RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4653
(229 letters)
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 101 bits (251), Expect = 5e-26
Identities = 37/196 (18%), Positives = 67/196 (34%), Gaps = 2/196 (1%)
Query: 20 CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDM 79
C + ++ S + +W+ ET Q +F V + P V+G+ D
Sbjct: 147 SCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDA 206
Query: 80 QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFE 139
+++ +F H + + P T SDD +L++
Sbjct: 207 SAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH 266
Query: 140 GHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDK 199
+ + V K + D VW A L GH+ V+C+ D
Sbjct: 267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD--DG 324
Query: 200 PYLISGADDRLVKIWD 215
+ +G+ D +KIW+
Sbjct: 325 MAVATGSWDSFLKIWN 340
Score = 80.2 bits (196), Expect = 2e-18
Identities = 42/270 (15%), Positives = 87/270 (32%), Gaps = 47/270 (17%)
Query: 2 PLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVR 61
+++ +R L ++ ++++ +G + +W+ T V + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 62 AAKFVPRKNWIVTGSD-------------------------------------------- 77
+ P N++ G
Sbjct: 102 TCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSS 161
Query: 78 -DMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQ 136
D +++ T ++ +F H+ V +++ P ++ + D KLW+ + C+Q
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE-GMCRQ 220
Query: 137 VFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHG 196
F GH + I P + N FA+ S D T +++ L + T
Sbjct: 221 TFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS 279
Query: 197 GDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
L++G DD +WD L
Sbjct: 280 KSGRLLLAGYDDFNCNVWDALKADRAGVLA 309
Score = 76.3 bits (186), Expect = 5e-17
Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 2/122 (1%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDL--PVRAAKF 65
++ T + P + +++ +Q + ++ ++ + + F
Sbjct: 219 RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF 278
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
++ G DD V++ +R H + V C+ V + T S D +K+
Sbjct: 279 SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Query: 126 WN 127
WN
Sbjct: 339 WN 340
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 96.0 bits (237), Expect = 3e-24
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 24/216 (11%)
Query: 20 CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDM 79
+ P ++++ + + +W +T VK+F VR + I + S+D
Sbjct: 106 SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 165
Query: 80 QVCVFNYNTLERFHSFEAHSDYVRCVAVH--------------------PTQPFLLTSSD 119
V V+ T E H V C++ PFLL+ S
Sbjct: 166 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR 225
Query: 120 DMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF 179
D IK+W+ C GH ++V ++ + S + D+T++VW +
Sbjct: 226 DKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDYKNKRCMK 283
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
TL HE V +D++ PY+++G+ D+ VK+W+
Sbjct: 284 TLNAHEHFVTSLDFHK--TAPYVVTGSVDQTVKVWE 317
Score = 94.8 bits (234), Expect = 9e-24
Identities = 54/240 (22%), Positives = 106/240 (44%), Gaps = 22/240 (9%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
D +R L +D V+ + + + + + +W+ + + +++ D V +
Sbjct: 50 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSI 109
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+P + IV+ S D + ++ T +F H ++VR V + + + S+D +++
Sbjct: 110 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 169
Query: 126 WNWEKAWACQQVFEGHTHYVMQI-------------------VINPKDNNTFASASLDRT 166
W C+ H H V I + K S S D+T
Sbjct: 170 WVVAT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 228
Query: 167 VKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+K+W + + TL GH+ V V ++ GG +++S ADD+ +++WDY+NK C++TL
Sbjct: 229 IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRCMKTLN 286
Score = 92.5 bits (228), Expect = 6e-23
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 20/241 (8%)
Query: 4 RLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAA 63
R K L+ V HP M+++ + + VW++ET ++ + V+
Sbjct: 6 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI 65
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI 123
F + + S DM + ++++ E + H V V++ P ++++S D I
Sbjct: 66 SFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTI 125
Query: 124 KLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
K+W + C + F GH +V + N D AS S D+TV+VW + + L
Sbjct: 126 KMWEVQT-GYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELRE 183
Query: 184 HEKGVNCVDYYHGG------------------DKPYLISGADDRLVKIWDYQNKTCVQTL 225
H V C+ + P+L+SG+ D+ +K+WD C+ TL
Sbjct: 184 HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 243
Query: 226 E 226
Sbjct: 244 V 244
Score = 82.1 bits (201), Expect = 3e-19
Identities = 33/182 (18%), Positives = 71/182 (39%), Gaps = 22/182 (12%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
T + V+ + + + + V VW T + V + P
Sbjct: 138 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPES 197
Query: 70 NW--------------------IVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHP 109
++ +++GS D + +++ +T + H ++VR V H
Sbjct: 198 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 257
Query: 110 TQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKV 169
F+L+ +DD +++W+++ C + H H+V + + + S+D+TVKV
Sbjct: 258 GGKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKV 315
Query: 170 WQ 171
W+
Sbjct: 316 WE 317
Score = 77.5 bits (189), Expect = 2e-17
Identities = 24/121 (19%), Positives = 52/121 (42%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
+ + + + P++L+ + + +W+ T + + D VR F
Sbjct: 196 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 255
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+I++ +DD + V++Y + AH +V + H T P+++T S D +K+
Sbjct: 256 HSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 315
Query: 126 W 126
W
Sbjct: 316 W 316
Score = 51.3 bits (121), Expect = 2e-08
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
W + GH V +++ +P + SAS D T+KVW + TL+GH
Sbjct: 2 EWIPRPPEKYALSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTD 60
Query: 187 GVNCVDYYH 195
V + + H
Sbjct: 61 SVQDISFDH 69
Score = 46.7 bits (109), Expect = 8e-07
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 168 KVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLES 227
K W + + L GH V V ++ ++S ++D +K+WDY+ +TL+
Sbjct: 1 KEW-IPRPPEKYALSGHRSPVTRVIFHP--VFSVMVSASEDATIKVWDYETGDFERTLKG 57
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 91.8 bits (226), Expect = 2e-22
Identities = 50/220 (22%), Positives = 82/220 (37%), Gaps = 23/220 (10%)
Query: 20 CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDM 79
D P+ +++ + V +W+ T Q + + D A +I GS D
Sbjct: 168 SLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDR 227
Query: 80 QVCVFNYNTLERFH-------SFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA- 131
V V++ T S H D V V +++ S D +KLWN + A
Sbjct: 228 AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNAN 287
Query: 132 ----------WACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL 181
C+ + GH +V+ + ++ S S DR V W S +P L
Sbjct: 288 NKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLML 346
Query: 182 EGHEKGVNCVDYYHGG----DKPYLISGADDRLVKIWDYQ 217
+GH V V +G + +G+ D +IW Y+
Sbjct: 347 QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386
Score = 71.4 bits (173), Expect = 4e-15
Identities = 44/234 (18%), Positives = 91/234 (38%), Gaps = 21/234 (8%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
+ ++ P ++ + + +W+ E + V + + + + + P +
Sbjct: 117 SPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD 176
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+V+GS D V +++ T + + ++ S D +++W+ E
Sbjct: 177 KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 236
Query: 131 AWACQ------QVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF----- 179
+ + + GH V +V D + S SLDR+VK+W L +A+
Sbjct: 237 GFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 295
Query: 180 -------TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
T GH+ V V + Y++SG+ DR V WD ++ + L+
Sbjct: 296 NSGTCEVTYIGHKDFVLSVATTQNDE--YILSGSKDRGVLFWDKKSGNPLLMLQ 347
Score = 69.4 bits (168), Expect = 2e-14
Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 18/141 (12%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVK------------SFEV 55
T D V +++ + V +WN + N ++
Sbjct: 247 NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG 306
Query: 56 CDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAV------HP 109
V + +I++GS D V ++ + + H + V VAV P
Sbjct: 307 HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGP 366
Query: 110 TQPFLLTSSDDMLIKLWNWEK 130
T S D ++W ++K
Sbjct: 367 EYNVFATGSGDCKARIWKYKK 387
Score = 50.2 bits (118), Expect = 6e-08
Identities = 52/286 (18%), Positives = 87/286 (30%), Gaps = 73/286 (25%)
Query: 8 KRKLTARSDRVKCCDLHPTE-PWMLASLYNGHVHVWNHETNQNVKSFEVCDL----PVRA 62
+R ++ DL P L N + ++N + + L V
Sbjct: 8 QRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCC 67
Query: 63 AKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFE------------------AHSDYVRC 104
KF ++ TG + V+ + + Y+R
Sbjct: 68 VKFSNDGEYLATGCNK-TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRS 126
Query: 105 VAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHY-------------------- 144
V P FL T ++D LI++W+ E +
Sbjct: 127 VCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT 186
Query: 145 --------------------VMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE-- 182
V + ++P D A+ SLDR V+VW + L+
Sbjct: 187 VRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE 246
Query: 183 -----GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
GH+ V V + G ++SG+ DR VK+W+ QN
Sbjct: 247 NESGTGHKDSVYSVVFTRDGQ--SVVSGSLDRSVKLWNLQNANNKS 290
Score = 40.6 bits (93), Expect = 1e-04
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 6/81 (7%)
Query: 15 SDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRA------AKFVPR 68
D V + ++L+ + V W+ ++ + + V + + P
Sbjct: 308 KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPE 367
Query: 69 KNWIVTGSDDMQVCVFNYNTL 89
N TGS D + ++ Y +
Sbjct: 368 YNVFATGSGDCKARIWKYKKI 388
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 65.2 bits (157), Expect = 4e-13
Identities = 35/207 (16%), Positives = 76/207 (36%), Gaps = 16/207 (7%)
Query: 20 CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDM 79
+ +++ Y+ V VW+ ET + + + V + +F +V+GS D
Sbjct: 140 VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG--IHVVSGSLDT 197
Query: 80 QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFE 139
+ V++ T H+ H + + L++ + D +K+W+ + Q +
Sbjct: 198 SIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQG 255
Query: 140 GHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL-----EGHEKGVNCVDYY 194
+ H + + N ++S D TVK+W L + L G V +
Sbjct: 256 PNKH-QSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRAS 314
Query: 195 HGGDKPYLISGADD----RLVKIWDYQ 217
+ G+ + + + D+
Sbjct: 315 NTKL--VCAVGSRNGTEETKLLVLDFD 339
Score = 63.7 bits (153), Expect = 1e-12
Identities = 46/216 (21%), Positives = 81/216 (37%), Gaps = 14/216 (6%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
R L + V + + + +
Sbjct: 50 LRTLVGHTGGVWSSQMRDNIIIS----GSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL 105
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
+ +V+GS D + V++ T + H H VRCV +++ + D ++K+W+
Sbjct: 106 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWD 163
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
E C +GHT+ V D S SLD +++VW + + + TL GH+
Sbjct: 164 PET-ETCLHTLQGHTNRVYS---LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL 219
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
+ ++ L+SG D VKIWD + C+Q
Sbjct: 220 TSGMEL----KDNILVSGNADSTVKIWDIKTGQCLQ 251
Score = 62.9 bits (151), Expect = 2e-12
Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 9/208 (4%)
Query: 20 CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDM 79
+H E +++ + + VW+ ET Q + VR +V+G+ D
Sbjct: 100 VRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDF 157
Query: 80 QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFE 139
V V++ T H+ + H++ V + +++ S D I++W+ E C
Sbjct: 158 MVKVWDPETETCLHTLQGHTNRVYSLQFDGI--HVVSGSLDTSIRVWDVET-GNCIHTLT 214
Query: 140 GHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDK 199
GH + + N S + D TVK+W + + TL+G K + V +K
Sbjct: 215 GHQSLTSGMELKD---NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF-NK 270
Query: 200 PYLISGADDRLVKIWDYQNKTCVQTLES 227
++I+ +DD VK+WD + ++ L +
Sbjct: 271 NFVITSSDDGTVKLWDLKTGEFIRNLVT 298
Score = 61.0 bits (146), Expect = 1e-11
Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 13/221 (5%)
Query: 4 RLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAA 63
L + L D V C L +++ + + VW+ T + +++ V ++
Sbjct: 5 ELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 63
Query: 64 KFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI 123
+ N I++GS D + V+N T E H+ H+ VRC+ +H + + S D +
Sbjct: 64 QMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV--SGSRDATL 119
Query: 124 KLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEG 183
++W+ E Q +V + D S + D VKVW + + TL+G
Sbjct: 120 RVWDIE----TGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG 175
Query: 184 HEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
H Y D +++SG+ D +++WD + C+ T
Sbjct: 176 H----TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT 212
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 64.1 bits (154), Expect = 1e-12
Identities = 22/170 (12%), Positives = 56/170 (32%), Gaps = 4/170 (2%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNT--LERFHSFEAHSDYVRCVAVHPTQPFLLT 116
P+ + + I ++ +V ++ + + H + H+ V V P ++T
Sbjct: 9 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVT 68
Query: 117 SSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSAS 176
D +W + + + + V + FA S R + + +
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 128
Query: 177 PNFTLEGHEKGVNC--VDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ + +K + + + L +G+ D +I+ K +
Sbjct: 129 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEER 178
Score = 60.6 bits (145), Expect = 1e-11
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 4/131 (3%)
Query: 92 FHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE-KAWACQQVFEGHTHYVMQIVI 150
+HSF + + C A + + + ++ + ++ W + H V +
Sbjct: 2 YHSF--LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDW 59
Query: 151 NPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRL 210
P D+N + DR VW L + TL ++ G+ R+
Sbjct: 60 AP-DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV 118
Query: 211 VKIWDYQNKTC 221
+ I ++ +
Sbjct: 119 ISICYFEQEND 129
Score = 56.4 bits (134), Expect = 4e-10
Identities = 25/168 (14%), Positives = 53/168 (31%), Gaps = 6/168 (3%)
Query: 10 KLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRK 69
+ ++ V + ++ V + + + V + LP+ A F+
Sbjct: 196 ESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITES 255
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+ + G D +F Y++ SF D + + + D
Sbjct: 256 SLVAAGHDC-FPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSA 314
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNN---TFASASLDRTVKVWQLGS 174
A A + H + V QI + F + +D + +W + S
Sbjct: 315 AAGAG--LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360
Score = 52.2 bits (123), Expect = 1e-08
Identities = 29/197 (14%), Positives = 56/197 (28%), Gaps = 12/197 (6%)
Query: 35 YNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHS 94
+ + V F + + S D VC+ + + +
Sbjct: 179 PAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVAT 238
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKD 154
+ + + V + D L+ ++ A A + F G Q
Sbjct: 239 LASETLPLLAVTFITESSLVAAGHDCF-PVLFTYDSA-AGKLSFGGRLDVPKQSSQRG-L 295
Query: 155 NNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGG--DKPYLISGADDRLVK 212
+LD+ +A H+ V+ + GG + D +
Sbjct: 296 TARERFQNLDKKASSEGSAAAGAG-LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMS 354
Query: 213 IWDYQNKTCVQTLESGI 229
IWD V++LES +
Sbjct: 355 IWD------VRSLESAL 365
Score = 49.5 bits (116), Expect = 8e-08
Identities = 24/161 (14%), Positives = 50/161 (31%), Gaps = 6/161 (3%)
Query: 16 DRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQN--VKSFEVCDLPVRAAKFVPRKNWIV 73
+ + C + + N VH++ N+ V + + V + P N IV
Sbjct: 8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV 67
Query: 74 TGSDDMQVCVFNYNTL--ERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKA 131
T D V+ + + RCV P + S +I + +E+
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 127
Query: 132 WACQQVFEGHTHYVMQI--VINPKDNNTFASASLDRTVKVW 170
+ + ++ A+ S D +++
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIF 168
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 60.3 bits (144), Expect = 2e-11
Identities = 17/220 (7%), Positives = 44/220 (20%), Gaps = 21/220 (9%)
Query: 20 CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDM 79
P + +HV++ E + + A F + S
Sbjct: 142 IAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENS-HDYAPAFDADSKNLYYLSYRS 200
Query: 80 QVCVFNYNTLE-------RFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAW 132
+ L + + P D+
Sbjct: 201 LDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPIN 260
Query: 133 A------CQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
E V + A + + + + + +
Sbjct: 261 VDPGDYRMIIPLESSILIYSVPVHGE-FAAYYQGAPEKGVLLKYDVKTR----KVTEVKN 315
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ + ++ DD + + + +T+E
Sbjct: 316 NLTDLRLSADRK--TVMVRKDDGKIYTFPLEKPEDERTVE 353
Score = 43.7 bits (101), Expect = 8e-06
Identities = 28/227 (12%), Positives = 58/227 (25%), Gaps = 18/227 (7%)
Query: 16 DRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTG 75
+ + M L G V + F + D A P K+ G
Sbjct: 96 NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDG 155
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN------WE 129
+ V++ + F + + + A L S L +
Sbjct: 156 YVMQAIHVYDMEGRKIFAATT-ENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSF 214
Query: 130 KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ-------LGSASPNFTLE 182
+ + V + P + T + D + G LE
Sbjct: 215 EVVSKPFVIPLIPGSPNPTKLVP-RSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLE 273
Query: 183 GHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ HG Y + ++ +D + + V +++ +
Sbjct: 274 SSILIYSV--PVHGEFAAYYQGAPEKGVLLKYDVKTRK-VTEVKNNL 317
Score = 39.8 bits (91), Expect = 2e-04
Identities = 23/217 (10%), Positives = 51/217 (23%), Gaps = 14/217 (6%)
Query: 22 DLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQV 81
D P + ++A + G + + +K E L +R +
Sbjct: 9 DFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPE--PLRIRYVRRGGDTKVAFIHGTREGD 66
Query: 82 CVFNYNTL-ERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEG 140
+ Y+ + FE + V + V F + ++D I + E
Sbjct: 67 FLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR 126
Query: 141 --------HTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVD 192
+ I + + + + V+ + +
Sbjct: 127 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAF 186
Query: 193 YYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
L + L D + S
Sbjct: 187 DADS---KNLYYLSYRSLDPSPDRVVLNFSFEVVSKP 220
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 58.3 bits (139), Expect = 7e-11
Identities = 43/206 (20%), Positives = 75/206 (36%), Gaps = 20/206 (9%)
Query: 20 CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV-PRKNWIVTGSDD 78
L M+ + + VW+ + ++ V A V +IV+ S D
Sbjct: 98 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 157
Query: 79 MQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVF 138
+ V+N +T E + H + C+ +++ S D I+LW+ E C
Sbjct: 158 RTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIE----CGACL 211
Query: 139 EGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA---------SPNFTLEGHEKGVN 189
+ + DN S + D +KVW L +A TL H V
Sbjct: 212 RVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVF 271
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWD 215
+ + D+ ++S + D + IWD
Sbjct: 272 RLQF----DEFQIVSSSHDDTILIWD 293
Score = 57.6 bits (137), Expect = 1e-10
Identities = 40/217 (18%), Positives = 84/217 (38%), Gaps = 10/217 (4%)
Query: 9 RKLTARSDRVKC-CDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
+++ RS+ K L + +++ L + + +W+ T + + V ++
Sbjct: 6 QRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-- 63
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
+ V + V ++ + + ++T S D I +W+
Sbjct: 64 --DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 121
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
H V++ D+ SAS DRT+KVW + TL GH++G
Sbjct: 122 MASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 180
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQT 224
+ C+ Y ++SG+ D +++WD + C++
Sbjct: 181 IACLQY----RDRLVVSGSSDNTIRLWDIECGACLRV 213
Score = 44.5 bits (103), Expect = 4e-06
Identities = 34/222 (15%), Positives = 61/222 (27%), Gaps = 11/222 (4%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
KR LT + V C +S V N N +
Sbjct: 48 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM 107
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
S + + R + +++++S D IK+WN
Sbjct: 108 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV---DFDDKYIVSASGDRTIKVWN 164
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKG 187
+ GH + + S S D T+++W + +G
Sbjct: 165 TST-CEFVRTLNGHKRGIAC---LQYRDRLVVSGSSDNTIRLWDI----ECGACLRVLEG 216
Query: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ D ++SGA D +K+WD + +
Sbjct: 217 HEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL 258
Score = 41.0 bits (94), Expect = 5e-05
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 87 NTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVM 146
++L+R H S V C+ +++ D IK+W+ C+++ GHT V+
Sbjct: 3 HSLQRIHCRSETSKGVYCLQYDDQ--KIVSGLRDNTIKIWDKNT-LECKRILTGHTGSVL 59
Query: 147 QIVINP 152
+ +
Sbjct: 60 CLQYDE 65
Score = 40.2 bits (92), Expect = 1e-04
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
KGV C+ Y D ++SG D +KIWD C + L
Sbjct: 10 CRSETSKGVYCLQY----DDQKIVSGLRDNTIKIWDKNTLECKRILT 52
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 56.4 bits (134), Expect = 4e-10
Identities = 23/159 (14%), Positives = 49/159 (30%), Gaps = 1/159 (0%)
Query: 65 FVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIK 124
N+++TG+DD + V++ + H V + L++ S D ++
Sbjct: 19 LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVR 77
Query: 125 LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
+W+ +K ++ ++ K+ + S D T+ VW+L S
Sbjct: 78 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEE 137
Query: 185 EKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQ 223
+ V+ V
Sbjct: 138 HDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVS 176
Score = 51.8 bits (122), Expect = 1e-08
Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 4/133 (3%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
+ H V + +++T +DD +I++++ GH V +
Sbjct: 6 TTLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSIN-KKFLLQLSGHDGGVWALKYAH 63
Query: 153 KDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVK 212
S S DRTV+VW + EGH V C+D + Y+++G+ D +
Sbjct: 64 --GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 121
Query: 213 IWDYQNKTCVQTL 225
+W ++ V
Sbjct: 122 VWKLPKESSVPDH 134
Score = 46.0 bits (107), Expect = 1e-06
Identities = 12/165 (7%), Positives = 35/165 (21%), Gaps = 4/165 (2%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
K + + + + + +
Sbjct: 192 KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRL 251
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
++V+ + D + ++ N F H + + +L S + ++N
Sbjct: 252 SDKFLVSAAADGSIRGWDAND--YSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYN 309
Query: 128 WEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
+ + A+ D + L
Sbjct: 310 LRSGKLVHANILKDADQIWSVNFKG--KTLVAAVEKDGQSFLEIL 352
Score = 44.1 bits (102), Expect = 5e-06
Identities = 19/198 (9%), Positives = 58/198 (29%), Gaps = 10/198 (5%)
Query: 20 CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDM 79
+ +++ Y+ + VW+ + + + + + + ++ S D
Sbjct: 164 VRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDT 223
Query: 80 QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFE 139
+ +++ E ++ + H+ V + + A + F
Sbjct: 224 TIRIWDLENGELMYTLQGHTALVGLLRLSDKFLV-----SAAADGSIRGWDANDYSRKFS 278
Query: 140 GHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASP-NFTLEGHEKGVNCVDYYHGGD 198
H + I +N S S + ++ L S + + + V++
Sbjct: 279 YHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT- 336
Query: 199 KPYLISGADDRLVKIWDY 216
+ + D +
Sbjct: 337 --LVAAVEKDGQSFLEIL 352
Score = 41.4 bits (95), Expect = 5e-05
Identities = 16/111 (14%), Positives = 31/111 (27%), Gaps = 3/111 (2%)
Query: 20 CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDM 79
L L S + + K F N +V+GS++
Sbjct: 245 LVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSEN- 303
Query: 80 QVCVFNYNTLERFHS-FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
Q ++N + + H+ +D + V + D L +
Sbjct: 304 QFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVEKDGQSFLEILD 353
Score = 39.1 bits (89), Expect = 2e-04
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 179 FTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
TL GH V + Y+I+GADD++++++D NK + L
Sbjct: 6 TTLRGHMTSVITCLQFEDN---YVITGADDKMIRVYDSINKKFLLQLS 50
Score = 38.7 bits (88), Expect = 3e-04
Identities = 21/211 (9%), Positives = 63/211 (29%), Gaps = 8/211 (3%)
Query: 18 VKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSD 77
+ L + + V++ + N +V+GS
Sbjct: 120 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSY 179
Query: 78 DMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQV 137
D + V++ ++ + H+D + + +++S D I++W+ E +
Sbjct: 180 DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL 239
Query: 138 FEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGG 197
+ + + + A S+ + H ++ + ++
Sbjct: 240 QGHTALVGLLRLSDKFLVSAAADGSIRGWDANDY------SRKFSYHHTNLSAITTFYVS 293
Query: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
D ++ + I++ ++ V
Sbjct: 294 DN--ILVSGSENQFNIYNLRSGKLVHANILK 322
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 56.0 bits (133), Expect = 6e-10
Identities = 16/160 (10%), Positives = 44/160 (27%), Gaps = 26/160 (16%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNW---EKAWACQQVFEGHTH------ 143
++ +AH + V+ F ++ S D +K+W+ + + + H
Sbjct: 8 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHH 65
Query: 144 --YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGG---- 197
+ I + + A+ S + +++ + + + D
Sbjct: 66 VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWAL 125
Query: 198 ---------DKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
L++ IW + +
Sbjct: 126 KWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL 165
Score = 52.2 bits (123), Expect = 1e-08
Identities = 12/104 (11%), Positives = 30/104 (28%), Gaps = 14/104 (13%)
Query: 133 ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE------GHEK 186
A + H + + + S S D +KVW + H+
Sbjct: 5 ATANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKS 61
Query: 187 GVNCVDYY-----HGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
G++ VD + + + + + + + + +
Sbjct: 62 GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKV 105
Score = 51.0 bits (120), Expect = 3e-08
Identities = 28/278 (10%), Positives = 67/278 (24%), Gaps = 57/278 (20%)
Query: 3 LRLDIKRKLTARSDRVKCCDLHPTEPWMLASL-YNGHVHVWNHETNQNVKSFEVCDLPVR 61
+ + D ++ + E ++A+ ++G + + K L +
Sbjct: 54 YSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLL 113
Query: 62 AAKFVPRKNW---------------IVTGSDDMQVCVFNYNTLER--------------- 91
+ W +V ++ ++
Sbjct: 114 DSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLEL 173
Query: 92 ---FHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQI 148
S S + V + + T ++ +++ H+
Sbjct: 174 QGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSN 232
Query: 149 VINPKDNN----TFASASLDRTVKVWQ----------------LGSASPNFTLEGHEKGV 188
I + A A + S+ + H V
Sbjct: 233 SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWV 292
Query: 189 NCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ + G+ L S D ++ WD + K + TL
Sbjct: 293 MSLSFNDSGE--TLCSAGWDGKLRFWDVKTKERITTLN 328
Score = 47.9 bits (112), Expect = 3e-07
Identities = 18/148 (12%), Positives = 42/148 (28%), Gaps = 21/148 (14%)
Query: 28 PWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYN 87
+ ++Q V + F + + D ++ ++
Sbjct: 260 LYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK 319
Query: 88 TLERFHSFEAHSDYVRC----VAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
T ER + H D + +AV L + + +K W
Sbjct: 320 TKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG---VFDVKFLKKGW----------- 365
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQ 171
+ + N + LDR+++ ++
Sbjct: 366 ---RSGMGADLNESLCCVCLDRSIRWFR 390
Score = 46.4 bits (108), Expect = 1e-06
Identities = 29/175 (16%), Positives = 51/175 (29%), Gaps = 23/175 (13%)
Query: 38 HVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFH---- 93
E V+S + + I TG ++ V + +TL +
Sbjct: 165 LNWSPTLELQGTVESPMTPSQFATSVDISE-RGLIATGFNNGTVQISELSTLRPLYNFES 223
Query: 94 --SFEAHSDYVRCVAVHPTQPFLLTSSDD---------------MLIKLWNWEKAWACQQ 136
S +S+ +R V P L + D + L +
Sbjct: 224 QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASL 283
Query: 137 VFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
H+ +VM + N T SA D ++ W + + TL H +
Sbjct: 284 GEFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIE 337
Score = 45.2 bits (105), Expect = 2e-06
Identities = 19/170 (11%), Positives = 47/170 (27%), Gaps = 17/170 (10%)
Query: 38 HVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNY----------- 86
+ ++ S +R+ KF P+ + + D
Sbjct: 212 LSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGS 271
Query: 87 -----NTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGH 141
++ + AHS +V ++ + + L ++ D ++ W+ + H
Sbjct: 272 LSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT-KERITTLNMH 330
Query: 142 THYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+ + S + V L + + + CV
Sbjct: 331 CDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCV 380
Score = 43.7 bits (101), Expect = 8e-06
Identities = 20/207 (9%), Positives = 57/207 (27%), Gaps = 49/207 (23%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFE------AHSDYVRCVAV----- 107
+ + ++ V+ S D + V++ L+ + + H + V V
Sbjct: 16 DIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIE 73
Query: 108 --HPTQPFLLTSSDDMLIKLWNWEKAWACQQVF---------EGHTHYVMQIVINPKDN- 155
+ T+S + + + ++V + H + ++
Sbjct: 74 RDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR 133
Query: 156 ---NTFASASLDRTVKVWQLGSASPN------------------FTLEGHEKGVNCVDYY 194
+ + + T +W+ + + + VD
Sbjct: 134 LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDIS 193
Query: 195 HGGDKPYLISGADDRLVKIWDYQNKTC 221
G + +G ++ V+I +
Sbjct: 194 ERG---LIATGFNNGTVQISELSTLRP 217
Score = 36.8 bits (83), Expect = 0.002
Identities = 7/50 (14%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESGI 229
+ H+ + V + +S + D +K+WD + +
Sbjct: 9 AGKAHDADIFSVSA----CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSY 54
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 55.6 bits (132), Expect = 7e-10
Identities = 25/196 (12%), Positives = 58/196 (29%), Gaps = 7/196 (3%)
Query: 20 CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDM 79
+ P + +G++ VW+ V+ F+ + TG D
Sbjct: 146 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDN 205
Query: 80 QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFE 139
V ++ + + + + + PT + + + +
Sbjct: 206 TVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEW--LAVGMESSNVEVLHVNKPDKYQLH 262
Query: 140 GHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDK 199
H V+ + F S D + W+ + F V D D
Sbjct: 263 LHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISV--DD 318
Query: 200 PYLISGADDRLVKIWD 215
Y+++G+ D+ +++
Sbjct: 319 KYIVTGSGDKKATVYE 334
Score = 53.7 bits (127), Expect = 3e-09
Identities = 20/153 (13%), Positives = 46/153 (30%), Gaps = 4/153 (2%)
Query: 20 CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDM 79
C + L + + + + + P W+ G +
Sbjct: 187 SCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESS 246
Query: 80 QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFE 139
V V + N + H V + + +++ D L+ W + Q
Sbjct: 247 NVEVLHVNK-PDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-- 303
Query: 140 GHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
+ V+ I+ D+ + S D+ V+++
Sbjct: 304 KESSSVLSCDISV-DDKYIVTGSGDKKATVYEV 335
Score = 53.3 bits (126), Expect = 5e-09
Identities = 16/112 (14%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
Query: 16 DRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTG 75
++ PT W+ + + +V H + + + V + KF W V+
Sbjct: 225 SQIFSLGYCPTGEWLAVGMESSNVE-VLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVST 283
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWN 127
D + + + S V + +++T S D ++
Sbjct: 284 GKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Score = 46.0 bits (107), Expect = 1e-06
Identities = 21/216 (9%), Positives = 57/216 (26%), Gaps = 4/216 (1%)
Query: 11 LTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKN 70
R + ++ C L P ++ + +W+ E+ +
Sbjct: 93 CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD 152
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
V S + ++ + + + + + + + +W+
Sbjct: 153 SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNC 190
Q T + + P + + + + L HE V
Sbjct: 213 REGRQLQQHDFTSQIFSLGYCPTGEWLAVGM--ESSNVEVLHVNKPDKYQLHLHESCVLS 270
Query: 191 VDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ + + G + +S D L+ W + +
Sbjct: 271 LKFAYCGK--WFVSTGKDNLLNAWRTPYGASIFQSK 304
Score = 40.9 bits (94), Expect = 6e-05
Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 16/118 (13%)
Query: 67 PRKNWIVTGSDDMQVCVFNYNTL---------ERFHSFEAHSDYVRCVAVHPTQPFLLTS 117
P ++ VT MQ F + L + ++ H + V V + + T
Sbjct: 11 PAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLN-HGEVVCAVTISNPTRHVYTG 69
Query: 118 SDDMLIKLWNWEKAWA----CQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
+K+W+ Q +Y+ + P D T T+ +W
Sbjct: 70 GKGC-VKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWD 125
Score = 37.9 bits (86), Expect = 7e-04
Identities = 9/93 (9%), Positives = 22/93 (23%), Gaps = 4/93 (4%)
Query: 59 PVRAAKFVPRKNWIVTGSDDM----QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFL 114
V A + TG + + +Y+R + P L
Sbjct: 53 VVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTL 112
Query: 115 LTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQ 147
+ + + +W+ + +
Sbjct: 113 IVGGEASTLSIWDLAAPTPRIKAELTSSAPACY 145
Score = 29.0 bits (63), Expect = 0.47
Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 4/66 (6%)
Query: 160 SASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK 219
D + A TL H + V V + ++ +G VK+WD +
Sbjct: 27 PFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTR--HVYTGGKGC-VKVWDISHP 82
Query: 220 TCVQTL 225
+
Sbjct: 83 GNKSPV 88
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 54.2 bits (128), Expect = 2e-09
Identities = 22/225 (9%), Positives = 62/225 (27%), Gaps = 11/225 (4%)
Query: 1 MPLRLDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGH--VHVWNHETNQNVKSFEVCDL 58
+ +++K + + + + + ++ ++
Sbjct: 101 NSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQ 160
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVC----VFNYNTLERFHSFEAHSDYVRCVAVHPTQPFL 114
+ A + D + + +VR V P
Sbjct: 161 RINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEF 220
Query: 115 LTSSDDMLIK--LWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
+ + + + ++ D+ FA+ D T++VW +
Sbjct: 221 VITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDV 280
Query: 173 GSASP--NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
++ +TL+ + G V G+ +IS + D + ++
Sbjct: 281 TTSKCVQKWTLDKQQLGNQQVGVVATGNG-RIISLSLDGTLNFYE 324
Score = 44.9 bits (104), Expect = 2e-06
Identities = 18/155 (11%), Positives = 36/155 (23%), Gaps = 3/155 (1%)
Query: 20 CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDM 79
Y G ++ + K + + +
Sbjct: 172 PMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKIS 231
Query: 80 QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFE 139
+ L+ + T D I++W+ C Q +
Sbjct: 232 CFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTT-SKCVQKWT 290
Query: 140 GHTH--YVMQIVINPKDNNTFASASLDRTVKVWQL 172
Q+ + N S SLD T+ ++L
Sbjct: 291 LDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 35.7 bits (80), Expect = 0.003
Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 16/229 (6%)
Query: 14 RSDRVKCCDLHPTEP--WMLASLYNGHVHVWNHETNQNVKSFEVCDL--------PVRAA 63
S V P + ++ + +G V VW ++ S EV P+
Sbjct: 62 GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 121
Query: 64 KFVP--RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
+ R+ +V D ++++ HS + + ++P + D
Sbjct: 122 SWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD 181
Query: 122 LIKLWNW---EKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
++ K A + +V + +P + DR + + S
Sbjct: 182 GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL 241
Query: 179 FTLEGHEKGVNCVDYY-HGGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
+E ++ V + D + D +++WD CVQ
Sbjct: 242 KYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWT 290
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 53.3 bits (127), Expect = 6e-09
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 15/174 (8%)
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
+ VT D Q+ + + +T E + V + + +L D + +
Sbjct: 30 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA-VHISRLSASGRYLFVIGRDGKVNMI 88
Query: 127 NWE----KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE 182
+ A ++ + +D A A + + P
Sbjct: 89 DLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 148
Query: 183 GHEKGVNCVDYYHGG---------DKPYLI-SGADDRLVKIWDYQNKTCVQTLE 226
+ +Y+ +P I + + + + DY + ++T E
Sbjct: 149 TRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE 202
Score = 42.1 bits (98), Expect = 2e-05
Identities = 11/141 (7%), Positives = 35/141 (24%), Gaps = 8/141 (5%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF 95
G + + + T + + ++ ++ D +V + + E
Sbjct: 41 AGQIALIDGSTYEIKTVLDTGYAV-HISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA 99
Query: 96 E-----AHSDYVRCVAVHPTQPFLL-TSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIV 149
E + + + + + E +++ +
Sbjct: 100 EIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET-LEPKKIQSTRGMTYDEQE 158
Query: 150 INPKDNNTFASASLDRTVKVW 170
+P+ AS R +
Sbjct: 159 YHPEPRVAAILASHYRPEFIV 179
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 52.5 bits (124), Expect = 9e-09
Identities = 9/79 (11%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Query: 95 FEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQV--FEGHTHYVMQIVINP 152
+A DY+ + + P++ LL +S D + ++ ++ + + H ++
Sbjct: 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID 66
Query: 153 KDNNTFASASLDRTVKVWQ 171
+ ++ +
Sbjct: 67 NTDLQIYVGTVQGEILKVD 85
Score = 47.5 bits (111), Expect = 3e-07
Identities = 25/192 (13%), Positives = 54/192 (28%), Gaps = 26/192 (13%)
Query: 20 CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCD----LPVRAAKFVPRKNWIVTG 75
+ ++ + N V + ++ A +
Sbjct: 153 IFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS 212
Query: 76 SDDMQVCVFNYNTLER---------------FHSFEAHSDYVRCVAVHPTQPFLLTSSDD 120
S D +V V ++ + V + P FL T+ D
Sbjct: 213 SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD 272
Query: 121 MLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFT 180
+I WN + + + + V++I +N A+ D T K + + T
Sbjct: 273 GIISCWNLQTRKKIKNFAKFNEDSVVKIAC---SDNILCLATSDDTFKTNA----AIDQT 325
Query: 181 LEGHEKGVNCVD 192
+E + + +
Sbjct: 326 IELNASSIYIIF 337
Score = 45.2 bits (105), Expect = 2e-06
Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 5/89 (5%)
Query: 136 QVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLE---GHEKGVNCVD 192
Q+ + Y+ I I P + S D ++ V++ + N L ++ + C +
Sbjct: 5 QIEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63
Query: 193 YYHGGDKPYLISGADDRLVKIWDYQNKTC 221
+ D + G + D
Sbjct: 64 FIDNTDL-QIYVGTVQGEILKVDLIGSPS 91
Score = 44.8 bits (104), Expect = 3e-06
Identities = 18/235 (7%), Positives = 67/235 (28%), Gaps = 11/235 (4%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQN---VKSFEVCDLPVR 61
+ I + A D + + P++ +L + ++G + V+ + + P+
Sbjct: 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL 60
Query: 62 AAKFVPR-KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDD 120
F+ I G+ ++ + F + + + + L ++
Sbjct: 61 CCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASW 120
Query: 121 MLIKLWNWEKAWACQQVFEGHTH-----YVMQIVINPKDNNTFASASLDRTVKVWQLGSA 175
+ + + + + + +I +++ + V+ ++L
Sbjct: 121 DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLC 180
Query: 176 SPNFTLEGHEKGVNCVDYY--HGGDKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
+ + ++ + D V + + ++
Sbjct: 181 EDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235
Score = 42.1 bits (97), Expect = 2e-05
Identities = 17/239 (7%), Positives = 59/239 (24%), Gaps = 27/239 (11%)
Query: 15 SDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVT 74
+ CC+ + + + + +
Sbjct: 56 KHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKL 115
Query: 75 GSDDMQVCVFNYN--------TLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
+ + + + + + + L+ ++ ++ +
Sbjct: 116 IAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWF 175
Query: 127 NWE--KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL--- 181
+ G + + + + PK+ +A +S+D V V ++
Sbjct: 176 RLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235
Query: 182 ------------EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
VN +++ +L + D ++ W+ Q + ++
Sbjct: 236 FAFRCHRLNLKDTNLAYPVNSIEFSP--RHKFLYTAGSDGIISCWNLQTRKKIKNFAKF 292
Score = 32.9 bits (73), Expect = 0.023
Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 8 KRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVP 67
K T + V + P ++ + +G + WN +T + +K+F + K
Sbjct: 244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN-EDSVVKIAC 302
Query: 68 RKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYV 102
N + + D + E ++ +
Sbjct: 303 SDNILCLATSDDTFKTNAAID----QTIELNASSI 333
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 50.8 bits (120), Expect = 3e-08
Identities = 18/232 (7%), Positives = 45/232 (19%), Gaps = 43/232 (18%)
Query: 37 GHVHVWNHETNQNVKSFEVCDLPVRAAKFVP------RKNWIVTGSDDMQVCVFNYNTLE 90
V + ++ T + + + + + V + +
Sbjct: 48 DVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVS 107
Query: 91 RFHSFEAHSDYVRCVAVHPTQPFLLT--SSDDMLIKLWNWEKAWACQQVFEGHTHYVMQI 148
+ E D CV +P T + + ++ V +
Sbjct: 108 KKMLSE--IDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKD 165
Query: 149 VINPKDN---NTFASASLDRTVKVWQLGSASPNF--TLEGHEKGVNCVDYYHGGDKPY-- 201
+ + + V+ P F + GG +
Sbjct: 166 PAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAV 225
Query: 202 --------------------------LISGADDRLVKIWDYQNKTCVQTLES 227
+ + + V+ L S
Sbjct: 226 QAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQRVARWDLAQQKVEPLVS 277
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 50.3 bits (119), Expect = 5e-08
Identities = 21/164 (12%), Positives = 47/164 (28%), Gaps = 6/164 (3%)
Query: 57 DLPVRAAKFVPRKNWI-VTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLL 115
D P + + N VT D Q+ + + ++ + + V + + +LL
Sbjct: 19 DRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLL 77
Query: 116 TSSDDMLIKLWNWEKAW----ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQ 171
D I + + A ++ +D T A A +
Sbjct: 78 VIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMD 137
Query: 172 LGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWD 215
+ P + V+ Y+ +I+ + +
Sbjct: 138 GETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 181
Score = 44.2 bits (103), Expect = 5e-06
Identities = 10/140 (7%), Positives = 36/140 (25%), Gaps = 6/140 (4%)
Query: 36 NGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLE----- 90
G + + + ++ + VK + ++ +++ D ++ + + E
Sbjct: 41 AGQIALVDGDSKKIVKVIDTGYAV-HISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA 99
Query: 91 RFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVI 150
+ + + + +Q+ V
Sbjct: 100 EIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTY 159
Query: 151 NPKDNNTFASASLDRTVKVW 170
+P+ AS + +
Sbjct: 160 HPEPRVAAIIASHEHPEFIV 179
Score = 33.8 bits (76), Expect = 0.013
Identities = 28/223 (12%), Positives = 64/223 (28%), Gaps = 31/223 (13%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVK--SFEVCDLPVRAAKFVPRKNWIVTGSDDMQV 81
H +++ G V + N++ N+ S + ++ ++ +V
Sbjct: 172 HEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKV 231
Query: 82 CVFNYNTLERFHSFEAHSDYVRCVAVHPTQP-----FLLTSSDDMLIKLWN------WEK 130
V + + + P + + D I L +
Sbjct: 232 AVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQY 291
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASL------DRTVKVWQLGSASPNFT---- 180
AW +G + I +PK ++ + + ++V V+ L + +
Sbjct: 292 AWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPI 351
Query: 181 -----LEGHEKGVNCVDYYHGGDKPYLISGADDRL---VKIWD 215
L K V +Y GD+ + + + D
Sbjct: 352 AEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVD 394
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 49.6 bits (116), Expect = 7e-08
Identities = 22/206 (10%), Positives = 51/206 (24%), Gaps = 13/206 (6%)
Query: 20 CCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDM 79
A L N + ++ + P A + +
Sbjct: 83 PKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNT 142
Query: 80 QVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLI---------KLWNWEK 130
+ F +++ P++ ++ I +
Sbjct: 143 IQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWA 202
Query: 131 AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNF-TLEGHEKGVN 189
+ + + A+ SLD + ++ + L H+ GVN
Sbjct: 203 FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVN 262
Query: 190 CVDYYHGGDKPYLISGADDRLVKIWD 215
+ + L+S D +K W+
Sbjct: 263 NLLWETPS---TLVSSGADACIKRWN 285
Score = 37.2 bits (84), Expect = 8e-04
Identities = 9/62 (14%), Positives = 25/62 (40%), Gaps = 10/62 (16%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
+ H+ + + V+P L++ S D I W+ + + H++ ++ + +
Sbjct: 7 KTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS------MHQDHSNLIVSLDNSK 56
Query: 153 KD 154
Sbjct: 57 AQ 58
Score = 36.5 bits (82), Expect = 0.002
Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 10/62 (16%)
Query: 136 QVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYH 195
+ GH + + +NP S S D + W S + H + +D
Sbjct: 7 KTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSS-----MHQDHSNLIVSLDNSK 56
Query: 196 GG 197
Sbjct: 57 AQ 58
Score = 32.2 bits (71), Expect = 0.042
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 6/49 (12%)
Query: 173 GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
G T+ GH KG+ + LISG+ D + W +
Sbjct: 1 GHDEVLKTISGHNKGITALTVN------PLISGSYDGRIMEWSSSSMHQ 43
Score = 31.1 bits (68), Expect = 0.090
Identities = 20/137 (14%), Positives = 46/137 (33%), Gaps = 9/137 (6%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSS 118
+ A P +++GS D ++ ++ ++ + HS+ + + Q + S
Sbjct: 15 GITALTVNP----LISGSYDGRIMEWSSSS-----MHQDHSNLIVSLDNSKAQEYSSISW 65
Query: 119 DDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPN 178
DD L + + Q + V+ D+ + +K +L S
Sbjct: 66 DDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSA 125
Query: 179 FTLEGHEKGVNCVDYYH 195
+L + V +
Sbjct: 126 VSLSQNYVAVGLEEGNT 142
Score = 27.6 bits (59), Expect = 1.2
Identities = 14/222 (6%), Positives = 47/222 (21%), Gaps = 4/222 (1%)
Query: 6 DIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKF 65
S+ + D + + S + + +
Sbjct: 37 SSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAV 96
Query: 66 VPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKL 125
+ + ++ + + + +YV + SD +
Sbjct: 97 LTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFD 156
Query: 126 WNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHE 185
+ + + + S + W +
Sbjct: 157 LKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWA---FRTSKINAISW 213
Query: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN-KTCVQTLE 226
K ++ + +G+ D + I+ + ++ L
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN 255
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 47.8 bits (112), Expect = 3e-07
Identities = 19/211 (9%), Positives = 44/211 (20%), Gaps = 5/211 (2%)
Query: 16 DRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTG 75
+ D +P + + + + +
Sbjct: 125 EVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNW 184
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQ 135
+ S + T+ + +
Sbjct: 185 NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHT 244
Query: 136 QVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYH 195
Q F T + +PKD N + + L + CV +
Sbjct: 245 QEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDK 301
Query: 196 GGDKPYLISGADDRLVKIWDYQNKTCVQTLE 226
GD L G + +++ V+ ++
Sbjct: 302 KGD--KLYLGGTFNDLAVFNPDTLEKVKNIK 330
Score = 38.6 bits (88), Expect = 3e-04
Identities = 10/148 (6%), Positives = 34/148 (22%), Gaps = 5/148 (3%)
Query: 38 HVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLE-RFHSFE 96
+ + + A+F K T + T + F
Sbjct: 189 YSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA 248
Query: 97 AHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNN 156
++ P P + + + ++ ++ + H + + +
Sbjct: 249 DLTELYFTGLRSPKDPNQIYGVLNR-LAKYDLKQ-RKLIKAAN-LDHTYYCVAFDK-KGD 304
Query: 157 TFASASLDRTVKVWQLGSASPNFTLEGH 184
+ V+ + ++
Sbjct: 305 KLYLGGTFNDLAVFNPDTLEKVKNIKLP 332
Score = 36.3 bits (82), Expect = 0.002
Identities = 8/140 (5%), Positives = 37/140 (26%), Gaps = 16/140 (11%)
Query: 105 VAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLD 164
A+ +++ ++ + + + + ++ P + + +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 165 RTVKVWQL------GSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRL-------- 210
+ L A+ + + + G + Y RL
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121
Query: 211 --VKIWDYQNKTCVQTLESG 228
++++ + + + +
Sbjct: 122 PRLEVFSTADGLEAKPVRTF 141
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 47.2 bits (110), Expect = 5e-07
Identities = 19/192 (9%), Positives = 44/192 (22%), Gaps = 1/192 (0%)
Query: 24 HPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCV 83
E ++ + F +
Sbjct: 119 AVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP 178
Query: 84 FNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTH 143
F + + H+ HS + + +
Sbjct: 179 FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS 238
Query: 144 YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
+ + D ASAS D+T+K+W + + T+ + + K L+
Sbjct: 239 GSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII-WTKQALV 297
Query: 204 SGADDRLVKIWD 215
S + + + +
Sbjct: 298 SISANGFINFVN 309
Score = 44.9 bits (104), Expect = 3e-06
Identities = 29/232 (12%), Positives = 59/232 (25%), Gaps = 8/232 (3%)
Query: 5 LDIKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEV---CDLPVR 61
L T S + P+ + + +G+V +W+ ++ +
Sbjct: 48 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKD 107
Query: 62 AAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDM 121
+ K G + + S
Sbjct: 108 ISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSD 167
Query: 122 LIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL 181
+ +E + G + V D + FAS D T+ ++ +
Sbjct: 168 DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 227
Query: 182 EGHEKGVNCVDYYHGG-----DKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
E G D + S + D+ +KIW+ +T+ G
Sbjct: 228 EDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG 279
Score = 39.1 bits (89), Expect = 2e-04
Identities = 10/95 (10%), Positives = 25/95 (26%), Gaps = 2/95 (2%)
Query: 65 FVPRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIK 124
P + I + V +L + HS P+ + + ++
Sbjct: 25 NTPAGDKIQYCNGT-SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVR 83
Query: 125 LWNWE-KAWACQQVFEGHTHYVMQIVINPKDNNTF 158
+W+ + + V I + +
Sbjct: 84 IWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIA 118
Score = 37.6 bits (85), Expect = 8e-04
Identities = 12/68 (17%), Positives = 18/68 (26%), Gaps = 3/68 (4%)
Query: 154 DNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
+ + +V +GS + H Y SG V+I
Sbjct: 28 AGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSP--SGYYCASGDVHGNVRI 84
Query: 214 WDYQNKTC 221
WD T
Sbjct: 85 WDTTQTTH 92
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 44.6 bits (103), Expect = 4e-06
Identities = 14/94 (14%), Positives = 29/94 (30%), Gaps = 2/94 (2%)
Query: 133 ACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL-EGHEKGVNCV 191
+ QV GH + + + D T SA + + W + + N + H + +
Sbjct: 3 SIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 192 DYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
GD + ++V +
Sbjct: 62 KTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVA 95
Score = 44.6 bits (103), Expect = 4e-06
Identities = 23/200 (11%), Positives = 58/200 (29%), Gaps = 3/200 (1%)
Query: 16 DRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTG 75
+ + +A+ Y + + + S+ A + +
Sbjct: 100 SQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSS---CVALSNDKQFVAVGGQ 156
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQ 135
+ V + ++ + ++ + + T +I
Sbjct: 157 DSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAH 216
Query: 136 QVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYH 195
+ V DN A+ SLD +V VW + S + + ++ V+
Sbjct: 217 TNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVI 276
Query: 196 GGDKPYLISGADDRLVKIWD 215
++ ++S D +K W+
Sbjct: 277 WLNETTIVSAGQDSNIKFWN 296
Score = 41.1 bits (94), Expect = 4e-05
Identities = 8/68 (11%), Positives = 21/68 (30%)
Query: 93 HSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINP 152
H+ + ++ L ++ + I W+ + + + H + I
Sbjct: 6 QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTS 65
Query: 153 KDNNTFAS 160
K + S
Sbjct: 66 KGDLFTVS 73
Score = 39.6 bits (90), Expect = 1e-04
Identities = 32/163 (19%), Positives = 53/163 (32%), Gaps = 6/163 (3%)
Query: 15 SDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCD----LPVRAAKFVPRKN 70
S C L + ++ + VHV+ + + V +
Sbjct: 136 SYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLV 195
Query: 71 WIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEK 130
+ V N L +S+ H+ V CV+ P L T S D + +WN K
Sbjct: 196 ATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK 255
Query: 131 -AWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQL 172
+ + H + VI + T SA D +K W +
Sbjct: 256 PSDHPIIIKGAHAMSSVNSVIWL-NETTIVSAGQDSNIKFWNV 297
Score = 38.8 bits (88), Expect = 3e-04
Identities = 8/49 (16%), Positives = 13/49 (26%), Gaps = 2/49 (4%)
Query: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
GH K + + G L S + + WD +
Sbjct: 7 VRYGHNKAITALSSSADGK--TLFSADAEGHINSWDISTGISNRVFPDV 53
Score = 38.0 bits (86), Expect = 5e-04
Identities = 8/89 (8%), Positives = 22/89 (24%), Gaps = 1/89 (1%)
Query: 59 PVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLERFHSF-EAHSDYVRCVAVHPTQPFLLTS 117
+ A + + + + ++ +T F + H+ + + S
Sbjct: 14 AITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVS 73
Query: 118 SDDMLIKLWNWEKAWACQQVFEGHTHYVM 146
DD L + +
Sbjct: 74 WDDHLKVVPAGGSGVDSSKAVANKLSSQP 102
Score = 32.6 bits (72), Expect = 0.034
Identities = 19/219 (8%), Positives = 52/219 (23%), Gaps = 3/219 (1%)
Query: 7 IKRKLTARSDRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFV 66
+ + + S + V + + L +
Sbjct: 47 NRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLA 106
Query: 67 PRKNWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLW 126
+ + + + + + S CVA+ + F+ D + ++
Sbjct: 107 VSADGDIAVAACYKHIAIYSH---GKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVY 163
Query: 127 NWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEK 186
A + H + + + A+ + + + T
Sbjct: 164 KLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFH 223
Query: 187 GVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTL 225
D L +G+ D V +W+ + +
Sbjct: 224 TAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPII 262
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 44.4 bits (103), Expect = 4e-06
Identities = 13/205 (6%), Positives = 39/205 (19%), Gaps = 7/205 (3%)
Query: 22 DLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQV 81
D + + DL V + S + +
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLG-RDLHVMDPEAGTLVEDKPIQSWEAET 179
Query: 82 CVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGH 141
+ ++ + + E +
Sbjct: 180 YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239
Query: 142 THYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPY 201
+ +NP + ++ + L + + V+ G
Sbjct: 240 DVFYFSTAVNPAKT---RAFGAYNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGS--T 293
Query: 202 LISGADDRLVKIWDYQNKTCVQTLE 226
+ G + +D + ++
Sbjct: 294 VWLGGALGDLAAYDAETLEKKGQVD 318
Score = 34.8 bits (78), Expect = 0.007
Identities = 14/160 (8%), Positives = 34/160 (21%), Gaps = 8/160 (5%)
Query: 69 KNWIVTGSDDMQVCVFNYNTLERFHSFEAHSD--YVRCVAVHPTQPFLL-TSSDDMLIKL 125
+++I+ + ++ V + + V P T + +
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 126 WNWE----KAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTL 181
+ E + ++P D T A +++ L
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVAL 119
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTC 221
E + L D +
Sbjct: 120 YDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVM 159
Score = 33.2 bits (74), Expect = 0.018
Identities = 8/153 (5%), Positives = 33/153 (21%), Gaps = 6/153 (3%)
Query: 40 HVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLE-RFHSFEAH 98
+ + + + + + + T E
Sbjct: 180 YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239
Query: 99 SDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTF 158
+ AV+P + + + + ++ H + ++ D +T
Sbjct: 240 DVFYFSTAVNPAKTRAFGAYNVLES----FDLEKNASIKRVPLPHSYYSVNVST-DGSTV 294
Query: 159 ASASLDRTVKVWQLGSASPNFTLEGHEKGVNCV 191
+ + + ++ +
Sbjct: 295 WLGGALGDLAAYDAETLEKKGQVDLPGNASMSL 327
Score = 26.7 bits (57), Expect = 2.3
Identities = 3/28 (10%), Positives = 12/28 (42%)
Query: 199 KPYLISGADDRLVKIWDYQNKTCVQTLE 226
+ Y+++ A + + D + + +
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVIT 28
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 42.9 bits (99), Expect = 1e-05
Identities = 19/193 (9%), Positives = 50/193 (25%), Gaps = 30/193 (15%)
Query: 28 PWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNY- 86
+A G + + E + + + + +V + ++ +
Sbjct: 170 LAKVAFGTEGTPEITHTEVFH-----PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLS 224
Query: 87 -NTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDD------------------MLIKLWN 127
+ + EA ++ R P + +
Sbjct: 225 SGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 284
Query: 128 WEKA-WACQQVFEGHTHYVMQIVINPKDNNT--FASASLDRTVKVWQLGSASPNFTLEGH 184
+ FE H + I ++ D +A ++ D+T+ + S ++
Sbjct: 285 LDAKTGERLAKFEMG-HEIDSINVSQ-DEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 342
Query: 185 EKGVNCVDYYHGG 197
G + G
Sbjct: 343 GHGPQVITTADMG 355
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 39.1 bits (89), Expect = 2e-04
Identities = 27/213 (12%), Positives = 56/213 (26%), Gaps = 2/213 (0%)
Query: 16 DRVKCCDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTG 75
+ + ++ + + V + +N + + P+ A K VT
Sbjct: 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTN 134
Query: 76 SDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQ 135
+ D V V N T ++ + + D M I + +
Sbjct: 135 NGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194
Query: 136 QVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYH 195
V + + TV + G+ + +
Sbjct: 195 TVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTP 253
Query: 196 GGDKPYLISGADDRLVKIWDYQNKTCVQTLESG 228
G K Y ++ + V + D T T+ G
Sbjct: 254 DGKKVY-VALSFCNTVSVIDTATNTITATMAVG 285
Score = 31.4 bits (69), Expect = 0.073
Identities = 14/115 (12%), Positives = 35/115 (30%)
Query: 32 ASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQVCVFNYNTLER 91
A+ + ++ V + +N+ + V P+ A V + V + + T
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV 66
Query: 92 FHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEGHTHYVM 146
+ A S + +T+ + + + V G + +
Sbjct: 67 IATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGL 121
Score = 30.6 bits (67), Expect = 0.13
Identities = 6/76 (7%), Positives = 23/76 (30%), Gaps = 2/76 (2%)
Query: 73 VTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTS-SDDMLIKLWNWEKA 131
+ S+ + V + + + + S+ + P + + + + + +
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 132 WACQQVFEGHTHYVMQ 147
V G + +
Sbjct: 65 NVIATVPAGSSPQGVA 80
Score = 25.6 bits (54), Expect = 5.0
Identities = 11/64 (17%), Positives = 18/64 (28%), Gaps = 2/64 (3%)
Query: 158 FASASLDRTVKVWQLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 217
+ + S + V + S T+ G K Y ++ A V I D
Sbjct: 5 YIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVY-VANAHSNDVSIIDTA 62
Query: 218 NKTC 221
Sbjct: 63 TNNV 66
Score = 25.6 bits (54), Expect = 5.9
Identities = 8/80 (10%), Positives = 22/80 (27%), Gaps = 2/80 (2%)
Query: 116 TSSDDMLIKLWNWEKAWACQQVFEGHTHYVMQIVINPKDNNTFASASLDRTVKVWQLGSA 175
+S+ I + + ++ M VI+P + + + V + +
Sbjct: 7 ANSESDNISVIDVTS-NKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 176 SPNFTLEGHEKGVNCVDYYH 195
+ T+
Sbjct: 65 NVIATVPAGSSPQGVAVSPD 84
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 34.5 bits (79), Expect = 0.009
Identities = 28/167 (16%), Positives = 47/167 (28%), Gaps = 16/167 (9%)
Query: 21 CDLHPTEPWMLASLYNGHVHVWNHETNQNVKSFEVCDLPVRAAKFVPRKNWIVTGSDDMQ 80
D T + ++ YN V T +N + + V R A V N+ G +
Sbjct: 181 TDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVP 240
Query: 81 VCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWEKAWACQQVFEG 140
V V E + + F+ + + +K +FE
Sbjct: 241 V-VDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDK---LDDLFED 296
Query: 141 HTHYVMQIVINP------------KDNNTFASASLDRTVKVWQLGSA 175
IV P N + + +D V W + A
Sbjct: 297 KIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADA 343
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 30.6 bits (67), Expect = 0.16
Identities = 11/84 (13%), Positives = 24/84 (28%), Gaps = 1/84 (1%)
Query: 111 QPFLLTSSDDMLIKLWNWEKAWACQQV-FEGHTHYVMQIVINPKDNNTFASASLDRTVKV 169
Q + S + I +WN A V +V++P + + V
Sbjct: 4 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLA 63
Query: 170 WQLGSASPNFTLEGHEKGVNCVDY 193
+++ T + +
Sbjct: 64 YRIAPDDGALTFAAESALPGSLTH 87
Score = 26.3 bits (56), Expect = 3.8
Identities = 11/118 (9%), Positives = 28/118 (23%), Gaps = 3/118 (2%)
Query: 70 NWIVTGSDDMQVCVFNYNTLERFHSFEAHSDYVRCVAVHPTQPFLLTSSDDMLIKLWNWE 129
+ V D + TL+ + + + + + P L +
Sbjct: 200 SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSV 259
Query: 130 KAWACQQVFEGHTH---YVMQIVINPKDNNTFASASLDRTVKVWQLGSASPNFTLEGH 184
EG ++ A+ + V+++ +G
Sbjct: 260 SEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGR 317
>d2zcta1 c.47.1.10 (A:6-242) Peroxiredoxin {Aeropyrum pernix [TaxId:
56636]}
Length = 237
Score = 27.9 bits (61), Expect = 1.1
Identities = 5/33 (15%), Positives = 12/33 (36%)
Query: 171 QLGSASPNFTLEGHEKGVNCVDYYHGGDKPYLI 203
+G P + + D+Y K +++
Sbjct: 2 LIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVL 34
>d2gu3a2 d.17.1.6 (A:34-98) Uncharacterized protein YpmB {Bacillus
subtilis [TaxId: 1423]}
Length = 65
Score = 24.4 bits (53), Expect = 3.6
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 182 EGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
E V+ V+ + G +K Y++ G D + +
Sbjct: 15 ETDLAHVDQVETFVGKEKYYVVKGTDKKGTAL 46
>d2b3ca_ g.3.7.1 (A:) Scorpion toxin {Centruroides sculpturatus,
beta [TaxId: 218467]}
Length = 64
Score = 23.6 bits (51), Expect = 7.3
Identities = 10/39 (25%), Positives = 12/39 (30%), Gaps = 9/39 (23%)
Query: 190 CVDYYHGGDKPYLISGA-------DDRLVKIWDYQNKTC 221
C + GG Y D + W NKTC
Sbjct: 28 CKWKHIGGSYGYCYGFGCYCEGLPDS--TQTWPLPNKTC 64
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.135 0.447
Gapped
Lambda K H
0.267 0.0487 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 911,559
Number of extensions: 40793
Number of successful extensions: 373
Number of sequences better than 10.0: 1
Number of HSP's gapped: 220
Number of HSP's successfully gapped: 138
Length of query: 229
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 147
Effective length of database: 1,281,736
Effective search space: 188415192
Effective search space used: 188415192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.0 bits)