--ASPNFTLEGHEKGV 188
+ V EGH +P S + DR VK+W++ A T GH V
Sbjct: 201 ----KHVLEGHDRGFNWASFHPT-LPLIVSGADDRLVKLWRMNEYKAWEVDTCRGHYNNV 255
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ V ++ D ++S +DR +++WD + C+ T
Sbjct: 256 SSVLFHPRQD--LILSNGEDRSIRVWDMTKRQCLFT 289
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 323 (118.8 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 61/164 (37%), Positives = 94/164 (57%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
K ++S R K HP PW+L SL++ + +W++ + FE D PVR F P +
Sbjct: 4 KFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFHPTQ 63
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
V+G DD ++ V+NY T + H DYVR V HP P++L++SDD I++WNW+
Sbjct: 64 PLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELPWILSASDDQTIRIWNWQ 123
Query: 130 -KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
++ C GH HYVM +P ++ ASASLD++V++W +
Sbjct: 124 NRSLICTMT--GHNHYVMCAQFHPTED-LIASASLDQSVRIWDI 164
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 41/131 (31%), Positives = 70/131 (53%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
FE+ S + +A HP +P++L S I+LW++ + FE H V I +P
Sbjct: 5 FESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDR-FEEHDGPVRGIDFHPTQ 63
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
F S D +KVW + FTL GH V V ++H + P+++S +DD+ ++IW
Sbjct: 64 P-LFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTV-FFHP-ELPWILSASDDQTIRIW 120
Query: 215 DYQNKTCVQTL 225
++QN++ + T+
Sbjct: 121 NWQNRSLICTM 131
Score = 149 (57.5 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 49/222 (22%), Positives = 96/222 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L D V+ HP PW+L++ + + +WN + + + + V A+F P ++
Sbjct: 89 LNGHLDYVRTVFFHPELPWILSASDDQTIRIWNWQNRSLICTMTGHNHYVMCAQFHPTED 148
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
I + S D V +++ + L + HS + +A + + D ++K
Sbjct: 149 LIASASLDQSVRIWDISGLRKKHSAPTTMSFEDQMARANNAQADMFGNTDAVVKF----- 203
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS--ASPNFTLEGHEKGV 188
V EGH V + +P SA DR +K+W++ A T GH +
Sbjct: 204 ------VLEGHDRGVNWVAFHPS-LPLIVSAGDDRLIKLWRMSDTKAWEVDTCRGHFQNA 256
Query: 189 N-CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ C+ + H + ++S +D+ ++ WD +T VQ+ + +
Sbjct: 257 SACLFHPH---QDLILSVGEDKTIRAWDLNKRTPVQSFKRDV 295
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 323 (118.8 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 69/204 (33%), Positives = 107/204 (52%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
K +S RVK HP PW+L SL+NG + +W++ + F+ D PVR F ++
Sbjct: 4 KFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQ 63
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
V+G DD ++ V+NY + H DY+R H P++L++SDD I++WNW+
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQ 123
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL-GSASPNFT---LEGHE 185
C V GH HYVM +P ++ SASLD+TV+VW + G N + +E
Sbjct: 124 SR-TCVCVLTGHNHYVMCAQFHPTED-LVVSASLDQTVRVWDISGLRKKNLSPGAVESDV 181
Query: 186 KGVNCVDYYHGGDK--PYLISGAD 207
+G+ VD + D +++ G D
Sbjct: 182 RGITGVDLFGTTDAVVKHVLEGHD 205
Score = 197 (74.4 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 46/163 (28%), Positives = 76/163 (46%)
Query: 53 FEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP 112
FE V+ F P++ WI+T + + +++Y F+ H VR + H QP
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQP 64
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
++ DD IK+WN+ K C GH Y+ + + SAS D+T++VW
Sbjct: 65 LFVSGGDDYKIKVWNY-KLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRVWNW 122
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
S + L GH V C ++ D ++S + D+ V++WD
Sbjct: 123 QSRTCVCVLTGHNHYVMCAQFHPTED--LVVSASLDQTVRVWD 163
Score = 180 (68.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 40/131 (30%), Positives = 71/131 (54%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
FE S V+ ++ HP +P++LTS + +I+LW++ + F+ H V I + K
Sbjct: 5 FETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDK-FDEHDGPVRGIDFH-KQ 62
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
F S D +KVW FTL GH + ++H + P+++S +DD+ +++W
Sbjct: 63 QPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRVW 120
Query: 215 DYQNKTCVQTL 225
++Q++TCV L
Sbjct: 121 NWQSRTCVCVL 131
Score = 149 (57.5 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 45/164 (27%), Positives = 71/164 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V C HPTE ++++ + V VW+ + +L A + R
Sbjct: 131 LTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWD------ISGLRKKNLSPGAVESDVRG- 183
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW--NW 128
+TG D +F H E H V A HPT P +++ +DD +K+W N
Sbjct: 184 --ITGVD-----LFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 236
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
KAW GH + V V +P+ S S D++++VW +
Sbjct: 237 SKAWEVDTC-RGHYNNVSCAVFHPRQE-LILSNSEDKSIRVWDM 278
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/130 (28%), Positives = 63/130 (48%)
Query: 57 DLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFH--SFEAHSDYVRCVAVHPTQPFL 114
D V A F P IV+G+DD QV ++ N + + + H + V C HP Q +
Sbjct: 205 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 264
Query: 115 LTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
L++S+D I++W+ K Q H + + + +P + N FA A D + V++L
Sbjct: 265 LSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWV-LAAHP-NLNLFA-AGHDGGMIVFKLER 321
Query: 175 ASPNFTLEGH 184
P + + G+
Sbjct: 322 ERPAYAVHGN 331
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 294 (108.6 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 58/165 (35%), Positives = 90/165 (54%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
K ++S R K HP PW L SL++ + +W++ + FE PVR+ F P +
Sbjct: 6 KFESKSSRAKGVAFHPKRPWALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFHPTQ 65
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
V+G DD + V++ NT + + H DY+R V+ H P++++ SDD I++WNW+
Sbjct: 66 PLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQ 125
Query: 130 KAW--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
AC GH HYVM +P ++ SASLD+TV+VW +
Sbjct: 126 NRQEIAC---LTGHNHYVMSAQFHPSED-LIVSASLDQTVRVWDI 166
Score = 198 (74.8 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 43/125 (34%), Positives = 67/125 (53%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
FE+ S + VA HP +P+ L S I+LW++ + FE H V + +P
Sbjct: 7 FESKSSRAKGVAFHPKRPWALVSLHSSTIQLWDYRMGTLIDR-FEDHVGPVRSVDFHPTQ 65
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
F S D T+KVW L + FTL GH + V ++H D P++IS +DD+ ++IW
Sbjct: 66 P-LFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHH--DLPWIISCSDDQTIRIW 122
Query: 215 DYQNK 219
++QN+
Sbjct: 123 NWQNR 127
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 53/215 (24%), Positives = 92/215 (42%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L D ++ H PW+++ + + +WN + Q + + V +A+F P ++
Sbjct: 91 LNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSED 150
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
IV+ S D V V++ + L + HS A + VR Q L D ++
Sbjct: 151 LIVSASLDQTVRVWDISGLRKKHS--APTSSVRAFE-DQLQRQQLPQQD-----IFGNIN 202
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS--ASPNFTLEGHEKGV 188
A + V EGH V +P SA DR VK+W++ A T GH V
Sbjct: 203 A-VVKYVLEGHDKGVNYASFHPT-LPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNV 260
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
++ D ++S +DD+ +++WD + V+
Sbjct: 261 LSAIFHPHQD--LILSVSDDKTIRVWDLNKRVPVK 293
Score = 37 (18.1 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 168 KVWQ-LGSASPNFTLEGHEKGVNCV-DYYHGGDKP---YLISGADDRLVKI 213
++W+ LG + L+G+ + V + H DK YL G D+RL K+
Sbjct: 683 QIWEKLGEEA---LLQGNIEIVEYIYQQLHHFDKLSFLYLYKGDDERLDKM 730
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 301 (111.0 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 65/196 (33%), Positives = 102/196 (52%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSD 77
+K HP PW+L+SL+NG + +W + F+ D PVR F ++ V+G D
Sbjct: 2 LKRLSFHPKRPWILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 61
Query: 78 DMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQV 137
D ++ V+NY + H DY+R H P++L++SDD I++WNW+ C V
Sbjct: 62 DYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSR-TCVCV 120
Query: 138 FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL-GSASPNFT---LEGHEKGVNCVDY 193
GH HYVM +P ++ SASLD+TV+VW + G N + +E +G+ VD
Sbjct: 121 LTGHNHYVMCAQFHPSED-LVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 179
Query: 194 YHGGDK--PYLISGAD 207
+ D +++ G D
Sbjct: 180 FGTTDAVVKHVLEGHD 195
Score = 175 (66.7 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 41/156 (26%), Positives = 72/156 (46%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
++ F P++ WI++ + + ++ F+ H VR + H QP ++ D
Sbjct: 2 LKRLSFHPKRPWILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGD 61
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D IK+WN+ K C GH Y+ + + SAS D+T++VW S +
Sbjct: 62 DYKIKVWNY-KLRRCLFTLLGHLDYIRTTFFH-HEYPWILSASDDQTIRVWNWQSRTCVC 119
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
L GH V C ++ D ++S + D+ V++WD
Sbjct: 120 VLTGHNHYVMCAQFHPSED--LVVSASLDQTVRVWD 153
Score = 161 (61.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 37/123 (30%), Positives = 66/123 (53%)
Query: 105 VAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASAS 162
++ HP +P++L+S + +I+LW W C + F+ H V I + K F S
Sbjct: 5 LSFHPKRPWILSSLHNGVIQLWT--TGW-CTLIDKFDEHDGPVRGIDFH-KQQPLFVSGG 60
Query: 163 LDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 222
D +KVW FTL GH + ++H + P+++S +DD+ +++W++Q++TCV
Sbjct: 61 DDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHH--EYPWILSASDDQTIRVWNWQSRTCV 118
Query: 223 QTL 225
L
Sbjct: 119 CVL 121
Score = 145 (56.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 44/164 (26%), Positives = 71/164 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V C HP+E ++++ + V VW+ + +L A + R
Sbjct: 121 LTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWD------ISGLRKKNLSPGAVESDVRG- 173
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW--NW 128
+TG D +F H E H V A HPT P +++ +DD +K+W N
Sbjct: 174 --ITGVD-----LFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE 226
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
KAW GH + V V +P+ S S D++++VW +
Sbjct: 227 SKAWEVDTC-RGHYNNVSCAVFHPRQE-LILSNSEDKSIRVWDM 268
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/130 (28%), Positives = 63/130 (48%)
Query: 57 DLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFH--SFEAHSDYVRCVAVHPTQPFL 114
D V A F P IV+G+DD QV ++ N + + + H + V C HP Q +
Sbjct: 195 DRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELI 254
Query: 115 LTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
L++S+D I++W+ K Q H + + + +P + N FA A D + V++L
Sbjct: 255 LSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWV-LAAHP-NLNLFA-AGHDGGMIVFKLER 311
Query: 175 ASPNFTLEGH 184
P + + G+
Sbjct: 312 ERPAYAVHGN 321
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 285 (105.4 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 56/176 (31%), Positives = 94/176 (53%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
K ++S R K HP+ PW+L +L++ + +W++ + FE + PVR F P +
Sbjct: 6 KFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQ 65
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
V+ DD + V++ +T + ++ H DYVR V H P+++++SDD I++WNW+
Sbjct: 66 PIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQ 125
Query: 130 --KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
K AC GH H+VM +P D+ SASLD T+++W + + G
Sbjct: 126 NRKEIAC---LTGHNHFVMCAQFHPTDD-LIVSASLDETIRIWDISGLRKRHSAPG 177
Score = 183 (69.5 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 41/125 (32%), Positives = 70/125 (56%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
FE+ S + +A HP++P++L + I+LW++ + FE H V + +P
Sbjct: 7 FESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHR-FEDHEGPVRGLDFHPTQ 65
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
F SA D T+KVW L + +TL GH V V ++H + P++IS +DD+ ++IW
Sbjct: 66 P-IFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTV-FFHR-ELPWIISASDDQTIRIW 122
Query: 215 DYQNK 219
++QN+
Sbjct: 123 NWQNR 127
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/216 (25%), Positives = 97/216 (44%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT D V+ H PW++++ + + +WN + + + + V A+F P +
Sbjct: 91 LTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDD 150
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
IV+ S D + +++ + L + HS S + ++ Q L S D ++K
Sbjct: 151 LIVSASLDETIRIWDISGLRKRHSAPGTSSFEEQMSAQ--QNLLDGSLGDCVVKF----- 203
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF---TLEGHEKG 187
+ EGHT V +P S S DR VK+W++ SA+ + T GH
Sbjct: 204 ------ILEGHTRGVNWASFHPT-LPLIVSGSDDRQVKLWRM-SATKAWEVDTCRGHTNN 255
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
V+ V +H +IS +D+ +++WD +T V+
Sbjct: 256 VDSV-IFHPHQN-LIISVGEDKTLRVWDLDKRTPVK 289
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 181 (68.8 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 42/128 (32%), Positives = 63/128 (49%)
Query: 94 SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPK 153
+F HSD V C+ + + +L+T S D IK+W + C + GHT V +V
Sbjct: 378 TFTGHSDGVTCLQFN--RKYLMTGSYDTTIKIWKIDSG-ECVKTLTGHTKGVRALVF--- 431
Query: 154 DNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
DN S LD T+KVW + T GHE V VD+ + ++SG+ D V++
Sbjct: 432 DNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKS----IVSGSADHTVRV 487
Query: 214 WDYQNKTC 221
W ++TC
Sbjct: 488 WHVDSRTC 495
Score = 169 (64.5 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 44/166 (26%), Positives = 83/166 (50%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
+ T SD V C + +++ Y+ + +W ++ + VK+ VRA F +
Sbjct: 377 KTFTGHSDGVTCLQFN--RKYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQ 434
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW 128
K +++G D + V+NY+T + ++ H D V V+V T +++ S D +++W+
Sbjct: 435 K--LISGGLDSTIKVWNYHTGQCIATYRGHEDAV--VSVDFTNKSIVSGSADHTVRVWHV 490
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
+ C + GHT +V + I+ N F SAS D T+++W + S
Sbjct: 491 DSR-TCYTL-RGHTDWVNHVKIHSASNTIF-SASDDTTIRMWDMNS 533
Score = 143 (55.4 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 33/98 (33%), Positives = 47/98 (47%)
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
NW K + F GH+ V + N K + S D T+K+W++ S TL GH K
Sbjct: 368 NWRKGTHTIKTFTGHSDGVTCLQFNRK---YLMTGSYDTTIKIWKIDSGECVKTLTGHTK 424
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
GV + + D LISG D +K+W+Y C+ T
Sbjct: 425 GVRALVF----DNQKLISGGLDSTIKVWNYHTGQCIAT 458
Score = 125 (49.1 bits), Expect = 4.0e-22, Sum P(2) = 4.0e-22
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 158 FASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
F +++LD T+K+W + + T GH +GV + D +ISGA DRL+K+WD Q
Sbjct: 641 FLTSALDNTIKLWDVATGKCIRTQFGHIEGVWSI----AADTFRIISGAHDRLIKVWDLQ 696
Query: 218 NKTCVQTLES 227
N C+ T +
Sbjct: 697 NGKCLHTFSN 706
Score = 117 (46.2 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 28/102 (27%), Positives = 53/102 (51%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
+ VWN+ T Q + ++ + V + F + IV+GS D V V++ ++ ++ H
Sbjct: 445 IKVWNYHTGQCIATYRGHEDAVVSVDFTNKS--IVSGSADHTVRVWHVDS-RTCYTLRGH 501
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEG 140
+D+V V +H + ++SDD I++W+ C +VF G
Sbjct: 502 TDWVNHVKIHSASNTIFSASDDTTIRMWDMNSN-ECIKVFGG 542
Score = 50 (22.7 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 201 YLISGADDRLVKIWDYQNKTCVQT 224
+ ++ A D +K+WD C++T
Sbjct: 640 HFLTSALDNTIKLWDVATGKCIRT 663
Score = 38 (18.4 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 8/43 (18%), Positives = 20/43 (46%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSF 53
L +D V +H + ++ + + +W+ +N+ +K F
Sbjct: 498 LRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVF 540
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 157 (60.3 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 34/118 (28%), Positives = 58/118 (49%)
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQ 135
S DM + ++++ E + H V VA+ P ++++S D IK+W + + C
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CV 59
Query: 136 QVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY 193
+ F GH +V + N +D AS S D+TV+VW + + L HE V C+ +
Sbjct: 60 KTFTGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 116
Score = 145 (56.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 33/104 (31%), Positives = 54/104 (51%)
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
S DM IKLW+++ + C + GH H V + I P ++ SAS D+T+K+W++ +
Sbjct: 1 SADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYC 58
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
T GH + V V G + S ++D+ V++W K C
Sbjct: 59 VKTFTGHREWVRMVRPNQDGT--LIASCSNDQTVRVWVVATKEC 100
Score = 118 (46.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 24/88 (27%), Positives = 47/88 (53%)
Query: 85 NYNTLERFHSFEA-HSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+Y+++ E H ++VR V H F+L+ +DD +++W+++ C + H H
Sbjct: 121 SYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK-RCMKTLNAHEH 179
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQ 171
+V + + K + S+D+TVKVW+
Sbjct: 180 FVTSLDFH-KTAPYVVTGSVDQTVKVWE 206
Score = 108 (43.1 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 183 GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
GH+ V V +H G K +++S ADD+ +++WDY+NK C++TL +
Sbjct: 134 GHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA 176
Score = 85 (35.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 25/124 (20%), Positives = 56/124 (45%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
+ +W+ + + +++ D V + +P + IV+ S D + ++ T +F H
Sbjct: 6 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 65
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
++VR V + + + S+D +++W C+ H H V I P+ +++
Sbjct: 66 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATK-ECKAELREHEHVVECISWAPE--SSY 122
Query: 159 ASAS 162
+S S
Sbjct: 123 SSIS 126
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 256 (95.2 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 65/220 (29%), Positives = 105/220 (47%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++ L SD V+ + + +LAS + V +W+ T + E VR+ F
Sbjct: 330 LQHTLEGHSDLVRSV-IFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS 388
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
+ + SDD V +++ T H+ E H D+VR V L ++SDD +K+W
Sbjct: 389 HDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW 448
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + Q EGH +V ++ + D+ ASAS DRTV++W S TLEGH
Sbjct: 449 DTGTG-SLQHTLEGHRDWVRSVIFS-HDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSS 506
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
V V + H D L S ++D+ V+IWD + ++ T +
Sbjct: 507 LVTSVSFSH--DSRLLASASNDQTVRIWDIEARSLQHTFD 544
Score = 239 (89.2 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 63/187 (33%), Positives = 93/187 (49%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
V NH + +++ E + V + + + + SDD V +++ T H+ E HSD
Sbjct: 281 VANH-WSPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSD 339
Query: 101 YVRCVAV-HPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFA 159
VR V H ++ LL S+ D +K+W+ + Q EGH +V ++ + D+ A
Sbjct: 340 LVRSVIFSHDSR--LLASASDSTVKIWDTGTG-SLQHTLEGHRDWVRSVIFS-HDSQLLA 395
Query: 160 SASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK 219
SAS D TVK+W G+ S TLEGH V V + H D L S +DD VKIWD
Sbjct: 396 SASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSH--DSQLLASASDDSTVKIWDTGTG 453
Query: 220 TCVQTLE 226
+ TLE
Sbjct: 454 SLQHTLE 460
Score = 154 (59.3 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 49/151 (32%), Positives = 69/151 (45%)
Query: 90 ERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI-KLW-----NWEKA-------WA-CQ 135
+ + F + ++C + L+ S D LI KL+ NW + W+ C
Sbjct: 230 DSYRFFLQNISAIKCAPLQVYASALVFSPADSLIRKLFGKEEPNWIETKPDVANHWSPCL 289
Query: 136 QVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYH 195
Q EGH V+ + + D+ ASAS DRTVK+W + S TLEGH V V + H
Sbjct: 290 QALEGHEAAVLSVSYS-HDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSH 348
Query: 196 GGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
L++ A D VKIWD + TLE
Sbjct: 349 DSR---LLASASDSTVKIWDTGTGSLQHTLE 376
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 262 (97.3 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 67/224 (29%), Positives = 106/224 (47%)
Query: 2 PLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVR 61
P ++++ L RS VK P + + V +WN T + +++ E VR
Sbjct: 905 PATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVR 964
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
+ F P + + S D + ++N T E +F+ H ++R VA P L++ SDD
Sbjct: 965 SVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDN 1024
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL 181
IKLW+ + QQ E H+ V + +P D+ AS+SLD T+K+W + TL
Sbjct: 1025 TIKLWDLATS-ELQQSLEDHSRSVHAVAFSP-DDKQLASSSLDSTIKLWDSATGELQRTL 1082
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
EGH +GV V + D L S + D +K+W+ QTL
Sbjct: 1083 EGHSQGVRSVTF--SPDGKLLASNSYDGTIKLWNPLTGELQQTL 1124
Score = 256 (95.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 66/221 (29%), Positives = 104/221 (47%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
++++ L + S V+ P + +S + + VWN T + +S E V++ F
Sbjct: 867 ELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAF 926
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
P + +GS+ V ++N T E + E HS VR VA P L +SS D IKL
Sbjct: 927 SPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKL 986
Query: 126 WNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
WN QQ F+GH ++ + +P D S S D T+K+W L ++ +LE H
Sbjct: 987 WN-STTGELQQTFKGHDLWIRAVAFSP-DGKHLVSGSDDNTIKLWDLATSELQQSLEDHS 1044
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ V+ V + D L S + D +K+WD +TLE
Sbjct: 1045 RSVHAVAF--SPDDKQLASSSLDSTIKLWDSATGELQRTLE 1083
Score = 255 (94.8 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 70/225 (31%), Positives = 105/225 (46%)
Query: 2 PLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVR 61
P ++ + L S V+ P + +S + + +WN T + ++F+ DL +R
Sbjct: 947 PATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIR 1006
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
A F P +V+GSDD + +++ T E S E HS V VA P L +SS D
Sbjct: 1007 AVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDS 1066
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL 181
IKLW+ Q+ EGH+ V + +P D AS S D T+K+W + TL
Sbjct: 1067 TIKLWD-SATGELQRTLEGHSQGVRSVTFSP-DGKLLASNSYDGTIKLWNPLTGELQQTL 1124
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
G V+ V + G + L SG D +K+WD +QTLE
Sbjct: 1125 TGRSDWVDSVAFSPDGKQ--LASGYYDSTIKLWDSATGELLQTLE 1167
Score = 232 (86.7 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 61/225 (27%), Positives = 102/225 (45%)
Query: 2 PLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVR 61
P ++ + L S V+ P + + Y+ + +W+ T + +++FE +
Sbjct: 779 PATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIW 838
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
+ F P + + SDD + +++ T E + ++HS VR VA P L +SS D
Sbjct: 839 SVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDS 898
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL 181
IK+WN QQ EG + +V + +P D AS S TVK+W + TL
Sbjct: 899 TIKVWN-PATGELQQSLEGRSGWVKSVAFSP-DGKKLASGSEKNTVKLWNPATGELLQTL 956
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
EGH + V V + G + L S + D +K+W+ QT +
Sbjct: 957 EGHSQSVRSVAFSPDGKQ--LASSSSDTTIKLWNSTTGELQQTFK 999
Score = 226 (84.6 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 58/202 (28%), Positives = 96/202 (47%)
Query: 25 PTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVF 84
P +++ Y+ V +W+ T + +++ + V + F P + +GS D + ++
Sbjct: 760 PDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLW 819
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
+ T E +FE H + VA P L ++SDD IK+W+ QQ + H+
Sbjct: 820 DSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATG-ELQQTLDSHSQS 878
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLIS 204
V + +P D AS+SLD T+KVW + +LEG V V + G K L S
Sbjct: 879 VRSVAFSP-DGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKK--LAS 935
Query: 205 GADDRLVKIWDYQNKTCVQTLE 226
G++ VK+W+ +QTLE
Sbjct: 936 GSEKNTVKLWNPATGELLQTLE 957
Score = 205 (77.2 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 53/168 (31%), Positives = 77/168 (45%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV + F P +V+GS D V +++ T E + + HS V +A P L + S
Sbjct: 752 PVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGS 811
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
D I LW+ Q FEGH H + + P D ASAS D T+K+W L +
Sbjct: 812 YDNTIDLWD-SATGELLQTFEGHPHSIWSVAFAP-DGKELASASDDSTIKIWDLATGELQ 869
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
TL+ H + V V + D L S + D +K+W+ Q+LE
Sbjct: 870 QTLDSHSQSVRSVAF--SPDGKLLASSSLDSTIKVWNPATGELQQSLE 915
Score = 193 (73.0 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 54/221 (24%), Positives = 97/221 (43%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
+++R L S V+ P + ++ Y+G + +WN T + ++ V + F
Sbjct: 1077 ELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAF 1136
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
P + +G D + +++ T E + E HSD ++ V P L + S D KL
Sbjct: 1137 SPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKL 1196
Query: 126 WNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
W+ Q+FEGH+ +V + +P D AS+S T+K+W + TL +
Sbjct: 1197 WD-PATGELLQIFEGHSKWVESVAFSP-DGKLLASSSYGETIKLWDPVTGELLQTLNDPD 1254
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ V + G++ ++ D KIWD +Q L+
Sbjct: 1255 ESAGSVAFSPDGNR---LASVDIFDTKIWDPATGELLQALK 1292
Score = 163 (62.4 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 49/187 (26%), Positives = 80/187 (42%)
Query: 2 PLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVR 61
PL ++++ LT RSD V P + + Y+ + +W+ T + +++ E ++
Sbjct: 1115 PLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQ 1174
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
+ F P + +GS D +++ T E FE HS +V VA P L +SS
Sbjct: 1175 SVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGE 1234
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL 181
IKLW+ Q + +P D N AS + T K+W + L
Sbjct: 1235 TIKLWD-PVTGELLQTLNDPDESAGSVAFSP-DGNRLASVDIFDT-KIWDPATGELLQAL 1291
Query: 182 EGHEKGV 188
+GH K V
Sbjct: 1292 KGHSKWV 1298
Score = 151 (58.2 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 40/134 (29%), Positives = 59/134 (44%)
Query: 94 SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPK 153
+ E H V V P L++ S D +K+W+ Q +GH+ V + +P
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWD-PATGELLQTLDGHSGTVESLAFSP- 802
Query: 154 DNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
D AS S D T+ +W + T EGH + V + G + L S +DD +KI
Sbjct: 803 DGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKE--LASASDDSTIKI 860
Query: 214 WDYQNKTCVQTLES 227
WD QTL+S
Sbjct: 861 WDLATGELQQTLDS 874
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 32/99 (32%), Positives = 45/99 (45%)
Query: 129 EKAWAC-QQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
E+ W+ QQ E H V +V +P D S S D TVK+W + TL+GH
Sbjct: 736 EQTWSAEQQTLENHLGPVESVVFSP-DGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGT 794
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
V + + D L SG+ D + +WD +QT E
Sbjct: 795 VESLAF--SPDGKLLASGSYDNTIDLWDSATGELLQTFE 831
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 149 (57.5 bits), Expect = 7.8e-20, Sum P(2) = 7.8e-20
Identities = 32/115 (27%), Positives = 56/115 (48%)
Query: 79 MQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVF 138
M + ++++ E + H V VA+ P ++++S D IK+W + + C + F
Sbjct: 1 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTF 59
Query: 139 EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY 193
GH +V + N +D AS S D+TV+VW + + L HE V C+ +
Sbjct: 60 TGHREWVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 113
Score = 137 (53.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 31/101 (30%), Positives = 52/101 (51%)
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
M IKLW+++ + C + GH H V + I P ++ SAS D+T+K+W++ + T
Sbjct: 1 MTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCVKT 58
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
GH + V V G + S ++D+ V++W K C
Sbjct: 59 FTGHREWVRMVRPNQDGT--LIASCSNDQTVRVWVVATKEC 97
Score = 118 (46.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 24/88 (27%), Positives = 47/88 (53%)
Query: 85 NYNTLERFHSFEA-HSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+Y+++ E H ++VR V H F+L+ +DD +++W+++ C + H H
Sbjct: 118 SYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK-RCMKTLNAHEH 176
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQ 171
+V + + K + S+D+TVKVW+
Sbjct: 177 FVTSLDFH-KTAPYVVTGSVDQTVKVWE 203
Score = 108 (43.1 bits), Expect = 7.8e-20, Sum P(2) = 7.8e-20
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 183 GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
GH+ V V +H G K +++S ADD+ +++WDY+NK C++TL +
Sbjct: 131 GHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA 173
Score = 85 (35.0 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 25/124 (20%), Positives = 56/124 (45%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
+ +W+ + + +++ D V + +P + IV+ S D + ++ T +F H
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 62
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
++VR V + + + S+D +++W C+ H H V I P+ +++
Sbjct: 63 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATK-ECKAELREHEHVVECISWAPE--SSY 119
Query: 159 ASAS 162
+S S
Sbjct: 120 SSIS 123
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 248 (92.4 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 66/200 (33%), Positives = 96/200 (48%)
Query: 31 LASLYNG-HVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTL 89
LAS +G +V +W+ T E D V + F P + + SDD V +++ T
Sbjct: 404 LASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATG 463
Query: 90 ERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIV 149
+ E H+D+VR V + ++SDDM +K+W+ Q E H ++V +V
Sbjct: 464 SLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATV-PLQNNLESHDNWVRSVV 522
Query: 150 INPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDR 209
+ D+ ASAS D TVK+W + S TLEGH+ VN V + D L S +DD
Sbjct: 523 FS-HDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSF--SPDSRLLASASDDG 579
Query: 210 LVKIWDYQNKTCVQTLE-SG 228
VKIW T T + SG
Sbjct: 580 TVKIWYAATGTVQHTFDGSG 599
Score = 243 (90.6 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 67/199 (33%), Positives = 96/199 (48%)
Query: 30 MLASLYN-GHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
+LAS + G V +W+ T + + + VR+ F I +GS+D V ++ T
Sbjct: 319 LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTT 378
Query: 89 LERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQI 148
H+FE H D V V+ L ++SD +K+W+ + + Q V EGH V +
Sbjct: 379 GLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWD-TRTGSLQNVLEGHDDCVNSV 437
Query: 149 VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADD 208
+P D+ ASAS DRTVK+W + S TLEGH V V + H D + S +DD
Sbjct: 438 SFSP-DSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSH--DSRLIASASDD 494
Query: 209 RLVKIWDYQNKTCVQTLES 227
VKIWD LES
Sbjct: 495 MTVKIWDTATVPLQNNLES 513
Score = 239 (89.2 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 66/221 (29%), Positives = 101/221 (45%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKF 65
++R L +D V+ + + ++AS N V +W T +FE + V A F
Sbjct: 339 LQRMLKGHNDSVRSV-VFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSF 397
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+ + SD V +++ T + E H D V V+ P L ++SDD +K+
Sbjct: 398 AHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKI 457
Query: 126 WNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
W+ + Q+ EGH +V +V + D+ ASAS D TVK+W + LE H+
Sbjct: 458 WH-AATGSLQRTLEGHNDWVRSVVFS-HDSRLIASASDDMTVKIWDTATVPLQNNLESHD 515
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
V V + H D L S +DD VKIWD + TLE
Sbjct: 516 NWVRSVVFSH--DSRLLASASDDMTVKIWDTATGSLENTLE 554
Score = 219 (82.2 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 60/212 (28%), Positives = 100/212 (47%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKF 65
++ L D V P + +LAS + V +W+ T ++ E + VR+ F
Sbjct: 423 LQNVLEGHDDCVNSVSFSP-DSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVF 481
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
I + SDDM V +++ T+ ++ E+H ++VR V L ++SDDM +K+
Sbjct: 482 SHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKI 541
Query: 126 WNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
W+ + + EGH V + +P D+ ASAS D TVK+W + + T +G
Sbjct: 542 WDTATG-SLENTLEGHDDRVNSVSFSP-DSRLLASASDDGTVKIWYAATGTVQHTFDGSG 599
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
+ + + H + L S DD VKIWD +
Sbjct: 600 RVAISLAFSHTSN--LLASAMDDGTVKIWDME 629
Score = 192 (72.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 59/200 (29%), Positives = 92/200 (46%)
Query: 30 MLASLY-NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNY-- 86
+LAS +G V +W+ T+ + E + V++ F + + SDD V +++
Sbjct: 277 LLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTAT 336
Query: 87 NTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVM 146
TL+R + H+D VR V + + S+D +++W + FE H VM
Sbjct: 337 GTLQRM--LKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTG-LLRHTFEDHEDSVM 393
Query: 147 QIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGA 206
+ D+ ASAS VK+W + S LEGH+ VN V + D L S +
Sbjct: 394 AVSF-AHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSF--SPDSRLLASAS 450
Query: 207 DDRLVKIWDYQNKTCVQTLE 226
DDR VKIW + +TLE
Sbjct: 451 DDRTVKIWHAATGSLQRTLE 470
Score = 192 (72.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 52/198 (26%), Positives = 90/198 (45%)
Query: 29 WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
W ++ + + V+ + F+ D V + F + + S D V +++ T
Sbjct: 235 WNISGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTAT 294
Query: 89 LERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQI 148
++ E H+++V+ V L ++SDD +K+W+ Q++ +GH V +
Sbjct: 295 SFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATG-TLQRMLKGHNDSVRSV 353
Query: 149 VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADD 208
V + D+ AS S DRTV++W+ + T E HE V V + H D L S +D
Sbjct: 354 VFS-HDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAH--DSRRLASASDG 410
Query: 209 RLVKIWDYQNKTCVQTLE 226
VKIWD + + LE
Sbjct: 411 GNVKIWDTRTGSLQNVLE 428
Score = 154 (59.3 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 48/181 (26%), Positives = 82/181 (45%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKF 65
++R L +D V+ + + ++AS + V +W+ T + E D VR+ F
Sbjct: 465 LQRTLEGHNDWVRSV-VFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVF 523
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+ + SDDM V +++ T ++ E H D V V+ P L ++SDD +K+
Sbjct: 524 SHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKI 583
Query: 126 WNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GH 184
W + Q F+G + + + +N ASA D TVK+W + S T + H
Sbjct: 584 W-YAATGTVQHTFDGSGRVAISLAFS-HTSNLLASAMDDGTVKIWDMEIYSLRHTFDLDH 641
Query: 185 E 185
E
Sbjct: 642 E 642
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 224 (83.9 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 61/219 (27%), Positives = 104/219 (47%)
Query: 5 LDIK-RK-LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRA 62
++IK RK L +V C D P + +++S +G + +W+ T + + + A
Sbjct: 58 VNIKPRKVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMA 117
Query: 63 AKFVPRKNWIVTGSDDMQVCVFNYNTLERF----HSFEAHSDYVRCVAVHP-TQPFLLTS 117
+ P N++ G D +V V+ + E + H+ Y+ C ++P + +LT
Sbjct: 118 CAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSC-CIYPNSDQQILTG 176
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN-NTFASASLDRTVKVWQLGSAS 176
S D LW+ E Q F GH+ VM I + P + NTF S S DR +W + S
Sbjct: 177 SGDSTCALWDVESGQLLQS-FHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGH 235
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ EGH+ VN V ++ GD + +G+DD +++D
Sbjct: 236 VVQSFEGHQSDVNSVKFHPCGDA--IATGSDDSSCRLYD 272
Score = 154 (59.3 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 55/212 (25%), Positives = 91/212 (42%)
Query: 8 KRKLTARSDRVKCCDLHP-TEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
KR + + + CC ++P ++ +L + +W+ E+ Q ++SF V A
Sbjct: 151 KRTVGTHTSYMSCC-IYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLA 209
Query: 67 PRK--NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIK 124
P + N V+GS D +++ + SFE H V V HP + T SDD +
Sbjct: 210 PNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCR 269
Query: 125 LWNWEKAWACQQVF--EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE 182
L++ +A VF E V + + FA + D TV +W + L
Sbjct: 270 LYDM-RADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYN-DYTVNLWDTLKSERVCLLY 327
Query: 183 GHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
GHE V+CV G L +G+ D +++W
Sbjct: 328 GHENKVSCVQVSPDGTA--LSTGSWDYTIRVW 357
Score = 129 (50.5 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 38/163 (23%), Positives = 71/163 (43%)
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P K I++ S D ++ +++ T + H+ + ++ A P+ F+ D + ++
Sbjct: 80 PDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVY 139
Query: 127 ---NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+ E+ A ++ HT Y M I P + + S D T +W + S + G
Sbjct: 140 PITSDEEMAAKKRTVGTHTSY-MSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHG 198
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
H V +D +SG+ DR+ IWD ++ VQ+ E
Sbjct: 199 HSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFE 241
Score = 118 (46.6 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 38/148 (25%), Positives = 66/148 (44%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSDDMLIKLWNWE 129
I+TGS D +++ + + SF HS V + + P + ++ S D + +W+
Sbjct: 173 ILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMR 232
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN--FTLEGHEKG 187
Q FEGH V + +P + A+ S D + +++ + + F E G
Sbjct: 233 SGHVVQS-FEGHQSDVNSVKFHPC-GDAIATGSDDSSCRLYDMRADREVAVFAKESIIFG 290
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWD 215
VN VD+ G L +G +D V +WD
Sbjct: 291 VNSVDFSVSGR--LLFAGYNDYTVNLWD 316
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 53/221 (23%), Positives = 105/221 (47%)
Query: 4 RLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAA 63
RL+++ L V D+ P+ M +S + H+ +W+ E+ + +++ + + +
Sbjct: 53 RLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSV 112
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI 123
F P + TGS +V +F T ++ +S + ++ +A P +L + + D +I
Sbjct: 113 AFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+++ EGH + + +P D+ +AS D +K++++ AS TL G
Sbjct: 173 NIFDIATG-KLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYEVQHASLAATLSG 230
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
H V V + D + +S + D+ VK+WD +TCV T
Sbjct: 231 HGSWVLNVAF--SPDDTHFVSSSSDKSVKVWDVSARTCVHT 269
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 49/191 (25%), Positives = 95/191 (49%)
Query: 25 PTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVF 84
P + + G V+++ ET + S + + + + P ++ +G+ D + +F
Sbjct: 116 PDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
+ T + H+ E H+ +R + P L+T+SDD IK++ + A + GH +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHA-SLAATLSGHGSW 234
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLIS 204
V+ + +P D + F S+S D++VKVW + + + T H+ V V Y G K ++S
Sbjct: 235 VLNVAFSPDDTH-FVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSK--IVS 291
Query: 205 GADDRLVKIWD 215
ADD+ + ++D
Sbjct: 292 VADDQEIHVYD 302
Score = 119 (46.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 39/187 (20%), Positives = 81/187 (43%)
Query: 42 WNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDY 101
W+ E + + E L V + P N + + S D + +++ + ++ + +A
Sbjct: 49 WSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVD 108
Query: 102 VRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASA 161
VA P L T S + ++ E + + +++ I +P D AS
Sbjct: 109 AWSVAFSPDSQHLATGSHVGKVNIFGVETGKK-EYSLDTRGKFILSIAYSP-DGKYLASG 166
Query: 162 SLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
++D + ++ + + TLEGH + + + D L++ +DD +KI++ Q+ +
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTF--SPDSQLLVTASDDGYIKIYEVQHASL 224
Query: 222 VQTLESG 228
TL SG
Sbjct: 225 AATL-SG 230
Score = 118 (46.6 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 41/157 (26%), Positives = 73/157 (46%)
Query: 72 IVTGS-DDM-QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+++GS DD+ +V ++ LE + E H V V V P+ + +SS D I+LW+ E
Sbjct: 35 VISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLE 94
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ + G + +P D+ A+ S V ++ + + ++L+ K +
Sbjct: 95 SGKQIRAIDAGPVD-AWSVAFSP-DSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFIL 152
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ Y D YL SGA D ++ I+D + TLE
Sbjct: 153 SIAY--SPDGKYLASGAIDGIINIFDIATGKLLHTLE 187
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 225 (84.3 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 67/231 (29%), Positives = 103/231 (44%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
+KLT + HP M + + + VW++ET Q ++ + V
Sbjct: 100 QKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAA 159
Query: 69 KNWIVTGSDDMQVCVFNYN-TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
+V+ S D+ + ++++ T + S + H V V PT F+L++S D IK W+
Sbjct: 160 GKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWD 219
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
+ C F GH +V I I+ D FASASLD+TV VW + S L HE
Sbjct: 220 ISTGY-CVYTFRGHNDWVRMIRIS-NDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHA 277
Query: 188 VNCVDY-----YHG--GDKP------YLISGADDRLVKIWDYQNKTCVQTL 225
V CV++ Y G +P L SG+ DR +K W+ + TL
Sbjct: 278 VECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTL 328
Score = 188 (71.2 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 54/236 (22%), Positives = 113/236 (47%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNH-ETNQNVKSFEVCDLPVRAAKF 65
++R L +D V + +++ + + +W+ +T +KS + + V + F
Sbjct: 140 LERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTF 199
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P +++++ S D + ++ +T ++F H+D+VR + + ++S D + +
Sbjct: 200 LPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTV 259
Query: 126 WNWEKAWACQQVFEGHTHYVMQI-------VIN-----PKDNNTFA--SASLDRTVKVWQ 171
W++ A + V H H V + N P+ N+T S S DR++K W
Sbjct: 260 WSFATKSA-KLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWN 318
Query: 172 LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
+ + FTL HE V + ++ G YLIS ADD+ +++W+ + C++ +E+
Sbjct: 319 INTGDVLFTLLAHENWVRGLAFHPKGK--YLISVADDKTLRVWELSAQRCMKAIEA 372
Score = 143 (55.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 28/100 (28%), Positives = 54/100 (54%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+ +GS D + +N NT + + AH ++VR +A HP +L++ +DD +++W A
Sbjct: 305 LFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELS-A 363
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
C + E H H+V + + + + + S+D + KVW+
Sbjct: 364 QRCMKAIEAHEHFVSTVAFH-QTSPFVITGSVDMSCKVWE 402
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
+ WN T + + + VR F P+ ++++ +DD + V+ + + EAH
Sbjct: 314 IKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAH 373
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
+V VA H T PF++T S DM K+W
Sbjct: 374 EHFVSTVAFHQTSPFVITGSVDMSCKVW 401
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 231 (86.4 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 58/212 (27%), Positives = 95/212 (44%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
RKL S V P ++L+ + V +W+ +T + S++ PV KF P
Sbjct: 511 RKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPL 570
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW 128
++ VT S D ++ + + F H + V CV HP ++ T S D ++W+
Sbjct: 571 GHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDV 630
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
C +VF GHT+ V + ++P D AS D + VW +GS ++ GH +
Sbjct: 631 HTG-NCVRVFLGHTNSVNCLAVSP-DGRWLASGGEDGIICVWDIGSGRRLKSMRGHARA- 687
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 220
+ D L+SG D V++WD + T
Sbjct: 688 SLYSLAFSRDGTVLVSGCADNSVRVWDVKKNT 719
Score = 185 (70.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 43/172 (25%), Positives = 82/172 (47%)
Query: 44 HETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVR 103
H+ +N + PV F P ++++ S+D V +++ +T S++ H+ V
Sbjct: 504 HKPQENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVW 563
Query: 104 CVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASL 163
V P + +T+S D +LW + + + +F GH + V + +P N F +S
Sbjct: 564 DVKFSPLGHYFVTASHDQTARLWATDHIYPLR-IFAGHINDVDCVEFHPNSNYVFTGSS- 621
Query: 164 DRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
D+T ++W + + + GH VNC+ D +L SG +D ++ +WD
Sbjct: 622 DKTCRMWDVHTGNCVRVFLGHTNSVNCLAV--SPDGRWLASGGEDGIICVWD 671
Score = 184 (69.8 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 50/184 (27%), Positives = 84/184 (45%)
Query: 44 HETNQNVKSFEVCD-LPVRAAKFVPR--KNWIVTGSDDMQVCVFN-YNTLERFHSFEAHS 99
H TN N+ E D + AA F K W + G V + + E HS
Sbjct: 458 HNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHS 517
Query: 100 DYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFA 159
V V+ P +LL+ S+D ++LW+ + A ++GHT V + +P + F
Sbjct: 518 GPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVS-YKGHTQPVWDVKFSPL-GHYFV 575
Query: 160 SASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK 219
+AS D+T ++W P GH V+CV+++ + Y+ +G+ D+ ++WD
Sbjct: 576 TASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSN--YVFTGSSDKTCRMWDVHTG 633
Query: 220 TCVQ 223
CV+
Sbjct: 634 NCVR 637
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 229 (85.7 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 56/210 (26%), Positives = 98/210 (46%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L S V P ++L+S + + +W+ + N N+ ++ + PV A+F P +
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+ + S D +++ + ++ H V CV HP ++ T S D ++LW+ +
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQT 533
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
C ++F GH V+ + ++P D AS D T+ +W L +A L GH V
Sbjct: 534 G-ECVRIFIGHRSMVLSLAMSP-DGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWS 591
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDYQNKT 220
+ Y G+ L SG+ D VK+WD + T
Sbjct: 592 LSY--SGEGSLLASGSADCTVKLWDVTSST 619
Score = 179 (68.1 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 41/126 (32%), Positives = 65/126 (51%)
Query: 98 HSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNT 157
HS V P F+L+SS D I+LW+ K A ++GH + V +P +
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWS-TKLNANLVCYKGHNYPVWDAQFSPF-GHY 474
Query: 158 FASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
FAS S DRT ++W + P + GH V+CV ++ + Y+ +G+ D+ V++WD Q
Sbjct: 475 FASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCN--YIATGSSDKTVRLWDVQ 532
Query: 218 NKTCVQ 223
CV+
Sbjct: 533 TGECVR 538
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/167 (21%), Positives = 73/167 (43%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV +A F P +++++ S D + +++ ++ H+ V P + + S
Sbjct: 420 PVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCS 479
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
D ++W+ ++ + + GH V + +P + N A+ S D+TV++W + +
Sbjct: 480 HDRTARIWSMDRIQPLR-IMAGHLSDVDCVQWHP-NCNYIATGSSDKTVRLWDVQTGECV 537
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
GH V + D Y+ SG +D + +WD C+ L
Sbjct: 538 RIFIGHRSMV--LSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPL 582
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 53/221 (23%), Positives = 102/221 (46%)
Query: 4 RLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAA 63
RLD++ L V D+ T P +S + H+ +W+ E + +KS + +
Sbjct: 53 RLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL 112
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI 123
F P ++ TG+ +V +F + ++ +S + ++ +A P +L + + D +I
Sbjct: 113 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+++ EGH + + +P D+ +AS D +K++ + A+ TL G
Sbjct: 173 NIFDIATG-KLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
H V V + D + +S + D+ VK+WD +TCV T
Sbjct: 231 HASWVLNVAFCP--DDTHFVSSSSDKSVKVWDVGTRTCVHT 269
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 56/209 (26%), Positives = 102/209 (48%)
Query: 17 RVKCCDLHPTEPWMLA----SLYN------GHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++K D P + W LA S Y G V+++ E+ + S + + + +
Sbjct: 98 QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYS 157
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P ++ +G+ D + +F+ T + H+ E H+ +R + P L+T+SDD IK++
Sbjct: 158 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + A GH +V+ + P D + F S+S D++VKVW +G+ + T H+
Sbjct: 218 DVQHA-NLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVKVWDVGTRTCVHTFFDHQD 275
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
V V Y G K ++S DD+ + I+D
Sbjct: 276 QVWGVKYNGNGSK--IVSVGDDQEIHIYD 302
Score = 120 (47.3 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 43/157 (27%), Positives = 71/157 (45%)
Query: 72 IVTGS-DDM-QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+VTGS DD+ +V + L+ S E H V V + T P +SS D I+LW+ E
Sbjct: 35 VVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 94
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ + G + +P D+ A+ + V ++ + S ++L+ K +
Sbjct: 95 NGKQIKSIDAGPVD-AWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL 152
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ Y D YL SGA D ++ I+D + TLE
Sbjct: 153 SIAY--SPDGKYLASGAIDGIINIFDIATGKLLHTLE 187
Score = 112 (44.5 bits), Expect = 0.00035, P = 0.00035
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 151 NPKDNN-TFASASLDRTVKVWQLGSASPN--FTLEGHEKGVNCVDYYHGGDKPYLISGAD 207
N K+N+ T + SLD VKVW+ + ++LEGH+ GV VD H P S +
Sbjct: 27 NKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH--TLPIAASSSL 84
Query: 208 DRLVKIWDYQNKTCVQTLESG 228
D +++WD +N ++++++G
Sbjct: 85 DAHIRLWDLENGKQIKSIDAG 105
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 53/221 (23%), Positives = 102/221 (46%)
Query: 4 RLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAA 63
RLD++ L V D+ T P +S + H+ +W+ E + +KS + +
Sbjct: 53 RLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL 112
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI 123
F P ++ TG+ +V +F + ++ +S + ++ +A P +L + + D +I
Sbjct: 113 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+++ EGH + + +P D+ +AS D +K++ + A+ TL G
Sbjct: 173 NIFDIATG-KLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
H V V + D + +S + D+ VK+WD +TCV T
Sbjct: 231 HASWVLNVAFCP--DDTHFVSSSSDKSVKVWDVGTRTCVHT 269
Score = 185 (70.2 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 53/201 (26%), Positives = 96/201 (47%)
Query: 17 RVKCCDLHPTEPWMLA----SLYN------GHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++K D P + W LA S Y G V+++ E+ + S + + + +
Sbjct: 98 QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYS 157
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P ++ +G+ D + +F+ T + H+ E H+ +R + P L+T+SDD IK++
Sbjct: 158 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + A GH +V+ + P D + F S+S D++VKVW +G+ + T H+
Sbjct: 218 DVQHA-NLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVKVWDVGTRTCVHTFFDHQD 275
Query: 187 GVNCVDYYHGGDKPYLISGAD 207
V V Y G K ++S D
Sbjct: 276 QVWGVKYNGNGSK--IVSVGD 294
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 43/157 (27%), Positives = 71/157 (45%)
Query: 72 IVTGS-DDM-QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+VTGS DD+ +V + L+ S E H V V + T P +SS D I+LW+ E
Sbjct: 35 VVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 94
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ + G + +P D+ A+ + V ++ + S ++L+ K +
Sbjct: 95 NGKQIKSIDAGPVD-AWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL 152
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ Y D YL SGA D ++ I+D + TLE
Sbjct: 153 SIAY--SPDGKYLASGAIDGIINIFDIATGKLLHTLE 187
Score = 112 (44.5 bits), Expect = 0.00033, P = 0.00033
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 151 NPKDNN-TFASASLDRTVKVWQLGSASPN--FTLEGHEKGVNCVDYYHGGDKPYLISGAD 207
N K+N+ T + SLD VKVW+ + ++LEGH+ GV VD H P S +
Sbjct: 27 NKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH--TLPIAASSSL 84
Query: 208 DRLVKIWDYQNKTCVQTLESG 228
D +++WD +N ++++++G
Sbjct: 85 DAHIRLWDLENGKQIKSIDAG 105
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 54/221 (24%), Positives = 103/221 (46%)
Query: 4 RLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAA 63
+LD++ L V D+ T +S + H+ +W+ ET + +KS + + +
Sbjct: 53 KLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSL 112
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI 123
F P ++ TGS +V +F T ++ +S + ++ +A P +L + + D +I
Sbjct: 113 AFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+++ EGH + + +P D+ +AS D +K++ + A+ TL G
Sbjct: 173 NIFDIATG-KLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
H V V + D + +S + D+ VK+WD +TCV T
Sbjct: 231 HGSWVLNVAFCP--DDTHFVSSSSDKSVKVWDAGTRTCVHT 269
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 55/209 (26%), Positives = 100/209 (47%)
Query: 17 RVKCCDLHPTEPWMLA----------SLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++K D P + W LA + G V+++ ET + S + + + +
Sbjct: 98 QIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYS 157
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P ++ +G+ D + +F+ T + H+ E H+ +R + P L+T+SDD IK++
Sbjct: 158 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + A GH +V+ + P D + F S+S D++VKVW G+ + T H+
Sbjct: 218 DVQHA-NLAGTLSGHGSWVLNVAFCPDDTH-FVSSSSDKSVKVWDAGTRTCVHTFFDHQD 275
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
V V Y G K ++S DD+ + I+D
Sbjct: 276 QVWGVKYNGSGSK--IVSVGDDQEIHIYD 302
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 41/187 (21%), Positives = 78/187 (41%)
Query: 42 WNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDY 101
WN E + E L V + + + S D + +++ T ++ S +A
Sbjct: 49 WNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVD 108
Query: 102 VRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASA 161
+A P FL T S + ++ E + + +++ I +P D AS
Sbjct: 109 AWSLAFSPDSQFLATGSHVGKVNIFGVETGKK-EYSLDTRGKFILSIAYSP-DGKYLASG 166
Query: 162 SLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
++D + ++ + + TLEGH + + + D L++ +DD +KI+D Q+
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTF--SPDSQLLVTASDDGYIKIYDVQHANL 224
Query: 222 VQTLESG 228
TL SG
Sbjct: 225 AGTL-SG 230
Score = 113 (44.8 bits), Expect = 0.00027, P = 0.00027
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 151 NPKDNN-TFASASLDRTVKVWQLGSASPN--FTLEGHEKGVNCVDYYHGGDKPYLISGAD 207
N KD + T S SLD VKVW+ + +TLEGH+ GV VD H G S +
Sbjct: 27 NKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGS--IAASSSL 84
Query: 208 DRLVKIWDYQNKTCVQTLESG 228
D +++WD + ++++++G
Sbjct: 85 DAHIRLWDLETGKQIKSIDAG 105
Score = 110 (43.8 bits), Expect = 0.00060, P = 0.00060
Identities = 40/157 (25%), Positives = 71/157 (45%)
Query: 72 IVTGS-DDM-QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+++GS DD+ +V +N L+ + E H V V + T +SS D I+LW+ E
Sbjct: 35 VISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLE 94
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ + G + +P D+ A+ S V ++ + + ++L+ K +
Sbjct: 95 TGKQIKSIDAGPVD-AWSLAFSP-DSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFIL 152
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ Y D YL SGA D ++ I+D + TLE
Sbjct: 153 SIAY--SPDGKYLASGAIDGIINIFDIATGKLLHTLE 187
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 54/221 (24%), Positives = 103/221 (46%)
Query: 4 RLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAA 63
+LD++ L V D+ T +S + H+ +W+ ET + +KS + + +
Sbjct: 53 KLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSL 112
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI 123
F P ++ TGS +V +F T ++ +S + ++ +A P +L + + D +I
Sbjct: 113 AFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+++ EGH + + +P D+ +AS D +K++ + A+ TL G
Sbjct: 173 NIFDIATG-KLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
H V V + D + +S + D+ VK+WD +TCV T
Sbjct: 231 HGSWVLNVAFCP--DDTHFVSSSSDKSVKVWDAGTRTCVHT 269
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 55/209 (26%), Positives = 100/209 (47%)
Query: 17 RVKCCDLHPTEPWMLA----------SLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++K D P + W LA + G V+++ ET + S + + + +
Sbjct: 98 QIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYS 157
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P ++ +G+ D + +F+ T + H+ E H+ +R + P L+T+SDD IK++
Sbjct: 158 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + A GH +V+ + P D + F S+S D++VKVW G+ + T H+
Sbjct: 218 DVQHA-NLAGTLSGHGSWVLNVAFCPDDTH-FVSSSSDKSVKVWDAGTRTCVHTFFDHQD 275
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
V V Y G K ++S DD+ + I+D
Sbjct: 276 QVWGVKYNGSGSK--IVSVGDDQEIHIYD 302
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 41/187 (21%), Positives = 78/187 (41%)
Query: 42 WNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDY 101
WN E + E L V + + + S D + +++ T ++ S +A
Sbjct: 49 WNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVD 108
Query: 102 VRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASA 161
+A P FL T S + ++ E + + +++ I +P D AS
Sbjct: 109 AWSLAFSPDSQFLATGSHVGKVNIFGVETGKK-EYSLDTRGKFILSIAYSP-DGKYLASG 166
Query: 162 SLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
++D + ++ + + TLEGH + + + D L++ +DD +KI+D Q+
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTF--SPDSQLLVTASDDGYIKIYDVQHANL 224
Query: 222 VQTLESG 228
TL SG
Sbjct: 225 AGTL-SG 230
Score = 110 (43.8 bits), Expect = 0.00060, P = 0.00060
Identities = 40/157 (25%), Positives = 71/157 (45%)
Query: 72 IVTGS-DDM-QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+++GS DD+ +V +N L+ + E H V V + T +SS D I+LW+ E
Sbjct: 35 VISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLE 94
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ + G + +P D+ A+ S V ++ + + ++L+ K +
Sbjct: 95 TGKQIKSIDAGPVD-AWSLAFSP-DSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFIL 152
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ Y D YL SGA D ++ I+D + TLE
Sbjct: 153 SIAY--SPDGKYLASGAIDGIINIFDIATGKLLHTLE 187
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 215 (80.7 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 45/190 (23%), Positives = 94/190 (49%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G+V ++ + +++K+ E + KF N + + S D + +++ H +
Sbjct: 24 SGNVPIY--KPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRY 81
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN 155
E HS + +A + ++SDD +++W+ + C +V GHT++V + NP +
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPP-S 140
Query: 156 NTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
N S S D T+++W++ + ++ H ++ V + G ++S + D KIWD
Sbjct: 141 NLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGS--LIVSASHDGSCKIWD 198
Query: 216 YQNKTCVQTL 225
+ TC++TL
Sbjct: 199 AKEGTCLKTL 208
Score = 141 (54.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 42/169 (24%), Positives = 77/169 (45%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
V F P N IV+GS D + ++ T + +AHS + V + ++++S
Sbjct: 131 VFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASH 190
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS-ASLDRTVKVWQLGSASPN 178
D K+W+ ++ + + + + V +P N F A+LD T+K+ +
Sbjct: 191 DGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSP--NGKFILVATLDSTLKLSNYATGKFL 248
Query: 179 FTLEGHEKGVNCV-DYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
GH V C+ + + Y++SG++D V +WD Q + +Q LE
Sbjct: 249 KVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLE 297
Score = 140 (54.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 39/168 (23%), Positives = 83/168 (49%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLP-VRAAKFVP 67
R + A S + + ++++ ++G +W+ + +K+ P V AKF P
Sbjct: 164 RMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSP 223
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCV--AVHPTQ-PFLLTSSDDMLIK 124
+I+ + D + + NY T + + H++ V C+ A T ++++ S+D +
Sbjct: 224 NGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVY 283
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASAS-LDRTVKVWQ 171
LW+ + Q++ EGHT V+ + +P N +S + LD+T+++W+
Sbjct: 284 LWDLQARNILQRL-EGHTDAVISVSCHPVQNEISSSGNHLDKTIRIWK 330
Score = 130 (50.8 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 34/143 (23%), Positives = 67/143 (46%)
Query: 86 YNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYV 145
Y + E H+ + CV L ++S D + LW+ ++ +EGH+ +
Sbjct: 30 YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATN-YSLIHRYEGHSSGI 88
Query: 146 MQIVINPKDNNTFASASLDRTVKVWQLGSASPNF-TLEGHEKGVNCVDYYHGGDKPYLIS 204
+ + D++ SAS D T+++W S L GH V CV++ + ++S
Sbjct: 89 SDLAWS-SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN--LIVS 145
Query: 205 GADDRLVKIWDYQNKTCVQTLES 227
G+ D ++IW+ + CV+ +++
Sbjct: 146 GSFDETIRIWEVKTGKCVRMIKA 168
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 46/208 (22%), Positives = 87/208 (41%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L ++ V C + +P +++ ++ + +W +T + V+ + +P+ + F +
Sbjct: 124 LRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGS 183
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSF-EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
IV+ S D +++ + + S V P F+L ++ D +KL N+
Sbjct: 184 LIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYA 243
Query: 130 KAWACQQVFEGHTHYVMQIV--INPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
+V+ GHT+ V I + + S S D V +W L + + LEGH
Sbjct: 244 TG-KFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDA 302
Query: 188 VNCVDYYHGGDKPYLISGAD-DRLVKIW 214
V V H SG D+ ++IW
Sbjct: 303 VISVSC-HPVQNEISSSGNHLDKTIRIW 329
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 52/221 (23%), Positives = 102/221 (46%)
Query: 4 RLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAA 63
+LD++ L V D+ T P +S + H+ +W+ E + +KS + +
Sbjct: 53 KLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL 112
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI 123
F P ++ TG+ +V +F + ++ +S + ++ +A P +L + + D +I
Sbjct: 113 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+++ EGH + + +P D+ +AS D +K++ + A+ TL G
Sbjct: 173 NIFDIATG-KLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
H V V + D + +S + D+ VK+WD +TCV T
Sbjct: 231 HASWVLNVAFCP--DDTHFVSSSSDKSVKVWDVGTRTCVHT 269
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 56/209 (26%), Positives = 102/209 (48%)
Query: 17 RVKCCDLHPTEPWMLA----SLYN------GHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++K D P + W LA S Y G V+++ E+ + S + + + +
Sbjct: 98 QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYS 157
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P ++ +G+ D + +F+ T + H+ E H+ +R + P L+T+SDD IK++
Sbjct: 158 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + A GH +V+ + P D + F S+S D++VKVW +G+ + T H+
Sbjct: 218 DVQHA-NLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVKVWDVGTRTCVHTFFDHQD 275
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
V V Y G K ++S DD+ + I+D
Sbjct: 276 QVWGVKYNGNGSK--IVSVGDDQEIHIYD 302
Score = 120 (47.3 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 43/157 (27%), Positives = 71/157 (45%)
Query: 72 IVTGS-DDM-QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+VTGS DD+ +V + L+ S E H V V + T P +SS D I+LW+ E
Sbjct: 35 VVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 94
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ + G + +P D+ A+ + V ++ + S ++L+ K +
Sbjct: 95 NGKQIKSIDAGPVD-AWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL 152
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ Y D YL SGA D ++ I+D + TLE
Sbjct: 153 SIAY--SPDGKYLASGAIDGIINIFDIATGKLLHTLE 187
Score = 113 (44.8 bits), Expect = 0.00027, P = 0.00027
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 151 NPKDNN-TFASASLDRTVKVWQLGSASPN--FTLEGHEKGVNCVDYYHGGDKPYLISGAD 207
N K+N+ T + SLD VKVW+ + ++LEGH+ GV VD H P S +
Sbjct: 27 NKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISH--TLPIAASSSL 84
Query: 208 DRLVKIWDYQNKTCVQTLESG 228
D +++WD +N ++++++G
Sbjct: 85 DAHIRLWDLENGKQIKSIDAG 105
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 52/221 (23%), Positives = 102/221 (46%)
Query: 4 RLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAA 63
RLD++ L V D+ T P +S + H+ +W+ + + +KS + +
Sbjct: 53 RLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTL 112
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI 123
F P ++ TG+ +V +F + ++ +S + ++ +A P +L + + D +I
Sbjct: 113 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+++ EGH + + +P D+ +AS D +K++ + A+ TL G
Sbjct: 173 NIFDIATG-KLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
H V V + D + +S + D+ VK+WD +TCV T
Sbjct: 231 HASWVLNVAFCP--DDTHFVSSSSDKSVKVWDVGTRTCVHT 269
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 55/209 (26%), Positives = 102/209 (48%)
Query: 17 RVKCCDLHPTEPWMLA----SLYN------GHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++K D P + W LA S Y G V+++ E+ + S + + + +
Sbjct: 98 QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYS 157
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P ++ +G+ D + +F+ T + H+ E H+ +R + P L+T+SDD IK++
Sbjct: 158 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + A GH +V+ + P D + F S+S D++VKVW +G+ + T H+
Sbjct: 218 DVQHA-NLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVKVWDVGTRTCVHTFFDHQD 275
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
V V Y G K ++S DD+ + ++D
Sbjct: 276 QVWGVKYNGNGSK--IVSVGDDQEIHVYD 302
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 42/157 (26%), Positives = 70/157 (44%)
Query: 72 IVTGSDDMQVCVFNY--NTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+VTGS D V V+ + L+ S E H V V + T P +SS D I+LW+ +
Sbjct: 35 VVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLD 94
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ + G + +P D+ A+ + V ++ + S ++L+ K +
Sbjct: 95 NGKQIKSIDAGPVD-AWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL 152
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ Y D YL SGA D ++ I+D + TLE
Sbjct: 153 SIAY--SPDGKYLASGAIDGIINIFDIATGKLLHTLE 187
Score = 109 (43.4 bits), Expect = 0.00079, P = 0.00079
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 151 NPKDNN-TFASASLDRTVKVWQLGSASPN--FTLEGHEKGVNCVDYYHGGDKPYLISGAD 207
N K+N+ T + SLD VKVW+ + ++LEGH+ GV VD H P S +
Sbjct: 27 NKKENSETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDISH--TLPIAASSSL 84
Query: 208 DRLVKIWDYQNKTCVQTLESG 228
D +++WD N ++++++G
Sbjct: 85 DAHIRLWDLDNGKQIKSIDAG 105
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 53/221 (23%), Positives = 103/221 (46%)
Query: 4 RLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAA 63
RL+++ L V D+ P+ M +S + H+ +W+ E+ + ++S + + +
Sbjct: 53 RLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSV 112
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI 123
F P + TGS +V +F T ++ +S + ++ +A P +L + + D +I
Sbjct: 113 AFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+++ EGH + + + D+ +AS D +K++ + AS TL G
Sbjct: 173 NIFDIATG-KLLHTLEGHAMPIRSLTFST-DSQLLVTASDDGYIKIYDVQHASLAATLSG 230
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
H V V + D + +S + D+ VK+WD +TCV T
Sbjct: 231 HGSWVLNVAF--SPDDAHFVSSSSDKSVKVWDVSARTCVHT 269
Score = 191 (72.3 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 47/191 (24%), Positives = 94/191 (49%)
Query: 25 PTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVF 84
P + + G V+++ ET + S + + + + P ++ +G+ D + +F
Sbjct: 116 PDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
+ T + H+ E H+ +R + L+T+SDD IK+++ + A + GH +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHA-SLAATLSGHGSW 234
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLIS 204
V+ + +P D + F S+S D++VKVW + + + T H+ V V Y G K ++S
Sbjct: 235 VLNVAFSPDDAH-FVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSK--IVS 291
Query: 205 GADDRLVKIWD 215
DD+ + ++D
Sbjct: 292 VGDDQEIHVYD 302
Score = 124 (48.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 41/187 (21%), Positives = 81/187 (43%)
Query: 42 WNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDY 101
W+ E + + E L V + P N + + S D + +++ + ++ S +A
Sbjct: 49 WSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVD 108
Query: 102 VRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASA 161
VA P L T S + ++ E + + +++ I +P D AS
Sbjct: 109 AWSVAFSPDSQHLATGSHVGKVNIFGVETGKK-EYSLDTRGKFILSIAYSP-DGKYLASG 166
Query: 162 SLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
++D + ++ + + TLEGH + + + D L++ +DD +KI+D Q+ +
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTF--STDSQLLVTASDDGYIKIYDVQHASL 224
Query: 222 VQTLESG 228
TL SG
Sbjct: 225 AATL-SG 230
Score = 119 (46.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 41/157 (26%), Positives = 73/157 (46%)
Query: 72 IVTGS-DDM-QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+++GS DD+ +V ++ LE + E H V V V P+ + +SS D I+LW+ E
Sbjct: 35 VISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLE 94
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ + G + +P D+ A+ S V ++ + + ++L+ K +
Sbjct: 95 SGKQIRSIDAGPVD-AWSVAFSP-DSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFIL 152
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ Y D YL SGA D ++ I+D + TLE
Sbjct: 153 SIAY--SPDGKYLASGAIDGIINIFDIATGKLLHTLE 187
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 225 (84.3 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 57/211 (27%), Positives = 109/211 (51%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFE-VCDLPVRAAKFVPRK 69
L + V C + E ++ + Y+ + VW+ T + +KSFE V ++ R
Sbjct: 950 LVGHTGEVNC--VVANEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSGR- 1006
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
++ +G +D + V++ TL + + H D+V +++H T +L ++S D +IK+W+
Sbjct: 1007 -YLFSGGNDQIIYVWDTETLSMLFNMQGHEDWV--LSLHCTASYLFSTSKDNVIKIWDLS 1063
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL-EGHEKGV 188
++C +GH + V V+ KD + S S D ++KVW L + +T+ + H GV
Sbjct: 1064 N-FSCIDTLKGHWNSVSSCVV--KDRYLY-SGSEDNSIKVWDLDTLECVYTIPKSHSLGV 1119
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNK 219
C+ ++ +IS A D +K+W++Q+K
Sbjct: 1120 KCLMVFNN----QIISAAFDGSIKVWEWQSK 1146
Score = 169 (64.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 45/162 (27%), Positives = 83/162 (51%)
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEA-HSDYVRCVAVHPTQPFLLTSSDDMLIK 124
V + ++ + S D + V++ +T + SFE H+ Y++ +A+ + +L + +D +I
Sbjct: 961 VANEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLAL--SGRYLFSGGNDQIIY 1018
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+W+ E + +GH +V+ + + S S D +K+W L + S TL+GH
Sbjct: 1019 VWDTETLSMLFNM-QGHEDWVLSLHCTA---SYLFSTSKDNVIKIWDLSNFSCIDTLKGH 1074
Query: 185 EKGVN-CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
V+ CV D+ YL SG++D +K+WD CV T+
Sbjct: 1075 WNSVSSCVVK----DR-YLYSGSEDNSIKVWDLDTLECVYTI 1111
Score = 166 (63.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 57/227 (25%), Positives = 103/227 (45%)
Query: 6 DIKRKLTARS--DRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAA 63
D+K T +S +RV + + A +G V+ + N N K + ++
Sbjct: 858 DLKCVSTIQSFRERVNSIAFFDNQKLLCAGYGDGTYRVF--DVNDNWKCLYTVNGHRKSI 915
Query: 64 KFVP-RKNWIVTGSDD--MQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDD 120
+ + N+I T S D ++V + + + H+ V CV + + +L + S D
Sbjct: 916 ESIACNSNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVAN--EKYLFSCSYD 973
Query: 121 MLIKLWNWEKAWACQQVFEG-HTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
IK+W+ + FEG HT Y+ + ++ + F+ + D+ + VW + S F
Sbjct: 974 KTIKVWDLSTFKEIKS-FEGVHTKYIKTLALSGR--YLFSGGN-DQIIYVWDTETLSMLF 1029
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++GHE V + H YL S + D ++KIWD N +C+ TL+
Sbjct: 1030 NMQGHEDWVLSL---HC-TASYLFSTSKDNVIKIWDLSNFSCIDTLK 1072
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 43/171 (25%), Positives = 72/171 (42%)
Query: 58 LPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTS 117
+P + +P N I G+ + F+ L+ + ++ + V +A Q L
Sbjct: 828 MPDILPELMPSDNTIKVGAKQLPKAEFSKKDLKCVSTIQSFRERVNSIAFFDNQKLLCAG 887
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
D ++++ W C GH + I N N F S S D T+KV + S +
Sbjct: 888 YGDGTYRVFDVNDNWKCLYTVNGHRKSIESIACN--SNYIFTS-SPDNTIKVHIIRSGNT 944
Query: 178 NF--TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
TL GH VNCV ++ YL S + D+ +K+WD +++ E
Sbjct: 945 KCIETLVGHTGEVNCVV----ANEKYLFSCSYDKTIKVWDLSTFKEIKSFE 991
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 222 (83.2 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 57/188 (30%), Positives = 98/188 (52%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
+ VW+ + + + + E D PV ++ +GS D + V++ TLE ++ E+H
Sbjct: 524 IKVWDLKKLRCIFTLEGHDKPVHTVLL--NDKYLFSGSSDKTIKVWDLKTLECKYTLESH 581
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
+ V+ + + + +L + S+D IK+W+ K + C +GHT +V I I N +
Sbjct: 582 ARAVKTLCI--SGQYLFSGSNDKTIKVWDL-KTFRCNYTLKGHTKWVTTICI--LGTNLY 636
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
S S D+T++VW L S + TL GH++ V ++ DK L + +DD +KIWD +
Sbjct: 637 -SGSYDKTIRVWNLKSLECSATLRGHDRWV---EHMVICDK-LLFTASDDNTIKIWDLET 691
Query: 219 KTCVQTLE 226
C TLE
Sbjct: 692 LRCNTTLE 699
Score = 196 (74.1 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 49/161 (30%), Positives = 82/161 (50%)
Query: 70 NWIVTGSDDMQVCVFNYNT--LERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
N + TG D + V++Y + +E + + H V + + +L + S D IK+W+
Sbjct: 471 NLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYN--DQYLFSGSSDHSIKVWD 528
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
+K C EGH V +++N D F+ +S D+T+KVW L + +TLE H +
Sbjct: 529 LKKL-RCIFTLEGHDKPVHTVLLN--DKYLFSGSS-DKTIKVWDLKTLECKYTLESHARA 584
Query: 188 VN--CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
V C+ G YL SG++D+ +K+WD + C TL+
Sbjct: 585 VKTLCIS----GQ--YLFSGSNDKTIKVWDLKTFRCNYTLK 619
Score = 184 (69.8 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 43/146 (29%), Positives = 76/146 (52%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
++ +GS+D + V++ T ++ + H+ +V + + T L + S D I++WN K
Sbjct: 594 YLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTN--LYSGSYDKTIRVWNL-K 650
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
+ C GH +V +VI K +AS D T+K+W L + N TLEGH V C
Sbjct: 651 SLECSATLRGHDRWVEHMVICDK---LLFTASDDNTIKIWDLETLRCNTTLEGHNATVQC 707
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDY 216
+ + DK +IS + D+ +++W +
Sbjct: 708 LAVWE--DKKCVISCSHDQSIRVWGW 731
Score = 170 (64.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 43/115 (37%), Positives = 61/115 (53%)
Query: 114 LLTSSDDMLIKLWNWEKA-WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
L T D I++++++ C Q +GH V I N D F+ +S D ++KVW L
Sbjct: 473 LFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYN--DQYLFSGSS-DHSIKVWDL 529
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
FTLEGH+K V+ V DK YL SG+ D+ +K+WD + C TLES
Sbjct: 530 KKLRCIFTLEGHDKPVHTVLL---NDK-YLFSGSSDKTIKVWDLKTLECKYTLES 580
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 47/193 (24%), Positives = 93/193 (48%)
Query: 32 ASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLER 91
+S + H+ +W+ ET + +KS + + F P +I TGS +V +F + ++
Sbjct: 81 SSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKK 140
Query: 92 FHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVIN 151
HS + ++ +A P +L + + D +I +++ EGH + + +
Sbjct: 141 EHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG-KLLHTLEGHAMPIRSLTFS 199
Query: 152 PKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLV 211
P D+ +AS D +K++ + A+ TL GH V V + D + +S + D+ +
Sbjct: 200 P-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAF--SPDDTHFVSSSSDKSI 256
Query: 212 KIWDYQNKTCVQT 224
K+WD +++CV T
Sbjct: 257 KVWDTSSRSCVNT 269
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 56/209 (26%), Positives = 101/209 (48%)
Query: 17 RVKCCDLHPTEPWMLA----SLYN------GHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++K D P + W +A S Y G V+++ E+ + S + + + +
Sbjct: 98 QIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYS 157
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P ++ +G+ D + +F+ T + H+ E H+ +R + P L+T+SDD IK++
Sbjct: 158 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + A GH +V+ + +P D + F S+S D+++KVW S S T H+
Sbjct: 218 DVQHA-NLAGTLSGHGSWVLSVAFSPDDTH-FVSSSSDKSIKVWDTSSRSCVNTFFDHQD 275
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
V V Y G K ++S DDR + I+D
Sbjct: 276 QVWSVKYNPTGSK--IVSAGDDRAIHIYD 302
Score = 113 (44.8 bits), Expect = 0.00027, P = 0.00027
Identities = 34/155 (21%), Positives = 69/155 (44%)
Query: 74 TGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWA 133
+ S D + +++ T ++ S +A VA P ++ T S + ++ E
Sbjct: 81 SSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKK 140
Query: 134 CQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY 193
+ + +++ I +P D AS ++D + ++ + + TLEGH + + +
Sbjct: 141 -EHSLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 194 YHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
D L++ +DD +KI+D Q+ TL SG
Sbjct: 199 --SPDSQLLVTASDDGYIKIYDVQHANLAGTL-SG 230
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 213 (80.0 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 56/220 (25%), Positives = 100/220 (45%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
HP M+++ + + VW++ET ++ + V+ F + + S DM + +
Sbjct: 52 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 111
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+++ E + H V VA+ P ++++S D IK+W + + C + F GH
Sbjct: 112 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHRE 170
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY-----YH--- 195
+V + N +D AS S D+TV+VW + + L HE V C+ + Y
Sbjct: 171 WVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 229
Query: 196 ----------GGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
G P+L+SG+ D+ +K+WD C+ TL
Sbjct: 230 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 269
Score = 197 (74.4 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 47/163 (28%), Positives = 84/163 (51%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV F P + +V+ S+D + V++Y T + + + H+D V+ ++ + L + S
Sbjct: 45 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 104
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
DM IKLW+++ + C + GH H V + I P ++ SAS D+T+K+W++ +
Sbjct: 105 ADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCV 162
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
T GH + V V G + S ++D+ V++W K C
Sbjct: 163 KTFTGHREWVRMVRPNQDGT--LIASCSNDQTVRVWVVATKEC 203
Score = 186 (70.5 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 55/240 (22%), Positives = 110/240 (45%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
D +R L +D V+ + + + + + +W+ + + +++ D V +
Sbjct: 76 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 135
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P + IV+ S D + ++ T +F H ++VR V + + + S+D +++
Sbjct: 136 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 195
Query: 126 W---NWE-KA-------------WACQQVFEGHTHYV-MQIVINPKDNNTFASASLDRTV 167
W E KA WA + + + + + K S S D+T+
Sbjct: 196 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 255
Query: 168 KVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
K+W + + TL GH+ V V +H G K +++S ADD+ +++WDY+NK C++TL +
Sbjct: 256 KMWDVSTGMCLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA 313
Score = 176 (67.0 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
++ H V V HP ++++S+D IK+W++E ++ +GHT V I +
Sbjct: 37 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 94
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
AS S D T+K+W T+ GH+ V+ V GD +++S + D+ +K
Sbjct: 95 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 152
Query: 213 IWDYQNKTCVQT 224
+W+ Q CV+T
Sbjct: 153 MWEVQTGYCVKT 164
Score = 144 (55.7 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 112 PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
PFLL+ S D IK+W+ C GH ++V ++ + S + D+T++VW
Sbjct: 244 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 301
Query: 172 LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ TL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 302 YKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 343
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 219 (82.2 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 59/205 (28%), Positives = 94/205 (45%)
Query: 28 PWMLASLYNGHVHV---WNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVF 84
PW +Y V W + ++K+F+ V +F N + TGS D + ++
Sbjct: 320 PWK--EVYKDRFKVGTNWKYG-RCSIKTFKGHTNGVMCLQF--EDNILATGSYDTTIKIW 374
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
+ T E + H +RC+ T+ L++ S D IK+WNW + C + GH
Sbjct: 375 DTETGEELRTLRGHESGIRCLQFDDTK--LISGSMDRTIKVWNW-RTGECISTYTGHRGG 431
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLIS 204
V+ + D + AS S+D+TVK+W S F+L GH VN V + S
Sbjct: 432 VIGLHF---DASILASGSVDKTVKIWNFEDKS-TFSLRGHTDWVNAVRV--DTSSRTVFS 485
Query: 205 GADDRLVKIWDYQNKTCVQTLESGI 229
+DD V++WD KTC++T +
Sbjct: 486 ASDDCTVRLWDLDTKTCIRTFHGHV 510
Score = 147 (56.8 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 48/228 (21%), Positives = 92/228 (40%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
R L ++C T+ +++ + + VWN T + + ++ V F
Sbjct: 383 RTLRGHESGIRCLQFDDTK--LISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF--D 438
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW 128
+ + +GS D V ++N+ F S H+D+V V V + + ++SDD ++LW+
Sbjct: 439 ASILASGSVDKTVKIWNFEDKSTF-SLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDL 497
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKD-----------NNTFASASLDRTVKVWQLGSA-S 176
+ C + F GH V Q+V P++ N+ ++ S D Q
Sbjct: 498 DTK-TCIRTFHGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTSGDADPPSIQASMGLE 556
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
PN D Y+++ A D +++W+ C++T
Sbjct: 557 PNAAYSQSSAFGTSFDNGRAAPPRYMVTSALDSTIRLWETTTGRCLRT 604
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 51/221 (23%), Positives = 102/221 (46%)
Query: 4 RLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAA 63
RL+++ L V D+ T P +S + H+ +W+ E + +KS + +
Sbjct: 53 RLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTL 112
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI 123
F P ++ TG+ +V +F + ++ +S + ++ +A P +L + + D +I
Sbjct: 113 AFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+++ EGH + + +P D+ +AS D +K++ + A+ TL G
Sbjct: 173 NIFDIATG-KLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
H V V + D + +S + D+ VK+WD +TC+ T
Sbjct: 231 HASWVLNVAFCP--DDTHFVSSSSDKSVKVWDVGTRTCIHT 269
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 48/191 (25%), Positives = 95/191 (49%)
Query: 25 PTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVF 84
P ++ + G V+++ E+ + S + + + + P ++ +G+ D + +F
Sbjct: 116 PDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
+ T + H+ E H+ +R + P L+T+SDD IK+++ + A GH +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA-NLAGTLSGHASW 234
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLIS 204
V+ + P D + F S+S D++VKVW +G+ + T H+ V V Y G K ++S
Sbjct: 235 VLNVAFCPDDTH-FVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSK--IVS 291
Query: 205 GADDRLVKIWD 215
DD+ + ++D
Sbjct: 292 VGDDQEIHVYD 302
Score = 123 (48.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 44/157 (28%), Positives = 71/157 (45%)
Query: 72 IVTGS-DDM-QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+VTGS DD+ +V + LE S E H V V + T P +SS D I+LW+ E
Sbjct: 35 VVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 94
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ + G + +P D+ A+ + V ++ + S ++L+ K +
Sbjct: 95 NGKQMKSIDAGPVD-AWTLAFSP-DSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFIL 152
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ Y D YL SGA D ++ I+D + TLE
Sbjct: 153 SIAY--SPDGKYLASGAIDGIINIFDIATGKLLHTLE 187
Score = 109 (43.4 bits), Expect = 0.00079, P = 0.00079
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 151 NPKDN-NTFASASLDRTVKVWQLGSA--SPNFTLEGHEKGVNCVDYYHGGDKPYLISGAD 207
N K+N T + SLD VKVW+ ++LEGH+ GV VD H P S +
Sbjct: 27 NKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISH--TLPIAASSSL 84
Query: 208 DRLVKIWDYQNKTCVQTLESG 228
D +++WD +N ++++++G
Sbjct: 85 DAHIRLWDLENGKQMKSIDAG 105
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 211 (79.3 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 51/195 (26%), Positives = 85/195 (43%)
Query: 21 CDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQ 80
C P ++L+ + +W+ ET N+ ++ + PV F P + T S D
Sbjct: 685 CSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRT 744
Query: 81 VCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEG 140
++ N + F H V HP +L T S+D +LW + C ++F G
Sbjct: 745 ARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTG-KCVRIFMG 803
Query: 141 HTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKP 200
H + + +P D A+A D +V +W L + ++GH K V +D+ G
Sbjct: 804 HRAPIYTVAFSP-DGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGS-- 860
Query: 201 YLISGADDRLVKIWD 215
L SG+ D V++WD
Sbjct: 861 ILASGSSDCTVRLWD 875
Score = 160 (61.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 92 FHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVIN 151
F +F HS V + P +LL+ S+D +LW+ E + ++GH V + +
Sbjct: 672 FKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSME-TMSNLVCYKGHNFPVWDVSFS 730
Query: 152 PKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLV 211
P FA+AS DRT ++W SP GH N V ++ + YL +G++D+
Sbjct: 731 PF-GFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNIN--YLATGSNDKSA 787
Query: 212 KIWDYQNKTCVQ 223
++W+ Q CV+
Sbjct: 788 RLWEIQTGKCVR 799
Score = 123 (48.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 35/168 (20%), Positives = 73/168 (43%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV F P ++++ S+D +++ T+ ++ H+ V V+ P + T+S
Sbjct: 681 PVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATAS 740
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
D +LW + ++F GH + +P + N A+ S D++ ++W++ +
Sbjct: 741 HDRTARLWTTNHI-SPLRIFTGHLSDCNTVRFHP-NINYLATGSNDKSARLWEIQTGKCV 798
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
GH + V + D L + +D V +WD V+ ++
Sbjct: 799 RIFMGHRAPIYTVAF--SPDGRLLATAGEDTSVILWDLSTGKKVKKMD 844
Score = 119 (46.9 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 35/137 (25%), Positives = 62/137 (45%)
Query: 41 VW--NHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
+W NH + + + + D +F P N++ TGS+D ++ T + F H
Sbjct: 747 LWTTNHISPLRIFTGHLSDC--NTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGH 804
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
+ VA P L T+ +D + LW+ +++ +GHT V + + D +
Sbjct: 805 RAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKM-DGHTKCVYSLDFSC-DGSIL 862
Query: 159 ASASLDRTVKVWQLGSA 175
AS S D TV++W + A
Sbjct: 863 ASGSSDCTVRLWDVKKA 879
Score = 36 (17.7 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHV 41
K+ A S + LH + +L L N ++H+
Sbjct: 374 KMCAYSFELLMSFLHQSNFILLLGLINQYIHI 405
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 218 (81.8 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 52/206 (25%), Positives = 93/206 (45%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
+L + S V P ++L+ + +W+ +T + +++ PV F P
Sbjct: 374 RLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFG 433
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
++ T S D +++ + + F H V CV HP ++LT S D +LW+
Sbjct: 434 HYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVH 493
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ + + VF GHT V + I P D +T ASA + + +W +G+ T+ GH +
Sbjct: 494 RGHSVR-VFNGHTQPVTAVAIAP-DGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIY 551
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWD 215
+ + + L+SG D V+ WD
Sbjct: 552 SLSFSR--ESTVLVSGGSDCTVRAWD 575
Score = 140 (54.3 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 46/226 (20%), Positives = 96/226 (42%)
Query: 15 SDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNV--KSFEVCDL-----------PVR 61
++ + C + P + ++ +W+ + ++ KS V D PV
Sbjct: 324 NNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVY 383
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
F P ++++ S+D +++ +T +++ H+ V VA P + T+S D
Sbjct: 384 GTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQ 443
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFA-SASLDRTVKVWQLGSASPNFT 180
+LW+ + + + VF GH V + +P N+ + + S D+T ++W +
Sbjct: 444 TAQLWSCDHIYPLR-VFAGHLSDVDCVTFHP--NSAYVLTGSSDKTCRLWDVHRGHSVRV 500
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDR-LVKIWDYQNKTCVQTL 225
GH + V V G + ++ AD L+ +WD ++T+
Sbjct: 501 FNGHTQPVTAVAIAPDG---HTMASADSEGLIHLWDIGTGRRIKTM 543
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 213 (80.0 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 56/220 (25%), Positives = 100/220 (45%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
HP M+++ + + VW++ET ++ + V+ F + + S DM + +
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+++ E + H V VA+ P ++++S D IK+W + + C + F GH
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY-----YH--- 195
+V + N +D AS S D+TV+VW + + L HE V C+ + Y
Sbjct: 236 WVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 196 ----------GGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
G P+L+SG+ D+ +K+WD C+ TL
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 197 (74.4 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 47/163 (28%), Positives = 84/163 (51%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV F P + +V+ S+D + V++Y T + + + H+D V+ ++ + L + S
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
DM IKLW+++ + C + GH H V + I P ++ SAS D+T+K+W++ +
Sbjct: 170 ADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCV 227
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
T GH + V V G + S ++D+ V++W K C
Sbjct: 228 KTFTGHREWVRMVRPNQDGT--LIASCSNDQTVRVWVVATKEC 268
Score = 186 (70.5 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 55/240 (22%), Positives = 110/240 (45%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
D +R L +D V+ + + + + + +W+ + + +++ D V +
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P + IV+ S D + ++ T +F H ++VR V + + + S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W---NWE-KA-------------WACQQVFEGHTHYV-MQIVINPKDNNTFASASLDRTV 167
W E KA WA + + + + + K S S D+T+
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
K+W + + TL GH+ V V +H G K +++S ADD+ +++WDY+NK C++TL +
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA 378
Score = 176 (67.0 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
++ H V V HP ++++S+D IK+W++E ++ +GHT V I +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
AS S D T+K+W T+ GH+ V+ V GD +++S + D+ +K
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217
Query: 213 IWDYQNKTCVQT 224
+W+ Q CV+T
Sbjct: 218 MWEVQTGYCVKT 229
Score = 144 (55.7 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 112 PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
PFLL+ S D IK+W+ C GH ++V ++ + S + D+T++VW
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 172 LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ TL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 213 (80.0 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 56/220 (25%), Positives = 100/220 (45%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
HP M+++ + + VW++ET ++ + V+ F + + S DM + +
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+++ E + H V VA+ P ++++S D IK+W + + C + F GH
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY-----YH--- 195
+V + N +D AS S D+TV+VW + + L HE V C+ + Y
Sbjct: 236 WVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 196 ----------GGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
G P+L+SG+ D+ +K+WD C+ TL
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 197 (74.4 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 47/163 (28%), Positives = 84/163 (51%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV F P + +V+ S+D + V++Y T + + + H+D V+ ++ + L + S
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
DM IKLW+++ + C + GH H V + I P ++ SAS D+T+K+W++ +
Sbjct: 170 ADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCV 227
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
T GH + V V G + S ++D+ V++W K C
Sbjct: 228 KTFTGHREWVRMVRPNQDGT--LIASCSNDQTVRVWVVATKEC 268
Score = 186 (70.5 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 55/240 (22%), Positives = 110/240 (45%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
D +R L +D V+ + + + + + +W+ + + +++ D V +
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P + IV+ S D + ++ T +F H ++VR V + + + S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W---NWE-KA-------------WACQQVFEGHTHYV-MQIVINPKDNNTFASASLDRTV 167
W E KA WA + + + + + K S S D+T+
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
K+W + + TL GH+ V V +H G K +++S ADD+ +++WDY+NK C++TL +
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA 378
Score = 176 (67.0 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
++ H V V HP ++++S+D IK+W++E ++ +GHT V I +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
AS S D T+K+W T+ GH+ V+ V GD +++S + D+ +K
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217
Query: 213 IWDYQNKTCVQT 224
+W+ Q CV+T
Sbjct: 218 MWEVQTGYCVKT 229
Score = 144 (55.7 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 112 PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
PFLL+ S D IK+W+ C GH ++V ++ + S + D+T++VW
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 172 LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ TL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 213 (80.0 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 56/220 (25%), Positives = 100/220 (45%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
HP M+++ + + VW++ET ++ + V+ F + + S DM + +
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+++ E + H V VA+ P ++++S D IK+W + + C + F GH
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY-----YH--- 195
+V + N +D AS S D+TV+VW + + L HE V C+ + Y
Sbjct: 236 WVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 196 ----------GGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
G P+L+SG+ D+ +K+WD C+ TL
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 197 (74.4 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 47/163 (28%), Positives = 84/163 (51%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV F P + +V+ S+D + V++Y T + + + H+D V+ ++ + L + S
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
DM IKLW+++ + C + GH H V + I P ++ SAS D+T+K+W++ +
Sbjct: 170 ADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCV 227
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
T GH + V V G + S ++D+ V++W K C
Sbjct: 228 KTFTGHREWVRMVRPNQDGT--LIASCSNDQTVRVWVVATKEC 268
Score = 186 (70.5 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 55/240 (22%), Positives = 110/240 (45%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
D +R L +D V+ + + + + + +W+ + + +++ D V +
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P + IV+ S D + ++ T +F H ++VR V + + + S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W---NWE-KA-------------WACQQVFEGHTHYV-MQIVINPKDNNTFASASLDRTV 167
W E KA WA + + + + + K S S D+T+
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
K+W + + TL GH+ V V +H G K +++S ADD+ +++WDY+NK C++TL +
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA 378
Score = 176 (67.0 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
++ H V V HP ++++S+D IK+W++E ++ +GHT V I +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
AS S D T+K+W T+ GH+ V+ V GD +++S + D+ +K
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217
Query: 213 IWDYQNKTCVQT 224
+W+ Q CV+T
Sbjct: 218 MWEVQTGYCVKT 229
Score = 144 (55.7 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 112 PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
PFLL+ S D IK+W+ C GH ++V ++ + S + D+T++VW
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 172 LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ TL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 213 (80.0 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 56/220 (25%), Positives = 100/220 (45%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
HP M+++ + + VW++ET ++ + V+ F + + S DM + +
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+++ E + H V VA+ P ++++S D IK+W + + C + F GH
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY-----YH--- 195
+V + N +D AS S D+TV+VW + + L HE V C+ + Y
Sbjct: 236 WVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 196 ----------GGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
G P+L+SG+ D+ +K+WD C+ TL
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 197 (74.4 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 47/163 (28%), Positives = 84/163 (51%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV F P + +V+ S+D + V++Y T + + + H+D V+ ++ + L + S
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
DM IKLW+++ + C + GH H V + I P ++ SAS D+T+K+W++ +
Sbjct: 170 ADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCV 227
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
T GH + V V G + S ++D+ V++W K C
Sbjct: 228 KTFTGHREWVRMVRPNQDGT--LIASCSNDQTVRVWVVATKEC 268
Score = 186 (70.5 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 55/240 (22%), Positives = 110/240 (45%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
D +R L +D V+ + + + + + +W+ + + +++ D V +
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P + IV+ S D + ++ T +F H ++VR V + + + S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W---NWE-KA-------------WACQQVFEGHTHYV-MQIVINPKDNNTFASASLDRTV 167
W E KA WA + + + + + K S S D+T+
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
K+W + + TL GH+ V V +H G K +++S ADD+ +++WDY+NK C++TL +
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA 378
Score = 176 (67.0 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
++ H V V HP ++++S+D IK+W++E ++ +GHT V I +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
AS S D T+K+W T+ GH+ V+ V GD +++S + D+ +K
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217
Query: 213 IWDYQNKTCVQT 224
+W+ Q CV+T
Sbjct: 218 MWEVQTGYCVKT 229
Score = 144 (55.7 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 112 PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
PFLL+ S D IK+W+ C GH ++V ++ + S + D+T++VW
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 172 LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ TL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 213 (80.0 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 56/220 (25%), Positives = 100/220 (45%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
HP M+++ + + VW++ET ++ + V+ F + + S DM + +
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+++ E + H V VA+ P ++++S D IK+W + + C + F GH
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY-----YH--- 195
+V + N +D AS S D+TV+VW + + L HE V C+ + Y
Sbjct: 236 WVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 196 ----------GGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
G P+L+SG+ D+ +K+WD C+ TL
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 197 (74.4 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 47/163 (28%), Positives = 84/163 (51%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV F P + +V+ S+D + V++Y T + + + H+D V+ ++ + L + S
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
DM IKLW+++ + C + GH H V + I P ++ SAS D+T+K+W++ +
Sbjct: 170 ADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCV 227
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
T GH + V V G + S ++D+ V++W K C
Sbjct: 228 KTFTGHREWVRMVRPNQDGT--LIASCSNDQTVRVWVVATKEC 268
Score = 186 (70.5 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 55/240 (22%), Positives = 110/240 (45%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
D +R L +D V+ + + + + + +W+ + + +++ D V +
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P + IV+ S D + ++ T +F H ++VR V + + + S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W---NWE-KA-------------WACQQVFEGHTHYV-MQIVINPKDNNTFASASLDRTV 167
W E KA WA + + + + + K S S D+T+
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
K+W + + TL GH+ V V +H G K +++S ADD+ +++WDY+NK C++TL +
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA 378
Score = 176 (67.0 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
++ H V V HP ++++S+D IK+W++E ++ +GHT V I +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
AS S D T+K+W T+ GH+ V+ V GD +++S + D+ +K
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217
Query: 213 IWDYQNKTCVQT 224
+W+ Q CV+T
Sbjct: 218 MWEVQTGYCVKT 229
Score = 144 (55.7 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 112 PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
PFLL+ S D IK+W+ C GH ++V ++ + S + D+T++VW
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 172 LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ TL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 213 (80.0 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 56/220 (25%), Positives = 100/220 (45%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
HP M+++ + + VW++ET ++ + V+ F + + S DM + +
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+++ E + H V VA+ P ++++S D IK+W + + C + F GH
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY-----YH--- 195
+V + N +D AS S D+TV+VW + + L HE V C+ + Y
Sbjct: 236 WVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 196 ----------GGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
G P+L+SG+ D+ +K+WD C+ TL
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 197 (74.4 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 47/163 (28%), Positives = 84/163 (51%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV F P + +V+ S+D + V++Y T + + + H+D V+ ++ + L + S
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
DM IKLW+++ + C + GH H V + I P ++ SAS D+T+K+W++ +
Sbjct: 170 ADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCV 227
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
T GH + V V G + S ++D+ V++W K C
Sbjct: 228 KTFTGHREWVRMVRPNQDGT--LIASCSNDQTVRVWVVATKEC 268
Score = 186 (70.5 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 55/240 (22%), Positives = 110/240 (45%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
D +R L +D V+ + + + + + +W+ + + +++ D V +
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P + IV+ S D + ++ T +F H ++VR V + + + S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W---NWE-KA-------------WACQQVFEGHTHYV-MQIVINPKDNNTFASASLDRTV 167
W E KA WA + + + + + K S S D+T+
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
K+W + + TL GH+ V V +H G K +++S ADD+ +++WDY+NK C++TL +
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA 378
Score = 176 (67.0 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
++ H V V HP ++++S+D IK+W++E ++ +GHT V I +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
AS S D T+K+W T+ GH+ V+ V GD +++S + D+ +K
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217
Query: 213 IWDYQNKTCVQT 224
+W+ Q CV+T
Sbjct: 218 MWEVQTGYCVKT 229
Score = 144 (55.7 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 112 PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
PFLL+ S D IK+W+ C GH ++V ++ + S + D+T++VW
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 172 LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ TL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 213 (80.0 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 56/220 (25%), Positives = 100/220 (45%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
HP M+++ + + VW++ET ++ + V+ F + + S DM + +
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+++ E + H V VA+ P ++++S D IK+W + + C + F GH
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY-----YH--- 195
+V + N +D AS S D+TV+VW + + L HE V C+ + Y
Sbjct: 236 WVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 196 ----------GGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
G P+L+SG+ D+ +K+WD C+ TL
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 197 (74.4 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 47/163 (28%), Positives = 84/163 (51%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV F P + +V+ S+D + V++Y T + + + H+D V+ ++ + L + S
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
DM IKLW+++ + C + GH H V + I P ++ SAS D+T+K+W++ +
Sbjct: 170 ADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCV 227
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
T GH + V V G + S ++D+ V++W K C
Sbjct: 228 KTFTGHREWVRMVRPNQDGT--LIASCSNDQTVRVWVVATKEC 268
Score = 186 (70.5 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 55/240 (22%), Positives = 110/240 (45%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
D +R L +D V+ + + + + + +W+ + + +++ D V +
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P + IV+ S D + ++ T +F H ++VR V + + + S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W---NWE-KA-------------WACQQVFEGHTHYV-MQIVINPKDNNTFASASLDRTV 167
W E KA WA + + + + + K S S D+T+
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
K+W + + TL GH+ V V +H G K +++S ADD+ +++WDY+NK C++TL +
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA 378
Score = 176 (67.0 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
++ H V V HP ++++S+D IK+W++E ++ +GHT V I +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
AS S D T+K+W T+ GH+ V+ V GD +++S + D+ +K
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217
Query: 213 IWDYQNKTCVQT 224
+W+ Q CV+T
Sbjct: 218 MWEVQTGYCVKT 229
Score = 144 (55.7 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 112 PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
PFLL+ S D IK+W+ C GH ++V ++ + S + D+T++VW
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 172 LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ TL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 213 (80.0 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 56/220 (25%), Positives = 100/220 (45%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
HP M+++ + + VW++ET ++ + V+ F + + S DM + +
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+++ E + H V VA+ P ++++S D IK+W + + C + F GH
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY-----YH--- 195
+V + N +D AS S D+TV+VW + + L HE V C+ + Y
Sbjct: 236 WVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 196 ----------GGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
G P+L+SG+ D+ +K+WD C+ TL
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 197 (74.4 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 47/163 (28%), Positives = 84/163 (51%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV F P + +V+ S+D + V++Y T + + + H+D V+ ++ + L + S
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
DM IKLW+++ + C + GH H V + I P ++ SAS D+T+K+W++ +
Sbjct: 170 ADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCV 227
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
T GH + V V G + S ++D+ V++W K C
Sbjct: 228 KTFTGHREWVRMVRPNQDGT--LIASCSNDQTVRVWVVATKEC 268
Score = 186 (70.5 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 55/240 (22%), Positives = 110/240 (45%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
D +R L +D V+ + + + + + +W+ + + +++ D V +
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P + IV+ S D + ++ T +F H ++VR V + + + S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W---NWE-KA-------------WACQQVFEGHTHYV-MQIVINPKDNNTFASASLDRTV 167
W E KA WA + + + + + K S S D+T+
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
K+W + + TL GH+ V V +H G K +++S ADD+ +++WDY+NK C++TL +
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA 378
Score = 176 (67.0 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
++ H V V HP ++++S+D IK+W++E ++ +GHT V I +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
AS S D T+K+W T+ GH+ V+ V GD +++S + D+ +K
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217
Query: 213 IWDYQNKTCVQT 224
+W+ Q CV+T
Sbjct: 218 MWEVQTGYCVKT 229
Score = 144 (55.7 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 112 PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
PFLL+ S D IK+W+ C GH ++V ++ + S + D+T++VW
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 172 LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ TL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 213 (80.0 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 56/220 (25%), Positives = 100/220 (45%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
HP M+++ + + VW++ET ++ + V+ F + + S DM + +
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKL 176
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+++ E + H V VA+ P ++++S D IK+W + + C + F GH
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY-----YH--- 195
+V + N +D AS S D+TV+VW + + L HE V C+ + Y
Sbjct: 236 WVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTIS 294
Query: 196 ----------GGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
G P+L+SG+ D+ +K+WD C+ TL
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTL 334
Score = 201 (75.8 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 48/163 (29%), Positives = 84/163 (51%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV F P + +V+ S+D + V++Y T + + + H+D V+ ++ T L + S
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCS 169
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
DM IKLW+++ + C + GH H V + I P ++ SAS D+T+K+W++ +
Sbjct: 170 ADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCV 227
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
T GH + V V G + S ++D+ V++W K C
Sbjct: 228 KTFTGHREWVRMVRPNQDGT--LIASCSNDQTVRVWVVATKEC 268
Score = 175 (66.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
++ H V V HP ++++S+D IK+W++E ++ +GHT V I +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
AS S D T+K+W T+ GH+ V+ V GD +++S + D+ +K
Sbjct: 160 HTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217
Query: 213 IWDYQNKTCVQT 224
+W+ Q CV+T
Sbjct: 218 MWEVQTGYCVKT 229
Score = 148 (57.2 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 51/239 (21%), Positives = 106/239 (44%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
D +R L +D V+ T + + + + +W+ + + +++ D V +
Sbjct: 141 DFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P + IV+ S D + ++ T +F H ++VR V + + + S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 WNWEKAWACQQVFEGHTHYVMQIVINPKDN-NTFASASLDRTVKVWQLG----SASPNFT 180
W C+ H H V I P+ + +T + A+ T K + G S S + T
Sbjct: 261 WVVATK-ECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKT 319
Query: 181 LEGHEKGVN-CVDYYHGGDK-----------PYLISGADDRLVKIWDYQNKTCVQTLES 227
++ + C+ G D +++S ADD+ +++WD++NK C++TL +
Sbjct: 320 IKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNA 378
Score = 145 (56.1 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 112 PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
PFLL+ S D IK+W+ C GH ++V ++ + S + D+T++VW
Sbjct: 309 PFLLSGSRDKTIKMWDISTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 172 LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ TL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 367 FKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 215 (80.7 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 48/176 (27%), Positives = 87/176 (49%)
Query: 60 VRAAKFVPR-KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
+ + F P + +VTG+ D +++ +T H+ + H ++V CV+ P + T S
Sbjct: 146 ILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGS 205
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQI------VINPKDNNTFASASLDRTVKVWQL 172
D I+LW+ + GH+ ++ + ++ P AS+S D T+K+W
Sbjct: 206 MDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDT 265
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK-TCVQTLES 227
S +T+ GH V+CV + G + L SG+ DR V++WD ++ C+ L+S
Sbjct: 266 VSRVCQYTMSGHTNSVSCVKW---GGQGLLYSGSHDRTVRVWDINSQGRCINILKS 318
Score = 156 (60.0 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 72 IVTGSDDMQVCVFN-YNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+VT SDD + ++N + + H V VA P +++++S D IKLW+
Sbjct: 374 MVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRD 433
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
F GH V Q+ + D S S D T+KVW + + + L GH+ V
Sbjct: 434 GKFIS-TFRGHVASVYQVAWS-SDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYT 491
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDY 216
VD+ G + + SG D++V++W +
Sbjct: 492 VDWSVDGKR--VCSGGKDKMVRLWTH 515
Score = 120 (47.3 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 31/110 (28%), Positives = 50/110 (45%)
Query: 110 TQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKV 169
++ ++T+SDD + LWN K+ GH V + +P D SAS D ++K+
Sbjct: 370 SEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSP-DGRYIVSASFDNSIKL 428
Query: 170 WQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK 219
W T GH V V + D L+S + D +K+WD + +
Sbjct: 429 WDGRDGKFISTFRGHVASVYQVAW--SSDCRLLVSCSKDTTLKVWDVRTR 476
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 208 (78.3 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 55/216 (25%), Positives = 93/216 (43%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
+ T D V C + P+ + + + V +W F VR+ F
Sbjct: 56 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+VT SDD V V++ + S H ++VRC P ++++SDD +KLW+ +
Sbjct: 116 QLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-K 174
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ C + H +V + +P A+A +D TVKVW + + H VN
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPS-GTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVN 233
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
+ ++ G+ YLI+ + D +KI D + TL
Sbjct: 234 ALSFHPSGN--YLITASSDSTLKILDLMEGRLLYTL 267
Score = 177 (67.4 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 46/155 (29%), Positives = 73/155 (47%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
VR AKF P IV+ SDD V +++ + E HS+ H +V V HP+ + +
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D +K+W+ + Q ++ H+ V + +P N +AS D T+K+ L +
Sbjct: 208 DNTVKVWD-TRTHRLVQHYQLHSAAVNALSFHPS-GNYLITASSDSTLKILDLMEGRLLY 265
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
TL GH+ V + G+ Y SG D V +W
Sbjct: 266 TLHGHQGPATTVAFSRTGE--YFASGGSDEQVMVW 298
Score = 168 (64.2 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 53/217 (24%), Positives = 88/217 (40%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++R D V C D + + + + +W+ + F V F
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P + + +GS D V ++ N F AH+ VR V L+T+SDD +K+W
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVW 130
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + + + H ++V +P D SAS D+TVK+W S + H
Sbjct: 131 STHRQRFLFSLTQ-HINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
V VD++ G + + D VK+WD + VQ
Sbjct: 189 FVTYVDFHPSGT--CIAAAGMDNTVKVWDTRTHRLVQ 223
Score = 112 (44.5 bits), Expect = 0.00040, P = 0.00040
Identities = 37/163 (22%), Positives = 68/163 (41%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLP--VRAAKFVPR 68
LT + V+C P ++++ + V +W+ + + V S+ C+ V F P
Sbjct: 141 LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSY--CEHGGFVTYVDFHPS 198
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW 128
I D V V++ T ++ HS V ++ HP+ +L+T+S D +K+ +
Sbjct: 199 GTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL 258
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
+ GH + + + FAS D V VW+
Sbjct: 259 MEG-RLLYTLHGHQGPATTVAFS-RTGEYFASGGSDEQVMVWK 299
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 209 (78.6 bits), Expect = 8.8e-17, P = 8.8e-17
Identities = 56/218 (25%), Positives = 97/218 (44%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + VW+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLER----FHSFEAHSDYVRCVAVHPTQPFLLTS 117
+ P N++ G D ++N T E AH+ Y+ C ++TS
Sbjct: 102 TCAYAPSGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNS-IVTS 160
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
S D LW+ E + VF GHT M + ++P D F S + D T K+W + +
Sbjct: 161 SGDTTCALWDIETGQQ-KTVFLGHTGDCMSLAVSP-DFKLFISGACDATAKLWDVREGTC 218
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ + +G+DD +++D
Sbjct: 219 RQTFSGHESDINAICFFPNGEA--ICTGSDDATCRLFD 254
Score = 136 (52.9 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 42/160 (26%), Positives = 70/160 (43%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ V++ T + H+ S +V A P+ F+ D + ++N +
Sbjct: 70 LVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V HT Y+ D+N+ ++S D T +W + + GH G
Sbjct: 130 EGNVKVSRELSAHTGYLS--CCRFLDDNSIVTSSGDTTCALWDIETGQQKTVFLGHT-G- 185
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
+C+ D ISGA D K+WD + TC QT SG
Sbjct: 186 DCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTF-SG 224
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 212 (79.7 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 56/220 (25%), Positives = 99/220 (45%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
HP M+++ + + VW++ET ++ + V F + + S DM + +
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKL 176
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+++ E + H V VA+ P ++++S D IK+W + + C + F GH
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHRE 235
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY-----YH--- 195
+V + N +D AS S D+TV+VW + + L HE V C+ + Y
Sbjct: 236 WVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 196 ----------GGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
G P+L+SG+ D+ +K+WD C+ TL
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 196 (74.1 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 47/163 (28%), Positives = 83/163 (50%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV F P + +V+ S+D + V++Y T + + + H+D V ++ + L + S
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCS 169
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
DM IKLW+++ + C + GH H V + I P ++ SAS D+T+K+W++ +
Sbjct: 170 ADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGYCV 227
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
T GH + V V G + S ++D+ V++W K C
Sbjct: 228 KTFTGHREWVRMVRPNQDGT--LIASCSNDQTVRVWVVATKEC 268
Score = 186 (70.5 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 55/240 (22%), Positives = 110/240 (45%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
D +R L +D V+ + + + + + +W+ + + +++ D V +
Sbjct: 141 DFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P + IV+ S D + ++ T +F H ++VR V + + + S+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W---NWE-KA-------------WACQQVFEGHTHYV-MQIVINPKDNNTFASASLDRTV 167
W E KA WA + + + + + K S S D+T+
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
K+W + + TL GH+ V V +H G K +++S ADD+ +++WDY+NK C++TL +
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA 378
Score = 174 (66.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
++ H V V HP ++++S+D IK+W++E ++ +GHT V I +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVEDISFD- 159
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
AS S D T+K+W T+ GH+ V+ V GD +++S + D+ +K
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217
Query: 213 IWDYQNKTCVQT 224
+W+ Q CV+T
Sbjct: 218 MWEVQTGYCVKT 229
Score = 144 (55.7 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 112 PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
PFLL+ S D IK+W+ C GH ++V ++ + S + D+T++VW
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWD 366
Query: 172 LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ TL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 212 (79.7 bits), Expect = 9.9e-17, P = 9.9e-17
Identities = 43/133 (32%), Positives = 73/133 (54%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
H H + + V HP+ ++++S+D IK+W++E ++ +GHT+ V I +
Sbjct: 100 HILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESG-EFERTLKGHTNAVQDIDFD- 157
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
K N AS S D T+K+W + TL GH+ V+CV + GD+ LIS + D+ +K
Sbjct: 158 KTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQ--LISSSRDKTIK 215
Query: 213 IWDYQNKTCVQTL 225
+W+ C++TL
Sbjct: 216 VWEAATGYCIKTL 228
Score = 181 (68.8 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 44/186 (23%), Positives = 86/186 (46%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
K LT + + HP+ M+++ + + VW+ E+ + ++ + V+ F
Sbjct: 99 KHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDK 158
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
N + + S D+ + ++++ T + + H V CV P+ L++SS D IK+W
Sbjct: 159 TGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWE 218
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
+ C + GH +V +I ++ +D + AS S D+T+K W + T H
Sbjct: 219 AATGY-CIKTLVGHEDWVRKITVS-EDGSCIASCSNDQTIKTWNIVKGECLATYREHSHV 276
Query: 188 VNCVDY 193
V C+ +
Sbjct: 277 VECLAF 282
Score = 140 (54.3 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 52/219 (23%), Positives = 91/219 (41%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
+ +R L ++ V+ D T + + + + +W+ +T VK+ D V +F
Sbjct: 139 EFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRF 198
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
P + +++ S D + V+ T + H D+VR + V + + S+D IK
Sbjct: 199 TPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKT 258
Query: 126 WNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
WN K C + H+H V + + N SL T + G + +G
Sbjct: 259 WNIVKG-ECLATYREHSHVVECLAFSTA-NIIDIPGSLLSTPE----GKSKVK---QG-- 307
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
G N V G YL +G+ D+ +KIW+ C+ T
Sbjct: 308 PGGNLV-----GQCGYLATGSRDKTIKIWELATGRCLAT 341
Score = 139 (54.0 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 29/102 (28%), Positives = 52/102 (50%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
++ TGS D + ++ T ++ H ++VR V HP FLL+ DD I++W+ +
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQ 377
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
+ + E HTH++ + N A+ +D +KVW+L
Sbjct: 378 GRCIKTINEAHTHFISCLDFC-LHNPHIATGGVDDVIKVWKL 418
Score = 136 (52.9 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 135 QQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYY 194
+ + GH + + + +P + SAS D T+KVW S TL+GH V +D+
Sbjct: 99 KHILTGHRNCINSVKFHPSFS-LMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFD 157
Query: 195 HGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
G+ L S + D +K+WD+Q CV+TL
Sbjct: 158 KTGN--LLASCSADLTIKLWDFQTYDCVKTL 186
Score = 125 (49.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
+L T S D IK+W C + GH ++V + +P S D+T++VW +
Sbjct: 318 YLATGSRDKTIKIWELATG-RCLATYIGHDNWVRAVRFHPC-GKFLLSVGDDKTIRVWDI 375
Query: 173 GSASPNFTL-EGHEKGVNCVDY-YHGGDKPYLISGADDRLVKIWDYQ 217
T+ E H ++C+D+ H P++ +G D ++K+W Q
Sbjct: 376 AQGRCIKTINEAHTHFISCLDFCLHN---PHIATGGVDDVIKVWKLQ 419
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
A+ S D+T+K+W+L + T GH+ V V ++ G +L+S DD+ +++WD
Sbjct: 320 ATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGK--FLLSVGDDKTIRVWDIAQ 377
Query: 219 KTCVQTL 225
C++T+
Sbjct: 378 GRCIKTI 384
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 217 (81.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 55/219 (25%), Positives = 100/219 (45%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
+ L S V P ++L+ + V +W+ +T+ + S++ + PV F P
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW 128
++ T S D +++ + + F H + V CV+ HP ++ T S D ++W+
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV 638
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG- 187
+ + +F GHT V+ I + P D ++ S D + VW +G+ + GH K
Sbjct: 639 STGDSVR-LFLGHTAPVISIAVCP-DGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNA 696
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ + Y G+ LISG D V++WD + T + E
Sbjct: 697 IYSLSYSKEGN--VLISGGADHTVRVWDLKKATTEPSAE 733
Score = 127 (49.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 35/126 (27%), Positives = 57/126 (45%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
V F P ++ TGS D +++ +T + F H+ V +AV P +L T S+
Sbjct: 612 VDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSE 671
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D +I +W+ +Q+ GH + + K+ N S D TV+VW L A+
Sbjct: 672 DGIINVWDIGTGKRLKQM-RGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEP 730
Query: 180 TLEGHE 185
+ E E
Sbjct: 731 SAEPDE 736
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 209 (78.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 62/227 (27%), Positives = 97/227 (42%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L +V C D + +++S +G V VW+ T + + V A F P
Sbjct: 61 RRILKGHVGKVLCMDWSLDKRHIVSSSQDGKVIVWDGFTTNKEHALTMPTTWVMACAFSP 120
Query: 68 RKNWIVTGSDDMQVCV----FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI 123
I G D + V F + +++ H+ Y+ C + +LT S D
Sbjct: 121 SSQMIACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTC 180
Query: 124 KLWNWEKAWACQQVFEGHTHYVMQIVINPKDN-NTFASASLDRTVKVWQLGSASPNFTLE 182
+W+ E Q F GHT V I + D NTF SA D+ VW + S + E
Sbjct: 181 AIWDVESGQLIQN-FHGHTGDVFAIDVPKCDTGNTFISAGADKHSLVWDIRSGQCVQSFE 239
Query: 183 GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ--NKTCVQTLES 227
GHE +N V ++ GD +G+DD +++D + + CV ES
Sbjct: 240 GHEADINTVRFHPNGDA--FATGSDDATCRLFDLRADRQVCVYEKES 284
Score = 122 (48.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 47/211 (22%), Positives = 83/211 (39%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
KR++ + + CC ++ +L + +W+ E+ Q +++F V A VP
Sbjct: 149 KRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFHGHTGDVFAID-VP 207
Query: 68 R---KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIK 124
+ N ++ D V++ + + SFE H + V HP T SDD +
Sbjct: 208 KCDTGNTFISAGADKHSLVWDIRSGQCVQSFEGHEADINTVRFHPNGDAFATGSDDATCR 267
Query: 125 LWNWEK-AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
L++ C E V + + FA D V VW + + L G
Sbjct: 268 LFDLRADRQVCVYEKESILFPVNGVDFSLSGRILFAGYG-DYRVGVWDSLKCARHSVLYG 326
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
HE ++C+ G + S + D ++IW
Sbjct: 327 HENRISCLRTSPDGTA--VCSASWDCTIRIW 355
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 215 (80.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 60/205 (29%), Positives = 91/205 (44%)
Query: 26 TEPWMLASLYNGHVHV-WNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVF 84
T PW V W H + V D V + V +N + +GS D + ++
Sbjct: 242 TRPWKEVYAERCRVECNWRHGRCRQVVLSGHSD-GVMCLQLV--RNILASGSYDATIRLW 298
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
N T ++ E HS V C+ + L++ S D I++WN+ + C + GHT
Sbjct: 299 NLATFQQVALLEGHSSGVTCLQFDQCK--LISGSMDKTIRIWNYRTS-ECISILHGHTDS 355
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLIS 204
V+ + D+ S S D TVK+W S TL GH VN V D+ ++S
Sbjct: 356 VLCLTF---DSTLLVSGSADCTVKLWHF-SGGKRITLRGHTGPVNSVRIIR--DRGLVLS 409
Query: 205 GADDRLVKIWDYQNKTCVQTLESGI 229
G+DD +KIW + TC+ T + I
Sbjct: 410 GSDDSTIKIWSLETNTCLHTFSAHI 434
Score = 194 (73.4 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 65/216 (30%), Positives = 96/216 (44%)
Query: 11 LTARSDRVKCCDLHPTEPWMLAS-LYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
L+ SD V C L +LAS Y+ + +WN T Q V E V +F K
Sbjct: 269 LSGHSDGVMCLQLVRN---ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCK 325
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+++GS D + ++NY T E H+D V C+ T L++ S D +KLW++
Sbjct: 326 --LISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDST--LLVSGSADCTVKLWHF- 380
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ + GHT V + I +D S S D T+K+W L + + T H +
Sbjct: 381 -SGGKRITLRGHTGPVNSVRII-RDRGLVLSGSDDSTIKIWSLETNTCLHTFSAH---IG 435
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
V D L S + D +K WD + K CV TL
Sbjct: 436 PVQSLALADSR-LFSCSLDGTIKQWDIEKKKCVHTL 470
Score = 152 (58.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 52/208 (25%), Positives = 95/208 (45%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L +D V C T +++ + V +W+ + + + PV + + + +
Sbjct: 349 LHGHTDSVLCLTFDST--LLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDRG 405
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+++GSDD + +++ T H+F AH V+ +A+ ++ L + S D IK W+ EK
Sbjct: 406 LVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSR--LFSCSLDGTIKQWDIEK 463
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
C GH V +I D+ S + D VKVW+ + TL+ H + V
Sbjct: 464 K-KCVHTLFGHIEGVWEIAA---DHLRLISGAHDGVVKVWE--ACECVHTLKNHSEPVTS 517
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDYQN 218
V GD ++SG++D + +W + N
Sbjct: 518 VAL---GDCE-VVSGSEDGKIYLWLFNN 541
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 212 (79.7 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 47/137 (34%), Positives = 70/137 (51%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
H+ +H D V CVA HP L + S+D IK+W+WE ++ +GH V +
Sbjct: 108 HTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELG-EIERTLKGHIRGVSGLDYGG 166
Query: 153 KDNNTF-ASASLDRTVKVWQLGSASPNF-TLEGHEKGVNCVDYYHGGDKPYLISGADDRL 210
+ NT AS S D T+K+W N TL GH+ V+ V + D +LIS + D
Sbjct: 167 QKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDN-HLISASRDGT 225
Query: 211 VKIWDYQNKTCVQTLES 227
++IWD CV+ ++S
Sbjct: 226 LRIWDVSTGFCVKVIKS 242
Score = 128 (50.1 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 37/159 (23%), Positives = 68/159 (42%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAV--HPTQPFLLTS 117
V F P + +GS+D + ++++ E + + H V + L +
Sbjct: 117 VTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASC 176
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-S 176
S D+ IKLW+ K +A + GH H V + ++N SAS D T+++W + +
Sbjct: 177 SSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFC 236
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
E + D D +L+SG D+ + +W+
Sbjct: 237 VKVIKSATESWIR--DVSPSFDGKWLVSGGRDQAITVWE 273
Score = 122 (48.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 38/184 (20%), Positives = 78/184 (42%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK- 69
LT+ D V C HP + + + + +W+ E + ++ + V + +K
Sbjct: 110 LTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKG 169
Query: 70 NWIVTG-SDDMQVCVFNYNT-LERFHSFEAHSDYVRCVA-VHPTQPFLLTSSDDMLIKLW 126
N ++ S D+ + +++ + + H V V + L+++S D +++W
Sbjct: 170 NTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIW 229
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + C +V + T ++ V D S D+ + VW++ SA P L GHE
Sbjct: 230 DVSTGF-CVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHEN 288
Query: 187 GVNC 190
+ C
Sbjct: 289 FIEC 292
Score = 97 (39.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDY-Q 217
A+ + D+T+K+W+ TL GH+ V + ++ GG YL S +DD+ ++ WD Q
Sbjct: 324 ATGARDKTIKLWEARGRLIK-TLHGHDNWVRGLVFHPGGK--YLFSVSDDKTIRCWDLSQ 380
Query: 218 NKTCVQTLESG 228
V+T+ SG
Sbjct: 381 EGRLVKTI-SG 390
Score = 96 (38.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
F+ T + D IKLW E + GH ++V +V +P F S S D+T++ W L
Sbjct: 322 FVATGARDKTIKLW--EARGRLIKTLHGHDNWVRGLVFHPGGKYLF-SVSDDKTIRCWDL 378
Query: 173 GSASPNF-TLEG-HEKGVNCV 191
T+ G HE V+C+
Sbjct: 379 SQEGRLVKTISGAHEHFVSCI 399
Score = 62 (26.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/81 (18%), Positives = 36/81 (44%)
Query: 30 MLASLYNGHVHVWNHETNQNVKSFE-VCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
++++ +G + +W+ T VK + + +R W+V+G D + V+ ++
Sbjct: 217 LISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSS 276
Query: 89 LERFHSFEAHSDYVRCVAVHP 109
E + H +++ C P
Sbjct: 277 AEPKAALLGHENFIECCVFAP 297
Score = 46 (21.3 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 7/25 (28%), Positives = 18/25 (72%)
Query: 201 YLISGADDRLVKIWDYQNKTCVQTL 225
++ +GA D+ +K+W+ + + ++TL
Sbjct: 322 FVATGARDKTIKLWEARGRL-IKTL 345
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 212 (79.7 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 47/137 (34%), Positives = 70/137 (51%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
H+ +H D V CVA HP L + S+D IK+W+WE ++ +GH V +
Sbjct: 108 HTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELG-EIERTLKGHIRGVSGLDYGG 166
Query: 153 KDNNTF-ASASLDRTVKVWQLGSASPNF-TLEGHEKGVNCVDYYHGGDKPYLISGADDRL 210
+ NT AS S D T+K+W N TL GH+ V+ V + D +LIS + D
Sbjct: 167 QKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDN-HLISASRDGT 225
Query: 211 VKIWDYQNKTCVQTLES 227
++IWD CV+ ++S
Sbjct: 226 LRIWDVSTGFCVKVIKS 242
Score = 128 (50.1 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 37/159 (23%), Positives = 68/159 (42%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAV--HPTQPFLLTS 117
V F P + +GS+D + ++++ E + + H V + L +
Sbjct: 117 VTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASC 176
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-S 176
S D+ IKLW+ K +A + GH H V + ++N SAS D T+++W + +
Sbjct: 177 SSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFC 236
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
E + D D +L+SG D+ + +W+
Sbjct: 237 VKVIKSATESWIR--DVSPSFDGKWLVSGGRDQAITVWE 273
Score = 122 (48.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 38/184 (20%), Positives = 78/184 (42%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK- 69
LT+ D V C HP + + + + +W+ E + ++ + V + +K
Sbjct: 110 LTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKG 169
Query: 70 NWIVTG-SDDMQVCVFNYNT-LERFHSFEAHSDYVRCVA-VHPTQPFLLTSSDDMLIKLW 126
N ++ S D+ + +++ + + H V V + L+++S D +++W
Sbjct: 170 NTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIW 229
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + C +V + T ++ V D S D+ + VW++ SA P L GHE
Sbjct: 230 DVSTGF-CVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHEN 288
Query: 187 GVNC 190
+ C
Sbjct: 289 FIEC 292
Score = 97 (39.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDY-Q 217
A+ + D+T+K+W+ TL GH+ V + ++ GG YL S +DD+ ++ WD Q
Sbjct: 324 ATGARDKTIKLWEARGRLIK-TLHGHDNWVRGLVFHPGGK--YLFSVSDDKTIRCWDLSQ 380
Query: 218 NKTCVQTLESG 228
V+T+ SG
Sbjct: 381 EGRLVKTI-SG 390
Score = 96 (38.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
F+ T + D IKLW E + GH ++V +V +P F S S D+T++ W L
Sbjct: 322 FVATGARDKTIKLW--EARGRLIKTLHGHDNWVRGLVFHPGGKYLF-SVSDDKTIRCWDL 378
Query: 173 GSASPNF-TLEG-HEKGVNCV 191
T+ G HE V+C+
Sbjct: 379 SQEGRLVKTISGAHEHFVSCI 399
Score = 62 (26.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/81 (18%), Positives = 36/81 (44%)
Query: 30 MLASLYNGHVHVWNHETNQNVKSFE-VCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
++++ +G + +W+ T VK + + +R W+V+G D + V+ ++
Sbjct: 217 LISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSS 276
Query: 89 LERFHSFEAHSDYVRCVAVHP 109
E + H +++ C P
Sbjct: 277 AEPKAALLGHENFIECCVFAP 297
Score = 46 (21.3 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 7/25 (28%), Positives = 18/25 (72%)
Query: 201 YLISGADDRLVKIWDYQNKTCVQTL 225
++ +GA D+ +K+W+ + + ++TL
Sbjct: 322 FVATGARDKTIKLWEARGRL-IKTL 345
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 215 (80.7 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 60/219 (27%), Positives = 104/219 (47%)
Query: 8 KRKL-TARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
K KL + D D+ P +P + + N ++++ N N+ F + +LPV
Sbjct: 314 KSKLKNEKKDSEFPVDMQP-DPNVTSCTENVSAAKFDYKLN-NI--FRLHELPVSCIVMH 369
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P ++++++ S+D + + H+D++ HP+ L TSS D IKLW
Sbjct: 370 PCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLW 429
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ K C EGH H V + + ASASLD T K+W + S +TL GH
Sbjct: 430 DLNKG-ECTLTLEGHNHAVWSCTWH-SCGDFVASASLDMTSKIWDVNSERCRYTLYGHTD 487
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
VN ++++ + L++ + D+ + +WD + C Q+L
Sbjct: 488 SVNSIEFFPFSN--ILLTASADKTLSVWDARTGKCEQSL 524
Score = 156 (60.0 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 44/165 (26%), Positives = 76/165 (46%)
Query: 65 FVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIK 124
F P + + T S D + +++ N E + E H+ V H F+ ++S DM K
Sbjct: 410 FHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSK 469
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+W+ C+ GHT V I P +N +AS D+T+ VW + +L GH
Sbjct: 470 IWDVNSE-RCRYTLYGHTDSVNSIEFFPF-SNILLTASADKTLSVWDARTGKCEQSLYGH 527
Query: 185 EKGVNCVDYYHGGDKPYLISGADDR-LVKIWDYQNKTCVQTLESG 228
VN + G ++I+ D R + K+WD++ + +++ G
Sbjct: 528 MHSVNDATFTPRG---HIIASCDARGVTKLWDFRKLIPIVSIDVG 569
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 51/221 (23%), Positives = 101/221 (45%)
Query: 4 RLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAA 63
RL+++ L V D+ T P +S + H+ +W+ E + +KS + +
Sbjct: 53 RLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTL 112
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI 123
F P + TG+ +V +F + ++ +S + ++ +A P +L + + D +I
Sbjct: 113 AFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGII 172
Query: 124 KLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+++ EGH + + +P D+ +AS D +K++ + A+ TL G
Sbjct: 173 NIFDIATG-KLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
H V V + D + +S + D+ VK+WD +TC+ T
Sbjct: 231 HASWVLNVAFCP--DDTHFVSSSSDKSVKVWDVGTRTCIHT 269
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 53/209 (25%), Positives = 101/209 (48%)
Query: 17 RVKCCDLHPTEPWMLA----------SLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++K D P + W LA + G V+++ E+ + S + + + +
Sbjct: 98 QMKSIDAGPVDAWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYS 157
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P ++ +G+ D + +F+ T + H+ E H+ +R + P L+T+SDD IK++
Sbjct: 158 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + A GH +V+ + P D + F S+S D++VKVW +G+ + T H+
Sbjct: 218 DVQHA-NLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVKVWDVGTRTCIHTFFDHQD 275
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
V V Y G K ++S DD+ + ++D
Sbjct: 276 QVWGVKYNGNGSK--IVSVGDDQEIHVYD 302
Score = 123 (48.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 44/157 (28%), Positives = 71/157 (45%)
Query: 72 IVTGS-DDM-QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+VTGS DD+ +V + LE S E H V V + T P +SS D I+LW+ E
Sbjct: 35 VVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE 94
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ + G + +P D+ A+ + V ++ + S ++L+ K +
Sbjct: 95 NGKQMKSIDAGPVD-AWTLAFSP-DSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFIL 152
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ Y D YL SGA D ++ I+D + TLE
Sbjct: 153 SIAY--SPDGKYLASGAIDGIINIFDIATGKLLHTLE 187
Score = 109 (43.4 bits), Expect = 0.00079, P = 0.00079
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 151 NPKDN-NTFASASLDRTVKVWQLGSA--SPNFTLEGHEKGVNCVDYYHGGDKPYLISGAD 207
N K+N T + SLD VKVW+ ++LEGH+ GV VD H P S +
Sbjct: 27 NKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISH--TLPIAASSSL 84
Query: 208 DRLVKIWDYQNKTCVQTLESG 228
D +++WD +N ++++++G
Sbjct: 85 DAHIRLWDLENGKQMKSIDAG 105
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 210 (79.0 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 55/220 (25%), Positives = 100/220 (45%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
HP M+++ + + VW++ET ++ + V+ F + + S DM + +
Sbjct: 117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+++ E + H V VA+ P +++++ D IK+W + + C + F GH
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGY-CVKTFTGHRE 235
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY-----YH--- 195
+V + N +D AS S D+TV+VW + + L HE V C+ + Y
Sbjct: 236 WVRMVRPN-QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSIS 294
Query: 196 ----------GGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
G P+L+SG+ D+ +K+WD C+ TL
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 194 (73.4 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 46/163 (28%), Positives = 84/163 (51%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV F P + +V+ S+D + V++Y T + + + H+D V+ ++ + L + S
Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 169
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
DM IKLW+++ + C + GH H V + I P ++ SA+ D+T+K+W++ +
Sbjct: 170 ADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSAARDKTIKMWEVQTGYCV 227
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
T GH + V V G + S ++D+ V++W K C
Sbjct: 228 KTFTGHREWVRMVRPNQDGT--LIASCSNDQTVRVWVVATKEC 268
Score = 183 (69.5 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 54/240 (22%), Positives = 110/240 (45%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
D +R L +D V+ + + + + + +W+ + + +++ D V +
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P + IV+ + D + ++ T +F H ++VR V + + + S+D +++
Sbjct: 201 MPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260
Query: 126 W---NWE-KA-------------WACQQVFEGHTHYV-MQIVINPKDNNTFASASLDRTV 167
W E KA WA + + + + + K S S D+T+
Sbjct: 261 WVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320
Query: 168 KVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
K+W + + TL GH+ V V +H G K +++S ADD+ +++WDY+NK C++TL +
Sbjct: 321 KMWDVSTGMCLMTLVGHDNWVRGV-LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA 378
Score = 179 (68.1 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 39/132 (29%), Positives = 66/132 (50%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
++ H V V HP ++++S+D IK+W++E ++ +GHT V I +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFD- 159
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
AS S D T+K+W T+ GH+ V+ V GD +++S A D+ +K
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSAARDKTIK 217
Query: 213 IWDYQNKTCVQT 224
+W+ Q CV+T
Sbjct: 218 MWEVQTGYCVKT 229
Score = 145 (56.1 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 52/227 (22%), Positives = 92/227 (40%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
R + V + P ++++ + + +W +T VK+F VR +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQ----------------- 111
I + S+D V V+ T E H V C++ P
Sbjct: 246 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSG 305
Query: 112 ---PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVK 168
PFLL+ S D IK+W+ C GH ++V ++ + S + D+T++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFH-SGGKFILSCADDKTLR 363
Query: 169 VWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
VW + TL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 364 VWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 210 (79.0 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 56/220 (25%), Positives = 100/220 (45%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
HP ++++ + + VW+HET ++ + V+ F + + S DM + +
Sbjct: 117 HPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKL 176
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+++ E + H V VA+ P ++++S D IK+W + C + F GH
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGY-CVKTFTGHRE 235
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYY----H---- 195
+V + N +D AS+S D+TV+VW + + L HE V C+ + H
Sbjct: 236 WVRMVRPN-QDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTIL 294
Query: 196 ----------GGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
G P+L+SG+ D+ +K+WD C+ TL
Sbjct: 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTL 334
Score = 204 (76.9 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 48/163 (29%), Positives = 84/163 (51%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV F P + IV+ S+D + V+++ T + + + H+D V+ ++ T L + S
Sbjct: 110 PVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCS 169
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
DM IKLW+++ + C + GH H V + I P ++ SAS D+T+K+W++ +
Sbjct: 170 ADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVATGYCV 227
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
T GH + V V G + S ++D+ V++W K C
Sbjct: 228 KTFTGHREWVRMVRPNQDGT--LIASSSNDQTVRVWVVATKEC 268
Score = 165 (63.1 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 37/132 (28%), Positives = 64/132 (48%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
++ H V V HP ++++S+D IK+W+ E ++ +GHT V I +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETG-DFERTLKGHTDSVQDISFD- 159
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
AS S D T+K+W T+ GH+ V+ V GD +++S + D+ +K
Sbjct: 160 HTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTIK 217
Query: 213 IWDYQNKTCVQT 224
+W+ CV+T
Sbjct: 218 MWEVATGYCVKT 229
Score = 165 (63.1 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 54/227 (23%), Positives = 95/227 (41%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
R + V + P ++++ + + +W T VK+F VR +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQD 245
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVA-----VHPT------------- 110
I + S+D V V+ T E H V C++ HPT
Sbjct: 246 GTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSG 305
Query: 111 --QPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVK 168
PFLL+ S D IK+W+ C GH ++V ++++P S + D+T++
Sbjct: 306 KPGPFLLSGSRDKTIKMWD-VSIGMCLMTLVGHDNWVRGVLVHP-GGKYIVSCADDKTLR 363
Query: 169 VWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+W + TL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 364 IWDYKNKRCTKTLSAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWE 408
Score = 160 (61.4 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 56/239 (23%), Positives = 106/239 (44%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
D +R L +D V+ T + + + + +W+ + + +++ D V +
Sbjct: 141 DFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P + IV+ S D + ++ T +F H ++VR V + + +SS+D +++
Sbjct: 201 MPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRV 260
Query: 126 WNWEKAWACQQVFEGHTHYVMQIVINPKDNN-TFASASLDRTVKVWQLG----SASPNFT 180
W C+ H H V I P+ + T A+ T K + G S S + T
Sbjct: 261 WVVATK-ECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKT 319
Query: 181 LEGHEKGVN-CVDYYHGGDK--------P---YLISGADDRLVKIWDYQNKTCVQTLES 227
++ + + C+ G D P Y++S ADD+ ++IWDY+NK C +TL +
Sbjct: 320 IKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSA 378
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 207 (77.9 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 55/225 (24%), Positives = 98/225 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWN-HETNQNVKSFEVCDLPVRAAKFVPRK 69
L+ V CC HP + +S Y+ + +WN + +N + + V +
Sbjct: 52 LSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDG 111
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVR-CVAVHPTQPFLLTSSDDMLIKLWNW 128
+ + + S D VCV++ T ER + H+ +V C T SDD +KLW+
Sbjct: 112 SLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDI 171
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
K A F+ +T+ V+ + N + S +D +KVW L ++++GH V
Sbjct: 172 RKK-ASVHTFQ-NTYQVLSVTFNDTSDQII-SGGIDNDIKVWDLRQNKLIYSMQGHGDSV 228
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQ----NKTCVQTLESGI 229
+ D YL+S + D V++WD + + CV+ + +
Sbjct: 229 TGLSL--SADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNV 271
Score = 159 (61.0 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 43/188 (22%), Positives = 92/188 (48%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G V +W+ +V +F+ V + F + I++G D + V++ + +S
Sbjct: 163 DGTVKLWDIRKKASVHTFQNT-YQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSM 221
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN---WEKAWACQQVFEGHTHYVMQIVIN- 151
+ H D V +++ +LL++S D +++W+ + C ++F+G+ H + ++
Sbjct: 222 QGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRC 281
Query: 152 --PKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDR 209
D + A+ S DR V +W + + L GH VN V ++ ++P ++SG+ D+
Sbjct: 282 SWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHP--EEPIVLSGSSDK 339
Query: 210 LVKIWDYQ 217
+ I + Q
Sbjct: 340 RLYIGEIQ 347
Score = 126 (49.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 49/195 (25%), Positives = 84/195 (43%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN--WIVTGSDDMQVCVFNYNTLERFHSFE 96
V VW+ ET + VK + V + F R+ TGSDD V +++ H+F+
Sbjct: 123 VCVWDSETGERVKRLKGHTSFVNSC-FPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ 181
Query: 97 AHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNN 156
++ V V + T +++ D IK+W+ + + +GH V + ++ D +
Sbjct: 182 -NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSM-QGHGDSVTGLSLSA-DGS 238
Query: 157 TFASASLDRTVKVWQLGSASPN------FTLEGHEKGVNCVDYYHGGDKPYLISGADDRL 210
S S+D +V+VW + +P F H N + D + +G+ DR
Sbjct: 239 YLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRF 298
Query: 211 VKIWDYQNKTCVQTL 225
V IWD + V L
Sbjct: 299 VYIWDTTTRRIVYKL 313
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 208 (78.3 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 65/229 (28%), Positives = 103/229 (44%)
Query: 2 PLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEV-CDLPV 60
P L R L S +V D P + W++++ +G + VWN T+Q + ++ C +
Sbjct: 53 PTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVM 112
Query: 61 RAAKFVPRKNWIVTGSDDMQVCVFNYNT-LERFHSFEA------HSDYVR-CVAVHPTQP 112
A F P + G D +FN N+ +R + H YV C V +
Sbjct: 113 TCA-FAPNGQSVACGGLDSACSIFNLNSQADRDGNIPVSRILTGHKGYVSSCQYVPDQET 171
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVF-----EGHTHYVMQIVINPKDNNTFASASLDRTV 167
L+TSS D LW+ +F GHT V+ + IN ++N F S S D TV
Sbjct: 172 RLITSSGDQTCVLWDVTTGQRIS-IFGGEFPSGHTADVLSLSINSSNSNMFVSGSCDATV 230
Query: 168 KVWQLGSASPNF-TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
++W + AS T GHE +N V ++ G + +G+DD +++D
Sbjct: 231 RLWDIRIASRAVRTYHGHEGDINSVKFFPDGQR--FGTGSDDGTCRLFD 277
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 56/209 (26%), Positives = 102/209 (48%)
Query: 17 RVKCCDLHPTEPWMLA----SLYN------GHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++K D P + W LA S Y G V+++ E+ + S + + + +
Sbjct: 80 QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYS 139
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P ++ +G+ D + +F+ T + H+ E H+ +R + P L+T+SDD IK++
Sbjct: 140 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 199
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + A GH +V+ + P D + F S+S D++VKVW +G+ + T H+
Sbjct: 200 DVQHA-NLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVKVWDVGTRTCVHTFFDHQD 257
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
V V Y G K ++S DD+ + I+D
Sbjct: 258 QVWGVKYNGNGSK--IVSVGDDQEIHIYD 284
Score = 185 (70.2 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 44/186 (23%), Positives = 87/186 (46%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
V +W+ E + +KS + + F P ++ TG+ +V +F + ++ +S +
Sbjct: 70 VRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTR 129
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
++ +A P +L + + D +I +++ EGH + + +P D+
Sbjct: 130 GKFILSIAYSPDGKYLASGAIDGIINIFDIATG-KLLHTLEGHAMPIRSLTFSP-DSQLL 187
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
+AS D +K++ + A+ TL GH V V + D + +S + D+ VK+WD
Sbjct: 188 VTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP--DDTHFVSSSSDKSVKVWDVGT 245
Query: 219 KTCVQT 224
+TCV T
Sbjct: 246 RTCVHT 251
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 208 (78.3 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 54/216 (25%), Positives = 95/216 (43%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
+ D V C + P+ + + + V +W F VR+ F
Sbjct: 56 RFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+VT SDD V V++ + + S H ++VRC P ++++SDD +KLW+ +
Sbjct: 116 QSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD-K 174
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ C + H +V + +P A+AS+D TVKVW + + + H VN
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPS-GTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVN 233
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
+ ++ G+ YL++ + D +KI D + TL
Sbjct: 234 ALSFHPSGN--YLLTASSDSTLKILDLMEGRLLYTL 267
Score = 178 (67.7 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 50/176 (28%), Positives = 81/176 (46%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
V VW+ + + S VR A+F P IV+ SDD V +++ + E HS+ H
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
+V V HP+ + +S D +K+W+ + Q ++ H+ V + +P N
Sbjct: 187 GGFVTYVDFHPSGTCIAAASMDNTVKVWD-VRTHRLLQHYQLHSAAVNALSFHPS-GNYL 244
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
+AS D T+K+ L +TL GH+ V + G+ Y SG D V +W
Sbjct: 245 LTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGE--YFASGGSDEQVMVW 298
Score = 153 (58.9 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 51/217 (23%), Positives = 88/217 (40%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++R D + D + + + + VW+ + F V F
Sbjct: 11 LERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFS 70
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P + + +GS D V ++ N F AH+ VR V L+T+SDD +K+W
Sbjct: 71 PSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + + + H ++V +P D SAS D+TVK+W S + H
Sbjct: 131 STHRQKFLFSLSQ-HINWVRCARFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
V VD++ G + + + D VK+WD + +Q
Sbjct: 189 FVTYVDFHPSGT--CIAAASMDNTVKVWDVRTHRLLQ 223
Score = 120 (47.3 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 36/142 (25%), Positives = 61/142 (42%)
Query: 88 TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQ 147
+LER H F+ H D + V L + S D + +W+ + + F GH V
Sbjct: 10 SLER-H-FKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYR-FAGHKDAVTC 66
Query: 148 IVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGAD 207
+ +P + AS S D+TV++W + H V V + G L++ +D
Sbjct: 67 VNFSPS-GHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQS--LVTASD 123
Query: 208 DRLVKIWDYQNKTCVQTLESGI 229
D+ VK+W + + +L I
Sbjct: 124 DKTVKVWSTHRQKFLFSLSQHI 145
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 37/156 (23%), Positives = 66/156 (42%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLP--VRAAKFVPRKNWIVTG 75
V+C P ++++ + V +W+ + + V S+ C+ V F P I
Sbjct: 148 VRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSY--CEHGGFVTYVDFHPSGTCIAAA 205
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQ 135
S D V V++ T ++ HS V ++ HP+ +LLT+S D +K+ + +
Sbjct: 206 SMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEG-RLL 264
Query: 136 QVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
GH + + + FAS D V VW+
Sbjct: 265 YTLHGHQGPATTVAFS-RTGEYFASGGSDEQVMVWK 299
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 205 (77.2 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 55/218 (25%), Positives = 98/218 (44%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + VW+ T V + + V
Sbjct: 42 RVQMRTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLER----FHSFEAHSDYVRCVAVHPTQPFLLTS 117
+ P N++ G D ++N + E AH+ Y+ C ++TS
Sbjct: 102 TCAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNN-IVTS 160
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
S D LW+ E + VF GHT M + ++P D N F S + D + K+W + +
Sbjct: 161 SGDTTCALWDIETGQQ-KTVFVGHTGDCMSLAVSP-DFNLFISGACDASAKLWDVREGTC 218
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ + +G+DD +++D
Sbjct: 219 RQTFTGHESDINAICFFPNGEA--ICTGSDDASCRLFD 254
Score = 134 (52.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 40/156 (25%), Positives = 67/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ V++ T + H+ S +V A P+ F+ D + ++N +
Sbjct: 70 LVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V HT Y+ D+N ++S D T +W + + GH G
Sbjct: 130 EGNVKVSRELSAHTGYLS--CCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHT-G- 185
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+C+ D ISGA D K+WD + TC QT
Sbjct: 186 DCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQT 221
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 209 (78.6 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 57/221 (25%), Positives = 101/221 (45%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+K LT V+ + P P++ + + V W+ E N+ ++ + V+A
Sbjct: 218 LKLSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVH 277
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P + +VT + D V++ T + H F H++ V V P ++T+S D ++LW
Sbjct: 278 PSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLW 337
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ A H V + I+P+ N FASAS D +K W+L L GH
Sbjct: 338 DLA-AGRSMCTLTHHKKSVRALTIHPR-LNMFASASPDN-IKQWKLPKGEFMQNLSGHNA 394
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
+N + D ++SGAD+ + WD+++ C Q +++
Sbjct: 395 IINTLS---SNDDGVVVSGADNGSLCFWDWRSGFCFQKIQT 432
Score = 190 (71.9 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 58/213 (27%), Positives = 96/213 (45%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSD 77
V+ D+ P W + + + +W+ + Q S VRA K PR ++ +G +
Sbjct: 187 VRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPFLFSGGE 246
Query: 78 DMQV-CV-FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQ 135
D QV C YN + R H + H V+ ++VHP+ L+T + D ++W+ + A
Sbjct: 247 DKQVKCWDLEYNKVIR-H-YHGHLSAVQALSVHPSLDVLVTCARDSTARVWDM-RTKAQV 303
Query: 136 QVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYH 195
F GHT+ V +V D +AS D TV++W L + TL H+K V + +
Sbjct: 304 HCFAGHTNTVADVVCQSVDPQVI-TASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIH- 361
Query: 196 GGDKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
+ + + A +K W +Q L SG
Sbjct: 362 --PRLNMFASASPDNIKQWKLPKGEFMQNL-SG 391
Score = 169 (64.5 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 39/107 (36%), Positives = 52/107 (48%)
Query: 114 LLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLG 173
LL S M++K W W +V GHT +V + + P N FAS DR +K+W L
Sbjct: 157 LLPSKAPMMMKP-KWHAPWKLYRVASGHTGWVRAVDVEP-GNQWFASGGADRIIKIWDLA 214
Query: 174 SASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ-NK 219
S +L GH V V P+L SG +D+ VK WD + NK
Sbjct: 215 SGQLKLSLTGHISSVRAVKV--SPRHPFLFSGGEDKQVKCWDLEYNK 259
Score = 114 (45.2 bits), Expect = 0.00046, P = 0.00046
Identities = 31/125 (24%), Positives = 52/125 (41%)
Query: 98 HSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNT 157
H+ +VR V V P + + D +IK+W+ + GH V + ++P+
Sbjct: 183 HTGWVRAVDVEPGNQWFASGGADRIIKIWDLASG-QLKLSLTGHISSVRAVKVSPRHPFL 241
Query: 158 FASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
F+ D+ VK W L GH V + + D L++ A D ++WD +
Sbjct: 242 FSGGE-DKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLD--VLVTCARDSTARVWDMR 298
Query: 218 NKTCV 222
K V
Sbjct: 299 TKAQV 303
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 205 (77.2 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 55/225 (24%), Positives = 97/225 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWN-HETNQNVKSFEVCDLPVRAAKFVPRK 69
L+ V CC HP + ++ ++ + +WN + N + + V +
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVR-CVAVHPTQPFLLTSSDDMLIKLWNW 128
+ + + S D V V++ T ER + H+ +V C + T SDD +KLW+
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
K A Q F+ +T+ V+ + N + S +D +KVW L +T+ GH V
Sbjct: 183 RKK-AAVQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSV 239
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQ----NKTCVQTLESGI 229
+ G YL+S A D V++WD + + CV+ + +
Sbjct: 240 TGLSLSSEGS--YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 282
Score = 153 (58.9 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 42/188 (22%), Positives = 91/188 (48%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G V +W+ V++F+ V A F + I++G D + V++ + ++
Sbjct: 174 DGTVKLWDIRKKAAVQTFQNT-YQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 232
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN---WEKAWACQQVFEGHTHYVMQIVIN- 151
H+D V +++ +LL+++ D +++W+ + C ++F+G+ H + ++
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 292
Query: 152 --PKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDR 209
D + A+ S DR V VW S + L GH +N V ++ D+P ++S + D+
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHP--DEPIILSASSDK 350
Query: 210 LVKIWDYQ 217
+ + + Q
Sbjct: 351 RLYMGEIQ 358
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 51/213 (23%), Positives = 91/213 (42%)
Query: 22 DLH-PTEPWMLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIV-TGSDD 78
+LH T+ ML S V VW+ ET + VK + V + R +V TGSDD
Sbjct: 115 ELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDD 174
Query: 79 MQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVF 138
V +++ +F+ ++ V V + T +++ D IK+W+ +
Sbjct: 175 GTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTM 232
Query: 139 EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN------FTLEGHEKGVNCVD 192
GH V + ++ + + ++A +D TV+VW + +P F H N +
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 291
Query: 193 YYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
D + +G+ DR V +WD ++ + L
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKL 324
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 203 (76.5 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 55/164 (33%), Positives = 84/164 (51%)
Query: 72 IVTGSDDMQVCVFNYNTLE-----RFH-SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
I++ S D V V+ + + H S + HS +V+ V + F L+ S D ++L
Sbjct: 37 IISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRL 96
Query: 126 WNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ-LGSASPNFTLEG- 183
W+ K ++F+GHT VM + + DN S S D T+KVW LG FTLEG
Sbjct: 97 WDITKG-VSTRLFKGHTQDVMSVAFS-SDNRQIISGSRDATIKVWNTLGECK--FTLEGP 152
Query: 184 --HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
H+ V+C+ + + P ++SG+ D VKIWD ++ C TL
Sbjct: 153 EAHQDWVSCIRF--SPNTPTIVSGSWDNKVKIWDIKSFKCNHTL 194
Score = 200 (75.5 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 55/213 (25%), Positives = 98/213 (46%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
R L S V+ + + L+ ++ + +W+ + + F+ V + F
Sbjct: 64 RSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSD 123
Query: 69 KNWIVTGSDDMQVCVFNYNTLERF--HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
I++GS D + V+N +F EAH D+V C+ P P +++ S D +K+W
Sbjct: 124 NRQIISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIW 183
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ K++ C HT YV + I+P D + AS D +W+L S P + LE
Sbjct: 184 DI-KSFKCNHTLTDHTGYVNTVTISP-DGSLCASGGKDTFACLWELSSGKPLYKLEARNT 241
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK 219
+N + + +K +L + DD+++ IWD K
Sbjct: 242 -INALAF--SPNKYWLSAATDDKII-IWDLLTK 270
Score = 153 (58.9 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 39/139 (28%), Positives = 66/139 (47%)
Query: 94 SFEAHSDYVRCVAVHPTQP-FLLTSSDDMLIKLWNWEKAWA-----CQQVFEGHTHYVMQ 147
S H+ +V +AV P P +++SS D + +W A + +GH+H+V
Sbjct: 16 SLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQD 75
Query: 148 IVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGAD 207
+VI+ D S S D T+++W + +GH + V V + D +ISG+
Sbjct: 76 VVIS-HDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAF--SSDNRQIISGSR 132
Query: 208 DRLVKIWDYQNKTCVQTLE 226
D +K+W+ + C TLE
Sbjct: 133 DATIKVWNTLGE-CKFTLE 150
Score = 127 (49.8 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 40/136 (29%), Positives = 57/136 (41%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEG---HTHYVMQIVIN 151
F+ H+ V VA +++ S D IK+WN C+ EG H +V I +
Sbjct: 108 FKGHTQDVMSVAFSSDNRQIISGSRDATIKVWN--TLGECKFTLEGPEAHQDWVSCIRFS 165
Query: 152 PKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLV 211
P + T S S D VK+W + S N TL H VN V G SG D
Sbjct: 166 P-NTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGS--LCASGGKDTFA 222
Query: 212 KIWDYQNKTCVQTLES 227
+W+ + + LE+
Sbjct: 223 CLWELSSGKPLYKLEA 238
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 209 (78.6 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 49/174 (28%), Positives = 86/174 (49%)
Query: 60 VRAAKFVP-RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
+ A F P + +V+GS D +++ +T H+ + H+ +V V+ P + T S
Sbjct: 151 ILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGS 210
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP-----KDNNTFASASLDRTVKVWQLG 173
D +++W+ +K A +GH ++ + P + ASAS D TV++W +
Sbjct: 211 MDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVI 270
Query: 174 SASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
S + L GH+ V CV + G K Y + + DR +K+W+ Q T +QTL +
Sbjct: 271 SKRADIVLSGHKGSVTCVRW-GGTGKIY--TSSHDRTIKVWNSQTGTLIQTLSA 321
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 38/144 (26%), Positives = 65/144 (45%)
Query: 72 IVTGSDDMQVCVFNYNTLER-FHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+V+ SDD + +++ + + H V V P ++ ++ D +KLWN
Sbjct: 377 LVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRD 436
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
+ GH V Q + D+ S+S D T+KVW + + + L GH+ V
Sbjct: 437 GKFITTL-RGHVGAVYQCCFSA-DSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFA 494
Query: 191 VDYYHGGDKPYLISGADDRLVKIW 214
VD+ G K + SG D+ ++IW
Sbjct: 495 VDWSPDGQK--VGSGGKDKAIRIW 516
Score = 122 (48.0 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 25/82 (30%), Positives = 39/82 (47%)
Query: 134 CQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDY 193
C GH ++ +P ++T S S D T ++W + +P TL+GH V V Y
Sbjct: 140 CSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSY 199
Query: 194 YHGGDKPYLISGADDRLVKIWD 215
G + +G+ D V+IWD
Sbjct: 200 SPNG--AMIATGSMDNTVRIWD 219
Score = 112 (44.5 bits), Expect = 0.00084, P = 0.00084
Identities = 45/159 (28%), Positives = 68/159 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
I T S D + V+N T + AH+ V +A+ T L T+ D K+ +
Sbjct: 296 IYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALS-TDFILRTAYHDHTGKVPESD-- 352
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS-PNFTLEGHEKGVNC 190
+V + IN K SAS D T+ +W S+S P L GH+K VN
Sbjct: 353 --ADKVAMAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNH 410
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
V + D Y+ S D VK+W+ ++ + TL +
Sbjct: 411 VTF--SPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHV 447
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 205 (77.2 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 53/216 (24%), Positives = 94/216 (43%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
+ T D V C + P+ + + + V +W F VR+ F
Sbjct: 87 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDG 146
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
VT SDD + V++ + + S H ++VRC P ++++SDD +KLW+ +
Sbjct: 147 QSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-K 205
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ C + H +V + +P A+A +D TVKVW + + + H VN
Sbjct: 206 TSRECVHSYCEHGGFVTYVDFHPS-GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 264
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
+ ++ G+ YL++ + D +KI D + TL
Sbjct: 265 ALSFHPSGN--YLVTASSDSTLKILDLMEGRLLYTL 298
Score = 176 (67.0 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 46/155 (29%), Positives = 73/155 (47%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
VR AKF P IV+ SDD V +++ + E HS+ H +V V HP+ + +
Sbjct: 179 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGM 238
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D +K+W+ + Q ++ H+ V + +P N +AS D T+K+ L +
Sbjct: 239 DNTVKVWD-VRTHRLLQHYQLHSAAVNALSFHPS-GNYLVTASSDSTLKILDLMEGRLLY 296
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
TL GH+ V + G+ Y SG D V +W
Sbjct: 297 TLHGHQGPATTVAFSRTGE--YFASGGSDEQVMVW 329
Score = 157 (60.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 53/217 (24%), Positives = 87/217 (40%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++R D V C D + + + + VW+ + F V F
Sbjct: 42 LERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 101
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P + + +GS D V ++ N F AH+ VR V +T+SDD IK+W
Sbjct: 102 PSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVW 161
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + + + H ++V +P D SAS D+TVK+W S + H
Sbjct: 162 STHRQKFLFSLSQ-HINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 219
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
V VD++ G + + D VK+WD + +Q
Sbjct: 220 FVTYVDFHPSGT--CVAAAGMDNTVKVWDVRTHRLLQ 254
Score = 127 (49.8 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 36/142 (25%), Positives = 61/142 (42%)
Query: 88 TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQ 147
+LER H F+ H D V CV L + S D + +W+ + + F GH V
Sbjct: 41 SLER-H-FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYR-FTGHKDAVTC 97
Query: 148 IVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGAD 207
+ +P + AS S D+TV++W + H V V + G ++ +D
Sbjct: 98 VNFSPS-GHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQS--FVTASD 154
Query: 208 DRLVKIWDYQNKTCVQTLESGI 229
D+ +K+W + + +L I
Sbjct: 155 DKTIKVWSTHRQKFLFSLSQHI 176
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 206 (77.6 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 55/216 (25%), Positives = 93/216 (43%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
+ T D V C + P+ + + + V +W F VR+ F
Sbjct: 56 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+VT SDD V V++ + S H ++VRC P ++++SDD +KLW+ +
Sbjct: 116 QSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-K 174
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ C + H +V + +P A+A +D TVKVW + + H VN
Sbjct: 175 TSRECIHSYCEHGGFVTYVDFHPS-GTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVN 233
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
+ ++ G+ YLI+ + D +KI D + TL
Sbjct: 234 ALSFHPSGN--YLITASSDSTLKILDLMEGRLLYTL 267
Score = 178 (67.7 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 46/155 (29%), Positives = 73/155 (47%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
VR AKF P IV+ SDD V +++ + E HS+ H +V V HP+ + +
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D +K+W+ + Q ++ H+ V + +P N +AS D T+K+ L +
Sbjct: 208 DNTVKVWD-ARTHRLLQHYQLHSAAVNALSFHPS-GNYLITASSDSTLKILDLMEGRLLY 265
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
TL GH+ V + G+ Y SG D V +W
Sbjct: 266 TLHGHQGPATTVAFSRTGE--YFASGGSDEQVMVW 298
Score = 163 (62.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 52/217 (23%), Positives = 88/217 (40%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++R D V C D + + + + +W+ + F V F
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P + + +GS D V ++ N F AH+ VR V L+T+SDD +K+W
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + + + H ++V +P D SAS D+TVK+W S + H
Sbjct: 131 STHRQRFLFSLTQ-HINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECIHSYCEHGG 188
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
V VD++ G + + D VK+WD + +Q
Sbjct: 189 FVTYVDFHPSGT--CIAAAGMDNTVKVWDARTHRLLQ 223
Score = 112 (44.5 bits), Expect = 0.00058, P = 0.00058
Identities = 36/163 (22%), Positives = 68/163 (41%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLP--VRAAKFVPR 68
LT + V+C P ++++ + V +W+ + + + S+ C+ V F P
Sbjct: 141 LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSY--CEHGGFVTYVDFHPS 198
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW 128
I D V V++ T ++ HS V ++ HP+ +L+T+S D +K+ +
Sbjct: 199 GTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL 258
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
+ GH + + + FAS D V VW+
Sbjct: 259 MEG-RLLYTLHGHQGPATTVAFS-RTGEYFASGGSDEQVMVWK 299
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 204 (76.9 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 55/225 (24%), Positives = 97/225 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWN-HETNQNVKSFEVCDLPVRAAKFVPRK 69
L+ V CC HP + ++ ++ + +WN + N + + V +
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 121
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVR-CVAVHPTQPFLLTSSDDMLIKLWNW 128
+ + + S D V V++ T ER + H+ +V C + T SDD +KLW+
Sbjct: 122 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 181
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
K A Q F+ +T+ V+ + N + S +D +KVW L +T+ GH V
Sbjct: 182 RKK-AAIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSV 238
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQ----NKTCVQTLESGI 229
+ G YL+S A D V++WD + + CV+ + +
Sbjct: 239 TGLSLSSEGS--YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 281
Score = 153 (58.9 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 42/188 (22%), Positives = 91/188 (48%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G V +W+ +++F+ V A F + I++G D + V++ + ++
Sbjct: 173 DGTVKLWDIRKKAAIQTFQNT-YQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 231
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN---WEKAWACQQVFEGHTHYVMQIVIN- 151
H+D V +++ +LL+++ D +++W+ + C ++F+G+ H + ++
Sbjct: 232 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 291
Query: 152 --PKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDR 209
D + A+ S DR V VW S + L GH +N V ++ D+P +IS + D+
Sbjct: 292 SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHP--DEPIIISASSDK 349
Query: 210 LVKIWDYQ 217
+ + + Q
Sbjct: 350 RLYMGEIQ 357
Score = 118 (46.6 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 51/213 (23%), Positives = 91/213 (42%)
Query: 22 DLH-PTEPWMLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIV-TGSDD 78
+LH T+ ML S V VW+ ET + VK + V + R +V TGSDD
Sbjct: 114 ELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDD 173
Query: 79 MQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVF 138
V +++ +F+ ++ V V + T +++ D IK+W+ +
Sbjct: 174 GTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTM 231
Query: 139 EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN------FTLEGHEKGVNCVD 192
GH V + ++ + + ++A +D TV+VW + +P F H N +
Sbjct: 232 RGHADSVTGLSLSSEGSYLLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 290
Query: 193 YYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
D + +G+ DR V +WD ++ + L
Sbjct: 291 CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKL 323
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 204 (76.9 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 55/225 (24%), Positives = 97/225 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWN-HETNQNVKSFEVCDLPVRAAKFVPRK 69
L+ V CC HP + ++ ++ + +WN + N + + V +
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVR-CVAVHPTQPFLLTSSDDMLIKLWNW 128
+ + + S D V V++ T ER + H+ +V C + T SDD +KLW+
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
K A Q F+ +T+ V+ + N + S +D +KVW L +T+ GH V
Sbjct: 183 RKK-AAIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSV 239
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQ----NKTCVQTLESGI 229
+ G YL+S A D V++WD + + CV+ + +
Sbjct: 240 TGLSLSSEGS--YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 282
Score = 151 (58.2 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 41/188 (21%), Positives = 91/188 (48%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G V +W+ +++F+ V A F + I++G D + V++ + ++
Sbjct: 174 DGTVKLWDIRKKAAIQTFQNT-YQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 232
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN---WEKAWACQQVFEGHTHYVMQIVIN- 151
H+D V +++ +LL+++ D +++W+ + C ++F+G+ H + ++
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 292
Query: 152 --PKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDR 209
D + A+ S DR V VW S + L GH +N V ++ D+P ++S + D+
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHP--DEPIILSASSDK 350
Query: 210 LVKIWDYQ 217
+ + + Q
Sbjct: 351 RLYMGEIQ 358
Score = 118 (46.6 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 51/213 (23%), Positives = 91/213 (42%)
Query: 22 DLH-PTEPWMLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIV-TGSDD 78
+LH T+ ML S V VW+ ET + VK + V + R +V TGSDD
Sbjct: 115 ELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDD 174
Query: 79 MQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVF 138
V +++ +F+ ++ V V + T +++ D IK+W+ +
Sbjct: 175 GTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTM 232
Query: 139 EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN------FTLEGHEKGVNCVD 192
GH V + ++ + + ++A +D TV+VW + +P F H N +
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 291
Query: 193 YYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
D + +G+ DR V +WD ++ + L
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKL 324
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 204 (76.9 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 55/225 (24%), Positives = 97/225 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWN-HETNQNVKSFEVCDLPVRAAKFVPRK 69
L+ V CC HP + ++ ++ + +WN + N + + V +
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVR-CVAVHPTQPFLLTSSDDMLIKLWNW 128
+ + + S D V V++ T ER + H+ +V C + T SDD +KLW+
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
K A Q F+ +T+ V+ + N + S +D +KVW L +T+ GH V
Sbjct: 183 RKK-AAIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSV 239
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQ----NKTCVQTLESGI 229
+ G YL+S A D V++WD + + CV+ + +
Sbjct: 240 TGLSLSSEGS--YLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNV 282
Score = 151 (58.2 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 41/188 (21%), Positives = 91/188 (48%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G V +W+ +++F+ V A F + I++G D + V++ + ++
Sbjct: 174 DGTVKLWDIRKKAAIQTFQNT-YQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 232
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN---WEKAWACQQVFEGHTHYVMQIVIN- 151
H+D V +++ +LL+++ D +++W+ + C ++F+G+ H + ++
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRC 292
Query: 152 --PKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDR 209
D + A+ S DR V VW S + L GH +N V ++ D+P ++S + D+
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHP--DEPIILSASSDK 350
Query: 210 LVKIWDYQ 217
+ + + Q
Sbjct: 351 RLYMGEIQ 358
Score = 118 (46.6 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 51/213 (23%), Positives = 91/213 (42%)
Query: 22 DLH-PTEPWMLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIV-TGSDD 78
+LH T+ ML S V VW+ ET + VK + V + R +V TGSDD
Sbjct: 115 ELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDD 174
Query: 79 MQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVF 138
V +++ +F+ ++ V V + T +++ D IK+W+ +
Sbjct: 175 GTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTM 232
Query: 139 EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN------FTLEGHEKGVNCVD 192
GH V + ++ + + ++A +D TV+VW + +P F H N +
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNA-MDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLR 291
Query: 193 YYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
D + +G+ DR V +WD ++ + L
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKL 324
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 204 (76.9 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 55/225 (24%), Positives = 97/225 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWN-HETNQNVKSFEVCDLPVRAAKFVPRK 69
L+ V CC HP + ++ ++ + +WN + N + + V +
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVR-CVAVHPTQPFLLTSSDDMLIKLWNW 128
+ + + S D V V++ T ER + H+ +V C + T SDD +KLW+
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
K A Q F+ +T+ V+ + N + S +D +KVW L +T+ GH V
Sbjct: 183 RKK-AAIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSV 239
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQ----NKTCVQTLESGI 229
+ G YL+S A D V++WD + + CV+ + +
Sbjct: 240 TGLSLSSEGS--YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 282
Score = 151 (58.2 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 41/188 (21%), Positives = 91/188 (48%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G V +W+ +++F+ V A F + I++G D + V++ + ++
Sbjct: 174 DGTVKLWDIRKKAAIQTFQNT-YQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 232
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN---WEKAWACQQVFEGHTHYVMQIVIN- 151
H+D V +++ +LL+++ D +++W+ + C ++F+G+ H + ++
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 292
Query: 152 --PKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDR 209
D + A+ S DR V VW S + L GH +N V ++ D+P ++S + D+
Sbjct: 293 SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHP--DEPIILSASSDK 350
Query: 210 LVKIWDYQ 217
+ + + Q
Sbjct: 351 RLYMGEIQ 358
Score = 118 (46.6 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 51/213 (23%), Positives = 91/213 (42%)
Query: 22 DLH-PTEPWMLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIV-TGSDD 78
+LH T+ ML S V VW+ ET + VK + V + R +V TGSDD
Sbjct: 115 ELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDD 174
Query: 79 MQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVF 138
V +++ +F+ ++ V V + T +++ D IK+W+ +
Sbjct: 175 GTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTM 232
Query: 139 EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN------FTLEGHEKGVNCVD 192
GH V + ++ + + ++A +D TV+VW + +P F H N +
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 291
Query: 193 YYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
D + +G+ DR V +WD ++ + L
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKL 324
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 204 (76.9 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 55/216 (25%), Positives = 93/216 (43%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
+ T D V C + P+ + + + V +W F VR+ F
Sbjct: 18 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 77
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
VT SDD V V+ + + S H ++VRC P ++++SDD +KLW+ +
Sbjct: 78 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-K 136
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ C + H +V + +P A+A +D TVKVW + + + H VN
Sbjct: 137 SSRECVHSYCEHGGFVTYVDFHPS-GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 195
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
+ ++ G+ YLI+ + D +KI D + TL
Sbjct: 196 GLSFHPSGN--YLITASSDSTLKILDLMEGRLLYTL 229
Score = 180 (68.4 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 44/147 (29%), Positives = 67/147 (45%)
Query: 78 DMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQV 137
D + V++ R + F H D V CV P+ L + S D +++W V
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV-PNVKGESTV 60
Query: 138 FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGG 197
F HT V + D +F +AS D+TVKVW F+L H V C +
Sbjct: 61 FRAHTATVRSVHFC-SDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKF--SP 117
Query: 198 DKPYLISGADDRLVKIWDYQNKTCVQT 224
D ++S +DD+ VK+WD ++ CV +
Sbjct: 118 DGRLIVSASDDKTVKLWDKSSRECVHS 144
Score = 176 (67.0 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 46/155 (29%), Positives = 74/155 (47%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
VR AKF P IV+ SDD V +++ ++ E HS+ H +V V HP+ + +
Sbjct: 110 VRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 169
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D +K+W+ + Q ++ H+ V + +P N +AS D T+K+ L +
Sbjct: 170 DNTVKVWD-VRTHRLLQHYQLHSAAVNGLSFHPS-GNYLITASSDSTLKILDLMEGRLLY 227
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
TL GH+ V + G+ Y SG D V +W
Sbjct: 228 TLHGHQGPATTVAFSRTGE--YFASGGSDEQVMVW 260
Score = 144 (55.7 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 47/183 (25%), Positives = 75/183 (40%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
VW+ + F V F P + + +GS D V ++ N F AH+
Sbjct: 7 VWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTA 66
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
VR V +T+SDD +K+W + + + H ++V +P D S
Sbjct: 67 TVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ-HINWVRCAKFSP-DGRLIVS 124
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 220
AS D+TVK+W S + H V VD++ G + + D VK+WD +
Sbjct: 125 ASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGT--CIAAAGMDNTVKVWDVRTHR 182
Query: 221 CVQ 223
+Q
Sbjct: 183 LLQ 185
>POMBASE|SPAC12G12.14c [details] [associations]
symbol:pfs2 "WD repeat protein Pfs2" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=ISO] [GO:0006379 "mRNA
cleavage" evidence=ISO] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC12G12.14c GO:GO:0005829 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006378 GO:GO:0000070 GO:GO:2000045 GO:GO:0005847
GO:GO:0006379 KO:K15542 HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD
PIR:T37587 RefSeq:NP_592884.1 ProteinModelPortal:Q9UTN4
STRING:Q9UTN4 EnsemblFungi:SPAC12G12.14c.1 GeneID:2543089
KEGG:spo:SPAC12G12.14c OMA:TALCTQW NextBio:20804117 Uniprot:Q9UTN4
Length = 509
Score = 207 (77.9 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 52/178 (29%), Positives = 82/178 (46%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSD 77
V+C + W+++ G V + N NVK + ++ VR F P + VT SD
Sbjct: 126 VRCAEWSTDGRWLISGDGGGMVKYFEPNLN-NVKIVQAHEMEVRDVAFSPNDSKFVTASD 184
Query: 78 DMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQV 137
D + V+N++ H V+ V HP++ L + S D L+K W+ + C
Sbjct: 185 DGSLKVWNFHMSTEELKLTGHGWDVKTVDWHPSKGLLASGSKDNLVKFWD-PRTGTCIAT 243
Query: 138 FEGHTHYVMQIVINPK-DNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYY 194
GH + +MQ +N A+ S D T +V+ L + L GHEK VNCV ++
Sbjct: 244 LHGHKNTIMQASFQKNFGSNYLATVSRDSTCRVFDLRAMKDVRVLRGHEKDVNCVTWH 301
Score = 167 (63.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 56/217 (25%), Positives = 94/217 (43%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVR----AAKFVPRK 69
RS+R P P + +LY + + +N+ ++ K R ++ P
Sbjct: 35 RSNRYHIHVPRPN-PNQIINLYPPYEYKYNNTSSLCTKYIHTSANKARHVINVVRWTPDG 93
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDY-VRCVAVHPTQPFLLTSSDDMLIKLWNW 128
++TGS + ++N T F DY VRC +L++ ++K +
Sbjct: 94 RRLLTGSSTGEFTLWNGLTFN-FELINQSHDYAVRCAEWSTDGRWLISGDGGGMVKYF-- 150
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
E ++ + H V + +P D+ F +AS D ++KVW ++ L GH V
Sbjct: 151 EPNLNNVKIVQAHEMEVRDVAFSPNDSK-FVTASDDGSLKVWNFHMSTEELKLTGHGWDV 209
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
VD++ K L SG+ D LVK WD + TC+ TL
Sbjct: 210 KTVDWHPS--KGLLASGSKDNLVKFWDPRTGTCIATL 244
Score = 153 (58.9 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 50/196 (25%), Positives = 80/196 (40%)
Query: 30 MLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTL 89
+L G +WN T + D VR A++ W+++G V F N L
Sbjct: 96 LLTGSSTGEFTLWNGLTFNFELINQSHDYAVRCAEWSTDGRWLISGDGGGMVKYFEPN-L 154
Query: 90 ERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIV 149
+AH VR VA P +T+SDD +K+WN+ + + GH V +
Sbjct: 155 NNVKIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNFHMSTE-ELKLTGHGWDVKTVD 213
Query: 150 INPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDR 209
+P AS S D VK W + + TL GH+ + + YL + + D
Sbjct: 214 WHPS-KGLLASGSKDNLVKFWDPRTGTCIATLHGHKNTIMQASFQKNFGSNYLATVSRDS 272
Query: 210 LVKIWDYQNKTCVQTL 225
+++D + V+ L
Sbjct: 273 TCRVFDLRAMKDVRVL 288
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 206 (77.6 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 52/198 (26%), Positives = 87/198 (43%)
Query: 30 MLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
+LAS + +W + F+ PVR+ F ++ + S+D + V+N
Sbjct: 74 LLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYR 133
Query: 89 LERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQI 148
+S H+ +VRC P +++ S+D IK+W+ C F + +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-QCVNNFSDFVGFANFV 192
Query: 149 VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADD 208
NP + ASA D TVK+W + + H GVNCV ++ G+ YLI+ + D
Sbjct: 193 AFNP-NGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGN--YLITASSD 249
Query: 209 RLVKIWDYQNKTCVQTLE 226
+KI D + TL+
Sbjct: 250 GTLKILDLLEGRLIYTLQ 267
Score = 184 (69.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 46/163 (28%), Positives = 76/163 (46%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
+ + F P + TGS D + +++ R + H D + V P L ++S
Sbjct: 21 ITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLLASASR 80
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D I+LW +K + F+ HT V + + D ASAS D+++KVW + +
Sbjct: 81 DRTIRLWIPDKRGKSSE-FKAHTAPVRSVDFSA-DGQFLASASEDKSIKVWNMYRQRFLY 138
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCV 222
+L H V C + D ++S ++D+ +KIWD NK CV
Sbjct: 139 SLYRHTHWVRCAKF--SPDGRLIVSCSEDKTIKIWDTTNKQCV 179
Score = 148 (57.2 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 43/161 (26%), Positives = 71/161 (44%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
+ + +F P N + + S D + ++ + + F+AH+ VR V FL ++S+
Sbjct: 63 ITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASE 122
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D IK+WN + ++ HTH+V +P D S S D+T+K+W +
Sbjct: 123 DKSIKVWNMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ-NK 219
N V + G + S D VKIWD + NK
Sbjct: 181 NFSDFVGFANFVAFNPNGT--CIASAGSDHTVKIWDIRVNK 219
Score = 147 (56.8 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 48/202 (23%), Positives = 88/202 (43%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI 72
A + V+ D ++ ++ + + VWN + + S VR AKF P I
Sbjct: 100 AHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLI 159
Query: 73 VTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAW 132
V+ S+D + +++ + ++F + VA +P + ++ D +K+W+
Sbjct: 160 VSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNK 219
Query: 133 ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVD 192
Q ++ H+ V + +P N +AS D T+K+ L +TL+GH V V
Sbjct: 220 LLQH-YQVHSGGVNCVSFHPS-GNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 277
Query: 193 YYHGGDKPYLISGADDRLVKIW 214
+ GG+ SG D V +W
Sbjct: 278 FSKGGE--LFTSGGADAQVLLW 297
Score = 143 (55.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 39/133 (29%), Positives = 64/133 (48%)
Query: 89 LERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE-KAWACQQVFEGHTHYVMQ 147
LER+ F+ H + V P L T S D + LW+ +A A + V GH +
Sbjct: 10 LERY--FKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYV--GHKDVITS 65
Query: 148 IVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGAD 207
+ +P N ASAS DRT+++W + + H V VD+ D +L S ++
Sbjct: 66 VQFSPL-GNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDF--SADGQFLASASE 122
Query: 208 DRLVKIWD-YQNK 219
D+ +K+W+ Y+ +
Sbjct: 123 DKSIKVWNMYRQR 135
Score = 129 (50.5 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 39/165 (23%), Positives = 71/165 (43%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV---PRKNWIVT 74
V+C P +++ + + +W+ Q V +F D V A FV P I +
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS--DF-VGFANFVAFNPNGTCIAS 203
Query: 75 GSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWAC 134
D V +++ + ++ HS V CV+ HP+ +L+T+S D +K+ + +
Sbjct: 204 AGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLI 263
Query: 135 QQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
+ +GHT V + + K F S D V +W+ N+
Sbjct: 264 YTL-QGHTGPVFTVSFS-KGGELFTSGGADAQVLLWRTNFDELNY 306
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 206 (77.6 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 53/198 (26%), Positives = 87/198 (43%)
Query: 30 MLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
+LAS V +W + F+ PVR+ F ++ T S+D + V+N
Sbjct: 74 LLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYR 133
Query: 89 LERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQI 148
+S H+ +VRC P +++ S+D IK+W+ C F + +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-QCVNNFSDSVGFANFV 192
Query: 149 VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADD 208
NP + ASA D TVK+W + + H GVNCV ++ G+ Y+I+ + D
Sbjct: 193 DFNP-NGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGN--YIITASSD 249
Query: 209 RLVKIWDYQNKTCVQTLE 226
+KI D + TL+
Sbjct: 250 GTLKILDLLEGRLIYTLQ 267
Score = 181 (68.8 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 45/170 (26%), Positives = 76/170 (44%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
+ + F P + T S D + ++N R + H D V V P L ++S
Sbjct: 21 ITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLLASASR 80
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D ++LW +K + F+ HT V + + D A+AS D+++KVW + +
Sbjct: 81 DRTVRLWIPDKRGKSSE-FKAHTAPVRSVDFSA-DGQFLATASEDKSIKVWNMYRQRFLY 138
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+L H V C + D ++S ++D+ +KIWD NK CV +
Sbjct: 139 SLYRHTHWVRCAKF--SPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSV 186
Score = 171 (65.3 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 54/222 (24%), Positives = 93/222 (41%)
Query: 1 MPLRLD--IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDL 58
+P + D ++R + D P+ + + ++ + +WN + +
Sbjct: 2 LPFQEDPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKD 61
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
V + +F P N + + S D V ++ + + F+AH+ VR V FL T+S
Sbjct: 62 VVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATAS 121
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
+D IK+WN + ++ HTH+V +P D S S D+T+K+W +
Sbjct: 122 EDKSIKVWNMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCV 179
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ-NK 219
N VD+ G + S D VKIWD + NK
Sbjct: 180 NNFSDSVGFANFVDFNPNGT--CIASAGSDHTVKIWDIRVNK 219
Score = 141 (54.7 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 50/210 (23%), Positives = 89/210 (42%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI 72
A + V+ D ++ + + + VWN + + S VR AKF P I
Sbjct: 100 AHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLI 159
Query: 73 VTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAW 132
V+ S+D + +++ + ++F + V +P + ++ D +K+W+
Sbjct: 160 VSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNK 219
Query: 133 ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVD 192
Q ++ H+ V + +P N +AS D T+K+ L +TL+GH V V
Sbjct: 220 LLQH-YQVHSGGVNCVSFHPS-GNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS 277
Query: 193 YYHGGDKPYLISGADDRLVKIW----DYQN 218
+ GG+ SG D V +W DY N
Sbjct: 278 FSKGGE--LFSSGGADTQVLLWRTNFDYLN 305
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 204 (76.9 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 55/216 (25%), Positives = 93/216 (43%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
+ T D V C + P+ + + + V +W F VR+ F
Sbjct: 56 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
VT SDD V V+ + + S H ++VRC P ++++SDD +KLW+ +
Sbjct: 116 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-K 174
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ C + H +V + +P A+A +D TVKVW + + + H VN
Sbjct: 175 SSRECVHSYCEHGGFVTYVDFHPS-GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 233
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
+ ++ G+ YLI+ + D +KI D + TL
Sbjct: 234 GLSFHPSGN--YLITASSDSTLKILDLMEGRLLYTL 267
Score = 176 (67.0 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 46/155 (29%), Positives = 74/155 (47%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
VR AKF P IV+ SDD V +++ ++ E HS+ H +V V HP+ + +
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D +K+W+ + Q ++ H+ V + +P N +AS D T+K+ L +
Sbjct: 208 DNTVKVWD-VRTHRLLQHYQLHSAAVNGLSFHPS-GNYLITASSDSTLKILDLMEGRLLY 265
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
TL GH+ V + G+ Y SG D V +W
Sbjct: 266 TLHGHQGPATTVAFSRTGE--YFASGGSDEQVMVW 298
Score = 159 (61.0 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 52/217 (23%), Positives = 86/217 (39%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++R D V C D + + + + VW+ + F V F
Sbjct: 11 LERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P + + +GS D V ++ N F AH+ VR V +T+SDD +K+W
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + + H ++V +P D SAS D+TVK+W S + H
Sbjct: 131 ATHRQKFLFSLSQ-HINWVRCAKFSP-DGRLIVSASDDKTVKLWDKSSRECVHSYCEHGG 188
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
V VD++ G + + D VK+WD + +Q
Sbjct: 189 FVTYVDFHPSGT--CIAAAGMDNTVKVWDVRTHRLLQ 223
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 204 (76.9 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 55/225 (24%), Positives = 97/225 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWN-HETNQNVKSFEVCDLPVRAAKFVPRK 69
L+ V CC HP + ++ ++ + +WN + N + + V +
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 121
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVR-CVAVHPTQPFLLTSSDDMLIKLWNW 128
+ + + S D V V++ T ER + H+ +V C + T SDD +KLW+
Sbjct: 122 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 181
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
K A Q F+ +T+ V+ + N + S +D +KVW L +T+ GH V
Sbjct: 182 RKK-AAIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSV 238
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQ----NKTCVQTLESGI 229
+ G YL+S A D V++WD + + CV+ + +
Sbjct: 239 TGLSLSSEGS--YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 281
Score = 138 (53.6 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 39/176 (22%), Positives = 84/176 (47%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G V +W+ +++F+ V A F + I++G D + V++ + ++
Sbjct: 173 DGTVKLWDIRKKAAIQTFQNT-YQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 231
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN---WEKAWACQQVFEGHTHYVMQIVIN- 151
H+D V +++ +LL+++ D +++W+ + C ++F+G+ H + ++
Sbjct: 232 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 291
Query: 152 --PKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISG 205
D + A+ S DR V VW S + L GH +N V ++ D+P + +G
Sbjct: 292 SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHP--DEPIIETG 345
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 51/213 (23%), Positives = 91/213 (42%)
Query: 22 DLH-PTEPWMLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIV-TGSDD 78
+LH T+ ML S V VW+ ET + VK + V + R +V TGSDD
Sbjct: 114 ELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDD 173
Query: 79 MQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVF 138
V +++ +F+ ++ V V + T +++ D IK+W+ +
Sbjct: 174 GTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTM 231
Query: 139 EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN------FTLEGHEKGVNCVD 192
GH V + ++ + + ++A +D TV+VW + +P F H N +
Sbjct: 232 RGHADSVTGLSLSSEGSYLLSNA-MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 290
Query: 193 YYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
D + +G+ DR V +WD ++ + L
Sbjct: 291 CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKL 323
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 204 (76.9 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 54/220 (24%), Positives = 99/220 (45%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
HP M+++ + + VW++E ++ + V+ F + + S DM + +
Sbjct: 117 HPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKL 176
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+++ E + H V VA+ P ++++S D +K+W + C + F GH
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGY-CVKTFTGHRE 235
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYY----H---- 195
+V + N +D AS S D+TV+VW + + L HE V C+ + H
Sbjct: 236 WVRMVRPN-QDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTIS 294
Query: 196 ---GGDK-------PYLISGADDRLVKIWDYQNKTCVQTL 225
G + P+L+SG+ D+ +K+WD C+ TL
Sbjct: 295 EATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTL 334
Score = 200 (75.5 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 48/163 (29%), Positives = 83/163 (50%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV F P + +V+ S+D + V++Y + + + H+D V+ ++ T L + S
Sbjct: 110 PVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCS 169
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
DM IKLW+++ + C + GH H V + I P ++ SAS D+T+K+W++ +
Sbjct: 170 ADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTMKMWEVATGYCV 227
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
T GH + V V G L S ++D+ V++W K C
Sbjct: 228 KTFTGHREWVRMVRPNQDGT--LLASCSNDQTVRVWVVATKEC 268
Score = 173 (66.0 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 38/132 (28%), Positives = 67/132 (50%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
++ H V V HP ++++S+D IK+W++E A ++ +GHT V I +
Sbjct: 102 YALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYE-AGDFERTLKGHTDSVQDISFD- 159
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
+ AS S D T+K+W T+ GH+ V+ V GD +++S + D+ +K
Sbjct: 160 QTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD--HIVSASRDKTMK 217
Query: 213 IWDYQNKTCVQT 224
+W+ CV+T
Sbjct: 218 MWEVATGYCVKT 229
Score = 155 (59.6 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 53/227 (23%), Positives = 94/227 (41%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
R + V + P ++++ + + +W T VK+F VR +
Sbjct: 186 RTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQD 245
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVA-----VHPT------------- 110
+ + S+D V V+ T E H V C++ HPT
Sbjct: 246 GTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSG 305
Query: 111 --QPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVK 168
PFLL+ S D IK+W+ C GH ++V ++ +P + A D+T++
Sbjct: 306 KPGPFLLSGSRDKTIKMWDISTGM-CLMTLVGHDNWVRGVLFHPGGRFVVSCAD-DKTLR 363
Query: 169 VWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+W + TL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 364 IWDYKNKRCMKTLSAHEHFVTSLDFHKAS--PYVVTGSVDQTVKVWE 408
Score = 145 (56.1 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 54/239 (22%), Positives = 105/239 (43%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
D +R L +D V+ T + + + + +W+ + + +++ D V +
Sbjct: 141 DFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI 200
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P + IV+ S D + ++ T +F H ++VR V + L + S+D +++
Sbjct: 201 MPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRV 260
Query: 126 WNWEKAWACQQVFEGHTHYVMQIVINPKDNN-TFASASLDRTVKVWQLG----SASPNFT 180
W C+ H H V I P+ + T + A+ K + G S S + T
Sbjct: 261 WVVATK-ECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKT 319
Query: 181 LEGHEKGVN-CVDYYHGGDK--------P---YLISGADDRLVKIWDYQNKTCVQTLES 227
++ + C+ G D P +++S ADD+ ++IWDY+NK C++TL +
Sbjct: 320 IKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSA 378
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 203 (76.5 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 56/225 (24%), Positives = 97/225 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWN-HETNQNVKSFEVCDLPVRAAKFVPRK 69
L+ V CC HP + ++ ++ + +WN + N + + V +
Sbjct: 89 LSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 148
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVR-CVAVHPTQPFLLTSSDDMLIKLWNW 128
+ + + S D V V++ T ER + H+ +V C + T SDD +KLW+
Sbjct: 149 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 208
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
K A Q F+ +T+ V+ + N + S +D +KVW L +T+ GH V
Sbjct: 209 RKK-AAVQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSV 265
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQ----NKTCVQTLESGI 229
+ G YL+S A D V+IWD + + CV+ + +
Sbjct: 266 TGLSLSSEGS--YLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNV 308
Score = 146 (56.5 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 41/188 (21%), Positives = 90/188 (47%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G V +W+ V++F+ V A F + I++G D + V++ + ++
Sbjct: 200 DGTVKLWDIRKKAAVQTFQNT-YQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 258
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN---WEKAWACQQVFEGHTHYVMQIVIN- 151
H+D V +++ +LL+++ D +++W+ + C ++F+G+ H + ++
Sbjct: 259 RGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRC 318
Query: 152 --PKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDR 209
D + A S DR V VW S + L GH VN + ++ ++P ++S + D+
Sbjct: 319 SWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHP--EEPIILSASSDK 376
Query: 210 LVKIWDYQ 217
+ + + Q
Sbjct: 377 RLYMGEIQ 384
Score = 115 (45.5 bits), Expect = 0.00024, P = 0.00024
Identities = 50/213 (23%), Positives = 90/213 (42%)
Query: 22 DLH-PTEPWMLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIV-TGSDD 78
+LH T+ ML S V VW+ ET + VK + V + R +V TGSDD
Sbjct: 141 ELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDD 200
Query: 79 MQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVF 138
V +++ +F+ ++ V V + T +++ D IK+W+ +
Sbjct: 201 GTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN-KLTYTM 258
Query: 139 EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN------FTLEGHEKGVNCVD 192
GH V + ++ + + ++A +D TV++W + +P F H N +
Sbjct: 259 RGHADSVTGLSLSSEGSYLLSNA-MDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLR 317
Query: 193 YYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
D + G+ DR V +WD ++ + L
Sbjct: 318 CSWSPDGSKIAGGSADRFVYVWDTTSRRILYKL 350
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 184 (69.8 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
Identities = 48/157 (30%), Positives = 77/157 (49%)
Query: 60 VRAAKFVPRKN-WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
VR P N W +TGS+D + V++ T + + H VR VAV P+L + S
Sbjct: 142 VRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVS 201
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
+D +K W+ EK + + GH V + I+P + A+A D +K+W + + P
Sbjct: 202 EDKTVKCWDLEKNQIIRDYY-GHLSGVRTVSIHPT-LDLIATAGRDSVIKLWDMRTRIPV 259
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
TL GH+ +N V P ++S + D V++WD
Sbjct: 260 ITLVGHKGPINQVQCTPVD--PQVVSSSTDATVRLWD 294
Score = 161 (61.7 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 34/113 (30%), Positives = 53/113 (46%)
Query: 111 QPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVW 170
+ ++ + +L + W W +V GH +V + I+P DN F + S D T+KVW
Sbjct: 108 EELIVNRYEKLLSQRPEWHAPWKLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVW 167
Query: 171 QLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
L + TL GH V D PYL S ++D+ VK WD + ++
Sbjct: 168 DLATGKLKTTLAGHVMTVR--DVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIR 218
Score = 140 (54.3 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 40/130 (30%), Positives = 61/130 (46%)
Query: 98 HSDYVRCVAVHPTQ-PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNN 156
H +VRCVA+ P + +T S+D +K+W+ + GH V + ++ +
Sbjct: 138 HLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATG-KLKTTLAGHVMTVRDVAVSDRHPY 196
Query: 157 TFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGAD-DRLVKIWD 215
F S S D+TVK W L GH GV V + D LI+ A D ++K+WD
Sbjct: 197 LF-SVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLD---LIATAGRDSVIKLWD 252
Query: 216 YQNKTCVQTL 225
+ + V TL
Sbjct: 253 MRTRIPVITL 262
Score = 135 (52.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 49/215 (22%), Positives = 90/215 (41%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
+T R V D HP ++ + + V W+ E NQ ++ + VR P +
Sbjct: 183 MTVRD--VAVSDRHP---YLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLD 237
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
I T D + +++ T + H + V P P +++SS D ++LW+
Sbjct: 238 LIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWD-VV 296
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
A +V H V ++PK+ + ASA D ++ W L S E + G+
Sbjct: 297 AGKTMKVLTHHKRSVRATALHPKEFSV-ASACTD-DIRSWGLAEGSLLTNFESEKTGI-- 352
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
++ L +G D+ ++ +DY++ Q+L
Sbjct: 353 INTLSINQDDVLFAGGDNGVLSFYDYKSGHKYQSL 387
Score = 42 (19.8 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 28 PWMLASLYNGHV 39
PW L+ + NGH+
Sbjct: 128 PWKLSRVINGHL 139
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 203 (76.5 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 53/216 (24%), Positives = 93/216 (43%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
+ D V C + P+ + + + V +W F VR+ F
Sbjct: 56 RFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
VT SDD V V++ + + S H ++VRC P ++++SDD +KLW+ +
Sbjct: 116 QSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-K 174
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ C + H +V + +P A+A +D TVKVW + + + H VN
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPS-GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 233
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
+ ++ G+ YL++ + D +KI D + TL
Sbjct: 234 ALSFHPSGN--YLVTASSDSTLKILDLMEGRLLYTL 267
Score = 178 (67.7 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 50/176 (28%), Positives = 80/176 (45%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
V VW+ + + S VR AKF P IV+ SDD V +++ + E HS+ H
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
+V V HP+ + + D +K+W+ + Q ++ H+ V + +P N
Sbjct: 187 GGFVTYVDFHPSGTCIAAAGMDNTVKVWD-VRTHRLLQHYQLHSAAVNALSFHPS-GNYL 244
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
+AS D T+K+ L +TL GH+ V + G+ Y SG D V +W
Sbjct: 245 VTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGE--YFASGGSDEQVMVW 298
Score = 149 (57.5 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 51/217 (23%), Positives = 86/217 (39%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++R D V D + + + + VW+ + F V F
Sbjct: 11 LERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFS 70
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P + + +GS D V ++ N F AH+ VR V +T+SDD +K+W
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + + + H ++V +P D SAS D+TVK+W S + H
Sbjct: 131 STHRQKFLFSLSQ-HINWVRCAKFSP-DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
V VD++ G + + D VK+WD + +Q
Sbjct: 189 FVTYVDFHPSGT--CIAAAGMDNTVKVWDVRTHRLLQ 223
Score = 119 (46.9 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 36/142 (25%), Positives = 60/142 (42%)
Query: 88 TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQ 147
+LER H F+ H D V V L + S D + +W+ + + F GH V
Sbjct: 10 SLER-H-FKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYR-FAGHKDAVTC 66
Query: 148 IVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGAD 207
+ +P + AS S D+TV++W + H V V + G ++ +D
Sbjct: 67 VNFSPS-GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQS--FVTASD 123
Query: 208 DRLVKIWDYQNKTCVQTLESGI 229
D+ VK+W + + +L I
Sbjct: 124 DKTVKVWSTHRQKFLFSLSQHI 145
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 207 (77.9 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 52/173 (30%), Positives = 83/173 (47%)
Query: 53 FEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP 112
F + +LPV P K+ +V+ +D V + H+D++ HP+
Sbjct: 348 FRLHELPVSCVSMQPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGD 407
Query: 113 FLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
L TSS D +KLW+ K C FEGH+ V + N AS+SLD+T K+W +
Sbjct: 408 KLATSSGDTTVKLWDLCKG-DCILTFEGHSRAVWSCTWH-SCGNFVASSSLDKTSKIWDV 465
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
S TL GH VN ++++ + L++ + D+ + IWD + C Q+L
Sbjct: 466 NSERCRCTLYGHTDSVNSIEFFPFSNT--LLTSSADKTLSIWDARTGICEQSL 516
Score = 133 (51.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 43/180 (23%), Positives = 78/180 (43%)
Query: 20 CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDM 79
CC HP+ + S + V +W+ + +FE V + + N++ + S D
Sbjct: 400 CC-FHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDK 458
Query: 80 QVCVFNYNTLERFH-SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVF 138
+++ N+ ER + H+D V + P LLTSS D + +W+ + C+Q
Sbjct: 459 TSKIWDVNS-ERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWD-ARTGICEQSL 516
Query: 139 EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKGVNCVDYYHGG 197
GH H + + +P+ + AS K+W P +++ G G N V++ G
Sbjct: 517 YGHMHSINDAIFDPR-GHMIASCDACGVTKLWDFRKLLPIVSIDIGPSPG-NEVNFDSSG 574
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 209 (78.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 53/157 (33%), Positives = 78/157 (49%)
Query: 71 WIV--TGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW 128
W V +GSDD V +++ T + E HS +V VA P L + S D ++LW+
Sbjct: 707 WAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWD- 765
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+ QQ GH+++V + +P D AS S D+TV++W + S TL GH V
Sbjct: 766 PATGSLQQTLRGHSNWVRSVAFSP-DGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTV 824
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
V + D L SG+ D+ V++WD T QTL
Sbjct: 825 RSVAF--SPDGRLLASGSFDKTVRLWDPATGTLQQTL 859
Score = 154 (59.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 24 HPTEPW-MLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQV 81
H W +LAS + V +W+ T ++ E V + F P + +GS D V
Sbjct: 702 HSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTV 761
Query: 82 CVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGH 141
+++ T + HS++VR VA P L + S D ++LW+ + QQ GH
Sbjct: 762 RLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWD-PATGSLQQTLRGH 820
Query: 142 THYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL 181
+ V + +P D AS S D+TV++W + + TL
Sbjct: 821 SDTVRSVAFSP-DGRLLASGSFDKTVRLWDPATGTLQQTL 859
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 203 (76.5 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 53/198 (26%), Positives = 87/198 (43%)
Query: 30 MLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
+LAS V +W + F+ PVR+ F ++ T S+D + V++
Sbjct: 32 LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 91
Query: 89 LERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQI 148
+S H+ +VRC P +++ S+D IK+W+ C F + +
Sbjct: 92 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-QCVNNFSDSVGFANFV 150
Query: 149 VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADD 208
NP ASA D+TVKVW + + H GVNC+ ++ G+ YLI+ + D
Sbjct: 151 DFNPS-GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGN--YLITASSD 207
Query: 209 RLVKIWDYQNKTCVQTLE 226
+KI D + TL+
Sbjct: 208 GTLKILDLLEGRLIYTLQ 225
Score = 169 (64.5 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 83 VFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHT 142
++N+ R + + H D V V P L ++S D ++LW +K + F+ HT
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE-FKAHT 60
Query: 143 HYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYL 202
V + + D A+AS D+++KVW + ++L H V C + D +
Sbjct: 61 APVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKF--SPDGRLI 117
Query: 203 ISGADDRLVKIWDYQNKTCVQTLESGI 229
+S ++D+ +KIWD NK CV +
Sbjct: 118 VSCSEDKTIKIWDTTNKQCVNNFSDSV 144
Score = 169 (64.5 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 48/180 (26%), Positives = 80/180 (44%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
+WN + + + V + +F P N + + S D V ++ + +F F+AH+
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
VR V FL T+S+D IK+W+ + ++ HTH+V +P D S
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVS 119
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ-NK 219
S D+T+K+W + N VD+ G + S D+ VK+WD + NK
Sbjct: 120 CSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGT--CIASAGSDQTVKVWDVRVNK 177
Score = 134 (52.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 48/191 (25%), Positives = 83/191 (43%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV---PRKNWIVT 74
V+C P +++ + + +W+ Q V +F D V A FV P I +
Sbjct: 105 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS--D-SVGFANFVDFNPSGTCIAS 161
Query: 75 GSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWAC 134
D V V++ + ++ HS V C++ HP+ +L+T+S D +K+ + +
Sbjct: 162 AGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLI 221
Query: 135 QQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC--VD 192
+ +GHT V + + K FAS D V +W+ NF E H KG+ +
Sbjct: 222 YTL-QGHTGPVFTVSFS-KGGELFASGGADTQVLLWRT-----NFD-ELHCKGLTKRNLK 273
Query: 193 YYHGGDKPYLI 203
H P+L+
Sbjct: 274 RLHFDSPPHLL 284
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 200 (75.5 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 52/188 (27%), Positives = 92/188 (48%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
VW T +++K+ + V F P+ N IV+GS D V +++ T + + AHSD
Sbjct: 140 VWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSD 199
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
V V + +++SS D L ++W+ + + + V + +P A
Sbjct: 200 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA- 258
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCV--DYYHGGDKPYLISGADDRLVKIWDYQN 218
A+LD T+K+W T GH+ C+ ++ G K +++SG++D +V IW+ Q+
Sbjct: 259 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNMVYIWNLQS 317
Query: 219 KTCVQTLE 226
K VQ L+
Sbjct: 318 KEVVQKLQ 325
Score = 191 (72.3 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 48/219 (21%), Positives = 95/219 (43%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+K L + V P W+ +S + + +W + K+ L + +
Sbjct: 64 LKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 123
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
+V+GSDD + V+ +T + + + HS+YV C +P +++ S D +++W
Sbjct: 124 SDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 183
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL-EGHE 185
+ + C + H+ V + N +D + S+S D ++W S TL +
Sbjct: 184 D-VRTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 241
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
V+ V + G Y+++ D +K+WDY C++T
Sbjct: 242 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKT 278
Score = 155 (59.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 41/169 (24%), Positives = 87/169 (51%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLP-VRAAKFVP 67
+ L A SD V + +++S Y+G +W+ + Q +K+ D P V KF P
Sbjct: 192 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 251
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP---FLLTSSDDMLIK 124
+I+ + D + +++Y+ + ++ H + C+ + + ++++ S+D ++
Sbjct: 252 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVY 311
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASL--DRTVKVWQ 171
+WN + Q++ +GHT V+ +P +N ASA+L D+T+K+W+
Sbjct: 312 IWNLQSKEVVQKL-QGHTDTVLCTACHPTEN-IIASAALENDKTIKLWK 358
Score = 152 (58.6 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 49/211 (23%), Positives = 93/211 (44%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
+ L S+ V CC+ +P +++ ++ V +W+ T + +K+ PV A F
Sbjct: 150 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD 209
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSF-EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
+ IV+ S D +++ + + + + + V V P ++L ++ D +KLW+
Sbjct: 210 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 269
Query: 128 WEKAWACQQVFEGHTH--YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
+ K C + + GH + Y + + S S D V +W L S L+GH
Sbjct: 270 YSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHT 328
Query: 186 KGVNCVDYYHGGDKPYLISGA--DDRLVKIW 214
V C H + + S A +D+ +K+W
Sbjct: 329 DTVLCTAC-HPTEN-IIASAALENDKTIKLW 357
Score = 128 (50.1 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 26/87 (29%), Positives = 47/87 (54%)
Query: 140 GHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDK 199
GHT V + +P + AS+S D+ +K+W T+ GH+ G++ V + D
Sbjct: 70 GHTKAVSAVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW--SSDS 126
Query: 200 PYLISGADDRLVKIWDYQNKTCVQTLE 226
L+SG+DD+ +K+W+ ++TL+
Sbjct: 127 RLLVSGSDDKTLKVWELSTGKSLKTLK 153
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 199 (75.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 54/218 (24%), Positives = 97/218 (44%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + VW+ T V + + V
Sbjct: 42 RVQMRTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLER----FHSFEAHSDYVRCVAVHPTQPFLLTS 117
+ P N++ G D ++N + E AH+ Y+ C ++TS
Sbjct: 102 TCAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNN-IVTS 160
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
S D LW+ E + VF GHT M + ++P D F S + D + K+W + +
Sbjct: 161 SGDTTCALWDIETGQQ-KTVFVGHTGDCMSLAVSP-DYKLFISGACDASAKLWDVREGTC 218
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ + +G+DD +++D
Sbjct: 219 RQTFTGHESDINAICFFPNGEA--ICTGSDDASCRLFD 254
Score = 136 (52.9 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 40/156 (25%), Positives = 67/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ V++ T + H+ S +V A P+ F+ D + ++N +
Sbjct: 70 LVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V HT Y+ D+N ++S D T +W + + GH G
Sbjct: 130 EGNVKVSRELSAHTGYLS--CCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHT-G- 185
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+C+ D ISGA D K+WD + TC QT
Sbjct: 186 DCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQT 221
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 199 (75.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 57/219 (26%), Positives = 98/219 (44%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H ++ L S +G + VW+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLT 116
+ P +++ G D +C +++ T E R H+ Y+ C ++T
Sbjct: 102 TCAYAPSGSFVACGGLD-NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IVT 159
Query: 117 SSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
SS DM LW+ E C F GHT VM + ++P D TF S + D + K+W +
Sbjct: 160 SSGDMTCALWDIETGQQCT-AFTGHTGDVMSLSLSP-DFRTFISGACDASAKLWDIRDGM 217
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N V ++ G+ +G+DD +++D
Sbjct: 218 CKQTFPGHESDINAVAFFPSGNA--FATGSDDATCRLFD 254
Score = 120 (47.3 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 38/156 (24%), Positives = 66/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ V++ T + H+ S +V A P+ F+ D + +++ +
Sbjct: 70 LVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + GH V
Sbjct: 130 EGNVRVSRELPGHTGYLS--CCRFLDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDV 187
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ D ISGA D K+WD ++ C QT
Sbjct: 188 MSLSL--SPDFRTFISGACDASAKLWDIRDGMCKQT 221
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 204 (76.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 54/166 (32%), Positives = 79/166 (47%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
V A +F P + I +G D V V+ +T + ++FE H + ++ P + + SD
Sbjct: 179 VSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSD 238
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D I+LWN A F GH +YV I +PK N S S D V +W + SA
Sbjct: 239 DKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPK-GNMLVSGSYDEAVFLWDVRSARVMK 297
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
+L H V+ +D G + S A D LV+IWD C++TL
Sbjct: 298 SLPAHSDPVSGIDVVWDGT--LIASCATDGLVRIWDTSTGQCLRTL 341
Score = 156 (60.0 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 51/194 (26%), Positives = 87/194 (44%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHS- 94
+G V VW T + + +FE + + P I +GSDD + ++N T + +
Sbjct: 197 DGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTP 256
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
F H +YV +A P L++ S D + LW+ A + + H+ V I + D
Sbjct: 257 FIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSL-PAHSDPVSGIDV-VWD 314
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKG--VNCVDYYHGGDKPYLISGADDRLVK 212
AS + D V++W + TL HE V+ V + G Y+++ D V+
Sbjct: 315 GTLIASCATDGLVRIWDTSTGQCLRTLV-HEDNPPVSSVKFSPNGK--YVLAWTLDDCVR 371
Query: 213 IWDYQNKTCVQTLE 226
+WDY C++T +
Sbjct: 372 LWDYVEGRCLKTYQ 385
Score = 121 (47.7 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 42/179 (23%), Positives = 75/179 (41%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
V A F P+ N +V+GS D V +++ + S AHSD V + V + + +
Sbjct: 264 VYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCAT 323
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASA-SLDRTVKVWQLGSASPN 178
D L+++W+ + + V + +P N + A +LD V++W
Sbjct: 324 DGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSP--NGKYVLAWTLDDCVRLWDYVEGRCL 381
Query: 179 FTLEGHEKGVNCVDYYHG-------GDKP---YLISGADDRLVKIWDYQNKTCVQTLES 227
T +GH + G G P + +SG++D + WD K +Q +E+
Sbjct: 382 KTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEA 440
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 203 (76.5 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 53/198 (26%), Positives = 87/198 (43%)
Query: 30 MLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
+LAS V +W + F+ PVR+ F ++ T S+D + V++
Sbjct: 74 LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 89 LERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQI 148
+S H+ +VRC P +++ S+D IK+W+ C F + +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-QCVNNFSDSVGFANFV 192
Query: 149 VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADD 208
NP ASA D+TVKVW + + H GVNC+ ++ G+ YLI+ + D
Sbjct: 193 DFNPS-GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGN--YLITASSD 249
Query: 209 RLVKIWDYQNKTCVQTLE 226
+KI D + TL+
Sbjct: 250 GTLKILDLLEGRLIYTLQ 267
Score = 181 (68.8 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 44/163 (26%), Positives = 75/163 (46%)
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P + T S D + ++N+ R + + H D V V P L ++S D ++LW
Sbjct: 28 PNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLW 87
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+K + F+ HT V + + D A+AS D+++KVW + ++L H
Sbjct: 88 IPDKRGKFSE-FKAHTAPVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTH 145
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
V C + D ++S ++D+ +KIWD NK CV +
Sbjct: 146 WVRCAKF--SPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSV 186
Score = 181 (68.8 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 52/214 (24%), Positives = 92/214 (42%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++R + DL P + + ++ + +WN + + + V + +F
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P N + + S D V ++ + +F F+AH+ VR V FL T+S+D IK+W
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + ++ HTH+V +P D S S D+T+K+W +
Sbjct: 130 SMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQ-NK 219
N VD+ G + S D+ VK+WD + NK
Sbjct: 188 FANFVDFNPSGT--CIASAGSDQTVKVWDVRVNK 219
Score = 134 (52.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/191 (25%), Positives = 83/191 (43%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV---PRKNWIVT 74
V+C P +++ + + +W+ Q V +F D V A FV P I +
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS--D-SVGFANFVDFNPSGTCIAS 203
Query: 75 GSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWAC 134
D V V++ + ++ HS V C++ HP+ +L+T+S D +K+ + +
Sbjct: 204 AGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLI 263
Query: 135 QQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC--VD 192
+ +GHT V + + K FAS D V +W+ NF E H KG+ +
Sbjct: 264 YTL-QGHTGPVFTVSFS-KGGELFASGGADTQVLLWRT-----NFD-ELHCKGLTKRNLK 315
Query: 193 YYHGGDKPYLI 203
H P+L+
Sbjct: 316 RLHFDSPPHLL 326
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 199 (75.1 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 54/225 (24%), Positives = 97/225 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWN-HETNQNVKSFEVCDLPVRAAKFVPRK 69
L+ V CC HP + ++ ++ + +W+ + N + + V +
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVR-CVAVHPTQPFLLTSSDDMLIKLWNW 128
+ + + S D V V++ T ER + H+ +V C + T SDD +KLW+
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 129 EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
K A Q F+ +T+ V+ + N + S +D +KVW L +T+ GH V
Sbjct: 183 RKK-AAIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSV 239
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQ----NKTCVQTLESGI 229
+ G YL+S A D V++WD + + CV+ + +
Sbjct: 240 TGLSLSSEGS--YLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 282
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 202 (76.2 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 52/216 (24%), Positives = 91/216 (42%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
+ +D + + P+ + +S + V +W F+ VR+ F
Sbjct: 55 RFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDG 114
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+VT SDD V V+ + +S H+++VRC P + + DD ++LW+
Sbjct: 115 QRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWD-T 173
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ C +F + + N AS+ D T+K+W + + + H GVN
Sbjct: 174 SSHQCINIFTDYGGSATFVDFN-SSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVN 232
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
C ++ G+ YLISG+ D +KI D + TL
Sbjct: 233 CFSFHPSGN--YLISGSSDSTIKILDLLEGRLIYTL 266
Score = 168 (64.2 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 52/217 (23%), Positives = 86/217 (39%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++R D + C D +P + + + +WN F + F
Sbjct: 10 LERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFA 69
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P + + + S D V ++ + F+AH+ VR V L+T+SDD +K+W
Sbjct: 70 PSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVW 129
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
E+ + HT++V +P D AS DRTV++W S +
Sbjct: 130 GVERKKFLYSL-NRHTNWVRCARFSP-DGRLIASCGDDRTVRLWDTSSHQCINIFTDYGG 187
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
VD+ G SGAD+ +KIWD + +Q
Sbjct: 188 SATFVDFNSSGTC-IASSGADNT-IKIWDIRTNKLIQ 222
Score = 124 (48.7 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 40/181 (22%), Positives = 78/181 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
L ++ V+C P + ++AS + V +W+ ++Q + F F
Sbjct: 140 LNRHTNWVRCARFSP-DGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSG 198
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
I + D + +++ T + ++ H+ V C + HP+ +L++ S D IK+ +
Sbjct: 199 TCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLL 258
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT--LEGHEKG 187
+ + GH V+ + + +D + FAS D V +W+ S N+ L H K
Sbjct: 259 EGRLIYTL-HGHKGPVLTVTFS-RDGDLFASGGADSQVLMWKTNFDSLNYRELLSKHSKR 316
Query: 188 V 188
V
Sbjct: 317 V 317
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 45/176 (25%), Positives = 72/176 (40%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
V VW E + + S VR A+F P I + DD V +++ ++ + + F +
Sbjct: 126 VKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDY 185
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
V + + + +S D IK+W+ Q ++ H V +P N
Sbjct: 186 GGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQH-YKVHNAGVNCFSFHPS-GNYL 243
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
S S D T+K+ L +TL GH+ V V + GD SG D V +W
Sbjct: 244 ISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGD--LFASGGADSQVLMW 297
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 200 (75.5 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 53/198 (26%), Positives = 86/198 (43%)
Query: 30 MLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT 88
+LAS V +W + F+ PVR+ F ++ T S+D + V++
Sbjct: 74 LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 89 LERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQI 148
+S H+ +VRC P +++ S+D IK+W+ C F + +
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-QCVNNFSDSVGFANFV 192
Query: 149 VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADD 208
NP ASA D+TVKVW + + H GVNC+ + H D YL++ + D
Sbjct: 193 DFNPS-GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISF-HPSDN-YLVTASSD 249
Query: 209 RLVKIWDYQNKTCVQTLE 226
+KI D + TL+
Sbjct: 250 GTLKILDLLEGRLIYTLQ 267
Score = 181 (68.8 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 44/163 (26%), Positives = 75/163 (46%)
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P + T S D + ++N+ R + + H D V V P L ++S D ++LW
Sbjct: 28 PNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLW 87
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+K + F+ HT V + + D A+AS D+++KVW + ++L H
Sbjct: 88 IPDKRGKFSE-FKAHTAPVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTH 145
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
V C + D ++S ++D+ +KIWD NK CV +
Sbjct: 146 WVRCAKF--SPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSV 186
Score = 181 (68.8 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 52/214 (24%), Positives = 92/214 (42%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++R + DL P + + ++ + +WN + + + V + +F
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P N + + S D V ++ + +F F+AH+ VR V FL T+S+D IK+W
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + ++ HTH+V +P D S S D+T+K+W +
Sbjct: 130 SMYRQRFLYSLYR-HTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQ-NK 219
N VD+ G + S D+ VK+WD + NK
Sbjct: 188 FANFVDFNPSGT--CIASAGSDQTVKVWDVRVNK 219
Score = 141 (54.7 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 49/191 (25%), Positives = 84/191 (43%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV---PRKNWIVT 74
V+C P +++ + + +W+ Q V +F D V A FV P I +
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS--D-SVGFANFVDFNPSGTCIAS 203
Query: 75 GSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWAC 134
D V V++ + ++ HS V C++ HP+ +L+T+S D +K+ + +
Sbjct: 204 AGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLI 263
Query: 135 QQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC--VD 192
+ +GHT V + + K FAS D V +W+ NF E H KG+N +
Sbjct: 264 YTL-QGHTGPVFTVSFS-KGGELFASGGADTQVLLWRT-----NFD-ELHCKGLNKRNLK 315
Query: 193 YYHGGDKPYLI 203
H P+L+
Sbjct: 316 RLHFDSPPHLL 326
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 193 (73.0 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 51/188 (27%), Positives = 91/188 (48%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
+W+ + + +K+ + V F P+ N IV+GS D V +++ T + + AHSD
Sbjct: 87 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD 146
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
V V + +++SS D L ++W+ + + + V + +P A
Sbjct: 147 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA- 205
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCV--DYYHGGDKPYLISGADDRLVKIWDYQN 218
A+LD T+K+W T GH+ C+ ++ G K +++SG++D LV IW+ Q
Sbjct: 206 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQT 264
Query: 219 KTCVQTLE 226
K VQ L+
Sbjct: 265 KEIVQKLQ 272
Score = 187 (70.9 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 47/219 (21%), Positives = 96/219 (43%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+K L + V P W+ +S + + +W + K+ L + +
Sbjct: 11 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 70
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
N +V+ SDD + +++ ++ + + + HS+YV C +P +++ S D +++W
Sbjct: 71 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 130
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL-EGHE 185
+ K C + H+ V + N +D + S+S D ++W S TL +
Sbjct: 131 D-VKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 188
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
V+ V + G Y+++ D +K+WDY C++T
Sbjct: 189 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKT 225
Score = 158 (60.7 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 42/169 (24%), Positives = 87/169 (51%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLP-VRAAKFVP 67
+ L A SD V + +++S Y+G +W+ + Q +K+ D P V KF P
Sbjct: 139 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 198
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP---FLLTSSDDMLIK 124
+I+ + D + +++Y+ + ++ H + C+ + + ++++ S+D L+
Sbjct: 199 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 258
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASL--DRTVKVWQ 171
+WN + Q++ +GHT V+ +P +N ASA+L D+T+K+W+
Sbjct: 259 IWNLQTKEIVQKL-QGHTDVVISTACHPTEN-IIASAALENDKTIKLWK 305
Score = 141 (54.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 29/95 (30%), Positives = 51/95 (53%)
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+A + GHT V + +P + AS+S D+ +K+W T+ GH+ G++ V
Sbjct: 9 YALKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 67
Query: 192 DYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ D L+S +DD+ +KIWD + C++TL+
Sbjct: 68 AW--SSDSNLLVSASDDKTLKIWDVSSGKCLKTLK 100
Score = 138 (53.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 47/211 (22%), Positives = 93/211 (44%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
+ L S+ V CC+ +P +++ ++ V +W+ +T + +K+ PV A F
Sbjct: 97 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 156
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSF-EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
+ IV+ S D +++ + + + + + V V P ++L ++ D +KLW+
Sbjct: 157 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 216
Query: 128 WEKAWACQQVFEGHTH--YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
+ K C + + GH + Y + + S S D V +W L + L+GH
Sbjct: 217 YSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 275
Query: 186 KGVNCVDYYHGGDKPYLISGA--DDRLVKIW 214
V H + + S A +D+ +K+W
Sbjct: 276 DVVISTAC-HPTEN-IIASAALENDKTIKLW 304
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 198 (74.8 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 45/134 (33%), Positives = 67/134 (50%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
H+ E HSD+V VA P L + S + IKLW+ + GH+++V+ +V +P
Sbjct: 149 HTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD-SATCGLKHTLGGHSNWVLPLVFSP 207
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
D AS S D T+K+W S S TLEGH + + + G L SG+ D +K
Sbjct: 208 -DGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQ--LLASGSSDATIK 264
Query: 213 IWDYQNKTCVQTLE 226
+WD + TL+
Sbjct: 265 LWDTATGSFRHTLK 278
Score = 188 (71.2 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 57/217 (26%), Positives = 96/217 (44%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGH-VHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
L SD ++ P + +LAS N + +W+ + ++ E V++ F P
Sbjct: 37 LEGHSDWIETVTFSP-DGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG 95
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+ +GS D + ++N + H+ E HSD V VA P +LWN
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG------------QLWN-P 142
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ + EGH+ +V+ + +P D AS S ++T+K+W + TL GH V
Sbjct: 143 AIGSLKHTIEGHSDWVLSVAFSP-DGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWV- 200
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ D L SG++D +K+WD + + TLE
Sbjct: 201 -LPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLE 236
Score = 184 (69.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 55/209 (26%), Positives = 92/209 (44%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+K + SDRV+ P NG + WN + E V + F
Sbjct: 117 LKHTMEGHSDRVESVAFSP----------NGQL--WNPAIGSLKHTIEGHSDWVLSVAFS 164
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P + +GS + + +++ T H+ HS++V + P L + S+D IKLW
Sbjct: 165 PDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLW 224
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + + + EGH++ + + +P + AS S D T+K+W + S TL+GH
Sbjct: 225 D-PPSGSLKHTLEGHSNKIESLAFSP-NGQLLASGSSDATIKLWDTATGSFRHTLKGHSD 282
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
V V + D L SG+ D +K+WD
Sbjct: 283 MVLSVVF--SPDSQLLESGSGDNTIKLWD 309
Score = 159 (61.0 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 35/104 (33%), Positives = 51/104 (49%)
Query: 94 SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPK 153
+ E HSD++ V P L + S+D IKLW+ + +Q EGH+ V + +P
Sbjct: 36 TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWD-PASGGLKQTLEGHSSSVQSVAFSP- 93
Query: 154 DNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGG 197
+ AS S D T+K+W S S T+EGH V V + G
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG 137
Score = 143 (55.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 32/99 (32%), Positives = 48/99 (48%)
Query: 129 EKAWACQ-QVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
E W + Q EGH+ ++ + +P D AS S D T+K+W S TLEGH
Sbjct: 27 EDNWGPELQTLEGHSDWIETVTFSP-DGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSS 85
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
V V + G L SG+ D +K+W+ + + T+E
Sbjct: 86 VQSVAFSPNGQ--LLASGSSDTTIKLWNSASDSLKHTME 122
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 199 (75.1 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 50/177 (28%), Positives = 88/177 (49%)
Query: 57 DLPVRAAKFVPR-KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLL 115
D + +A+F P + +VTGS D +++ +T + + H+++V CVA P +
Sbjct: 134 DGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIA 193
Query: 116 TSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP----KDNNTF--ASASLDRTVKV 169
T S D I+ W+ +K HT +M + P D+ + AS S D TV++
Sbjct: 194 TGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRI 253
Query: 170 WQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
W + + FTL GH + CV + GG ++ S + D+ ++IWD ++ C+ L+
Sbjct: 254 WNVKLRTLLFTLSGHTAPITCVRW--GGQN-WIYSSSYDKTIRIWDAKDGKCLHILK 307
Score = 160 (61.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 72 IVTGSDDMQVCVFN-YNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+V+ SDD+Q+ +++ + + H V + P + T+S D ++LW+ K
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDG-K 419
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
GH V Q + D+ S+S D T+KVW + S F L GHE V
Sbjct: 420 TGKFLATLRGHVAAVYQCAWST-DSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFA 478
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDY 216
VD+ G + + SG D+ V+IW +
Sbjct: 479 VDWSPDGQR--VASGGADKAVRIWSH 502
Score = 125 (49.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 114 LLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLG 173
L+++SDD+ + LW+ +K+ GH V +P D A+AS D +V++W
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSP-DGRCIATASFDSSVRLWDGK 419
Query: 174 SASPNFTLEGHEKGV-NCVDYYHGGDKPYLISGADDRLVKIWDYQNK 219
+ TL GH V C D L+S + D +K+WD ++K
Sbjct: 420 TGKFLATLRGHVAAVYQCA---WSTDSRLLVSSSQDTTLKVWDVRSK 463
Score = 36 (17.7 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 4/15 (26%), Positives = 10/15 (66%)
Query: 29 WMLASLYNGHVHVWN 43
W+ +S Y+ + +W+
Sbjct: 282 WIYSSSYDKTIRIWD 296
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 194 (73.4 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 53/218 (24%), Positives = 97/218 (44%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + VW+ T V + + V
Sbjct: 42 RVQMRTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLER----FHSFEAHSDYVRCVAVHPTQPFLLTS 117
+ P N++ G D +++ + E AH+ Y+ C ++TS
Sbjct: 102 TCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN-IVTS 160
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
S D LW+ E + VF GHT M + ++P D F S + D + K+W + +
Sbjct: 161 SGDTTCALWDIETGQQ-KTVFVGHTGDCMSLAVSP-DYKLFISGACDASAKLWDVREGTC 218
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ + +G+DD +++D
Sbjct: 219 RQTFTGHESDINAICFFPNGEA--ICTGSDDASCRLFD 254
Score = 131 (51.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 39/156 (25%), Positives = 67/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ V++ T + H+ S +V A P+ F+ D + +++ +
Sbjct: 70 LVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V HT Y+ D+N ++S D T +W + + GH G
Sbjct: 130 EGNVKVSRELSAHTGYLS--CCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHT-G- 185
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+C+ D ISGA D K+WD + TC QT
Sbjct: 186 DCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQT 221
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 193 (73.0 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 58/226 (25%), Positives = 105/226 (46%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R+LT S V+ L + L+ ++G + +W+ + + F V + F
Sbjct: 56 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSL 115
Query: 68 RKNWIVTGSDDMQVCVFNYNTL-ERFHSF----EAHSDYVRCVAVHPT--QPFLLTSSDD 120
IV+ S D + + +NTL E ++ E H D+V CV P QP ++++S D
Sbjct: 116 DNRQIVSASRDRTIKL--WNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD 173
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
+K+WN + GHT YV + ++P D + AS D V +W L ++
Sbjct: 174 KTVKVWNLSNC-KLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLYS 231
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
LE + ++ + + Y + A + +KIWD ++K+ V+ L+
Sbjct: 232 LEANSV-IHALCF---SPNRYWLCAATEHGIKIWDLESKSIVEDLK 273
Score = 147 (56.8 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 47/158 (29%), Positives = 72/158 (45%)
Query: 73 VTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW--EK 130
++GS D ++ +++ F H+ V VA ++++S D IKLWN E
Sbjct: 79 LSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC 138
Query: 131 AWACQQVFEGHTHYVMQIVINPKD-NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ + EGH +V + +P T SAS D+TVKVW L + TL GH V+
Sbjct: 139 KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVS 198
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
V G SG D +V +WD + +LE+
Sbjct: 199 TVAVSPDGS--LCASGGKDGVVLLWDLAEGKKLYSLEA 234
Score = 139 (54.0 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 38/140 (27%), Positives = 66/140 (47%)
Query: 94 SFEAHSDYVRCVAVH-PTQPFLLTSSDDMLIKLWNW---EKAWA-CQQVFEGHTHYVMQI 148
+ AH+D V +A ++++S D I LW +KA+ Q+ GH+H+V +
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDV 69
Query: 149 VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADD 208
V++ D S S D +++W L + GH K V V + D ++S + D
Sbjct: 70 VLS-SDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAF--SLDNRQIVSASRD 126
Query: 209 RLVKIWDYQNKTCVQTLESG 228
R +K+W+ + C T+ G
Sbjct: 127 RTIKLWNTLGE-CKYTISEG 145
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 193 (73.0 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 51/188 (27%), Positives = 91/188 (48%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
+W+ + + +K+ + V F P+ N IV+GS D V +++ T + + AHSD
Sbjct: 113 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD 172
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
V V + +++SS D L ++W+ + + + V + +P A
Sbjct: 173 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA- 231
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCV--DYYHGGDKPYLISGADDRLVKIWDYQN 218
A+LD T+K+W T GH+ C+ ++ G K +++SG++D LV IW+ Q
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQT 290
Query: 219 KTCVQTLE 226
K VQ L+
Sbjct: 291 KEIVQKLQ 298
Score = 187 (70.9 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 47/219 (21%), Positives = 96/219 (43%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+K L + V P W+ +S + + +W + K+ L + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
N +V+ SDD + +++ ++ + + + HS+YV C +P +++ S D +++W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL-EGHE 185
+ K C + H+ V + N +D + S+S D ++W S TL +
Sbjct: 157 D-VKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
V+ V + G Y+++ D +K+WDY C++T
Sbjct: 215 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKT 251
Score = 158 (60.7 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 42/169 (24%), Positives = 87/169 (51%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLP-VRAAKFVP 67
+ L A SD V + +++S Y+G +W+ + Q +K+ D P V KF P
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 224
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP---FLLTSSDDMLIK 124
+I+ + D + +++Y+ + ++ H + C+ + + ++++ S+D L+
Sbjct: 225 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASL--DRTVKVWQ 171
+WN + Q++ +GHT V+ +P +N ASA+L D+T+K+W+
Sbjct: 285 IWNLQTKEIVQKL-QGHTDVVISTACHPTEN-IIASAALENDKTIKLWK 331
Score = 141 (54.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 29/95 (30%), Positives = 51/95 (53%)
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+A + GHT V + +P + AS+S D+ +K+W T+ GH+ G++ V
Sbjct: 35 YALKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 192 DYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ D L+S +DD+ +KIWD + C++TL+
Sbjct: 94 AW--SSDSNLLVSASDDKTLKIWDVSSGKCLKTLK 126
Score = 138 (53.6 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 47/211 (22%), Positives = 93/211 (44%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
+ L S+ V CC+ +P +++ ++ V +W+ +T + +K+ PV A F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 182
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSF-EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
+ IV+ S D +++ + + + + + V V P ++L ++ D +KLW+
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Query: 128 WEKAWACQQVFEGHTH--YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
+ K C + + GH + Y + + S S D V +W L + L+GH
Sbjct: 243 YSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 301
Query: 186 KGVNCVDYYHGGDKPYLISGA--DDRLVKIW 214
V H + + S A +D+ +K+W
Sbjct: 302 DVVISTAC-HPTEN-IIASAALENDKTIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 193 (73.0 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 51/188 (27%), Positives = 91/188 (48%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
+W+ + + +K+ + V F P+ N IV+GS D V +++ T + + AHSD
Sbjct: 113 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD 172
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
V V + +++SS D L ++W+ + + + V + +P A
Sbjct: 173 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA- 231
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCV--DYYHGGDKPYLISGADDRLVKIWDYQN 218
A+LD T+K+W T GH+ C+ ++ G K +++SG++D LV IW+ Q
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQT 290
Query: 219 KTCVQTLE 226
K VQ L+
Sbjct: 291 KEIVQKLQ 298
Score = 187 (70.9 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 47/219 (21%), Positives = 96/219 (43%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+K L + V P W+ +S + + +W + K+ L + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
N +V+ SDD + +++ ++ + + + HS+YV C +P +++ S D +++W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL-EGHE 185
+ K C + H+ V + N +D + S+S D ++W S TL +
Sbjct: 157 D-VKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
V+ V + G Y+++ D +K+WDY C++T
Sbjct: 215 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKT 251
Score = 158 (60.7 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 42/169 (24%), Positives = 87/169 (51%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLP-VRAAKFVP 67
+ L A SD V + +++S Y+G +W+ + Q +K+ D P V KF P
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 224
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP---FLLTSSDDMLIK 124
+I+ + D + +++Y+ + ++ H + C+ + + ++++ S+D L+
Sbjct: 225 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASL--DRTVKVWQ 171
+WN + Q++ +GHT V+ +P +N ASA+L D+T+K+W+
Sbjct: 285 IWNLQTKEIVQKL-QGHTDVVISTACHPTEN-IIASAALENDKTIKLWK 331
Score = 141 (54.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 29/95 (30%), Positives = 51/95 (53%)
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+A + GHT V + +P + AS+S D+ +K+W T+ GH+ G++ V
Sbjct: 35 YALKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 192 DYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ D L+S +DD+ +KIWD + C++TL+
Sbjct: 94 AW--SSDSNLLVSASDDKTLKIWDVSSGKCLKTLK 126
Score = 138 (53.6 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 47/211 (22%), Positives = 93/211 (44%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
+ L S+ V CC+ +P +++ ++ V +W+ +T + +K+ PV A F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 182
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSF-EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
+ IV+ S D +++ + + + + + V V P ++L ++ D +KLW+
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Query: 128 WEKAWACQQVFEGHTH--YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
+ K C + + GH + Y + + S S D V +W L + L+GH
Sbjct: 243 YSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 301
Query: 186 KGVNCVDYYHGGDKPYLISGA--DDRLVKIW 214
V H + + S A +D+ +K+W
Sbjct: 302 DVVISTAC-HPTEN-IIASAALENDKTIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 193 (73.0 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 51/188 (27%), Positives = 91/188 (48%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
+W+ + + +K+ + V F P+ N IV+GS D V +++ T + + AHSD
Sbjct: 113 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD 172
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
V V + +++SS D L ++W+ + + + V + +P A
Sbjct: 173 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA- 231
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCV--DYYHGGDKPYLISGADDRLVKIWDYQN 218
A+LD T+K+W T GH+ C+ ++ G K +++SG++D LV IW+ Q
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQT 290
Query: 219 KTCVQTLE 226
K VQ L+
Sbjct: 291 KEIVQKLQ 298
Score = 187 (70.9 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 47/219 (21%), Positives = 96/219 (43%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+K L + V P W+ +S + + +W + K+ L + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
N +V+ SDD + +++ ++ + + + HS+YV C +P +++ S D +++W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL-EGHE 185
+ K C + H+ V + N +D + S+S D ++W S TL +
Sbjct: 157 D-VKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
V+ V + G Y+++ D +K+WDY C++T
Sbjct: 215 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKT 251
Score = 158 (60.7 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 42/169 (24%), Positives = 87/169 (51%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLP-VRAAKFVP 67
+ L A SD V + +++S Y+G +W+ + Q +K+ D P V KF P
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 224
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP---FLLTSSDDMLIK 124
+I+ + D + +++Y+ + ++ H + C+ + + ++++ S+D L+
Sbjct: 225 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASL--DRTVKVWQ 171
+WN + Q++ +GHT V+ +P +N ASA+L D+T+K+W+
Sbjct: 285 IWNLQTKEIVQKL-QGHTDVVISTACHPTEN-IIASAALENDKTIKLWK 331
Score = 141 (54.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 29/95 (30%), Positives = 51/95 (53%)
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+A + GHT V + +P + AS+S D+ +K+W T+ GH+ G++ V
Sbjct: 35 YALKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 192 DYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ D L+S +DD+ +KIWD + C++TL+
Sbjct: 94 AW--SSDSNLLVSASDDKTLKIWDVSSGKCLKTLK 126
Score = 138 (53.6 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 47/211 (22%), Positives = 93/211 (44%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
+ L S+ V CC+ +P +++ ++ V +W+ +T + +K+ PV A F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 182
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSF-EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
+ IV+ S D +++ + + + + + V V P ++L ++ D +KLW+
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Query: 128 WEKAWACQQVFEGHTH--YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
+ K C + + GH + Y + + S S D V +W L + L+GH
Sbjct: 243 YSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 301
Query: 186 KGVNCVDYYHGGDKPYLISGA--DDRLVKIW 214
V H + + S A +D+ +K+W
Sbjct: 302 DVVISTAC-HPTEN-IIASAALENDKTIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 193 (73.0 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 51/188 (27%), Positives = 91/188 (48%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
+W+ + + +K+ + V F P+ N IV+GS D V +++ T + + AHSD
Sbjct: 113 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD 172
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
V V + +++SS D L ++W+ + + + V + +P A
Sbjct: 173 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA- 231
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCV--DYYHGGDKPYLISGADDRLVKIWDYQN 218
A+LD T+K+W T GH+ C+ ++ G K +++SG++D LV IW+ Q
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQT 290
Query: 219 KTCVQTLE 226
K VQ L+
Sbjct: 291 KEIVQKLQ 298
Score = 187 (70.9 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 47/219 (21%), Positives = 96/219 (43%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+K L + V P W+ +S + + +W + K+ L + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
N +V+ SDD + +++ ++ + + + HS+YV C +P +++ S D +++W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL-EGHE 185
+ K C + H+ V + N +D + S+S D ++W S TL +
Sbjct: 157 D-VKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
V+ V + G Y+++ D +K+WDY C++T
Sbjct: 215 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKT 251
Score = 158 (60.7 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 42/169 (24%), Positives = 87/169 (51%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLP-VRAAKFVP 67
+ L A SD V + +++S Y+G +W+ + Q +K+ D P V KF P
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 224
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP---FLLTSSDDMLIK 124
+I+ + D + +++Y+ + ++ H + C+ + + ++++ S+D L+
Sbjct: 225 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASL--DRTVKVWQ 171
+WN + Q++ +GHT V+ +P +N ASA+L D+T+K+W+
Sbjct: 285 IWNLQTKEIVQKL-QGHTDVVISTACHPTEN-IIASAALENDKTIKLWK 331
Score = 141 (54.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 29/95 (30%), Positives = 51/95 (53%)
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+A + GHT V + +P + AS+S D+ +K+W T+ GH+ G++ V
Sbjct: 35 YALKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 192 DYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ D L+S +DD+ +KIWD + C++TL+
Sbjct: 94 AW--SSDSNLLVSASDDKTLKIWDVSSGKCLKTLK 126
Score = 138 (53.6 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 47/211 (22%), Positives = 93/211 (44%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
+ L S+ V CC+ +P +++ ++ V +W+ +T + +K+ PV A F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 182
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSF-EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
+ IV+ S D +++ + + + + + V V P ++L ++ D +KLW+
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Query: 128 WEKAWACQQVFEGHTH--YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
+ K C + + GH + Y + + S S D V +W L + L+GH
Sbjct: 243 YSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 301
Query: 186 KGVNCVDYYHGGDKPYLISGA--DDRLVKIW 214
V H + + S A +D+ +K+W
Sbjct: 302 DVVISTAC-HPTEN-IIASAALENDKTIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 193 (73.0 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 51/188 (27%), Positives = 91/188 (48%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
+W+ + + +K+ + V F P+ N IV+GS D V +++ T + + AHSD
Sbjct: 113 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD 172
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
V V + +++SS D L ++W+ + + + V + +P A
Sbjct: 173 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA- 231
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCV--DYYHGGDKPYLISGADDRLVKIWDYQN 218
A+LD T+K+W T GH+ C+ ++ G K +++SG++D LV IW+ Q
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQT 290
Query: 219 KTCVQTLE 226
K VQ L+
Sbjct: 291 KEIVQKLQ 298
Score = 187 (70.9 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 47/219 (21%), Positives = 96/219 (43%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+K L + V P W+ +S + + +W + K+ L + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
N +V+ SDD + +++ ++ + + + HS+YV C +P +++ S D +++W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL-EGHE 185
+ K C + H+ V + N +D + S+S D ++W S TL +
Sbjct: 157 D-VKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
V+ V + G Y+++ D +K+WDY C++T
Sbjct: 215 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKT 251
Score = 158 (60.7 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 42/169 (24%), Positives = 87/169 (51%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLP-VRAAKFVP 67
+ L A SD V + +++S Y+G +W+ + Q +K+ D P V KF P
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 224
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP---FLLTSSDDMLIK 124
+I+ + D + +++Y+ + ++ H + C+ + + ++++ S+D L+
Sbjct: 225 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASL--DRTVKVWQ 171
+WN + Q++ +GHT V+ +P +N ASA+L D+T+K+W+
Sbjct: 285 IWNLQTKEIVQKL-QGHTDVVISTACHPTEN-IIASAALENDKTIKLWK 331
Score = 141 (54.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 29/95 (30%), Positives = 51/95 (53%)
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+A + GHT V + +P + AS+S D+ +K+W T+ GH+ G++ V
Sbjct: 35 YALKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 192 DYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ D L+S +DD+ +KIWD + C++TL+
Sbjct: 94 AW--SSDSNLLVSASDDKTLKIWDVSSGKCLKTLK 126
Score = 138 (53.6 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 47/211 (22%), Positives = 93/211 (44%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
+ L S+ V CC+ +P +++ ++ V +W+ +T + +K+ PV A F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 182
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSF-EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
+ IV+ S D +++ + + + + + V V P ++L ++ D +KLW+
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Query: 128 WEKAWACQQVFEGHTH--YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
+ K C + + GH + Y + + S S D V +W L + L+GH
Sbjct: 243 YSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHT 301
Query: 186 KGVNCVDYYHGGDKPYLISGA--DDRLVKIW 214
V H + + S A +D+ +K+W
Sbjct: 302 DVVISTAC-HPTEN-IIASAALENDKTIKLW 330
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 192 (72.6 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 54/215 (25%), Positives = 91/215 (42%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L D V C P+ + + + V +W F+ VR+ F
Sbjct: 58 LVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQ 117
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+VT SDD + V+ + + S H ++VRC P + ++SDD +KLW+ +
Sbjct: 118 SLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWD-KT 176
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
+ C F H + + +P A+A D+TVKVW + + H VN
Sbjct: 177 SRECIHSFCEHGGFANHVEFHPS-GTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNS 235
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
+ ++ G+ YLI+ ++D +KI D + TL
Sbjct: 236 LSFHPSGN--YLITASNDSTLKILDLLEGRLLYTL 268
Score = 185 (70.2 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 46/155 (29%), Positives = 71/155 (45%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
VR A+F P I + SDD V +++ + E HSF H + V HP+ + +
Sbjct: 149 VRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGT 208
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D +K+W+ Q ++ HT V + +P N +AS D T+K+ L +
Sbjct: 209 DKTVKVWDVRMNRLLQH-YQVHTAAVNSLSFHPS-GNYLITASNDSTLKILDLLEGRLLY 266
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
TL GH+ CV + GD + SG D V +W
Sbjct: 267 TLHGHQGPATCVAFSRTGD--FFASGGSDEQVMVW 299
Score = 161 (61.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 50/217 (23%), Positives = 91/217 (41%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++R D + D + + + + + +W+ + V +F
Sbjct: 12 LERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFS 71
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P + + +GS D VC++ + F+AH+ VR V L+T+SDD IK+W
Sbjct: 72 PSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVW 131
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + + H ++V +P D ASAS D+TVK+W S + H
Sbjct: 132 TVHRQKFLFSLSQ-HINWVRCARFSP-DGRLIASASDDKTVKLWDKTSRECIHSFCEHGG 189
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
N V+++ G + + D+ VK+WD + +Q
Sbjct: 190 FANHVEFHPSGT--CIAAAGTDKTVKVWDVRMNRLLQ 224
Score = 121 (47.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 36/142 (25%), Positives = 62/142 (43%)
Query: 88 TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQ 147
+LER H F H D + V + L + S D +K+W+ + + GH VM
Sbjct: 11 SLER-H-FRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLV-GHKDAVMC 67
Query: 148 IVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGAD 207
+ +P + AS S D+TV +W + + H V V + G L++ +D
Sbjct: 68 VQFSPS-GHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQS--LVTASD 124
Query: 208 DRLVKIWDYQNKTCVQTLESGI 229
D+ +K+W + + +L I
Sbjct: 125 DKTIKVWTVHRQKFLFSLSQHI 146
Score = 110 (43.8 bits), Expect = 0.00066, P = 0.00066
Identities = 36/174 (20%), Positives = 75/174 (43%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRA--AKFVPRKNWIVTG 75
V+C P + ++ + V +W+ + + + SF C+ A +F P I
Sbjct: 149 VRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSF--CEHGGFANHVEFHPSGTCIAAA 206
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQ 135
D V V++ ++ H+ V ++ HP+ +L+T+S+D +K+ + +
Sbjct: 207 GTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEG-RLL 265
Query: 136 QVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF--TLEGHEKG 187
GH + + + + FAS D V VW+ ++ ++ L+ H+ G
Sbjct: 266 YTLHGHQGPATCVAFS-RTGDFFASGGSDEQVMVWKTNFSAADYDGVLKTHKSG 318
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 193 (73.0 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 53/218 (24%), Positives = 97/218 (44%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + VW+ T V + + V
Sbjct: 42 RVQMRTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLER----FHSFEAHSDYVRCVAVHPTQPFLLTS 117
+ P N++ G D +++ + E AH+ Y+ C ++TS
Sbjct: 102 TCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN-IVTS 160
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
S D LW+ E + VF GHT M + ++P D F S + D + K+W + +
Sbjct: 161 SGDTTCALWDIETGQQ-KTVFVGHTGDCMSLAVSP-DFKLFISGACDASAKLWDVREGTC 218
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ + +G+DD +++D
Sbjct: 219 RQTFTGHESDINAICFFPNGEA--ICTGSDDASCRLFD 254
Score = 130 (50.8 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 39/156 (25%), Positives = 67/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ V++ T + H+ S +V A P+ F+ D + +++ +
Sbjct: 70 LVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V HT Y+ D+N ++S D T +W + + GH G
Sbjct: 130 EGNVKVSRELSAHTGYLS--CCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHT-G- 185
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+C+ D ISGA D K+WD + TC QT
Sbjct: 186 DCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQT 221
Score = 126 (49.4 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 55/222 (24%), Positives = 93/222 (41%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQ-NVK-SFEVCDLP--VRAAKFVPRK 69
RS V C P+ ++ + +++ ++ + NVK S E+ + +F+
Sbjct: 96 RSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDN 155
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
N IVT S D +++ T ++ F H+ +AV P ++ + D KLW+
Sbjct: 156 N-IVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVR 214
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK--- 186
+ C+Q F GH + I P + + S D + +++ L A T HE
Sbjct: 215 EG-TCRQTFTGHESDINAICFFP-NGEAICTGSDDASCRLFDL-RADQELTTYSHESIIC 271
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
G+ V + G L +G DD +WD V TL SG
Sbjct: 272 GITSVAFSLSGR--LLFAGYDDFNCNVWDSMKCERVGTL-SG 310
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 193 (73.0 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 53/218 (24%), Positives = 97/218 (44%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + VW+ T V + + V
Sbjct: 42 RVQMRTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLER----FHSFEAHSDYVRCVAVHPTQPFLLTS 117
+ P N++ G D +++ + E AH+ Y+ C ++TS
Sbjct: 102 TCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN-IVTS 160
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
S D LW+ E + VF GHT M + ++P D F S + D + K+W + +
Sbjct: 161 SGDTTCALWDIETGQQ-KTVFVGHTGDCMSLAVSP-DFKLFISGACDASAKLWDVREGTC 218
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ + +G+DD +++D
Sbjct: 219 RQTFTGHESDINAICFFPNGEA--ICTGSDDASCRLFD 254
Score = 130 (50.8 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 39/156 (25%), Positives = 67/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ V++ T + H+ S +V A P+ F+ D + +++ +
Sbjct: 70 LVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V HT Y+ D+N ++S D T +W + + GH G
Sbjct: 130 EGNVKVSRELSAHTGYLS--CCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHT-G- 185
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+C+ D ISGA D K+WD + TC QT
Sbjct: 186 DCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQT 221
Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
Identities = 50/209 (23%), Positives = 87/209 (41%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQ-NVK-SFEVCDLP--VRAAKFVPRK 69
RS V C P+ ++ + +++ ++ + NVK S E+ + +F+
Sbjct: 96 RSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDN 155
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
N IVT S D +++ T ++ F H+ +AV P ++ + D KLW+
Sbjct: 156 N-IVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVR 214
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK--- 186
+ C+Q F GH + I P + + S D + +++ L A T E
Sbjct: 215 EG-TCRQTFTGHESDINAICFFP-NGEAICTGSDDASCRLFDL-RADQELTAYSDESIIC 271
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
G+ V + G L +G DD IWD
Sbjct: 272 GITSVAFSLSGR--LLFAGYDDFNCNIWD 298
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 193 (73.0 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 53/218 (24%), Positives = 97/218 (44%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + VW+ T V + + V
Sbjct: 42 RVQMRTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLER----FHSFEAHSDYVRCVAVHPTQPFLLTS 117
+ P N++ G D +++ + E AH+ Y+ C ++TS
Sbjct: 102 TCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN-IVTS 160
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
S D LW+ E + VF GHT M + ++P D F S + D + K+W + +
Sbjct: 161 SGDTTCALWDIETGQQ-KTVFVGHTGDCMSLAVSP-DFKLFISGACDASAKLWDVREGTC 218
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ + +G+DD +++D
Sbjct: 219 RQTFTGHESDINAICFFPNGEA--ICTGSDDASCRLFD 254
Score = 130 (50.8 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 39/156 (25%), Positives = 67/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ V++ T + H+ S +V A P+ F+ D + +++ +
Sbjct: 70 LVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V HT Y+ D+N ++S D T +W + + GH G
Sbjct: 130 EGNVKVSRELSAHTGYLS--CCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHT-G- 185
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+C+ D ISGA D K+WD + TC QT
Sbjct: 186 DCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQT 221
Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
Identities = 50/209 (23%), Positives = 87/209 (41%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQ-NVK-SFEVCDLP--VRAAKFVPRK 69
RS V C P+ ++ + +++ ++ + NVK S E+ + +F+
Sbjct: 96 RSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDN 155
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
N IVT S D +++ T ++ F H+ +AV P ++ + D KLW+
Sbjct: 156 N-IVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVR 214
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK--- 186
+ C+Q F GH + I P + + S D + +++ L A T E
Sbjct: 215 EG-TCRQTFTGHESDINAICFFP-NGEAICTGSDDASCRLFDL-RADQELTAYSDESIIC 271
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
G+ V + G L +G DD IWD
Sbjct: 272 GITSVAFSLSGR--LLFAGYDDFNCNIWD 298
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 193 (73.0 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 53/218 (24%), Positives = 97/218 (44%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + VW+ T V + + V
Sbjct: 42 RVQMRTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLER----FHSFEAHSDYVRCVAVHPTQPFLLTS 117
+ P N++ G D +++ + E AH+ Y+ C ++TS
Sbjct: 102 TCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN-IVTS 160
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
S D LW+ E + VF GHT M + ++P D F S + D + K+W + +
Sbjct: 161 SGDTTCALWDIETGQQ-KTVFVGHTGDCMSLAVSP-DFRLFISGACDASAKLWDVREGTC 218
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ + +G+DD +++D
Sbjct: 219 RQTFTGHESDINAICFFPNGEA--ICTGSDDASCRLFD 254
Score = 129 (50.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 39/156 (25%), Positives = 67/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ V++ T + H+ S +V A P+ F+ D + +++ +
Sbjct: 70 LVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V HT Y+ D+N ++S D T +W + + GH G
Sbjct: 130 EGNVKVSRELSAHTGYLS--CCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHT-G- 185
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+C+ D ISGA D K+WD + TC QT
Sbjct: 186 DCMSLAVSPDFRLFISGACDASAKLWDVREGTCRQT 221
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 199 (75.1 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 59/220 (26%), Positives = 100/220 (45%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNG-HVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+++ A S V L + +LA+ + V+VW+ V S P+ + +
Sbjct: 14 QEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISA 73
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
++ IV GS + V++ + + H + + HP F+ + S D IKLW+
Sbjct: 74 KEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWD 133
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
+ C ++ HT V + +P D ASA+ D TVK+W L + F GH
Sbjct: 134 VRRK-GCIFKYKSHTQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGP 191
Query: 188 VNCVDYYHGGDKPYLI-SGADDRLVKIWDYQNKTCVQTLE 226
VN V++ H + YL+ SG+ DR ++ WD + V +E
Sbjct: 192 VNVVEF-HPSE--YLLASGSSDRTIRFWDLEKFHVVSCIE 228
Score = 168 (64.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 47/211 (22%), Positives = 96/211 (45%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + ++ + E ++A +G + VW+ E + +++ + + F P +
Sbjct: 59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS 118
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
++ +GS D + +++ +++H+ VRC+ P +L +++DD +KLW+
Sbjct: 119 FVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLT- 177
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
A F GH+ V + +P + AS S DRT++ W L +E V C
Sbjct: 178 AGKVMFEFTGHSGPVNVVEFHPSEY-LLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRC 236
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
+ + D L G D L +++ ++ + C
Sbjct: 237 ILF--NPDGCCLYGGFQDSL-RVYGWEPERC 264
Score = 132 (51.5 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 35/146 (23%), Positives = 61/146 (41%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
I R L + D HP ++ + + + +W+ + ++ VR +F
Sbjct: 97 ILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFS 156
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P W+ + +DD V +++ + F HS V V HP++ L + S D I+ W
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFW 216
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINP 152
+ EK + E T V I+ NP
Sbjct: 217 DLEKFHVVSCIEEEATP-VRCILFNP 241
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 193 (73.0 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 59/215 (27%), Positives = 92/215 (42%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L ++V C D + +++S +G V VW+ T + + V A + P
Sbjct: 56 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAP 115
Query: 68 RKNWIVTGSDDMQVCVF------NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
I G D + V+ N N + S H++Y+ + + +LT+S D
Sbjct: 116 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG 175
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN-NTFASASLDRTVKVWQLGSASPNFT 180
LW+ E Q F GH V+ + + P + NTF S D+ VW + S
Sbjct: 176 TCALWDVESGQLLQS-FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA 234
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
E HE VN V YY GD SG+DD +++D
Sbjct: 235 FETHESDVNSVRYYPSGDA--FASGSDDATCRLYD 267
Score = 121 (47.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 38/157 (24%), Positives = 68/157 (43%)
Query: 18 VKCCDLHPTEPW--MLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTG 75
V C DL P+E ++ + VW+ + Q V++FE + V + ++ P + +G
Sbjct: 198 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASG 257
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSDDMLIKLWNWEKAWA 133
SDD +++ + S +V + L +D I +W+ K
Sbjct: 258 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR 317
Query: 134 CQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVW 170
+F GH + V + ++P D F S S D T++VW
Sbjct: 318 VSILF-GHENRVSTLRVSP-DGTAFCSGSWDHTLRVW 352
Score = 114 (45.2 bits), Expect = 0.00027, P = 0.00027
Identities = 39/159 (24%), Positives = 67/159 (42%)
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSD 119
A F I+T S D +++ + + SF H V C+ + P++ ++
Sbjct: 158 ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC 217
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D +W+ ++ C Q FE H V + P + FAS S D T +++ L A
Sbjct: 218 DKKAMVWDM-RSGQCVQAFETHESDVNSVRYYPS-GDAFASGSDDATCRLYDL-RADREV 274
Query: 180 TLEGHEK---GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ E G + VD+ G L +G +D + +WD
Sbjct: 275 AIYSKESIIFGASSVDFSLSGR--LLFAGYNDYTINVWD 311
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 193 (73.0 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 58/215 (26%), Positives = 92/215 (42%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L ++V C D + +++S +G V VW+ T + + V A + P
Sbjct: 56 RRTLKGHGNKVLCMDWCKDKRRLVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAP 115
Query: 68 RKNWIVTGSDDMQVCVF------NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
I G D + V+ N N + S H++Y+ + + +LT+S D
Sbjct: 116 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG 175
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN-NTFASASLDRTVKVWQLGSASPNFT 180
LW+ E Q F GH V+ + + P + NTF S D+ VW + S
Sbjct: 176 TCALWDVESGQLLQS-FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA 234
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
E HE +N V YY GD SG+DD +++D
Sbjct: 235 FETHESDINSVRYYPSGDA--FASGSDDATCRLYD 267
Score = 120 (47.3 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 37/157 (23%), Positives = 68/157 (43%)
Query: 18 VKCCDLHPTEPW--MLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTG 75
V C DL P+E ++ + VW+ + Q V++FE + + + ++ P + +G
Sbjct: 198 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASG 257
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSDDMLIKLWNWEKAWA 133
SDD +++ + S +V + L +D I +W+ K
Sbjct: 258 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR 317
Query: 134 CQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVW 170
+F GH + V + ++P D F S S D T++VW
Sbjct: 318 VSILF-GHENRVSTLRVSP-DGTAFCSGSWDHTLRVW 352
Score = 113 (44.8 bits), Expect = 0.00035, P = 0.00035
Identities = 38/159 (23%), Positives = 67/159 (42%)
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSD 119
A F I+T S D +++ + + SF H V C+ + P++ ++
Sbjct: 158 ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC 217
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D +W+ ++ C Q FE H + + P + FAS S D T +++ L A
Sbjct: 218 DKKAMVWDM-RSGQCVQAFETHESDINSVRYYPS-GDAFASGSDDATCRLYDL-RADREV 274
Query: 180 TLEGHEK---GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ E G + VD+ G L +G +D + +WD
Sbjct: 275 AIYSKESIIFGASSVDFSLSGR--LLFAGYNDYTINVWD 311
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 191 (72.3 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 45/152 (29%), Positives = 75/152 (49%)
Query: 70 NWIVTGSDDMQVCVFNYNTLERFH-----SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIK 124
N +++GS D + ++N E+ + S E HS V + + L++S D ++
Sbjct: 29 NMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVISSDGAYALSASWDKSLR 88
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ-LGSASPNFTLEG 183
LW + F GHT+ V+ + + DN S S DRT+K+W LG T +G
Sbjct: 89 LWELSSGQTTR-TFVGHTNDVLSVSFSA-DNRQIVSGSRDRTIKLWNTLGDCKYTITDKG 146
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
H + V+CV + P ++S D+LVK+W+
Sbjct: 147 HTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWE 178
Score = 163 (62.4 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 49/222 (22%), Positives = 99/222 (44%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
KR L S V C + + L++ ++ + +W + Q ++F V + F
Sbjct: 56 KRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSA 115
Query: 68 RKNWIVTGSDDMQVCVFN-YNTLERFHSFEAHSDYVRCV--AVHPTQPFLLTSSDDMLIK 124
IV+GS D + ++N + + + H+++V CV + +P P ++++ D L+K
Sbjct: 116 DNRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVK 175
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+W Q GHT Y+ + I+P D + AS D +W L + ++L
Sbjct: 176 VWELASC-RLQTDHIGHTGYINTVTISP-DGSLCASGGKDGVTMLWDLNESKHLYSLHAG 233
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++ ++ + + Y + A + I+D + K+ V L+
Sbjct: 234 DE-IHALVF---SPNRYWLCAATSSSITIFDLEKKSKVDELK 271
Score = 138 (53.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 41/161 (25%), Positives = 70/161 (43%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+ ++ S D + ++ ++ + +F H++ V V+ +++ S D IKLWN
Sbjct: 77 YALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWN--T 134
Query: 131 AWACQQVF--EGHTHYVMQIVINPKDNN-TFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
C+ +GHT +V + +P N SA D+ VKVW+L S GH
Sbjct: 135 LGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIGHTGY 194
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
+N V G SG D + +WD + +L +G
Sbjct: 195 INTVTISPDGS--LCASGGKDGVTMLWDLNESKHLYSLHAG 233
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 198 (74.8 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 64/213 (30%), Positives = 92/213 (43%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDL-PVRAAKFV 66
K+ L S RV C HP L+ + +G+ H N + C L P+
Sbjct: 303 KQILAGHSQRVSCIAYHP-----LSGI-DGN-HTKNLVNIATTSADSTCKLWPLLNNDNN 355
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
N ++ + T + S E HSD V + HP ++ TSS+D +LW
Sbjct: 356 NNNNNNNDNEEEDNDATVSIET-QPILSLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLW 414
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ E C EGH+ VM I I D + A+ S D V++W L S P +GH K
Sbjct: 415 DLESGGKCLLDQEGHSDGVMGISIQ-SDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSK 473
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK 219
V VD+ G + L S ++D V IWD + K
Sbjct: 474 QVISVDWSPNGYQ--LASSSEDNTVVIWDIRKK 504
Score = 130 (50.8 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 55/224 (24%), Positives = 89/224 (39%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQN-VKSFEVCDLPVRAAKFVPRK 69
L SD V C HP ++ S + +W+ E+ + E V
Sbjct: 383 LEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLDQEGHSDGVMGISIQSDG 442
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW- 128
+ + TGS D V +++ + F+ HS V V P L +SS+D + +W+
Sbjct: 443 SLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWSPNGYQLASSSEDNTVVIWDIR 502
Query: 129 EKAWACQQVFEGHTHYVMQIVI-------NPKDNNT-------FASASLDRTVKVWQLGS 174
+K +CQ + H V + N +NN+ A+ S D +K W +
Sbjct: 503 KKEQSCQIL--AHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSFDGKIKTWSPNT 560
Query: 175 ASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
SP T EGH V +D + ++S + D+ KIW N
Sbjct: 561 WSPLATFEGHSSKVTSIDLTNSK----ILSTSFDKTWKIWSNDN 600
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 194 (73.4 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 57/208 (27%), Positives = 92/208 (44%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+ + A S V+ D T ML + + +W Q V SF + VR+AKF
Sbjct: 94 VSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFS 153
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P + T SDD V +++ ++ E +F R +A HP L + IK++
Sbjct: 154 PNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIF 213
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ + Q ++ H+ V + +P + S S DRT+++ L P +TL GH
Sbjct: 214 DVSGSQLLQ-LYVVHSAPVNDVAFHPS-GHFLLSGSDDRTIRILDLLEGRPIYTLTGHTD 271
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIW 214
VN V + GDK +G DR + +W
Sbjct: 272 AVNAVAFSRDGDK--FATGGSDRQLLVW 297
Score = 159 (61.0 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 47/134 (35%), Positives = 65/134 (48%)
Query: 83 VFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHT 142
+F LER H F HS + + P + TSS D + LWN +A C + F H+
Sbjct: 4 LFRDPALER-H-FTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIR-FASHS 60
Query: 143 HYVMQIVINPKDNNTFASASLDRTVKVWQ--LGSASPNFTLEGHEKGVNCVDYYHGGDKP 200
V + +PK N ASA DRTVK+W+ L S F H K V VD+ G
Sbjct: 61 APVNGVAWSPK-GNLVASAGHDRTVKIWEPKLRGVSGEFV--AHSKAVRSVDFDSTGH-- 115
Query: 201 YLISGADDRLVKIW 214
+++ +DD+ KIW
Sbjct: 116 LMLTASDDKSAKIW 129
Score = 133 (51.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 43/192 (22%), Positives = 81/192 (42%)
Query: 37 GH---VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFH 93
GH V +W + F VR+ F + ++T SDD ++ +
Sbjct: 79 GHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVS 138
Query: 94 SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPK 153
SF +++VR P + T+SDD +++++ + C + F Q+ +P
Sbjct: 139 SFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSG-ECVRTFTEERAAPRQLAWHPW 197
Query: 154 DNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
N + +R +K++ + + H VN V ++ G +L+SG+DDR ++I
Sbjct: 198 GNMLAVALGCNR-IKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGH--FLLSGSDDRTIRI 254
Query: 214 WDYQNKTCVQTL 225
D + TL
Sbjct: 255 LDLLEGRPIYTL 266
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 42/178 (23%), Positives = 69/178 (38%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
++R T S + P + S + V +WN F PV +
Sbjct: 10 LERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWS 69
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P+ N + + D V ++ F AHS VR V T +LT+SDD K+W
Sbjct: 70 PKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIW 129
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL--GSASPNFTLE 182
+ F ++V +P + A+AS D++V+++ + G FT E
Sbjct: 130 RVARRQFVSS-FAQQNNWVRSAKFSP-NGKLVATASDDKSVRIYDVDSGECVRTFTEE 185
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 33/133 (24%), Positives = 63/133 (47%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
V +++ ++ + V++F R + P N + ++ +F+ + + + H
Sbjct: 168 VRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVH 227
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
S V VA HP+ FLL+ SDD I++ + + + GHT V + + +D + F
Sbjct: 228 SAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTL-TGHTDAVNAVAFS-RDGDKF 285
Query: 159 ASASLDRTVKVWQ 171
A+ DR + VWQ
Sbjct: 286 ATGGSDRQLLVWQ 298
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 192 (72.6 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 55/219 (25%), Positives = 95/219 (43%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + +W+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLT 116
+ P N++ G D +C ++N T E R H+ Y+ C ++T
Sbjct: 102 TCAYAPSGNYVACGGLD-NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVT 159
Query: 117 SSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
SS D LW+ E F GHT VM + + P D F S + D + K+W +
Sbjct: 160 SSGDTTCALWDIETGQQTT-TFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGM 217
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ +G+DD +++D
Sbjct: 218 CRQTFTGHESDINAICFFPNGNA--FATGSDDATCRLFD 254
Score = 128 (50.1 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 37/156 (23%), Positives = 66/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ +++ T + H+ S +V A P+ ++ D + ++N +
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + T GH V
Sbjct: 130 EGNVRVSRELAGHTGYLS--CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ D +SGA D K+WD + C QT
Sbjct: 188 MSLSL--APDTRLFVSGACDASAKLWDVREGMCRQT 221
Score = 109 (43.4 bits), Expect = 0.00097, P = 0.00097
Identities = 44/212 (20%), Positives = 79/212 (37%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+ R+L + + CC ++ S + +W+ ET Q +F V +
Sbjct: 135 VSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLA 193
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P V+G+ D +++ +F H + + P T SDD +L+
Sbjct: 194 PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLF 253
Query: 127 NWEKAWACQQVFE-GHTHYVMQI--VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+ A Q++ H + + I V K + D VW A L G
Sbjct: 254 DLR---ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG 310
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
H+ V+C+ G + +G+ D +KIW+
Sbjct: 311 HDNRVSCLGVTDDGMA--VATGSWDSFLKIWN 340
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 192 (72.6 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 55/219 (25%), Positives = 95/219 (43%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + +W+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLT 116
+ P N++ G D +C ++N T E R H+ Y+ C ++T
Sbjct: 102 TCAYAPSGNYVACGGLD-NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVT 159
Query: 117 SSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
SS D LW+ E F GHT VM + + P D F S + D + K+W +
Sbjct: 160 SSGDTTCALWDIETGQQTT-TFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGM 217
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ +G+DD +++D
Sbjct: 218 CRQTFTGHESDINAICFFPNGNA--FATGSDDATCRLFD 254
Score = 128 (50.1 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 37/156 (23%), Positives = 66/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ +++ T + H+ S +V A P+ ++ D + ++N +
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + T GH V
Sbjct: 130 EGNVRVSRELAGHTGYLS--CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ D +SGA D K+WD + C QT
Sbjct: 188 MSLSL--APDTRLFVSGACDASAKLWDVREGMCRQT 221
Score = 109 (43.4 bits), Expect = 0.00097, P = 0.00097
Identities = 44/212 (20%), Positives = 79/212 (37%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+ R+L + + CC ++ S + +W+ ET Q +F V +
Sbjct: 135 VSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLA 193
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P V+G+ D +++ +F H + + P T SDD +L+
Sbjct: 194 PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLF 253
Query: 127 NWEKAWACQQVFE-GHTHYVMQI--VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+ A Q++ H + + I V K + D VW A L G
Sbjct: 254 DLR---ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG 310
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
H+ V+C+ G + +G+ D +KIW+
Sbjct: 311 HDNRVSCLGVTDDGMA--VATGSWDSFLKIWN 340
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 192 (72.6 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 55/219 (25%), Positives = 95/219 (43%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + +W+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLT 116
+ P N++ G D +C ++N T E R H+ Y+ C ++T
Sbjct: 102 TCAYAPSGNYVACGGLD-NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVT 159
Query: 117 SSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
SS D LW+ E F GHT VM + + P D F S + D + K+W +
Sbjct: 160 SSGDTTCALWDIETGQQTT-TFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGM 217
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ +G+DD +++D
Sbjct: 218 CRQTFTGHESDINAICFFPNGNA--FATGSDDATCRLFD 254
Score = 128 (50.1 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 37/156 (23%), Positives = 66/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ +++ T + H+ S +V A P+ ++ D + ++N +
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + T GH V
Sbjct: 130 EGNVRVSRELAGHTGYLS--CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ D +SGA D K+WD + C QT
Sbjct: 188 MSLSL--APDTRLFVSGACDASAKLWDVREGMCRQT 221
Score = 109 (43.4 bits), Expect = 0.00097, P = 0.00097
Identities = 44/212 (20%), Positives = 79/212 (37%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+ R+L + + CC ++ S + +W+ ET Q +F V +
Sbjct: 135 VSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLA 193
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P V+G+ D +++ +F H + + P T SDD +L+
Sbjct: 194 PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLF 253
Query: 127 NWEKAWACQQVFE-GHTHYVMQI--VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+ A Q++ H + + I V K + D VW A L G
Sbjct: 254 DLR---ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG 310
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
H+ V+C+ G + +G+ D +KIW+
Sbjct: 311 HDNRVSCLGVTDDGMA--VATGSWDSFLKIWN 340
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 192 (72.6 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 55/219 (25%), Positives = 95/219 (43%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + +W+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLT 116
+ P N++ G D +C ++N T E R H+ Y+ C ++T
Sbjct: 102 TCAYAPSGNYVACGGLD-NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVT 159
Query: 117 SSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
SS D LW+ E F GHT VM + + P D F S + D + K+W +
Sbjct: 160 SSGDTTCALWDIETGQQTT-TFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGM 217
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ +G+DD +++D
Sbjct: 218 CRQTFTGHESDINAICFFPNGNA--FATGSDDATCRLFD 254
Score = 128 (50.1 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 37/156 (23%), Positives = 66/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ +++ T + H+ S +V A P+ ++ D + ++N +
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + T GH V
Sbjct: 130 EGNVRVSRELAGHTGYLS--CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ D +SGA D K+WD + C QT
Sbjct: 188 MSLSL--APDTRLFVSGACDASAKLWDVREGMCRQT 221
Score = 109 (43.4 bits), Expect = 0.00097, P = 0.00097
Identities = 44/212 (20%), Positives = 79/212 (37%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+ R+L + + CC ++ S + +W+ ET Q +F V +
Sbjct: 135 VSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLA 193
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P V+G+ D +++ +F H + + P T SDD +L+
Sbjct: 194 PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLF 253
Query: 127 NWEKAWACQQVFE-GHTHYVMQI--VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+ A Q++ H + + I V K + D VW A L G
Sbjct: 254 DLR---ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG 310
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
H+ V+C+ G + +G+ D +KIW+
Sbjct: 311 HDNRVSCLGVTDDGMA--VATGSWDSFLKIWN 340
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 192 (72.6 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 55/219 (25%), Positives = 95/219 (43%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + +W+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLT 116
+ P N++ G D +C ++N T E R H+ Y+ C ++T
Sbjct: 102 TCAYAPSGNYVACGGLD-NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVT 159
Query: 117 SSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
SS D LW+ E F GHT VM + + P D F S + D + K+W +
Sbjct: 160 SSGDTTCALWDIETGQQTT-TFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGM 217
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ +G+DD +++D
Sbjct: 218 CRQTFTGHESDINAICFFPNGNA--FATGSDDATCRLFD 254
Score = 128 (50.1 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 37/156 (23%), Positives = 66/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ +++ T + H+ S +V A P+ ++ D + ++N +
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + T GH V
Sbjct: 130 EGNVRVSRELAGHTGYLS--CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ D +SGA D K+WD + C QT
Sbjct: 188 MSLSL--APDTRLFVSGACDASAKLWDVREGMCRQT 221
Score = 109 (43.4 bits), Expect = 0.00097, P = 0.00097
Identities = 44/212 (20%), Positives = 79/212 (37%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+ R+L + + CC ++ S + +W+ ET Q +F V +
Sbjct: 135 VSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLA 193
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P V+G+ D +++ +F H + + P T SDD +L+
Sbjct: 194 PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLF 253
Query: 127 NWEKAWACQQVFE-GHTHYVMQI--VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+ A Q++ H + + I V K + D VW A L G
Sbjct: 254 DLR---ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG 310
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
H+ V+C+ G + +G+ D +KIW+
Sbjct: 311 HDNRVSCLGVTDDGMA--VATGSWDSFLKIWN 340
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 192 (72.6 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 55/219 (25%), Positives = 95/219 (43%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + +W+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLT 116
+ P N++ G D +C ++N T E R H+ Y+ C ++T
Sbjct: 102 TCAYAPSGNYVACGGLD-NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVT 159
Query: 117 SSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
SS D LW+ E F GHT VM + + P D F S + D + K+W +
Sbjct: 160 SSGDTTCALWDIETGQQTT-TFAGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGM 217
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ +G+DD +++D
Sbjct: 218 CRQTFTGHESDINAICFFPNGNA--FATGSDDATCRLFD 254
Score = 128 (50.1 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 37/156 (23%), Positives = 66/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ +++ T + H+ S +V A P+ ++ D + ++N +
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + T GH V
Sbjct: 130 EGNVRVSRELAGHTGYLS--CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDV 187
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ D +SGA D K+WD + C QT
Sbjct: 188 MSLSL--APDTRLFVSGACDASAKLWDVREGMCRQT 221
Score = 109 (43.4 bits), Expect = 0.00097, P = 0.00097
Identities = 44/212 (20%), Positives = 79/212 (37%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+ R+L + + CC ++ S + +W+ ET Q +F V +
Sbjct: 135 VSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLA 193
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P V+G+ D +++ +F H + + P T SDD +L+
Sbjct: 194 PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLF 253
Query: 127 NWEKAWACQQVFE-GHTHYVMQI--VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+ A Q++ H + + I V K + D VW A L G
Sbjct: 254 DLR---ADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG 310
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
H+ V+C+ G + +G+ D +KIW+
Sbjct: 311 HDNRVSCLGVTDDGMA--VATGSWDSFLKIWN 340
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 192 (72.6 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 54/218 (24%), Positives = 98/218 (44%)
Query: 4 RLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAA 63
++ ++R L ++ ++++ +G + VW+ T V + + V
Sbjct: 51 KIKVRRNLKGHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMTC 110
Query: 64 KFVPRKNWIVTGSDDMQVC-VFNYNTLER----FHSFEAHSDYVRCVA-VHPTQPFLLTS 117
+ P N++ G D +C ++N + E+ +H+ Y+ C ++ Q ++TS
Sbjct: 111 AYSPTANFVACGGLD-NICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLNDRQ--IVTS 167
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
S DM LW+ E + F H VM + ++P D N F S + D T K+W L S
Sbjct: 168 SGDMTCILWDVENGTKITE-FSDHNGDVMSVSVSP-DKNYFISGACDATAKLWDLRSGKC 225
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N V Y+ G +G+DD +++D
Sbjct: 226 VQTFTGHEADINAVQYFPNGLS--FGTGSDDASCRLFD 261
Score = 134 (52.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/158 (25%), Positives = 70/158 (44%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW--- 128
+V+ S D ++ V++ T + H+ S +V A PT F+ D + ++N
Sbjct: 77 LVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMTCAYSPTANFVACGGLDNICSIYNLRSR 136
Query: 129 -EKAWACQQVFEGHTHYVMQI-VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ C+++ HT Y+ +N + ++S D T +W + + + H
Sbjct: 137 EQPIRVCREL-NSHTGYLSCCRFLNDRQ---IVTSSGDMTCILWDVENGTKITEFSDHNG 192
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
V V DK Y ISGA D K+WD ++ CVQT
Sbjct: 193 DVMSVSV--SPDKNYFISGACDATAKLWDLRSGKCVQT 228
Score = 127 (49.8 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 46/210 (21%), Positives = 91/210 (43%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVC-DLP-----VRAAKFVP 67
RS V C PT ++ + ++N + + + VC +L + +F+
Sbjct: 103 RSSWVMTCAYSPTANFVACGGLDNICSIYNLRSRE--QPIRVCRELNSHTGYLSCCRFLN 160
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
+ IVT S DM +++ + F H+ V V+V P + + ++ + D KLW+
Sbjct: 161 DRQ-IVTSSGDMTCILWDVENGTKITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWD 219
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP--NFTLEGHE 185
++ C Q F GH + + P + +F + S D + +++ + + +T +
Sbjct: 220 L-RSGKCVQTFTGHEADINAVQYFP-NGLSFGTGSDDASCRLFDIRADRELMQYTHDNIL 277
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
G+ V + G +L +G DD +WD
Sbjct: 278 CGITSVGFSFSGR--FLFAGYDDFTCNVWD 305
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
Identities = 47/215 (21%), Positives = 86/215 (40%)
Query: 2 PLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVR 61
P+R + R+L + + + CC + ++ S + +W+ E + F + V
Sbjct: 139 PIR--VCRELNSHTGYLSCCRFL-NDRQIVTSSGDMTCILWDVENGTKITEFSDHNGDVM 195
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
+ P KN+ ++G+ D +++ + + +F H + V P T SDD
Sbjct: 196 SVSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSFGTGSDDA 255
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIV-INPKDNNTFASASLDR-TVKVWQLGSASPNF 179
+L++ Q H + + I + + F A D T VW
Sbjct: 256 SCRLFDIRADRELMQYT--HDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTLKGERVL 313
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
+L GH V+C+ G L +G+ D L+KIW
Sbjct: 314 SLTGHGNRVSCLGVPTDGMA--LCTGSWDSLLKIW 346
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 194 (73.4 bits), Expect = 9.1e-15, P = 9.1e-15
Identities = 42/150 (28%), Positives = 79/150 (52%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S+D + ++++ T E S + H+D V+ VA L + S D+ IKLW+++++
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS 182
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+ C + GH H V + P + SAS DRT+K+W++ + T GH + V V
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVL-SASRDRTIKMWEVATGYCVKTYTGHREWVRMV 241
Query: 192 DYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
+ G + ++D+ +++W +K C
Sbjct: 242 RVHIEGS--IFATCSNDQTIRVWLTNSKDC 269
Score = 174 (66.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 43/185 (23%), Positives = 85/185 (45%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
K LT + HP M+++ + + +W+ ET + +S + V+ F
Sbjct: 101 KFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDA 160
Query: 68 RKNWIVTGSDDMQVCVFNYN-TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
+ + + S D+ + ++++ + E + H V VA P ++L++S D IK+W
Sbjct: 161 QGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ C + + GH +V + ++ + + FA+ S D+T++VW S L HE
Sbjct: 221 EVATGY-CVKTYTGHREWVRMVRVHI-EGSIFATCSNDQTIRVWLTNSKDCKVELRDHEH 278
Query: 187 GVNCV 191
V C+
Sbjct: 279 TVECI 283
Score = 172 (65.6 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 38/136 (27%), Positives = 70/136 (51%)
Query: 90 ERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIV 149
E+F S H + V HP ++++S+D I++W++E ++ +GHT V +
Sbjct: 100 EKF-SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETG-EYERSLKGHTDSVQDVA 157
Query: 150 INPKDNNTFASASLDRTVKVWQLGSASPNF-TLEGHEKGVNCVDYYHGGDKPYLISGADD 208
+ + AS S D ++K+W + T+ GH+ V+ V + GD Y++S + D
Sbjct: 158 FDAQ-GKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGD--YVLSASRD 214
Query: 209 RLVKIWDYQNKTCVQT 224
R +K+W+ CV+T
Sbjct: 215 RTIKMWEVATGYCVKT 230
Score = 156 (60.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 34/108 (31%), Positives = 55/108 (50%)
Query: 108 HPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTV 167
H PFL + S D I++W+ C GH ++V + +P SAS D+T+
Sbjct: 306 HHQGPFLASGSRDKTIRIWD-VSVGLCLLTLSGHDNWVRGLAFHP-GGKYLVSASDDKTI 363
Query: 168 KVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+VW L + TL H+ +D++ PY+ISG+ D+ VK+W+
Sbjct: 364 RVWDLRNKRCMKTLYAHQHFCTSIDFHKA--HPYVISGSVDQTVKVWE 409
Score = 151 (58.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 59/240 (24%), Positives = 107/240 (44%)
Query: 6 DIKRKLTARSDRVKCCDL-HPTEPWMLASLYNG-HVHVWNHETNQN-VKSFEVCDLPVRA 62
+ +R L +D V+ D+ + +LAS + +W+ + + +K+ D V +
Sbjct: 141 EYERSLKGHTDSVQ--DVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSS 198
Query: 63 AKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDML 122
FVP +++++ S D + ++ T ++ H ++VR V VH T S+D
Sbjct: 199 VAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQT 258
Query: 123 IKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS--ASLDRTVKVWQ---LGSASP 177
I++W + C+ H H V I P+ + + A D Q L S S
Sbjct: 259 IRVW-LTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSR 317
Query: 178 NFTLEGHEKGVN-CVDYYHGGDK--------P---YLISGADDRLVKIWDYQNKTCVQTL 225
+ T+ + V C+ G D P YL+S +DD+ +++WD +NK C++TL
Sbjct: 318 DKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTL 377
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 192 (72.6 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 58/215 (26%), Positives = 92/215 (42%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L ++V C D + +++S +G V VW+ T + + V A + P
Sbjct: 56 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAP 115
Query: 68 RKNWIVTGSDDMQVCVF------NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
I G D + V+ N N + S H++Y+ + + +LT+S D
Sbjct: 116 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG 175
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN-NTFASASLDRTVKVWQLGSASPNFT 180
LW+ E Q F GH V+ + + P + NTF S D+ VW + S
Sbjct: 176 TCALWDVESGQLLQS-FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA 234
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
E HE +N V YY GD SG+DD +++D
Sbjct: 235 FETHESDINSVRYYPSGDA--FASGSDDATCRLYD 267
Score = 120 (47.3 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 37/157 (23%), Positives = 68/157 (43%)
Query: 18 VKCCDLHPTEPW--MLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTG 75
V C DL P+E ++ + VW+ + Q V++FE + + + ++ P + +G
Sbjct: 198 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASG 257
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSDDMLIKLWNWEKAWA 133
SDD +++ + S +V + L +D I +W+ K
Sbjct: 258 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGAR 317
Query: 134 CQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVW 170
+F GH + V + ++P D F S S D T++VW
Sbjct: 318 VSILF-GHENRVSTLRVSP-DGTAFCSGSWDHTLRVW 352
Score = 113 (44.8 bits), Expect = 0.00035, P = 0.00035
Identities = 38/159 (23%), Positives = 67/159 (42%)
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSD 119
A F I+T S D +++ + + SF H V C+ + P++ ++
Sbjct: 158 ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC 217
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D +W+ ++ C Q FE H + + P + FAS S D T +++ L A
Sbjct: 218 DKKAMVWDM-RSGQCVQAFETHESDINSVRYYPS-GDAFASGSDDATCRLYDL-RADREV 274
Query: 180 TLEGHEK---GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ E G + VD+ G L +G +D + +WD
Sbjct: 275 AIYSKESIIFGASSVDFSLSGR--LLFAGYNDYTINVWD 311
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 192 (72.6 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 59/216 (27%), Positives = 92/216 (42%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L ++V C D + +++S +G V VW+ T + + V A + P
Sbjct: 56 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAP 115
Query: 68 RKNWIVTGSDDMQVCVF------NYNTLERFHSFEAHSDYVR-CVAVHPTQPFLLTSSDD 120
I G D + V+ N N + S H++Y+ C + +LT+S D
Sbjct: 116 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQQILTASGD 175
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN-NTFASASLDRTVKVWQLGSASPNF 179
LW+ E Q F GH V+ + + P + NTF S D+ VW + S
Sbjct: 176 GTCALWDVESGQLLQS-FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQ 234
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
E HE +N V YY GD SG+DD +++D
Sbjct: 235 AFETHESDINSVRYYPSGDA--FASGSDDATCRLYD 268
Score = 119 (46.9 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 36/157 (22%), Positives = 68/157 (43%)
Query: 18 VKCCDLHPTEPW--MLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTG 75
V C DL P+E ++ + VW+ + Q +++FE + + + ++ P + +G
Sbjct: 199 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYYPSGDAFASG 258
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSDDMLIKLWNWEKAWA 133
SDD +++ + S +V + L +D I +W+ K
Sbjct: 259 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR 318
Query: 134 CQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVW 170
+F GH + V + ++P D F S S D T++VW
Sbjct: 319 VSILF-GHENRVSTLRVSP-DGTAFCSGSWDHTLRVW 353
Score = 115 (45.5 bits), Expect = 0.00021, P = 0.00021
Identities = 38/164 (23%), Positives = 65/164 (39%)
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW 128
K IV+ S D +V V++ T + H+ +V A P+ + D ++
Sbjct: 75 KRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 134
Query: 129 -----EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
E A ++ HT+Y+ D +AS D T +W + S + G
Sbjct: 135 TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQQILTASGDGTCALWDVESGQLLQSFHG 194
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
H V C+D +SG D+ +WD ++ C+Q E+
Sbjct: 195 HGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQAFET 238
Score = 110 (43.8 bits), Expect = 0.00079, P = 0.00079
Identities = 36/149 (24%), Positives = 65/149 (43%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSDDMLIKLWNWE 129
I+T S D +++ + + SF H V C+ + P++ ++ D +W+
Sbjct: 169 ILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDM- 227
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK--- 186
++ C Q FE H + + P + FAS S D T +++ L A + E
Sbjct: 228 RSGQCIQAFETHESDINSVRYYPS-GDAFASGSDDATCRLYDL-RADREVAIYSKESIIF 285
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
G + VD+ G L +G +D + +WD
Sbjct: 286 GASSVDFSLSGR--LLFAGYNDYTINVWD 312
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 193 (73.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 59/215 (27%), Positives = 92/215 (42%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L ++V C D + +++S +G V VW+ T + + V A + P
Sbjct: 98 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAP 157
Query: 68 RKNWIVTGSDDMQVCVF------NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
I G D + V+ N N + S H++Y+ + + +LT+S D
Sbjct: 158 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG 217
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN-NTFASASLDRTVKVWQLGSASPNFT 180
LW+ E Q F GH V+ + + P + NTF S D+ VW + S
Sbjct: 218 TCALWDVESGQLLQS-FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA 276
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
E HE VN V YY GD SG+DD +++D
Sbjct: 277 FETHESDVNSVRYYPSGDA--FASGSDDATCRLYD 309
Score = 121 (47.7 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 38/157 (24%), Positives = 68/157 (43%)
Query: 18 VKCCDLHPTEPW--MLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTG 75
V C DL P+E ++ + VW+ + Q V++FE + V + ++ P + +G
Sbjct: 240 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASG 299
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSDDMLIKLWNWEKAWA 133
SDD +++ + S +V + L +D I +W+ K
Sbjct: 300 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR 359
Query: 134 CQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVW 170
+F GH + V + ++P D F S S D T++VW
Sbjct: 360 VSILF-GHENRVSTLRVSP-DGTAFCSGSWDHTLRVW 394
Score = 114 (45.2 bits), Expect = 0.00033, P = 0.00033
Identities = 39/159 (24%), Positives = 67/159 (42%)
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSD 119
A F I+T S D +++ + + SF H V C+ + P++ ++
Sbjct: 200 ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC 259
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D +W+ ++ C Q FE H V + P + FAS S D T +++ L A
Sbjct: 260 DKKAMVWDM-RSGQCVQAFETHESDVNSVRYYPS-GDAFASGSDDATCRLYDL-RADREV 316
Query: 180 TLEGHEK---GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ E G + VD+ G L +G +D + +WD
Sbjct: 317 AIYSKESIIFGASSVDFSLSGR--LLFAGYNDYTINVWD 353
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 193 (73.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 48/154 (31%), Positives = 75/154 (48%)
Query: 73 VTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVH-PTQPFLLTSSDDMLIKLWNWEKA 131
+TGS D V++ + E H+ E H + V +A + P + T S D KLW+ E
Sbjct: 108 ITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETG 167
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
C F GHT ++ + NP+ + A+ S+D T K+W + S TL GH + +
Sbjct: 168 -KCYHTFRGHTAEIVCLSFNPQ-STVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISL 225
Query: 192 DYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
+ GD+ +I+G+ D V +WD V TL
Sbjct: 226 SFDTSGDR--IITGSFDHTVVVWDASTGRKVHTL 257
Score = 168 (64.2 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 47/209 (22%), Positives = 89/209 (42%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSD 77
+ C +P + + +W+ ++ + V + + + F + I+TGS
Sbjct: 180 IVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSF 239
Query: 78 DMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQV 137
D V V++ +T + H+ H + +LT S D LW+ + C
Sbjct: 240 DHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWD-ATSGKCVAT 298
Query: 138 FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGG 197
GH ++ + A+AS D T +V+ + LEGHE ++ + + G
Sbjct: 299 LTGHDDEILDSCFD-YTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQG 357
Query: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++ L++G+ D+ +IWD Q C+Q LE
Sbjct: 358 NR--LLTGSSDKTARIWDVQTGQCLQVLE 384
Score = 158 (60.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 46/192 (23%), Positives = 85/192 (44%)
Query: 35 YNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV-PRKNWIVTGSDDMQVCVFNYNTLERFH 93
Y+ VW+ + + + + E V A F P + I TGS D +++ T + +H
Sbjct: 112 YDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYH 171
Query: 94 SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPK 153
+F H+ + C++ +P + T S D KLW+ + + GH ++ + +
Sbjct: 172 TFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTL-TGHLAEIISLSFDTS 230
Query: 154 DNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
+ + S D TV VW + TL GH ++ + D +++G+ D+ +
Sbjct: 231 GDRII-TGSFDHTVVVWDASTGRKVHTLIGHCAEISSALF--SWDCSLILTGSMDKTCML 287
Query: 214 WDYQNKTCVQTL 225
WD + CV TL
Sbjct: 288 WDATSGKCVATL 299
Score = 138 (53.6 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 43/186 (23%), Positives = 81/186 (43%)
Query: 30 MLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTL 89
++ ++ V VW+ T + V + + +A F + I+TGS D +++ +
Sbjct: 234 IITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSG 293
Query: 90 ERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIV 149
+ + H D + T + T+S D +++N C EGH + +I
Sbjct: 294 KCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYN-ATTRKCITKLEGHEGEISKIS 352
Query: 150 INPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV-NCVDYYHGGDKPYLISGADD 208
NP+ N +S D+T ++W + + LEGH + +C Y G +I+G+ D
Sbjct: 353 FNPQGNRLLTGSS-DKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGN---IVITGSKD 408
Query: 209 RLVKIW 214
+IW
Sbjct: 409 NSCRIW 414
Score = 128 (50.1 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 35/134 (26%), Positives = 56/134 (41%)
Query: 92 FHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVIN 151
F AH + VA++ +T S D K+W+ + EGH + V I N
Sbjct: 85 FKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTL-EGHRNVVYAIAFN 143
Query: 152 PKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLV 211
+ A+ S D+T K+W + T GH + C+ + + +G+ D
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSF--NPQSTVVATGSMDTTA 201
Query: 212 KIWDYQNKTCVQTL 225
K+WD Q+ V TL
Sbjct: 202 KLWDIQSGEEVVTL 215
Score = 123 (48.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 29/100 (29%), Positives = 45/100 (45%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
I T S D V+N T + E H + ++ +P LLT S D ++W+ +
Sbjct: 318 IATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTG 377
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
C QV EGHT + N K N + S D + ++W+
Sbjct: 378 -QCLQVLEGHTDEIFSCAFNYK-GNIVITGSKDNSCRIWR 415
>UNIPROTKB|O14775 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0007165
"signal transduction" evidence=NAS] [GO:0005834 "heterotrimeric
G-protein complex" evidence=NAS] [GO:0006184 "GTP catabolic
process" evidence=NAS] Reactome:REACT_13685 Reactome:REACT_604
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005634
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
Pathway_Interaction_DB:txa2pathway
Pathway_Interaction_DB:cone_pathway
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
GO:GO:0005834 HOGENOM:HOG000176356 HOVERGEN:HBG000188
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE
EMBL:AF017656 EMBL:AL117471 EMBL:AF501885 EMBL:AF300650
EMBL:BC013997 IPI:IPI00151607 IPI:IPI00745232 IPI:IPI00967497
PIR:T17256 RefSeq:NP_006569.1 RefSeq:NP_057278.2 UniGene:Hs.155090
ProteinModelPortal:O14775 SMR:O14775 IntAct:O14775
MINT:MINT-1399610 STRING:O14775 PhosphoSite:O14775 PaxDb:O14775
PRIDE:O14775 DNASU:10681 Ensembl:ENST00000261837
Ensembl:ENST00000358784 Ensembl:ENST00000396335 GeneID:10681
KEGG:hsa:10681 UCSC:uc002abr.1 UCSC:uc002abs.1 CTD:10681
GeneCards:GC15M052413 HGNC:HGNC:4401 HPA:CAB032353 HPA:HPA041942
MIM:604447 neXtProt:NX_O14775 PharmGKB:PA28780 InParanoid:O14775
OrthoDB:EOG4XWFXZ PhylomeDB:O14775 ChiTaRS:GNB5 GenomeRNAi:10681
NextBio:40605 ArrayExpress:O14775 Bgee:O14775 CleanEx:HS_GNB5
Genevestigator:O14775 GermOnline:ENSG00000069966 Uniprot:O14775
Length = 395
Score = 192 (72.6 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 58/215 (26%), Positives = 92/215 (42%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L ++V C D + +++S +G V VW+ T + + V A + P
Sbjct: 98 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAP 157
Query: 68 RKNWIVTGSDDMQVCVF------NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
I G D + V+ N N + S H++Y+ + + +LT+S D
Sbjct: 158 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG 217
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN-NTFASASLDRTVKVWQLGSASPNFT 180
LW+ E Q F GH V+ + + P + NTF S D+ VW + S
Sbjct: 218 TCALWDVESGQLLQS-FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA 276
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
E HE +N V YY GD SG+DD +++D
Sbjct: 277 FETHESDINSVRYYPSGDA--FASGSDDATCRLYD 309
Score = 120 (47.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 37/157 (23%), Positives = 68/157 (43%)
Query: 18 VKCCDLHPTEPW--MLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTG 75
V C DL P+E ++ + VW+ + Q V++FE + + + ++ P + +G
Sbjct: 240 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASG 299
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSDDMLIKLWNWEKAWA 133
SDD +++ + S +V + L +D I +W+ K
Sbjct: 300 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR 359
Query: 134 CQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVW 170
+F GH + V + ++P D F S S D T++VW
Sbjct: 360 VSILF-GHENRVSTLRVSP-DGTAFCSGSWDHTLRVW 394
Score = 113 (44.8 bits), Expect = 0.00042, P = 0.00042
Identities = 38/159 (23%), Positives = 67/159 (42%)
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSD 119
A F I+T S D +++ + + SF H V C+ + P++ ++
Sbjct: 200 ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC 259
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D +W+ ++ C Q FE H + + P + FAS S D T +++ L A
Sbjct: 260 DKKAMVWDM-RSGQCVQAFETHESDINSVRYYPS-GDAFASGSDDATCRLYDL-RADREV 316
Query: 180 TLEGHEK---GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ E G + VD+ G L +G +D + +WD
Sbjct: 317 AIYSKESIIFGASSVDFSLSGR--LLFAGYNDYTINVWD 353
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 192 (72.6 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 59/216 (27%), Positives = 92/216 (42%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L ++V C D + +++S +G V VW+ T + + V A + P
Sbjct: 98 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAP 157
Query: 68 RKNWIVTGSDDMQVCVF------NYNTLERFHSFEAHSDYVR-CVAVHPTQPFLLTSSDD 120
I G D + V+ N N + S H++Y+ C + +LT+S D
Sbjct: 158 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQQILTASGD 217
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN-NTFASASLDRTVKVWQLGSASPNF 179
LW+ E Q F GH V+ + + P + NTF S D+ VW + S
Sbjct: 218 GTCALWDVESGQLLQS-FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQ 276
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
E HE +N V YY GD SG+DD +++D
Sbjct: 277 AFETHESDINSVRYYPSGDA--FASGSDDATCRLYD 310
Score = 119 (46.9 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 36/157 (22%), Positives = 68/157 (43%)
Query: 18 VKCCDLHPTEPW--MLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTG 75
V C DL P+E ++ + VW+ + Q +++FE + + + ++ P + +G
Sbjct: 241 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYYPSGDAFASG 300
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSDDMLIKLWNWEKAWA 133
SDD +++ + S +V + L +D I +W+ K
Sbjct: 301 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR 360
Query: 134 CQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVW 170
+F GH + V + ++P D F S S D T++VW
Sbjct: 361 VSILF-GHENRVSTLRVSP-DGTAFCSGSWDHTLRVW 395
Score = 115 (45.5 bits), Expect = 0.00025, P = 0.00025
Identities = 38/164 (23%), Positives = 65/164 (39%)
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW 128
K IV+ S D +V V++ T + H+ +V A P+ + D ++
Sbjct: 117 KRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 176
Query: 129 -----EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
E A ++ HT+Y+ D +AS D T +W + S + G
Sbjct: 177 TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQQILTASGDGTCALWDVESGQLLQSFHG 236
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
H V C+D +SG D+ +WD ++ C+Q E+
Sbjct: 237 HGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQAFET 280
Score = 110 (43.8 bits), Expect = 0.00095, P = 0.00095
Identities = 36/149 (24%), Positives = 65/149 (43%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSDDMLIKLWNWE 129
I+T S D +++ + + SF H V C+ + P++ ++ D +W+
Sbjct: 211 ILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDM- 269
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK--- 186
++ C Q FE H + + P + FAS S D T +++ L A + E
Sbjct: 270 RSGQCIQAFETHESDINSVRYYPS-GDAFASGSDDATCRLYDL-RADREVAIYSKESIIF 327
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
G + VD+ G L +G +D + +WD
Sbjct: 328 GASSVDFSLSGR--LLFAGYNDYTINVWD 354
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 194 (73.4 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 59/222 (26%), Positives = 109/222 (49%)
Query: 9 RKLTARSDRVK--CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+++ RS+ K C L + +++ L + + +W+ + + +K V ++
Sbjct: 182 QRIQCRSENSKGVYC-LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD 240
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
R IVTGS D V V++ NT E ++ H++ V + + + ++T S D I +W
Sbjct: 241 ERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVW 296
Query: 127 NWEKAW--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+ A ++V GH V + D+ SAS DRT+KVW + TL GH
Sbjct: 297 DMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH 353
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++G+ C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 354 KRGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 391
Score = 134 (52.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V++ +T E + H + C+ +++ S D I+LW+ E
Sbjct: 326 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 382
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 383 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 439
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
H V + + D+ +IS + D + IWD+ N
Sbjct: 440 VEHSGRVFRLQF----DEFQIISSSHDDTILIWDFLN 472
Score = 134 (52.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAK 64
L+ + LT + V C L E ++ + V VW+ T + + + + V +
Sbjct: 221 LECLKVLTGHTGSVLC--LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 278
Query: 65 FVPRKNWIVTGSDDMQVCVFNYN-----TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
F +VT S D + V++ TL R H V V +++++S
Sbjct: 279 F--SNGLMVTCSKDRSIAVWDMASATDITLRRV--LVGHRAAVNVVDFD--DKYIVSASG 332
Query: 120 DMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
D IK+W+ C+ V GH + + +D S S D T+++W + +
Sbjct: 333 DRTIKVWSTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGAC 386
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
LEGHE+ V C+ + D ++SGA D +K+WD Q
Sbjct: 387 LRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQ 422
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 192 (72.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 51/194 (26%), Positives = 92/194 (47%)
Query: 35 YNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV-PRKNWIVTGSDDMQVCVFNYNTLERFH 93
Y+ +W+ + + + + E V A F P + I TGS D +++ T + +H
Sbjct: 112 YDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYH 171
Query: 94 SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFE--GHTHYVMQIVIN 151
+F H+ + C++ +P + T S D KLW+ + ++VF GH+ ++ + N
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSG---EEVFTLTGHSAEIISLSFN 228
Query: 152 PKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLV 211
N + S D TV VW+ + +TL GH ++ + D +++G+ D+
Sbjct: 229 TSGNRII-TGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVF--NWDCSLILTGSMDKTC 285
Query: 212 KIWDYQNKTCVQTL 225
K+WD N CV TL
Sbjct: 286 KLWDAVNGKCVATL 299
Score = 191 (72.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 46/154 (29%), Positives = 76/154 (49%)
Query: 73 VTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVH-PTQPFLLTSSDDMLIKLWNWEKA 131
+TGS D +++ + E H+ E H + V +A + P + T S D KLW+ E
Sbjct: 108 ITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG 167
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
C F GHT ++ + NP+ + A+ S+D T K+W + S FTL GH + +
Sbjct: 168 -KCYHTFRGHTAEIVCLSFNPQ-STLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISL 225
Query: 192 DYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
+ G++ +I+G+ D V +W+ V TL
Sbjct: 226 SFNTSGNR--IITGSFDHTVTVWEADTGRKVYTL 257
Score = 176 (67.0 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 47/209 (22%), Positives = 89/209 (42%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSD 77
+ C +P + + +W+ ++ + V + + + F N I+TGS
Sbjct: 180 IVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSF 239
Query: 78 DMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQV 137
D V V+ +T + ++ H + + +LT S D KLW+ C
Sbjct: 240 DHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNG-KCVAT 298
Query: 138 FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGG 197
GH ++ + A+AS D T +++ + LEGHE ++ + + G
Sbjct: 299 LTGHDDEILDSCFD-YTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQG 357
Query: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++ L++G+ D+ +IWD Q C+Q LE
Sbjct: 358 NR--LLTGSSDKTARIWDAQTGQCLQVLE 384
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 36/134 (26%), Positives = 58/134 (43%)
Query: 92 FHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVIN 151
F AH + VA++ + +T S D KLW+ + EGH + V I N
Sbjct: 85 FKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTL-EGHRNVVYAIAFN 143
Query: 152 PKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLV 211
+ A+ S D+T K+W + + T GH + C+ + + +G+ D
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSF--NPQSTLVATGSMDTTA 201
Query: 212 KIWDYQNKTCVQTL 225
K+WD Q+ V TL
Sbjct: 202 KLWDIQSGEEVFTL 215
Score = 131 (51.2 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 44/204 (21%), Positives = 85/204 (41%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT S + + + ++ ++ V VW +T + V + + +A F +
Sbjct: 215 LTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCS 274
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
I+TGS D +++ + + H D + T + T+S D ++++
Sbjct: 275 LILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS-AA 333
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
C EGH + +I NP+ N +S D+T ++W + LEGH +
Sbjct: 334 TRECVTKLEGHEGEISKISFNPQGNRLLTGSS-DKTARIWDAQTGQCLQVLEGHTDEIFS 392
Query: 191 VDYYHGGDKPYLISGADDRLVKIW 214
+ + GD +I+G+ D +IW
Sbjct: 393 CAFNYKGD--IIITGSKDNTCRIW 414
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 194 (73.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 59/222 (26%), Positives = 109/222 (49%)
Query: 9 RKLTARSDRVK--CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+++ RS+ K C L + +++ L + + +W+ + + +K V ++
Sbjct: 216 QRIQCRSENSKGVYC-LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD 274
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
R IVTGS D V V++ NT E ++ H++ V + + + ++T S D I +W
Sbjct: 275 ERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVW 330
Query: 127 NWEKAW--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+ A ++V GH V + D+ SAS DRT+KVW + TL GH
Sbjct: 331 DMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH 387
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++G+ C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 388 KRGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 425
Score = 134 (52.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V++ +T E + H + C+ +++ S D I+LW+ E
Sbjct: 360 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 416
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 417 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 473
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
H V + + D+ +IS + D + IWD+ N
Sbjct: 474 VEHSGRVFRLQF----DEFQIISSSHDDTILIWDFLN 506
Score = 134 (52.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAK 64
L+ + LT + V C L E ++ + V VW+ T + + + + V +
Sbjct: 255 LECLKVLTGHTGSVLC--LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 312
Query: 65 FVPRKNWIVTGSDDMQVCVFNYN-----TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
F +VT S D + V++ TL R H V V +++++S
Sbjct: 313 F--SNGLMVTCSKDRSIAVWDMASATDITLRRV--LVGHRAAVNVVDFD--DKYIVSASG 366
Query: 120 DMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
D IK+W+ C+ V GH + + +D S S D T+++W + +
Sbjct: 367 DRTIKVWSTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGAC 420
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
LEGHE+ V C+ + D ++SGA D +K+WD Q
Sbjct: 421 LRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQ 456
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 181 (68.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 47/157 (29%), Positives = 79/157 (50%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
I+TGS D V V++ NT E ++ H + V + + ++T S D I +W+
Sbjct: 356 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASP 413
Query: 132 W--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
++V GH V + D+ SAS DRT+KVW + TL GH++G+
Sbjct: 414 TDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 470
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 471 CLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 503
Score = 159 (61.0 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 43/158 (27%), Positives = 74/158 (46%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
IV+G D + +++ NTLE H+ V C+ + ++T S D +++W+
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNTG 373
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE----GHEKG 187
+ H V+ + N N + S DR++ VW + S + + TL GH
Sbjct: 374 EMLNTLIH-HCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPT-DITLRRVLVGHRAA 428
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
VN VD+ D Y++S + DR +K+W+ V+TL
Sbjct: 429 VNVVDF----DDKYIVSASGDRTIKVWNTSTCEFVRTL 462
Score = 149 (57.5 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 58/219 (26%), Positives = 95/219 (43%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSF-EVCDLPVRAA 63
L+ KR LT + V C L E ++ + V VW+ T + + + C+ V
Sbjct: 333 LECKRILTGHTGSVLC--LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA-VLHL 389
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYN-----TLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
+F +VT S D + V++ TL R H V V +++++S
Sbjct: 390 RF--NNGMMVTCSKDRSIAVWDMASPTDITLRRV--LVGHRAAVNVVDFD--DKYIVSAS 443
Query: 119 DDMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
D IK+WN C+ V GH + + +D S S D T+++W + +
Sbjct: 444 GDRTIKVWNTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGA 497
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
LEGHE+ V C+ + D ++SGA D +K+WD
Sbjct: 498 CLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWD 532
Score = 140 (54.3 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 46/162 (28%), Positives = 71/162 (43%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V+N +T E + H + C+ +++ S D I+LW+ E
Sbjct: 438 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 494
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 495 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL 551
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
H V + + D+ ++S + D + IWD+ N Q
Sbjct: 552 VEHSGRVFRLQF----DEFQIVSSSHDDTILIWDFLNDPAAQ 589
Score = 37 (18.1 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 21/77 (27%), Positives = 31/77 (40%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI- 72
RS + C L + P L LYN QN E C+ K +P KN +
Sbjct: 21 RSLWLGCSSLADSMP-SLRCLYNPGTGALT--AFQNSSEREDCNNGEPPRKIIPEKNSLR 77
Query: 73 VTGSDDMQVCVFNYNTL 89
T + ++C+ N T+
Sbjct: 78 QTYNSCARLCL-NQETV 93
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 181 (68.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 47/157 (29%), Positives = 79/157 (50%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
I+TGS D V V++ NT E ++ H + V + + ++T S D I +W+
Sbjct: 356 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASP 413
Query: 132 W--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
++V GH V + D+ SAS DRT+KVW + TL GH++G+
Sbjct: 414 TDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 470
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 471 CLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 503
Score = 154 (59.3 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 42/158 (26%), Positives = 74/158 (46%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
IV+G D + +++ +TLE H+ V C+ + ++T S D +++W+
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNTG 373
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE----GHEKG 187
+ H V+ + N N + S DR++ VW + S + + TL GH
Sbjct: 374 EMLNTLIH-HCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPT-DITLRRVLVGHRAA 428
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
VN VD+ D Y++S + DR +K+W+ V+TL
Sbjct: 429 VNVVDF----DDKYIVSASGDRTIKVWNTSTCEFVRTL 462
Score = 149 (57.5 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 58/219 (26%), Positives = 95/219 (43%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSF-EVCDLPVRAA 63
L+ KR LT + V C L E ++ + V VW+ T + + + C+ V
Sbjct: 333 LECKRILTGHTGSVLC--LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEA-VLHL 389
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYN-----TLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
+F +VT S D + V++ TL R H V V +++++S
Sbjct: 390 RF--NNGMMVTCSKDRSIAVWDMASPTDITLRRV--LVGHRAAVNVVDFD--DKYIVSAS 443
Query: 119 DDMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
D IK+WN C+ V GH + + +D S S D T+++W + +
Sbjct: 444 GDRTIKVWNTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGA 497
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
LEGHE+ V C+ + D ++SGA D +K+WD
Sbjct: 498 CLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWD 532
Score = 140 (54.3 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 46/162 (28%), Positives = 71/162 (43%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V+N +T E + H + C+ +++ S D I+LW+ E
Sbjct: 438 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 494
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 495 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL 551
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
H V + + D+ ++S + D + IWD+ N Q
Sbjct: 552 VEHSGRVFRLQF----DEFQIVSSSHDDTILIWDFLNDPAAQ 589
Score = 37 (18.1 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 21/77 (27%), Positives = 31/77 (40%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI- 72
RS + C L + P L LYN QN E C+ K +P KN +
Sbjct: 21 RSLWLGCSSLADSMP-SLRCLYNPGTGALT--AFQNSSEREDCNNGEPPRKIIPEKNSLR 77
Query: 73 VTGSDDMQVCVFNYNTL 89
T + ++C+ N T+
Sbjct: 78 QTYNSCARLCL-NQETV 93
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 194 (73.4 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 59/222 (26%), Positives = 109/222 (49%)
Query: 9 RKLTARSDRVK--CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+++ RS+ K C L + +++ L + + +W+ + + +K V ++
Sbjct: 231 QRIQCRSENSKGVYC-LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD 289
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
R IVTGS D V V++ NT E ++ H++ V + + + ++T S D I +W
Sbjct: 290 ERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVW 345
Query: 127 NWEKAW--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+ A ++V GH V + D+ SAS DRT+KVW + TL GH
Sbjct: 346 DMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH 402
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++G+ C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 403 KRGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 440
Score = 134 (52.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V++ +T E + H + C+ +++ S D I+LW+ E
Sbjct: 375 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 431
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 432 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 488
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
H V + + D+ +IS + D + IWD+ N
Sbjct: 489 VEHSGRVFRLQF----DEFQIISSSHDDTILIWDFLN 521
Score = 134 (52.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAK 64
L+ + LT + V C L E ++ + V VW+ T + + + + V +
Sbjct: 270 LECLKVLTGHTGSVLC--LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 327
Query: 65 FVPRKNWIVTGSDDMQVCVFNYN-----TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
F +VT S D + V++ TL R H V V +++++S
Sbjct: 328 F--SNGLMVTCSKDRSIAVWDMASATDITLRRV--LVGHRAAVNVVDFD--DKYIVSASG 381
Query: 120 DMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
D IK+W+ C+ V GH + + +D S S D T+++W + +
Sbjct: 382 DRTIKVWSTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGAC 435
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
LEGHE+ V C+ + D ++SGA D +K+WD Q
Sbjct: 436 LRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQ 471
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 189 (71.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 57/220 (25%), Positives = 99/220 (45%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + +W+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLT 116
+ P N++ G D +C +++ T E R H+ Y+ C ++T
Sbjct: 102 TCAYAPSGNFVACGGLD-NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IIT 159
Query: 117 SSDDMLIKLWNWEKAWACQQV-FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA 175
SS D LW+ E Q V F GH+ VM + + P D TF S + D ++K+W + +
Sbjct: 160 SSGDTTCALWDIETGQ--QTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVRDS 216
Query: 176 SPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N V ++ G +G+DD +++D
Sbjct: 217 MCRQTFIGHESDINAVAFFPNGYA--FTTGSDDATCRLFD 254
Score = 132 (51.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 50/211 (23%), Positives = 92/211 (43%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQ-NVKSFEVCDLP-----VRAAKFVP 67
RS V C P+ ++ + +++ +T + NV+ +LP + +F+
Sbjct: 96 RSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLD 153
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
N I+T S D +++ T ++ F HS V +++ P ++ + D IKLW+
Sbjct: 154 -DNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK- 186
+ C+Q F GH + + P + F + S D T +++ L A + H+
Sbjct: 213 VRDSM-CRQTFIGHESDINAVAFFP-NGYAFTTGSDDATCRLFDL-RADQELLMYSHDNI 269
Query: 187 --GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
G+ V + G L++G DD IWD
Sbjct: 270 ICGITSVAFSRSGR--LLLAGYDDFNCNIWD 298
Score = 124 (48.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/156 (23%), Positives = 67/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ +++ T + H+ S +V A P+ F+ D + +++ +
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + GH V
Sbjct: 130 EGNVRVSRELPGHTGYLS--CCRFLDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDV 187
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ G +SGA D +K+WD ++ C QT
Sbjct: 188 MSLSLAPDGRT--FVSGACDASIKLWDVRDSMCRQT 221
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 189 (71.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 57/220 (25%), Positives = 99/220 (45%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + +W+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLT 116
+ P N++ G D +C +++ T E R H+ Y+ C ++T
Sbjct: 102 TCAYAPSGNFVACGGLD-NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IIT 159
Query: 117 SSDDMLIKLWNWEKAWACQQV-FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA 175
SS D LW+ E Q V F GH+ VM + + P D TF S + D ++K+W + +
Sbjct: 160 SSGDTTCALWDIETGQ--QTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVRDS 216
Query: 176 SPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N V ++ G +G+DD +++D
Sbjct: 217 MCRQTFIGHESDINAVAFFPNGYA--FTTGSDDATCRLFD 254
Score = 132 (51.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 50/211 (23%), Positives = 92/211 (43%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQ-NVKSFEVCDLP-----VRAAKFVP 67
RS V C P+ ++ + +++ +T + NV+ +LP + +F+
Sbjct: 96 RSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLD 153
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
N I+T S D +++ T ++ F HS V +++ P ++ + D IKLW+
Sbjct: 154 -DNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK- 186
+ C+Q F GH + + P + F + S D T +++ L A + H+
Sbjct: 213 VRDSM-CRQTFIGHESDINAVAFFP-NGYAFTTGSDDATCRLFDL-RADQELLMYSHDNI 269
Query: 187 --GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
G+ V + G L++G DD IWD
Sbjct: 270 ICGITSVAFSRSGR--LLLAGYDDFNCNIWD 298
Score = 124 (48.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/156 (23%), Positives = 67/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ +++ T + H+ S +V A P+ F+ D + +++ +
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + GH V
Sbjct: 130 EGNVRVSRELPGHTGYLS--CCRFLDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDV 187
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ G +SGA D +K+WD ++ C QT
Sbjct: 188 MSLSLAPDGRT--FVSGACDASIKLWDVRDSMCRQT 221
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 189 (71.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 57/220 (25%), Positives = 99/220 (45%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + +W+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLT 116
+ P N++ G D +C +++ T E R H+ Y+ C ++T
Sbjct: 102 TCAYAPSGNFVACGGLD-NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IIT 159
Query: 117 SSDDMLIKLWNWEKAWACQQV-FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA 175
SS D LW+ E Q V F GH+ VM + + P D TF S + D ++K+W + +
Sbjct: 160 SSGDTTCALWDIETGQ--QTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVRDS 216
Query: 176 SPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N V ++ G +G+DD +++D
Sbjct: 217 MCRQTFIGHESDINAVAFFPNGYA--FTTGSDDATCRLFD 254
Score = 132 (51.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 50/211 (23%), Positives = 92/211 (43%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQ-NVKSFEVCDLP-----VRAAKFVP 67
RS V C P+ ++ + +++ +T + NV+ +LP + +F+
Sbjct: 96 RSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLD 153
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
N I+T S D +++ T ++ F HS V +++ P ++ + D IKLW+
Sbjct: 154 -DNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK- 186
+ C+Q F GH + + P + F + S D T +++ L A + H+
Sbjct: 213 VRDSM-CRQTFIGHESDINAVAFFP-NGYAFTTGSDDATCRLFDL-RADQELLMYSHDNI 269
Query: 187 --GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
G+ V + G L++G DD IWD
Sbjct: 270 ICGITSVAFSRSGR--LLLAGYDDFNCNIWD 298
Score = 124 (48.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/156 (23%), Positives = 67/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ +++ T + H+ S +V A P+ F+ D + +++ +
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + GH V
Sbjct: 130 EGNVRVSRELPGHTGYLS--CCRFLDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDV 187
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ G +SGA D +K+WD ++ C QT
Sbjct: 188 MSLSLAPDGRT--FVSGACDASIKLWDVRDSMCRQT 221
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 189 (71.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 57/220 (25%), Positives = 99/220 (45%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + +W+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLT 116
+ P N++ G D +C +++ T E R H+ Y+ C ++T
Sbjct: 102 TCAYAPSGNFVACGGLD-NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IIT 159
Query: 117 SSDDMLIKLWNWEKAWACQQV-FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA 175
SS D LW+ E Q V F GH+ VM + + P D TF S + D ++K+W + +
Sbjct: 160 SSGDTTCALWDIETGQ--QTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVRDS 216
Query: 176 SPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N V ++ G +G+DD +++D
Sbjct: 217 MCRQTFIGHESDINAVAFFPNGYA--FTTGSDDATCRLFD 254
Score = 132 (51.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 50/211 (23%), Positives = 92/211 (43%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQ-NVKSFEVCDLP-----VRAAKFVP 67
RS V C P+ ++ + +++ +T + NV+ +LP + +F+
Sbjct: 96 RSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLD 153
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
N I+T S D +++ T ++ F HS V +++ P ++ + D IKLW+
Sbjct: 154 -DNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK- 186
+ C+Q F GH + + P + F + S D T +++ L A + H+
Sbjct: 213 VRDSM-CRQTFIGHESDINAVAFFP-NGYAFTTGSDDATCRLFDL-RADQELLMYSHDNI 269
Query: 187 --GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
G+ V + G L++G DD IWD
Sbjct: 270 ICGITSVAFSRSGR--LLLAGYDDFNCNIWD 298
Score = 124 (48.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/156 (23%), Positives = 67/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ +++ T + H+ S +V A P+ F+ D + +++ +
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + GH V
Sbjct: 130 EGNVRVSRELPGHTGYLS--CCRFLDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDV 187
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ G +SGA D +K+WD ++ C QT
Sbjct: 188 MSLSLAPDGRT--FVSGACDASIKLWDVRDSMCRQT 221
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 189 (71.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 57/220 (25%), Positives = 99/220 (45%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + +W+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLT 116
+ P N++ G D +C +++ T E R H+ Y+ C ++T
Sbjct: 102 TCAYAPSGNFVACGGLD-NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IIT 159
Query: 117 SSDDMLIKLWNWEKAWACQQV-FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA 175
SS D LW+ E Q V F GH+ VM + + P D TF S + D ++K+W + +
Sbjct: 160 SSGDTTCALWDIETGQ--QTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVRDS 216
Query: 176 SPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N V ++ G +G+DD +++D
Sbjct: 217 MCRQTFIGHESDINAVAFFPNGYA--FTTGSDDATCRLFD 254
Score = 132 (51.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 50/211 (23%), Positives = 92/211 (43%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQ-NVKSFEVCDLP-----VRAAKFVP 67
RS V C P+ ++ + +++ +T + NV+ +LP + +F+
Sbjct: 96 RSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLD 153
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
N I+T S D +++ T ++ F HS V +++ P ++ + D IKLW+
Sbjct: 154 -DNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK- 186
+ C+Q F GH + + P + F + S D T +++ L A + H+
Sbjct: 213 VRDSM-CRQTFIGHESDINAVAFFP-NGYAFTTGSDDATCRLFDL-RADQELLMYSHDNI 269
Query: 187 --GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
G+ V + G L++G DD IWD
Sbjct: 270 ICGITSVAFSRSGR--LLLAGYDDFNCNIWD 298
Score = 124 (48.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/156 (23%), Positives = 67/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ +++ T + H+ S +V A P+ F+ D + +++ +
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + GH V
Sbjct: 130 EGNVRVSRELPGHTGYLS--CCRFLDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDV 187
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ G +SGA D +K+WD ++ C QT
Sbjct: 188 MSLSLAPDGRT--FVSGACDASIKLWDVRDSMCRQT 221
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 193 (73.0 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 59/222 (26%), Positives = 109/222 (49%)
Query: 9 RKLTARSDRVK--CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+++ RS+ K C + E +++ L + + +W+ + + +K V ++
Sbjct: 199 QRIQCRSENSKGVYCLQYDDEK-IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD 257
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
R IVTGS D V V++ NT E ++ H++ V + + + ++T S D I +W
Sbjct: 258 ERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVW 313
Query: 127 NWEKAW--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+ A ++V GH V + D+ SAS DRT+KVW + TL GH
Sbjct: 314 DMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH 370
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++G+ C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 371 KRGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 408
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V++ +T E + H + C+ +++ S D I+LW+ E
Sbjct: 343 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 399
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 400 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 456
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
H V + + D+ +IS + D + IWD+ N
Sbjct: 457 VEHSGRVFRLQF----DEFQIISSSHDDTILIWDFLN 489
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAK 64
L+ + LT + V C L E ++ + V VW+ T + + + + V +
Sbjct: 238 LECLKVLTGHTGSVLC--LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 295
Query: 65 FVPRKNWIVTGSDDMQVCVFNYN-----TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
F +VT S D + V++ TL R H V V +++++S
Sbjct: 296 F--SNGLMVTCSKDRSIAVWDMASATDITLRRV--LVGHRAAVNVVDFD--DKYIVSASG 349
Query: 120 DMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
D IK+W+ C+ V GH + + +D S S D T+++W + +
Sbjct: 350 DRTIKVWSTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGAC 403
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
LEGHE+ V C+ + D ++SGA D +K+WD Q
Sbjct: 404 LRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQ 439
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 193 (73.0 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 59/222 (26%), Positives = 109/222 (49%)
Query: 9 RKLTARSDRVK--CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+++ RS+ K C + E +++ L + + +W+ + + +K V ++
Sbjct: 199 QRIQCRSENSKGVYCLQYDDEK-IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD 257
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
R IVTGS D V V++ NT E ++ H++ V + + + ++T S D I +W
Sbjct: 258 ERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVW 313
Query: 127 NWEKAW--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+ A ++V GH V + D+ SAS DRT+KVW + TL GH
Sbjct: 314 DMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH 370
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++G+ C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 371 KRGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 408
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V++ +T E + H + C+ +++ S D I+LW+ E
Sbjct: 343 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 399
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 400 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 456
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
H V + + D+ +IS + D + IWD+ N
Sbjct: 457 VEHSGRVFRLQF----DEFQIISSSHDDTILIWDFLN 489
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAK 64
L+ + LT + V C L E ++ + V VW+ T + + + + V +
Sbjct: 238 LECLKVLTGHTGSVLC--LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 295
Query: 65 FVPRKNWIVTGSDDMQVCVFNYN-----TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
F +VT S D + V++ TL R H V V +++++S
Sbjct: 296 F--SNGLMVTCSKDRSIAVWDMASATDITLRRV--LVGHRAAVNVVDFD--DKYIVSASG 349
Query: 120 DMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
D IK+W+ C+ V GH + + +D S S D T+++W + +
Sbjct: 350 DRTIKVWSTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGAC 403
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
LEGHE+ V C+ + D ++SGA D +K+WD Q
Sbjct: 404 LRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQ 439
>ZFIN|ZDB-GENE-070112-342 [details] [associations]
symbol:gnb5a "guanine nucleotide binding protein (G
protein), beta 5a" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 ZFIN:ZDB-GENE-070112-342 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE OrthoDB:EOG4XWFXZ EMBL:AL954697 EMBL:BC129375
IPI:IPI00512905 RefSeq:NP_001073650.1 UniGene:Dr.108630 SMR:A1L271
Ensembl:ENSDART00000027720 GeneID:562813 KEGG:dre:562813 CTD:562813
InParanoid:A1L271 NextBio:20884602 Uniprot:A1L271
Length = 355
Score = 189 (71.6 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 56/215 (26%), Positives = 92/215 (42%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L ++V C D + +++S +G V VW+ T + + V A + P
Sbjct: 58 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDAFTTNKEHAVTMPCTWVMACAYAP 117
Query: 68 RKNWIVTGSDDMQVCVF------NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
+ G D + V+ N N + S H++Y+ + +LTSS D
Sbjct: 118 SGCAVACGGLDNKCSVYPLSLDKNENLAAKKKSVAMHTNYLSACCFTNSDMQILTSSGDG 177
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN-NTFASASLDRTVKVWQLGSASPNFT 180
LW+ E Q F GH V+ + + P + NTF S D+ VW + + +
Sbjct: 178 TCALWDVESGQMLQS-FHGHAADVLCLDLAPSETGNTFVSGGCDKKACVWDMRTGQCVQS 236
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
E H+ +N V YY GD SG+DD +++D
Sbjct: 237 FESHDSDINSVRYYPSGDA--FASGSDDATCRLYD 269
Score = 133 (51.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 58/230 (25%), Positives = 97/230 (42%)
Query: 2 PLRLDIKRKLTARSDRVK--------CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSF 53
PL LD L A+ V CC + ++ +L S +G +W+ E+ Q ++SF
Sbjct: 135 PLSLDKNENLAAKKKSVAMHTNYLSACCFTN-SDMQILTSSGDGTCALWDVESGQMLQSF 193
Query: 54 EVCDLPVRAAKFVPRK--NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQ 111
V P + N V+G D + CV++ T + SFE+H + V +P+
Sbjct: 194 HGHAADVLCLDLAPSETGNTFVSGGCDKKACVWDMRTGQCVQSFESHDSDINSVRYYPSG 253
Query: 112 PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFA-SASL------D 164
+ SDD +L++ A ++V Y + +I + F+ S L D
Sbjct: 254 DAFASGSDDATCRLYDLR---ADREV----AIYSKESIIFGASSVDFSLSGRLLFGGYND 306
Query: 165 RTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
T+ VW + + L GHE V+ + G SG+ D ++IW
Sbjct: 307 YTINVWDVLKGARVSILFGHENRVSTLRVSPDGTA--FCSGSWDHTLRIW 354
Score = 111 (44.1 bits), Expect = 0.00061, P = 0.00061
Identities = 39/164 (23%), Positives = 64/164 (39%)
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW 128
K IV+ S D +V V++ T + H+ +V A P+ + D ++
Sbjct: 77 KRRIVSSSQDGKVIVWDAFTTNKEHAVTMPCTWVMACAYAPSGCAVACGGLDNKCSVYPL 136
Query: 129 -----EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
E A ++ HT+Y+ D S+ D T +W + S + G
Sbjct: 137 SLDKNENLAAKKKSVAMHTNYLSACCFTNSDMQILTSSG-DGTCALWDVESGQMLQSFHG 195
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
H V C+D +SG D+ +WD + CVQ+ ES
Sbjct: 196 HAADVLCLDLAPSETGNTFVSGGCDKKACVWDMRTGQCVQSFES 239
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 193 (73.0 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 59/222 (26%), Positives = 109/222 (49%)
Query: 9 RKLTARSDRVK--CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+++ RS+ K C + E +++ L + + +W+ + + +K V ++
Sbjct: 218 QRIQCRSENSKGVYCLQYDDEK-IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD 276
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
R IVTGS D V V++ NT E ++ H++ V + + + ++T S D I +W
Sbjct: 277 ERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVW 332
Query: 127 NWEKAW--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+ A ++V GH V + D+ SAS DRT+KVW + TL GH
Sbjct: 333 DMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH 389
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++G+ C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 390 KRGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 427
Score = 134 (52.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V++ +T E + H + C+ +++ S D I+LW+ E
Sbjct: 362 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 418
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 419 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 475
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
H V + + D+ +IS + D + IWD+ N
Sbjct: 476 VEHSGRVFRLQF----DEFQIISSSHDDTILIWDFLN 508
Score = 134 (52.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAK 64
L+ + LT + V C L E ++ + V VW+ T + + + + V +
Sbjct: 257 LECLKVLTGHTGSVLC--LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 314
Query: 65 FVPRKNWIVTGSDDMQVCVFNYN-----TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
F +VT S D + V++ TL R H V V +++++S
Sbjct: 315 F--SNGLMVTCSKDRSIAVWDMASATDITLRRV--LVGHRAAVNVVDFD--DKYIVSASG 368
Query: 120 DMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
D IK+W+ C+ V GH + + +D S S D T+++W + +
Sbjct: 369 DRTIKVWSTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGAC 422
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
LEGHE+ V C+ + D ++SGA D +K+WD Q
Sbjct: 423 LRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQ 458
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 188 (71.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 51/188 (27%), Positives = 91/188 (48%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
+W+ + + +K+ + V F P+ N IV+GS D V +++ T + + AHSD
Sbjct: 113 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD 172
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
V V + +++SS D L ++W+ + + + V + +P A
Sbjct: 173 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA- 231
Query: 161 ASLDRTVKVWQL--GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
A+LD T+K+W G +T +EK ++ G K +++SG++D LV IW+ Q
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQT 290
Query: 219 KTCVQTLE 226
K VQ L+
Sbjct: 291 KEVVQKLQ 298
Score = 187 (70.9 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 47/219 (21%), Positives = 96/219 (43%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+K L + V P W+ +S + + +W + K+ L + +
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
N +V+ SDD + +++ ++ + + + HS+YV C +P +++ S D +++W
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL-EGHE 185
+ K C + H+ V + N +D + S+S D ++W S TL +
Sbjct: 157 D-VKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
V+ V + G Y+++ D +K+WDY C++T
Sbjct: 215 PPVSFVKFSPNGK--YILAATLDNTLKLWDYSKGKCLKT 251
Score = 159 (61.0 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 42/169 (24%), Positives = 87/169 (51%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLP-VRAAKFVP 67
+ L A SD V + +++S Y+G +W+ + Q +K+ D P V KF P
Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 224
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP---FLLTSSDDMLIK 124
+I+ + D + +++Y+ + ++ H + C+ + + ++++ S+D L+
Sbjct: 225 NGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASL--DRTVKVWQ 171
+WN + Q++ +GHT V+ +P +N ASA+L D+T+K+W+
Sbjct: 285 IWNLQTKEVVQKL-QGHTDVVISTACHPTEN-IIASAALENDKTIKLWK 331
Score = 139 (54.0 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 28/87 (32%), Positives = 48/87 (55%)
Query: 140 GHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDK 199
GHT V + +P + AS+S D+ +K+W T+ GH+ G++ V + D
Sbjct: 43 GHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW--SSDS 99
Query: 200 PYLISGADDRLVKIWDYQNKTCVQTLE 226
L+S +DD+ +KIWD + C++TL+
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLK 126
Score = 130 (50.8 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 46/211 (21%), Positives = 92/211 (43%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
+ L S+ V CC+ +P +++ ++ V +W+ +T + +K+ PV A F
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 182
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSF-EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
+ IV+ S D +++ + + + + + V V P ++L ++ D +KLW+
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Query: 128 WEKAWACQQVFEGHTH--YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
+ K C + + H + Y + + S S D V +W L + L+GH
Sbjct: 243 YSKG-KCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHT 301
Query: 186 KGVNCVDYYHGGDKPYLISGA--DDRLVKIW 214
V H + + S A +D+ +K+W
Sbjct: 302 DVVISTAC-HPTEN-IIASAALENDKTIKLW 330
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 193 (73.0 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 59/222 (26%), Positives = 109/222 (49%)
Query: 9 RKLTARSDRVK--CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+++ RS+ K C + E +++ L + + +W+ + + +K V ++
Sbjct: 219 QRIQCRSENSKGVYCLQYDDEK-IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD 277
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
R IVTGS D V V++ NT E ++ H++ V + + + ++T S D I +W
Sbjct: 278 ERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVW 333
Query: 127 NWEKAW--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+ A ++V GH V + D+ SAS DRT+KVW + TL GH
Sbjct: 334 DMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH 390
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++G+ C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 391 KRGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 428
Score = 134 (52.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V++ +T E + H + C+ +++ S D I+LW+ E
Sbjct: 363 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 419
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 420 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 476
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
H V + + D+ +IS + D + IWD+ N
Sbjct: 477 VEHSGRVFRLQF----DEFQIISSSHDDTILIWDFLN 509
Score = 134 (52.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAK 64
L+ + LT + V C L E ++ + V VW+ T + + + + V +
Sbjct: 258 LECLKVLTGHTGSVLC--LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 315
Query: 65 FVPRKNWIVTGSDDMQVCVFNYN-----TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
F +VT S D + V++ TL R H V V +++++S
Sbjct: 316 F--SNGLMVTCSKDRSIAVWDMASATDITLRRV--LVGHRAAVNVVDFD--DKYIVSASG 369
Query: 120 DMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
D IK+W+ C+ V GH + + +D S S D T+++W + +
Sbjct: 370 DRTIKVWSTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGAC 423
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
LEGHE+ V C+ + D ++SGA D +K+WD Q
Sbjct: 424 LRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQ 459
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 193 (73.0 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 59/222 (26%), Positives = 109/222 (49%)
Query: 9 RKLTARSDRVK--CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+++ RS+ K C + E +++ L + + +W+ + + +K V ++
Sbjct: 231 QRIQCRSENSKGVYCLQYDDEK-IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD 289
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
R IVTGS D V V++ NT E ++ H++ V + + + ++T S D I +W
Sbjct: 290 ERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVW 345
Query: 127 NWEKAW--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+ A ++V GH V + D+ SAS DRT+KVW + TL GH
Sbjct: 346 DMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH 402
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++G+ C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 403 KRGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 440
Score = 134 (52.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V++ +T E + H + C+ +++ S D I+LW+ E
Sbjct: 375 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 431
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 432 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 488
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
H V + + D+ +IS + D + IWD+ N
Sbjct: 489 VEHSGRVFRLQF----DEFQIISSSHDDTILIWDFLN 521
Score = 134 (52.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAK 64
L+ + LT + V C L E ++ + V VW+ T + + + + V +
Sbjct: 270 LECLKVLTGHTGSVLC--LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 327
Query: 65 FVPRKNWIVTGSDDMQVCVFNYN-----TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
F +VT S D + V++ TL R H V V +++++S
Sbjct: 328 F--SNGLMVTCSKDRSIAVWDMASATDITLRRV--LVGHRAAVNVVDFD--DKYIVSASG 381
Query: 120 DMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
D IK+W+ C+ V GH + + +D S S D T+++W + +
Sbjct: 382 DRTIKVWSTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGAC 435
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
LEGHE+ V C+ + D ++SGA D +K+WD Q
Sbjct: 436 LRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQ 471
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 193 (73.0 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 59/222 (26%), Positives = 109/222 (49%)
Query: 9 RKLTARSDRVK--CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+++ RS+ K C + E +++ L + + +W+ + + +K V ++
Sbjct: 231 QRIQCRSENSKGVYCLQYDDEK-IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD 289
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
R IVTGS D V V++ NT E ++ H++ V + + + ++T S D I +W
Sbjct: 290 ERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVW 345
Query: 127 NWEKAW--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+ A ++V GH V + D+ SAS DRT+KVW + TL GH
Sbjct: 346 DMASATDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH 402
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++G+ C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 403 KRGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 440
Score = 134 (52.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V++ +T E + H + C+ +++ S D I+LW+ E
Sbjct: 375 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 431
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 432 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 488
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
H V + + D+ +IS + D + IWD+ N
Sbjct: 489 VEHSGRVFRLQF----DEFQIISSSHDDTILIWDFLN 521
Score = 134 (52.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAK 64
L+ + LT + V C L E ++ + V VW+ T + + + + V +
Sbjct: 270 LECLKVLTGHTGSVLC--LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 327
Query: 65 FVPRKNWIVTGSDDMQVCVFNYN-----TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
F +VT S D + V++ TL R H V V +++++S
Sbjct: 328 F--SNGLMVTCSKDRSIAVWDMASATDITLRRV--LVGHRAAVNVVDFD--DKYIVSASG 381
Query: 120 DMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
D IK+W+ C+ V GH + + +D S S D T+++W + +
Sbjct: 382 DRTIKVWSTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGAC 435
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
LEGHE+ V C+ + D ++SGA D +K+WD Q
Sbjct: 436 LRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQ 471
>UNIPROTKB|E1BVN4 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 EMBL:AADN02045388
EMBL:AADN02045389 IPI:IPI00572484 RefSeq:XP_413801.2
ProteinModelPortal:E1BVN4 Ensembl:ENSGALT00000007455 GeneID:415417
KEGG:gga:415417 NextBio:20819029 Uniprot:E1BVN4
Length = 395
Score = 190 (71.9 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 57/215 (26%), Positives = 93/215 (43%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L ++V C D + +++S +G V VW+ T + + V A + P
Sbjct: 98 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAP 157
Query: 68 RKNWIVTGSDDMQVCVF------NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
I G D + V+ N N + S H++Y+ + + +LT+S D
Sbjct: 158 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG 217
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN-NTFASASLDRTVKVWQLGSASPNFT 180
LW+ E Q F GH V+ + + P + NTF S D+ VW + S +
Sbjct: 218 TCALWDVESGQLLQS-FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQS 276
Query: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
E H+ +N V YY GD SG+DD +++D
Sbjct: 277 FETHDSDINSVRYYPSGDA--FASGSDDATCRLYD 309
Score = 125 (49.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/157 (23%), Positives = 68/157 (43%)
Query: 18 VKCCDLHPTEPW--MLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTG 75
V C DL P+E ++ + VW+ + Q ++SFE D + + ++ P + +G
Sbjct: 240 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQSFETHDSDINSVRYYPSGDAFASG 299
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSDDMLIKLWNWEKAWA 133
SDD +++ + S +V + L +D I +W+ K
Sbjct: 300 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR 359
Query: 134 CQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVW 170
+F GH + V + ++P D F S S D T+++W
Sbjct: 360 VSILF-GHENRVSTLRVSP-DGTAFCSGSWDHTLRIW 394
Score = 110 (43.8 bits), Expect = 0.00094, P = 0.00094
Identities = 38/159 (23%), Positives = 67/159 (42%)
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQP--FLLTSSD 119
A F I+T S D +++ + + SF H V C+ + P++ ++
Sbjct: 200 ACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC 259
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D +W+ ++ C Q FE H + + P + FAS S D T +++ L A
Sbjct: 260 DKKAMVWDM-RSGQCIQSFETHDSDINSVRYYPS-GDAFASGSDDATCRLYDL-RADREV 316
Query: 180 TLEGHEK---GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ E G + VD+ G L +G +D + +WD
Sbjct: 317 AIYSKESIIFGASSVDFSLSGR--LLFAGYNDYTINVWD 353
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 188 (71.2 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 54/219 (24%), Positives = 95/219 (43%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + +W+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLT 116
+ P N++ G D +C +++ T E R H+ Y+ C ++T
Sbjct: 102 TCAYAPSGNYVACGGLD-NICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVT 159
Query: 117 SSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
SS D LW+ E F GHT VM + + P D F S + D + K+W +
Sbjct: 160 SSGDTTCALWDIETGQQTT-TFAGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDIREGM 217
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ +G+DD +++D
Sbjct: 218 CRQTFTGHESDINAICFFPNGNA--FATGSDDATCRLFD 254
Score = 123 (48.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 36/156 (23%), Positives = 66/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ +++ T + H+ S +V A P+ ++ D + +++ +
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYSLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + T GH V
Sbjct: 130 EGNVRVSRELAGHTGYLS--CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDV 187
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ D +SGA D K+WD + C QT
Sbjct: 188 MSLSL--APDTRLFVSGACDASAKLWDIREGMCRQT 221
Score = 109 (43.4 bits), Expect = 0.00097, P = 0.00097
Identities = 44/212 (20%), Positives = 79/212 (37%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+ R+L + + CC ++ S + +W+ ET Q +F V +
Sbjct: 135 VSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLA 193
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P V+G+ D +++ +F H + + P T SDD +L+
Sbjct: 194 PDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLF 253
Query: 127 NWEKAWACQQVFE-GHTHYVMQI--VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+ A Q++ H + + I V K + D VW A L G
Sbjct: 254 DLR---ADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAG 310
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
H+ V+C+ G + +G+ D +KIW+
Sbjct: 311 HDNRVSCLGVTDDGMA--VATGSWDSFLKIWN 340
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 194 (73.4 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 51/213 (23%), Positives = 91/213 (42%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
K L + V + P + ++L+ +G +W+ +T + + + P+ +F P
Sbjct: 396 KSSLIGHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSP 455
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
+ T S D +++ F H + V CV+ HP +L T S D ++W+
Sbjct: 456 FGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWD 515
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
+ +VF H H + + D + ASA +KVW L S++ + + H
Sbjct: 516 -VRTGGTVRVFNAH-HSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSI 573
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWD--YQN 218
V + + + D L+SG D V WD Y+N
Sbjct: 574 VYSLSFSY--DNKILVSGGADTDVNFWDLTYRN 604
Score = 155 (59.6 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 35/134 (26%), Positives = 67/134 (50%)
Query: 94 SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPK 153
S H+ V V++ P + F+L+ S+D +LW+ + + + GH + + +P
Sbjct: 398 SLIGHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVK-YAGHNAPIWDVQFSPF 456
Query: 154 DNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
FA+AS D+T ++W + A+P GH+ V+CV ++ YL +G+ D ++
Sbjct: 457 -GYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNA--AYLATGSSDHTTRM 513
Query: 214 WDYQNKTCVQTLES 227
WD + V+ +
Sbjct: 514 WDVRTGGTVRVFNA 527
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 195 (73.7 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 48/192 (25%), Positives = 88/192 (45%)
Query: 25 PTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVF 84
P ++L+S +G + +W+ +T + ++ + PV +F P + V+G D ++
Sbjct: 509 PDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLW 568
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
+ + F H V C HP ++ T S D ++LW+ C ++F GH
Sbjct: 569 ATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNG-NCVRIFTGHKGP 627
Query: 145 VMQIVINPKDNNTF-ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
+ + +P N F AS S D V +W +G L+GH + + + G+ +
Sbjct: 628 IHSLAFSP--NGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGE--IIA 683
Query: 204 SGADDRLVKIWD 215
SG+ D V++WD
Sbjct: 684 SGSIDNTVRLWD 695
Score = 187 (70.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 48/177 (27%), Positives = 79/177 (44%)
Query: 47 NQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVA 106
+ V+ + V +R K N I SDD+ + + T HS V V+
Sbjct: 447 DSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVS 506
Query: 107 VHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRT 166
P + +LL+SS+D I+LW+ + + C ++GH + V +P F S DR
Sbjct: 507 FSPDRNYLLSSSEDGTIRLWSLQ-TFTCLVGYKGHNYPVWDTQFSPF-GYYFVSGGHDRV 564
Query: 167 VKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
++W P GH V C ++ + Y+ +G+ DR V++WD N CV+
Sbjct: 565 ARLWATDHYQPLRIFAGHLADVTCTRFHPNSN--YVATGSSDRTVRLWDVLNGNCVR 619
Score = 146 (56.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 42/177 (23%), Positives = 84/177 (47%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
+ + +T+ K PV F P +N++++ S+D + +++ T ++ H+
Sbjct: 483 IMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNY 542
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
V P + ++ D + +LW + + ++F GH V +P ++N A+
Sbjct: 543 PVWDTQFSPFGYYFVSGGHDRVARLWATDH-YQPLRIFAGHLADVTCTRFHP-NSNYVAT 600
Query: 161 ASLDRTVKVWQL--GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
S DRTV++W + G+ FT GH+ ++ + + G +L SG+ D V +WD
Sbjct: 601 GSSDRTVRLWDVLNGNCVRIFT--GHKGPIHSLAFSPNGK--FLASGSTDGRVLLWD 653
Score = 131 (51.2 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 36/139 (25%), Positives = 61/139 (43%)
Query: 37 GHVHV---WNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFH 93
GH V W + Q ++ F V +F P N++ TGS D V +++
Sbjct: 560 GHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVR 619
Query: 94 SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPK 153
F H + +A P FL + S D + LW+ ++ +GHT + + + +
Sbjct: 620 IFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAEL-KGHTGTIYALKFS-R 677
Query: 154 DNNTFASASLDRTVKVWQL 172
D AS S+D TV++W +
Sbjct: 678 DGEIIASGSIDNTVRLWDV 696
>UNIPROTKB|F1NLV4 [details] [associations]
symbol:GNB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001750 "photoreceptor outer segment" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0005834 GeneTree:ENSGT00550000074331
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:AADN02040871
IPI:IPI00596111 Ensembl:ENSGALT00000002040
Ensembl:ENSGALT00000040376 Uniprot:F1NLV4
Length = 403
Score = 190 (71.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 55/219 (25%), Positives = 95/219 (43%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + +W+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLT 116
+ P N++ G D +C ++N T E R H+ Y+ C ++T
Sbjct: 102 TCAYAPSGNYVACGGLD-NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVT 159
Query: 117 SSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
SS D LW+ E F GHT VM + + P D F S + D + K+W +
Sbjct: 160 SSGDTTCALWDIETGQQTT-TFTGHTGDVMSLSLAP-DARCFVSGACDASAKLWDVREGM 217
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N + ++ G+ +G+DD +++D
Sbjct: 218 CRQTFTGHESDINAICFFPNGNA--FATGSDDATCRLFD 254
Score = 147 (56.8 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 52/209 (24%), Positives = 94/209 (44%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQ-NVK-SFEVCDLP--VRAAKFVPRK 69
RS V C P+ ++ + ++N +T + NV+ S E+ + +F+
Sbjct: 96 RSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-D 154
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
N IVT S D +++ T ++ +F H+ V +++ P ++ + D KLW+
Sbjct: 155 NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAKLWDVR 214
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK--- 186
+ C+Q F GH + I P + N FA+ S D T +++ L A + H+
Sbjct: 215 EGM-CRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDL-RADQELMVYSHDNIIC 271
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
G+ V + G L++G DD +WD
Sbjct: 272 GITSVAFSKSGR--LLLAGYDDFNCNVWD 298
Score = 127 (49.8 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 37/156 (23%), Positives = 66/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ +++ T + H+ S +V A P+ ++ D + ++N +
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + T GH V
Sbjct: 130 EGNVRVSRELAGHTGYLS--CCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ D +SGA D K+WD + C QT
Sbjct: 188 MSLSL--APDARCFVSGACDASAKLWDVREGMCRQT 221
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 194 (73.4 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 55/230 (23%), Positives = 108/230 (46%)
Query: 2 PLRLDIKRKLTARSDRVK----CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCD 57
P+ R + S++VK C P ++ +G +WN T + D
Sbjct: 108 PITSVCSRFIHTSSNKVKYPINCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHD 167
Query: 58 LPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDY-VRCVAVHPTQPFLLT 116
VR+ + ++W+V+G D + + N + F+AH +R ++ PT L +
Sbjct: 168 SAVRSIIWSHNEDWMVSGDDSGNIKYWQPN-MNNVKIFKAHEQSKIRGLSFSPTDLKLAS 226
Query: 117 SSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
+DD +IK+W++ + Q+ GH V + +P+ + S D +K+W S+
Sbjct: 227 CADDKIIKIWDFARCTEDNQLV-GHGWDVKCVSWHPQ-KSLIVSGGKDNNIKIWDAKSSQ 284
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
TL GH+ V+ V++ G+ +++S + D+L+K++D + +QT +
Sbjct: 285 NITTLHGHKSTVSKVEWNQNGN--WIVSASSDQLLKVFDIRTMKEMQTFK 332
Score = 175 (66.7 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 51/213 (23%), Positives = 94/213 (44%)
Query: 3 LRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLP-VR 61
L + + L A V+ E WM++ +G++ W N NVK F+ + +R
Sbjct: 155 LTFNFETILQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYWQPNMN-NVKIFKAHEQSKIR 213
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
F P + + +DD + ++++ + H V+CV+ HP + +++ D
Sbjct: 214 GLSFSPTDLKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDN 273
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL 181
IK+W+ K+ GH V ++ N ++ N SAS D+ +KV+ + + T
Sbjct: 274 NIKIWD-AKSSQNITTLHGHKSTVSKVEWN-QNGNWIVSASSDQLLKVFDIRTMKEMQTF 331
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
+GH K V + H + +SG D + W
Sbjct: 332 KGHGKEVTALAL-HPYHEDLFVSGDKDGKILYW 363
Score = 165 (63.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 40/154 (25%), Positives = 70/154 (45%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSD 77
VKC HP + +++ + ++ +W+ +++QN+ + V ++ NWIV+ S
Sbjct: 254 VKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASS 313
Query: 78 DMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD-DMLIKLWNWEKAWACQQ 136
D + VF+ T++ +F+ H V +A+HP L S D D I W +
Sbjct: 314 DQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYWIVGNPEPQAE 373
Query: 137 VFEGHTHYVMQIVINPKDNNTFASASLDRTVKVW 170
+ H V + +P + AS S D T K W
Sbjct: 374 IHSAHDADVWSLSWHPI-GHILASGSNDHTTKFW 406
Score = 143 (55.4 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 35/156 (22%), Positives = 73/156 (46%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
V+ + P+K+ IV+G D + +++ + + + H V V + +++++S
Sbjct: 254 VKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASS 313
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D L+K+++ + Q F+GH V + ++P + F S D + W +G+ P
Sbjct: 314 DQLLKVFDI-RTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYWIVGNPEPQA 372
Query: 180 TLEG-HEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
+ H+ V + ++ G L SG++D K W
Sbjct: 373 EIHSAHDADVWSLSWHPIGH--ILASGSNDHTTKFW 406
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 194 (73.4 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 53/218 (24%), Positives = 101/218 (46%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V C + +E ++A +G + +W+ E + +++ + + F P
Sbjct: 59 LTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGE 118
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
++ +GS D + +++ ++ H+ VRC+A P +L ++SDD +KLW+
Sbjct: 119 YLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIA 178
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
+ F HT V + +P + AS S DRTVK+W L + + EG V
Sbjct: 179 GKMITE-FTSHTSAVNVVQFHPNEY-LLASGSADRTVKLWDLEKFNMIGSSEGETGVVRS 236
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
V + G Y SG+++ L +++ ++ C + G
Sbjct: 237 VLFNPDGSCLY--SGSENTL-RVYGWEPDRCFDVVHVG 271
Score = 179 (68.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 60/222 (27%), Positives = 97/222 (43%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNG-HVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+++ A S V L + +LA+ V++W + S V +F
Sbjct: 14 QEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNS 73
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
+ +V GS + +++ + + H + + HP +L + S D IKLW+
Sbjct: 74 SEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWD 133
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL--GSASPNFTLEGHE 185
+ C ++GHT V + +P D ASAS D TVK+W L G FT H
Sbjct: 134 VRRK-GCVFRYKGHTQAVRCLAFSP-DGKWLASASDDSTVKLWDLIAGKMITEFT--SHT 189
Query: 186 KGVNCVDYYHGGDKPYLI-SGADDRLVKIWDYQNKTCVQTLE 226
VN V + H + YL+ SG+ DR VK+WD + + + E
Sbjct: 190 SAVNVVQF-HPNE--YLLASGSADRTVKLWDLEKFNMIGSSE 228
Score = 160 (61.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 42/164 (25%), Positives = 73/164 (44%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
I R L + D HP ++ + + ++ +W+ V ++ VR F
Sbjct: 97 ILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFS 156
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P W+ + SDD V +++ + F +H+ V V HP + L + S D +KLW
Sbjct: 157 PDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLW 216
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVW 170
+ EK + EG T V ++ NP D + S S + T++V+
Sbjct: 217 DLEK-FNMIGSSEGETGVVRSVLFNP-DGSCLYSGS-ENTLRVY 257
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 188 (71.2 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 49/166 (29%), Positives = 79/166 (47%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
+ A KF P ++ T S D V ++N + L + H V A ++T+SD
Sbjct: 82 ISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASD 141
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D +K++ + +GHT+YV NP+ ++ S S D +V++W + +
Sbjct: 142 DKTLKIYEVPTV-KMAKTLKGHTNYVFCCNFNPQ-SSLVVSGSFDESVRIWDVRTGMCVK 199
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
TL H V+ V + G + SG+ D LV+IWD N CV+TL
Sbjct: 200 TLPAHSDPVSAVSFNRDGS--LITSGSYDGLVRIWDTANGQCVKTL 243
Score = 183 (69.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 45/169 (26%), Positives = 83/169 (49%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
V F P+ + +V+GS D V +++ T + AHSD V V+ + + + S
Sbjct: 166 VFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSY 225
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D L+++W+ + + + V + +P + S++LD T+K+W G
Sbjct: 226 DGLVRIWDTANGQCVKTLVDDENPPVAFVKFSP-NGKYILSSNLDNTLKLWDFGKGKTLK 284
Query: 180 TLEGHEKGVNCV--DYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+GHE C+ ++ G K ++ISG++D + +W+ Q K VQ+LE
Sbjct: 285 QYQGHENNKYCIFANFSVTGGK-WIISGSEDCKIYVWNLQTKEVVQSLE 332
Score = 176 (67.0 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 40/132 (30%), Positives = 68/132 (51%)
Query: 94 SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPK 153
+ E H+ + V P FL TSS D +K+WN +C++ GH V +
Sbjct: 74 TIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDL-SCERTLTGHKLGVNDFAWSA- 131
Query: 154 DNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
D+ + +AS D+T+K++++ + TL+GH V C ++ ++SG+ D V+I
Sbjct: 132 DSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNF--NPQSSLVVSGSFDESVRI 189
Query: 214 WDYQNKTCVQTL 225
WD + CV+TL
Sbjct: 190 WDVRTGMCVKTL 201
Score = 158 (60.7 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 45/187 (24%), Positives = 82/187 (43%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
V +WN ++ L V + IVT SDD + ++ T++ + + H
Sbjct: 103 VKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGH 162
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
++YV C +P +++ S D +++W+ + C + H+ V + N +D +
Sbjct: 163 TNYVFCCNFNPQSSLVVSGSFDESVRIWD-VRTGMCVKTLPAHSDPVSAVSFN-RDGSLI 220
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKG-VNCVDYYHGGDKPYLISGADDRLVKIWDY- 216
S S D V++W + TL E V V + G Y++S D +K+WD+
Sbjct: 221 TSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGK--YILSSNLDNTLKLWDFG 278
Query: 217 QNKTCVQ 223
+ KT Q
Sbjct: 279 KGKTLKQ 285
Score = 155 (59.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 51/211 (24%), Positives = 95/211 (45%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
+ L ++ V CC+ +P +++ ++ V +W+ T VK+ PV A F
Sbjct: 157 KTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRD 216
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSF-EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
+ I +GS D V +++ + + + + V V P ++L+S+ D +KLW+
Sbjct: 217 GSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWD 276
Query: 128 WEKAWACQQVFEGHTH--YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
+ K +Q ++GH + Y + + S S D + VW L + +LEGH
Sbjct: 277 FGKGKTLKQ-YQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHT 335
Query: 186 KGVNCVDYYHGGDKPYLISGA--DDRLVKIW 214
+ V D + + + SGA D ++IW
Sbjct: 336 QAVIASDCHPMQNM--IASGALEPDNTIRIW 364
Score = 130 (50.8 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 27/88 (30%), Positives = 47/88 (53%)
Query: 139 EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGD 198
EGHT + + +P ++S D+TVK+W + S TL GH+ GVN D+ D
Sbjct: 76 EGHTKSISAVKFSPC-GKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVN--DFAWSAD 132
Query: 199 KPYLISGADDRLVKIWDYQNKTCVQTLE 226
+++ +DD+ +KI++ +TL+
Sbjct: 133 SKSIVTASDDKTLKIYEVPTVKMAKTLK 160
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 191 (72.3 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 55/171 (32%), Positives = 87/171 (50%)
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYNT--LER---FHS---FEAHSDYVRCVAVHPTQPFLL 115
KF P +++TGS D + V++YNT L + + S F H D + C+A FL
Sbjct: 232 KFSPDSKYLLTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMHDDAILCIAFSKDGEFLA 291
Query: 116 TSSDDMLIKLWNWEKAWACQQVFE-GHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
T S D IK+W K+ C + FE HT+ V + + +++ S S D ++K+ L S
Sbjct: 292 TGSLDNKIKVWQI-KSGKCLRKFEPAHTNGVTCLQFS-RNSTQILSGSFDSSLKIHGLKS 349
Query: 175 ASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
GH+ VN + H D+ +IS + D +KIWD ++ C+QT+
Sbjct: 350 GKALKIFRGHQSFVNDCCFNHDEDR--VISCSSDGKIKIWDAKSSDCLQTI 398
Score = 126 (49.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 39/160 (24%), Positives = 70/160 (43%)
Query: 25 PTEPWMLASLYNGHVHVWNHETNQNVKS--------FEVCDLPVRAAKFVPRKNWIVTGS 76
P ++L +G + VW++ T + KS F + D + F ++ TGS
Sbjct: 235 PDSKYLLTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMHDDAILCIAFSKDGEFLATGS 294
Query: 77 DDMQVCVFNYNTLERFHSFE-AHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQ 135
D ++ V+ + + FE AH++ V C+ +L+ S D +K+ + A +
Sbjct: 295 LDNKIKVWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQILSGSFDSSLKIHGLKSGKALK 354
Query: 136 QVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA 175
+F GH +V N D + S S D +K+W S+
Sbjct: 355 -IFRGHQSFVNDCCFN-HDEDRVISCSSDGKIKIWDAKSS 392
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 190 (71.9 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 63/223 (28%), Positives = 99/223 (44%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+K LT V+ + P P++ + + V W+ ETN+ ++ + V A K
Sbjct: 197 LKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLH 256
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P + +VT D V++ T + H H V +AV P ++T S D I+LW
Sbjct: 257 PTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLW 316
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL--GSASPNFTLEGH 184
+ A H V + ++P D TFAS S D +K W+ G+ NF EGH
Sbjct: 317 DLA-AGKTLTTLTHHKKTVRALSLHP-DEFTFASGSSDN-IKHWKFPEGAFMGNF--EGH 371
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
VN + D + SGAD+ + WD+++ Q L+S
Sbjct: 372 NAIVNTLSI--NSDN-VMFSGADNGSMCFWDWKSGHKYQELQS 411
Score = 164 (62.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 44/210 (20%), Positives = 86/210 (40%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+ R ++ V+C D+ P W + + +W+ + + VR
Sbjct: 155 LMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVS 214
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
PR ++ + +D V ++ T + + H V + +HPT L+T+ D + ++W
Sbjct: 215 PRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVW 274
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
+ V GH V + + D + S+D T+++W L + TL H+K
Sbjct: 275 DMRTRQNVH-VLSGHKSTVASLAVQEFDPQV-VTGSMDSTIRLWDLAAGKTLTTLTHHKK 332
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDY 216
V + + D+ SG+ D +K W +
Sbjct: 333 TVRALSLHP--DEFTFASGSSDN-IKHWKF 359
Score = 151 (58.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 38/166 (22%), Positives = 72/166 (43%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
VR P W TG+ D + +++ + + H VR +AV P P+L + +
Sbjct: 166 VRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGE 225
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D ++K W+ E + + GH V + ++P + +A D +VW + +
Sbjct: 226 DKMVKCWDLETNKVIRH-YHGHLSGVYALKLHPT-LDVLVTAGRDAVARVWDMRTRQNVH 283
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
L GH+ V + P +++G+ D +++WD + TL
Sbjct: 284 VLSGHKSTVASLAVQEFD--PQVVTGSMDSTIRLWDLAAGKTLTTL 327
Score = 146 (56.5 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 34/95 (35%), Positives = 46/95 (48%)
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
W W +V GH +V + + P N F + + DRT+K+W L S TL GH
Sbjct: 149 WHAPWTLMRVISGHLGWVRCVDVEP-GNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIAT 207
Query: 188 VN--CVDYYHGGDKPYLISGADDRLVKIWDYQ-NK 219
V V H PYL S +D++VK WD + NK
Sbjct: 208 VRGLAVSPRH----PYLFSCGEDKMVKCWDLETNK 238
Score = 133 (51.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/141 (28%), Positives = 61/141 (43%)
Query: 88 TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQ 147
TL R S H +VRCV V P + T + D IK+W+ + GH V
Sbjct: 154 TLMRVIS--GHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASG-VLKLTLTGHIATVRG 210
Query: 148 IVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGAD 207
+ ++P+ F S D+ VK W L + GH GV + + D L++
Sbjct: 211 LAVSPRHPYLF-SCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLD--VLVTAGR 267
Query: 208 DRLVKIWDYQNKTCVQTLESG 228
D + ++WD + + V L SG
Sbjct: 268 DAVARVWDMRTRQNVHVL-SG 287
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 176 (67.0 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 46/157 (29%), Positives = 78/157 (49%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
I+TGS D V V++ N E ++ H + V + + ++T S D I +W+
Sbjct: 356 IITGSSDSTVRVWDVNAGEMLNTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASP 413
Query: 132 W--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
++V GH V + D+ SAS DRT+KVW + TL GH++G+
Sbjct: 414 TDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 470
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 471 CLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 503
Score = 154 (59.3 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 42/158 (26%), Positives = 74/158 (46%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
IV+G D + +++ +TLE H+ V C+ + ++T S D +++W+
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNAG 373
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE----GHEKG 187
+ H V+ + N N + S DR++ VW + S + + TL GH
Sbjct: 374 EMLNTLIH-HCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPT-DITLRRVLVGHRAA 428
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
VN VD+ D Y++S + DR +K+W+ V+TL
Sbjct: 429 VNVVDF----DDKYIVSASGDRTIKVWNTSTCEFVRTL 462
Score = 144 (55.7 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 57/219 (26%), Positives = 94/219 (42%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSF-EVCDLPVRAA 63
L+ KR LT + V C L E ++ + V VW+ + + + C+ V
Sbjct: 333 LECKRILTGHTGSVLC--LQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEA-VLHL 389
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYN-----TLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
+F +VT S D + V++ TL R H V V +++++S
Sbjct: 390 RF--NNGMMVTCSKDRSIAVWDMASPTDITLRRV--LVGHRAAVNVVDFD--DKYIVSAS 443
Query: 119 DDMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
D IK+WN C+ V GH + + +D S S D T+++W + +
Sbjct: 444 GDRTIKVWNTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGA 497
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
LEGHE+ V C+ + D ++SGA D +K+WD
Sbjct: 498 CLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWD 532
Score = 137 (53.3 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V+N +T E + H + C+ +++ S D I+LW+ E
Sbjct: 438 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 494
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 495 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTL 551
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
H V + + D+ ++S + D + IWD+ N
Sbjct: 552 VEHSGRVFRLQF----DEFQIVSSSHDDTILIWDFLN 584
Score = 39 (18.8 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 21/77 (27%), Positives = 31/77 (40%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI- 72
RS + C L + P L LYN QN E C+ K +P KN +
Sbjct: 21 RSLWLGCSSLADSMP-SLRCLYNPGTGALT--AFQNSSEREDCNNGEPPRKIIPEKNSLR 77
Query: 73 VTGSDDMQVCVFNYNTL 89
T + ++C+ N T+
Sbjct: 78 QTYNSCARLCI-NQETV 93
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 176 (67.0 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 46/157 (29%), Positives = 78/157 (49%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
I+TGS D V V++ N E ++ H + V + + ++T S D I +W+
Sbjct: 356 IITGSSDSTVRVWDVNAGEMLNTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASP 413
Query: 132 W--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
++V GH V + D+ SAS DRT+KVW + TL GH++G+
Sbjct: 414 TDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 470
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 471 CLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 503
Score = 154 (59.3 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 42/158 (26%), Positives = 74/158 (46%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
IV+G D + +++ +TLE H+ V C+ + ++T S D +++W+
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNAG 373
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE----GHEKG 187
+ H V+ + N N + S DR++ VW + S + + TL GH
Sbjct: 374 EMLNTLIH-HCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPT-DITLRRVLVGHRAA 428
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
VN VD+ D Y++S + DR +K+W+ V+TL
Sbjct: 429 VNVVDF----DDKYIVSASGDRTIKVWNTSTCEFVRTL 462
Score = 144 (55.7 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 57/219 (26%), Positives = 94/219 (42%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSF-EVCDLPVRAA 63
L+ KR LT + V C L E ++ + V VW+ + + + C+ V
Sbjct: 333 LECKRILTGHTGSVLC--LQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEA-VLHL 389
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYN-----TLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
+F +VT S D + V++ TL R H V V +++++S
Sbjct: 390 RF--NNGMMVTCSKDRSIAVWDMASPTDITLRRV--LVGHRAAVNVVDFD--DKYIVSAS 443
Query: 119 DDMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
D IK+WN C+ V GH + + +D S S D T+++W + +
Sbjct: 444 GDRTIKVWNTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGA 497
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
LEGHE+ V C+ + D ++SGA D +K+WD
Sbjct: 498 CLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWD 532
Score = 137 (53.3 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V+N +T E + H + C+ +++ S D I+LW+ E
Sbjct: 438 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 494
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 495 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTL 551
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
H V + + D+ ++S + D + IWD+ N
Sbjct: 552 VEHSGRVFRLQF----DEFQIVSSSHDDTILIWDFLN 584
Score = 39 (18.8 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 21/77 (27%), Positives = 31/77 (40%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI- 72
RS + C L + P L LYN QN E C+ K +P KN +
Sbjct: 21 RSLWLGCSSLADSMP-SLRCLYNPGTGALT--AFQNSSEREDCNNGEPPRKIIPEKNSLR 77
Query: 73 VTGSDDMQVCVFNYNTL 89
T + ++C+ N T+
Sbjct: 78 QTYNSCARLCI-NQETV 93
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 191 (72.3 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 52/206 (25%), Positives = 91/206 (44%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L S V P ++L+S +G V +W+ +T + ++ + PV +F P
Sbjct: 299 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 358
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+ V+G D ++ + + F H V C HP ++ T S D ++LW+
Sbjct: 359 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 418
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTF-ASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
C ++F GH + + +P N F A+ + D V +W +G L+GH V
Sbjct: 419 G-NCVRIFTGHKGPIHSLTFSP--NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVC 475
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWD 215
+ + G+ L SG+ D V++WD
Sbjct: 476 SLRFSRDGE--ILASGSMDNTVRLWD 499
Score = 184 (69.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 46/177 (25%), Positives = 80/177 (45%)
Query: 47 NQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVA 106
+ V+ + V +R+ K + I SDD+ + + T HS V +
Sbjct: 251 DSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGAS 310
Query: 107 VHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRT 166
P + +LL+SS+D ++LW+ + + C ++GH + V +P F S DR
Sbjct: 311 FSPDRNYLLSSSEDGTVRLWSLQ-TFTCLVGYKGHNYPVWDTQFSPY-GYYFVSGGHDRV 368
Query: 167 VKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
++W P GH VNC ++ + Y+ +G+ DR V++WD N CV+
Sbjct: 369 ARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNCVR 423
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 185 (70.2 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 50/221 (22%), Positives = 101/221 (45%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
K+ LT S + + + L+ ++ V +W+ + ++SF V + F P
Sbjct: 65 KKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSP 124
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFH-SFEAHSDYVRCVAVHPT--QPFLLTSSDDMLIK 124
IV+ S D + ++N ++ + + H+D++ CV P+ Q +++ D L+K
Sbjct: 125 DNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVK 184
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+WN + + EGHT + + I+P D + AS D K+W + ++LE
Sbjct: 185 VWNLKNC-DLNKNLEGHTGVLNTVTISP-DGSLCASGGKDGVAKLWDVKEGKHLYSLETG 242
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
+N + + Y + A DR ++IW+ ++K + +
Sbjct: 243 ST-INSLCF---SPCDYWLCAATDRFIRIWNLESKLIISEI 279
Score = 175 (66.7 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 48/168 (28%), Positives = 79/168 (47%)
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERF-------HSFEAHSDYVRCVAVHPTQPFLLTSSD 119
P+ IV+ S D ++ V+N NT + S HS + V++ F L+ S
Sbjct: 33 PKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSW 92
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ-LGSASPN 178
D ++LW+ + F GHT V + +P DN SAS D+T+K+W L
Sbjct: 93 DHSVRLWDLSLGETIRS-FIGHTSDVFSVSFSP-DNRQIVSASRDKTIKLWNTLAQCKYT 150
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
T + H + CV + ++ ++S D+LVK+W+ +N + LE
Sbjct: 151 ITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLE 198
Score = 168 (64.2 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 46/157 (29%), Positives = 72/157 (45%)
Query: 73 VTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAW 132
++GS D V +++ + E SF H+ V V+ P ++++S D IKLWN
Sbjct: 88 LSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQC 147
Query: 133 ACQQVFEGHTHYVMQIVINPKDNNTF-ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+ HT ++ + +P N S D+ VKVW L + N LEGH +N V
Sbjct: 148 KYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTV 207
Query: 192 DYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
G SG D + K+WD + + +LE+G
Sbjct: 208 TISPDGS--LCASGGKDGVAKLWDVKEGKHLYSLETG 242
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 185 (70.2 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 50/221 (22%), Positives = 101/221 (45%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
K+ LT S + + + L+ ++ V +W+ + ++SF V + F P
Sbjct: 65 KKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSP 124
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFH-SFEAHSDYVRCVAVHPT--QPFLLTSSDDMLIK 124
IV+ S D + ++N ++ + + H+D++ CV P+ Q +++ D L+K
Sbjct: 125 DNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVK 184
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+WN + + EGHT + + I+P D + AS D K+W + ++LE
Sbjct: 185 VWNLKNC-DLNKNLEGHTGVLNTVTISP-DGSLCASGGKDGVAKLWDVKEGKHLYSLETG 242
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
+N + + Y + A DR ++IW+ ++K + +
Sbjct: 243 ST-INSLCF---SPCDYWLCAATDRFIRIWNLESKLIISEI 279
Score = 175 (66.7 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 48/168 (28%), Positives = 79/168 (47%)
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERF-------HSFEAHSDYVRCVAVHPTQPFLLTSSD 119
P+ IV+ S D ++ V+N NT + S HS + V++ F L+ S
Sbjct: 33 PKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSW 92
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ-LGSASPN 178
D ++LW+ + F GHT V + +P DN SAS D+T+K+W L
Sbjct: 93 DHSVRLWDLSLGETIRS-FIGHTSDVFSVSFSP-DNRQIVSASRDKTIKLWNTLAQCKYT 150
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
T + H + CV + ++ ++S D+LVK+W+ +N + LE
Sbjct: 151 ITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLE 198
Score = 168 (64.2 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 46/157 (29%), Positives = 72/157 (45%)
Query: 73 VTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAW 132
++GS D V +++ + E SF H+ V V+ P ++++S D IKLWN
Sbjct: 88 LSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQC 147
Query: 133 ACQQVFEGHTHYVMQIVINPKDNNTF-ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+ HT ++ + +P N S D+ VKVW L + N LEGH +N V
Sbjct: 148 KYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTV 207
Query: 192 DYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
G SG D + K+WD + + +LE+G
Sbjct: 208 TISPDGS--LCASGGKDGVAKLWDVKEGKHLYSLETG 242
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 190 (71.9 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 58/222 (26%), Positives = 109/222 (49%)
Query: 9 RKLTARSDRVK--CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+++ RS+ K C + E +++ L + + +W+ +T + +K V ++
Sbjct: 216 QRIQCRSENSKGVYCLQYDDEK-IISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYD 274
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
R IVTGS D V V++ N+ E ++ H++ V + + ++T S D I +W
Sbjct: 275 ERV--IVTGSSDSTVRVWDVNSGEVLNTLIHHNEAV--LHLRFCNGLMVTCSKDRSIAVW 330
Query: 127 NWEKAW--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+ + ++V GH V + D+ SAS DRT+KVW + TL GH
Sbjct: 331 DMASPTDISLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH 387
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++G+ C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 388 KRGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 425
Score = 134 (52.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V++ +T E + H + C+ +++ S D I+LW+ E
Sbjct: 360 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 416
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 417 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 473
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
H V + + D+ +IS + D + IWD+ N
Sbjct: 474 VEHSGRVFRLQF----DEFQIISSSHDDTILIWDFLN 506
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 51/218 (23%), Positives = 93/218 (42%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAK 64
L+ + LT + V C L E ++ + V VW+ + + + + + V +
Sbjct: 255 LECLKILTGHTGSVLC--LQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLR 312
Query: 65 FVPRKNWIVTGSDDMQVCVFNYNT---LERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
F +VT S D + V++ + + H V V +++++S D
Sbjct: 313 FC--NGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFD--DKYIVSASGDR 368
Query: 122 LIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
IK+W+ C+ V GH + + +D S S D T+++W + +
Sbjct: 369 TIKVWSTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGACLR 422
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
LEGHE+ V C+ + D ++SGA D +K+WD Q
Sbjct: 423 VLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQ 456
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 191 (72.3 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 57/205 (27%), Positives = 96/205 (46%)
Query: 23 LHPTEPWMLASLYNGHVHVWNHETN-QNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQV 81
LH T +++ASL N +HV+ +TN +N K+ E + V A VP N +V+G D +V
Sbjct: 259 LHLTPKYIVASLDNAKIHVY--DTNGENQKTLEGHVMGVWA--MVPWDNILVSGGCDREV 314
Query: 82 CVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGH 141
V+N T E + H+ VRC+ + ++ S D +++W+ + C+ V GH
Sbjct: 315 RVWNMATGESIYLLRGHTSTVRCLKMSDKNT-AISGSRDTTLRIWDL-RTGTCRSVLVGH 372
Query: 142 THYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPY 201
V + ++ + S S D T +VW + L GH + + + D
Sbjct: 373 QASVRCLAVH---GDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAF----DGRR 425
Query: 202 LISGADDRLVKIWDYQNKTCVQTLE 226
+ +G+ D V+IWD C L+
Sbjct: 426 IATGSLDTSVRIWDPNTGQCHAILQ 450
Score = 150 (57.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 47/190 (24%), Positives = 83/190 (43%)
Query: 28 PW---MLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVF 84
PW +++ + V VWN T +++ VR K + KN ++GS D + ++
Sbjct: 300 PWDNILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLK-MSDKNTAISGSRDTTLRIW 358
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
+ T H VRC+AVH +++ S D ++W+ + + GH
Sbjct: 359 DLRTGTCRSVLVGHQASVRCLAVHGD--IVVSGSYDTTARVWSISEG-RFLRALSGHFSQ 415
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLIS 204
+ I D A+ SLD +V++W + + L+GH V + GD L++
Sbjct: 416 IYAIAF---DGRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQM--SGDT--LVT 468
Query: 205 GADDRLVKIW 214
G D V++W
Sbjct: 469 GGSDGSVRVW 478
Score = 137 (53.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 41/158 (25%), Positives = 75/158 (47%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV D+ ++ V++ N E + E H + A+ P L++ D +++WN
Sbjct: 265 YIVASLDNAKIHVYDTNG-ENQKTLEGH--VMGVWAMVPWDNILVSGGCDREVRVWNMAT 321
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
+ + GHT V + ++ D NT S S D T+++W L + + L GH+ V C
Sbjct: 322 GESIY-LLRGHTSTVRCLKMS--DKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQASVRC 378
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
+ + GD ++SG+ D ++W ++ L SG
Sbjct: 379 LAVH--GD--IVVSGSYDTTARVWSISEGRFLRAL-SG 411
Score = 134 (52.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 34/143 (23%), Positives = 64/143 (44%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+GS D V++ + + H + +A + + T S D +++W+
Sbjct: 386 VVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFDGRR--IATGSLDTSVRIWD-PNT 442
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
C + +GHT V Q+ ++ +T + D +V+VW L +P L H+ V +
Sbjct: 443 GQCHAILQGHTSLVGQLQMS---GDTLVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSL 499
Query: 192 DYYHGGDKPYLISGADDRLVKIW 214
+ D ++SG D VK+W
Sbjct: 500 QF----DNNRIVSGGSDGRVKVW 518
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 185 (70.2 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 68/222 (30%), Positives = 103/222 (46%)
Query: 5 LDIKRKLTARSDRVKCCDL--HPTEPWMLASLYNGH-VHVWNHETNQNV-KSF--EVCDL 58
L ++ ++ A D +C L +PT +LAS + +W E + + KS E
Sbjct: 5 LVLQSRVPAHPDS-RCWFLAWNPTGT-LLASCGGDRKIRIWGTEGDSWICKSVLSEGHQR 62
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVF--NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLT 116
VR + P N++ + S D C++ N + E + E H + V+ VA P+ L T
Sbjct: 63 TVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLAT 122
Query: 117 SSDDMLIKLW--NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
S D + +W + E + C V HT V +V +P ASAS D TVK++Q
Sbjct: 123 CSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYQEEG 181
Query: 175 AS--PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
TLEGHE V + + G + L S +DDR V+IW
Sbjct: 182 DDWVCCATLEGHESTVWSIAFDPSGQR--LASCSDDRTVRIW 221
Score = 163 (62.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 47/172 (27%), Positives = 80/172 (46%)
Query: 25 PTEPWMLASLYNGHVHVW--NHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVC 82
P ++ ++ ++ +W N + + V + E + V++ + P N + T S D V
Sbjct: 71 PCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVW 130
Query: 83 VFNYNTLERFHS---FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE-KAWACQQVF 138
V+ + + + +H+ V+ V HP+Q L ++S D +KL+ E W C
Sbjct: 131 VWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATL 190
Query: 139 EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
EGH V I +P AS S DRTV++W+ L G+E+GV C
Sbjct: 191 EGHESTVWSIAFDPSGQR-LASCSDDRTVRIWRQ-------YLPGNEQGVAC 234
Score = 150 (57.9 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 46/140 (32%), Positives = 66/140 (47%)
Query: 97 AHSDYVRC--VAVHPTQPFLLTSSDDMLIKLWNWE-KAWACQQVF-EGHTHYVMQIVINP 152
AH D RC +A +PT L + D I++W E +W C+ V EGH V ++ +P
Sbjct: 13 AHPDS-RCWFLAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP 71
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNF--TLEGHEKGVNCVDYYHGGDKPYLISGADDRL 210
N ASAS D T +W+ TLEGHE V V + G+ L + + D+
Sbjct: 72 C-GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN--LLATCSRDKS 128
Query: 211 VKIWDYQNKT---CVQTLES 227
V +W+ + CV L S
Sbjct: 129 VWVWEVDEEDEYECVSVLNS 148
>UNIPROTKB|C9JXA5 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 HOGENOM:HOG000176356 HGNC:HGNC:4398
IPI:IPI00790302 ProteinModelPortal:C9JXA5 SMR:C9JXA5 STRING:C9JXA5
PRIDE:C9JXA5 Ensembl:ENST00000451587 ArrayExpress:C9JXA5
Bgee:C9JXA5 Uniprot:C9JXA5
Length = 251
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 56/213 (26%), Positives = 95/213 (44%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H T+ +L S +G + +W+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLT 116
+ P N++ G D +C +++ T E R H+ Y+ C ++T
Sbjct: 102 TCAYAPSGNFVACGGLD-NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IIT 159
Query: 117 SSDDMLIKLWNWEKAWACQQV-FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA 175
SS D LW+ E Q V F GH+ VM + + P D TF S + D ++K+W + +
Sbjct: 160 SSGDTTCALWDIETGQ--QTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVRDS 216
Query: 176 SPNFTLEGHEKGVNCVDYYHGGDKPYLISGADD 208
T GHE +N V ++ G +G+DD
Sbjct: 217 MCRQTFIGHESDINAVAFFPNGYA--FTTGSDD 247
Score = 124 (48.7 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 36/156 (23%), Positives = 67/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ +++ T + H+ S +V A P+ F+ D + +++ +
Sbjct: 70 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTR 129
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + GH V
Sbjct: 130 EGNVRVSRELPGHTGYLS--CCRFLDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDV 187
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ G +SGA D +K+WD ++ C QT
Sbjct: 188 MSLSLAPDGRT--FVSGACDASIKLWDVRDSMCRQT 221
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 187 (70.9 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 53/206 (25%), Positives = 88/206 (42%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
HP +LA + + +WN + + F +L V F P I TGSDD + V
Sbjct: 164 HPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIV 223
Query: 84 FNYNTLERFHSFEAH---SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEG 140
+N T E H + H ++ + C+ ++ ++ S D + + N +
Sbjct: 224 WNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSL-NS 282
Query: 141 HTHYVMQIVINPKDNNT--FASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGD 198
HT V + +P A+ +D+ + +W L ++P F E HE+GV + + G
Sbjct: 283 HTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICE-HEEGVTSLTWI--GT 339
Query: 199 KPYLISGADDRLVKIWDYQNKTCVQT 224
YL +G + V IWD CV T
Sbjct: 340 SKYLATGCANGTVSIWDSLLGNCVHT 365
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 190 (71.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 52/186 (27%), Positives = 89/186 (47%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
VWN ET + + + VR ++ +V+GS D + V++ T + H H
Sbjct: 325 VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 382
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
VRCV + +++ + D ++K+W+ E C +GHT+ V + D S
Sbjct: 383 AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 436
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 220
SLD +++VW + + + TL GH+ + ++ L+SG D VKIWD +
Sbjct: 437 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 492
Query: 221 CVQTLE 226
C+QTL+
Sbjct: 493 CLQTLQ 498
Score = 186 (70.5 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 46/158 (29%), Positives = 78/158 (49%)
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
R N I++GS D + V+N T E H+ H+ VRC+ +H + +++ S D +++W+
Sbjct: 310 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 367
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
E C V GH V + D S + D VKVW + + TL+GH
Sbjct: 368 IETG-QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 423
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
V + + D +++SG+ D +++WD + C+ TL
Sbjct: 424 VYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTL 457
Score = 185 (70.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 59/224 (26%), Positives = 106/224 (47%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L + V+C LH E +++ + + VW+ ET Q + VR ++ R+
Sbjct: 337 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 393
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+V+G+ D V V++ T H+ + H++ V + +++ S D I++W+ E
Sbjct: 394 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 450
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG---HEKG 187
C GH + + KDN S + D TVK+W + + TL+G H+
Sbjct: 451 G-NCIHTLTGHQSLTSGMEL--KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 506
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ---TLESG 228
V C+ + +K ++I+ +DD VK+WD + ++ TLESG
Sbjct: 507 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 546
Score = 182 (69.1 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 49/157 (31%), Positives = 77/157 (49%)
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
N IV+GSDD + V++ T + + H+ V + +++ S D +K+WN E
Sbjct: 272 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 329
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
C GHT V + ++ K S S D T++VW + + L GH V
Sbjct: 330 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 385
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
CV Y D ++SGA D +VK+WD + +TC+ TL+
Sbjct: 386 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQ 418
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 190 (71.9 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 52/186 (27%), Positives = 89/186 (47%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
VWN ET + + + VR ++ +V+GS D + V++ T + H H
Sbjct: 367 VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 424
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
VRCV + +++ + D ++K+W+ E C +GHT+ V + D S
Sbjct: 425 AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 478
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 220
SLD +++VW + + + TL GH+ + ++ L+SG D VKIWD +
Sbjct: 479 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 534
Query: 221 CVQTLE 226
C+QTL+
Sbjct: 535 CLQTLQ 540
Score = 186 (70.5 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 46/158 (29%), Positives = 78/158 (49%)
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
R N I++GS D + V+N T E H+ H+ VRC+ +H + +++ S D +++W+
Sbjct: 352 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 409
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
E C V GH V + D S + D VKVW + + TL+GH
Sbjct: 410 IETG-QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 465
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
V + + D +++SG+ D +++WD + C+ TL
Sbjct: 466 VYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTL 499
Score = 185 (70.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 59/224 (26%), Positives = 106/224 (47%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L + V+C LH E +++ + + VW+ ET Q + VR ++ R+
Sbjct: 379 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 435
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+V+G+ D V V++ T H+ + H++ V + +++ S D I++W+ E
Sbjct: 436 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 492
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG---HEKG 187
C GH + + KDN S + D TVK+W + + TL+G H+
Sbjct: 493 G-NCIHTLTGHQSLTSGMEL--KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSA 548
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ---TLESG 228
V C+ + +K ++I+ +DD VK+WD + ++ TLESG
Sbjct: 549 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 588
Score = 182 (69.1 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 49/157 (31%), Positives = 77/157 (49%)
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
N IV+GSDD + V++ T + + H+ V + +++ S D +K+WN E
Sbjct: 314 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 371
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
C GHT V + ++ K S S D T++VW + + L GH V
Sbjct: 372 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 427
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
CV Y D ++SGA D +VK+WD + +TC+ TL+
Sbjct: 428 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQ 460
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 182 (69.1 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 56/217 (25%), Positives = 97/217 (44%)
Query: 7 IKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVRAAK 64
++ + T R K +H T+ +L S +G + +W+ T V + + V
Sbjct: 1 MRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCA 60
Query: 65 FVPRKNWIVTGSDDMQVC-VFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLTSSD 119
+ P N++ G D +C +++ T E R H+ Y+ C ++TSS
Sbjct: 61 YAPSGNFVACGGLD-NICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IITSSG 118
Query: 120 DMLIKLWNWEKAWACQQV-FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
D LW+ E Q V F GH+ VM + + P D TF S + D ++K+W + +
Sbjct: 119 DTTCALWDIETGQ--QTVGFAGHSGDVMSLSLAP-DGRTFVSGACDASIKLWDVRDSMCR 175
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N V ++ G +G+DD +++D
Sbjct: 176 QTFIGHESDINAVAFFPNGYA--FTTGSDDATCRLFD 210
Score = 132 (51.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/211 (23%), Positives = 92/211 (43%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQ-NVKSFEVCDLP-----VRAAKFVP 67
RS V C P+ ++ + +++ +T + NV+ +LP + +F+
Sbjct: 52 RSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLD 109
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
N I+T S D +++ T ++ F HS V +++ P ++ + D IKLW+
Sbjct: 110 -DNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 168
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK- 186
+ C+Q F GH + + P + F + S D T +++ L A + H+
Sbjct: 169 VRDSM-CRQTFIGHESDINAVAFFP-NGYAFTTGSDDATCRLFDL-RADQELLMYSHDNI 225
Query: 187 --GVNCVDYYHGGDKPYLISGADDRLVKIWD 215
G+ V + G L++G DD IWD
Sbjct: 226 ICGITSVAFSRSGR--LLLAGYDDFNCNIWD 254
Score = 124 (48.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/156 (23%), Positives = 67/156 (42%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+ S D ++ +++ T + H+ S +V A P+ F+ D + +++ +
Sbjct: 26 LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTR 85
Query: 132 WACQQV---FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGV 188
+V GHT Y+ D+N ++S D T +W + + GH V
Sbjct: 86 EGNVRVSRELPGHTGYLS--CCRFLDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDV 143
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ G +SGA D +K+WD ++ C QT
Sbjct: 144 MSLSLAPDGRT--FVSGACDASIKLWDVRDSMCRQT 177
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 190 (71.9 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 49/192 (25%), Positives = 88/192 (45%)
Query: 25 PTEP-WMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
PT W+L+S + + +W+ + Q + ++ D PV ++ P ++ V+G D +
Sbjct: 328 PTNARWLLSSSADRTIRLWSLDLWQCMVVYKGHDQPVWDLQWGPFGHYFVSGGHDKTARL 387
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
+ + + + F H V CV HP ++ T S D +++W A + +F GHT
Sbjct: 388 WVTDHIRQQRIFVGHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTGNAVR-MFTGHTG 446
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
+ + + +D T ASA ++ +W LG + GH KG + L+
Sbjct: 447 NITALACS-RDGKTLASADDHGSILLWDLGPGRLLKRMRGHGKG-GIWSLSWSVESNVLV 504
Query: 204 SGADDRLVKIWD 215
SG D V++WD
Sbjct: 505 SGGADGTVRVWD 516
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 176 (67.0 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 46/157 (29%), Positives = 78/157 (49%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
I+TGS D V V++ N E ++ H + V + + ++T S D I +W+
Sbjct: 356 IITGSSDSTVRVWDVNAGEMLNTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASP 413
Query: 132 W--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
++V GH V + D+ SAS DRT+KVW + TL GH++G+
Sbjct: 414 TDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 470
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 471 CLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 503
Score = 159 (61.0 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 43/158 (27%), Positives = 74/158 (46%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
IV+G D + +++ NTLE H+ V C+ + ++T S D +++W+
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNAG 373
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE----GHEKG 187
+ H V+ + N N + S DR++ VW + S + + TL GH
Sbjct: 374 EMLNTLIH-HCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPT-DITLRRVLVGHRAA 428
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
VN VD+ D Y++S + DR +K+W+ V+TL
Sbjct: 429 VNVVDF----DDKYIVSASGDRTIKVWNTSTCEFVRTL 462
Score = 144 (55.7 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 57/219 (26%), Positives = 94/219 (42%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSF-EVCDLPVRAA 63
L+ KR LT + V C L E ++ + V VW+ + + + C+ V
Sbjct: 333 LECKRILTGHTGSVLC--LQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEA-VLHL 389
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYN-----TLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
+F +VT S D + V++ TL R H V V +++++S
Sbjct: 390 RF--NNGMMVTCSKDRSIAVWDMASPTDITLRRV--LVGHRAAVNVVDFD--DKYIVSAS 443
Query: 119 DDMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
D IK+WN C+ V GH + + +D S S D T+++W + +
Sbjct: 444 GDRTIKVWNTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGA 497
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
LEGHE+ V C+ + D ++SGA D +K+WD
Sbjct: 498 CLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWD 532
Score = 140 (54.3 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 46/162 (28%), Positives = 71/162 (43%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V+N +T E + H + C+ +++ S D I+LW+ E
Sbjct: 438 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 494
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 495 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL 551
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
H V + + D+ ++S + D + IWD+ N Q
Sbjct: 552 VEHSGRVFRLQF----DEFQIVSSSHDDTILIWDFLNDPAAQ 589
Score = 37 (18.1 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 21/77 (27%), Positives = 31/77 (40%)
Query: 14 RSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI- 72
RS + C L + P L LYN QN E C+ K +P KN +
Sbjct: 21 RSLWLGCSSLADSMP-SLRCLYNPGTGAL--PAFQNSSEREDCNNDEPPRKIIPEKNSLR 77
Query: 73 VTGSDDMQVCVFNYNTL 89
T + ++C+ N T+
Sbjct: 78 QTYNSCARLCL-NQETV 93
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 190 (71.9 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 52/186 (27%), Positives = 89/186 (47%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
VWN ET + + + VR ++ +V+GS D + V++ T + H H
Sbjct: 365 VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 422
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
VRCV + +++ + D ++K+W+ E C +GHT+ V + D S
Sbjct: 423 AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 476
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 220
SLD +++VW + + + TL GH+ + ++ L+SG D VKIWD +
Sbjct: 477 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 532
Query: 221 CVQTLE 226
C+QTL+
Sbjct: 533 CLQTLQ 538
Score = 186 (70.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 46/158 (29%), Positives = 78/158 (49%)
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
R N I++GS D + V+N T E H+ H+ VRC+ +H + +++ S D +++W+
Sbjct: 350 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 407
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
E C V GH V + D S + D VKVW + + TL+GH
Sbjct: 408 IETG-QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 463
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
V + + D +++SG+ D +++WD + C+ TL
Sbjct: 464 VYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTL 497
Score = 185 (70.2 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 59/224 (26%), Positives = 106/224 (47%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L + V+C LH E +++ + + VW+ ET Q + VR ++ R+
Sbjct: 377 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 433
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+V+G+ D V V++ T H+ + H++ V + +++ S D I++W+ E
Sbjct: 434 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 490
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG---HEKG 187
C GH + + KDN S + D TVK+W + + TL+G H+
Sbjct: 491 G-NCIHTLTGHQSLTSGMEL--KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 546
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ---TLESG 228
V C+ + +K ++I+ +DD VK+WD + ++ TLESG
Sbjct: 547 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 586
Score = 182 (69.1 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 49/157 (31%), Positives = 77/157 (49%)
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
N IV+GSDD + V++ T + + H+ V + +++ S D +K+WN E
Sbjct: 312 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 369
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
C GHT V + ++ K S S D T++VW + + L GH V
Sbjct: 370 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 425
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
CV Y D ++SGA D +VK+WD + +TC+ TL+
Sbjct: 426 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQ 458
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 190 (71.9 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 52/186 (27%), Positives = 89/186 (47%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
VWN ET + + + VR ++ +V+GS D + V++ T + H H
Sbjct: 367 VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 424
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
VRCV + +++ + D ++K+W+ E C +GHT+ V + D S
Sbjct: 425 AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 478
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 220
SLD +++VW + + + TL GH+ + ++ L+SG D VKIWD +
Sbjct: 479 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 534
Query: 221 CVQTLE 226
C+QTL+
Sbjct: 535 CLQTLQ 540
Score = 186 (70.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 46/158 (29%), Positives = 78/158 (49%)
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
R N I++GS D + V+N T E H+ H+ VRC+ +H + +++ S D +++W+
Sbjct: 352 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 409
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
E C V GH V + D S + D VKVW + + TL+GH
Sbjct: 410 IETG-QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 465
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
V + + D +++SG+ D +++WD + C+ TL
Sbjct: 466 VYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTL 499
Score = 185 (70.2 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 59/224 (26%), Positives = 106/224 (47%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L + V+C LH E +++ + + VW+ ET Q + VR ++ R+
Sbjct: 379 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 435
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+V+G+ D V V++ T H+ + H++ V + +++ S D I++W+ E
Sbjct: 436 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 492
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG---HEKG 187
C GH + + KDN S + D TVK+W + + TL+G H+
Sbjct: 493 G-NCIHTLTGHQSLTSGMEL--KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSA 548
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ---TLESG 228
V C+ + +K ++I+ +DD VK+WD + ++ TLESG
Sbjct: 549 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 588
Score = 182 (69.1 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 49/157 (31%), Positives = 77/157 (49%)
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
N IV+GSDD + V++ T + + H+ V + +++ S D +K+WN E
Sbjct: 314 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 371
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
C GHT V + ++ K S S D T++VW + + L GH V
Sbjct: 372 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 427
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
CV Y D ++SGA D +VK+WD + +TC+ TL+
Sbjct: 428 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQ 460
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 194 (73.4 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 56/215 (26%), Positives = 90/215 (41%)
Query: 3 LRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRA 62
L + + L A V+ + WML + + G+V W N NVK F+ +R
Sbjct: 149 LTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMN-NVKMFQAHKEAIRE 207
Query: 63 AKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDML 122
A F P N T SDD V ++++ H V+CV HPT+ +++ S D
Sbjct: 208 ASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQ 267
Query: 123 --IKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
IK W+ K H + VM++ +N + N +AS D K++ + +
Sbjct: 268 QPIKFWD-PKTGQSLATLHAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQ 325
Query: 181 L-EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
+ GH+K V + H + SG D + W
Sbjct: 326 VFRGHKKEATAVAW-HPVHEGLFASGGSDGSLLFW 359
Score = 164 (62.8 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 44/171 (25%), Positives = 77/171 (45%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV ++ P +VTG+ + ++N T +AH VR + ++LT+
Sbjct: 121 PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD 180
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
+K W + ++F+ H + + +P DN FA+ S D TV++W
Sbjct: 181 HGGYVKYW--QSNMNNVKMFQAHKEAIREASFSPTDNK-FATCSDDGTVRIWDFLRCHEE 237
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADD--RLVKIWDYQNKTCVQTLES 227
L GH V CVD++ K ++SG+ D + +K WD + + TL +
Sbjct: 238 RILRGHGADVKCVDWHP--TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHA 286
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 45/185 (24%), Positives = 80/185 (43%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G +WN T + D PVRA + W++T V + N + F
Sbjct: 140 SGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMF 198
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN 155
+AH + +R + PT T SDD +++W++ + +++ GH V + +P
Sbjct: 199 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWHPT-K 256
Query: 156 NTFASASLD--RTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
S S D + +K W + TL H+ V V G+ +L++ + D L K+
Sbjct: 257 GLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCKL 314
Query: 214 WDYQN 218
+D +N
Sbjct: 315 FDIRN 319
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 49/205 (23%), Positives = 85/205 (41%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI 72
A + ++ PT+ +G V +W+ + V+ + P K +
Sbjct: 200 AHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLV 259
Query: 73 VTGSDDMQ--VCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
V+GS D Q + ++ T + + AH + V V ++ +LLT+S D L KL++
Sbjct: 260 VSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRN 319
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKGVN 189
QVF GH + +P FAS D ++ W +G +E HE +
Sbjct: 320 LKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIW 379
Query: 190 CVDYYHGGDKPYLISGADDRLVKIW 214
+ ++ G L SG++D K W
Sbjct: 380 SLAWHPLGH--ILCSGSNDHTSKFW 402
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 194 (73.4 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 56/215 (26%), Positives = 90/215 (41%)
Query: 3 LRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRA 62
L + + L A V+ + WML + + G+V W N NVK F+ +R
Sbjct: 145 LTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMN-NVKMFQAHKEAIRE 203
Query: 63 AKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDML 122
A F P N T SDD V ++++ H V+CV HPT+ +++ S D
Sbjct: 204 ASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQ 263
Query: 123 --IKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
IK W+ K H + VM++ +N + N +AS D K++ + +
Sbjct: 264 QPIKFWD-PKTGQSLATLHAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQ 321
Query: 181 L-EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
+ GH+K V + H + SG D + W
Sbjct: 322 VFRGHKKEATAVAW-HPVHEGLFASGGSDGSLLFW 355
Score = 164 (62.8 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 44/171 (25%), Positives = 77/171 (45%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV ++ P +VTG+ + ++N T +AH VR + ++LT+
Sbjct: 117 PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD 176
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
+K W + ++F+ H + + +P DN FA+ S D TV++W
Sbjct: 177 HGGYVKYW--QSNMNNVKMFQAHKEAIREASFSPTDNK-FATCSDDGTVRIWDFLRCHEE 233
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADD--RLVKIWDYQNKTCVQTLES 227
L GH V CVD++ K ++SG+ D + +K WD + + TL +
Sbjct: 234 RILRGHGADVKCVDWHP--TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHA 282
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 45/185 (24%), Positives = 80/185 (43%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G +WN T + D PVRA + W++T V + N + F
Sbjct: 136 SGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMF 194
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN 155
+AH + +R + PT T SDD +++W++ + +++ GH V + +P
Sbjct: 195 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWHPT-K 252
Query: 156 NTFASASLD--RTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
S S D + +K W + TL H+ V V G+ +L++ + D L K+
Sbjct: 253 GLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCKL 310
Query: 214 WDYQN 218
+D +N
Sbjct: 311 FDIRN 315
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 49/205 (23%), Positives = 85/205 (41%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI 72
A + ++ PT+ +G V +W+ + V+ + P K +
Sbjct: 196 AHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLV 255
Query: 73 VTGSDDMQ--VCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
V+GS D Q + ++ T + + AH + V V ++ +LLT+S D L KL++
Sbjct: 256 VSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRN 315
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKGVN 189
QVF GH + +P FAS D ++ W +G +E HE +
Sbjct: 316 LKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIW 375
Query: 190 CVDYYHGGDKPYLISGADDRLVKIW 214
+ ++ G L SG++D K W
Sbjct: 376 SLAWHPLGH--ILCSGSNDHTSKFW 398
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 194 (73.4 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 56/215 (26%), Positives = 90/215 (41%)
Query: 3 LRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRA 62
L + + L A V+ + WML + + G+V W N NVK F+ +R
Sbjct: 149 LTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMN-NVKMFQAHKEAIRE 207
Query: 63 AKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDML 122
A F P N T SDD V ++++ H V+CV HPT+ +++ S D
Sbjct: 208 ASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQ 267
Query: 123 --IKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
IK W+ K H + VM++ +N + N +AS D K++ + +
Sbjct: 268 QPIKFWD-PKTGQSLATLHAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQ 325
Query: 181 L-EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
+ GH+K V + H + SG D + W
Sbjct: 326 VFRGHKKEATAVAW-HPVHEGLFASGGSDGSLLFW 359
Score = 164 (62.8 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 44/171 (25%), Positives = 77/171 (45%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV ++ P +VTG+ + ++N T +AH VR + ++LT+
Sbjct: 121 PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD 180
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
+K W + ++F+ H + + +P DN FA+ S D TV++W
Sbjct: 181 HGGYVKYW--QSNMNNVKMFQAHKEAIREASFSPTDNK-FATCSDDGTVRIWDFLRCHEE 237
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADD--RLVKIWDYQNKTCVQTLES 227
L GH V CVD++ K ++SG+ D + +K WD + + TL +
Sbjct: 238 RILRGHGADVKCVDWHP--TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHA 286
Score = 144 (55.7 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 45/185 (24%), Positives = 80/185 (43%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G +WN T + D PVRA + W++T V + N + F
Sbjct: 140 SGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMF 198
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN 155
+AH + +R + PT T SDD +++W++ + +++ GH V + +P
Sbjct: 199 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWHPT-K 256
Query: 156 NTFASASLD--RTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
S S D + +K W + TL H+ V V G+ +L++ + D L K+
Sbjct: 257 GLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCKL 314
Query: 214 WDYQN 218
+D +N
Sbjct: 315 FDIRN 319
Score = 144 (55.7 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 49/205 (23%), Positives = 85/205 (41%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI 72
A + ++ PT+ +G V +W+ + V+ + P K +
Sbjct: 200 AHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLV 259
Query: 73 VTGSDDMQ--VCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
V+GS D Q + ++ T + + AH + V V ++ +LLT+S D L KL++
Sbjct: 260 VSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRN 319
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKGVN 189
QVF GH + +P FAS D ++ W +G +E HE +
Sbjct: 320 LKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIW 379
Query: 190 CVDYYHGGDKPYLISGADDRLVKIW 214
+ ++ G L SG++D K W
Sbjct: 380 SLAWHPLGH--ILCSGSNDHTSKFW 402
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 194 (73.4 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 56/215 (26%), Positives = 90/215 (41%)
Query: 3 LRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRA 62
L + + L A V+ + WML + + G+V W N NVK F+ +R
Sbjct: 149 LTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMN-NVKMFQAHKEAIRE 207
Query: 63 AKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDML 122
A F P N T SDD V ++++ H V+CV HPT+ +++ S D
Sbjct: 208 ASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQ 267
Query: 123 --IKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
IK W+ K H + VM++ +N + N +AS D K++ + +
Sbjct: 268 QPIKFWD-PKTGQSLATLHAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQ 325
Query: 181 L-EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
+ GH+K V + H + SG D + W
Sbjct: 326 VFRGHKKEATAVAW-HPVHEGLFASGGSDGSLLFW 359
Score = 164 (62.8 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 44/171 (25%), Positives = 77/171 (45%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV ++ P +VTG+ + ++N T +AH VR + ++LT+
Sbjct: 121 PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD 180
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
+K W + ++F+ H + + +P DN FA+ S D TV++W
Sbjct: 181 HGGYVKYW--QSNMNNVKMFQAHKEAIREASFSPTDNK-FATCSDDGTVRIWDFLRCHEE 237
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADD--RLVKIWDYQNKTCVQTLES 227
L GH V CVD++ K ++SG+ D + +K WD + + TL +
Sbjct: 238 RILRGHGADVKCVDWHP--TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHA 286
Score = 144 (55.7 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 45/185 (24%), Positives = 80/185 (43%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G +WN T + D PVRA + W++T V + N + F
Sbjct: 140 SGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMF 198
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN 155
+AH + +R + PT T SDD +++W++ + +++ GH V + +P
Sbjct: 199 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWHPT-K 256
Query: 156 NTFASASLD--RTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
S S D + +K W + TL H+ V V G+ +L++ + D L K+
Sbjct: 257 GLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCKL 314
Query: 214 WDYQN 218
+D +N
Sbjct: 315 FDIRN 319
Score = 144 (55.7 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 49/205 (23%), Positives = 85/205 (41%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI 72
A + ++ PT+ +G V +W+ + V+ + P K +
Sbjct: 200 AHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLV 259
Query: 73 VTGSDDMQ--VCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
V+GS D Q + ++ T + + AH + V V ++ +LLT+S D L KL++
Sbjct: 260 VSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRN 319
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKGVN 189
QVF GH + +P FAS D ++ W +G +E HE +
Sbjct: 320 LKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIW 379
Query: 190 CVDYYHGGDKPYLISGADDRLVKIW 214
+ ++ G L SG++D K W
Sbjct: 380 SLAWHPLGH--ILCSGSNDHTSKFW 402
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 194 (73.4 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 56/215 (26%), Positives = 90/215 (41%)
Query: 3 LRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRA 62
L + + L A V+ + WML + + G+V W N NVK F+ +R
Sbjct: 149 LTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMN-NVKMFQAHKEAIRE 207
Query: 63 AKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDML 122
A F P N T SDD V ++++ H V+CV HPT+ +++ S D
Sbjct: 208 ASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQ 267
Query: 123 --IKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
IK W+ K H + VM++ +N + N +AS D K++ + +
Sbjct: 268 QPIKFWD-PKTGQSLATLHAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQ 325
Query: 181 L-EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
+ GH+K V + H + SG D + W
Sbjct: 326 VFRGHKKEATAVAW-HPVHEGLFASGGSDGSLLFW 359
Score = 164 (62.8 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 44/171 (25%), Positives = 77/171 (45%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV ++ P +VTG+ + ++N T +AH VR + ++LT+
Sbjct: 121 PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD 180
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
+K W + ++F+ H + + +P DN FA+ S D TV++W
Sbjct: 181 HGGYVKYW--QSNMNNVKMFQAHKEAIREASFSPTDNK-FATCSDDGTVRIWDFLRCHEE 237
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADD--RLVKIWDYQNKTCVQTLES 227
L GH V CVD++ K ++SG+ D + +K WD + + TL +
Sbjct: 238 RILRGHGADVKCVDWHP--TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHA 286
Score = 144 (55.7 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 45/185 (24%), Positives = 80/185 (43%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G +WN T + D PVRA + W++T V + N + F
Sbjct: 140 SGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMF 198
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN 155
+AH + +R + PT T SDD +++W++ + +++ GH V + +P
Sbjct: 199 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWHPT-K 256
Query: 156 NTFASASLD--RTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
S S D + +K W + TL H+ V V G+ +L++ + D L K+
Sbjct: 257 GLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCKL 314
Query: 214 WDYQN 218
+D +N
Sbjct: 315 FDIRN 319
Score = 144 (55.7 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 49/205 (23%), Positives = 85/205 (41%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI 72
A + ++ PT+ +G V +W+ + V+ + P K +
Sbjct: 200 AHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLV 259
Query: 73 VTGSDDMQ--VCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
V+GS D Q + ++ T + + AH + V V ++ +LLT+S D L KL++
Sbjct: 260 VSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRN 319
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKGVN 189
QVF GH + +P FAS D ++ W +G +E HE +
Sbjct: 320 LKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIW 379
Query: 190 CVDYYHGGDKPYLISGADDRLVKIW 214
+ ++ G L SG++D K W
Sbjct: 380 SLAWHPLGH--ILCSGSNDHTSKFW 402
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 194 (73.4 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 56/215 (26%), Positives = 90/215 (41%)
Query: 3 LRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRA 62
L + + L A V+ + WML + + G+V W N NVK F+ +R
Sbjct: 149 LTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMN-NVKMFQAHKEAIRE 207
Query: 63 AKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDML 122
A F P N T SDD V ++++ H V+CV HPT+ +++ S D
Sbjct: 208 ASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQ 267
Query: 123 --IKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
IK W+ K H + VM++ +N + N +AS D K++ + +
Sbjct: 268 QPIKFWD-PKTGQSLATLHAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQ 325
Query: 181 L-EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
+ GH+K V + H + SG D + W
Sbjct: 326 VFRGHKKEATAVAW-HPVHEGLFASGGSDGSLLFW 359
Score = 164 (62.8 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 44/171 (25%), Positives = 77/171 (45%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
PV ++ P +VTG+ + ++N T +AH VR + ++LT+
Sbjct: 121 PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD 180
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
+K W + ++F+ H + + +P DN FA+ S D TV++W
Sbjct: 181 HGGYVKYW--QSNMNNVKMFQAHKEAIREASFSPTDNK-FATCSDDGTVRIWDFLRCHEE 237
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADD--RLVKIWDYQNKTCVQTLES 227
L GH V CVD++ K ++SG+ D + +K WD + + TL +
Sbjct: 238 RILRGHGADVKCVDWHP--TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHA 286
Score = 144 (55.7 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 45/185 (24%), Positives = 80/185 (43%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G +WN T + D PVRA + W++T V + N + F
Sbjct: 140 SGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMF 198
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN 155
+AH + +R + PT T SDD +++W++ + +++ GH V + +P
Sbjct: 199 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWHPT-K 256
Query: 156 NTFASASLD--RTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
S S D + +K W + TL H+ V V G+ +L++ + D L K+
Sbjct: 257 GLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCKL 314
Query: 214 WDYQN 218
+D +N
Sbjct: 315 FDIRN 319
Score = 144 (55.7 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 49/205 (23%), Positives = 85/205 (41%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI 72
A + ++ PT+ +G V +W+ + V+ + P K +
Sbjct: 200 AHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLV 259
Query: 73 VTGSDDMQ--VCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
V+GS D Q + ++ T + + AH + V V ++ +LLT+S D L KL++
Sbjct: 260 VSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRN 319
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKGVN 189
QVF GH + +P FAS D ++ W +G +E HE +
Sbjct: 320 LKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIW 379
Query: 190 CVDYYHGGDKPYLISGADDRLVKIW 214
+ ++ G L SG++D K W
Sbjct: 380 SLAWHPLGH--ILCSGSNDHTSKFW 402
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 189 (71.6 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 51/189 (26%), Positives = 85/189 (44%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
V++W+ + S PV + + + IV GS + V++ + + H
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
+ + HP F+ + S D IKLW+ + C + GH+ V + +P D
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRK-GCVFRYRGHSQAVRCLRFSP-DGKWL 162
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI-SGADDRLVKIWDYQ 217
ASA+ D TVK+W L + GH VN V++ H + YL+ SG+ DR ++ WD +
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF-HPNE--YLLASGSSDRTIRFWDLE 219
Query: 218 NKTCVQTLE 226
V +E
Sbjct: 220 KFQVVSCIE 228
Score = 171 (65.3 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 46/177 (25%), Positives = 81/177 (45%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V+ L+ E ++A +G + VW+ E + +++ + + F P
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
++ +GS D + +++ + HS VRC+ P +L +++DD +KLW+
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT- 177
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
A F GHT V + +P + AS S DRT++ W L +EG E G
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEG-EPG 232
Score = 162 (62.1 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 39/144 (27%), Positives = 66/144 (45%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+ TG DD +V +++ N S H+ V V ++ + ++ S I++W+ E A
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+ + GH + + +P AS S D +K+W + F GH + V C+
Sbjct: 96 KILRTLM-GHKANICSLDFHPY-GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 153
Query: 192 DYYHGGDKPYLISGADDRLVKIWD 215
+ D +L S ADD VK+WD
Sbjct: 154 RF--SPDGKWLASAADDHTVKLWD 175
Score = 127 (49.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 51/227 (22%), Positives = 90/227 (39%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
I R L + D HP ++ + + ++ +W+ V + VR +F
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P W+ + +DD V +++ + F H+ V V HP + L + S D I+ W
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Query: 127 NWEK--AWACQQVFEGHTHYVMQIVIN----PK----DNNTFASASLDRTVKVWQ-LGSA 175
+ EK +C + G Y V+ PK S S R+ ++ L +A
Sbjct: 217 DLEKFQVVSCIEGEPGPVRYAGSWVVGLSPPPKVVGCRYGAGVSRSHHRSCSLFPGLPTA 276
Query: 176 SPNFTLEG-HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
P+F H + V + D L SG D L +++ ++ + C
Sbjct: 277 FPDFLRPTPHSRLPRSVLF--NPDGCCLYSGCQDSL-RVYGWEPERC 320
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 176 (67.0 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 45/159 (28%), Positives = 78/159 (49%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+ TGS D + +++ T + HSD V+ + + L+T S D I++WN+
Sbjct: 315 LFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDDRK--LITGSLDKTIRVWNYITG 372
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
C + GH+ V+ + K S S D+TVKVW + S + +TL GH + VNCV
Sbjct: 373 -ECISTYRGHSDSVLSVDSYQK---VIVSGSADKTVKVWHVESRTC-YTLRGHTEWVNCV 427
Query: 192 DYYHGGDKPY-LISGADDRLVKIWDYQNKTCVQTLESGI 229
+ K + S +DD +++WD + +C++ +
Sbjct: 428 KLH---PKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHV 463
Score = 162 (62.1 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 58/225 (25%), Positives = 103/225 (45%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPR 68
R+L+ SD VK L+ + ++ + + VWN+ T + + ++ V + +
Sbjct: 336 RRLSGHSDGVKT--LYFDDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSYQK 393
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW 128
IV+GS D V V++ + ++ H+++V CV +HP + SDD I++W+
Sbjct: 394 V--IVSGSADKTVKVWHVES-RTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDI 450
Query: 129 EKAWACQQVFEGHTHYVMQIV-INPKDNNTFASASLDRTVKVWQLGSA---SPNFTLEGH 184
+ +C +VF GH V +I+ + KD A+ D T GS+ P T
Sbjct: 451 -RTNSCLKVFRGHVGQVQKIIPLTIKDVENLAT---DNTSD----GSSPQDDPTMTDGAD 502
Query: 185 EKGVNCVDYYHGGDK--PY---LISGADDRLVKIWDYQNKTCVQT 224
E + D+ PY L+S D +K+WD + C++T
Sbjct: 503 ESDTPSNEQETVLDENIPYPTHLLSCGLDNTIKLWDVKTGKCIRT 547
Score = 122 (48.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 31/120 (25%), Positives = 56/120 (46%)
Query: 105 VAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLD 164
+ T+P+ + + ++ NW K Q F+GH V+ + N + + S D
Sbjct: 266 IQTQTTRPWKVIYRERFKVES-NWRKGHCRIQEFKGHMDGVLTLQFNYR---LLFTGSYD 321
Query: 165 RTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
T+ +W L + L GH GV + Y+ D LI+G+ D+ +++W+Y C+ T
Sbjct: 322 STIGIWDLFTGKLIRRLSGHSDGVKTL-YF---DDRKLITGSLDKTIRVWNYITGECIST 377
Score = 37 (18.1 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 46 TNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDD 78
+N N S E+ D A P K ++TGS D
Sbjct: 22 SNSN-NSSEMTD----TAMMPPLKRLLITGSSD 49
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 191 (72.3 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 52/206 (25%), Positives = 91/206 (44%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L S V P ++L+S +G V +W+ +T + ++ + PV +F P
Sbjct: 537 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 596
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+ V+G D ++ + + F H V C HP ++ T S D ++LW+
Sbjct: 597 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 656
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTF-ASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
C ++F GH + + +P N F A+ + D V +W +G L+GH V
Sbjct: 657 G-NCVRIFTGHKGPIHSLTFSP--NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVC 713
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWD 215
+ + G+ L SG+ D V++WD
Sbjct: 714 SLRFSRDGE--ILASGSMDNTVRLWD 737
Score = 184 (69.8 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 46/177 (25%), Positives = 80/177 (45%)
Query: 47 NQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVA 106
+ V+ + V +R+ K + I SDD+ + + T HS V +
Sbjct: 489 DSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGAS 548
Query: 107 VHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRT 166
P + +LL+SS+D ++LW+ + + C ++GH + V +P F S DR
Sbjct: 549 FSPDRNYLLSSSEDGTVRLWSLQ-TFTCLVGYKGHNYPVWDTQFSPY-GYYFVSGGHDRV 606
Query: 167 VKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
++W P GH VNC ++ + Y+ +G+ DR V++WD N CV+
Sbjct: 607 ARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNCVR 661
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 188 (71.2 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 58/222 (26%), Positives = 108/222 (48%)
Query: 9 RKLTARSDRVK--CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+++ RS+ K C + E +++ L + + +W+ + + +K V ++
Sbjct: 204 QRIQCRSENSKGVYCLQYDDEK-IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD 262
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
R IVTGS D V V++ NT E ++ H++ V + + + ++T S D I +W
Sbjct: 263 ERV--IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVW 318
Query: 127 NWEKAW--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+ ++V GH V + D+ SAS DRT+KVW + TL GH
Sbjct: 319 DMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH 375
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++G+ C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 376 KRGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 413
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V++ +T E + H + C+ +++ S D I+LW+ E
Sbjct: 348 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 404
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 405 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 461
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
H V + + D+ +IS + D + IWD+ N
Sbjct: 462 VEHSGRVFRLQF----DEFQIISSSHDDTILIWDFLN 494
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 55/220 (25%), Positives = 94/220 (42%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAK 64
L+ + LT + V C L E ++ + V VW+ T + + + + V +
Sbjct: 243 LECLKVLTGHTGSVLC--LQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR 300
Query: 65 FVPRKNWIVTGSDDMQVCVFNYN-----TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
F +VT S D + V++ TL R H V V +++++S
Sbjct: 301 F--SNGLMVTCSKDRSIAVWDMASPTDITLRRV--LVGHRAAVNVVDFD--DKYIVSASG 354
Query: 120 DMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
D IK+W+ C+ V GH + + +D S S D T+++W + +
Sbjct: 355 DRTIKVWSTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGAC 408
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
LEGHE+ V C+ + D ++SGA D +K+WD Q
Sbjct: 409 LRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQ 444
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 191 (72.3 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 52/206 (25%), Positives = 91/206 (44%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L S V P ++L+S +G V +W+ +T + ++ + PV +F P
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 598
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+ V+G D ++ + + F H V C HP ++ T S D ++LW+
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 658
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTF-ASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
C ++F GH + + +P N F A+ + D V +W +G L+GH V
Sbjct: 659 G-NCVRIFTGHKGPIHSLTFSP--NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVC 715
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWD 215
+ + G+ L SG+ D V++WD
Sbjct: 716 SLRFSRDGE--ILASGSMDNTVRLWD 739
Score = 184 (69.8 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 46/177 (25%), Positives = 80/177 (45%)
Query: 47 NQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVA 106
+ V+ + V +R+ K + I SDD+ + + T HS V +
Sbjct: 491 DSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGAS 550
Query: 107 VHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRT 166
P + +LL+SS+D ++LW+ + + C ++GH + V +P F S DR
Sbjct: 551 FSPDRNYLLSSSEDGTVRLWSLQ-TFTCLVGYKGHNYPVWDTQFSPY-GYYFVSGGHDRV 608
Query: 167 VKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
++W P GH VNC ++ + Y+ +G+ DR V++WD N CV+
Sbjct: 609 ARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNCVR 663
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 191 (72.3 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 52/206 (25%), Positives = 91/206 (44%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L S V P ++L+S +G V +W+ +T + ++ + PV +F P
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 598
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+ V+G D ++ + + F H V C HP ++ T S D ++LW+
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 658
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTF-ASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
C ++F GH + + +P N F A+ + D V +W +G L+GH V
Sbjct: 659 G-NCVRIFTGHKGPIHSLTFSP--NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVC 715
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWD 215
+ + G+ L SG+ D V++WD
Sbjct: 716 SLRFSRDGE--ILASGSMDNTVRLWD 739
Score = 184 (69.8 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 46/177 (25%), Positives = 80/177 (45%)
Query: 47 NQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVA 106
+ V+ + V +R+ K + I SDD+ + + T HS V +
Sbjct: 491 DSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGAS 550
Query: 107 VHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRT 166
P + +LL+SS+D ++LW+ + + C ++GH + V +P F S DR
Sbjct: 551 FSPDRNYLLSSSEDGTVRLWSLQ-TFTCLVGYKGHNYPVWDTQFSPY-GYYFVSGGHDRV 608
Query: 167 VKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
++W P GH VNC ++ + Y+ +G+ DR V++WD N CV+
Sbjct: 609 ARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNCVR 663
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 191 (72.3 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 52/206 (25%), Positives = 91/206 (44%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L S V P ++L+S +G V +W+ +T + ++ + PV +F P
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 599
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+ V+G D ++ + + F H V C HP ++ T S D ++LW+
Sbjct: 600 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLN 659
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTF-ASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
C ++F GH + + +P N F A+ + D V +W +G L+GH V
Sbjct: 660 G-NCVRIFTGHKGPIHSLTFSP--NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVC 716
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWD 215
+ + G+ L SG+ D V++WD
Sbjct: 717 SLRFSRDGE--ILASGSMDNTVRLWD 740
Score = 188 (71.2 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 47/177 (26%), Positives = 80/177 (45%)
Query: 47 NQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVA 106
+ V+ + V +R+ K + I SDD+ + + T HS V +
Sbjct: 492 DSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGAS 551
Query: 107 VHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRT 166
P + +LL+SS+D ++LW+ + + C ++GH + V +P F S DR
Sbjct: 552 FSPDRNYLLSSSEDGTVRLWSLQ-TFTCLVGYKGHNYPVWDTQFSPY-GYYFVSGGHDRV 609
Query: 167 VKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
++W P GH VNC Y+ + Y+ +G+ DR V++WD N CV+
Sbjct: 610 ARLWATDHYQPLRIFAGHLADVNCTRYHPNSN--YVATGSADRTVRLWDVLNGNCVR 664
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 191 (72.3 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 52/206 (25%), Positives = 91/206 (44%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L S V P ++L+S +G V +W+ +T + ++ + PV +F P
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 599
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+ V+G D ++ + + F H V C HP ++ T S D ++LW+
Sbjct: 600 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 659
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTF-ASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
C ++F GH + + +P N F A+ + D V +W +G L+GH V
Sbjct: 660 G-NCVRIFTGHKGPIHSLTFSP--NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVC 716
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWD 215
+ + G+ L SG+ D V++WD
Sbjct: 717 SLRFSRDGE--ILASGSMDNTVRLWD 740
Score = 184 (69.8 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 46/177 (25%), Positives = 80/177 (45%)
Query: 47 NQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVA 106
+ V+ + V +R+ K + I SDD+ + + T HS V +
Sbjct: 492 DSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGAS 551
Query: 107 VHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRT 166
P + +LL+SS+D ++LW+ + + C ++GH + V +P F S DR
Sbjct: 552 FSPDRNYLLSSSEDGTVRLWSLQ-TFTCLVGYKGHNYPVWDTQFSPY-GYYFVSGGHDRV 609
Query: 167 VKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
++W P GH VNC ++ + Y+ +G+ DR V++WD N CV+
Sbjct: 610 ARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNCVR 664
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 190 (71.9 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 67/226 (29%), Positives = 101/226 (44%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGH-VHVWN-HETNQNV--KSFEVCDLPVRAAKFV 66
L +D V D+ + W+ AS V +W ++ Q + +SF V K
Sbjct: 280 LHGHTDIVLALDVF-RKGWLFASCAKDQSVRIWRMNKAGQVMLKESFLVTGSQDCTVKLW 338
Query: 67 PRKNWIV---TGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI 123
P ++ T D+ + + T +R H + +S VA+ P L T S D
Sbjct: 339 PLPKALLSKNTAPDNGPI-LLQAQTTQRCHDKDINS-----VAIAPNDKLLATGSQDRTA 392
Query: 124 KLWNWEKAWACQQ--VFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL 181
KLW + CQ VF GH + + +P D A+AS D T+K+W L S T
Sbjct: 393 KLWALPQ---CQLLGVFSGHRRGLWCVQFSPMDQ-VLATASADGTIKLWALQDFSCLKTF 448
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
EGH+ V V + G + L+S D LVK+W +N CV+TL++
Sbjct: 449 EGHDASVLKVAFVSRGTQ--LLSSGSDGLVKLWTIKNNECVRTLDA 492
Score = 148 (57.2 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 42/158 (26%), Positives = 68/158 (43%)
Query: 57 DLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLT 116
D + + P + TGS D ++ + F H + CV P L T
Sbjct: 368 DKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLAT 427
Query: 117 SSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
+S D IKLW + ++C + FEGH V+++ + +S S D VK+W + +
Sbjct: 428 ASADGTIKLWALQD-FSCLKTFEGHDASVLKVAFVSRGTQLLSSGS-DGLVKLWTIKNNE 485
Query: 177 PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
TL+ HE V + D + ++GA D V +W
Sbjct: 486 CVRTLDAHEDKVWGLHCSRLDD--HALTGASDSRVILW 521
Score = 131 (51.2 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 45/176 (25%), Positives = 71/176 (40%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHP--TQPFLLT 116
PV F P + TG D V V++ H F V VA HP T+ L +
Sbjct: 19 PVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFS 78
Query: 117 SSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
S+ D I++W+ + +C V H V + + D +T S+ D+ +W L S
Sbjct: 79 SATDAAIRVWSLQDR-SCLAVLTAHYSAVTSLAFSA-DGHTMLSSGRDKICIIWDLQSCQ 136
Query: 177 PNFTL---EGHEKGVNCVDY---YHGGDKP--YLISGADDRLVKIWDYQNKTCVQT 224
T+ E E V + G P Y ++ D +++W+ + CV T
Sbjct: 137 ATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQGTLRVWEAASGQCVYT 192
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 190 (71.9 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 52/186 (27%), Positives = 89/186 (47%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
VWN ET + + + VR ++ +V+GS D + V++ T + H H
Sbjct: 445 VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 502
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
VRCV + +++ + D ++K+W+ E C +GHT+ V + D S
Sbjct: 503 AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 556
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 220
SLD +++VW + + + TL GH+ + ++ L+SG D VKIWD +
Sbjct: 557 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 612
Query: 221 CVQTLE 226
C+QTL+
Sbjct: 613 CLQTLQ 618
Score = 186 (70.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 46/158 (29%), Positives = 78/158 (49%)
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
R N I++GS D + V+N T E H+ H+ VRC+ +H + +++ S D +++W+
Sbjct: 430 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 487
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
E C V GH V + D S + D VKVW + + TL+GH
Sbjct: 488 IETG-QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 543
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
V + + D +++SG+ D +++WD + C+ TL
Sbjct: 544 VYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTL 577
Score = 185 (70.2 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 59/224 (26%), Positives = 106/224 (47%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L + V+C LH E +++ + + VW+ ET Q + VR ++ R+
Sbjct: 457 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 513
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+V+G+ D V V++ T H+ + H++ V + +++ S D I++W+ E
Sbjct: 514 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 570
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG---HEKG 187
C GH + + KDN S + D TVK+W + + TL+G H+
Sbjct: 571 G-NCIHTLTGHQSLTSGMEL--KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 626
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ---TLESG 228
V C+ + +K ++I+ +DD VK+WD + ++ TLESG
Sbjct: 627 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 666
Score = 182 (69.1 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 49/157 (31%), Positives = 77/157 (49%)
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
N IV+GSDD + V++ T + + H+ V + +++ S D +K+WN E
Sbjct: 392 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 449
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
C GHT V + ++ K S S D T++VW + + L GH V
Sbjct: 450 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 505
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
CV Y D ++SGA D +VK+WD + +TC+ TL+
Sbjct: 506 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQ 538
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 190 (71.9 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 52/186 (27%), Positives = 89/186 (47%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
VWN ET + + + VR ++ +V+GS D + V++ T + H H
Sbjct: 450 VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 507
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
VRCV + +++ + D ++K+W+ E C +GHT+ V + D S
Sbjct: 508 AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 561
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 220
SLD +++VW + + + TL GH+ + ++ L+SG D VKIWD +
Sbjct: 562 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 617
Query: 221 CVQTLE 226
C+QTL+
Sbjct: 618 CLQTLQ 623
Score = 186 (70.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 46/158 (29%), Positives = 78/158 (49%)
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
R N I++GS D + V+N T E H+ H+ VRC+ +H + +++ S D +++W+
Sbjct: 435 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 492
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
E C V GH V + D S + D VKVW + + TL+GH
Sbjct: 493 IETG-QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 548
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
V + + D +++SG+ D +++WD + C+ TL
Sbjct: 549 VYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTL 582
Score = 185 (70.2 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 59/224 (26%), Positives = 106/224 (47%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L + V+C LH E +++ + + VW+ ET Q + VR ++ R+
Sbjct: 462 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 518
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+V+G+ D V V++ T H+ + H++ V + +++ S D I++W+ E
Sbjct: 519 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 575
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG---HEKG 187
C GH + + KDN S + D TVK+W + + TL+G H+
Sbjct: 576 G-NCIHTLTGHQSLTSGMEL--KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 631
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ---TLESG 228
V C+ + +K ++I+ +DD VK+WD + ++ TLESG
Sbjct: 632 VTCLQF----NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 671
Score = 182 (69.1 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 49/157 (31%), Positives = 77/157 (49%)
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
N IV+GSDD + V++ T + + H+ V + +++ S D +K+WN E
Sbjct: 397 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 454
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
C GHT V + ++ K S S D T++VW + + L GH V
Sbjct: 455 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 510
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
CV Y D ++SGA D +VK+WD + +TC+ TL+
Sbjct: 511 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQ 543
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 194 (73.4 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 56/215 (26%), Positives = 90/215 (41%)
Query: 3 LRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRA 62
L + + L A V+ + WML + + G+V W N NVK F+ +R
Sbjct: 150 LTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMN-NVKMFQAHKEAIRE 208
Query: 63 AKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDML 122
A F P N T SDD V ++++ H V+CV HPT+ +++ S D
Sbjct: 209 ASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQ 268
Query: 123 --IKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
IK W+ K H + VM++ +N + N +AS D K++ + +
Sbjct: 269 QPIKFWD-PKTGQSLATLHAHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQ 326
Query: 181 L-EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIW 214
+ GH+K V + H + SG D + W
Sbjct: 327 VFRGHKKEATAVAW-HPVHEGLFASGGSDGSLLFW 360
Score = 154 (59.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 42/165 (25%), Positives = 74/165 (44%)
Query: 65 FVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIK 124
+ P +VTG+ + ++N T +AH VR + ++LT+ +K
Sbjct: 128 WTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVK 187
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
W + ++F+ H + + +P DN FA+ S D TV++W L GH
Sbjct: 188 YW--QSNMNNVKMFQAHKEAIREASFSPTDNK-FATCSDDGTVRIWDFLRCHEERILRGH 244
Query: 185 EKGVNCVDYYHGGDKPYLISGADD--RLVKIWDYQNKTCVQTLES 227
V CVD++ K ++SG+ D + +K WD + + TL +
Sbjct: 245 GADVKCVDWHP--TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHA 287
Score = 144 (55.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 45/185 (24%), Positives = 80/185 (43%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
+G +WN T + D PVRA + W++T V + N + F
Sbjct: 141 SGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSN-MNNVKMF 199
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDN 155
+AH + +R + PT T SDD +++W++ + +++ GH V + +P
Sbjct: 200 QAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWHPT-K 257
Query: 156 NTFASASLD--RTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
S S D + +K W + TL H+ V V G+ +L++ + D L K+
Sbjct: 258 GLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGN--WLLTASRDHLCKL 315
Query: 214 WDYQN 218
+D +N
Sbjct: 316 FDIRN 320
Score = 144 (55.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 49/205 (23%), Positives = 85/205 (41%)
Query: 13 ARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWI 72
A + ++ PT+ +G V +W+ + V+ + P K +
Sbjct: 201 AHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLV 260
Query: 73 VTGSDDMQ--VCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
V+GS D Q + ++ T + + AH + V V ++ +LLT+S D L KL++
Sbjct: 261 VSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRN 320
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-GHEKGVN 189
QVF GH + +P FAS D ++ W +G +E HE +
Sbjct: 321 LKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIW 380
Query: 190 CVDYYHGGDKPYLISGADDRLVKIW 214
+ ++ G L SG++D K W
Sbjct: 381 SLAWHPLGH--ILCSGSNDHTSKFW 403
>MGI|MGI:1920393 [details] [associations]
symbol:Wdr37 "WD repeat domain 37" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920393 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00640000091456
EMBL:AK129254 EMBL:AK032582 EMBL:AK036203 EMBL:BC046236
IPI:IPI00387421 RefSeq:NP_001034477.1 RefSeq:NP_766033.1
UniGene:Mm.284654 ProteinModelPortal:Q8CBE3 SMR:Q8CBE3
IntAct:Q8CBE3 STRING:Q8CBE3 PhosphoSite:Q8CBE3 PaxDb:Q8CBE3
PRIDE:Q8CBE3 Ensembl:ENSMUST00000021572 Ensembl:ENSMUST00000054251
GeneID:207615 KEGG:mmu:207615 UCSC:uc007pki.1 CTD:22884
HOGENOM:HOG000013185 HOVERGEN:HBG057072 InParanoid:Q8CBE3
OMA:TGLPRDM OrthoDB:EOG4DZ1V5 NextBio:371979 Bgee:Q8CBE3
CleanEx:MM_WDR37 Genevestigator:Q8CBE3
GermOnline:ENSMUSG00000021147 Uniprot:Q8CBE3
Length = 496
Score = 170 (64.9 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 50/158 (31%), Positives = 77/158 (48%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
V AA ++ +VT S D +++ T E HS H + HPTQ ++TSS
Sbjct: 286 VIAADWLVGGKQVVTASWDRTANLYDVETSELVHSLTGHDQELTHCCTHPTQRLVVTSSR 345
Query: 120 DMLIKLWNW-EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SP 177
D +LW++ + + VF+GHT V V DN S S DRTVKVW L + SP
Sbjct: 346 DTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVGDN--VVSGSDDRTVKVWDLKNMRSP 403
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T+ + +N ++ G + + D+R V+++D
Sbjct: 404 IATIRT-DSAINRINVCVG--QKIIALPHDNRQVRLFD 438
Score = 39 (18.8 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNH 44
V HP+E L + + H+W +
Sbjct: 202 VNSIKFHPSEQLALTASGDQTAHIWRY 228
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 190 (71.9 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 52/186 (27%), Positives = 89/186 (47%)
Query: 41 VWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD 100
VWN ET + + + VR ++ +V+GS D + V++ T + H H
Sbjct: 498 VWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVA 555
Query: 101 YVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFAS 160
VRCV + +++ + D ++K+W+ E C +GHT+ V + D S
Sbjct: 556 AVRCVQYDGRR--VVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF---DGIHVVS 609
Query: 161 ASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 220
SLD +++VW + + + TL GH+ + ++ L+SG D VKIWD +
Sbjct: 610 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQ 665
Query: 221 CVQTLE 226
C+QTL+
Sbjct: 666 CLQTLQ 671
Score = 186 (70.5 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 46/158 (29%), Positives = 78/158 (49%)
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
R N I++GS D + V+N T E H+ H+ VRC+ +H + +++ S D +++W+
Sbjct: 483 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 540
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
E C V GH V + D S + D VKVW + + TL+GH
Sbjct: 541 IETG-QCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 596
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
V + + D +++SG+ D +++WD + C+ TL
Sbjct: 597 VYSLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTL 630
Score = 185 (70.2 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 59/224 (26%), Positives = 106/224 (47%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
L + V+C LH E +++ + + VW+ ET Q + VR ++ R+
Sbjct: 510 LYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR- 566
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+V+G+ D V V++ T H+ + H++ V + +++ S D I++W+ E
Sbjct: 567 -VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 623
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG---HEKG 187
C GH + + KDN S + D TVK+W + + TL+G H+
Sbjct: 624 G-NCIHTLTGHQSLTSGMEL--KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSA 679
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ---TLESG 228
V C+ + +K ++I+ +DD VK+WD + ++ TLESG
Sbjct: 680 VTCLQF----NKNFVITSSDDGTVKLWDLRTGEFIRNLVTLESG 719
Score = 182 (69.1 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 49/157 (31%), Positives = 77/157 (49%)
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
N IV+GSDD + V++ T + + H+ V + +++ S D +K+WN E
Sbjct: 445 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE 502
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
C GHT V + ++ K S S D T++VW + + L GH V
Sbjct: 503 TG-ECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 558
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
CV Y D ++SGA D +VK+WD + +TC+ TL+
Sbjct: 559 CVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQ 591
>FB|FBgn0001105 [details] [associations]
symbol:Gbeta13F "G protein beta-subunit 13F" species:7227
"Drosophila melanogaster" [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS;NAS] [GO:0003924 "GTPase activity"
evidence=ISS;NAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS;NAS] [GO:0055059 "asymmetric neuroblast
division" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005886 GO:GO:0005875 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 ChiTaRS:Gbeta13F EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0045176
PRINTS:PR00319 GO:GO:0055059 GeneTree:ENSGT00550000074331 KO:K04536
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:M22567
EMBL:AY058566 PIR:A40489 RefSeq:NP_525090.1 RefSeq:NP_727907.1
RefSeq:NP_996459.1 RefSeq:NP_996460.1 RefSeq:NP_996461.1
RefSeq:NP_996462.1 UniGene:Dm.7041 ProteinModelPortal:P26308
SMR:P26308 DIP:DIP-18432N MINT:MINT-1016369 STRING:P26308
PaxDb:P26308 PRIDE:P26308 EnsemblMetazoa:FBtr0074106
EnsemblMetazoa:FBtr0074107 EnsemblMetazoa:FBtr0074108
EnsemblMetazoa:FBtr0074110 EnsemblMetazoa:FBtr0074111
EnsemblMetazoa:FBtr0331597 GeneID:32544 KEGG:dme:Dmel_CG10545
CTD:32544 FlyBase:FBgn0001105 InParanoid:P26308 OrthoDB:EOG4NS1T0
PhylomeDB:P26308 GenomeRNAi:32544 NextBio:779043 Bgee:P26308
GermOnline:CG10545 Uniprot:P26308
Length = 340
Score = 183 (69.5 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 55/218 (25%), Positives = 91/218 (41%)
Query: 4 RLDIKRKLTARSDRVKCCDLH-PTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
R+ ++ + T R K +H + L S +G + VW+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLE---RF-HSFEAHSDYVRCVAVHPTQPFLLTS 117
+ P +++ G D ++N T E R H Y+ C ++TS
Sbjct: 102 TCAYAPSGSYVACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDNQ-IVTS 160
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
S DM LW+ E F GHT VM + + P+ TF S + D + K+W +
Sbjct: 161 SGDMSCGLWDIETGLQVTS-FLGHTGDVMALSLAPQCK-TFVSGACDASAKLWDIREGVC 218
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
T GHE +N V ++ G +G+DD +++D
Sbjct: 219 KQTFPGHESDINAVTFFPNGQA--FATGSDDATCRLFD 254
Score = 111 (44.1 bits), Expect = 0.00056, P = 0.00056
Identities = 45/212 (21%), Positives = 80/212 (37%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+ R+L + CC ++ S + +W+ ET V SF V A
Sbjct: 135 VSRELPGHGGYLSCCRFLDDNQ-IVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLA 193
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P+ V+G+ D +++ +F H + V P T SDD +L+
Sbjct: 194 PQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLF 253
Query: 127 NWEKAWACQQV-FEGHTHYVMQI--VINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
+ A Q++ H + + I V K + D VW A + L G
Sbjct: 254 DIR---ADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAG 310
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
H+ V+C+ G + +G+ D +++W+
Sbjct: 311 HDNRVSCLGVTENGMA--VATGSWDSFLRVWN 340
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 189 (71.6 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 51/189 (26%), Positives = 85/189 (44%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
V++W+ + S PV + + + IV GS + V++ + + H
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
+ + HP F+ + S D IKLW+ + C + GH+ V + +P D
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRK-GCVFRYRGHSQAVRCLRFSP-DGKWL 162
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI-SGADDRLVKIWDYQ 217
ASA+ D TVK+W L + GH VN V++ H + YL+ SG+ DR ++ WD +
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF-HPNE--YLLASGSSDRTIRFWDLE 219
Query: 218 NKTCVQTLE 226
V +E
Sbjct: 220 KFQVVSCIE 228
Score = 187 (70.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 53/211 (25%), Positives = 95/211 (45%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V+ L+ E ++A +G + VW+ E + +++ + + F P
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
++ +GS D + +++ + HS VRC+ P +L +++DD +KLW+
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT- 177
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
A F GHT V + +P + AS S DRT++ W L +EG V
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRS 236
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
V + D L SG D L +++ ++ + C
Sbjct: 237 VLF--NPDGCCLYSGCQDSL-RVYGWEPERC 264
Score = 162 (62.1 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 39/144 (27%), Positives = 66/144 (45%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+ TG DD +V +++ N S H+ V V ++ + ++ S I++W+ E A
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+ + GH + + +P AS S D +K+W + F GH + V C+
Sbjct: 96 KILRTLM-GHKANICSLDFHPY-GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 153
Query: 192 DYYHGGDKPYLISGADDRLVKIWD 215
+ D +L S ADD VK+WD
Sbjct: 154 RF--SPDGKWLASAADDHTVKLWD 175
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/146 (23%), Positives = 60/146 (41%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
I R L + D HP ++ + + ++ +W+ V + VR +F
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P W+ + +DD V +++ + F H+ V V HP + L + S D I+ W
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINP 152
+ EK + EG V ++ NP
Sbjct: 217 DLEK-FQVVSCIEGEPGPVRSVLFNP 241
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 189 (71.6 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 51/189 (26%), Positives = 85/189 (44%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
V++W+ + S PV + + + IV GS + V++ + + H
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
+ + HP F+ + S D IKLW+ + C + GH+ V + +P D
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRK-GCVFRYRGHSQAVRCLRFSP-DGKWL 162
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI-SGADDRLVKIWDYQ 217
ASA+ D TVK+W L + GH VN V++ H + YL+ SG+ DR ++ WD +
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF-HPNE--YLLASGSSDRTIRFWDLE 219
Query: 218 NKTCVQTLE 226
V +E
Sbjct: 220 KFQVVSCIE 228
Score = 187 (70.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 53/211 (25%), Positives = 95/211 (45%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V+ L+ E ++A +G + VW+ E + +++ + + F P
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
++ +GS D + +++ + HS VRC+ P +L +++DD +KLW+
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT- 177
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
A F GHT V + +P + AS S DRT++ W L +EG V
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRS 236
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
V + D L SG D L +++ ++ + C
Sbjct: 237 VLF--NPDGCCLYSGCQDSL-RVYGWEPERC 264
Score = 162 (62.1 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 39/144 (27%), Positives = 66/144 (45%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+ TG DD +V +++ N S H+ V V ++ + ++ S I++W+ E A
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+ + GH + + +P AS S D +K+W + F GH + V C+
Sbjct: 96 KILRTLM-GHKANICSLDFHPY-GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 153
Query: 192 DYYHGGDKPYLISGADDRLVKIWD 215
+ D +L S ADD VK+WD
Sbjct: 154 RF--SPDGKWLASAADDHTVKLWD 175
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/146 (23%), Positives = 60/146 (41%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
I R L + D HP ++ + + ++ +W+ V + VR +F
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P W+ + +DD V +++ + F H+ V V HP + L + S D I+ W
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINP 152
+ EK + EG V ++ NP
Sbjct: 217 DLEK-FQVVSCIEGEPGPVRSVLFNP 241
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 189 (71.6 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 51/189 (26%), Positives = 85/189 (44%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
V++W+ + S PV + + + IV GS + V++ + + H
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
+ + HP F+ + S D IKLW+ + C + GH+ V + +P D
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRK-GCVFRYRGHSQAVRCLRFSP-DGKWL 162
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI-SGADDRLVKIWDYQ 217
ASA+ D TVK+W L + GH VN V++ H + YL+ SG+ DR ++ WD +
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF-HPNE--YLLASGSSDRTIRFWDLE 219
Query: 218 NKTCVQTLE 226
V +E
Sbjct: 220 KFQVVSCIE 228
Score = 187 (70.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 53/211 (25%), Positives = 95/211 (45%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V+ L+ E ++A +G + VW+ E + +++ + + F P
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
++ +GS D + +++ + HS VRC+ P +L +++DD +KLW+
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT- 177
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
A F GHT V + +P + AS S DRT++ W L +EG V
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRS 236
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
V + D L SG D L +++ ++ + C
Sbjct: 237 VLF--NPDGCCLYSGCQDSL-RVYGWEPERC 264
Score = 162 (62.1 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 39/144 (27%), Positives = 66/144 (45%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+ TG DD +V +++ N S H+ V V ++ + ++ S I++W+ E A
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+ + GH + + +P AS S D +K+W + F GH + V C+
Sbjct: 96 KILRTLM-GHKANICSLDFHPY-GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 153
Query: 192 DYYHGGDKPYLISGADDRLVKIWD 215
+ D +L S ADD VK+WD
Sbjct: 154 RF--SPDGKWLASAADDHTVKLWD 175
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/146 (23%), Positives = 60/146 (41%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
I R L + D HP ++ + + ++ +W+ V + VR +F
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P W+ + +DD V +++ + F H+ V V HP + L + S D I+ W
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINP 152
+ EK + EG V ++ NP
Sbjct: 217 DLEK-FQVVSCIEGEPGPVRSVLFNP 241
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 189 (71.6 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 51/189 (26%), Positives = 85/189 (44%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
V++W+ + S PV + + + IV GS + V++ + + H
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
+ + HP F+ + S D IKLW+ + C + GH+ V + +P D
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRK-GCVFRYRGHSQAVRCLRFSP-DGKWL 162
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI-SGADDRLVKIWDYQ 217
ASA+ D TVK+W L + GH VN V++ H + YL+ SG+ DR ++ WD +
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF-HPNE--YLLASGSSDRTIRFWDLE 219
Query: 218 NKTCVQTLE 226
V +E
Sbjct: 220 KFQVVSCIE 228
Score = 187 (70.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 53/211 (25%), Positives = 95/211 (45%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V+ L+ E ++A +G + VW+ E + +++ + + F P
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
++ +GS D + +++ + HS VRC+ P +L +++DD +KLW+
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT- 177
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
A F GHT V + +P + AS S DRT++ W L +EG V
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRS 236
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
V + D L SG D L +++ ++ + C
Sbjct: 237 VLF--NPDGCCLYSGCQDSL-RVYGWEPERC 264
Score = 162 (62.1 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 39/144 (27%), Positives = 66/144 (45%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+ TG DD +V +++ N S H+ V V ++ + ++ S I++W+ E A
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+ + GH + + +P AS S D +K+W + F GH + V C+
Sbjct: 96 KILRTLM-GHKANICSLDFHPY-GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 153
Query: 192 DYYHGGDKPYLISGADDRLVKIWD 215
+ D +L S ADD VK+WD
Sbjct: 154 RF--SPDGKWLASAADDHTVKLWD 175
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/146 (23%), Positives = 60/146 (41%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
I R L + D HP ++ + + ++ +W+ V + VR +F
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P W+ + +DD V +++ + F H+ V V HP + L + S D I+ W
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINP 152
+ EK + EG V ++ NP
Sbjct: 217 DLEK-FQVVSCIEGEPGPVRSVLFNP 241
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 189 (71.6 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 51/189 (26%), Positives = 85/189 (44%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
V++W+ + S PV + + + IV GS + V++ + + H
Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH 104
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
+ + HP F+ + S D IKLW+ + C + GH+ V + +P D
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRK-GCVFRYRGHSQAVRCLRFSP-DGKWL 162
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI-SGADDRLVKIWDYQ 217
ASA+ D TVK+W L + GH VN V++ H + YL+ SG+ DR ++ WD +
Sbjct: 163 ASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF-HPNE--YLLASGSSDRTIRFWDLE 219
Query: 218 NKTCVQTLE 226
V +E
Sbjct: 220 KFQVVSCIE 228
Score = 186 (70.5 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 52/211 (24%), Positives = 95/211 (45%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + V+ L+ E ++A +G + VW+ E + +++ + + F P
Sbjct: 59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE 118
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
++ +GS D + +++ + HS VRC+ P +L +++DD +KLW+
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT- 177
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
A F GHT V + +P + AS S DRT++ W L +EG V
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRS 236
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
+ + D L SG D L +++ ++ + C
Sbjct: 237 ILF--NPDGCCLYSGCQDSL-RVYGWEPERC 264
Score = 162 (62.1 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 39/144 (27%), Positives = 66/144 (45%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+ TG DD +V +++ N S H+ V V ++ + ++ S I++W+ E A
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+ + GH + + +P AS S D +K+W + F GH + V C+
Sbjct: 96 KILRTLM-GHKANICSLDFHPY-GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 153
Query: 192 DYYHGGDKPYLISGADDRLVKIWD 215
+ D +L S ADD VK+WD
Sbjct: 154 RF--SPDGKWLASAADDHTVKLWD 175
Score = 139 (54.0 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 35/146 (23%), Positives = 60/146 (41%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
I R L + D HP ++ + + ++ +W+ V + VR +F
Sbjct: 97 ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P W+ + +DD V +++ + F H+ V V HP + L + S D I+ W
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINP 152
+ EK + EG V I+ NP
Sbjct: 217 DLEK-FQVVSCIEGEPGPVRSILFNP 241
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 171 (65.3 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 44/166 (26%), Positives = 74/166 (44%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSD 119
VR P W TG+ D + +++ + + S H VR VAV P+L + +
Sbjct: 175 VRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGE 234
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D +K W+ E + + GH V + ++P + A++ D T ++W + + +
Sbjct: 235 DRQVKCWDLEYNKVIRH-YHGHLSAVYSLALHPTID-VLATSGRDSTARIWDMRTKANVH 292
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
TL GH V V P +I+G+ D V++WD V TL
Sbjct: 293 TLTGHTNTVASV--VAQATNPQIITGSHDSTVRLWDLAAGKSVCTL 336
Score = 168 (64.2 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 51/212 (24%), Positives = 89/212 (41%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+K LT V+ + P++ + + V W+ E N+ ++ + V +
Sbjct: 206 LKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALH 265
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
P + + T D +++ T H+ H++ V V T P ++T S D ++LW
Sbjct: 266 PTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLW 325
Query: 127 NWEKAWA-CQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
+ + C H V IV++P FASAS D +K W+ + GH
Sbjct: 326 DLAAGKSVC--TLTNHKKSVRSIVLHPS-LYMFASASPDN-IKQWRCPEGKFVQNISGHT 381
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
VNC+ G L+SG D+ + WD++
Sbjct: 382 SIVNCMAANSEG---VLVSGGDNGTMFFWDWR 410
Score = 149 (57.5 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 34/93 (36%), Positives = 44/93 (47%)
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
W W +V GH +V I + P N FA+ + DR +K+W L S +L GH
Sbjct: 158 WHAPWKLSRVISGHLGWVRCIAVEP-GNEWFATGAGDRVIKIWDLASGKLKLSLTGHVST 216
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQ-NK 219
V V PYL S +DR VK WD + NK
Sbjct: 217 VRGVAV--STKHPYLFSCGEDRQVKCWDLEYNK 247
Score = 37 (18.1 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 5/12 (41%), Positives = 9/12 (75%)
Query: 28 PWMLASLYNGHV 39
PW L+ + +GH+
Sbjct: 161 PWKLSRVISGHL 172
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 181 (68.8 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 54/225 (24%), Positives = 99/225 (44%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L S V + + L+ ++G + +W+ T + F V + F
Sbjct: 56 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 115
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFH-SFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIK 124
IV+GS D + ++N + ++ E+HS++V CV P + P +++ D L+K
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+WN + GHT Y+ + ++P D + AS D +W L +TL+G
Sbjct: 176 VWNLANC-KLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG 233
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ +N + + Y + A +KIWD + K V L+ +
Sbjct: 234 DI-INALCF---SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 174 (66.3 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
NY +R + HS +V V + F L+ S D ++LW+ ++ F GHT
Sbjct: 51 NYGIPQR--ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR-FVGHTKD 107
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQ-LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
V+ + + DN S S D+T+K+W LG E H + V+CV + P ++
Sbjct: 108 VLSVAFS-SDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 166
Query: 204 SGADDRLVKIWDYQN 218
S D+LVK+W+ N
Sbjct: 167 SCGWDKLVKVWNLAN 181
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 181 (68.8 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 54/225 (24%), Positives = 99/225 (44%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L S V + + L+ ++G + +W+ T + F V + F
Sbjct: 56 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 115
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFH-SFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIK 124
IV+GS D + ++N + ++ E+HS++V CV P + P +++ D L+K
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+WN + GHT Y+ + ++P D + AS D +W L +TL+G
Sbjct: 176 VWNLANC-KLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG 233
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ +N + + Y + A +KIWD + K V L+ +
Sbjct: 234 DI-INALCF---SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 174 (66.3 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
NY +R + HS +V V + F L+ S D ++LW+ ++ F GHT
Sbjct: 51 NYGIPQR--ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR-FVGHTKD 107
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQ-LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
V+ + + DN S S D+T+K+W LG E H + V+CV + P ++
Sbjct: 108 VLSVAFS-SDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 166
Query: 204 SGADDRLVKIWDYQN 218
S D+LVK+W+ N
Sbjct: 167 SCGWDKLVKVWNLAN 181
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 181 (68.8 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 54/225 (24%), Positives = 99/225 (44%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L S V + + L+ ++G + +W+ T + F V + F
Sbjct: 56 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 115
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFH-SFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIK 124
IV+GS D + ++N + ++ E+HS++V CV P + P +++ D L+K
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+WN + GHT Y+ + ++P D + AS D +W L +TL+G
Sbjct: 176 VWNLANC-KLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG 233
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ +N + + Y + A +KIWD + K V L+ +
Sbjct: 234 DI-INALCF---SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 174 (66.3 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
NY +R + HS +V V + F L+ S D ++LW+ ++ F GHT
Sbjct: 51 NYGIPQR--ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR-FVGHTKD 107
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQ-LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
V+ + + DN S S D+T+K+W LG E H + V+CV + P ++
Sbjct: 108 VLSVAFS-SDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 166
Query: 204 SGADDRLVKIWDYQN 218
S D+LVK+W+ N
Sbjct: 167 SCGWDKLVKVWNLAN 181
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 181 (68.8 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 54/225 (24%), Positives = 99/225 (44%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L S V + + L+ ++G + +W+ T + F V + F
Sbjct: 56 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 115
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFH-SFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIK 124
IV+GS D + ++N + ++ E+HS++V CV P + P +++ D L+K
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+WN + GHT Y+ + ++P D + AS D +W L +TL+G
Sbjct: 176 VWNLANC-KLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG 233
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ +N + + Y + A +KIWD + K V L+ +
Sbjct: 234 DI-INALCF---SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 174 (66.3 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
NY +R + HS +V V + F L+ S D ++LW+ ++ F GHT
Sbjct: 51 NYGIPQR--ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR-FVGHTKD 107
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQ-LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
V+ + + DN S S D+T+K+W LG E H + V+CV + P ++
Sbjct: 108 VLSVAFS-SDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 166
Query: 204 SGADDRLVKIWDYQN 218
S D+LVK+W+ N
Sbjct: 167 SCGWDKLVKVWNLAN 181
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 181 (68.8 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 54/225 (24%), Positives = 99/225 (44%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L S V + + L+ ++G + +W+ T + F V + F
Sbjct: 56 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 115
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFH-SFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIK 124
IV+GS D + ++N + ++ E+HS++V CV P + P +++ D L+K
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+WN + GHT Y+ + ++P D + AS D +W L +TL+G
Sbjct: 176 VWNLANC-KLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG 233
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ +N + + Y + A +KIWD + K V L+ +
Sbjct: 234 DI-INALCF---SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 174 (66.3 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
NY +R + HS +V V + F L+ S D ++LW+ ++ F GHT
Sbjct: 51 NYGIPQR--ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR-FVGHTKD 107
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQ-LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
V+ + + DN S S D+T+K+W LG E H + V+CV + P ++
Sbjct: 108 VLSVAFS-SDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 166
Query: 204 SGADDRLVKIWDYQN 218
S D+LVK+W+ N
Sbjct: 167 SCGWDKLVKVWNLAN 181
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 181 (68.8 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 54/225 (24%), Positives = 99/225 (44%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L S V + + L+ ++G + +W+ T + F V + F
Sbjct: 56 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 115
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFH-SFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIK 124
IV+GS D + ++N + ++ E+HS++V CV P + P +++ D L+K
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+WN + GHT Y+ + ++P D + AS D +W L +TL+G
Sbjct: 176 VWNLANC-KLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG 233
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ +N + + Y + A +KIWD + K V L+ +
Sbjct: 234 DI-INALCF---SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 174 (66.3 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
NY +R + HS +V V + F L+ S D ++LW+ ++ F GHT
Sbjct: 51 NYGIPQR--ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR-FVGHTKD 107
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQ-LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
V+ + + DN S S D+T+K+W LG E H + V+CV + P ++
Sbjct: 108 VLSVAFS-SDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 166
Query: 204 SGADDRLVKIWDYQN 218
S D+LVK+W+ N
Sbjct: 167 SCGWDKLVKVWNLAN 181
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 181 (68.8 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 54/225 (24%), Positives = 99/225 (44%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L S V + + L+ ++G + +W+ T + F V + F
Sbjct: 56 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 115
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFH-SFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIK 124
IV+GS D + ++N + ++ E+HS++V CV P + P +++ D L+K
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+WN + GHT Y+ + ++P D + AS D +W L +TL+G
Sbjct: 176 VWNLANC-KLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG 233
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ +N + + Y + A +KIWD + K V L+ +
Sbjct: 234 DI-INALCF---SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 174 (66.3 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
NY +R + HS +V V + F L+ S D ++LW+ ++ F GHT
Sbjct: 51 NYGIPQR--ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR-FVGHTKD 107
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQ-LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
V+ + + DN S S D+T+K+W LG E H + V+CV + P ++
Sbjct: 108 VLSVAFS-SDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 166
Query: 204 SGADDRLVKIWDYQN 218
S D+LVK+W+ N
Sbjct: 167 SCGWDKLVKVWNLAN 181
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 181 (68.8 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 54/225 (24%), Positives = 99/225 (44%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L S V + + L+ ++G + +W+ T + F V + F
Sbjct: 56 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 115
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFH-SFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIK 124
IV+GS D + ++N + ++ E+HS++V CV P + P +++ D L+K
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+WN + GHT Y+ + ++P D + AS D +W L +TL+G
Sbjct: 176 VWNLANC-KLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG 233
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ +N + + Y + A +KIWD + K V L+ +
Sbjct: 234 DI-INALCF---SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 174 (66.3 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
NY +R + HS +V V + F L+ S D ++LW+ ++ F GHT
Sbjct: 51 NYGIPQR--ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR-FVGHTKD 107
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQ-LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
V+ + + DN S S D+T+K+W LG E H + V+CV + P ++
Sbjct: 108 VLSVAFS-SDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 166
Query: 204 SGADDRLVKIWDYQN 218
S D+LVK+W+ N
Sbjct: 167 SCGWDKLVKVWNLAN 181
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 181 (68.8 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 54/225 (24%), Positives = 99/225 (44%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L S V + + L+ ++G + +W+ T + F V + F
Sbjct: 56 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 115
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFH-SFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIK 124
IV+GS D + ++N + ++ E+HS++V CV P + P +++ D L+K
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+WN + GHT Y+ + ++P D + AS D +W L +TL+G
Sbjct: 176 VWNLANC-KLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG 233
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ +N + + Y + A +KIWD + K V L+ +
Sbjct: 234 DI-INALCF---SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 174 (66.3 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
NY +R + HS +V V + F L+ S D ++LW+ ++ F GHT
Sbjct: 51 NYGIPQR--ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR-FVGHTKD 107
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQ-LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
V+ + + DN S S D+T+K+W LG E H + V+CV + P ++
Sbjct: 108 VLSVAFS-SDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 166
Query: 204 SGADDRLVKIWDYQN 218
S D+LVK+W+ N
Sbjct: 167 SCGWDKLVKVWNLAN 181
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 181 (68.8 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 54/225 (24%), Positives = 99/225 (44%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L S V + + L+ ++G + +W+ T + F V + F
Sbjct: 56 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 115
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFH-SFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIK 124
IV+GS D + ++N + ++ E+HS++V CV P + P +++ D L+K
Sbjct: 116 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 175
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+WN + GHT Y+ + ++P D + AS D +W L +TL+G
Sbjct: 176 VWNLANC-KLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG 233
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ +N + + Y + A +KIWD + K V L+ +
Sbjct: 234 DI-INALCF---SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 274
Score = 174 (66.3 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
NY +R + HS +V V + F L+ S D ++LW+ ++ F GHT
Sbjct: 51 NYGIPQR--ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR-FVGHTKD 107
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQ-LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
V+ + + DN S S D+T+K+W LG E H + V+CV + P ++
Sbjct: 108 VLSVAFS-SDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 166
Query: 204 SGADDRLVKIWDYQN 218
S D+LVK+W+ N
Sbjct: 167 SCGWDKLVKVWNLAN 181
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 182 (69.1 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 56/185 (30%), Positives = 86/185 (46%)
Query: 39 VHVWNHETNQNVKSFEVCD---LPVRAAKFVPRKNWIVTGSDDMQVCVF--NYNTLERFH 93
V +W E + + +C+ VR + P N++ + S D C++ N + E
Sbjct: 40 VRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVT 99
Query: 94 SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW--NWEKAWACQQVFEGHTHYVMQIVIN 151
+ E H + V+ VA P+ L T S D + +W + E + C V HT V +V +
Sbjct: 100 TLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159
Query: 152 PKDNNTFASASLDRTVKVWQLGSAS--PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDR 209
P ASAS D TVK+++ TLEGHE V + + G + L S +DDR
Sbjct: 160 PSQE-LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR--LASCSDDR 216
Query: 210 LVKIW 214
V+IW
Sbjct: 217 TVRIW 221
Score = 163 (62.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 46/172 (26%), Positives = 81/172 (47%)
Query: 25 PTEPWMLASLYNGHVHVW--NHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVC 82
P ++ ++ ++ +W N + + V + E + V++ + P N + T S D V
Sbjct: 71 PCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVW 130
Query: 83 VFNYNTLERFHS---FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA-WACQQVF 138
V+ + + + +H+ V+ V HP+Q L ++S D +KL+ E+ W C
Sbjct: 131 VWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATL 190
Query: 139 EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
EGH V + +P AS S DRTV++W+ L G+E+GV C
Sbjct: 191 EGHESTVWSLAFDPSGQR-LASCSDDRTVRIWRQ-------YLPGNEQGVAC 234
Score = 143 (55.4 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 44/140 (31%), Positives = 65/140 (46%)
Query: 97 AHSDYVRC--VAVHPTQPFLLTSSDDMLIKLWNWE-KAWACQQVF-EGHTHYVMQIVINP 152
AH D RC +A +P L + D +++W E +W C+ V EGH V ++ +P
Sbjct: 13 AHPDS-RCWFLAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSP 71
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNF--TLEGHEKGVNCVDYYHGGDKPYLISGADDRL 210
N ASAS D T +W+ TLEGHE V V + G+ L + + D+
Sbjct: 72 C-GNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGN--LLATCSRDKS 128
Query: 211 VKIWDYQNKT---CVQTLES 227
V +W+ + CV L S
Sbjct: 129 VWVWEVDEEDEYECVSVLNS 148
Score = 109 (43.4 bits), Expect = 0.00096, P = 0.00096
Identities = 39/137 (28%), Positives = 59/137 (43%)
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW-EKAWACQQVFEGHTHYVMQIVINPKD 154
E H VR VA P +L ++S D +W E + C EGH + V + P
Sbjct: 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPS- 116
Query: 155 NNTFASASLDRTVKVWQLGSASPN---FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLV 211
N A+ S D++V VW++ L H + V V +H + L S + D V
Sbjct: 117 GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV-VWHPSQE-LLASASYDDTV 174
Query: 212 KIW--DYQNKTCVQTLE 226
K++ + + C TLE
Sbjct: 175 KLYREEEDDWVCCATLE 191
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 181 (68.8 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 54/225 (24%), Positives = 99/225 (44%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R L S V + + L+ ++G + +W+ T + F V + F
Sbjct: 59 QRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 118
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFH-SFEAHSDYVRCVAVHP--TQPFLLTSSDDMLIK 124
IV+GS D + ++N + ++ E+HS++V CV P + P +++ D L+K
Sbjct: 119 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 178
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+WN + GHT Y+ + ++P D + AS D +W L +TL+G
Sbjct: 179 VWNLANC-KLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG 236
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ +N + + Y + A +KIWD + K V L+ +
Sbjct: 237 DI-INALCF---SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEV 277
Score = 174 (66.3 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 41/135 (30%), Positives = 65/135 (48%)
Query: 85 NYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY 144
NY +R + HS +V V + F L+ S D ++LW+ ++ F GHT
Sbjct: 54 NYGIPQR--ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR-FVGHTKD 110
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQ-LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
V+ + + DN S S D+T+K+W LG E H + V+CV + P ++
Sbjct: 111 VLSVAFS-SDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 169
Query: 204 SGADDRLVKIWDYQN 218
S D+LVK+W+ N
Sbjct: 170 SCGWDKLVKVWNLAN 184
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 186 (70.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 45/160 (28%), Positives = 78/160 (48%)
Query: 72 IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
+V+GS D V V++ N+ + HS V C+ + L++ S D I +W+W+
Sbjct: 234 MVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNR 293
Query: 132 WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN----FTLEGHEKG 187
+ V+ GHT V+ +V++ N S+S D T +VW+L + SP L GH
Sbjct: 294 RPLK-VYFGHTDNVLGVVVS---ENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLAS 349
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
VN V Y +++ + DR ++ WD C++ + +
Sbjct: 350 VNSVQY--SSKTGLIVTASSDRTLRTWDITTGHCIRIIHA 387
Score = 172 (65.6 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 50/227 (22%), Positives = 102/227 (44%)
Query: 3 LRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRA 62
+R + A D V C + M++ + V VW+ + + V
Sbjct: 209 IRFPADQDFRATLDSVYCVQYD--DEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLC 266
Query: 63 AKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDML 122
F R+N +V+GS D + ++++ + H+D V V V ++ ++++SS D
Sbjct: 267 LDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVV--SENYIISSSRDHT 324
Query: 123 IKLWNWEK---AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
++W + A AC V GH V + + K +AS DRT++ W + +
Sbjct: 325 ARVWRLDATSPAEACMHVLRGHLASVNSVQYSSK-TGLIVTASSDRTLRTWDITTGHCIR 383
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ H++G+ C Y +G +++SG+ D ++I++ + ++ L+
Sbjct: 384 IIHAHQRGIACAQY-NG---KFIVSGSSDLTIRIFEASSGKLLRMLQ 426
Score = 116 (45.9 bits), Expect = 0.00028, P = 0.00028
Identities = 47/220 (21%), Positives = 87/220 (39%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKS-FEVCDLPVRAAKFVPR 68
KL S V C D +++ + + +W+ + + +K F D V
Sbjct: 256 KLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTD---NVLGVVVS 312
Query: 69 KNWIVTGSDDMQVCVFNYNTLER----FHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIK 124
+N+I++ S D V+ + H H V V ++T+S D ++
Sbjct: 313 ENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLR 372
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
W+ C ++ H + N K S S D T+++++ S L+GH
Sbjct: 373 TWDITTGH-CIRIIHAHQRGIACAQYNGK---FIVSGSSDLTIRIFEASSGKLLRMLQGH 428
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN--KTCV 222
E + V + +K ++SG D V+IW++ + CV
Sbjct: 429 EDLIRTVRF--NDEK--IVSGGYDGTVRIWNFNTGEQHCV 464
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 181 (68.8 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 50/176 (28%), Positives = 85/176 (48%)
Query: 57 DLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHS-----FEAHSDYVRCVAVHPTQ 111
D+ A V + IVT S D + ++ ++ + HS +V+ V +
Sbjct: 16 DMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDG 75
Query: 112 PFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
F L+ S D ++LW+ + ++ F GHT V+ + + DN SAS DRT+K+W
Sbjct: 76 QFALSGSWDGELRLWDLATGESTRR-FVGHTKDVLSVAFST-DNRQIVSASRDRTIKLWN 133
Query: 172 -LGSASPNFT-LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
LG + +GH++ V+CV + P ++S + D+ VK+W+ QN TL
Sbjct: 134 TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTL 189
Score = 181 (68.8 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 50/223 (22%), Positives = 104/223 (46%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+R++T S V+ L + L+ ++G + +W+ T ++ + F V + F
Sbjct: 56 QRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFST 115
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEA--HSDYVRCVAVHPTQ--PFLLTSSDDMLI 123
IV+ S D + ++N ++ EA H ++V CV P P ++++S D +
Sbjct: 116 DNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTV 175
Query: 124 KLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
K+WN + + GH+ Y+ + ++P D + AS D + +W L ++LE
Sbjct: 176 KVWNLQNC-KLRNTLAGHSGYLNTVAVSP-DGSLCASGGKDGVILLWDLAEGKKLYSLEA 233
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++ + + Y + A + ++IWD ++K+ V+ L+
Sbjct: 234 GSI-IHSLCF---SPNRYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 158 (60.7 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 48/159 (30%), Positives = 75/159 (47%)
Query: 73 VTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW--EK 130
++GS D ++ +++ T E F H+ V VA ++++S D IKLWN E
Sbjct: 79 LSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGEC 138
Query: 131 AWACQQVFEGHTHYVMQIVINPKDN-NTFASASLDRTVKVWQLGSASPNFTLEGHEKGVN 189
+ + +GH +V + +P T SAS D+TVKVW L + TL GH +N
Sbjct: 139 KYTISEA-DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLN 197
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
V G SG D ++ +WD + +LE+G
Sbjct: 198 TVAVSPDGS--LCASGGKDGVILLWDLAEGKKLYSLEAG 234
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 186 (70.5 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 57/222 (25%), Positives = 110/222 (49%)
Query: 9 RKLTARSDRVK--CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+++ RS+ K C L + +++ L + + +W+ ++ + +K V ++
Sbjct: 216 QRIQCRSENSKGVYC-LQYDDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYD 274
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
R IVTGS D V V++ ++ E ++ H++ V + + ++T S D I +W
Sbjct: 275 ERV--IVTGSSDSTVRVWDVSSGEVLNTLIHHNEAV--LHLRFCNGLMVTCSKDRSIAVW 330
Query: 127 NWEKAW--ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+ A + ++V GH V + D+ SAS DRT+KVW + TL GH
Sbjct: 331 DMASATDISLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWSTSTCEFVRTLNGH 387
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
++G+ C+ Y D+ ++SG+ D +++WD + C++ LE
Sbjct: 388 KRGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLRVLE 425
Score = 134 (52.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+IV+ S D + V++ +T E + H + C+ +++ S D I+LW+ E
Sbjct: 360 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE- 416
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA-SPNF--------TL 181
AC +V EGH V I DN S + D +KVW L +A P TL
Sbjct: 417 CGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 473
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
H V + + D+ +IS + D + IWD+ N
Sbjct: 474 VEHSGRVFRLQF----DEFQIISSSHDDTILIWDFLN 506
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 50/216 (23%), Positives = 92/216 (42%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAK 64
L+ + LT + V C L E ++ + V VW+ + + + + + V +
Sbjct: 255 LECLKVLTGHTGSVLC--LQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLR 312
Query: 65 FVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCV-AVHPTQPFLLTSSDDMLI 123
F +VT S D + V++ + + V V +++++S D I
Sbjct: 313 FC--NGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI 370
Query: 124 KLWNWEKAWACQQV--FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL 181
K+W+ C+ V GH + + +D S S D T+++W + + L
Sbjct: 371 KVWSTS---TCEFVRTLNGHKRGIA--CLQYRDR-LVVSGSSDNTIRLWDIECGACLRVL 424
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
EGHE+ V C+ + D ++SGA D +K+WD Q
Sbjct: 425 EGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQ 456
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 187 (70.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 57/192 (29%), Positives = 82/192 (42%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNT---LERFHSF 95
V +W+ E + F + D V P ++ GS D V V++ +ER
Sbjct: 412 VRLWDIENGTALTVFTIED-GVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGP 470
Query: 96 EAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW-------NWE----KAWACQQVFEGHTHY 144
+ H D V VA P L+T S D IKLW N + K C + FEGH +
Sbjct: 471 DGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDF 530
Query: 145 VMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLIS 204
V+ + + P DN S S DR V+ W + S L+GH+ V V G + +
Sbjct: 531 VLSVALTP-DNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGG--FFAT 587
Query: 205 GADDRLVKIWDY 216
G+ D +IW Y
Sbjct: 588 GSGDMRARIWSY 599
Score = 172 (65.6 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 57/224 (25%), Positives = 100/224 (44%)
Query: 1 MPLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFE------ 54
+P LD+ T + + V CC + +A+ N +++ T + V +
Sbjct: 284 VPRVLDVDLVHTLQHESVVCCVRFSADGKYVATGCNRSAQIFDVNTGEKVCVLQDDNADT 343
Query: 55 VCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFL 114
DL +R+ F P ++ TG++D Q+ V++ T F H + + +
Sbjct: 344 TGDLYIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTI 403
Query: 115 LTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGS 174
+ S D ++LW+ E A VF V + I+P D A+ SLD++V+VW L
Sbjct: 404 ASGSGDRTVRLWDIENGTALT-VFTIEDG-VTTVAISP-DTKYVAAGSLDKSVRVWDLTQ 460
Query: 175 ASPNFTLEG---HEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
P LEG H+ V V + G L++G+ D+ +K+W+
Sbjct: 461 GCPVERLEGPDGHKDSVYSVAFSPNGRD--LVTGSLDKTIKLWE 502
Score = 152 (58.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 50/175 (28%), Positives = 81/175 (46%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERF-----HSFEAHSD-YVRCVAVHPTQPF 113
V +F ++ TG + +F+ NT E+ + + D Y+R V P +
Sbjct: 302 VCCVRFSADGKYVATGCN-RSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDGKY 360
Query: 114 LLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL- 172
L T ++D I++W+ Q F GH + + +D T AS S DRTV++W +
Sbjct: 361 LATGAEDKQIRVWDITTRTIRIQ-FAGHEQDIYSLDF-ARDGRTIASGSGDRTVRLWDIE 418
Query: 173 -GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
G+A FT+E GV V D Y+ +G+ D+ V++WD V+ LE
Sbjct: 419 NGTALTVFTIED---GVTTVAI--SPDTKYVAAGSLDKSVRVWDLTQGCPVERLE 468
Score = 125 (49.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
Y+ + +P D A+ + D+ ++VW + + + GHE+ + +D+ G +
Sbjct: 348 YIRSVCFSP-DGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRT--IA 404
Query: 204 SGADDRLVKIWDYQNKTC--VQTLESGI 229
SG+ DR V++WD +N T V T+E G+
Sbjct: 405 SGSGDRTVRLWDIENGTALTVFTIEDGV 432
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 181 (68.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 43/170 (25%), Positives = 78/170 (45%)
Query: 60 VRAAKFVPRKNWIVTGSDDMQVCVFN-YN-TLERFHSFEAHSDYVRCVAVHPTQPFLLTS 117
+ + KF P W+ + S D + ++ Y+ ER + E H + + +A + ++
Sbjct: 49 ISSVKFSPDGKWLASASADKTIKIWGAYDGKFER--TLEGHKEGISDIAWSQDSKLICSA 106
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP 177
SDD IK+W+ E + +GH YV + NP+ +N S S D V++W + +
Sbjct: 107 SDDKTIKIWDVESG-KMVKTLKGHKEYVFGVSFNPQ-SNLIVSGSFDENVRIWDVNTGEC 164
Query: 178 NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
+ H V V + G ++SG+ D V+IWD + T+ +
Sbjct: 165 TKMISAHSDPVTGVHFNRDGT--LVVSGSYDGTVRIWDTTTGQLLNTIST 212
Score = 165 (63.1 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 48/190 (25%), Positives = 89/190 (46%)
Query: 39 VHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAH 98
+ +W+ E+ + VK+ + V F P+ N IV+GS D V +++ NT E AH
Sbjct: 112 IKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAH 171
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
SD V V + +++ S D +++W+ + V + +P N F
Sbjct: 172 SDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSP--NGKF 229
Query: 159 ASA-SLDRTVKVWQLGSASPNF-TLEGHEKGVNCV-DYYHGGDKPYLISGADDRLVKIWD 215
A +LD T+++W + T GH+ C+ + ++++G++D L+ I++
Sbjct: 230 VLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYN 289
Query: 216 YQNKTCVQTL 225
Q + VQTL
Sbjct: 290 LQTREIVQTL 299
Score = 159 (61.0 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 42/220 (19%), Positives = 95/220 (43%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+K L + P W+ ++ + + +W + ++ E + +
Sbjct: 38 LKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWS 97
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
I + SDD + +++ + + + + H +YV V+ +P +++ S D +++W
Sbjct: 98 QDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIW 157
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE- 185
+ C ++ H+ V + N +D S S D TV++W + T+ +
Sbjct: 158 DVNTG-ECTKMISAHSDPVTGVHFN-RDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDG 215
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN-KTCVQT 224
K V+ V + G ++++G D +++W Y N K C++T
Sbjct: 216 KEVSFVKFSPNGK--FVLAGTLDNTLRLWSYNNNKKCLKT 253
Score = 147 (56.8 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 30/88 (34%), Positives = 49/88 (55%)
Query: 139 EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGD 198
+GH + + +P D ASAS D+T+K+W TLEGH++G++ D D
Sbjct: 43 KGHLKSISSVKFSP-DGKWLASASADKTIKIWGAYDGKFERTLEGHKEGIS--DIAWSQD 99
Query: 199 KPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ S +DD+ +KIWD ++ V+TL+
Sbjct: 100 SKLICSASDDKTIKIWDVESGKMVKTLK 127
Score = 146 (56.5 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 42/170 (24%), Positives = 83/170 (48%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCD-LPVRAAKFVP 67
+ ++A SD V + +++ Y+G V +W+ T Q + + D V KF P
Sbjct: 166 KMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSP 225
Query: 68 RKNWIVTGSDDMQVCVFNYNTLER-FHSFEAHSDYVRCV--AVHPT-QPFLLTSSDDMLI 123
+++ G+ D + +++YN ++ ++ H + C+ T +++T S+D LI
Sbjct: 226 NGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLI 285
Query: 124 KLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASL--DRTVKVWQ 171
++N + Q GH V+ + +P +N AS +L DR+VK+W+
Sbjct: 286 YIYNLQTR-EIVQTLAGHEDVVLTVACHPTEN-IIASGALEKDRSVKIWK 333
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 181 (68.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 58/185 (31%), Positives = 86/185 (46%)
Query: 39 VHVWNHETNQNV-KSF--EVCDLPVRAAKFVPRKNWIVTGSDDMQVCVF--NYNTLERFH 93
+ +W E + + KS E VR + P N++ + S D C++ N + E
Sbjct: 40 IRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVT 99
Query: 94 SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW--NWEKAWACQQVFEGHTHYVMQIVIN 151
+ E H + V+ VA P+ L T S D + +W + E + C V HT V +V +
Sbjct: 100 TLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWH 159
Query: 152 PKDNNTFASASLDRTVKVWQLGSAS--PNFTLEGHEKGVNCVDYYHGGDKPYLISGADDR 209
P ASAS D TVK++Q TLEGHE V + + G + L S +DDR
Sbjct: 160 PSQE-LLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQR--LASCSDDR 216
Query: 210 LVKIW 214
V+IW
Sbjct: 217 TVRIW 221
Score = 163 (62.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 47/172 (27%), Positives = 80/172 (46%)
Query: 25 PTEPWMLASLYNGHVHVW--NHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVC 82
P ++ ++ ++ +W N + + V + E + V++ + P N + T S D V
Sbjct: 71 PCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVW 130
Query: 83 VFNYNTLERFHS---FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE-KAWACQQVF 138
V+ + + + +H+ V+ V HP+Q L ++S D +KL+ E W C
Sbjct: 131 VWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATL 190
Query: 139 EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
EGH V I +P AS S DRTV++W+ L G+E+GV C
Sbjct: 191 EGHESTVWSIAFDPSGQR-LASCSDDRTVRIWRQ-------YLPGNEQGVAC 234
Score = 146 (56.5 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 45/140 (32%), Positives = 66/140 (47%)
Query: 97 AHSDYVRC--VAVHPTQPFLLTSSDDMLIKLWNWE-KAWACQQVF-EGHTHYVMQIVINP 152
AH D RC +A +P+ L + D I++W E +W C+ V EGH V ++ +P
Sbjct: 13 AHPDS-RCWFLAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP 71
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNF--TLEGHEKGVNCVDYYHGGDKPYLISGADDRL 210
N ASAS D T +W+ TLEGHE V V + G+ L + + D+
Sbjct: 72 C-GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN--LLATCSRDKS 128
Query: 211 VKIWDYQNKT---CVQTLES 227
V +W+ + CV L S
Sbjct: 129 VWVWEVDEEDEYECVSVLSS 148
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 187 (70.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 56/219 (25%), Positives = 96/219 (43%)
Query: 9 RKLTARSDRVKCCDLHPTEPWMLASLYNG-HVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+++ A S V L + +LA+ + V+VW+ V S P+ + +
Sbjct: 14 QEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISA 73
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
++ IV GS + V++ + + H + + HP F+ + S D IKLW+
Sbjct: 74 KEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWD 133
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
+ C ++ HT V + +P D ASA+ D TVK+W L + F GH
Sbjct: 134 VRRK-GCIFKYKSHTQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGP 191
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
VN V++ H + L SG+ ++ WD + V +E
Sbjct: 192 VNVVEF-HPSIEYLLASGSSSMTIRFWDLEKFHVVSCIE 229
Score = 157 (60.3 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 45/211 (21%), Positives = 92/211 (43%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
LT + ++ + E ++A +G + VW+ E + +++ + + F P +
Sbjct: 59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS 118
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
++ +GS D + +++ +++H+ VRC+ P +L +++DD +KLW+
Sbjct: 119 FVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLT- 177
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
A F GH V + +P AS S T++ W L +E V C
Sbjct: 178 AGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRC 237
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
+ + D L G D L +++ ++ + C
Sbjct: 238 ILF--NPDGCCLYGGFQDSL-RVYGWEPERC 265
Score = 125 (49.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 36/147 (24%), Positives = 61/147 (41%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
I R L + D HP ++ + + + +W+ + ++ VR +F
Sbjct: 97 ILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFS 156
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTS-SDDMLIKL 125
P W+ + +DD V +++ + F H V V HP+ +LL S S M I+
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRF 216
Query: 126 WNWEKAWACQQVFEGHTHYVMQIVINP 152
W+ EK + E T V I+ NP
Sbjct: 217 WDLEKFHVVSCIEEEATP-VRCILFNP 242
WARNING: HSPs involving 879 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.447 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 229 229 0.00082 113 3 11 22 0.38 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1129
No. of states in DFA: 611 (65 KB)
Total size of DFA: 237 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.13u 0.07s 21.20t Elapsed: 00:00:14
Total cpu time: 21.28u 0.08s 21.36t Elapsed: 00:00:16
Start: Thu Aug 15 13:11:41 2013 End: Thu Aug 15 13:11:57 2013
WARNINGS ISSUED: 2