Query psy4654
Match_columns 559
No_of_seqs 343 out of 551
Neff 5.2
Searched_HMMs 29240
Date Fri Aug 16 22:21:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4654.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4654hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ocu_A Lipoprotein E; hydrolas 99.2 1.2E-11 4.1E-16 124.7 8.3 107 375-488 56-188 (262)
2 3pct_A Class C acid phosphatas 99.2 2.7E-11 9.3E-16 122.0 8.4 106 376-488 57-188 (260)
3 1ltq_A Polynucleotide kinase; 98.9 5.5E-09 1.9E-13 104.1 11.0 118 376-496 158-293 (301)
4 2obb_A Hypothetical protein; s 98.9 2.9E-09 1E-13 98.1 7.9 70 376-448 2-72 (142)
5 2i33_A Acid phosphatase; HAD s 98.7 4.4E-08 1.5E-12 97.9 8.7 110 374-489 56-188 (258)
6 1xpj_A Hypothetical protein; s 98.7 6.3E-08 2.1E-12 86.2 8.8 73 378-450 2-86 (126)
7 2wm8_A MDP-1, magnesium-depend 98.6 1.1E-07 3.6E-12 88.5 9.1 114 376-496 26-160 (187)
8 3m9l_A Hydrolase, haloacid deh 98.5 2.4E-07 8.1E-12 85.8 9.9 143 376-528 5-195 (205)
9 3l8h_A Putative haloacid dehal 98.5 2.9E-07 9.8E-12 84.1 9.0 116 377-495 1-140 (179)
10 2gmw_A D,D-heptose 1,7-bisphos 98.4 8.4E-07 2.9E-11 84.4 10.8 117 377-496 25-171 (211)
11 3ib6_A Uncharacterized protein 98.4 1.5E-06 5.3E-11 80.9 12.1 117 377-496 3-138 (189)
12 2p9j_A Hypothetical protein AQ 98.4 7.2E-07 2.5E-11 80.5 8.7 109 377-495 9-122 (162)
13 1k1e_A Deoxy-D-mannose-octulos 98.4 6.9E-07 2.4E-11 82.9 8.5 107 377-495 8-121 (180)
14 3mmz_A Putative HAD family hyd 98.3 1.1E-06 3.7E-11 81.7 8.5 105 376-495 11-124 (176)
15 1zrn_A L-2-haloacid dehalogena 98.3 9.5E-07 3.2E-11 82.7 8.1 90 401-496 96-191 (232)
16 2pr7_A Haloacid dehalogenase/e 98.3 1.3E-06 4.3E-11 75.3 7.5 107 376-495 1-113 (137)
17 2fpr_A Histidine biosynthesis 98.3 7.6E-07 2.6E-11 82.7 6.4 119 375-496 12-156 (176)
18 2b82_A APHA, class B acid phos 98.3 5E-07 1.7E-11 86.8 4.6 114 376-496 36-181 (211)
19 3fvv_A Uncharacterized protein 98.2 4.5E-06 1.5E-10 78.5 10.7 100 400-506 92-207 (232)
20 1nnl_A L-3-phosphoserine phosp 98.2 2.7E-06 9.2E-11 79.8 8.6 92 400-494 86-192 (225)
21 2no4_A (S)-2-haloacid dehaloge 98.2 3.8E-06 1.3E-10 79.4 9.3 90 401-496 106-201 (240)
22 3m1y_A Phosphoserine phosphata 98.2 3.1E-06 1.1E-10 78.2 8.1 96 400-505 75-186 (217)
23 2oda_A Hypothetical protein ps 98.2 3.1E-06 1.1E-10 80.2 8.2 111 376-495 5-127 (196)
24 2o2x_A Hypothetical protein; s 98.2 5.2E-06 1.8E-10 78.9 9.4 119 375-496 29-177 (218)
25 2fea_A 2-hydroxy-3-keto-5-meth 98.2 4E-06 1.4E-10 80.1 8.4 90 400-496 77-186 (236)
26 3umb_A Dehalogenase-like hydro 98.2 7E-06 2.4E-10 76.4 9.8 119 400-528 99-226 (233)
27 3iru_A Phoshonoacetaldehyde hy 98.1 6.8E-06 2.3E-10 78.4 9.7 91 400-495 111-208 (277)
28 1rku_A Homoserine kinase; phos 98.1 9.3E-06 3.2E-10 75.0 10.2 89 400-495 69-167 (206)
29 3kzx_A HAD-superfamily hydrola 98.1 4.5E-06 1.6E-10 78.0 7.6 98 399-505 102-206 (231)
30 2pib_A Phosphorylated carbohyd 98.1 6.6E-06 2.3E-10 74.8 8.4 92 399-496 83-180 (216)
31 3qnm_A Haloacid dehalogenase-l 98.1 9.5E-06 3.3E-10 75.3 9.6 120 400-530 107-234 (240)
32 3zvl_A Bifunctional polynucleo 98.1 1.1E-05 3.8E-10 85.4 10.9 119 376-495 57-213 (416)
33 3ewi_A N-acylneuraminate cytid 98.1 6.3E-06 2.1E-10 77.1 7.7 103 376-495 8-121 (168)
34 4eek_A Beta-phosphoglucomutase 98.1 1E-05 3.4E-10 77.3 8.8 128 399-535 109-252 (259)
35 3mc1_A Predicted phosphatase, 98.0 6.2E-06 2.1E-10 76.5 7.1 119 400-528 86-214 (226)
36 3e58_A Putative beta-phosphogl 98.0 5.4E-06 1.8E-10 75.2 6.5 96 400-504 89-190 (214)
37 1zjj_A Hypothetical protein PH 98.0 1.5E-05 5.1E-10 77.7 9.9 102 377-495 1-104 (263)
38 3skx_A Copper-exporting P-type 98.0 2.8E-05 9.5E-10 74.8 11.6 82 400-494 144-226 (280)
39 2fi1_A Hydrolase, haloacid deh 98.0 7.2E-06 2.5E-10 74.1 6.9 86 401-495 83-174 (190)
40 3um9_A Haloacid dehalogenase, 98.0 2.5E-05 8.7E-10 72.3 10.5 114 399-521 95-217 (230)
41 4ex6_A ALNB; modified rossman 98.0 8E-06 2.7E-10 76.4 7.1 91 400-496 104-200 (237)
42 1l7m_A Phosphoserine phosphata 98.0 1.2E-05 4E-10 73.4 7.5 90 401-495 77-181 (211)
43 2nyv_A Pgpase, PGP, phosphogly 98.0 2.7E-05 9.2E-10 73.4 10.0 90 400-495 83-178 (222)
44 3sd7_A Putative phosphatase; s 98.0 1.4E-05 4.7E-10 75.3 7.9 91 400-496 110-207 (240)
45 3e8m_A Acylneuraminate cytidyl 98.0 2.7E-05 9.3E-10 70.2 9.5 108 376-495 3-117 (164)
46 3kbb_A Phosphorylated carbohyd 98.0 3.6E-05 1.2E-09 71.4 10.4 90 401-496 85-180 (216)
47 3s6j_A Hydrolase, haloacid deh 98.0 1.3E-05 4.5E-10 74.2 7.4 122 399-530 90-221 (233)
48 3qgm_A P-nitrophenyl phosphata 97.9 1.2E-05 4.2E-10 77.8 7.2 66 377-449 8-75 (268)
49 3n07_A 3-deoxy-D-manno-octulos 97.9 5.7E-06 1.9E-10 78.9 4.8 108 376-495 24-138 (195)
50 3n1u_A Hydrolase, HAD superfam 97.9 1E-05 3.5E-10 76.2 6.4 108 376-495 18-132 (191)
51 2r8e_A 3-deoxy-D-manno-octulos 97.9 2.7E-05 9.2E-10 72.7 9.0 111 376-496 25-140 (188)
52 1l6r_A Hypothetical protein TA 97.9 2.5E-05 8.7E-10 75.4 9.1 58 377-443 5-62 (227)
53 4eze_A Haloacid dehalogenase-l 97.9 1.6E-05 5.6E-10 81.2 7.8 89 400-494 179-283 (317)
54 3mn1_A Probable YRBI family ph 97.9 3.1E-05 1.1E-09 72.6 8.9 106 376-495 18-132 (189)
55 3pgv_A Haloacid dehalogenase-l 97.9 1.6E-05 5.4E-10 78.4 7.0 69 363-443 10-78 (285)
56 2ah5_A COG0546: predicted phos 97.9 3E-05 1E-09 72.4 8.0 89 401-496 85-177 (210)
57 3ij5_A 3-deoxy-D-manno-octulos 97.8 4.1E-05 1.4E-09 73.8 8.7 106 376-495 48-162 (211)
58 1te2_A Putative phosphatase; s 97.8 5.5E-05 1.9E-09 69.3 9.1 90 400-495 94-189 (226)
59 2w43_A Hypothetical 2-haloalka 97.8 2.5E-05 8.5E-10 71.9 6.7 87 400-496 74-166 (201)
60 3pdw_A Uncharacterized hydrola 97.8 1.5E-05 5E-10 77.3 5.4 60 377-443 6-65 (266)
61 3nuq_A Protein SSM1, putative 97.8 8.1E-05 2.8E-09 72.4 10.5 91 399-495 141-244 (282)
62 3k1z_A Haloacid dehalogenase-l 97.8 6.9E-05 2.3E-09 72.5 10.0 96 400-505 106-208 (263)
63 2hsz_A Novel predicted phospha 97.8 7.9E-05 2.7E-09 71.3 10.1 90 401-496 115-210 (243)
64 4ap9_A Phosphoserine phosphata 97.8 2E-05 6.7E-10 71.3 5.3 110 400-527 79-195 (201)
65 3epr_A Hydrolase, haloacid deh 97.8 2.5E-05 8.6E-10 76.0 6.3 61 376-443 4-64 (264)
66 1qq5_A Protein (L-2-haloacid d 97.8 7.1E-05 2.4E-09 71.6 9.3 94 400-504 93-192 (253)
67 3d6j_A Putative haloacid dehal 97.8 2.8E-05 9.5E-10 71.2 5.8 89 401-495 90-184 (225)
68 3kd3_A Phosphoserine phosphohy 97.7 0.00011 3.7E-09 66.9 9.7 94 401-499 83-189 (219)
69 3nas_A Beta-PGM, beta-phosphog 97.7 6.2E-05 2.1E-09 70.2 8.2 94 401-505 93-192 (233)
70 3l5k_A Protein GS1, haloacid d 97.7 2.6E-05 8.7E-10 74.1 5.5 90 400-495 112-212 (250)
71 3cnh_A Hydrolase family protei 97.7 8.5E-05 2.9E-09 67.9 8.6 88 401-495 87-180 (200)
72 1swv_A Phosphonoacetaldehyde h 97.7 7.5E-05 2.6E-09 71.4 8.1 93 401-496 104-201 (267)
73 2om6_A Probable phosphoserine 97.7 0.0002 6.8E-09 66.1 10.5 97 402-504 101-204 (235)
74 1vjr_A 4-nitrophenylphosphatas 97.7 5.7E-05 1.9E-09 73.0 7.0 62 375-443 15-76 (271)
75 3smv_A S-(-)-azetidine-2-carbo 97.7 0.00036 1.2E-08 64.4 12.1 97 400-505 99-202 (240)
76 3dv9_A Beta-phosphoglucomutase 97.7 0.0001 3.4E-09 69.0 8.4 90 400-496 108-205 (247)
77 2hoq_A Putative HAD-hydrolase 97.7 0.00017 5.7E-09 68.2 9.9 90 401-496 95-191 (241)
78 3dao_A Putative phosphatse; st 97.7 3.8E-05 1.3E-09 75.7 5.7 60 364-431 11-70 (283)
79 2zg6_A Putative uncharacterize 97.7 2.4E-05 8.2E-10 73.5 3.9 86 401-496 96-188 (220)
80 1wr8_A Phosphoglycolate phosph 97.7 5.5E-05 1.9E-09 72.5 6.5 50 377-432 3-52 (231)
81 3p96_A Phosphoserine phosphata 97.7 6.8E-05 2.3E-09 78.5 7.7 92 400-495 256-361 (415)
82 2i6x_A Hydrolase, haloacid deh 97.6 0.00011 3.9E-09 67.5 8.3 90 400-496 89-190 (211)
83 3ddh_A Putative haloacid dehal 97.6 0.00017 5.9E-09 66.1 9.4 89 400-496 105-198 (234)
84 1yv9_A Hydrolase, haloacid deh 97.6 8.3E-05 2.8E-09 71.7 7.4 62 376-444 4-66 (264)
85 2go7_A Hydrolase, haloacid deh 97.6 3.8E-05 1.3E-09 69.0 4.6 89 400-495 85-179 (207)
86 2hx1_A Predicted sugar phospha 97.6 6.8E-05 2.3E-09 73.5 6.8 61 376-443 13-73 (284)
87 3dnp_A Stress response protein 97.6 7.7E-05 2.6E-09 72.9 7.2 58 377-443 6-63 (290)
88 4dw8_A Haloacid dehalogenase-l 97.6 7.4E-05 2.5E-09 72.7 6.7 57 377-442 5-61 (279)
89 2hcf_A Hydrolase, haloacid deh 97.6 0.00025 8.5E-09 65.7 9.8 91 401-495 94-192 (234)
90 3ed5_A YFNB; APC60080, bacillu 97.6 0.00013 4.4E-09 67.7 7.7 118 400-528 103-230 (238)
91 3qxg_A Inorganic pyrophosphata 97.6 0.00014 4.7E-09 68.7 8.1 90 400-496 109-206 (243)
92 2hi0_A Putative phosphoglycola 97.6 0.0002 6.9E-09 68.0 9.2 90 401-496 111-205 (240)
93 2wf7_A Beta-PGM, beta-phosphog 97.6 0.00014 4.6E-09 66.8 7.7 93 401-504 92-190 (221)
94 4g9b_A Beta-PGM, beta-phosphog 97.6 0.00015 5.2E-09 69.7 8.4 88 401-496 96-189 (243)
95 2b0c_A Putative phosphatase; a 97.6 5.2E-05 1.8E-09 69.3 4.7 91 400-496 91-188 (206)
96 3mpo_A Predicted hydrolase of 97.6 7E-05 2.4E-09 72.9 5.8 58 377-443 5-62 (279)
97 3u26_A PF00702 domain protein; 97.6 0.00023 7.7E-09 66.0 8.9 89 400-495 100-195 (234)
98 2ho4_A Haloacid dehalogenase-l 97.5 0.0001 3.6E-09 70.0 6.8 62 376-444 6-67 (259)
99 3umc_A Haloacid dehalogenase; 97.5 6.9E-05 2.4E-09 70.6 5.4 94 401-504 121-218 (254)
100 1rkq_A Hypothetical protein YI 97.5 0.0001 3.4E-09 72.9 6.6 58 377-443 5-62 (282)
101 1xvi_A MPGP, YEDP, putative ma 97.5 0.00013 4.3E-09 72.2 7.2 60 376-444 8-67 (275)
102 2qlt_A (DL)-glycerol-3-phospha 97.5 0.00011 3.8E-09 71.6 6.5 90 400-495 114-216 (275)
103 4gib_A Beta-phosphoglucomutase 97.5 0.00024 8E-09 68.5 8.5 88 401-496 117-210 (250)
104 2pq0_A Hypothetical conserved 97.5 0.00014 4.9E-09 70.1 7.0 48 377-430 3-50 (258)
105 3fzq_A Putative hydrolase; YP_ 97.5 8.9E-05 3E-09 71.4 5.5 47 377-429 5-51 (274)
106 2oyc_A PLP phosphatase, pyrido 97.5 0.00013 4.6E-09 72.6 6.9 61 376-443 20-80 (306)
107 4dcc_A Putative haloacid dehal 97.5 0.00035 1.2E-08 65.6 9.3 92 401-496 113-213 (229)
108 3umg_A Haloacid dehalogenase; 97.5 0.00012 4E-09 68.5 5.9 95 400-504 116-214 (254)
109 1nrw_A Hypothetical protein, h 97.5 0.00023 7.7E-09 70.3 8.2 59 377-444 4-62 (288)
110 2pke_A Haloacid delahogenase-l 97.5 0.00048 1.7E-08 65.4 10.1 87 401-496 113-203 (251)
111 3r4c_A Hydrolase, haloacid deh 97.5 0.0001 3.5E-09 71.3 5.5 48 377-429 12-59 (268)
112 2hdo_A Phosphoglycolate phosph 97.5 0.00018 6.1E-09 66.2 6.8 89 400-495 83-177 (209)
113 3i28_A Epoxide hydrolase 2; ar 97.4 0.00051 1.7E-08 71.1 10.3 93 401-496 101-200 (555)
114 1nf2_A Phosphatase; structural 97.4 0.00018 6E-09 70.5 6.4 53 378-437 3-55 (268)
115 2b30_A Pvivax hypothetical pro 97.4 0.00017 5.9E-09 72.4 6.2 52 377-434 27-79 (301)
116 3bwv_A Putative 5'(3')-deoxyri 97.4 0.00018 6.3E-09 65.8 5.8 51 400-451 69-123 (180)
117 3f9r_A Phosphomannomutase; try 97.4 0.00016 5.5E-09 70.9 5.5 46 377-428 4-49 (246)
118 2rbk_A Putative uncharacterize 97.3 0.00019 6.4E-09 69.6 5.5 46 378-429 3-48 (261)
119 2x4d_A HLHPP, phospholysine ph 97.3 0.00036 1.2E-08 66.1 7.3 64 377-443 12-75 (271)
120 2c4n_A Protein NAGD; nucleotid 97.3 0.00032 1.1E-08 65.2 6.7 60 377-443 3-62 (250)
121 3l7y_A Putative uncharacterize 97.3 0.00021 7.2E-09 71.1 5.7 47 377-429 37-84 (304)
122 3nvb_A Uncharacterized protein 97.3 0.00051 1.8E-08 72.7 8.9 115 373-497 218-354 (387)
123 1rlm_A Phosphatase; HAD family 97.3 0.00017 6E-09 70.5 4.8 57 377-442 3-60 (271)
124 2i7d_A 5'(3')-deoxyribonucleot 97.3 0.00027 9.2E-09 65.5 5.5 41 399-442 72-113 (193)
125 3vay_A HAD-superfamily hydrola 97.2 0.0015 5.2E-08 60.4 10.2 90 401-505 106-202 (230)
126 2gfh_A Haloacid dehalogenase-l 97.2 0.0016 5.4E-08 63.4 10.7 88 401-495 122-216 (260)
127 2zos_A MPGP, mannosyl-3-phosph 97.2 0.00031 1.1E-08 68.2 5.4 55 378-443 3-57 (249)
128 3kc2_A Uncharacterized protein 97.1 0.00044 1.5E-08 72.0 6.4 68 376-450 12-82 (352)
129 2amy_A PMM 2, phosphomannomuta 97.1 0.00041 1.4E-08 66.9 5.1 46 376-428 5-50 (246)
130 3zx4_A MPGP, mannosyl-3-phosph 97.0 0.00037 1.3E-08 67.5 3.7 42 379-427 2-43 (259)
131 2ght_A Carboxy-terminal domain 97.0 0.0014 4.9E-08 61.6 7.6 74 376-451 14-104 (181)
132 1u02_A Trehalose-6-phosphate p 97.0 0.00072 2.5E-08 65.4 5.5 57 378-439 2-58 (239)
133 2hhl_A CTD small phosphatase-l 97.0 0.0014 4.9E-08 62.6 7.4 74 376-451 27-117 (195)
134 2p11_A Hypothetical protein; p 96.9 0.00067 2.3E-08 64.1 5.0 86 400-496 96-187 (231)
135 2fue_A PMM 1, PMMH-22, phospho 96.9 0.00063 2.2E-08 66.5 4.8 46 376-428 12-57 (262)
136 3gyg_A NTD biosynthesis operon 96.9 0.0014 4.7E-08 64.4 6.9 62 376-444 21-86 (289)
137 3a1c_A Probable copper-exporti 96.9 0.0048 1.6E-07 61.0 10.7 105 375-495 141-246 (287)
138 3n28_A Phosphoserine phosphata 96.8 0.00091 3.1E-08 67.6 4.9 90 400-495 178-283 (335)
139 1q92_A 5(3)-deoxyribonucleotid 96.7 0.0013 4.4E-08 61.2 5.1 30 400-429 75-105 (197)
140 1s2o_A SPP, sucrose-phosphatas 96.6 0.0013 4.5E-08 63.6 4.4 64 378-452 4-68 (244)
141 2fdr_A Conserved hypothetical 96.3 0.0026 9.1E-08 58.5 4.4 92 402-505 89-189 (229)
142 3qle_A TIM50P; chaperone, mito 96.1 0.0066 2.2E-07 58.8 6.2 64 376-440 33-98 (204)
143 4as2_A Phosphorylcholine phosp 96.1 0.046 1.6E-06 56.3 12.6 103 400-506 143-288 (327)
144 2g80_A Protein UTR4; YEL038W, 95.8 0.04 1.4E-06 54.1 10.0 92 401-505 126-233 (253)
145 3shq_A UBLCP1; phosphatase, hy 95.1 0.042 1.4E-06 56.6 7.9 66 376-442 139-205 (320)
146 1y8a_A Hypothetical protein AF 94.3 0.0035 1.2E-07 63.4 -2.4 39 377-427 21-59 (332)
147 3j08_A COPA, copper-exporting 94.1 0.094 3.2E-06 58.6 8.3 104 376-495 436-540 (645)
148 3rfu_A Copper efflux ATPase; a 93.9 0.1 3.5E-06 59.4 8.2 105 376-495 533-638 (736)
149 3j09_A COPA, copper-exporting 93.8 0.13 4.3E-06 58.3 8.7 104 376-495 514-618 (723)
150 1f86_A Transthyretin Thr119Met 93.8 0.07 2.4E-06 47.4 5.3 48 311-359 19-66 (115)
151 4ank_A Transthyretin; hormone 93.7 0.073 2.5E-06 49.3 5.3 49 311-360 48-96 (147)
152 4gxt_A A conserved functionall 93.6 0.21 7.3E-06 52.4 9.4 102 400-505 221-343 (385)
153 4fe3_A Cytosolic 5'-nucleotida 93.6 0.19 6.7E-06 49.6 8.6 44 400-446 141-184 (297)
154 3ef0_A RNA polymerase II subun 93.3 0.098 3.3E-06 55.0 6.2 77 374-451 15-126 (372)
155 2h4e_A Transthyretin; amyloid, 93.3 0.098 3.3E-06 47.3 5.3 48 311-359 28-75 (127)
156 1oo2_A Transthyretin; retinol- 92.9 0.073 2.5E-06 47.6 3.8 48 311-359 20-67 (119)
157 3ixz_A Potassium-transporting 90.9 0.8 2.7E-05 53.9 10.6 97 396-496 601-742 (1034)
158 2zxe_A Na, K-ATPase alpha subu 90.6 0.67 2.3E-05 54.5 9.7 90 397-496 597-737 (1028)
159 2g2n_A Transthyretin-like prot 89.9 0.3 1E-05 43.4 4.5 48 311-360 22-69 (114)
160 3ar4_A Sarcoplasmic/endoplasmi 88.2 1.4 4.7E-05 51.6 9.8 89 396-495 600-718 (995)
161 3iwv_A 5-hydroxyisourate hydro 86.7 0.41 1.4E-05 43.8 3.4 49 311-360 44-93 (138)
162 1qyi_A ZR25, hypothetical prot 85.6 0.91 3.1E-05 47.7 5.8 93 400-496 215-338 (384)
163 2yj3_A Copper-transporting ATP 84.6 0.2 6.8E-06 49.0 0.0 84 400-495 136-220 (263)
164 1mhs_A Proton pump, plasma mem 83.9 2.8 9.5E-05 48.9 9.4 94 395-495 531-648 (920)
165 1yns_A E-1 enzyme; hydrolase f 83.8 0.28 9.7E-06 47.7 0.9 95 401-504 131-232 (261)
166 1yns_A E-1 enzyme; hydrolase f 82.8 2.8 9.6E-05 40.5 7.6 18 488-505 196-213 (261)
167 3e3m_A Transcriptional regulat 82.6 10 0.00035 37.7 11.9 102 402-505 172-286 (355)
168 3ef1_A RNA polymerase II subun 82.5 2.6 9E-05 45.2 7.8 78 373-451 22-134 (442)
169 3a1c_A Probable copper-exporti 82.5 0.41 1.4E-05 47.0 1.5 17 377-393 32-48 (287)
170 2h0e_A Transthyretin-like prot 81.2 0.32 1.1E-05 43.5 0.2 46 311-360 27-72 (121)
171 3b8c_A ATPase 2, plasma membra 79.2 3.1 0.00011 48.3 7.5 94 396-496 485-603 (885)
172 3k4h_A Putative transcriptiona 79.2 13 0.00043 35.3 10.8 107 395-505 111-228 (292)
173 3gyb_A Transcriptional regulat 78.8 13 0.00043 35.2 10.6 106 395-505 98-212 (280)
174 3qk7_A Transcriptional regulat 76.1 12 0.0004 36.0 9.6 107 395-505 106-223 (294)
175 3kjx_A Transcriptional regulat 74.7 16 0.00056 35.9 10.5 102 402-505 170-283 (344)
176 3dbi_A Sugar-binding transcrip 74.2 23 0.00077 34.7 11.3 107 395-505 161-278 (338)
177 3kke_A LACI family transcripti 74.0 15 0.00052 35.4 9.8 107 395-505 111-233 (303)
178 3g85_A Transcriptional regulat 74.0 14 0.00048 35.0 9.5 102 402-505 112-224 (289)
179 3qva_A Transthyretin-like prot 73.2 4.6 0.00016 35.8 5.2 34 325-360 37-70 (116)
180 3d8u_A PURR transcriptional re 72.1 38 0.0013 31.6 11.9 108 395-506 100-218 (275)
181 3k9c_A Transcriptional regulat 68.7 34 0.0011 32.6 10.9 104 395-503 106-219 (289)
182 3h5t_A Transcriptional regulat 68.1 16 0.00055 36.3 8.7 101 401-504 173-303 (366)
183 3miz_A Putative transcriptiona 67.9 15 0.0005 35.3 8.1 105 401-506 115-234 (301)
184 3egc_A Putative ribose operon 67.8 17 0.00057 34.6 8.5 107 395-505 105-222 (291)
185 3ksm_A ABC-type sugar transpor 67.8 17 0.00057 34.0 8.3 105 395-506 103-222 (276)
186 3gv0_A Transcriptional regulat 67.4 26 0.0009 33.3 9.8 101 402-504 112-223 (288)
187 1qpz_A PURA, protein (purine n 66.5 35 0.0012 33.4 10.7 100 402-503 162-272 (340)
188 4fe7_A Xylose operon regulator 66.2 37 0.0013 34.6 11.2 107 395-505 119-239 (412)
189 2h0a_A TTHA0807, transcription 65.7 41 0.0014 31.4 10.7 124 374-505 76-216 (276)
190 3h5o_A Transcriptional regulat 65.2 54 0.0018 32.0 11.8 103 401-505 162-275 (339)
191 3hcw_A Maltose operon transcri 64.2 26 0.00089 33.5 9.1 99 402-505 116-228 (295)
192 2fep_A Catabolite control prot 63.7 42 0.0014 31.9 10.5 105 395-504 113-230 (289)
193 3jvd_A Transcriptional regulat 63.2 36 0.0012 33.4 10.1 100 401-505 158-267 (333)
194 2o20_A Catabolite control prot 62.0 46 0.0016 32.4 10.6 101 402-505 165-275 (332)
195 3e61_A Putative transcriptiona 62.0 20 0.00069 33.7 7.7 103 394-505 101-213 (277)
196 3o74_A Fructose transport syst 61.0 33 0.0011 31.8 9.0 105 395-505 100-215 (272)
197 3g1w_A Sugar ABC transporter; 61.0 45 0.0015 31.7 10.1 107 395-506 105-222 (305)
198 3tb6_A Arabinose metabolism tr 60.8 21 0.00073 33.7 7.7 109 395-505 117-237 (298)
199 3huu_A Transcription regulator 60.2 32 0.0011 33.0 8.9 103 395-505 124-238 (305)
200 4ehi_A Bifunctional purine bio 57.5 9 0.00031 42.0 4.7 91 403-505 35-125 (534)
201 1dbq_A Purine repressor; trans 56.5 66 0.0023 30.2 10.4 101 402-504 111-222 (289)
202 2rgy_A Transcriptional regulat 56.0 89 0.003 29.5 11.2 105 395-504 108-224 (290)
203 3hs3_A Ribose operon repressor 55.4 27 0.00091 33.1 7.4 97 402-506 108-215 (277)
204 2fqx_A Membrane lipoprotein TM 54.6 41 0.0014 33.1 8.9 95 409-505 120-223 (318)
205 3brq_A HTH-type transcriptiona 54.5 85 0.0029 29.3 10.8 106 395-504 119-235 (296)
206 1jye_A Lactose operon represso 54.4 73 0.0025 31.3 10.7 100 402-505 164-274 (349)
207 2hsg_A Glucose-resistance amyl 54.1 45 0.0015 32.5 8.9 101 402-505 162-275 (332)
208 3gbv_A Putative LACI-family tr 53.7 63 0.0021 30.4 9.7 105 395-505 113-232 (304)
209 3h75_A Periplasmic sugar-bindi 50.8 78 0.0027 30.9 10.2 106 395-505 118-241 (350)
210 3clk_A Transcription regulator 50.4 80 0.0027 29.8 9.9 105 395-504 105-220 (290)
211 4dw8_A Haloacid dehalogenase-l 49.2 58 0.002 30.7 8.6 35 460-494 197-234 (279)
212 3c3k_A Alanine racemase; struc 48.4 1.1E+02 0.0036 28.9 10.4 105 395-506 104-221 (285)
213 3bil_A Probable LACI-family tr 47.4 1.3E+02 0.0046 29.4 11.3 100 401-505 168-277 (348)
214 2iks_A DNA-binding transcripti 47.0 91 0.0031 29.4 9.7 100 402-505 123-233 (293)
215 2j5v_A Glutamate 5-kinase; pro 46.7 87 0.003 32.4 10.1 129 377-506 4-172 (367)
216 3brs_A Periplasmic binding pro 45.9 1.1E+02 0.0037 28.6 10.0 98 402-504 114-223 (289)
217 3nwy_A Uridylate kinase; allos 45.7 86 0.0029 31.3 9.5 130 376-508 49-210 (281)
218 2dri_A D-ribose-binding protei 45.2 72 0.0025 29.8 8.6 103 395-505 101-215 (271)
219 3bbl_A Regulatory protein of L 44.8 1.4E+02 0.0047 28.1 10.6 101 402-505 110-224 (287)
220 3zzm_A Bifunctional purine bio 43.5 6.6 0.00023 42.9 1.0 84 403-505 21-111 (523)
221 2qu7_A Putative transcriptiona 43.0 1.3E+02 0.0045 28.2 10.1 102 402-505 107-223 (288)
222 2x7x_A Sensor protein; transfe 42.2 1.2E+02 0.0041 29.3 9.9 98 402-504 111-221 (325)
223 3l6u_A ABC-type sugar transpor 39.9 74 0.0025 29.9 7.7 102 395-504 108-227 (293)
224 3m9w_A D-xylose-binding peripl 39.8 1.2E+02 0.004 29.0 9.2 108 395-506 102-223 (313)
225 3cs3_A Sugar-binding transcrip 36.8 2.2E+02 0.0076 26.4 10.6 100 402-506 103-214 (277)
226 3ctp_A Periplasmic binding pro 36.6 81 0.0028 30.6 7.6 101 402-505 157-267 (330)
227 1byk_A Protein (trehalose oper 36.6 1.2E+02 0.0042 27.8 8.6 96 402-505 100-205 (255)
228 2pq0_A Hypothetical conserved 36.6 1E+02 0.0036 28.6 8.1 35 461-495 184-221 (258)
229 3rot_A ABC sugar transporter, 34.7 1.2E+02 0.0042 28.7 8.4 104 395-505 108-225 (297)
230 1gud_A ALBP, D-allose-binding 34.7 1.6E+02 0.0054 27.8 9.2 104 395-505 110-227 (288)
231 3fau_A NEDD4-binding protein 2 34.3 70 0.0024 25.6 5.6 31 415-445 32-70 (82)
232 2h3h_A Sugar ABC transporter, 34.3 3.1E+02 0.011 26.0 11.4 104 395-505 101-216 (313)
233 3gyg_A NTD biosynthesis operon 34.1 30 0.001 33.1 3.9 99 400-505 122-255 (289)
234 1qyi_A ZR25, hypothetical prot 33.6 13 0.00044 38.9 1.3 15 377-391 1-15 (384)
235 2ioy_A Periplasmic sugar-bindi 33.0 2.1E+02 0.0072 26.7 9.7 103 395-505 101-216 (283)
236 2a1f_A Uridylate kinase; PYRH, 32.1 2.7E+02 0.0093 26.5 10.4 132 376-509 7-170 (247)
237 2yj3_A Copper-transporting ATP 37.7 10 0.00034 36.7 0.0 17 376-392 27-43 (263)
238 1ybd_A Uridylate kinase; alpha 31.4 2.2E+02 0.0074 26.8 9.5 131 376-508 6-168 (239)
239 2yvq_A Carbamoyl-phosphate syn 31.1 67 0.0023 28.6 5.5 39 402-448 36-74 (143)
240 3l49_A ABC sugar (ribose) tran 30.2 1.8E+02 0.0061 27.1 8.7 105 395-505 103-224 (291)
241 2rjo_A Twin-arginine transloca 30.1 2.1E+02 0.0072 27.5 9.4 105 395-506 114-232 (332)
242 3q3v_A Phosphoglycerate kinase 29.9 1E+02 0.0035 32.7 7.3 82 403-484 43-154 (403)
243 1php_A 3-phosphoglycerate kina 29.7 70 0.0024 33.8 6.0 82 403-484 38-150 (394)
244 2wzb_A Phosphoglycerate kinase 28.1 65 0.0022 34.3 5.5 94 403-497 40-181 (416)
245 1vpe_A Phosphoglycerate kinase 27.5 79 0.0027 33.4 6.0 82 403-484 37-149 (398)
246 3oz7_A Phosphoglycerate kinase 26.7 71 0.0024 34.0 5.5 102 385-495 33-181 (417)
247 4gxt_A A conserved functionall 26.7 21 0.00072 37.2 1.4 20 373-392 36-55 (385)
248 1g8m_A Aicar transformylase-IM 26.4 17 0.00059 40.3 0.7 83 402-504 15-104 (593)
249 3dnp_A Stress response protein 26.0 1.4E+02 0.0047 28.2 7.0 35 460-494 202-239 (290)
250 8abp_A L-arabinose-binding pro 24.6 1.4E+02 0.0048 28.1 6.8 87 418-505 134-232 (306)
251 2fvy_A D-galactose-binding per 24.6 3.6E+02 0.012 25.1 9.7 105 395-505 108-236 (309)
252 3gkn_A Bacterioferritin comigr 24.1 1.2E+02 0.0042 25.9 5.8 41 402-445 55-95 (163)
253 2vk2_A YTFQ, ABC transporter p 24.0 3.9E+02 0.013 25.1 10.0 105 395-504 105-226 (306)
254 1qpg_A PGK, 3-phosphoglycerate 23.8 1E+02 0.0034 32.9 5.9 94 403-497 40-179 (415)
255 3o1i_D Periplasmic protein TOR 23.6 3.9E+02 0.013 24.8 9.8 104 395-505 111-227 (304)
256 4fey_A Phosphoglycerate kinase 23.6 74 0.0025 33.6 4.9 80 404-483 42-147 (395)
257 3nme_A Ptpkis1 protein, SEX4 g 23.4 83 0.0028 31.3 5.1 79 290-388 167-246 (294)
258 2fn9_A Ribose ABC transporter, 22.7 4.1E+02 0.014 24.6 9.7 99 402-506 108-225 (290)
259 2wfc_A Peroxiredoxin 5, PRDX5; 21.8 1.5E+02 0.0051 26.3 6.1 38 403-443 53-91 (167)
260 1tp9_A Peroxiredoxin, PRX D (t 21.5 1.5E+02 0.005 25.9 5.8 37 403-442 57-94 (162)
261 16pk_A PGK, 3-phosphoglycerate 21.2 1.3E+02 0.0044 32.0 6.2 81 403-483 37-166 (415)
262 3d02_A Putative LACI-type tran 20.3 5.2E+02 0.018 24.0 11.0 107 395-506 105-224 (303)
No 1
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=99.23 E-value=1.2e-11 Score=124.72 Aligned_cols=107 Identities=15% Similarity=0.197 Sum_probs=89.6
Q ss_pred CCCeeEEEeeccceecccc---------------------ccCCCcccchhHHHHHHHHHHCCCeEEEEecCCch-hhHH
Q psy4654 375 PRTEVVVFSVDGSFTASVS---------------------VTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDM-QQGR 432 (559)
Q Consensus 375 ~~~k~VIfDIDGTlt~sd~---------------------~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~-~~~~ 432 (559)
.++++|||||||||+++.. ..+.+ ++.+|+.++++.++++|++|+|||+|+.. +++.
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~-~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~ 134 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQS-RAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSG 134 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCC-EECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCC-CCCccHHHHHHHHHHCCCeEEEEeCCCccchHHH
Confidence 4678999999999999862 13444 47899999999999999999999999998 9999
Q ss_pred HHHHHhhCCCCC-c--eeEecCCCCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhH
Q psy4654 433 VLSWLSQHNFPH-G--LVSFADGLSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSV 488 (559)
Q Consensus 433 T~~WL~qhglP~-G--~L~lr~g~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~a 488 (559)
|+.||.++|||. + .|+|+++. .+|...++.|.. .|..|++-+|| ..|+..
T Consensus 135 T~~~L~~lGi~~~~~~~Lilr~~~-----~~K~~~r~~l~~-~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 135 TIDDMKRLGFNGVEESAFYLKKDK-----SAKAARFAEIEK-QGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp HHHHHHHHTCSCCSGGGEEEESSC-----SCCHHHHHHHHH-TTEEEEEEEESSGGGGCS
T ss_pred HHHHHHHcCcCcccccceeccCCC-----CChHHHHHHHHh-cCCCEEEEECCChHHhcc
Confidence 999999999996 5 78888642 257777888753 36889999999 588875
No 2
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=99.19 E-value=2.7e-11 Score=121.99 Aligned_cols=106 Identities=15% Similarity=0.201 Sum_probs=88.6
Q ss_pred CCeeEEEeeccceecccc---------------------ccCCCcccchhHHHHHHHHHHCCCeEEEEecCCch-hhHHH
Q psy4654 376 RTEVVVFSVDGSFTASVS---------------------VTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDM-QQGRV 433 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~---------------------~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~-~~~~T 433 (559)
..++|||||||||+++.. ..|.. ++.+|+.++++.++++|++|+|||+|+.. +++.|
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~-~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T 135 (260)
T 3pct_A 57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQS-AAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGT 135 (260)
T ss_dssp -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCC-EECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHH
T ss_pred CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCC-CCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHH
Confidence 446999999999999862 13434 58999999999999999999999999998 99999
Q ss_pred HHHHhhCCCCCc---eeEecCCCCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhH
Q psy4654 434 LSWLSQHNFPHG---LVSFADGLSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSV 488 (559)
Q Consensus 434 ~~WL~qhglP~G---~L~lr~g~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~a 488 (559)
..||+++|||.. .|+|+++. .+|...++.|.. .+..|.+-+|| ..|+..
T Consensus 136 ~~~L~~lGi~~~~~~~Lilr~~~-----~~K~~~r~~L~~-~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 136 VDDMKRLGFTGVNDKTLLLKKDK-----SNKSVRFKQVED-MGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp HHHHHHHTCCCCSTTTEEEESSC-----SSSHHHHHHHHT-TTCEEEEEEESSGGGGCG
T ss_pred HHHHHHcCcCccccceeEecCCC-----CChHHHHHHHHh-cCCCEEEEECCChHHcCc
Confidence 999999999974 58888642 358888888853 37899999999 588876
No 3
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=98.89 E-value=5.5e-09 Score=104.10 Aligned_cols=118 Identities=15% Similarity=0.245 Sum_probs=90.9
Q ss_pred CCeeEEEeeccceeccccc-------cCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhh--------C
Q psy4654 376 RTEVVVFSVDGSFTASVSV-------TGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQ--------H 440 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~-------~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~q--------h 440 (559)
..+.+++|+|||+...... ++.+ ++.+|+.++++.|+++|+++.++|+|+...++.|..||++ +
T Consensus 158 ~~~~i~iD~dgtl~~~~~~~~~~~~~~~~~-~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~ 236 (301)
T 1ltq_A 158 KPKAVIFDVDGTLAKMNGRGPYDLEKCDTD-VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIA 236 (301)
T ss_dssp SCEEEEEETBTTTBCCSSCCTTCGGGGGGC-CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTT
T ss_pred ccceEEEeCCCCcccccCCCchhhhhcccc-CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhccccccccc
Confidence 4478999999999887653 3333 3789999999999999999999999999887777777777 7
Q ss_pred CCCCceeEecCCC--CCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 441 NFPHGLVSFADGL--SPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 441 glP~G~L~lr~g~--~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
|++++.+++++.. .++| ..|..+++.+.. ........+|| ..|+.+++++|+++
T Consensus 237 ~~~~~~~~~~~~~~~kp~p-~~~~~~~~~~~~-~~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 237 GVPLVMQCQREQGDTRKDD-VVKEEIFWKHIA-PHFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp CCCCSEEEECCTTCCSCHH-HHHHHHHHHHTT-TTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred CCCchheeeccCCCCcHHH-HHHHHHHHHHhc-cccceEEEeCCcHHHHHHHHHcCCeE
Confidence 9998888886532 3444 457777777721 11233456999 69999999999985
No 4
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=98.88 E-value=2.9e-09 Score=98.15 Aligned_cols=70 Identities=13% Similarity=0.145 Sum_probs=59.7
Q ss_pred CCeeEEEeeccceecccc-ccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeE
Q psy4654 376 RTEVVVFSVDGSFTASVS-VTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVS 448 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~-~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~ 448 (559)
++|+|+|||||||.+++. .++. ..+++++.+++++++||.|+++|||+......+.+||+++|+++..+.
T Consensus 2 ~~k~i~~DlDGTL~~~~~~~i~~---~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~ 72 (142)
T 2obb_A 2 NAMTIAVDFDGTIVEHRYPRIGE---EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAAN 72 (142)
T ss_dssp CCCEEEECCBTTTBCSCTTSCCC---BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEES
T ss_pred CCeEEEEECcCCCCCCCCccccc---cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEE
Confidence 368999999999999753 2222 346899999999999999999999999899999999999999987553
No 5
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=98.66 E-value=4.4e-08 Score=97.85 Aligned_cols=110 Identities=16% Similarity=0.232 Sum_probs=78.7
Q ss_pred CCCCeeEEEeeccceeccccc----------cCC---------CcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHH
Q psy4654 374 PPRTEVVVFSVDGSFTASVSV----------TGR---------DPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVL 434 (559)
Q Consensus 374 ~~~~k~VIfDIDGTlt~sd~~----------~g~---------D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~ 434 (559)
..+.++|||||||||.++... ... ..++.+|+.++++.++++|+.|.++|+|+...+..+.
T Consensus 56 ~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~ 135 (258)
T 2i33_A 56 TEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATI 135 (258)
T ss_dssp CSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHH
T ss_pred CCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHH
Confidence 345689999999999998521 000 1247899999999999999999999999999999999
Q ss_pred HHHhhCCCC---CceeEecCCCCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHH
Q psy4654 435 SWLSQHNFP---HGLVSFADGLSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVY 489 (559)
Q Consensus 435 ~WL~qhglP---~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aY 489 (559)
.+|.+.||+ +..+++++....+|. ....+. ..+..+...+|| ..|+.+-
T Consensus 136 ~~L~~~Gl~~v~~~~vi~~~~~~~K~~-----~~~~~~-~~~~~~~l~VGDs~~Di~aA 188 (258)
T 2i33_A 136 KNLERVGAPQATKEHILLQDPKEKGKE-----KRRELV-SQTHDIVLFFGDNLSDFTGF 188 (258)
T ss_dssp HHHHHHTCSSCSTTTEEEECTTCCSSH-----HHHHHH-HHHEEEEEEEESSGGGSTTC
T ss_pred HHHHHcCCCcCCCceEEECCCCCCCcH-----HHHHHH-HhCCCceEEeCCCHHHhccc
Confidence 999999987 345666643212221 222221 124456777899 6888775
No 6
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=98.65 E-value=6.3e-08 Score=86.17 Aligned_cols=73 Identities=21% Similarity=0.409 Sum_probs=58.0
Q ss_pred eeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchh------------hHHHHHHHhhCCCCCc
Q psy4654 378 EVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQ------------QGRVLSWLSQHNFPHG 445 (559)
Q Consensus 378 k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~------------~~~T~~WL~qhglP~G 445 (559)
|+|+||+||||++++.....+-.+.+++.+.++.++++|+.++++|||+... .+.+.+||++++++++
T Consensus 2 k~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~~nG~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (126)
T 1xpj_A 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVPYD 81 (126)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCCCS
T ss_pred CEEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhCCCeEEEEeCCChhhccccccccCHHHHHHHHHHHHHcCCCEE
Confidence 7899999999998754211111356789999999999999999999998754 5678899999999986
Q ss_pred eeEec
Q psy4654 446 LVSFA 450 (559)
Q Consensus 446 ~L~lr 450 (559)
.++++
T Consensus 82 ~~~~~ 86 (126)
T 1xpj_A 82 EILVG 86 (126)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 66653
No 7
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=98.60 E-value=1.1e-07 Score=88.46 Aligned_cols=114 Identities=9% Similarity=0.071 Sum_probs=77.2
Q ss_pred CCeeEEEeeccceeccccc------------------cCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHH
Q psy4654 376 RTEVVVFSVDGSFTASVSV------------------TGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWL 437 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~------------------~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL 437 (559)
..|+|+||+||||...-.. ......+.+|+.++++.++++|+.+.++|+++. ...++.+|
T Consensus 26 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~--~~~~~~~l 103 (187)
T 2wm8_A 26 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSE--IEGANQLL 103 (187)
T ss_dssp SCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSC--HHHHHHHH
T ss_pred ccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCC--hHHHHHHH
Confidence 4589999999999853210 022345789999999999999999999999984 44567788
Q ss_pred hhCCCC--CceeEecCCCCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 438 SQHNFP--HGLVSFADGLSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 438 ~qhglP--~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
++.++. ++.++... ..+|..++ .+++.+ .....=...+|| ..|+.+.+++|+.+
T Consensus 104 ~~~gl~~~f~~~~~~~--~~k~~~~~-~~~~~~--~~~~~~~~~igD~~~Di~~a~~aG~~~ 160 (187)
T 2wm8_A 104 ELFDLFRYFVHREIYP--GSKITHFE-RLQQKT--GIPFSQMIFFDDERRNIVDVSKLGVTC 160 (187)
T ss_dssp HHTTCTTTEEEEEESS--SCHHHHHH-HHHHHH--CCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred HHcCcHhhcceeEEEe--CchHHHHH-HHHHHc--CCChHHEEEEeCCccChHHHHHcCCEE
Confidence 888885 34443333 24443322 233433 222222456888 79999999999963
No 8
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=98.55 E-value=2.4e-07 Score=85.77 Aligned_cols=143 Identities=20% Similarity=0.192 Sum_probs=91.3
Q ss_pred CCeeEEEeeccceecccc-------ccC----------------------------------CCcccchhHHHHHHHHHH
Q psy4654 376 RTEVVVFSVDGSFTASVS-------VTG----------------------------------RDPKVRAGAVDIVRHWQE 414 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~-------~~g----------------------------------~D~~~~~GA~elv~~l~~ 414 (559)
..|+|+||+||||.++.. ..| ....+.+|+.++++.+++
T Consensus 5 ~~k~iifDlDGTL~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 84 (205)
T 3m9l_A 5 EIKHWVFDMDGTLTIAVHDFAAIREALSIPAEDDILTHLAALPADESAAKHAWLLEHERDLAQGSRPAPGAVELVRELAG 84 (205)
T ss_dssp GCCEEEECTBTTTEEEEECHHHHHHHTTCCTTSCHHHHHHHSCHHHHHHHHHHHHHTHHHHEEEEEECTTHHHHHHHHHH
T ss_pred cCCEEEEeCCCcCcccHHHHHHHHHHhCCCchHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHh
Confidence 358999999999998742 011 123467899999999999
Q ss_pred CCCeEEEEecCCchhhHHHHHHHhhCCCC--C--ceeEecCCCCCChhhHHHHHHHHHhhccCC--cEEEEeCC-ccchh
Q psy4654 415 LGYLIIYITGRPDMQQGRVLSWLSQHNFP--H--GLVSFADGLSPGFLGHKASYLKSLIQDHGV--VIHAAYGS-NKDVS 487 (559)
Q Consensus 415 ~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~--G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~--~i~aafGN-~~DV~ 487 (559)
+|+.+.++|+.+. ..++.+|++.|+. + +.++-.+....+| |...++.++...++ .=...+|| .+|+.
T Consensus 85 ~g~~~~i~s~~~~---~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp---~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~ 158 (205)
T 3m9l_A 85 RGYRLGILTRNAR---ELAHVTLEAIGLADCFAEADVLGRDEAPPKP---HPGGLLKLAEAWDVSPSRMVMVGDYRFDLD 158 (205)
T ss_dssp TTCEEEEECSSCH---HHHHHHHHHTTCGGGSCGGGEECTTTSCCTT---SSHHHHHHHHHTTCCGGGEEEEESSHHHHH
T ss_pred cCCeEEEEeCCch---HHHHHHHHHcCchhhcCcceEEeCCCCCCCC---CHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 9999999999864 4556777777773 2 4454443322222 22233333222233 23577899 79999
Q ss_pred HHHhcCCCCCcEEEEcCCCccccccceecchhHHHHHHHHh
Q psy4654 488 VYTSVGLKPRSIYIVGKVSKKHQSQATVLSDGYAAHLTALQ 528 (559)
Q Consensus 488 aYr~vGI~~~~If~i~~~~~~~~~~~~~~~~~Y~~hL~~l~ 528 (559)
+-+++|+. .+.++.........+....++..+ |-.+.
T Consensus 159 ~a~~aG~~---~i~v~~~~~~~~~~ad~v~~~~~e-l~~~~ 195 (205)
T 3m9l_A 159 CGRAAGTR---TVLVNLPDNPWPELTDWHARDCAQ-LRDLL 195 (205)
T ss_dssp HHHHHTCE---EEECSSSSCSCGGGCSEECSSHHH-HHHHH
T ss_pred HHHHcCCE---EEEEeCCCCcccccCCEEeCCHHH-HHHHH
Confidence 99999994 345555443444445666777654 44333
No 9
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=98.50 E-value=2.9e-07 Score=84.13 Aligned_cols=116 Identities=12% Similarity=0.167 Sum_probs=77.9
Q ss_pred CeeEEEeeccceeccccc---cCCCcccchhHHHHHHHHHHCCCeEEEEecCCch----h--------hHHHHHHHhhCC
Q psy4654 377 TEVVVFSVDGSFTASVSV---TGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDM----Q--------QGRVLSWLSQHN 441 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~---~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~----~--------~~~T~~WL~qhg 441 (559)
.|+|+||+||||++.... -..+..+.+|+.++++.++++||.+.++|+++.. . .+..+.-|++.|
T Consensus 1 ~k~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 80 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG 80 (179)
T ss_dssp CCEEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEcCCCccccCCCccCCCHHHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC
Confidence 479999999999976431 1123457899999999999999999999999852 1 134456667778
Q ss_pred CCCceeEec-----CC---CCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCC
Q psy4654 442 FPHGLVSFA-----DG---LSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 442 lP~G~L~lr-----~g---~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
.+.+.++.. +. ..++|..++ .+++.+ .....=...+|| .+|+.+-+++|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~KP~~~~~~-~~~~~~--~~~~~~~~~vGD~~~Di~~a~~aG~~ 140 (179)
T 3l8h_A 81 GVVDAIFMCPHGPDDGCACRKPLPGMYR-DIARRY--DVDLAGVPAVGDSLRDLQAAAQAGCA 140 (179)
T ss_dssp CCCCEEEEECCCTTSCCSSSTTSSHHHH-HHHHHH--TCCCTTCEEEESSHHHHHHHHHHTCE
T ss_pred CceeEEEEcCCCCCCCCCCCCCCHHHHH-HHHHHc--CCCHHHEEEECCCHHHHHHHHHCCCc
Confidence 656666532 21 234454443 233333 122122466788 6999999999995
No 10
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=98.44 E-value=8.4e-07 Score=84.36 Aligned_cols=117 Identities=10% Similarity=0.148 Sum_probs=81.9
Q ss_pred CeeEEEeeccceeccccc--cCCCcccchhHHHHHHHHHHCCCeEEEEecCCchh------------hHHHHHHHhhCCC
Q psy4654 377 TEVVVFSVDGSFTASVSV--TGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQ------------QGRVLSWLSQHNF 442 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~--~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~------------~~~T~~WL~qhgl 442 (559)
.|+|+||+||||+..... ...+..+.+|+.++++.|+++|+.+.++|+++... .+.++..|++.|+
T Consensus 25 ~k~v~~D~DGTL~~~~~~~~~~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 104 (211)
T 2gmw_A 25 VPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDV 104 (211)
T ss_dssp BCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEcCCCCeECCCCcccCcccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCC
Confidence 579999999999987521 11234578999999999999999999999998422 3566778888999
Q ss_pred CCceeEecC-------------C--CCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 443 PHGLVSFAD-------------G--LSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 443 P~G~L~lr~-------------g--~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
+++.++... . ..++|..++.. ++.+ .....=...+|| .+|+.+-+++|+..
T Consensus 105 ~f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~-~~~l--gi~~~~~~~VGD~~~Di~~a~~aG~~~ 171 (211)
T 2gmw_A 105 DLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSA-RDYL--HIDMAASYMVGDKLEDMQAAVAANVGT 171 (211)
T ss_dssp CCSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHH-HHHH--TBCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred ceEEEEECCcCCCCcccccCccCcCCCCCHHHHHHH-HHHc--CCCHHHEEEEcCCHHHHHHHHHCCCce
Confidence 876665431 1 13445444433 3444 222222356888 69999999999864
No 11
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=98.43 E-value=1.5e-06 Score=80.85 Aligned_cols=117 Identities=11% Similarity=0.146 Sum_probs=83.5
Q ss_pred CeeEEEeeccceecccc--------ccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--Cce
Q psy4654 377 TEVVVFSVDGSFTASVS--------VTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGL 446 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~--------~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~ 446 (559)
.++|+||+||||++... .......+.+|+.++++.|+++|+.+.++|+.+....+.++..|++.|+. ++.
T Consensus 3 ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~ 82 (189)
T 3ib6_A 3 LTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDF 82 (189)
T ss_dssp CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEE
T ss_pred ceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEE
Confidence 58999999999987432 12233468999999999999999999999999988778889999999984 445
Q ss_pred eEecCC-----C--CCChhhHHHHHHHHHhhccCCcEEEEeCC--ccchhHHHhcCCCC
Q psy4654 447 VSFADG-----L--SPGFLGHKASYLKSLIQDHGVVIHAAYGS--NKDVSVYTSVGLKP 496 (559)
Q Consensus 447 L~lr~g-----~--~~dp~~~K~~~L~~L~~~~~~~i~aafGN--~~DV~aYr~vGI~~ 496 (559)
++..+. . .++|+.++ .+++.+ .....=...+|| ..|+.+-+++|+..
T Consensus 83 i~~~~~~~~~~~~~KP~p~~~~-~~~~~~--~~~~~~~l~VGD~~~~Di~~A~~aG~~~ 138 (189)
T 3ib6_A 83 IYASNSELQPGKMEKPDKTIFD-FTLNAL--QIDKTEAVMVGNTFESDIIGANRAGIHA 138 (189)
T ss_dssp EEECCTTSSTTCCCTTSHHHHH-HHHHHH--TCCGGGEEEEESBTTTTHHHHHHTTCEE
T ss_pred EEEccccccccCCCCcCHHHHH-HHHHHc--CCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 555542 1 34554444 333444 222222345666 38999999999963
No 12
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=98.40 E-value=7.2e-07 Score=80.47 Aligned_cols=109 Identities=13% Similarity=0.131 Sum_probs=73.3
Q ss_pred CeeEEEeeccceeccccccCCC----cccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecCC
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRD----PKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFADG 452 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D----~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~g 452 (559)
.|+|+||+||||++++..+..+ ....+++.++++.++++|+.++++|+++.. .++.+|++.|+.. ++..
T Consensus 9 ~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~---~~~~~l~~~gl~~---~~~~- 81 (162)
T 2p9j_A 9 LKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQKMGITLAVISGRDSA---PLITRLKELGVEE---IYTG- 81 (162)
T ss_dssp CCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCH---HHHHHHHHTTCCE---EEEC-
T ss_pred eeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHHCCCEEEEEeCCCcH---HHHHHHHHcCCHh---hccC-
Confidence 5899999999999876432211 123577899999999999999999999854 4556777777752 2222
Q ss_pred CCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCC
Q psy4654 453 LSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 453 ~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
..++|..++. +++.+ .....-...+|| .+|+.+.+++|+.
T Consensus 82 ~kp~~~~~~~-~~~~~--~~~~~~~~~vGD~~~Di~~a~~ag~~ 122 (162)
T 2p9j_A 82 SYKKLEIYEK-IKEKY--SLKDEEIGFIGDDVVDIEVMKKVGFP 122 (162)
T ss_dssp C--CHHHHHH-HHHHT--TCCGGGEEEEECSGGGHHHHHHSSEE
T ss_pred CCCCHHHHHH-HHHHc--CCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 2344433322 23333 122233567888 7999999999985
No 13
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=98.39 E-value=6.9e-07 Score=82.86 Aligned_cols=107 Identities=16% Similarity=0.193 Sum_probs=73.9
Q ss_pred CeeEEEeeccceeccccccCCC----cccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecCC
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRD----PKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFADG 452 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D----~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~g 452 (559)
.|+|+||+||||+++...+..+ ....+...++++.++++|+.++++|+|+... ++..+++.++.. ++. +
T Consensus 8 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~---~~~~~~~lgl~~---~~~-~ 80 (180)
T 1k1e_A 8 IKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPI---LRRRIADLGIKL---FFL-G 80 (180)
T ss_dssp CCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHH---HHHHHHHHTCCE---EEE-S
T ss_pred CeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHH---HHHHHHHcCCce---eec-C
Confidence 4899999999999886543222 1245678899999999999999999998754 344566666653 222 2
Q ss_pred CCCChhhHHHHHHHHHhhccCC--cEEEEeCC-ccchhHHHhcCCC
Q psy4654 453 LSPGFLGHKASYLKSLIQDHGV--VIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 453 ~~~dp~~~K~~~L~~L~~~~~~--~i~aafGN-~~DV~aYr~vGI~ 495 (559)
..+ |...++.++...++ .-...+|| .+|+.+.+.+|+.
T Consensus 81 ~k~-----k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~ 121 (180)
T 1k1e_A 81 KLE-----KETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTS 121 (180)
T ss_dssp CSC-----HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE
T ss_pred CCC-----cHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe
Confidence 233 44444444332232 34678899 7999999999986
No 14
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=98.34 E-value=1.1e-06 Score=81.67 Aligned_cols=105 Identities=18% Similarity=0.249 Sum_probs=69.8
Q ss_pred CCeeEEEeeccceecccccc---CCCc---ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEe
Q psy4654 376 RTEVVVFSVDGSFTASVSVT---GRDP---KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSF 449 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~---g~D~---~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~l 449 (559)
..|+||||+||||++..... +... ....+. +++.++++|+.+.++|+++... ++..+++.|+. ++
T Consensus 11 ~~k~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~---~~~~~~~lgi~----~~ 81 (176)
T 3mmz_A 11 DIDAVVLDFDGTQTDDRVLIDSDGREFVSVHRGDGL--GIAALRKSGLTMLILSTEQNPV---VAARARKLKIP----VL 81 (176)
T ss_dssp GCSEEEECCTTTTSCSCCEECTTCCEEEEEEHHHHH--HHHHHHHTTCEEEEEESSCCHH---HHHHHHHHTCC----EE
T ss_pred cCCEEEEeCCCCcCcCCEeecCCccHhHhcccccHH--HHHHHHHCCCeEEEEECcChHH---HHHHHHHcCCe----eE
Confidence 35899999999999954322 1111 111222 6899999999999999998654 44566777887 33
Q ss_pred cCCCCCChhhHHHHHHHHHhhccC--CcEEEEeCC-ccchhHHHhcCCC
Q psy4654 450 ADGLSPGFLGHKASYLKSLIQDHG--VVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 450 r~g~~~dp~~~K~~~L~~L~~~~~--~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
... .+ |.+.++.+....+ ..-...+|| .+|+.+.+.+|+.
T Consensus 82 ~~~-~~-----k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~ 124 (176)
T 3mmz_A 82 HGI-DR-----KDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWP 124 (176)
T ss_dssp ESC-SC-----HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE
T ss_pred eCC-CC-----hHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCe
Confidence 322 23 5555555543323 223567999 7999999999965
No 15
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=98.33 E-value=9.5e-07 Score=82.73 Aligned_cols=90 Identities=11% Similarity=0.015 Sum_probs=60.5
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCCc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
+.+|+.++++.++++|+.+.++|+.+.. .++.+|++.++. ++.++..+. ..++|..++ .+++.+ .....
T Consensus 96 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~-~~~~~~--~~~~~ 169 (232)
T 1zrn_A 96 PFSEVPDSLRELKRRGLKLAILSNGSPQ---SIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYE-LAEQAL--GLDRS 169 (232)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHH-HHHHHH--TSCGG
T ss_pred CCccHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHhcChHhhhheEEEecccCCCCCCHHHHH-HHHHHc--CCCcc
Confidence 5689999999999999999999998643 456778887774 344554432 234453333 234444 22222
Q ss_pred EEEEeCC-ccchhHHHhcCCCC
Q psy4654 476 IHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 476 i~aafGN-~~DV~aYr~vGI~~ 496 (559)
=...+|| .+|+.+-+++|+..
T Consensus 170 ~~~~iGD~~~Di~~a~~aG~~~ 191 (232)
T 1zrn_A 170 AILFVASNAWDATGARYFGFPT 191 (232)
T ss_dssp GEEEEESCHHHHHHHHHHTCCE
T ss_pred cEEEEeCCHHHHHHHHHcCCEE
Confidence 2345677 79999999999964
No 16
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=98.30 E-value=1.3e-06 Score=75.34 Aligned_cols=107 Identities=8% Similarity=0.024 Sum_probs=70.1
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecC--
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFAD-- 451 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~-- 451 (559)
+.|+|+||+||||.++ ..+.+|+.++++.++++|+++.++|+++....+ .+|++.++. ++.++..+
T Consensus 1 ~~k~i~~D~DgtL~~~-------~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~---~~l~~~~l~~~f~~i~~~~~~ 70 (137)
T 2pr7_A 1 GMRGLIVDYAGVLDGT-------DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGA---APIRELETNGVVDKVLLSGEL 70 (137)
T ss_dssp CCCEEEECSTTTTSSC-------HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGG---HHHHHHHHTTSSSEEEEHHHH
T ss_pred CCcEEEEeccceecCC-------CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHH---HHHHHCChHhhccEEEEeccC
Confidence 3589999999999432 247899999999999999999999999876543 334444332 34455432
Q ss_pred -CCCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCC
Q psy4654 452 -GLSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 452 -g~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
...++|..++ .+++.+ .....=...+|| ..|+.+-+++|+.
T Consensus 71 ~~~Kp~~~~~~-~~~~~~--~~~~~~~~~vgD~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 71 GVEKPEEAAFQ-AAADAI--DLPMRDCVLVDDSILNVRGAVEAGLV 113 (137)
T ss_dssp SCCTTSHHHHH-HHHHHT--TCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred CCCCCCHHHHH-HHHHHc--CCCcccEEEEcCCHHHHHHHHHCCCE
Confidence 1234454433 234443 111112345777 6899999999993
No 17
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=98.29 E-value=7.6e-07 Score=82.72 Aligned_cols=119 Identities=13% Similarity=0.184 Sum_probs=79.6
Q ss_pred CCCeeEEEeeccceecccc-----ccCCCcccchhHHHHHHHHHHCCCeEEEEecCCch------------hhHHHHHHH
Q psy4654 375 PRTEVVVFSVDGSFTASVS-----VTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDM------------QQGRVLSWL 437 (559)
Q Consensus 375 ~~~k~VIfDIDGTlt~sd~-----~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~------------~~~~T~~WL 437 (559)
.+.|+|+||+||||+.... ....+..+.+|+.++++.|+++||.+.++|..+.. ....+...|
T Consensus 12 ~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l 91 (176)
T 2fpr_A 12 SSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF 91 (176)
T ss_dssp -CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHH
T ss_pred CcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHH
Confidence 3679999999999987732 12224567899999999999999999999997421 356677888
Q ss_pred hhCCCCCceeEec-----C-CC--CCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 438 SQHNFPHGLVSFA-----D-GL--SPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 438 ~qhglP~G~L~lr-----~-g~--~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
++.|++++.++.+ + .. .++|..+... ++.+ .....=...+|| ..|+.+-+++|+..
T Consensus 92 ~~~gl~fd~v~~s~~~~~~~~~~~KP~p~~~~~~-~~~~--gi~~~~~l~VGD~~~Di~~A~~aG~~~ 156 (176)
T 2fpr_A 92 TSQGVQFDEVLICPHLPADECDCRKPKVKLVERY-LAEQ--AMDRANSYVIGDRATDIQLAENMGING 156 (176)
T ss_dssp HHTTCCEEEEEEECCCGGGCCSSSTTSCGGGGGG-C------CCGGGCEEEESSHHHHHHHHHHTSEE
T ss_pred HHcCCCeeEEEEcCCCCcccccccCCCHHHHHHH-HHHc--CCCHHHEEEEcCCHHHHHHHHHcCCeE
Confidence 9999987777654 2 22 3345444332 2322 111111234566 78999999999974
No 18
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=98.26 E-value=5e-07 Score=86.84 Aligned_cols=114 Identities=19% Similarity=0.289 Sum_probs=76.1
Q ss_pred CCeeEEEeeccceecccccc-------CC---------------------CcccchhHHHHHHHHHHCCCeEEEEecCCc
Q psy4654 376 RTEVVVFSVDGSFTASVSVT-------GR---------------------DPKVRAGAVDIVRHWQELGYLIIYITGRPD 427 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~-------g~---------------------D~~~~~GA~elv~~l~~~GY~IIYLTaRp~ 427 (559)
..|+|+||+||||.++.... .. -..+.+|+.++++.++++|+++.++|+++.
T Consensus 36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~~~ 115 (211)
T 2b82_A 36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSP 115 (211)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCC
T ss_pred CCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCCcH
Confidence 36999999999999975310 00 012467999999999999999999999987
Q ss_pred hhhHHHHHHHhhC-CCC-Cce-eEecCCCCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 428 MQQGRVLSWLSQH-NFP-HGL-VSFADGLSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 428 ~~~~~T~~WL~qh-glP-~G~-L~lr~g~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
.+.+.+.++|.++ .+. .+. ....++..++|+.+ ..+++.+ ++ ...+|| ..|+.+-+++|+..
T Consensus 116 ~~~~~~l~~l~~~f~~i~~~~~~~~~~~~KP~p~~~-~~~~~~~----g~--~l~VGDs~~Di~aA~~aG~~~ 181 (211)
T 2b82_A 116 TKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTK-SQWLQDK----NI--RIFYGDSDNDITAARDVGARG 181 (211)
T ss_dssp CSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCS-HHHHHHT----TE--EEEEESSHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHhcCccccccchhhhcCCCCCHHHH-HHHHHHC----CC--EEEEECCHHHHHHHHHCCCeE
Confidence 7665555556542 222 111 00112234556443 3445555 43 677899 69999999999964
No 19
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=98.25 E-value=4.5e-06 Score=78.45 Aligned_cols=100 Identities=17% Similarity=0.134 Sum_probs=68.3
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCc---eeEecCC-----CC-CCh-hhHHHHHHHHHh
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHG---LVSFADG-----LS-PGF-LGHKASYLKSLI 469 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G---~L~lr~g-----~~-~dp-~~~K~~~L~~L~ 469 (559)
.+.+|+.++++.++++|+.+.++|+.+. ..++.++++.|++.- .+...++ .. ..+ ..-|...++.++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~ 168 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNS---FVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWL 168 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHH
Confidence 4589999999999999999999999864 456677888887621 0111111 00 111 135777777765
Q ss_pred hccC---C--cEEEEeCC-ccchhHHHhcCCCCCcEEEEcCCC
Q psy4654 470 QDHG---V--VIHAAYGS-NKDVSVYTSVGLKPRSIYIVGKVS 506 (559)
Q Consensus 470 ~~~~---~--~i~aafGN-~~DV~aYr~vGI~~~~If~i~~~~ 506 (559)
...+ + .-...+|| .+|+.+.+.+|++ +.+++..
T Consensus 169 ~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~----~~~~~~~ 207 (232)
T 3fvv_A 169 AGMGLALGDFAESYFYSDSVNDVPLLEAVTRP----IAANPSP 207 (232)
T ss_dssp HHTTCCGGGSSEEEEEECCGGGHHHHHHSSEE----EEESCCH
T ss_pred HHcCCCcCchhheEEEeCCHhhHHHHHhCCCe----EEECcCH
Confidence 5444 3 34778999 7999999999966 4677753
No 20
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=98.22 E-value=2.7e-06 Score=79.78 Aligned_cols=92 Identities=20% Similarity=0.159 Sum_probs=62.1
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeE------------ecC-CCCCC-hhhHHHHHH
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVS------------FAD-GLSPG-FLGHKASYL 465 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~------------lr~-g~~~d-p~~~K~~~L 465 (559)
++.+|+.++++.++++|+.+.++|+.+. ..++.+|++.|++.+.++ ... ..... ...-|-+.+
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~---~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~ 162 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFR---SIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVI 162 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChH---HHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHH
Confidence 4689999999999999999999999864 455778888898742222 111 11000 001355555
Q ss_pred HHHhhccCCcEEEEeCC-ccchhHHHhcCC
Q psy4654 466 KSLIQDHGVVIHAAYGS-NKDVSVYTSVGL 494 (559)
Q Consensus 466 ~~L~~~~~~~i~aafGN-~~DV~aYr~vGI 494 (559)
+.+....++.-...+|| ..|+.+.+++|+
T Consensus 163 ~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~ 192 (225)
T 1nnl_A 163 KLLKEKFHFKKIIMIGDGATDMEACPPADA 192 (225)
T ss_dssp HHHHHHHCCSCEEEEESSHHHHTTTTTSSE
T ss_pred HHHHHHcCCCcEEEEeCcHHhHHHHHhCCe
Confidence 55544334344678899 699999999998
No 21
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=98.21 E-value=3.8e-06 Score=79.39 Aligned_cols=90 Identities=13% Similarity=0.078 Sum_probs=60.0
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCCc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
+.+|+.++++.++++|+.+.++|+.+.. .++.+|++.|+. ++.++..+. ..++|..++ .+++.+ .....
T Consensus 106 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~-~~~~~~--~~~~~ 179 (240)
T 2no4_A 106 AYPDAAETLEKLKSAGYIVAILSNGNDE---MLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQ-FACDRL--GVNPN 179 (240)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHH-HHHHHH--TCCGG
T ss_pred CCCCHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHH-HHHHHc--CCCcc
Confidence 4589999999999999999999998643 456777777775 344555432 234453333 234444 22222
Q ss_pred EEEEeCC-ccchhHHHhcCCCC
Q psy4654 476 IHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 476 i~aafGN-~~DV~aYr~vGI~~ 496 (559)
=...+|| ..|+.+-+++|+..
T Consensus 180 ~~~~iGD~~~Di~~a~~aG~~~ 201 (240)
T 2no4_A 180 EVCFVSSNAWDLGGAGKFGFNT 201 (240)
T ss_dssp GEEEEESCHHHHHHHHHHTCEE
T ss_pred cEEEEeCCHHHHHHHHHCCCEE
Confidence 2345677 79999999999863
No 22
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=98.19 E-value=3.1e-06 Score=78.21 Aligned_cols=96 Identities=15% Similarity=0.166 Sum_probs=63.9
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCC--ceeEec----------C-CCCCChhhHHHHHHH
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPH--GLVSFA----------D-GLSPGFLGHKASYLK 466 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~--G~L~lr----------~-g~~~dp~~~K~~~L~ 466 (559)
++.+|+.++++.++++|+.+..+|+.+. ..++.+|++.|+.. +.++.. + ..... -|...++
T Consensus 75 ~~~~~~~~~l~~l~~~g~~~~i~S~~~~---~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k---~k~~~~~ 148 (217)
T 3m1y_A 75 PLFEGALELVSALKEKNYKVVCFSGGFD---LATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSH---SKGEMLL 148 (217)
T ss_dssp CBCBTHHHHHHHHHTTTEEEEEEEEEEH---HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTT---HHHHHHH
T ss_pred cCCCCHHHHHHHHHHCCCEEEEEcCCch---hHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCC---ChHHHHH
Confidence 4789999999999999999999998654 44566777777752 333211 1 11122 3555565
Q ss_pred HHhhccCC--cEEEEeCC-ccchhHHHhcCCCCCcEEEEcCC
Q psy4654 467 SLIQDHGV--VIHAAYGS-NKDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 467 ~L~~~~~~--~i~aafGN-~~DV~aYr~vGI~~~~If~i~~~ 505 (559)
.+.+..++ .=...+|| .+|+.+.+++|+.. .+|+.
T Consensus 149 ~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~----~~~~~ 186 (217)
T 3m1y_A 149 VLQRLLNISKTNTLVVGDGANDLSMFKHAHIKI----AFNAK 186 (217)
T ss_dssp HHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEE----EESCC
T ss_pred HHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeE----EECcc
Confidence 55443333 23568889 79999999999963 44654
No 23
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=98.19 E-value=3.1e-06 Score=80.23 Aligned_cols=111 Identities=12% Similarity=0.082 Sum_probs=72.7
Q ss_pred CCeeEEEeeccceeccccccC-------CCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeE
Q psy4654 376 RTEVVVFSVDGSFTASVSVTG-------RDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVS 448 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g-------~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~ 448 (559)
..|+|+||+||||.+...... ....+.+||.++++.|+++||.+..+|+.+..+. ...+. .-++.++
T Consensus 5 ~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~---~~~~~---~~~d~v~ 78 (196)
T 2oda_A 5 TFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALS---TPLAA---PVNDWMI 78 (196)
T ss_dssp CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHH---HHHHT---TTTTTCE
T ss_pred cCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHH---HHhcC---ccCCEEE
Confidence 458999999999987332111 1224689999999999999999999999887655 22232 2234455
Q ss_pred ecCC---CCCChhhHHHHHHHHHhhccCC-cEEEEeCC-ccchhHHHhcCCC
Q psy4654 449 FADG---LSPGFLGHKASYLKSLIQDHGV-VIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 449 lr~g---~~~dp~~~K~~~L~~L~~~~~~-~i~aafGN-~~DV~aYr~vGI~ 495 (559)
..+. ..++|+.+... ++.+ ...- .=...+|| ..||.+-+++|+.
T Consensus 79 ~~~~~~~~KP~p~~~~~a-~~~l--~~~~~~~~v~VGDs~~Di~aA~~aG~~ 127 (196)
T 2oda_A 79 AAPRPTAGWPQPDACWMA-LMAL--NVSQLEGCVLISGDPRLLQSGLNAGLW 127 (196)
T ss_dssp ECCCCSSCTTSTHHHHHH-HHHT--TCSCSTTCEEEESCHHHHHHHHHHTCE
T ss_pred ECCcCCCCCCChHHHHHH-HHHc--CCCCCccEEEEeCCHHHHHHHHHCCCE
Confidence 4432 24456554433 3443 1111 11456788 6899999999995
No 24
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=98.17 E-value=5.2e-06 Score=78.85 Aligned_cols=119 Identities=16% Similarity=0.176 Sum_probs=80.8
Q ss_pred CCCeeEEEeeccceeccccc--cCCCcccchhHHHHHHHHHHCCCeEEEEecCCchh------------hHHHHHHHhhC
Q psy4654 375 PRTEVVVFSVDGSFTASVSV--TGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQ------------QGRVLSWLSQH 440 (559)
Q Consensus 375 ~~~k~VIfDIDGTlt~sd~~--~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~------------~~~T~~WL~qh 440 (559)
...++++||+||||.+.... -..+..+.+|+.++++.|+++|+.++++|+++... .+.++..|++.
T Consensus 29 ~~~k~i~~D~DGtl~~~~~y~~~~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 108 (218)
T 2o2x_A 29 PHLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREE 108 (218)
T ss_dssp SSCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHT
T ss_pred hcCCEEEEeCCCCcCCCCcccCCcccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHc
Confidence 35689999999999876421 11234578999999999999999999999998621 14667778888
Q ss_pred CCCCceeEecC-------------CC--CCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 441 NFPHGLVSFAD-------------GL--SPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 441 glP~G~L~lr~-------------g~--~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
|++.+.++... .. .++|..++. +++.+ .....=...+|| .+|+.+-+++|+..
T Consensus 109 gl~~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~-~~~~~--~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 109 GVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVE-AGKRL--ALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp TCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHH-HHHHH--TCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred CCceeeEEEeecCCCCceeecccCCccCCCCHHHHHH-HHHHc--CCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 98766554331 11 234444443 23333 111122357888 69999999999974
No 25
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=98.16 E-value=4e-06 Score=80.14 Aligned_cols=90 Identities=19% Similarity=0.087 Sum_probs=65.3
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCC-CCceeEecCC-----------CCCChh-hH------
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNF-PHGLVSFADG-----------LSPGFL-GH------ 460 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhgl-P~G~L~lr~g-----------~~~dp~-~~------ 460 (559)
.+.+|+.++++.++++|+.+.++|+.+. ..++.+|+ ++ +++.++..+. ..++|. .+
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~---~~~~~~l~--~l~~~~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~ 151 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMD---FFVYPLLE--GIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC 151 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEH---HHHHHHHT--TTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcH---HHHHHHHh--cCCCCCeEEeeeeEEcCCceEEecCCCCccccccccCCc
Confidence 4689999999999999999999999875 44566666 65 5655554321 234444 12
Q ss_pred HHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 461 KASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 461 K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
|..+++.+ .....-...+|| ..|+.+.+++|+..
T Consensus 152 K~~~~~~~--~~~~~~~~~vGDs~~Di~~a~~aG~~~ 186 (236)
T 2fea_A 152 KPSVIHEL--SEPNQYIIMIGDSVTDVEAAKLSDLCF 186 (236)
T ss_dssp HHHHHHHH--CCTTCEEEEEECCGGGHHHHHTCSEEE
T ss_pred HHHHHHHH--hccCCeEEEEeCChHHHHHHHhCCeee
Confidence 66788887 334445678899 79999999999864
No 26
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=98.15 E-value=7e-06 Score=76.44 Aligned_cols=119 Identities=9% Similarity=0.045 Sum_probs=72.8
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~ 474 (559)
.+.+|+.++++.++++|+.+.++|+.+. ......|++.++. ++.++..+. ..++|..++ .+++.+ ....
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~-~~~~~~--~~~~ 172 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNP---QMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYA-LAPRAF--GVPA 172 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCH---HHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHT-HHHHHH--TSCG
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCH---HHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHH-HHHHHh--CCCc
Confidence 3578999999999999999999998765 3445567777765 444554432 233443332 234444 2222
Q ss_pred cEEEEeCC-ccchhHHHhcCCCCCcEEEEcCCC---ccccccceecchhHHHHHHHHh
Q psy4654 475 VIHAAYGS-NKDVSVYTSVGLKPRSIYIVGKVS---KKHQSQATVLSDGYAAHLTALQ 528 (559)
Q Consensus 475 ~i~aafGN-~~DV~aYr~vGI~~~~If~i~~~~---~~~~~~~~~~~~~Y~~hL~~l~ 528 (559)
.=...+|| .+|+.+-+++|+. +..|+..+ ......+....++..+ |.++.
T Consensus 173 ~~~~~vGD~~~Di~~a~~~G~~---~~~v~~~~~~~~~~~~~~~~v~~~~~e-l~~~l 226 (233)
T 3umb_A 173 AQILFVSSNGWDACGATWHGFT---TFWINRLGHPPEALDVAPAAAGHDMRD-LLQFV 226 (233)
T ss_dssp GGEEEEESCHHHHHHHHHHTCE---EEEECTTCCCCCSSSCCCSEEESSHHH-HHHHH
T ss_pred ccEEEEeCCHHHHHHHHHcCCE---EEEEcCCCCCchhccCCCCEEECCHHH-HHHHH
Confidence 22456688 7999999999996 34444432 2222234556777754 44443
No 27
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=98.15 E-value=6.8e-06 Score=78.42 Aligned_cols=91 Identities=12% Similarity=-0.022 Sum_probs=60.5
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecCCC---CCChhhHHHHHHHHHhhccCCcE
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFADGL---SPGFLGHKASYLKSLIQDHGVVI 476 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~g~---~~dp~~~K~~~L~~L~~~~~~~i 476 (559)
.+.+|+.++++.++++|+.+.++|+.+....+...+.+.-.++.++.++..+.. .++|..++ .+++.+ ++..
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~-~~~~~l----gi~~ 185 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMAL-KVALEL----EVGH 185 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHH-HHHHHH----TCSC
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHH-HHHHHc----CCCC
Confidence 467899999999999999999999988655555544444344434555544321 33443332 223333 4433
Q ss_pred ---EEEeCC-ccchhHHHhcCCC
Q psy4654 477 ---HAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 477 ---~aafGN-~~DV~aYr~vGI~ 495 (559)
...+|| .+|+.+-+++|+.
T Consensus 186 ~~~~i~vGD~~~Di~~a~~aG~~ 208 (277)
T 3iru_A 186 VNGCIKVDDTLPGIEEGLRAGMW 208 (277)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCE
T ss_pred CccEEEEcCCHHHHHHHHHCCCe
Confidence 578899 7999999999994
No 28
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=98.14 E-value=9.3e-06 Score=75.02 Aligned_cols=89 Identities=16% Similarity=0.123 Sum_probs=66.6
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCC---ceeEecCCC------CCChhhHHHHHHHHHhh
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPH---GLVSFADGL------SPGFLGHKASYLKSLIQ 470 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~---G~L~lr~g~------~~dp~~~K~~~L~~L~~ 470 (559)
.+.+|+.++++.++++ +.+.++|+.+. ..++.+|++.|+.. +.+...+.. .++| ..|..+++.+..
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~---~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p-~~~~~~l~~l~~ 143 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFY---EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQK-DPKRQSVIAFKS 143 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEH---HHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSS-SHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChH---HHHHHHHHHcCCcceecceeEEcCCceEEeeecCCC-chHHHHHHHHHh
Confidence 4689999999999999 99999998754 46678888888874 334443221 2667 678888888732
Q ss_pred ccCCcEEEEeCC-ccchhHHHhcCCC
Q psy4654 471 DHGVVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 471 ~~~~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
...=...+|| .+|+.+.+++|+.
T Consensus 144 --~~~~~~~iGD~~~Di~~a~~aG~~ 167 (206)
T 1rku_A 144 --LYYRVIAAGDSYNDTTMLSEAHAG 167 (206)
T ss_dssp --TTCEEEEEECSSTTHHHHHHSSEE
T ss_pred --cCCEEEEEeCChhhHHHHHhcCcc
Confidence 2334678899 7999999999995
No 29
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=98.11 E-value=4.5e-06 Score=78.00 Aligned_cols=98 Identities=13% Similarity=0.152 Sum_probs=65.1
Q ss_pred cccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccC
Q psy4654 399 PKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHG 473 (559)
Q Consensus 399 ~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~ 473 (559)
..+.+|+.++++.++++|+.+.++|+.+. ..+..+|++.|+. ++.++..+. ..++|..++ .+++.+ ...
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~---~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~-~~~~~l--gi~ 175 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNG---ERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVL-AALTNI--NIE 175 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHH-HHHHHH--TCC
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCH---HHHHHHHHHCCchhheeeEEcccccCCCCCChHHHH-HHHHHc--CCC
Confidence 35789999999999999999999998754 4556677887775 455555432 133443333 233444 222
Q ss_pred Cc-EEEEeCC-ccchhHHHhcCCCCCcEEEEcCC
Q psy4654 474 VV-IHAAYGS-NKDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 474 ~~-i~aafGN-~~DV~aYr~vGI~~~~If~i~~~ 505 (559)
.. =...+|| .+|+.+-+++|+.. ..++..
T Consensus 176 ~~~~~v~vGD~~~Di~~a~~aG~~~---v~~~~~ 206 (231)
T 3kzx_A 176 PSKEVFFIGDSISDIQSAIEAGCLP---IKYGST 206 (231)
T ss_dssp CSTTEEEEESSHHHHHHHHHTTCEE---EEECC-
T ss_pred cccCEEEEcCCHHHHHHHHHCCCeE---EEECCC
Confidence 22 2467899 79999999999743 455654
No 30
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=98.11 E-value=6.6e-06 Score=74.76 Aligned_cols=92 Identities=15% Similarity=0.144 Sum_probs=61.9
Q ss_pred cccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccC
Q psy4654 399 PKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHG 473 (559)
Q Consensus 399 ~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~ 473 (559)
..+.+|+.++++.++++|+.+.++|+.+. ..++..|++.++. ++.++..+. ..++|..++ .+++.+ ...
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~-~~~~~~--~~~ 156 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATSTPQ---REALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYL-LVLERL--NVV 156 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCH---HHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHH-HHHHHH--TCC
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeCCcH---HhHHHHHHhcChHHhcCEEeecccCCCCCcCcHHHH-HHHHHc--CCC
Confidence 34678999999999999999999998754 4556677777775 445555432 133443322 233333 122
Q ss_pred CcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 474 VVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 474 ~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
..=...+|| .+|+.+.+++|+..
T Consensus 157 ~~~~i~iGD~~~Di~~a~~aG~~~ 180 (216)
T 2pib_A 157 PEKVVVFEDSKSGVEAAKSAGIER 180 (216)
T ss_dssp GGGEEEEECSHHHHHHHHHTTCCE
T ss_pred CceEEEEeCcHHHHHHHHHcCCcE
Confidence 222567899 79999999999954
No 31
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=98.11 E-value=9.5e-06 Score=75.32 Aligned_cols=120 Identities=10% Similarity=0.018 Sum_probs=72.5
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC-C--CCChhhHHHHHHHHHhhccCC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG-L--SPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g-~--~~dp~~~K~~~L~~L~~~~~~ 474 (559)
.+.+|+.++++.++ +|+.+.++|..+... ....|++.++. ++.++..+. . .++|..++ .+++.+ ....
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~---~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~-~~~~~l--gi~~ 179 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFREL---QSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFH-FALSAT--QSEL 179 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHH---HHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHH-HHHHHT--TCCG
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHH---HHHHHHHcChHhhceeEEEeccCCCCCCCHHHHH-HHHHHc--CCCc
Confidence 46789999999999 999999999976543 34455555553 344554432 1 23332222 223333 2222
Q ss_pred cEEEEeCC-c-cchhHHHhcCCCCCcEEEEcCCCc-cccccceecchhHHHHHHHHhhc
Q psy4654 475 VIHAAYGS-N-KDVSVYTSVGLKPRSIYIVGKVSK-KHQSQATVLSDGYAAHLTALQQH 530 (559)
Q Consensus 475 ~i~aafGN-~-~DV~aYr~vGI~~~~If~i~~~~~-~~~~~~~~~~~~Y~~hL~~l~~~ 530 (559)
.=...+|| . +|+.+-+++|+. +..++.... .....+....++..+ |..+..+
T Consensus 180 ~~~~~iGD~~~~Di~~a~~aG~~---~~~~~~~~~~~~~~~~d~vi~sl~e-~~~~~~~ 234 (240)
T 3qnm_A 180 RESLMIGDSWEADITGAHGVGMH---QAFYNVTERTVFPFQPTYHIHSLKE-LMNLLEG 234 (240)
T ss_dssp GGEEEEESCTTTTHHHHHHTTCE---EEEECCSCCCCCSSCCSEEESSTHH-HHHHTC-
T ss_pred ccEEEECCCchHhHHHHHHcCCe---EEEEcCCCCCCcCCCCceEECCHHH-HHHHHhc
Confidence 34577888 5 899999999994 556676542 233345566777654 4444444
No 32
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=98.09 E-value=1.1e-05 Score=85.39 Aligned_cols=119 Identities=18% Similarity=0.217 Sum_probs=80.5
Q ss_pred CCeeEEEeeccceecccc-----ccCCCcc-cchhHHHHHHHHHHCCCeEEEEecCC---------chhhHHHHHHHhhC
Q psy4654 376 RTEVVVFSVDGSFTASVS-----VTGRDPK-VRAGAVDIVRHWQELGYLIIYITGRP---------DMQQGRVLSWLSQH 440 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~-----~~g~D~~-~~~GA~elv~~l~~~GY~IIYLTaRp---------~~~~~~T~~WL~qh 440 (559)
..|+|+||+||||.+... ....|+. +.+||.++++.|+++||.|.++|.++ ......+...|++.
T Consensus 57 ~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~l 136 (416)
T 3zvl_A 57 QGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKL 136 (416)
T ss_dssp CSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHc
Confidence 569999999999987652 1334443 68999999999999999999999976 23344577888889
Q ss_pred CCCCceeEecCC-C--CCChhhHHHHHHHHHhh--ccCCcEEEEeCC-c-----------------cchhHHHhcCCC
Q psy4654 441 NFPHGLVSFADG-L--SPGFLGHKASYLKSLIQ--DHGVVIHAAYGS-N-----------------KDVSVYTSVGLK 495 (559)
Q Consensus 441 glP~G~L~lr~g-~--~~dp~~~K~~~L~~L~~--~~~~~i~aafGN-~-----------------~DV~aYr~vGI~ 495 (559)
|++.+.++..+. . .++|..+.. +++.+-. .....=....|| . .|+.+-+++||.
T Consensus 137 gl~fd~i~~~~~~~~~KP~p~~~~~-a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~ 213 (416)
T 3zvl_A 137 GVPFQVLVATHAGLNRKPVSGMWDH-LQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLP 213 (416)
T ss_dssp TSCCEEEEECSSSTTSTTSSHHHHH-HHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCC
T ss_pred CCCEEEEEECCCCCCCCCCHHHHHH-HHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCc
Confidence 998877766543 2 345544443 3333300 011111234555 3 699999999986
No 33
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=98.07 E-value=6.3e-06 Score=77.13 Aligned_cols=103 Identities=19% Similarity=0.214 Sum_probs=70.4
Q ss_pred CCeeEEEeeccceeccccccCCCc---c---cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhh--CCCCCcee
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDP---K---VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQ--HNFPHGLV 447 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~---~---~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~q--hglP~G~L 447 (559)
+.|.||||+|||||+....+..+- + ++.+ ..++.|+++|+++..+|++ . .++..|++ .++. +
T Consensus 8 ~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~--~~L~~Lk~~Gi~~~I~Tg~-~----~~~~~l~~l~lgi~---~ 77 (168)
T 3ewi_A 8 EIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDA--IGISLLKKSGIEVRLISER-A----CSKQTLSALKLDCK---T 77 (168)
T ss_dssp CCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHH--HHHHHHHHTTCEEEEECSS-C----CCHHHHHTTCCCCC---E
T ss_pred cCcEEEEeCccceECCcEEEcCCCCEEEEEecCcH--HHHHHHHHCCCEEEEEeCc-H----HHHHHHHHhCCCcE---E
Confidence 568999999999999875433321 0 1222 3589999999999999999 3 34455663 3553 3
Q ss_pred EecCCCCCChhhHHHHHHHHHhhccCC--cEEEEeCC-ccchhHHHhcCCC
Q psy4654 448 SFADGLSPGFLGHKASYLKSLIQDHGV--VIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 448 ~lr~g~~~dp~~~K~~~L~~L~~~~~~--~i~aafGN-~~DV~aYr~vGI~ 495 (559)
+ .+ .. .|...++.++...++ .-...+|| .+|+.+.+.+|++
T Consensus 78 ~-~g-~~-----~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~ 121 (168)
T 3ewi_A 78 E-VS-VS-----DKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLS 121 (168)
T ss_dssp E-CS-CS-----CHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEE
T ss_pred E-EC-CC-----ChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCE
Confidence 3 22 12 266777776554343 34678999 7999999999987
No 34
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=98.05 E-value=1e-05 Score=77.33 Aligned_cols=128 Identities=13% Similarity=-0.041 Sum_probs=77.3
Q ss_pred cccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--Cce-eEecCC----CCCChhhHHHHHHHHHhhc
Q psy4654 399 PKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGL-VSFADG----LSPGFLGHKASYLKSLIQD 471 (559)
Q Consensus 399 ~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~-L~lr~g----~~~dp~~~K~~~L~~L~~~ 471 (559)
..+.+|+.++++.++++|+.+.++|+.+.. .++..|++.++. ++. ++..+. ..++|..++ .+++.+ .
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~-~~~~~l--g 182 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERG---RLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYT-FAAQQL--G 182 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHH---HHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHH-HHHHHT--T
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHH-HHHHHc--C
Confidence 356889999999999999999999987643 455667777764 334 444321 123343332 223333 2
Q ss_pred cCCcEEEEeCC-ccchhHHHhcCCCCCcEEEEcCCCc--------cccccceecchhHHHHHHHHhhcCCCCC
Q psy4654 472 HGVVIHAAYGS-NKDVSVYTSVGLKPRSIYIVGKVSK--------KHQSQATVLSDGYAAHLTALQQHGGSRP 535 (559)
Q Consensus 472 ~~~~i~aafGN-~~DV~aYr~vGI~~~~If~i~~~~~--------~~~~~~~~~~~~Y~~hL~~l~~~~~~~~ 535 (559)
....=...+|| .+|+.+.+++|+. .+.|+.... .....+....++..+=+..|......+|
T Consensus 183 i~~~~~i~iGD~~~Di~~a~~aG~~---~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~~~~~~~ 252 (259)
T 4eek_A 183 ILPERCVVIEDSVTGGAAGLAAGAT---LWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAEAGLLTP 252 (259)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCE---EEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHHTTSSCC
T ss_pred CCHHHEEEEcCCHHHHHHHHHCCCE---EEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHHhcccccc
Confidence 22233578999 6999999999995 345553211 1112344667777654455555444444
No 35
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=98.05 E-value=6.2e-06 Score=76.47 Aligned_cols=119 Identities=13% Similarity=0.100 Sum_probs=74.2
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCCC-CCChhhHHHHHHHHHhhccCC--
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADGL-SPGFLGHKASYLKSLIQDHGV-- 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g~-~~dp~~~K~~~L~~L~~~~~~-- 474 (559)
.+.+|+.++++.++++|+.+.++|+.+. ..+...|++.++. ++.++..+.. ..+| |...++.++...++
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp---~~~~~~~~~~~lgi~~ 159 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPT---VFSKQILEHFKLAFYFDAIVGSSLDGKLST---KEDVIRYAMESLNIKS 159 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEH---HHHHHHHHHTTCGGGCSEEEEECTTSSSCS---HHHHHHHHHHHHTCCG
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHHhCCHhheeeeeccCCCCCCCC---CHHHHHHHHHHhCcCc
Confidence 4678999999999999999999998653 4566677777775 4455554422 2223 33444443332233
Q ss_pred cEEEEeCC-ccchhHHHhcCCCCCcEEEEcC-CC--ccc-cccceecchhHHHHHHHHh
Q psy4654 475 VIHAAYGS-NKDVSVYTSVGLKPRSIYIVGK-VS--KKH-QSQATVLSDGYAAHLTALQ 528 (559)
Q Consensus 475 ~i~aafGN-~~DV~aYr~vGI~~~~If~i~~-~~--~~~-~~~~~~~~~~Y~~hL~~l~ 528 (559)
.=...+|| .+|+.+-+++|+.. .-|.. .+ ... ...+....++..+ |.++.
T Consensus 160 ~~~i~iGD~~~Di~~a~~aG~~~---i~v~~g~~~~~~~~~~~ad~v~~s~~e-l~~~~ 214 (226)
T 3mc1_A 160 DDAIMIGDREYDVIGALKNNLPS---IGVTYGFGSYEELKNAGANYIVNSVDE-LHKKI 214 (226)
T ss_dssp GGEEEEESSHHHHHHHHTTTCCE---EEESSSSSCHHHHHHHTCSEEESSHHH-HHHHH
T ss_pred ccEEEECCCHHHHHHHHHCCCCE---EEEccCCCCHHHHHHcCCCEEECCHHH-HHHHH
Confidence 24577899 79999999999953 33431 11 111 2344566777654 44443
No 36
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=98.05 E-value=5.4e-06 Score=75.24 Aligned_cols=96 Identities=9% Similarity=0.110 Sum_probs=64.9
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~ 474 (559)
.+.+|+.++++.++++|+.+.++|+.+. ..++..|++.++. ++.++..+. ..++|..++ .+++.+ ....
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~-~~~~~~--~~~~ 162 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVK---ADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYL-TALKQL--NVQA 162 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHH-HHHHHH--TCCG
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcH---HHHHHHHHHcCcHhheeeEeecccccCCCCChHHHH-HHHHHc--CCCh
Confidence 4678999999999999999999998854 4456677777774 455555432 133443332 233333 2222
Q ss_pred cEEEEeCC-ccchhHHHhcCCCCCcEEEEcC
Q psy4654 475 VIHAAYGS-NKDVSVYTSVGLKPRSIYIVGK 504 (559)
Q Consensus 475 ~i~aafGN-~~DV~aYr~vGI~~~~If~i~~ 504 (559)
.=...+|| .+|+.+-+++|+ .+..++.
T Consensus 163 ~~~~~iGD~~~Di~~a~~aG~---~~~~~~~ 190 (214)
T 3e58_A 163 SRALIIEDSEKGIAAGVAADV---EVWAIRD 190 (214)
T ss_dssp GGEEEEECSHHHHHHHHHTTC---EEEEECC
T ss_pred HHeEEEeccHhhHHHHHHCCC---EEEEECC
Confidence 22567999 799999999999 4556665
No 37
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=98.04 E-value=1.5e-05 Score=77.67 Aligned_cols=102 Identities=13% Similarity=0.188 Sum_probs=71.4
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCC--ceeEecCCCC
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPH--GLVSFADGLS 454 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~--G~L~lr~g~~ 454 (559)
.|+|+|||||||.+.+. ..+++.+.++.++++|+.++++|+|+........++|.+.|++. +.++...+
T Consensus 1 ik~i~~D~DGtL~~~~~-------~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~-- 71 (263)
T 1zjj_A 1 MVAIIFDMDGVLYRGNR-------AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGL-- 71 (263)
T ss_dssp CEEEEEECBTTTEETTE-------ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHH--
T ss_pred CeEEEEeCcCceEeCCE-------eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHH--
Confidence 37899999999997532 23678999999999999999999999988888999999888863 34444321
Q ss_pred CChhhHHHHHHHHHhhccCCcEEEEeCCccchhHHHhcCCC
Q psy4654 455 PGFLGHKASYLKSLIQDHGVVIHAAYGSNKDVSVYTSVGLK 495 (559)
Q Consensus 455 ~dp~~~K~~~L~~L~~~~~~~i~aafGN~~DV~aYr~vGI~ 495 (559)
--+.+++.... +..++ ..|........++.|++
T Consensus 72 -----~~~~~l~~~~~--~~~v~-viG~~~l~~~l~~~G~~ 104 (263)
T 1zjj_A 72 -----ATRLYMSKHLD--PGKIF-VIGGEGLVKEMQALGWG 104 (263)
T ss_dssp -----HHHHHHHHHSC--CCCEE-EESCHHHHHHHHHHTSC
T ss_pred -----HHHHHHHHhCC--CCEEE-EEcCHHHHHHHHHcCCe
Confidence 22334444321 22233 35665556666777774
No 38
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=98.03 E-value=2.8e-05 Score=74.78 Aligned_cols=82 Identities=20% Similarity=0.288 Sum_probs=59.6
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhccCCcEEEE
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQDHGVVIHAA 479 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~~i~aa 479 (559)
.+.+|+.++++.++++|+.+..+|+++... ++..+++.|+..- +.... . ..|...++.+... .. ...
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~---~~~~~~~~gl~~~---f~~~~-~---~~k~~~~k~~~~~--~~-~~~ 210 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFV---AKWVAEELGLDDY---FAEVL-P---HEKAEKVKEVQQK--YV-TAM 210 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHHTCSEE---ECSCC-G---GGHHHHHHHHHTT--SC-EEE
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHHHcCChhH---hHhcC-H---HHHHHHHHHHHhc--CC-EEE
Confidence 467999999999999999999999987644 4456666676421 22111 1 2588888887432 22 378
Q ss_pred eCC-ccchhHHHhcCC
Q psy4654 480 YGS-NKDVSVYTSVGL 494 (559)
Q Consensus 480 fGN-~~DV~aYr~vGI 494 (559)
+|| .+|+.+.+++|+
T Consensus 211 vGD~~nDi~~~~~Ag~ 226 (280)
T 3skx_A 211 VGDGVNDAPALAQADV 226 (280)
T ss_dssp EECTTTTHHHHHHSSE
T ss_pred EeCCchhHHHHHhCCc
Confidence 999 799999999996
No 39
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=98.03 E-value=7.2e-06 Score=74.11 Aligned_cols=86 Identities=16% Similarity=0.178 Sum_probs=58.8
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCC--ceeEecCC---CCCChhhHHHHHHHHHhhccCCc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPH--GLVSFADG---LSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~--G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
+.+|+.++++.++++|+.+.++|+.+. .+..+|++.++.. +.++..+. ..++|..++ .+++.+ ++.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~----~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~-~~~~~~----~~~ 153 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND----QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESML-YLREKY----QIS 153 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT----HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHH-HHHHHT----TCS
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH----HHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHH-HHHHHc----CCC
Confidence 678999999999999999999998763 3567888887742 33443322 123443332 233333 332
Q ss_pred EEEEeCC-ccchhHHHhcCCC
Q psy4654 476 IHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 476 i~aafGN-~~DV~aYr~vGI~ 495 (559)
=...+|| .+|+.+.+.+|+.
T Consensus 154 ~~~~iGD~~~Di~~a~~aG~~ 174 (190)
T 2fi1_A 154 SGLVIGDRPIDIEAGQAAGLD 174 (190)
T ss_dssp SEEEEESSHHHHHHHHHTTCE
T ss_pred eEEEEcCCHHHHHHHHHcCCe
Confidence 3467899 7999999999985
No 40
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=98.01 E-value=2.5e-05 Score=72.30 Aligned_cols=114 Identities=7% Similarity=0.035 Sum_probs=70.0
Q ss_pred cccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccC
Q psy4654 399 PKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHG 473 (559)
Q Consensus 399 ~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~ 473 (559)
..+.+|+.++++.++++|+.+..+|..+. +.++.+|++.++. ++.++..+. ..++|..++ .+++.+ ...
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~-~~~~~~--~~~ 168 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSR---HSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYE-LAMDTL--HLG 168 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCH---HHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHH-HHHHHH--TCC
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCH---HHHHHHHHHCCChhhcceeEehhhcccCCCChHHHH-HHHHHh--CCC
Confidence 34689999999999999999999998864 4455667776764 344555432 123343332 233333 222
Q ss_pred CcEEEEeCC-ccchhHHHhcCCCCCcEEEEcCCCc---cccccceecchhHH
Q psy4654 474 VVIHAAYGS-NKDVSVYTSVGLKPRSIYIVGKVSK---KHQSQATVLSDGYA 521 (559)
Q Consensus 474 ~~i~aafGN-~~DV~aYr~vGI~~~~If~i~~~~~---~~~~~~~~~~~~Y~ 521 (559)
..=...+|| .+|+.+-+++|+. +..|+..+. .....+....++..
T Consensus 169 ~~~~~~iGD~~~Di~~a~~aG~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (230)
T 3um9_A 169 ESEILFVSCNSWDATGAKYFGYP---VCWINRSNGVFDQLGVVPDIVVSDVG 217 (230)
T ss_dssp GGGEEEEESCHHHHHHHHHHTCC---EEEECTTSCCCCCSSCCCSEEESSHH
T ss_pred cccEEEEeCCHHHHHHHHHCCCE---EEEEeCCCCccccccCCCcEEeCCHH
Confidence 222466788 7999999999995 445554432 11223344556653
No 41
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=98.01 E-value=8e-06 Score=76.44 Aligned_cols=91 Identities=10% Similarity=0.058 Sum_probs=60.3
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~ 474 (559)
.+.+|+.++++.++++|+.+.++|+.+.. .++..|++.|+. ++.++..+. ..++|..++ .+++.+ ....
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~-~~~~~l--g~~~ 177 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEK---AARAIAELTGLDTRLTVIAGDDSVERGKPHPDMAL-HVARGL--GIPP 177 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHH---HHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHH-HHHHHH--TCCG
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHH-HHHHHc--CCCH
Confidence 46889999999999999999999997653 445566666653 344444432 133443333 233333 2222
Q ss_pred cEEEEeCC-ccchhHHHhcCCCC
Q psy4654 475 VIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 475 ~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
.=...+|| .+|+.+.+++|+..
T Consensus 178 ~~~i~vGD~~~Di~~a~~aG~~~ 200 (237)
T 4ex6_A 178 ERCVVIGDGVPDAEMGRAAGMTV 200 (237)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEE
T ss_pred HHeEEEcCCHHHHHHHHHCCCeE
Confidence 23578999 79999999999964
No 42
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=97.98 E-value=1.2e-05 Score=73.37 Aligned_cols=90 Identities=20% Similarity=0.347 Sum_probs=59.9
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCC--ceeE-ecCC---------CCCChhhHHHHHHHHH
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPH--GLVS-FADG---------LSPGFLGHKASYLKSL 468 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~--G~L~-lr~g---------~~~dp~~~K~~~L~~L 468 (559)
+.+++.++++.++++|+.+.++|+|+.... +..+++.++.. .... ..++ ... ..-|...+..+
T Consensus 77 l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~K~~~l~~~ 151 (211)
T 1l7m_A 77 PTEGAEETIKELKNRGYVVAVVSGGFDIAV---NKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLK--ENAKGEILEKI 151 (211)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEEEEEEHHHH---HHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCS--TTHHHHHHHHH
T ss_pred CCccHHHHHHHHHHCCCEEEEEcCCcHHHH---HHHHHHcCCCeEEEeeeEEECCEEcCCcccCccC--CccHHHHHHHH
Confidence 468999999999999999999999986543 34555555532 1111 1110 011 13466677766
Q ss_pred hhccCCcE--EEEeCC-ccchhHHHhcCCC
Q psy4654 469 IQDHGVVI--HAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 469 ~~~~~~~i--~aafGN-~~DV~aYr~vGI~ 495 (559)
++..++.. ...+|| .+|+.+.+.+|+.
T Consensus 152 ~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~ 181 (211)
T 1l7m_A 152 AKIEGINLEDTVAVGDGANDISMFKKAGLK 181 (211)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHCSEE
T ss_pred HHHcCCCHHHEEEEecChhHHHHHHHCCCE
Confidence 55445433 788999 7999999999984
No 43
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=97.97 E-value=2.7e-05 Score=73.36 Aligned_cols=90 Identities=14% Similarity=0.107 Sum_probs=61.8
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~ 474 (559)
.+.+|+.++++.++++|+++.++|+.+. ..++.+|++.|+. ++.++..+. ..++|..++ .+++.+ ....
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~-~~~~~~--~~~~ 156 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLE---ELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVL-KTLEIL--GEEP 156 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCH---HHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHH-HHHHHH--TCCG
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCH---HHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHH-HHHHHh--CCCc
Confidence 4679999999999999999999998654 4556778888875 445554432 123443333 334444 2222
Q ss_pred cEEEEeCC-ccchhHHHhcCCC
Q psy4654 475 VIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 475 ~i~aafGN-~~DV~aYr~vGI~ 495 (559)
.=...+|| .+|+.+-+++|+.
T Consensus 157 ~~~~~vGD~~~Di~~a~~aG~~ 178 (222)
T 2nyv_A 157 EKALIVGDTDADIEAGKRAGTK 178 (222)
T ss_dssp GGEEEEESSHHHHHHHHHHTCE
T ss_pred hhEEEECCCHHHHHHHHHCCCe
Confidence 23467888 7999999999986
No 44
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=97.97 E-value=1.4e-05 Score=75.30 Aligned_cols=91 Identities=12% Similarity=0.115 Sum_probs=61.6
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCCC-CCChhhHHHHHHHHHhhccCC--
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADGL-SPGFLGHKASYLKSLIQDHGV-- 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g~-~~dp~~~K~~~L~~L~~~~~~-- 474 (559)
.+.+|+.++++.++++|+.+.++|+.+ ...++.+|++.++. ++.++..+.. ..+| |...++.++...++
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp---~~~~~~~~~~~~g~~~ 183 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKP---TVFAETILRYFDIDRYFKYIAGSNLDGTRVN---KNEVIQYVLDLCNVKD 183 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEE---HHHHHHHHHHTTCGGGCSEEEEECTTSCCCC---HHHHHHHHHHHHTCCC
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHHcCcHhhEEEEEeccccCCCCC---CHHHHHHHHHHcCCCC
Confidence 467899999999999999999999864 44566777777764 4555554422 2223 33333333332233
Q ss_pred -cEEEEeCC-ccchhHHHhcCCCC
Q psy4654 475 -VIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 475 -~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
.=...+|| .+|+.+-+++|+..
T Consensus 184 ~~~~i~vGD~~~Di~~a~~aG~~~ 207 (240)
T 3sd7_A 184 KDKVIMVGDRKYDIIGAKKIGIDS 207 (240)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEE
T ss_pred CCcEEEECCCHHHHHHHHHCCCCE
Confidence 24567889 79999999999863
No 45
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=97.96 E-value=2.7e-05 Score=70.15 Aligned_cols=108 Identities=13% Similarity=0.123 Sum_probs=68.6
Q ss_pred CCeeEEEeeccceeccccccCCC------cccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEe
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRD------PKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSF 449 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D------~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~l 449 (559)
..|+|+||+||||+++......+ .....+ .+++.++++|+.+.++|+++.. .++..+++.|++. ++
T Consensus 3 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~--~~l~~l~~~g~~~~i~T~~~~~---~~~~~~~~~gl~~---~~ 74 (164)
T 3e8m_A 3 EIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDS--AGIFWAHNKGIPVGILTGEKTE---IVRRRAEKLKVDY---LF 74 (164)
T ss_dssp CCCEEEECSTTTTSSSEEEECSSSCEEEEEEGGGH--HHHHHHHHTTCCEEEECSSCCH---HHHHHHHHTTCSE---EE
T ss_pred cceEEEEcCCCceEcCcEEEcCCCcEEEEecCChH--HHHHHHHHCCCEEEEEeCCChH---HHHHHHHHcCCCE---ee
Confidence 46899999999999976321111 112233 3689999999999999998754 4455666777753 12
Q ss_pred cCCCCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCC
Q psy4654 450 ADGLSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 450 r~g~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
.. ..++|+.++ .+++.+ .....-...+|| .+|+.+.+++|+.
T Consensus 75 ~~-~kpk~~~~~-~~~~~~--~~~~~~~~~vGD~~~Di~~~~~ag~~ 117 (164)
T 3e8m_A 75 QG-VVDKLSAAE-ELCNEL--GINLEQVAYIGDDLNDAKLLKRVGIA 117 (164)
T ss_dssp CS-CSCHHHHHH-HHHHHH--TCCGGGEEEECCSGGGHHHHTTSSEE
T ss_pred cc-cCChHHHHH-HHHHHc--CCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 21 233332222 223333 222334577899 7999999999984
No 46
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=97.96 E-value=3.6e-05 Score=71.44 Aligned_cols=90 Identities=14% Similarity=0.149 Sum_probs=60.5
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCCc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
+.+|+.++++.++++|+++..+|+.+... +..-|++.|+. ++.++..+. ..++|+.|.. +++.+ .+.-.
T Consensus 85 ~~pg~~~~l~~L~~~g~~~~i~tn~~~~~---~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~-a~~~l--g~~p~ 158 (216)
T 3kbb_A 85 ENPGVREALEFVKSKRIKLALATSTPQRE---ALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLL-VLERL--NVVPE 158 (216)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHH-HHHHH--TCCGG
T ss_pred cCccHHHHHHHHHHcCCCcccccCCcHHH---HHHHHHhcCCCccccccccccccCCCcccHHHHHH-HHHhh--CCCcc
Confidence 67899999999999999999999976543 44455666664 344554432 3566765553 34444 22211
Q ss_pred EEEEeCC-ccchhHHHhcCCCC
Q psy4654 476 IHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 476 i~aafGN-~~DV~aYr~vGI~~ 496 (559)
=...+|| ..|+.+-+++|+.+
T Consensus 159 e~l~VgDs~~Di~aA~~aG~~~ 180 (216)
T 3kbb_A 159 KVVVFEDSKSGVEAAKSAGIER 180 (216)
T ss_dssp GEEEEECSHHHHHHHHHTTCCC
T ss_pred ceEEEecCHHHHHHHHHcCCcE
Confidence 1344677 68999999999976
No 47
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=97.95 E-value=1.3e-05 Score=74.18 Aligned_cols=122 Identities=9% Similarity=-0.056 Sum_probs=73.7
Q ss_pred cccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCCC-CCChhhHHHHHHHHHhhccCC-
Q psy4654 399 PKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADGL-SPGFLGHKASYLKSLIQDHGV- 474 (559)
Q Consensus 399 ~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g~-~~dp~~~K~~~L~~L~~~~~~- 474 (559)
..+.+|+.++++.++++|+.+.++|+.+. +.++.+|++.++. ++.++..+.. ..+| |...++.+++..++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp---~~~~~~~~~~~l~~~ 163 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGI---DTATINLKALKLDINKINIVTRDDVSYGKP---DPDLFLAAAKKIGAP 163 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCH---HHHHHHHHTTTCCTTSSCEECGGGSSCCTT---STHHHHHHHHHTTCC
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCch---hhHHHHHHhcchhhhhheeeccccCCCCCC---ChHHHHHHHHHhCCC
Confidence 35688999999999999999999998764 4456777777775 3445544321 1222 22333333322233
Q ss_pred -cEEEEeCC-ccchhHHHhcCCCCCcEEEEcC--CC-cc-ccccceecchhHHHHHHHHhhc
Q psy4654 475 -VIHAAYGS-NKDVSVYTSVGLKPRSIYIVGK--VS-KK-HQSQATVLSDGYAAHLTALQQH 530 (559)
Q Consensus 475 -~i~aafGN-~~DV~aYr~vGI~~~~If~i~~--~~-~~-~~~~~~~~~~~Y~~hL~~l~~~ 530 (559)
.=...+|| .+|+.+.+++|+.. +-|.. .. +. ...++..+.++.. .|.++...
T Consensus 164 ~~~~i~iGD~~~Di~~a~~aG~~~---i~v~~g~~~~~~l~~~~ad~v~~~~~-el~~~l~~ 221 (233)
T 3s6j_A 164 IDECLVIGDAIWDMLAARRCKATG---VGLLSGGYDIGELERAGALRVYEDPL-DLLNHLDE 221 (233)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEE---EEEGGGSCCHHHHHHTTCSEEESSHH-HHHHTGGG
T ss_pred HHHEEEEeCCHHhHHHHHHCCCEE---EEEeCCCCchHhHHhcCCCEEECCHH-HHHHHHHH
Confidence 23578999 79999999999953 33322 11 11 1123455667764 35444433
No 48
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=97.94 E-value=1.2e-05 Score=77.78 Aligned_cols=66 Identities=20% Similarity=0.309 Sum_probs=54.8
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEe
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSF 449 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~l 449 (559)
.|+|+|||||||.+++. +.+++.+.+++++++|.+++++|||+..........|.+.|++ .+.++.
T Consensus 8 ~kli~~DlDGTLl~~~~-------~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~ 75 (268)
T 3qgm_A 8 KKGYIIDIDGVIGKSVT-------PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILV 75 (268)
T ss_dssp CSEEEEECBTTTEETTE-------ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEE
T ss_pred CCEEEEcCcCcEECCCE-------eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeC
Confidence 58999999999998653 4578999999999999999999999888888888888888774 334443
No 49
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=97.94 E-value=5.7e-06 Score=78.87 Aligned_cols=108 Identities=19% Similarity=0.244 Sum_probs=70.2
Q ss_pred CCeeEEEeeccceeccccccCCC---c-ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecC
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRD---P-KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFAD 451 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D---~-~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~ 451 (559)
+.++||||+||||+++......+ . .........++.++++|+++.++|+++.. .++..+++.|++. + +.
T Consensus 24 ~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~---~~~~~l~~lgi~~--~-~~- 96 (195)
T 3n07_A 24 QIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQ---IVENRMKALGISL--I-YQ- 96 (195)
T ss_dssp TCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCH---HHHHHHHHTTCCE--E-EC-
T ss_pred CCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHH---HHHHHHHHcCCcE--E-ee-
Confidence 46899999999999965322111 0 01112223489999999999999998754 4455667777763 2 22
Q ss_pred CCCCChhhHHHHHHHHHhhccCC--cEEEEeCC-ccchhHHHhcCCC
Q psy4654 452 GLSPGFLGHKASYLKSLIQDHGV--VIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 452 g~~~dp~~~K~~~L~~L~~~~~~--~i~aafGN-~~DV~aYr~vGI~ 495 (559)
+..+ |...++.++...++ .=...+|| .+|+.+.+.+|+.
T Consensus 97 ~~k~-----k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~ 138 (195)
T 3n07_A 97 GQDD-----KVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALR 138 (195)
T ss_dssp SCSS-----HHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEE
T ss_pred CCCC-----cHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCE
Confidence 1222 55555555432232 33577899 7999999999976
No 50
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=97.94 E-value=1e-05 Score=76.24 Aligned_cols=108 Identities=19% Similarity=0.201 Sum_probs=69.5
Q ss_pred CCeeEEEeeccceeccccccCC------CcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEe
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGR------DPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSF 449 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~------D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~l 449 (559)
+.++|+||+||||+++...... ......|+ .++.++++|+.+.++|+++.. .++..|++.|++. ++
T Consensus 18 ~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~--~l~~L~~~g~~~~ivTn~~~~---~~~~~l~~lgl~~---~~ 89 (191)
T 3n1u_A 18 KIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGM--GLKLLMAAGIQVAIITTAQNA---VVDHRMEQLGITH---YY 89 (191)
T ss_dssp TCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHH--HHHHHHHTTCEEEEECSCCSH---HHHHHHHHHTCCE---EE
T ss_pred cCCEEEEeCCCCCCCCceeecCCchhhhhccccChH--HHHHHHHCCCeEEEEeCcChH---HHHHHHHHcCCcc---ce
Confidence 5689999999999986532211 11122222 489999999999999998754 4455666667753 22
Q ss_pred cCCCCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCC
Q psy4654 450 ADGLSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 450 r~g~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
. +..++|..++ .+++.+ .....=...+|| .+|+.+.+.+|+.
T Consensus 90 ~-~~kpk~~~~~-~~~~~~--~~~~~~~~~vGD~~~Di~~~~~ag~~ 132 (191)
T 3n1u_A 90 K-GQVDKRSAYQ-HLKKTL--GLNDDEFAYIGDDLPDLPLIQQVGLG 132 (191)
T ss_dssp C-SCSSCHHHHH-HHHHHH--TCCGGGEEEEECSGGGHHHHHHSSEE
T ss_pred e-CCCChHHHHH-HHHHHh--CCCHHHEEEECCCHHHHHHHHHCCCE
Confidence 2 2244453322 333333 222233577899 7999999999987
No 51
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=97.92 E-value=2.7e-05 Score=72.71 Aligned_cols=111 Identities=19% Similarity=0.199 Sum_probs=69.8
Q ss_pred CCeeEEEeeccceeccccccCCCcc----cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecC
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPK----VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFAD 451 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~----~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~ 451 (559)
..++|+||+||||+++......+.. .......+++.++++|+.++++|+++.. .++.++++.|++. + +..
T Consensus 25 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~v~ivT~~~~~---~~~~~l~~lgl~~--~-~~~ 98 (188)
T 2r8e_A 25 NIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAK---LVEDRCATLGITH--L-YQG 98 (188)
T ss_dssp TCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHTTTCEEEEECSSCCH---HHHHHHHHHTCCE--E-ECS
T ss_pred cCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHHCCCeEEEEeCCChH---HHHHHHHHcCCce--e-ecC
Confidence 5689999999999986532211110 1111234799999999999999999864 4556677777752 2 222
Q ss_pred CCCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 452 GLSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 452 g~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
..++|..++. +++.+ .....-...+|| .+|+.+.+.+|+..
T Consensus 99 -~kpk~~~~~~-~~~~~--g~~~~~~~~iGD~~~Di~~a~~ag~~~ 140 (188)
T 2r8e_A 99 -QSNKLIAFSD-LLEKL--AIAPENVAYVGDDLIDWPVMEKVGLSV 140 (188)
T ss_dssp -CSCSHHHHHH-HHHHH--TCCGGGEEEEESSGGGHHHHTTSSEEE
T ss_pred -CCCCHHHHHH-HHHHc--CCCHHHEEEECCCHHHHHHHHHCCCEE
Confidence 2344433322 22222 122233577899 79999999999863
No 52
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=97.92 E-value=2.5e-05 Score=75.36 Aligned_cols=58 Identities=14% Similarity=0.178 Sum_probs=45.3
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP 443 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP 443 (559)
.|.|+||+||||..++. .+.+.+.+.+++++++|+.++++|||+.... +.++.+.+++
T Consensus 5 ~kli~~DlDGTLl~~~~------~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~---~~~~~~l~~~ 62 (227)
T 1l6r_A 5 IRLAAIDVDGNLTDRDR------LISTKAIESIRSAEKKGLTVSLLSGNVIPVV---YALKIFLGIN 62 (227)
T ss_dssp CCEEEEEHHHHSBCTTS------CBCHHHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHHHTCC
T ss_pred eEEEEEECCCCCcCCCC------cCCHHHHHHHHHHHHCCCEEEEECCCCcHHH---HHHHHHhCCC
Confidence 38999999999998642 3567789999999999999999999986543 3444444443
No 53
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=97.91 E-value=1.6e-05 Score=81.17 Aligned_cols=89 Identities=15% Similarity=0.175 Sum_probs=60.8
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCc--eeE-ecCC----------CCCChhhHHHHHHH
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHG--LVS-FADG----------LSPGFLGHKASYLK 466 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G--~L~-lr~g----------~~~dp~~~K~~~L~ 466 (559)
++.+|+.++++.++++|+++..+|+.+ ...++.++++.|+..- .++ ..++ ... .-|.+.++
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~---~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~---kpkp~~~~ 252 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGL---DIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNA---ANKKQTLV 252 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEE---HHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCH---HHHHHHHH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCcc---HHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCC---CCCHHHHH
Confidence 478999999999999999999999955 4666777777777421 111 1111 111 23556666
Q ss_pred HHhhccCC--cEEEEeCC-ccchhHHHhcCC
Q psy4654 467 SLIQDHGV--VIHAAYGS-NKDVSVYTSVGL 494 (559)
Q Consensus 467 ~L~~~~~~--~i~aafGN-~~DV~aYr~vGI 494 (559)
.++...++ .=...+|| .+|+.+.+++|+
T Consensus 253 ~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~ 283 (317)
T 4eze_A 253 DLAARLNIATENIIACGDGANDLPMLEHAGT 283 (317)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred HHHHHcCCCcceEEEEeCCHHHHHHHHHCCC
Confidence 55443333 23567889 799999999997
No 54
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=97.90 E-value=3.1e-05 Score=72.57 Aligned_cols=106 Identities=24% Similarity=0.256 Sum_probs=69.2
Q ss_pred CCeeEEEeeccceeccccccCCCc------ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEe
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDP------KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSF 449 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~------~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~l 449 (559)
..|+||||+||||+++........ ....+ .+++.++++|+++..+|+++.... +..+++.|+.. + +
T Consensus 18 ~ik~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~--~~l~~L~~~g~~~~i~T~~~~~~~---~~~~~~lgl~~--~-f 89 (189)
T 3mn1_A 18 AIKLAVFDVDGVLTDGRLYFMEDGSEIKTFNTLDG--QGIKMLIASGVTTAIISGRKTAIV---ERRAKSLGIEH--L-F 89 (189)
T ss_dssp TCCEEEECSTTTTSCSEEEEETTSCEEEEEEHHHH--HHHHHHHHTTCEEEEECSSCCHHH---HHHHHHHTCSE--E-E
T ss_pred hCCEEEEcCCCCcCCccEeeccCCcEeeeeccccH--HHHHHHHHCCCEEEEEECcChHHH---HHHHHHcCCHH--H-h
Confidence 468999999999999864321110 11222 289999999999999999986544 44555556532 1 1
Q ss_pred cCCCCCChhhHHHHHHHHHhhccC--CcEEEEeCC-ccchhHHHhcCCC
Q psy4654 450 ADGLSPGFLGHKASYLKSLIQDHG--VVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 450 r~g~~~dp~~~K~~~L~~L~~~~~--~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
. .... |.+.++.+.+..+ ..-...+|| .+|+.+.+++|+.
T Consensus 90 ~-~~~~-----K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~ 132 (189)
T 3mn1_A 90 Q-GRED-----KLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLG 132 (189)
T ss_dssp C-SCSC-----HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE
T ss_pred c-CcCC-----hHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCe
Confidence 1 1223 4455555543323 234577899 7999999999985
No 55
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=97.89 E-value=1.6e-05 Score=78.43 Aligned_cols=69 Identities=17% Similarity=0.258 Sum_probs=47.0
Q ss_pred ceeEEEEEEeeCCCCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCC
Q psy4654 363 HTSVDFYLAVVPPRTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNF 442 (559)
Q Consensus 363 ~t~~~~~i~v~~~~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhgl 442 (559)
+++-.+| |....|+|+||+||||.+++. .+.+...+.+++++++|+.+++.|||+..... .++.+.++
T Consensus 10 ~~~~~~~---~~~~~kli~~DlDGTLl~~~~------~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~---~~~~~l~~ 77 (285)
T 3pgv_A 10 HHHENLY---FQGMYQVVASDLDGTLLSPDH------FLTPYAKETLKLLTARGINFVFATGRHYIDVG---QIRDNLGI 77 (285)
T ss_dssp --------------CCEEEEECCCCCSCTTS------CCCHHHHHHHHHHHTTTCEEEEECSSCGGGGH---HHHHHHCS
T ss_pred ccccccc---ccCcceEEEEeCcCCCCCCCC------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH---HHHHhcCC
Confidence 3445555 778889999999999998753 35667899999999999999999999987654 34444455
Q ss_pred C
Q psy4654 443 P 443 (559)
Q Consensus 443 P 443 (559)
+
T Consensus 78 ~ 78 (285)
T 3pgv_A 78 R 78 (285)
T ss_dssp C
T ss_pred C
Confidence 5
No 56
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.85 E-value=3e-05 Score=72.38 Aligned_cols=89 Identities=8% Similarity=0.001 Sum_probs=57.9
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC-CCCChhhHHHHHHHHHhhccCCcEE
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG-LSPGFLGHKASYLKSLIQDHGVVIH 477 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g-~~~dp~~~K~~~L~~L~~~~~~~i~ 477 (559)
+.+|+.++++.+++ ||++..+|+.+... ++..|++.|+. ++.++..++ ..++|+.++. +++.+ .....=.
T Consensus 85 ~~~g~~~~l~~L~~-~~~l~i~T~~~~~~---~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~-~~~~l--g~~p~~~ 157 (210)
T 2ah5_A 85 LFPQIIDLLEELSS-SYPLYITTTKDTST---AQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQ-ALQTH--QLAPEQA 157 (210)
T ss_dssp ECTTHHHHHHHHHT-TSCEEEEEEEEHHH---HHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHH-HHHHT--TCCGGGE
T ss_pred CCCCHHHHHHHHHc-CCeEEEEeCCCHHH---HHHHHHhcCchhheeeeecCCCCCCCChHHHHH-HHHHc--CCCcccE
Confidence 46899999999999 99999999765433 44567777775 445555541 1234444432 22333 1121225
Q ss_pred EEeCC-ccchhHHHhcCCCC
Q psy4654 478 AAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 478 aafGN-~~DV~aYr~vGI~~ 496 (559)
..+|| ..|+.+-+++|+..
T Consensus 158 ~~vgDs~~Di~~a~~aG~~~ 177 (210)
T 2ah5_A 158 IIIGDTKFDMLGARETGIQK 177 (210)
T ss_dssp EEEESSHHHHHHHHHHTCEE
T ss_pred EEECCCHHHHHHHHHCCCcE
Confidence 67888 69999999999963
No 57
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=97.83 E-value=4.1e-05 Score=73.85 Aligned_cols=106 Identities=23% Similarity=0.237 Sum_probs=70.1
Q ss_pred CCeeEEEeeccceeccccccCCC---c---ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEe
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRD---P---KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSF 449 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D---~---~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~l 449 (559)
..|+||||+||||+++......+ . ....+. +++.++++|+++..+|+++.... +..+++.|+.. ++
T Consensus 48 ~ik~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~~--~L~~L~~~G~~l~I~T~~~~~~~---~~~l~~lgi~~---~f 119 (211)
T 3ij5_A 48 NIRLLICDVDGVMSDGLIYMGNQGEELKAFNVRDGY--GIRCLITSDIDVAIITGRRAKLL---EDRANTLGITH---LY 119 (211)
T ss_dssp TCSEEEECCTTTTSSSEEEEETTSCEEEEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHH---HHHHHHHTCCE---EE
T ss_pred CCCEEEEeCCCCEECCHHHHhhhhHHHHHhccchHH--HHHHHHHCCCEEEEEeCCCHHHH---HHHHHHcCCch---hh
Confidence 56899999999999986421111 1 112222 89999999999999999976544 44566666642 22
Q ss_pred cCCCCCChhhHHHHHHHHHhhccC--CcEEEEeCC-ccchhHHHhcCCC
Q psy4654 450 ADGLSPGFLGHKASYLKSLIQDHG--VVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 450 r~g~~~dp~~~K~~~L~~L~~~~~--~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
. +... |.+.++.++...+ ..-...+|| .+|+.+.+++|++
T Consensus 120 ~-~~k~-----K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~ 162 (211)
T 3ij5_A 120 Q-GQSD-----KLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLS 162 (211)
T ss_dssp C-SCSS-----HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEE
T ss_pred c-ccCC-----hHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCE
Confidence 2 1223 4455555443223 334678999 7999999999975
No 58
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=97.82 E-value=5.5e-05 Score=69.27 Aligned_cols=90 Identities=13% Similarity=0.106 Sum_probs=59.1
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCCC---CCChhhHHHHHHHHHhhccCC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADGL---SPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g~---~~dp~~~K~~~L~~L~~~~~~ 474 (559)
.+.+++.++++.+++.|+.++++|+.+.. ....+|++.++. ++.++..+.. .++|..++ .+++.+ ....
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~-~~~~~~--~i~~ 167 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLH---MLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYL-DCAAKL--GVDP 167 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHH-HHHHHH--TSCG
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHH---HHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHH-HHHHHc--CCCH
Confidence 35688999999999999999999988643 345667777764 3445544321 22332222 233333 2222
Q ss_pred cEEEEeCC-ccchhHHHhcCCC
Q psy4654 475 VIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 475 ~i~aafGN-~~DV~aYr~vGI~ 495 (559)
.=...+|| .+|+.+.+.+|+.
T Consensus 168 ~~~i~iGD~~nDi~~a~~aG~~ 189 (226)
T 1te2_A 168 LTCVALEDSVNGMIASKAARMR 189 (226)
T ss_dssp GGEEEEESSHHHHHHHHHTTCE
T ss_pred HHeEEEeCCHHHHHHHHHcCCE
Confidence 33577899 7999999999986
No 59
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=97.82 E-value=2.5e-05 Score=71.85 Aligned_cols=87 Identities=16% Similarity=0.124 Sum_probs=59.1
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~ 474 (559)
.+.+|+.+ ++.++++ +++.++|+.+. ..++.+|++.|+. ++.++..+. ..++|+.++ .+++.+ +.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~-~~~~~~----~~ 143 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSI---NEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYK-YFLDSI----GA 143 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCH---HHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHH-HHHHHH----TC
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCH---HHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHH-HHHHhc----CC
Confidence 45789999 9999999 99999999873 4566778888775 344554432 234454443 244444 11
Q ss_pred cEEEEeCC-ccchhHHHhcCCCC
Q psy4654 475 VIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 475 ~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
.=...+|| ..|+.+-+++|+..
T Consensus 144 ~~~~~vGD~~~Di~~a~~aG~~~ 166 (201)
T 2w43_A 144 KEAFLVSSNAFDVIGAKNAGMRS 166 (201)
T ss_dssp SCCEEEESCHHHHHHHHHTTCEE
T ss_pred CcEEEEeCCHHHhHHHHHCCCEE
Confidence 12356788 68999999999963
No 60
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=97.82 E-value=1.5e-05 Score=77.29 Aligned_cols=60 Identities=17% Similarity=0.298 Sum_probs=51.9
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP 443 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP 443 (559)
.|+|+|||||||.++. .+.+++.+.+++++++|..++++|||+..........|.+.|++
T Consensus 6 ~kli~~DlDGTLl~~~-------~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 6 YKGYLIDLDGTMYNGT-------EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp CSEEEEECSSSTTCHH-------HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEeCcCceEeCC-------EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 5899999999998763 24567999999999999999999999888888888888888774
No 61
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=97.81 E-value=8.1e-05 Score=72.37 Aligned_cols=91 Identities=11% Similarity=0.119 Sum_probs=59.5
Q ss_pred cccchhHHHHHHHHHHCCC--eEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC-----CCCChhhHHHHHHHHHh
Q psy4654 399 PKVRAGAVDIVRHWQELGY--LIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG-----LSPGFLGHKASYLKSLI 469 (559)
Q Consensus 399 ~~~~~GA~elv~~l~~~GY--~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g-----~~~dp~~~K~~~L~~L~ 469 (559)
..+.+|+.++++.++++|+ .+.++|+.+... .+..|++.|+. ++.++..+. ...+| |.+.++.++
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~---~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp---~~~~~~~~~ 214 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNH---AIRCLRLLGIADLFDGLTYCDYSRTDTLVCKP---HVKAFEKAM 214 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHH---HHHHHHHHTCTTSCSEEECCCCSSCSSCCCTT---SHHHHHHHH
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHH---HHHHHHhCCcccccceEEEeccCCCcccCCCc---CHHHHHHHH
Confidence 3468999999999999999 999999876543 44555555652 344444321 12233 333344333
Q ss_pred hccCCc---EEEEeCC-ccchhHHHhcCCC
Q psy4654 470 QDHGVV---IHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 470 ~~~~~~---i~aafGN-~~DV~aYr~vGI~ 495 (559)
...++. =...+|| .+|+.+-+++|+.
T Consensus 215 ~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~ 244 (282)
T 3nuq_A 215 KESGLARYENAYFIDDSGKNIETGIKLGMK 244 (282)
T ss_dssp HHHTCCCGGGEEEEESCHHHHHHHHHHTCS
T ss_pred HHcCCCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 323433 2577899 7999999999994
No 62
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=97.81 E-value=6.9e-05 Score=72.55 Aligned_cols=96 Identities=19% Similarity=0.154 Sum_probs=64.7
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecC---CCCCChhhHHHHHHHHHhhccCC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFAD---GLSPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~---g~~~dp~~~K~~~L~~L~~~~~~ 474 (559)
.+.+|+.++++.++++|+.+.++|..+.. ....|++.|+. ++.++..+ ...++|..++ .+++.+ ....
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~----~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~-~~~~~~--g~~~ 178 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR----LEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQ-EALRLA--HMEP 178 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT----HHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHH-HHHHHH--TCCG
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH----HHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHH-HHHHHc--CCCH
Confidence 46789999999999999999999986643 36778888873 34455432 1244554433 334444 2222
Q ss_pred cEEEEeCC-c-cchhHHHhcCCCCCcEEEEcCC
Q psy4654 475 VIHAAYGS-N-KDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 475 ~i~aafGN-~-~DV~aYr~vGI~~~~If~i~~~ 505 (559)
.=...+|| . +|+.+-+++|+. +..++..
T Consensus 179 ~~~~~vGD~~~~Di~~a~~aG~~---~i~~~~~ 208 (263)
T 3k1z_A 179 VVAAHVGDNYLCDYQGPRAVGMH---SFLVVGP 208 (263)
T ss_dssp GGEEEEESCHHHHTHHHHTTTCE---EEEECCS
T ss_pred HHEEEECCCcHHHHHHHHHCCCE---EEEEcCC
Confidence 33567888 5 899999999996 4556654
No 63
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=97.80 E-value=7.9e-05 Score=71.27 Aligned_cols=90 Identities=12% Similarity=0.119 Sum_probs=60.5
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCCc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
+.+|+.++++.++++|+.+.++|+.+.. .++.+|++.|+. ++.++..+. ..++|..++ .+++.+ .....
T Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~-~~~~~~--~~~~~ 188 (243)
T 2hsz_A 115 LYPNVKETLEALKAQGYILAVVTNKPTK---HVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFY-YLCGKF--GLYPK 188 (243)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHH-HHHHHH--TCCGG
T ss_pred cCCCHHHHHHHHHHCCCEEEEEECCcHH---HHHHHHHHcCchheEEEEEecccCCCCCcCHHHHH-HHHHHh--CcChh
Confidence 4588999999999999999999998654 456777777775 344444332 233443332 334444 22223
Q ss_pred EEEEeCC-ccchhHHHhcCCCC
Q psy4654 476 IHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 476 i~aafGN-~~DV~aYr~vGI~~ 496 (559)
=...+|| .+|+.+.+++|+..
T Consensus 189 ~~~~vGD~~~Di~~a~~aG~~~ 210 (243)
T 2hsz_A 189 QILFVGDSQNDIFAAHSAGCAV 210 (243)
T ss_dssp GEEEEESSHHHHHHHHHHTCEE
T ss_pred hEEEEcCCHHHHHHHHHCCCeE
Confidence 3567899 79999999999963
No 64
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=97.78 E-value=2e-05 Score=71.34 Aligned_cols=110 Identities=20% Similarity=0.318 Sum_probs=69.8
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC----CCCChhhHHHHHHHHHhhccC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG----LSPGFLGHKASYLKSLIQDHG 473 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g----~~~dp~~~K~~~L~~L~~~~~ 473 (559)
.+.+|+.++++.++++|+.+.++|+.+....+. + ++.++. ...+...++ ....| ..|...++.+ .
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~k~~~l~~l-~--- 149 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEP---F-KELGDEFMANRAIFEDGKFQGIRLRF-RDKGEFLKRF-R--- 149 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGG---G-TTTSSEEEEEEEEEETTEEEEEECCS-SCHHHHHGGG-T---
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHH---H-HHcCchhheeeEEeeCCceECCcCCc-cCHHHHHHhc-C---
Confidence 468999999999999999999999877654332 3 344543 222222221 11222 2488888888 2
Q ss_pred CcEEEEeCC-ccchhHHHhcCCCCCcEEEEcCCCccccccceecchhHHHHHHHH
Q psy4654 474 VVIHAAYGS-NKDVSVYTSVGLKPRSIYIVGKVSKKHQSQATVLSDGYAAHLTAL 527 (559)
Q Consensus 474 ~~i~aafGN-~~DV~aYr~vGI~~~~If~i~~~~~~~~~~~~~~~~~Y~~hL~~l 527 (559)
..=...+|| .+|+.+.+.+|++ +.++.... .+....++.. .|.++
T Consensus 150 ~~~~i~iGD~~~Di~~~~~ag~~----v~~~~~~~----~ad~v~~~~~-el~~~ 195 (201)
T 4ap9_A 150 DGFILAMGDGYADAKMFERADMG----IAVGREIP----GADLLVKDLK-ELVDF 195 (201)
T ss_dssp TSCEEEEECTTCCHHHHHHCSEE----EEESSCCT----TCSEEESSHH-HHHHH
T ss_pred cCcEEEEeCCHHHHHHHHhCCce----EEECCCCc----cccEEEccHH-HHHHH
Confidence 222467889 7999999999994 35565433 3445566654 34444
No 65
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=97.78 E-value=2.5e-05 Score=75.98 Aligned_cols=61 Identities=16% Similarity=0.172 Sum_probs=51.9
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP 443 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP 443 (559)
..|.|+||+||||.+++. ..+++.+.+++++++|..++++|+|+..........|.+.|++
T Consensus 4 ~~kli~~DlDGTLl~~~~-------~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 4 AYKGYLIDLDGTIYKGKS-------RIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp CCCEEEECCBTTTEETTE-------ECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred CCCEEEEeCCCceEeCCE-------ECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 358999999999998753 2378999999999999999999988877777788888887774
No 66
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=97.77 E-value=7.1e-05 Score=71.57 Aligned_cols=94 Identities=11% Similarity=-0.012 Sum_probs=60.7
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~ 474 (559)
.+.+|+.++++.++ |+.+.++|+.+.. .++.+|++.|+. ++.++..+. ..++|..++. +++.+ ....
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~---~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~-~~~~~--~~~~ 164 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPD---MLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYAL-VEEVL--GVTP 164 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHH---HHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHH-HHHHH--CCCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHH---HHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHH-HHHHc--CCCH
Confidence 35689999999998 9999999998754 345577777764 344554432 2344534332 34444 2222
Q ss_pred cEEEEeCC-ccchhHHHhcCCCCCcEEEEcC
Q psy4654 475 VIHAAYGS-NKDVSVYTSVGLKPRSIYIVGK 504 (559)
Q Consensus 475 ~i~aafGN-~~DV~aYr~vGI~~~~If~i~~ 504 (559)
.=...+|| .+|+.+-+++|+.. ..++.
T Consensus 165 ~~~~~vGD~~~Di~~a~~aG~~~---~~~~~ 192 (253)
T 1qq5_A 165 AEVLFVSSNGFDVGGAKNFGFSV---ARVAR 192 (253)
T ss_dssp GGEEEEESCHHHHHHHHHHTCEE---EEECC
T ss_pred HHEEEEeCChhhHHHHHHCCCEE---EEECC
Confidence 22345677 79999999999863 45554
No 67
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.75 E-value=2.8e-05 Score=71.24 Aligned_cols=89 Identities=17% Similarity=0.172 Sum_probs=57.8
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCCC---CCChhhHHHHHHHHHhhccCCc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADGL---SPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g~---~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
+.+++.++++.++++|+.+.++|+.+. ......|++.++. ++.++..+.. .++|..++ .+++.+ .....
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~--~~~~~ 163 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYR---FRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLL-LAIDRL--KACPE 163 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCH---HHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHH-HHHHHT--TCCGG
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCH---HHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHH-HHHHHh--CCChH
Confidence 468999999999999999999998764 3455667777764 3444443321 22232222 233333 22222
Q ss_pred EEEEeCC-ccchhHHHhcCCC
Q psy4654 476 IHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 476 i~aafGN-~~DV~aYr~vGI~ 495 (559)
=...+|| .+|+.+.+.+|+.
T Consensus 164 ~~i~iGD~~nDi~~~~~aG~~ 184 (225)
T 3d6j_A 164 EVLYIGDSTVDAGTAAAAGVS 184 (225)
T ss_dssp GEEEEESSHHHHHHHHHHTCE
T ss_pred HeEEEcCCHHHHHHHHHCCCe
Confidence 3568899 7999999999985
No 68
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=97.75 E-value=0.00011 Score=66.93 Aligned_cols=94 Identities=18% Similarity=0.202 Sum_probs=61.4
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEe------cCC-----CCCChh-hHHHHHHHHH
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSF------ADG-----LSPGFL-GHKASYLKSL 468 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~l------r~g-----~~~dp~-~~K~~~L~~L 468 (559)
+.+|+.++++.++++|+.+..+|+.+. ..++..+++.|++...++. .++ ...+|. ..|...+.++
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLS---ESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA 159 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcH---HHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence 678999999999999999999998654 3455667777886543332 111 112221 2355555554
Q ss_pred hhccCCcEEEEeCC-ccchhHHHhcCCCCCcE
Q psy4654 469 IQDHGVVIHAAYGS-NKDVSVYTSVGLKPRSI 499 (559)
Q Consensus 469 ~~~~~~~i~aafGN-~~DV~aYr~vGI~~~~I 499 (559)
. .....=...+|| .+|+.+. +.|+..--|
T Consensus 160 ~-~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v 189 (219)
T 3kd3_A 160 K-GLIDGEVIAIGDGYTDYQLY-EKGYATKFI 189 (219)
T ss_dssp G-GGCCSEEEEEESSHHHHHHH-HHTSCSEEE
T ss_pred h-CCCCCCEEEEECCHhHHHHH-hCCCCcEEE
Confidence 3 233445778999 6899997 578876444
No 69
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=97.74 E-value=6.2e-05 Score=70.16 Aligned_cols=94 Identities=15% Similarity=0.034 Sum_probs=59.5
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCCC---CCChhhHHHHHHHHHhhccCCc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADGL---SPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g~---~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
+.+|+.++++.++++|+.+.++|+.+. +...|++.|+. ++.++..+.. .++|..++ .+++.+ .....
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-----~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~-~~~~~l--gi~~~ 164 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN-----APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFL-TAAAML--DVSPA 164 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT-----HHHHHHHTTCTTTCSEECCC---------CCHHH-HHHHHH--TSCGG
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh-----HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHH-HHHHHc--CCCHH
Confidence 588999999999999999999999743 56678888774 3444433321 22332332 233333 22223
Q ss_pred EEEEeCC-ccchhHHHhcCCCCCcEEEEcCC
Q psy4654 476 IHAAYGS-NKDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 476 i~aafGN-~~DV~aYr~vGI~~~~If~i~~~ 505 (559)
=...+|| .+|+.+-+++|+. +..++..
T Consensus 165 ~~i~vGDs~~Di~~a~~aG~~---~~~~~~~ 192 (233)
T 3nas_A 165 DCAAIEDAEAGISAIKSAGMF---AVGVGQG 192 (233)
T ss_dssp GEEEEECSHHHHHHHHHTTCE---EEECC--
T ss_pred HEEEEeCCHHHHHHHHHcCCE---EEEECCc
Confidence 3567889 7999999999994 4455543
No 70
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=97.73 E-value=2.6e-05 Score=74.08 Aligned_cols=90 Identities=12% Similarity=0.124 Sum_probs=55.8
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhC-CC--CCceeEecC--C-CCCChhhHHHHHHHHHhhccC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQH-NF--PHGLVSFAD--G-LSPGFLGHKASYLKSLIQDHG 473 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qh-gl--P~G~L~lr~--g-~~~dp~~~K~~~L~~L~~~~~ 473 (559)
.+.+|+.++++.++++|+.+.++|+.+.... ...|.++ ++ .++.++..+ . ...+| |.+.++.+++..+
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~---~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp---~~~~~~~~~~~lg 185 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASF---DMKTSRHKEFFSLFSHIVLGDDPEVQHGKP---DPDIFLACAKRFS 185 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHH---HHHTTTCHHHHTTSSCEECTTCTTCCSCTT---STHHHHHHHHTSS
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHH---HHHHHhccCHHhheeeEEecchhhccCCCC---ChHHHHHHHHHcC
Confidence 3678999999999999999999999874322 2233332 22 133444444 2 12222 2222333333334
Q ss_pred C----cEEEEeCC-ccchhHHHhcCCC
Q psy4654 474 V----VIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 474 ~----~i~aafGN-~~DV~aYr~vGI~ 495 (559)
+ .=...+|| .+|+.+-+++|+.
T Consensus 186 i~~~~~~~i~iGD~~~Di~~a~~aG~~ 212 (250)
T 3l5k_A 186 PPPAMEKCLVFEDAPNGVEAALAAGMQ 212 (250)
T ss_dssp SCCCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred CCCCcceEEEEeCCHHHHHHHHHcCCE
Confidence 3 23678999 6999999999985
No 71
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=97.73 E-value=8.5e-05 Score=67.88 Aligned_cols=88 Identities=8% Similarity=-0.054 Sum_probs=57.7
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecC---CCCCChhhHHHHHHHHHhhccCCc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFAD---GLSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~---g~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
+.+|+.++++.++++| .+.++|+.+.. ....+|++.|+. ++.++..+ ...++|..++ .+++.+ .....
T Consensus 87 ~~~~~~~~l~~l~~~g-~~~i~s~~~~~---~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~-~~~~~~--~~~~~ 159 (200)
T 3cnh_A 87 PRPEVLALARDLGQRY-RMYSLNNEGRD---LNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYR-LGLTLA--QVRPE 159 (200)
T ss_dssp BCHHHHHHHHHHTTTS-EEEEEECCCHH---HHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHH-HHHHHH--TCCGG
T ss_pred cCccHHHHHHHHHHcC-CEEEEeCCcHH---HHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHH-HHHHHc--CCCHH
Confidence 6789999999999999 99999997644 355566666654 34444432 1234554433 334444 22222
Q ss_pred EEEEeCC-ccchhHHHhcCCC
Q psy4654 476 IHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 476 i~aafGN-~~DV~aYr~vGI~ 495 (559)
=...+|| .+|+.+.+++|+.
T Consensus 160 ~~~~vgD~~~Di~~a~~aG~~ 180 (200)
T 3cnh_A 160 EAVMVDDRLQNVQAARAVGMH 180 (200)
T ss_dssp GEEEEESCHHHHHHHHHTTCE
T ss_pred HeEEeCCCHHHHHHHHHCCCE
Confidence 2456788 6899999999985
No 72
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=97.69 E-value=7.5e-05 Score=71.37 Aligned_cols=93 Identities=14% Similarity=0.017 Sum_probs=57.9
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecCC---CCCChhhHHHHHHHHHhhccCC-cE
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFADG---LSPGFLGHKASYLKSLIQDHGV-VI 476 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~-~i 476 (559)
+.+|+.++++.++++|+.+.++|+.+....+...+.+.-.++..+.++..+. ..++|..++ .+++.+ .... .=
T Consensus 104 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~-~~~~~l--gi~~~~~ 180 (267)
T 1swv_A 104 PINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCY-KNAMEL--GVYPMNH 180 (267)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHH-HHHHHH--TCCSGGG
T ss_pred cCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHH-HHHHHh--CCCCCcC
Confidence 4578899999999999999999988765555444444333332233333321 233443333 233444 2222 23
Q ss_pred EEEeCC-ccchhHHHhcCCCC
Q psy4654 477 HAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 477 ~aafGN-~~DV~aYr~vGI~~ 496 (559)
...+|| .+|+.+.+.+|+..
T Consensus 181 ~i~iGD~~nDi~~a~~aG~~~ 201 (267)
T 1swv_A 181 MIKVGDTVSDMKEGRNAGMWT 201 (267)
T ss_dssp EEEEESSHHHHHHHHHTTSEE
T ss_pred EEEEeCCHHHHHHHHHCCCEE
Confidence 678999 69999999999853
No 73
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=97.68 E-value=0.0002 Score=66.11 Aligned_cols=97 Identities=15% Similarity=0.081 Sum_probs=64.8
Q ss_pred chhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecC---CCCCChhhHHHHHHHHHhhccCCcE
Q psy4654 402 RAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFAD---GLSPGFLGHKASYLKSLIQDHGVVI 476 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~---g~~~dp~~~K~~~L~~L~~~~~~~i 476 (559)
.+++.++++.++++|+.+.++|+.+.+....+..+|++.++. ++.++..+ ...++|..++ .+++.+ .....=
T Consensus 101 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~-~~~~~l--gi~~~~ 177 (235)
T 2om6_A 101 LEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFE-KVLNSF--EVKPEE 177 (235)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHH-HHHHHT--TCCGGG
T ss_pred CccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHH-HHHHHc--CCCccc
Confidence 578899999999999999999998733255667788888775 34455432 1234554443 233333 222233
Q ss_pred EEEeCC-c-cchhHHHhcCCCCCcEEEEcC
Q psy4654 477 HAAYGS-N-KDVSVYTSVGLKPRSIYIVGK 504 (559)
Q Consensus 477 ~aafGN-~-~DV~aYr~vGI~~~~If~i~~ 504 (559)
...+|| . +|+.+-+++|+.. ..++.
T Consensus 178 ~~~iGD~~~nDi~~a~~aG~~~---~~~~~ 204 (235)
T 2om6_A 178 SLHIGDTYAEDYQGARKVGMWA---VWINQ 204 (235)
T ss_dssp EEEEESCTTTTHHHHHHTTSEE---EEECT
T ss_pred eEEECCChHHHHHHHHHCCCEE---EEECC
Confidence 578999 6 8999999999953 44554
No 74
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=97.67 E-value=5.7e-05 Score=73.02 Aligned_cols=62 Identities=13% Similarity=0.305 Sum_probs=51.3
Q ss_pred CCCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC
Q psy4654 375 PRTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP 443 (559)
Q Consensus 375 ~~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP 443 (559)
...++|+||+||||.++. .+.+++.+.++.++++|+.++++|+|+-.......++|++.|++
T Consensus 15 ~~~~~v~~DlDGTLl~~~-------~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 15 DKIELFILDMDGTFYLDD-------SLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp GGCCEEEECCBTTTEETT-------EECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred cCCCEEEEcCcCcEEeCC-------EECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 346899999999999872 24567899999999999999999977766677777888887775
No 75
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=97.67 E-value=0.00036 Score=64.37 Aligned_cols=97 Identities=8% Similarity=-0.037 Sum_probs=61.1
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecC---CCCCChhhHHHHH--HHHHhhccCC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFAD---GLSPGFLGHKASY--LKSLIQDHGV 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~---g~~~dp~~~K~~~--L~~L~~~~~~ 474 (559)
.+.+|+.++++.+++ |+.+.++|..+....+ ..+++-+-.++.++..+ ...++|..|+... ++.+ .+..
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~---~~l~~l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~l--gi~~ 172 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFK---LSNAKLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKA--GIEK 172 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHH---HHHTTTCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHT--TCCG
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHH---HHHHhcCCccCEEEEccccCCCCCCHHHHHHHHHHHHhc--CCCc
Confidence 467899999999999 8999999987754333 33443333345555543 1245665444332 3333 2222
Q ss_pred cEEEEeCC-c-cchhHHHhcCCCCCcEEEEcCC
Q psy4654 475 VIHAAYGS-N-KDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 475 ~i~aafGN-~-~DV~aYr~vGI~~~~If~i~~~ 505 (559)
.=...+|| . +|+.+-+++|+. +..+++.
T Consensus 173 ~~~~~vGD~~~~Di~~a~~aG~~---~~~~~~~ 202 (240)
T 3smv_A 173 KDILHTAESLYHDHIPANDAGLV---SAWIYRR 202 (240)
T ss_dssp GGEEEEESCTTTTHHHHHHHTCE---EEEECTT
T ss_pred hhEEEECCCchhhhHHHHHcCCe---EEEEcCC
Confidence 23567888 5 899999999995 4455643
No 76
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=97.67 E-value=0.0001 Score=68.99 Aligned_cols=90 Identities=19% Similarity=0.149 Sum_probs=57.6
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--C--ceeEecCC---CCCChhhHHHHHHHHHhhcc
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--H--GLVSFADG---LSPGFLGHKASYLKSLIQDH 472 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~--G~L~lr~g---~~~dp~~~K~~~L~~L~~~~ 472 (559)
.+.+|+.++++.++++|+.+.++|+.+.... ...|.+ ++. + +.++..+. ..++|..++ .+++.+ ..
T Consensus 108 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~---~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~-~~~~~l--g~ 180 (247)
T 3dv9_A 108 ERMPGALEVLTKIKSEGLTPMVVTGSGQTSL---LDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYL-MALKKG--GF 180 (247)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSCC---C---HHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHH-HHHHHH--TC
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEcCCchHHH---HHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHH-HHHHHc--CC
Confidence 4679999999999999999999998765432 334555 654 2 44554432 234443333 233333 22
Q ss_pred CCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 473 GVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 473 ~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
...=...+|| .+|+.+.+++|+..
T Consensus 181 ~~~~~i~vGD~~~Di~~a~~aG~~~ 205 (247)
T 3dv9_A 181 KPNEALVIENAPLGVQAGVAAGIFT 205 (247)
T ss_dssp CGGGEEEEECSHHHHHHHHHTTSEE
T ss_pred ChhheEEEeCCHHHHHHHHHCCCeE
Confidence 2223577999 79999999999953
No 77
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=97.67 E-value=0.00017 Score=68.20 Aligned_cols=90 Identities=21% Similarity=0.148 Sum_probs=61.4
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCCc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
+.+|+.++++.++++|+.+..+|+.+. ..+...|++.|+. ++.++..+. ..++|..++. +++.+ .....
T Consensus 95 ~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~-~~~~~--g~~~~ 168 (241)
T 2hoq_A 95 EVPGARKVLIRLKELGYELGIITDGNP---VKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKK-ALKAF--NVKPE 168 (241)
T ss_dssp BCTTHHHHHHHHHHHTCEEEEEECSCH---HHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHH-HHHHH--TCCGG
T ss_pred CCccHHHHHHHHHHCCCEEEEEECCCc---hhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHH-HHHHc--CCCcc
Confidence 568999999999999999999998654 4456777787875 355555432 2344544432 33443 22222
Q ss_pred EEEEeCC-c-cchhHHHhcCCCC
Q psy4654 476 IHAAYGS-N-KDVSVYTSVGLKP 496 (559)
Q Consensus 476 i~aafGN-~-~DV~aYr~vGI~~ 496 (559)
=...+|| . +|+.+-+++|+..
T Consensus 169 ~~i~iGD~~~~Di~~a~~aG~~~ 191 (241)
T 2hoq_A 169 EALMVGDRLYSDIYGAKRVGMKT 191 (241)
T ss_dssp GEEEEESCTTTTHHHHHHTTCEE
T ss_pred cEEEECCCchHhHHHHHHCCCEE
Confidence 3578999 6 8999999999964
No 78
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=97.67 E-value=3.8e-05 Score=75.72 Aligned_cols=60 Identities=12% Similarity=0.265 Sum_probs=43.7
Q ss_pred eeEEEEEEeeCCCCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhH
Q psy4654 364 TSVDFYLAVVPPRTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQG 431 (559)
Q Consensus 364 t~~~~~i~v~~~~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~ 431 (559)
++-++| +....|+|+||+||||.+++.. .+.+...+.+++++++|+.++++|||+.....
T Consensus 11 ~~~~~~---~~~~~kli~~DlDGTLl~~~~~-----~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~ 70 (283)
T 3dao_A 11 HHENLY---FQGMIKLIATDIDGTLVKDGSL-----LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEF 70 (283)
T ss_dssp -----------CCCCEEEECCBTTTBSTTCS-----CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHH
T ss_pred hhhhhh---hccCceEEEEeCcCCCCCCCCC-----cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence 444444 5667899999999999987531 24567899999999999999999999976543
No 79
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=97.66 E-value=2.4e-05 Score=73.46 Aligned_cols=86 Identities=13% Similarity=0.189 Sum_probs=58.5
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCCc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
+.+|+.++++.++++|+.+.++|+.+. .++.+|++.|+. ++.++..+. ..++|..++ .+++.+ ++.
T Consensus 96 ~~~~~~~~l~~l~~~g~~~~i~Tn~~~----~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~-~~~~~~----~~~ 166 (220)
T 2zg6_A 96 LYDDTLEFLEGLKSNGYKLALVSNASP----RVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFG-FALAKV----GYP 166 (220)
T ss_dssp ECTTHHHHHHHHHTTTCEEEECCSCHH----HHHHHHHHHTCGGGCSEEC-----------CCHHH-HHHHHH----CSS
T ss_pred ECcCHHHHHHHHHHCCCEEEEEeCCcH----HHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHH-HHHHHc----CCC
Confidence 568999999999999999999999853 257788888875 455555432 133443333 334444 555
Q ss_pred EEEEeCC-cc-chhHHHhcCCCC
Q psy4654 476 IHAAYGS-NK-DVSVYTSVGLKP 496 (559)
Q Consensus 476 i~aafGN-~~-DV~aYr~vGI~~ 496 (559)
. ..+|| .. |+.+-+++|+..
T Consensus 167 ~-~~vgD~~~~Di~~a~~aG~~~ 188 (220)
T 2zg6_A 167 A-VHVGDIYELDYIGAKRSYVDP 188 (220)
T ss_dssp E-EEEESSCCCCCCCSSSCSEEE
T ss_pred e-EEEcCCchHhHHHHHHCCCeE
Confidence 5 88999 56 999999999863
No 80
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=97.65 E-value=5.5e-05 Score=72.49 Aligned_cols=50 Identities=20% Similarity=0.349 Sum_probs=41.6
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHH
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGR 432 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~ 432 (559)
.|+|+||+||||.+++. ...+...+.+++++++|..++++|||+......
T Consensus 3 ~kli~~DlDGTLl~~~~------~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~ 52 (231)
T 1wr8_A 3 IKAISIDIDGTITYPNR------MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEA 52 (231)
T ss_dssp CCEEEEESTTTTBCTTS------CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHH
T ss_pred eeEEEEECCCCCCCCCC------cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHH
Confidence 38999999999998753 356778999999999999999999998755433
No 81
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=97.65 E-value=6.8e-05 Score=78.53 Aligned_cols=92 Identities=22% Similarity=0.288 Sum_probs=62.3
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCce---eEecCC--------CCCChhhHHHHHHHHH
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGL---VSFADG--------LSPGFLGHKASYLKSL 468 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~---L~lr~g--------~~~dp~~~K~~~L~~L 468 (559)
++.+|+.++++.++++||++..+|+.+ ...++..+++.|+.+-. +...++ ...+ ..-|.+.++.+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~---~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~-~kpk~~~~~~~ 331 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGF---RRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIID-RAGKATALREF 331 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEE---HHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCC-HHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCc---HHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCC-CcchHHHHHHH
Confidence 468999999999999999999999854 45566677777875211 111111 0011 13477777766
Q ss_pred hhccCC--cEEEEeCC-ccchhHHHhcCCC
Q psy4654 469 IQDHGV--VIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 469 ~~~~~~--~i~aafGN-~~DV~aYr~vGI~ 495 (559)
....++ .=...+|| .+|+.+.+++|+.
T Consensus 332 ~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~ 361 (415)
T 3p96_A 332 AQRAGVPMAQTVAVGDGANDIDMLAAAGLG 361 (415)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEE
T ss_pred HHHcCcChhhEEEEECCHHHHHHHHHCCCe
Confidence 554443 23567899 7999999999984
No 82
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=97.65 E-value=0.00011 Score=67.45 Aligned_cols=90 Identities=9% Similarity=0.031 Sum_probs=59.5
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhh------CCCC--CceeEecC---CCCCChhhHHHHHHHHH
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQ------HNFP--HGLVSFAD---GLSPGFLGHKASYLKSL 468 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~q------hglP--~G~L~lr~---g~~~dp~~~K~~~L~~L 468 (559)
.+.+|+.++++.+++ |+.+.++|+.+. ..+..++++ .++. ++.++..+ ...++|..++ .+++.+
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~---~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~-~~~~~~ 163 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNP---YVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFL-EMIADS 163 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCH---HHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHH-HHHHHH
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCH---HHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHH-HHHHHh
Confidence 357899999999988 999999998764 335556666 5653 34455432 1244554444 234444
Q ss_pred hhccCCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 469 IQDHGVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 469 ~~~~~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
.....=...+|| ..|+.+.+++|+..
T Consensus 164 --~~~~~~~~~igD~~~Di~~a~~aG~~~ 190 (211)
T 2i6x_A 164 --GMKPEETLFIDDGPANVATAERLGFHT 190 (211)
T ss_dssp --CCCGGGEEEECSCHHHHHHHHHTTCEE
T ss_pred --CCChHHeEEeCCCHHHHHHHHHcCCEE
Confidence 222223567999 68999999999963
No 83
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.64 E-value=0.00017 Score=66.14 Aligned_cols=89 Identities=13% Similarity=0.072 Sum_probs=58.0
Q ss_pred ccchhHHHHHHHHHHCC-CeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCCCCCChhhHHHHHHHHHhhccCCcE
Q psy4654 400 KVRAGAVDIVRHWQELG-YLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADGLSPGFLGHKASYLKSLIQDHGVVI 476 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~G-Y~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~~i 476 (559)
.+.+|+.++++.++++| +++.++|..+. ......|++.++. ++.++..+ .++|..++. +++.+ .....=
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~---~~~~~~l~~~~~~~~f~~~~~~~--kpk~~~~~~-~~~~l--gi~~~~ 176 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDL---LDQENKLERSGLSPYFDHIEVMS--DKTEKEYLR-LLSIL--QIAPSE 176 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCH---HHHHHHHHHHTCGGGCSEEEEES--CCSHHHHHH-HHHHH--TCCGGG
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCch---HHHHHHHHHhCcHhhhheeeecC--CCCHHHHHH-HHHHh--CCCcce
Confidence 46789999999999999 99999996554 3445556665652 33444333 345544332 23333 222233
Q ss_pred EEEeCC-c-cchhHHHhcCCCC
Q psy4654 477 HAAYGS-N-KDVSVYTSVGLKP 496 (559)
Q Consensus 477 ~aafGN-~-~DV~aYr~vGI~~ 496 (559)
...+|| . +|+.+-+++|+..
T Consensus 177 ~i~iGD~~~~Di~~a~~aG~~~ 198 (234)
T 3ddh_A 177 LLMVGNSFKSDIQPVLSLGGYG 198 (234)
T ss_dssp EEEEESCCCCCCHHHHHHTCEE
T ss_pred EEEECCCcHHHhHHHHHCCCeE
Confidence 578999 5 8999999999854
No 84
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=97.63 E-value=8.3e-05 Score=71.73 Aligned_cols=62 Identities=13% Similarity=0.175 Sum_probs=52.2
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhh-CCCCC
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQ-HNFPH 444 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~q-hglP~ 444 (559)
..++|+||+||||.++. ...+++.+.++.++++|+.++++|+|+........+.|.+ .|++.
T Consensus 4 ~~k~v~fDlDGTL~~~~-------~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYLGK-------EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 66 (264)
T ss_dssp SCCEEEECCBTTTEETT-------EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred cCCEEEEeCCCeEEeCC-------EECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC
Confidence 35899999999999864 2346889999999999999999999998887777777777 78764
No 85
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.63 E-value=3.8e-05 Score=69.04 Aligned_cols=89 Identities=13% Similarity=0.097 Sum_probs=58.1
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC-C--CCChhhHHHHHHHHHhhccCC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG-L--SPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g-~--~~dp~~~K~~~L~~L~~~~~~ 474 (559)
.+.+++.++++.++++|+.+.++|+.+....+ .+++.++. ++.++..+. . .++|..++ .+++.+ ....
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~----~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~-~~~~~~--~i~~ 157 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT----ILKDLGVESYFTEILTSQSGFVRKPSPEAAT-YLLDKY--QLNS 157 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH----HHHHHTCGGGEEEEECGGGCCCCTTSSHHHH-HHHHHH--TCCG
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH----HHHHcCchhheeeEEecCcCCCCCCCcHHHH-HHHHHh--CCCc
Confidence 35789999999999999999999998754433 45555553 233444321 1 23343332 344444 2222
Q ss_pred cEEEEeCC-ccchhHHHhcCCC
Q psy4654 475 VIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 475 ~i~aafGN-~~DV~aYr~vGI~ 495 (559)
.=...+|| .+|+.+.+.+|+.
T Consensus 158 ~~~~~iGD~~nDi~~~~~aG~~ 179 (207)
T 2go7_A 158 DNTYYIGDRTLDVEFAQNSGIQ 179 (207)
T ss_dssp GGEEEEESSHHHHHHHHHHTCE
T ss_pred ccEEEECCCHHHHHHHHHCCCe
Confidence 33578999 7999999999986
No 86
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=97.63 E-value=6.8e-05 Score=73.54 Aligned_cols=61 Identities=8% Similarity=0.077 Sum_probs=52.4
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP 443 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP 443 (559)
..|+|+||+||||.++. .+.+++.+.++.++++|+.++++|+++........++|++.|++
T Consensus 13 ~~k~i~~D~DGtL~~~~-------~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~ 73 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKTYN-------GLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF 73 (284)
T ss_dssp GCSEEEECSBTTTEETT-------EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred cCCEEEEcCcCCcCcCC-------eeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence 35899999999999853 24578999999999999999999998877777888899888876
No 87
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=97.62 E-value=7.7e-05 Score=72.95 Aligned_cols=58 Identities=14% Similarity=0.240 Sum_probs=47.2
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP 443 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP 443 (559)
.|+|+||+||||.+++. .+.+...+.+++++++|+.+++.|||+.... ..++.+-+++
T Consensus 6 ~kli~fDlDGTLl~~~~------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~~~~~ 63 (290)
T 3dnp_A 6 KQLLALNIDGALLRSNG------KIHQATKDAIEYVKKKGIYVTLVTNRHFRSA---QKIAKSLKLD 63 (290)
T ss_dssp CCEEEECCCCCCSCTTS------CCCHHHHHHHHHHHHTTCEEEEBCSSCHHHH---HHHHHHTTCC
T ss_pred ceEEEEcCCCCCCCCCC------ccCHHHHHHHHHHHHCCCEEEEECCCChHHH---HHHHHHcCCC
Confidence 58999999999998754 3556789999999999999999999997654 4555566665
No 88
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=97.60 E-value=7.4e-05 Score=72.65 Aligned_cols=57 Identities=19% Similarity=0.366 Sum_probs=45.8
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCC
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNF 442 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhgl 442 (559)
.|+|+||+||||.+++.. +.+...+.+++++++|+.+++.|||+.... ..++.+.++
T Consensus 5 ~kli~fDlDGTLl~~~~~------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~l~~ 61 (279)
T 4dw8_A 5 YKLIVLDLDGTLTNSKKE------ISSRNRETLIRIQEQGIRLVLASGRPTYGI---VPLANELRM 61 (279)
T ss_dssp CCEEEECCCCCCSCTTSC------CCHHHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHHTTG
T ss_pred ceEEEEeCCCCCCCCCCc------cCHHHHHHHHHHHHCCCEEEEEcCCChHHH---HHHHHHhCC
Confidence 589999999999987542 456789999999999999999999997644 344555555
No 89
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=97.59 E-value=0.00025 Score=65.73 Aligned_cols=91 Identities=13% Similarity=0.094 Sum_probs=58.0
Q ss_pred cchhHHHHHHHHHHC-CCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCCCCCChhhHHHHHHHHHhhccC----
Q psy4654 401 VRAGAVDIVRHWQEL-GYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADGLSPGFLGHKASYLKSLIQDHG---- 473 (559)
Q Consensus 401 ~~~GA~elv~~l~~~-GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~---- 473 (559)
+.+|+.++++.++++ |+.+.++|+.+. ..+..+|++.++. ++.+...+.....+ .-+...++.+....+
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~~-k~~~~~~~~~~~~lg~~~~ 169 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFE---ASGRHKLKLPGIDHYFPFGAFADDALDRN-ELPHIALERARRMTGANYS 169 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCH---HHHHHHHHTTTCSTTCSCEECTTTCSSGG-GHHHHHHHHHHHHHCCCCC
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcH---HHHHHHHHHCCchhhcCcceecCCCcCcc-chHHHHHHHHHHHhCCCCC
Confidence 468999999999999 999999998764 4456678887764 23333333221111 112223232222112
Q ss_pred CcEEEEeCC-ccchhHHHhcCCC
Q psy4654 474 VVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 474 ~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
..=...+|| .+|+.+.+++|+.
T Consensus 170 ~~~~i~iGD~~~Di~~a~~aG~~ 192 (234)
T 2hcf_A 170 PSQIVIIGDTEHDIRCARELDAR 192 (234)
T ss_dssp GGGEEEEESSHHHHHHHHTTTCE
T ss_pred cccEEEECCCHHHHHHHHHCCCc
Confidence 233578999 6999999999986
No 90
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=97.59 E-value=0.00013 Score=67.72 Aligned_cols=118 Identities=11% Similarity=0.054 Sum_probs=70.1
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC-CCCChhhHHHHHHHHHhhccC-C-
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG-LSPGFLGHKASYLKSLIQDHG-V- 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g-~~~dp~~~K~~~L~~L~~~~~-~- 474 (559)
.+.+|+.++++.++++ +.+.++|+.+. ...+..|++.++. ++.++..+. ...+| |...++.+++..+ +
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp---~~~~~~~~~~~~g~~~ 175 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVS---HTQYKRLRDSGLFPFFKDIFVSEDTGFQKP---MKEYFNYVFERIPQFS 175 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCH---HHHHHHHHHTTCGGGCSEEEEGGGTTSCTT---CHHHHHHHHHTSTTCC
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCH---HHHHHHHHHcChHhhhheEEEecccCCCCC---ChHHHHHHHHHcCCCC
Confidence 4678999999999999 99999998765 3445566666664 444554432 12222 2233333333223 2
Q ss_pred -cEEEEeCC-c-cchhHHHhcCCCCCcEEEEcCCC--ccccccceecchhHHHHHHHHh
Q psy4654 475 -VIHAAYGS-N-KDVSVYTSVGLKPRSIYIVGKVS--KKHQSQATVLSDGYAAHLTALQ 528 (559)
Q Consensus 475 -~i~aafGN-~-~DV~aYr~vGI~~~~If~i~~~~--~~~~~~~~~~~~~Y~~hL~~l~ 528 (559)
.=...+|| . +|+.+-+++|+.. ..++... ......+....++.. .|.++.
T Consensus 176 ~~~~i~vGD~~~~Di~~a~~aG~~~---i~~~~~~~~~~~~~~ad~v~~~~~-el~~~l 230 (238)
T 3ed5_A 176 AEHTLIIGDSLTADIKGGQLAGLDT---CWMNPDMKPNVPEIIPTYEIRKLE-ELYHIL 230 (238)
T ss_dssp GGGEEEEESCTTTTHHHHHHTTCEE---EEECTTCCCCTTCCCCSEEESSGG-GHHHHH
T ss_pred hhHeEEECCCcHHHHHHHHHCCCEE---EEECCCCCCCcccCCCCeEECCHH-HHHHHH
Confidence 33577899 6 8999999999954 3455431 112223344556653 344443
No 91
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=97.58 E-value=0.00014 Score=68.71 Aligned_cols=90 Identities=19% Similarity=0.152 Sum_probs=59.2
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--C--ceeEecCC---CCCChhhHHHHHHHHHhhcc
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--H--GLVSFADG---LSPGFLGHKASYLKSLIQDH 472 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~--G~L~lr~g---~~~dp~~~K~~~L~~L~~~~ 472 (559)
.+.+|+.++++.++++|+.+.++|+.+... ....|++ ++. + +.++..+. ..++|..++. +++.+ ..
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~---~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~-~~~~l--g~ 181 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLS---LLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLM-ALKKG--GL 181 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHH---HHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHH-HHHHT--TC
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHH---HHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHH-HHHHc--CC
Confidence 467899999999999999999999877433 3344555 554 2 44554432 2344544432 33443 22
Q ss_pred CCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 473 GVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 473 ~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
...=...+|| .+|+.+-+++|+..
T Consensus 182 ~~~~~i~vGD~~~Di~~a~~aG~~~ 206 (243)
T 3qxg_A 182 KADEAVVIENAPLGVEAGHKAGIFT 206 (243)
T ss_dssp CGGGEEEEECSHHHHHHHHHTTCEE
T ss_pred CHHHeEEEeCCHHHHHHHHHCCCEE
Confidence 2223567999 79999999999954
No 92
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=97.58 E-value=0.0002 Score=68.00 Aligned_cols=90 Identities=11% Similarity=0.101 Sum_probs=60.5
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC-CceeEecCC---CCCChhhHHHHHHHHHhhccCCcE
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP-HGLVSFADG---LSPGFLGHKASYLKSLIQDHGVVI 476 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP-~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~~i 476 (559)
+.+|+.++++.++++|+++.++|+.+. ..++..|++.++. ++.++..+. ..++|..++. +++.+ .....=
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~---~~~~~~l~~~~l~~f~~~~~~~~~~~~Kp~p~~~~~-~~~~l--~~~~~~ 184 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPN---EAVQVLVEELFPGSFDFALGEKSGIRRKPAPDMTSE-CVKVL--GVPRDK 184 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHHHSTTTCSEEEEECTTSCCTTSSHHHHH-HHHHH--TCCGGG
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHHcCCcceeEEEecCCCCCCCCCHHHHHH-HHHHc--CCCHHH
Confidence 357899999999999999999998654 3455667766664 455555432 2355555543 33444 222223
Q ss_pred EEEeCC-ccchhHHHhcCCCC
Q psy4654 477 HAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 477 ~aafGN-~~DV~aYr~vGI~~ 496 (559)
...+|| .+|+.+-+++|+..
T Consensus 185 ~~~vGDs~~Di~~a~~aG~~~ 205 (240)
T 2hi0_A 185 CVYIGDSEIDIQTARNSEMDE 205 (240)
T ss_dssp EEEEESSHHHHHHHHHTTCEE
T ss_pred eEEEcCCHHHHHHHHHCCCeE
Confidence 567888 69999999999963
No 93
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=97.58 E-value=0.00014 Score=66.75 Aligned_cols=93 Identities=10% Similarity=0.040 Sum_probs=60.8
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCCc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
+.+|+.++++.+++.|+.+.++|+. ..+..+|++.++. ++.++..+. ..++|..++ .+++.+ .....
T Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~t~~-----~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~-~~~~~l--gi~~~ 163 (221)
T 2wf7_A 92 VYPGILQLLKDLRSNKIKIALASAS-----KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFI-AAAHAV--GVAPS 163 (221)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCCC-----TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHH-HHHHHT--TCCGG
T ss_pred CCCCHHHHHHHHHHCCCeEEEEcCc-----HHHHHHHHHcChHHHcceEeccccCCCCCCChHHHH-HHHHHc--CCChh
Confidence 4688999999999999999999987 2345677777764 333433322 123443333 234444 22223
Q ss_pred EEEEeCC-ccchhHHHhcCCCCCcEEEEcC
Q psy4654 476 IHAAYGS-NKDVSVYTSVGLKPRSIYIVGK 504 (559)
Q Consensus 476 i~aafGN-~~DV~aYr~vGI~~~~If~i~~ 504 (559)
=...||| .+|+.+.+++|+. +..+|.
T Consensus 164 ~~i~iGD~~nDi~~a~~aG~~---~~~~~~ 190 (221)
T 2wf7_A 164 ESIGLEDSQAGIQAIKDSGAL---PIGVGR 190 (221)
T ss_dssp GEEEEESSHHHHHHHHHHTCE---EEEESC
T ss_pred HeEEEeCCHHHHHHHHHCCCE---EEEECC
Confidence 3578899 7999999999996 445554
No 94
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=97.57 E-value=0.00015 Score=69.65 Aligned_cols=88 Identities=9% Similarity=0.020 Sum_probs=58.5
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCCc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
+.+|+.++++.++++|+.+..+|++.. ....|++.|+. ++.++..+. ..++|+.|.. +++.+ .+.-.
T Consensus 96 ~~pg~~~ll~~L~~~g~~i~i~t~~~~-----~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~-a~~~l--g~~p~ 167 (243)
T 4g9b_A 96 VLPGIRSLLADLRAQQISVGLASVSLN-----APTILAALELREFFTFCADASQLKNSKPDPEIFLA-ACAGL--GVPPQ 167 (243)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCCCTT-----HHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHH-HHHHH--TSCGG
T ss_pred ccccHHHHHHhhhcccccceecccccc-----hhhhhhhhhhccccccccccccccCCCCcHHHHHH-HHHHc--CCChH
Confidence 578999999999999999999998753 23346777764 333443322 3566766653 34444 22222
Q ss_pred EEEEeCC-ccchhHHHhcCCCC
Q psy4654 476 IHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 476 i~aafGN-~~DV~aYr~vGI~~ 496 (559)
=...+|| ..||.+-+++|+.+
T Consensus 168 e~l~VgDs~~di~aA~~aG~~~ 189 (243)
T 4g9b_A 168 ACIGIEDAQAGIDAINASGMRS 189 (243)
T ss_dssp GEEEEESSHHHHHHHHHHTCEE
T ss_pred HEEEEcCCHHHHHHHHHcCCEE
Confidence 2345678 68999999999953
No 95
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=97.57 E-value=5.2e-05 Score=69.32 Aligned_cols=91 Identities=9% Similarity=0.179 Sum_probs=55.8
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhh-CCCC--CceeEecC---CCCCChhhHHHHHHHHHhhccC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQ-HNFP--HGLVSFAD---GLSPGFLGHKASYLKSLIQDHG 473 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~q-hglP--~G~L~lr~---g~~~dp~~~K~~~L~~L~~~~~ 473 (559)
.+.+|+.++++.++++|+.+.++|+.+....+. ++.+ .|+. ++.++..+ ...++|..++ .+++.+ ...
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~---~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~-~~~~~~--~~~ 164 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTF---WPEEYPEIRDAADHIYLSQDLGMRKPEARIYQ-HVLQAE--GFS 164 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSC---CGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHH-HHHHHH--TCC
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHH---HHHhccChhhheeeEEEecccCCCCCCHHHHH-HHHHHc--CCC
Confidence 467999999999999999999999987544221 1222 1221 23344332 1234453443 344444 222
Q ss_pred CcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 474 VVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 474 ~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
..=...+|| ..|+.+-+++|+..
T Consensus 165 ~~~~~~vgD~~~Di~~a~~aG~~~ 188 (206)
T 2b0c_A 165 PSDTVFFDDNADNIEGANQLGITS 188 (206)
T ss_dssp GGGEEEEESCHHHHHHHHTTTCEE
T ss_pred HHHeEEeCCCHHHHHHHHHcCCeE
Confidence 223456788 68999999999963
No 96
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=97.56 E-value=7e-05 Score=72.86 Aligned_cols=58 Identities=17% Similarity=0.375 Sum_probs=38.6
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP 443 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP 443 (559)
.|+|+||+||||.+++. ...+...+.+++++++|+.+++.|||+.... ..++.+.+++
T Consensus 5 ~kli~~DlDGTLl~~~~------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~l~~~ 62 (279)
T 3mpo_A 5 IKLIAIDIDGTLLNEKN------ELAQATIDAVQAAKAQGIKVVLCTGRPLTGV---QPYLDAMDID 62 (279)
T ss_dssp CCEEEECC-----------------CHHHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHHTTCC
T ss_pred eEEEEEcCcCCCCCCCC------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHHcCCC
Confidence 58999999999998864 2556788999999999999999999997543 4556666664
No 97
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=97.55 E-value=0.00023 Score=66.01 Aligned_cols=89 Identities=13% Similarity=0.168 Sum_probs=59.3
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~ 474 (559)
.+.+|+.++++.++++ +.+.++|+.+. ..+...|++.++. ++.++..+. ..++|..++ .+++.+ ....
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~---~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~-~~~~~~--~~~~ 172 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDT---EQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFE-LALKKA--GVKG 172 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCH---HHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHH-HHHHHH--TCCG
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCH---HHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHH-HHHHHc--CCCc
Confidence 3678899999999999 99999998765 3455667777764 344544321 234443333 233443 2222
Q ss_pred cEEEEeCC-c-cchhHHHhcCCC
Q psy4654 475 VIHAAYGS-N-KDVSVYTSVGLK 495 (559)
Q Consensus 475 ~i~aafGN-~-~DV~aYr~vGI~ 495 (559)
.=...+|| . +|+.+-+++|+.
T Consensus 173 ~~~~~vGD~~~~Di~~a~~aG~~ 195 (234)
T 3u26_A 173 EEAVYVGDNPVKDCGGSKNLGMT 195 (234)
T ss_dssp GGEEEEESCTTTTHHHHHTTTCE
T ss_pred hhEEEEcCCcHHHHHHHHHcCCE
Confidence 33577999 5 899999999985
No 98
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=97.55 E-value=0.0001 Score=70.04 Aligned_cols=62 Identities=13% Similarity=0.296 Sum_probs=49.4
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCC
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPH 444 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~ 444 (559)
..|+|+||+||||.++.. ..+++.+.++.++++|+.++++|++.........+.|.+.|++.
T Consensus 6 ~ik~i~fDlDGTLld~~~-------~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 6 ALKAVLVDLNGTLHIEDA-------AVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp CCCEEEEESSSSSCC----------CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred hCCEEEEeCcCcEEeCCE-------eCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 358999999999998643 34567888999999999999999888777777778888777653
No 99
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=97.55 E-value=6.9e-05 Score=70.60 Aligned_cols=94 Identities=14% Similarity=0.118 Sum_probs=61.3
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecCC---CCCChhhHHHHHHHHHhhccCCcEE
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFADG---LSPGFLGHKASYLKSLIQDHGVVIH 477 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~~i~ 477 (559)
+.+|+.++++.+++. +.+.++|..+. ......|++.|+.++.++..+. ..++|..++. +++.+ .....=.
T Consensus 121 ~~~~~~~~l~~l~~~-~~~~i~s~~~~---~~~~~~l~~~g~~f~~~~~~~~~~~~kp~~~~~~~-~~~~l--gi~~~~~ 193 (254)
T 3umc_A 121 PWPDTLAGMHALKAD-YWLAALSNGNT---ALMLDVARHAGLPWDMLLCADLFGHYKPDPQVYLG-ACRLL--DLPPQEV 193 (254)
T ss_dssp ECTTHHHHHHHHTTT-SEEEECCSSCH---HHHHHHHHHHTCCCSEECCHHHHTCCTTSHHHHHH-HHHHH--TCCGGGE
T ss_pred CCccHHHHHHHHHhc-CeEEEEeCCCH---HHHHHHHHHcCCCcceEEeecccccCCCCHHHHHH-HHHHc--CCChHHE
Confidence 468999999999875 99999998764 3455667777877665554431 2344433332 33333 2222235
Q ss_pred EEeCC-ccchhHHHhcCCCCCcEEEEcC
Q psy4654 478 AAYGS-NKDVSVYTSVGLKPRSIYIVGK 504 (559)
Q Consensus 478 aafGN-~~DV~aYr~vGI~~~~If~i~~ 504 (559)
..+|| .+|+.+-+++|+. +..+++
T Consensus 194 ~~iGD~~~Di~~a~~aG~~---~~~~~~ 218 (254)
T 3umc_A 194 MLCAAHNYDLKAARALGLK---TAFIAR 218 (254)
T ss_dssp EEEESCHHHHHHHHHTTCE---EEEECC
T ss_pred EEEcCchHhHHHHHHCCCe---EEEEec
Confidence 66788 7999999999994 456663
No 100
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=97.54 E-value=0.0001 Score=72.92 Aligned_cols=58 Identities=14% Similarity=0.304 Sum_probs=45.5
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP 443 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP 443 (559)
.|.|+||+||||.+++. .+.+...+.+++++++|..++++|||+..... .++.+.+++
T Consensus 5 ~kli~~DlDGTLl~~~~------~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~---~~~~~l~l~ 62 (282)
T 1rkq_A 5 IKLIAIDMDGTLLLPDH------TISPAVKNAIAAARARGVNVVLTTGRPYAGVH---NYLKELHME 62 (282)
T ss_dssp CCEEEECCCCCCSCTTS------CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTH---HHHHHTTCC
T ss_pred ceEEEEeCCCCCCCCCC------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH---HHHHHhCCC
Confidence 38999999999998753 24566889999999999999999999975543 444555554
No 101
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=97.53 E-value=0.00013 Score=72.16 Aligned_cols=60 Identities=15% Similarity=0.151 Sum_probs=45.6
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCC
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPH 444 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~ 444 (559)
..+.|+||+||||.+++.. ..+...+.+++++++|+.++++|||+... .+.++.+.+++.
T Consensus 8 ~~~li~~DlDGTLl~~~~~------~~~~~~~~l~~l~~~G~~~~iaTGR~~~~---~~~~~~~l~~~~ 67 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDSHSY------DWQPAAPWLTRLREANVPVILCSSKTSAE---MLYLQKTLGLQG 67 (275)
T ss_dssp CCEEEEEECTTTTSCSSCC------SCCTTHHHHHHHHHTTCCEEEECSSCHHH---HHHHHHHTTCTT
T ss_pred CceEEEEeCCCCCCCCCCc------CCHHHHHHHHHHHHCCCeEEEEcCCCHHH---HHHHHHHcCCCC
Confidence 3589999999999986532 12336899999999999999999998654 445566666643
No 102
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=97.51 E-value=0.00011 Score=71.65 Aligned_cols=90 Identities=12% Similarity=0.028 Sum_probs=59.6
Q ss_pred ccchhHHHHHHHHHHC-CCeEEEEecCCchhhHHHHHHHhhCCCC-CceeEecCC---CCCChhhHHHHHHHHHhhcc--
Q psy4654 400 KVRAGAVDIVRHWQEL-GYLIIYITGRPDMQQGRVLSWLSQHNFP-HGLVSFADG---LSPGFLGHKASYLKSLIQDH-- 472 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~-GY~IIYLTaRp~~~~~~T~~WL~qhglP-~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~-- 472 (559)
.+.+|+.++++.++++ |+.+.++|+.+.. .+..+|++.++. +..++..+. ..++|..++ .+++.+ ..
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~---~~~~~l~~~~l~~f~~i~~~~~~~~~kp~~~~~~-~~~~~l--gi~~ 187 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRD---MAKKWFDILKIKRPEYFITANDVKQGKPHPEPYL-KGRNGL--GFPI 187 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHH---HHHHHHHHHTCCCCSSEECGGGCSSCTTSSHHHH-HHHHHT--TCCC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHH---HHHHHHHHcCCCccCEEEEcccCCCCCCChHHHH-HHHHHc--CCCc
Confidence 4578999999999999 9999999987653 456677776665 333443332 133444332 223333 12
Q ss_pred -----CCcEEEEeCC-ccchhHHHhcCCC
Q psy4654 473 -----GVVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 473 -----~~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
...=...||| .+|+.+.+++|+.
T Consensus 188 ~~~~~~~~~~i~~GDs~nDi~~a~~AG~~ 216 (275)
T 2qlt_A 188 NEQDPSKSKVVVFEDAPAGIAAGKAAGCK 216 (275)
T ss_dssp CSSCGGGSCEEEEESSHHHHHHHHHTTCE
T ss_pred cccCCCcceEEEEeCCHHHHHHHHHcCCE
Confidence 1223688999 6999999999985
No 103
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=97.50 E-value=0.00024 Score=68.49 Aligned_cols=88 Identities=9% Similarity=0.024 Sum_probs=58.3
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCCc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
+.+|+.++++.++++|+.+...|+++. .+..|++.|+. ++.++..+. ..++|+.|.. +++.+ .+...
T Consensus 117 ~~p~~~~ll~~Lk~~g~~i~i~~~~~~-----~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~-a~~~l--g~~p~ 188 (250)
T 4gib_A 117 ILPGIESLLIDVKSNNIKIGLSSASKN-----AINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLM-SAKGL--NVNPQ 188 (250)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT-----HHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHH-HHHHH--TCCGG
T ss_pred cchhHHHHHHHHHhcccccccccccch-----hhhHhhhcccccccceeecccccCCCCCcHHHHHH-HHHHh--CCChH
Confidence 568999999999999999988877643 34557777774 344554432 2456755554 34444 22111
Q ss_pred EEEEeCC-ccchhHHHhcCCCC
Q psy4654 476 IHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 476 i~aafGN-~~DV~aYr~vGI~~ 496 (559)
=...+|| ..|+.+-+++|+.+
T Consensus 189 e~l~VGDs~~Di~aA~~aG~~~ 210 (250)
T 4gib_A 189 NCIGIEDASAGIDAINSANMFS 210 (250)
T ss_dssp GEEEEESSHHHHHHHHHTTCEE
T ss_pred HeEEECCCHHHHHHHHHcCCEE
Confidence 1344677 68999999999954
No 104
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=97.49 E-value=0.00014 Score=70.08 Aligned_cols=48 Identities=21% Similarity=0.447 Sum_probs=40.6
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhh
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQ 430 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~ 430 (559)
.|+|+||+||||.+++. ...+...+.+++++++|+.++..|||+....
T Consensus 3 ~kli~~DlDGTLl~~~~------~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~ 50 (258)
T 2pq0_A 3 RKIVFFDIDGTLLDEQK------QLPLSTIEAVRRLKQSGVYVAIATGRAPFMF 50 (258)
T ss_dssp CCEEEECTBTTTBCTTS------CCCHHHHHHHHHHHHTTCEEEEECSSCGGGS
T ss_pred ceEEEEeCCCCCcCCCC------ccCHHHHHHHHHHHHCCCEEEEECCCChHHH
Confidence 48999999999998763 2456688999999999999999999997544
No 105
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=97.49 E-value=8.9e-05 Score=71.45 Aligned_cols=47 Identities=19% Similarity=0.293 Sum_probs=40.4
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchh
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQ 429 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~ 429 (559)
.|+|+||+||||.+++.. ..+...+.+++++++|+.+++.|||+...
T Consensus 5 ~kli~fDlDGTLl~~~~~------i~~~~~~al~~l~~~G~~~~iaTGR~~~~ 51 (274)
T 3fzq_A 5 YKLLILDIDGTLRDEVYG------IPESAKHAIRLCQKNHCSVVICTGRSMGT 51 (274)
T ss_dssp CCEEEECSBTTTBBTTTB------CCHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred ceEEEEECCCCCCCCCCc------CCHHHHHHHHHHHHCCCEEEEEeCCChHH
Confidence 389999999999988643 45668899999999999999999998644
No 106
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=97.49 E-value=0.00013 Score=72.61 Aligned_cols=61 Identities=15% Similarity=0.318 Sum_probs=51.8
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP 443 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP 443 (559)
..|+|+||+||||.++. .+.+++.+.++.++++|+.++++|+|+..........|++.|++
T Consensus 20 ~~k~i~~D~DGTL~~~~-------~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 20 RAQGVLFDCDGVLWNGE-------RAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp HCSEEEECSBTTTEETT-------EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred hCCEEEECCCCcEecCC-------ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 35899999999998753 35678999999999999999999988877777788888887776
No 107
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=97.48 E-value=0.00035 Score=65.55 Aligned_cols=92 Identities=11% Similarity=0.064 Sum_probs=63.3
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHH---hhCCCC--CceeEecC---CCCCChhhHHHHHHHHHhhcc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWL---SQHNFP--HGLVSFAD---GLSPGFLGHKASYLKSLIQDH 472 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL---~qhglP--~G~L~lr~---g~~~dp~~~K~~~L~~L~~~~ 472 (559)
+.+|+.++++.++++ +.+..+|+.+....+...+.| +..++. ++.++..+ ...++|..++. +++.+ ..
T Consensus 113 ~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~-~~~~~--g~ 188 (229)
T 4dcc_A 113 IPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKA-VTEDA--GI 188 (229)
T ss_dssp CCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHH-HHHHH--TC
T ss_pred ccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHH-HHHHc--CC
Confidence 468999999999998 999999999887777666777 666652 34444432 12455554443 33443 22
Q ss_pred CCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 473 GVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 473 ~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
...=...+|| .+|+.+-+++|+..
T Consensus 189 ~~~~~~~vGD~~~Di~~a~~aG~~~ 213 (229)
T 4dcc_A 189 DPKETFFIDDSEINCKVAQELGIST 213 (229)
T ss_dssp CGGGEEEECSCHHHHHHHHHTTCEE
T ss_pred CHHHeEEECCCHHHHHHHHHcCCEE
Confidence 2233567899 69999999999953
No 108
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=97.48 E-value=0.00012 Score=68.51 Aligned_cols=95 Identities=13% Similarity=0.057 Sum_probs=61.5
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecCC---CCCChhhHHHHHHHHHhhccCCcE
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFADG---LSPGFLGHKASYLKSLIQDHGVVI 476 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~~i 476 (559)
.+.+|+.++++.++++ +.+.++|..+. +.....|++.|+.++.++..+. ..++|..++. +++.+ .....=
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~---~~~~~~l~~~~~~f~~~~~~~~~~~~kp~~~~~~~-~~~~l--gi~~~~ 188 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNT---SLLLDMAKNAGIPWDVIIGSDINRKYKPDPQAYLR-TAQVL--GLHPGE 188 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCH---HHHHHHHHHHTCCCSCCCCHHHHTCCTTSHHHHHH-HHHHT--TCCGGG
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCH---HHHHHHHHhCCCCeeEEEEcCcCCCCCCCHHHHHH-HHHHc--CCChHH
Confidence 3578999999999986 99999998654 3455667777776555554321 2344433332 22222 122223
Q ss_pred EEEeCC-ccchhHHHhcCCCCCcEEEEcC
Q psy4654 477 HAAYGS-NKDVSVYTSVGLKPRSIYIVGK 504 (559)
Q Consensus 477 ~aafGN-~~DV~aYr~vGI~~~~If~i~~ 504 (559)
...+|| .+|+.+-+++|+. +..+++
T Consensus 189 ~~~iGD~~~Di~~a~~aG~~---~~~~~~ 214 (254)
T 3umg_A 189 VMLAAAHNGDLEAAHATGLA---TAFILR 214 (254)
T ss_dssp EEEEESCHHHHHHHHHTTCE---EEEECC
T ss_pred EEEEeCChHhHHHHHHCCCE---EEEEec
Confidence 467888 7999999999994 566664
No 109
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=97.47 E-value=0.00023 Score=70.32 Aligned_cols=59 Identities=20% Similarity=0.313 Sum_probs=46.2
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCC
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPH 444 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~ 444 (559)
.|+|+||+||||.+++.. ..+...+.+++++++|+.++.+|||+... +...+.+.+++.
T Consensus 4 ikli~~DlDGTLl~~~~~------i~~~~~~al~~l~~~G~~~~iaTGR~~~~---~~~~~~~l~~~~ 62 (288)
T 1nrw_A 4 MKLIAIDLDGTLLNSKHQ------VSLENENALRQAQRDGIEVVVSTGRAHFD---VMSIFEPLGIKT 62 (288)
T ss_dssp CCEEEEECCCCCSCTTSC------CCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHGGGTCCC
T ss_pred eEEEEEeCCCCCCCCCCc------cCHHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHHHcCCCC
Confidence 489999999999987543 34567889999999999999999998654 344566656653
No 110
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=97.46 E-value=0.00048 Score=65.37 Aligned_cols=87 Identities=16% Similarity=0.099 Sum_probs=58.5
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCCCCCChhhHHHHHHHHHhhccCCcEEE
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADGLSPGFLGHKASYLKSLIQDHGVVIHA 478 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~~i~a 478 (559)
+.+|+.++++.++ +|+.+.++|+.+.. .+...|++.++. ++.++..+ .++|..++. +++.+ .....=..
T Consensus 113 ~~~~~~~~l~~l~-~~~~~~i~t~~~~~---~~~~~l~~~~l~~~f~~i~~~~--kp~~~~~~~-~~~~l--~~~~~~~i 183 (251)
T 2pke_A 113 VIAGVREAVAAIA-ADYAVVLITKGDLF---HQEQKIEQSGLSDLFPRIEVVS--EKDPQTYAR-VLSEF--DLPAERFV 183 (251)
T ss_dssp BCTTHHHHHHHHH-TTSEEEEEEESCHH---HHHHHHHHHSGGGTCCCEEEES--CCSHHHHHH-HHHHH--TCCGGGEE
T ss_pred cCccHHHHHHHHH-CCCEEEEEeCCCHH---HHHHHHHHcCcHHhCceeeeeC--CCCHHHHHH-HHHHh--CcCchhEE
Confidence 4688899999998 89999999987643 345566666653 34444443 456655443 33444 22333357
Q ss_pred EeCC-c-cchhHHHhcCCCC
Q psy4654 479 AYGS-N-KDVSVYTSVGLKP 496 (559)
Q Consensus 479 afGN-~-~DV~aYr~vGI~~ 496 (559)
.+|| . +|+.+-+++|+..
T Consensus 184 ~iGD~~~~Di~~a~~aG~~~ 203 (251)
T 2pke_A 184 MIGNSLRSDVEPVLAIGGWG 203 (251)
T ss_dssp EEESCCCCCCHHHHHTTCEE
T ss_pred EECCCchhhHHHHHHCCCEE
Confidence 8899 7 9999999999964
No 111
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=97.46 E-value=0.0001 Score=71.25 Aligned_cols=48 Identities=25% Similarity=0.446 Sum_probs=39.5
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchh
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQ 429 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~ 429 (559)
.|+|+||+||||.+++ +....+...+.+++++++|+.+++.|||+...
T Consensus 12 iKli~~DlDGTLl~~~-----~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~ 59 (268)
T 3r4c_A 12 IKVLLLDVDGTLLSFE-----THKVSQSSIDALKKVHDSGIKIVIATGRAASD 59 (268)
T ss_dssp CCEEEECSBTTTBCTT-----TCSCCHHHHHHHHHHHHTTCEEEEECSSCTTC
T ss_pred eEEEEEeCCCCCcCCC-----CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 4899999999999842 11345668999999999999999999998543
No 112
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=97.45 E-value=0.00018 Score=66.19 Aligned_cols=89 Identities=12% Similarity=0.086 Sum_probs=59.7
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~ 474 (559)
.+.+|+.++++.++++ +++.++|+.+. ..++.+|++.|+. ++.++..+. ..++|..++ .+++.+ ....
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~---~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~-~~~~~~--~~~~ 155 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRR---NELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLL-TALEKV--NVAP 155 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCH---HHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHH-HHHHHT--TCCG
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCH---HHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHH-HHHHHc--CCCc
Confidence 4678999999999999 99999998753 4567778887764 234444432 123343333 334444 2222
Q ss_pred cEEEEeCC-ccchhHHHhcCCC
Q psy4654 475 VIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 475 ~i~aafGN-~~DV~aYr~vGI~ 495 (559)
.=...+|| .+|+.+-+++|+.
T Consensus 156 ~~~i~vGD~~~Di~~a~~aG~~ 177 (209)
T 2hdo_A 156 QNALFIGDSVSDEQTAQAANVD 177 (209)
T ss_dssp GGEEEEESSHHHHHHHHHHTCE
T ss_pred ccEEEECCChhhHHHHHHcCCe
Confidence 33567888 7999999999985
No 113
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=97.41 E-value=0.00051 Score=71.13 Aligned_cols=93 Identities=8% Similarity=0.068 Sum_probs=58.7
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecC---CchhhHHHHHHHhhCCCCCceeEecC---CCCCChhhHHHHHHHHHhhccCC
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGR---PDMQQGRVLSWLSQHNFPHGLVSFAD---GLSPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaR---p~~~~~~T~~WL~qhglP~G~L~lr~---g~~~dp~~~K~~~L~~L~~~~~~ 474 (559)
+.+|+.++++.|+++||++.++|.. ...........+....-.++.++..+ ...++|+.|.. +++.+ ....
T Consensus 101 ~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~-~~~~l--g~~p 177 (555)
T 3i28_A 101 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKF-LLDTL--KASP 177 (555)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHH-HHHHH--TCCG
T ss_pred cChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHH-HHHHc--CCCh
Confidence 5789999999999999999999996 33344444444332222345566543 23566655553 34444 2222
Q ss_pred cEEEEeCC-ccchhHHHhcCCCC
Q psy4654 475 VIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 475 ~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
.=...+|| ..|+.+-+++|+..
T Consensus 178 ~~~~~v~D~~~di~~a~~aG~~~ 200 (555)
T 3i28_A 178 SEVVFLDDIGANLKPARDLGMVT 200 (555)
T ss_dssp GGEEEEESCHHHHHHHHHHTCEE
T ss_pred hHEEEECCcHHHHHHHHHcCCEE
Confidence 22344588 68999999999864
No 114
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=97.40 E-value=0.00018 Score=70.49 Aligned_cols=53 Identities=15% Similarity=0.198 Sum_probs=41.6
Q ss_pred eeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHH
Q psy4654 378 EVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWL 437 (559)
Q Consensus 378 k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL 437 (559)
|+|+||+||||.+++.. +.+...+.+++ +++|+.++++|||+........+.|
T Consensus 3 kli~~DlDGTLl~~~~~------i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l 55 (268)
T 1nf2_A 3 RVFVFDLDGTLLNDNLE------ISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKY 55 (268)
T ss_dssp CEEEEECCCCCSCTTSC------CCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHH
T ss_pred cEEEEeCCCcCCCCCCc------cCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHh
Confidence 78999999999987532 44567899999 9999999999999976544433333
No 115
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=97.38 E-value=0.00017 Score=72.39 Aligned_cols=52 Identities=21% Similarity=0.377 Sum_probs=42.2
Q ss_pred CeeEEEeeccceecc-ccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHH
Q psy4654 377 TEVVVFSVDGSFTAS-VSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVL 434 (559)
Q Consensus 377 ~k~VIfDIDGTlt~s-d~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~ 434 (559)
.|+|+||+||||.++ +. .+.+.+.+.+++++++|..++++|||+........
T Consensus 27 ikli~~DlDGTLl~~~~~------~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~ 79 (301)
T 2b30_A 27 IKLLLIDFDGTLFVDKDI------KVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAF 79 (301)
T ss_dssp CCEEEEETBTTTBCCTTT------CSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHH
T ss_pred ccEEEEECCCCCcCCCCC------ccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHh
Confidence 389999999999987 43 24566889999999999999999999965544333
No 116
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=97.37 E-value=0.00018 Score=65.76 Aligned_cols=51 Identities=22% Similarity=0.249 Sum_probs=37.7
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCc--hhhHHHHHHHhhC--CCCCceeEecC
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPD--MQQGRVLSWLSQH--NFPHGLVSFAD 451 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~--~~~~~T~~WL~qh--glP~G~L~lr~ 451 (559)
++.+||.++++.|++ ++++.++|++.. .....+..||.++ .+++..+++.+
T Consensus 69 ~~~pg~~e~L~~L~~-~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~ 123 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNE-HYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCG 123 (180)
T ss_dssp CBCTTHHHHHHHHTT-TSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECS
T ss_pred CCCcCHHHHHHHHHh-cCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeC
Confidence 467999999999988 499999999843 2245789999986 44555566553
No 117
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=97.36 E-value=0.00016 Score=70.86 Aligned_cols=46 Identities=15% Similarity=0.268 Sum_probs=40.4
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCch
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDM 428 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~ 428 (559)
.|.|+||+||||.+++.. +.+...+.+++++++|+.++++|||+..
T Consensus 4 ~kli~~DlDGTLl~~~~~------i~~~~~~~l~~l~~~g~~~~iaTGR~~~ 49 (246)
T 3f9r_A 4 RVLLLFDVDGTLTPPRLC------QTDEMRALIKRARGAGFCVGTVGGSDFA 49 (246)
T ss_dssp SEEEEECSBTTTBSTTSC------CCHHHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred ceEEEEeCcCCcCCCCCc------cCHHHHHHHHHHHHCCCEEEEECCCCHH
Confidence 489999999999987542 4567899999999999999999999976
No 118
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=97.32 E-value=0.00019 Score=69.64 Aligned_cols=46 Identities=20% Similarity=0.444 Sum_probs=38.9
Q ss_pred eeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchh
Q psy4654 378 EVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQ 429 (559)
Q Consensus 378 k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~ 429 (559)
|+|+||+||||.+++.. ...+...+.++.++++|+.++.+|||+ ..
T Consensus 3 kli~~DlDGTLl~~~~~-----~i~~~~~~al~~l~~~G~~~~iaTGR~-~~ 48 (261)
T 2rbk_A 3 KALFFDIDGTLVSFETH-----RIPSSTIEALEAAHAKGLKIFIATGRP-KA 48 (261)
T ss_dssp CEEEECSBTTTBCTTTS-----SCCHHHHHHHHHHHHTTCEEEEECSSC-GG
T ss_pred cEEEEeCCCCCcCCCCC-----cCCHHHHHHHHHHHHCCCEEEEECCCh-HH
Confidence 89999999999987632 134668899999999999999999999 54
No 119
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=97.32 E-value=0.00036 Score=66.13 Aligned_cols=64 Identities=16% Similarity=0.237 Sum_probs=44.8
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP 443 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP 443 (559)
.|+|+||+||||.++. ..+-.+.+++++.++.++++|+.++++|++...........|.+.|++
T Consensus 12 ~k~i~fDlDGTLl~s~---~~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 12 VRGVLLDISGVLYDSG---AGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp CCEEEECCBTTTEECC---TTTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEeCCCeEEecC---CCCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 5899999999999874 001124466788899999999999999944433344445555555553
No 120
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=97.31 E-value=0.00032 Score=65.19 Aligned_cols=60 Identities=13% Similarity=0.262 Sum_probs=43.9
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP 443 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP 443 (559)
.|+|+||+||||.++... .+.+.+.++.++++|..++++|++.........+.+.+.|++
T Consensus 3 ~k~i~fDlDGTLl~~~~~-------~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 3 IKNVICDIDGVLMHDNVA-------VPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp CCEEEEECBTTTEETTEE-------CTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred ccEEEEcCcceEEeCCEe-------CcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 489999999999987532 233478899999999999999955544444555556556654
No 121
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=97.30 E-value=0.00021 Score=71.10 Aligned_cols=47 Identities=21% Similarity=0.288 Sum_probs=39.4
Q ss_pred CeeEEEeeccceeccccccCCCcccchh-HHHHHHHHHHCCCeEEEEecCCchh
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAG-AVDIVRHWQELGYLIIYITGRPDMQ 429 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~G-A~elv~~l~~~GY~IIYLTaRp~~~ 429 (559)
.|+|+||+||||.+++.. ..+. ..+.+++++++|+.++++|||+...
T Consensus 37 iKli~fDlDGTLld~~~~------i~~~~~~~al~~l~~~G~~~~iaTGR~~~~ 84 (304)
T 3l7y_A 37 VKVIATDMDGTFLNSKGS------YDHNRFQRILKQLQERDIRFVVASSNPYRQ 84 (304)
T ss_dssp CSEEEECCCCCCSCTTSC------CCHHHHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred eEEEEEeCCCCCCCCCCc------cCHHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 599999999999987532 3444 6799999999999999999998643
No 122
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=97.30 E-value=0.00051 Score=72.73 Aligned_cols=115 Identities=10% Similarity=0.108 Sum_probs=73.1
Q ss_pred eCCCCeeEEEeeccceecccc----c----cCCC---cccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCC
Q psy4654 373 VPPRTEVVVFSVDGSFTASVS----V----TGRD---PKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHN 441 (559)
Q Consensus 373 ~~~~~k~VIfDIDGTlt~sd~----~----~g~D---~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhg 441 (559)
...+.|+||||+|||||+... . ++.. ..+.+|+.++++.++++|+.+.++|+++. +.++.-|++|+
T Consensus 218 ~~~~iK~lv~DvDnTL~~G~l~~dG~~~~~~~dg~g~g~~ypgv~e~L~~Lk~~Gi~laI~Snn~~---~~v~~~l~~~~ 294 (387)
T 3nvb_A 218 QGKFKKCLILDLDNTIWGGVVGDDGWENIQVGHGLGIGKAFTEFQEWVKKLKNRGIIIAVCSKNNE---GKAKEPFERNP 294 (387)
T ss_dssp TTCCCCEEEECCBTTTBBSCHHHHCGGGSBCSSSSSTHHHHHHHHHHHHHHHHTTCEEEEEEESCH---HHHHHHHHHCT
T ss_pred HhCCCcEEEEcCCCCCCCCeecCCCceeEEeccCccccccCHHHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHhhcc
Confidence 345679999999999999531 1 1111 13578999999999999999999999985 45556666532
Q ss_pred ------CCCceeEecCCCCCChhhHHHHHHHHHhhccCC--cEEEEeCC-ccchhHHHhc--CCCCC
Q psy4654 442 ------FPHGLVSFADGLSPGFLGHKASYLKSLIQDHGV--VIHAAYGS-NKDVSVYTSV--GLKPR 497 (559)
Q Consensus 442 ------lP~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~--~i~aafGN-~~DV~aYr~v--GI~~~ 497 (559)
..+-.+.. +..+ |.+.++.+++..++ .=.+-.|| ..|+.+-++. ||.+-
T Consensus 295 ~~~l~l~~~~~v~~--~~KP-----Kp~~l~~al~~Lgl~pee~v~VGDs~~Di~aaraalpgV~vi 354 (387)
T 3nvb_A 295 EMVLKLDDIAVFVA--NWEN-----KADNIRTIQRTLNIGFDSMVFLDDNPFERNMVREHVPGVTVP 354 (387)
T ss_dssp TCSSCGGGCSEEEE--ESSC-----HHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHHSTTCBCC
T ss_pred ccccCccCccEEEe--CCCC-----cHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHhcCCCeEEE
Confidence 11111221 1233 44444444332232 23466788 6899998877 66544
No 123
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=97.29 E-value=0.00017 Score=70.51 Aligned_cols=57 Identities=16% Similarity=0.281 Sum_probs=42.5
Q ss_pred CeeEEEeeccceeccccccCCCcccchh-HHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCC
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAG-AVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNF 442 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~G-A~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhgl 442 (559)
.|+|+||+||||.+++.. ..+. +.+.+++++++|+.+++.|||+... .+.++.+.++
T Consensus 3 ~kli~~DlDGTLl~~~~~------i~~~~~~~al~~l~~~G~~~~iaTGR~~~~---~~~~~~~l~~ 60 (271)
T 1rlm_A 3 VKVIVTDMDGTFLNDAKT------YNQPRFMAQYQELKKRGIKFVVASGNQYYQ---LISFFPELKD 60 (271)
T ss_dssp CCEEEECCCCCCSCTTSC------CCHHHHHHHHHHHHHHTCEEEEECSSCHHH---HGGGCTTTTT
T ss_pred ccEEEEeCCCCCCCCCCc------CCHHHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHHhcCC
Confidence 489999999999987532 3444 4799999999999999999998543 3344444443
No 124
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=97.25 E-value=0.00027 Score=65.52 Aligned_cols=41 Identities=17% Similarity=0.073 Sum_probs=32.2
Q ss_pred cccchhHHHHHHHHHHC-CCeEEEEecCCchhhHHHHHHHhhCCC
Q psy4654 399 PKVRAGAVDIVRHWQEL-GYLIIYITGRPDMQQGRVLSWLSQHNF 442 (559)
Q Consensus 399 ~~~~~GA~elv~~l~~~-GY~IIYLTaRp~~~~~~T~~WL~qhgl 442 (559)
.++.+|+.++++.++++ |+.+.++|+++... ++.+|++.|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~---~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKY---HHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSC---TTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhh---HHHHHHHhCc
Confidence 35689999999999999 99999999997643 3345555555
No 125
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=97.22 E-value=0.0015 Score=60.37 Aligned_cols=90 Identities=9% Similarity=0.065 Sum_probs=58.4
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCCc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
+.+|+.++++.++++ +.+..+|..+.. |++.++. ++.++..+. ..++|..++ .+++.+ .....
T Consensus 106 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~--------l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~-~~~~~~--~~~~~ 173 (230)
T 3vay_A 106 IFPEVQPTLEILAKT-FTLGVITNGNAD--------VRRLGLADYFAFALCAEDLGIGKPDPAPFL-EALRRA--KVDAS 173 (230)
T ss_dssp BCTTHHHHHHHHHTT-SEEEEEESSCCC--------GGGSTTGGGCSEEEEHHHHTCCTTSHHHHH-HHHHHH--TCCGG
T ss_pred cCcCHHHHHHHHHhC-CeEEEEECCchh--------hhhcCcHHHeeeeEEccccCCCCcCHHHHH-HHHHHh--CCCch
Confidence 678999999999988 999999987754 5666765 444544321 234443332 233333 22222
Q ss_pred EEEEeCC-c-cchhHHHhcCCCCCcEEEEcCC
Q psy4654 476 IHAAYGS-N-KDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 476 i~aafGN-~-~DV~aYr~vGI~~~~If~i~~~ 505 (559)
=...+|| . +|+.+-+++|+.. ..|++.
T Consensus 174 ~~~~vGD~~~~Di~~a~~aG~~~---~~v~~~ 202 (230)
T 3vay_A 174 AAVHVGDHPSDDIAGAQQAGMRA---IWYNPQ 202 (230)
T ss_dssp GEEEEESCTTTTHHHHHHTTCEE---EEECTT
T ss_pred heEEEeCChHHHHHHHHHCCCEE---EEEcCC
Confidence 3567888 6 8999999999964 455544
No 126
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=97.21 E-value=0.0016 Score=63.38 Aligned_cols=88 Identities=9% Similarity=0.020 Sum_probs=58.2
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCC---CCCChhhHHHHHHHHHhhccCCc
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADG---LSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g---~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
+.+|+.++++.+++ |+.+.++|+.+... ++..|++.|+. ++.++..+. ..++|+.+.. +++.+ .....
T Consensus 122 ~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~---~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~-~~~~~--~~~~~ 194 (260)
T 2gfh_A 122 LADDVKAMLTELRK-EVRLLLLTNGDRQT---QREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYH-CCDLL--GVQPG 194 (260)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHH---HHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHH-HHHHH--TCCGG
T ss_pred CCcCHHHHHHHHHc-CCcEEEEECcChHH---HHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHH-HHHHc--CCChh
Confidence 56899999999987 69999999987543 45667777764 455555432 2345544443 33444 22222
Q ss_pred EEEEeCC--ccchhHHHhcCCC
Q psy4654 476 IHAAYGS--NKDVSVYTSVGLK 495 (559)
Q Consensus 476 i~aafGN--~~DV~aYr~vGI~ 495 (559)
=...+|| ..|+.+-+++|+.
T Consensus 195 ~~~~vGDs~~~Di~~A~~aG~~ 216 (260)
T 2gfh_A 195 DCVMVGDTLETDIQGGLNAGLK 216 (260)
T ss_dssp GEEEEESCTTTHHHHHHHTTCS
T ss_pred hEEEECCCchhhHHHHHHCCCc
Confidence 2456788 4899999999994
No 127
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=97.19 E-value=0.00031 Score=68.23 Aligned_cols=55 Identities=13% Similarity=0.282 Sum_probs=41.5
Q ss_pred eeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC
Q psy4654 378 EVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP 443 (559)
Q Consensus 378 k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP 443 (559)
|+|+||+||||. ++.. +. .+.+.+++++++|+.++++|||+.... ..++.+.+++
T Consensus 3 kli~~DlDGTLl-~~~~------~~-~~~~~l~~l~~~g~~~~i~Tgr~~~~~---~~~~~~~~~~ 57 (249)
T 2zos_A 3 RLIFLDIDKTLI-PGYE------PD-PAKPIIEELKDMGFEIIFNSSKTRAEQ---EYYRKELEVE 57 (249)
T ss_dssp EEEEECCSTTTC-TTSC------SG-GGHHHHHHHHHTTEEEEEBCSSCHHHH---HHHHHHHTCC
T ss_pred cEEEEeCCCCcc-CCCC------cH-HHHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHHHcCCC
Confidence 799999999999 5321 22 278999999999999999999986543 3445544554
No 128
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=97.15 E-value=0.00044 Score=72.01 Aligned_cols=68 Identities=16% Similarity=0.179 Sum_probs=55.5
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHh-hCCCC--CceeEec
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLS-QHNFP--HGLVSFA 450 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~-qhglP--~G~L~lr 450 (559)
..++++|||||||.+.. .+.+||.+.++.++++|+.++++|..+....+...+.|. +.|+| .+.++.+
T Consensus 12 ~~~~~l~D~DGvl~~g~-------~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts 82 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFRGK-------KPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQS 82 (352)
T ss_dssp CCEEEEECCBTTTEETT-------EECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECT
T ss_pred cCCEEEEECCCeeEcCC-------eeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeeh
Confidence 47999999999999754 246899999999999999999999998877777788887 46776 3445543
No 129
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=97.09 E-value=0.00041 Score=66.90 Aligned_cols=46 Identities=20% Similarity=0.256 Sum_probs=38.9
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCch
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDM 428 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~ 428 (559)
..|.|+|||||||.+++.. +.+...+.+++++++ +.+++.|||+..
T Consensus 5 ~~kli~~DlDGTLl~~~~~------i~~~~~~al~~l~~~-i~v~iaTGR~~~ 50 (246)
T 2amy_A 5 GPALCLFDVDGTLTAPRQK------ITKEMDDFLQKLRQK-IKIGVVGGSDFE 50 (246)
T ss_dssp CSEEEEEESBTTTBCTTSC------CCHHHHHHHHHHTTT-SEEEEECSSCHH
T ss_pred CceEEEEECCCCcCCCCcc------cCHHHHHHHHHHHhC-CeEEEEcCCCHH
Confidence 5689999999999987532 446689999999999 999999999853
No 130
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=96.98 E-value=0.00037 Score=67.55 Aligned_cols=42 Identities=17% Similarity=0.275 Sum_probs=35.8
Q ss_pred eEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCc
Q psy4654 379 VVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPD 427 (559)
Q Consensus 379 ~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~ 427 (559)
.|+||+||||.+++ . ..+.+.+.+++++++|..++..|||+.
T Consensus 2 li~~DlDGTLl~~~-~------i~~~~~~al~~l~~~Gi~v~iaTGR~~ 43 (259)
T 3zx4_A 2 IVFTDLDGTLLDER-G------ELGPAREALERLRALGVPVVPVTAKTR 43 (259)
T ss_dssp EEEECCCCCCSCSS-S------SCSTTHHHHHHHHHTTCCEEEBCSSCH
T ss_pred EEEEeCCCCCcCCC-c------CCHHHHHHHHHHHHCCCeEEEEeCCCH
Confidence 68999999999886 2 234468899999999999999999984
No 131
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=96.97 E-value=0.0014 Score=61.56 Aligned_cols=74 Identities=16% Similarity=0.154 Sum_probs=56.8
Q ss_pred CCeeEEEeeccceeccccc--cCCC---------------cccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHh
Q psy4654 376 RTEVVVFSVDGSFTASVSV--TGRD---------------PKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLS 438 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~--~g~D---------------~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~ 438 (559)
+.+++|+|+|+||..+... .+.| -..+||+.+.++.+.+. |+|++.|+-+...++...+.|.
T Consensus 14 ~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld 92 (181)
T 2ght_A 14 DKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLD 92 (181)
T ss_dssp TSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHC
T ss_pred CCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHC
Confidence 5689999999999988532 1111 24699999999999997 9999999999999998888887
Q ss_pred hCCCCCceeEecC
Q psy4654 439 QHNFPHGLVSFAD 451 (559)
Q Consensus 439 qhglP~G~L~lr~ 451 (559)
-.++ +..++.++
T Consensus 93 ~~~~-f~~~~~rd 104 (181)
T 2ght_A 93 KWGA-FRARLFRE 104 (181)
T ss_dssp TTCC-EEEEECGG
T ss_pred CCCc-EEEEEecc
Confidence 6552 33344443
No 132
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=96.97 E-value=0.00072 Score=65.43 Aligned_cols=57 Identities=16% Similarity=0.302 Sum_probs=41.5
Q ss_pred eeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhh
Q psy4654 378 EVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQ 439 (559)
Q Consensus 378 k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~q 439 (559)
+.|+||+||||......- .+..+.+...+.+++++++| .++++|||+... .+.++.+
T Consensus 2 kli~~DlDGTLl~~~~~~-~~~~i~~~~~~al~~l~~~g-~v~iaTGR~~~~---~~~~~~~ 58 (239)
T 1u02_A 2 SLIFLDYDGTLVPIIMNP-EESYADAGLLSLISDLKERF-DTYIVTGRSPEE---ISRFLPL 58 (239)
T ss_dssp CEEEEECBTTTBCCCSCG-GGCCCCHHHHHHHHHHHHHS-EEEEECSSCHHH---HHHHSCS
T ss_pred eEEEEecCCCCcCCCCCc-ccCCCCHHHHHHHHHHhcCC-CEEEEeCCCHHH---HHHHhcc
Confidence 689999999999753100 01135567899999999999 999999998643 3445544
No 133
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=96.95 E-value=0.0014 Score=62.57 Aligned_cols=74 Identities=15% Similarity=0.173 Sum_probs=56.8
Q ss_pred CCeeEEEeeccceeccccc--cCCC---------------cccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHh
Q psy4654 376 RTEVVVFSVDGSFTASVSV--TGRD---------------PKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLS 438 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~--~g~D---------------~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~ 438 (559)
+.+++|+|+||||..+... .+.| -..+||+.++++.+++. |+|++.|+-+...++...+.|.
T Consensus 27 ~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld 105 (195)
T 2hhl_A 27 GKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLD 105 (195)
T ss_dssp TCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHC
T ss_pred CCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhC
Confidence 5789999999999998632 1111 24689999999999998 9999999999999988888886
Q ss_pred hCCCCCceeEecC
Q psy4654 439 QHNFPHGLVSFAD 451 (559)
Q Consensus 439 qhglP~G~L~lr~ 451 (559)
-.+. +..++.++
T Consensus 106 ~~~~-f~~~l~rd 117 (195)
T 2hhl_A 106 RWGV-FRARLFRE 117 (195)
T ss_dssp CSSC-EEEEECGG
T ss_pred Cccc-EEEEEEcc
Confidence 5542 34444443
No 134
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=96.94 E-value=0.00067 Score=64.12 Aligned_cols=86 Identities=9% Similarity=-0.015 Sum_probs=53.1
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--CceeEecCCCCCChhhHHHHHHHHHhhccCCcEE
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HGLVSFADGLSPGFLGHKASYLKSLIQDHGVVIH 477 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~~i~ 477 (559)
.+.+|+.++++.++++| .+.++|+.+.. .++.+|++.|+. ++.+.... .++|..++. +++.+ ...=.
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~---~~~~~l~~~gl~~~f~~~~~~~--~~K~~~~~~-~~~~~----~~~~~ 164 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVV---FQPRKIARSGLWDEVEGRVLIY--IHKELMLDQ-VMECY----PARHY 164 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSS---HHHHHHHHTTHHHHTTTCEEEE--SSGGGCHHH-HHHHS----CCSEE
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHH---HHHHHHHHcCcHHhcCeeEEec--CChHHHHHH-HHhcC----CCceE
Confidence 46789999999999999 89999988654 345566666653 11111111 223433332 22222 22335
Q ss_pred EEeCC-cc---chhHHHhcCCCC
Q psy4654 478 AAYGS-NK---DVSVYTSVGLKP 496 (559)
Q Consensus 478 aafGN-~~---DV~aYr~vGI~~ 496 (559)
..+|| .. |+.+-+++|+..
T Consensus 165 ~~vgDs~~d~~di~~A~~aG~~~ 187 (231)
T 2p11_A 165 VMVDDKLRILAAMKKAWGARLTT 187 (231)
T ss_dssp EEECSCHHHHHHHHHHHGGGEEE
T ss_pred EEEcCccchhhhhHHHHHcCCeE
Confidence 77888 45 888888899863
No 135
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=96.92 E-value=0.00063 Score=66.49 Aligned_cols=46 Identities=15% Similarity=0.245 Sum_probs=38.5
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCch
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDM 428 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~ 428 (559)
..|.|+|||||||..++.. +.+...+.+++++++ +.+++.|||+..
T Consensus 12 ~~kli~~DlDGTLl~~~~~------is~~~~~al~~l~~~-i~v~iaTGR~~~ 57 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPARQK------IDPEVAAFLQKLRSR-VQIGVVGGSDYC 57 (262)
T ss_dssp -CEEEEEESBTTTBSTTSC------CCHHHHHHHHHHTTT-SEEEEECSSCHH
T ss_pred CeEEEEEeCccCCCCCCCc------CCHHHHHHHHHHHhC-CEEEEEcCCCHH
Confidence 4699999999999987532 456689999999998 999999999864
No 136
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=96.89 E-value=0.0014 Score=64.35 Aligned_cols=62 Identities=15% Similarity=0.191 Sum_probs=40.6
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHH---HHHH-HHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCC
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAV---DIVR-HWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPH 444 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~---elv~-~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~ 444 (559)
..++|+||+||||+++. -.+....... ++++ ...+.|..++++|||+.... ..++.+.|++.
T Consensus 21 ~~kliifDlDGTLlds~----i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~---~~~~~~~g~~~ 86 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPHT----IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESI---LDKMGRGKFRY 86 (289)
T ss_dssp CSEEEEEETBTTTBCSS----CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHH---HHHHHHTTCCB
T ss_pred CCeEEEEECCCCCcCCC----CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHH---HHHHHhhccCC
Confidence 35899999999999986 1222222222 2222 44678999999999997543 45566667653
No 137
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=96.87 E-value=0.0048 Score=61.05 Aligned_cols=105 Identities=18% Similarity=0.216 Sum_probs=75.6
Q ss_pred CCCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecCCCC
Q psy4654 375 PRTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFADGLS 454 (559)
Q Consensus 375 ~~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~g~~ 454 (559)
.+.++|.+|+|+++...- ...+ ++.+|+.++++.++++|+++..+|+++... ++..|++.|+.. ++.. +.
T Consensus 141 ~g~~~i~~~~d~~~~~~~--~~~~-~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~---~~~~l~~~gl~~---~f~~-i~ 210 (287)
T 3a1c_A 141 EAKTAVIVARNGRVEGII--AVSD-TLKESAKPAVQELKRMGIKVGMITGDNWRS---AEAISRELNLDL---VIAE-VL 210 (287)
T ss_dssp TTCEEEEEEETTEEEEEE--EEEC-CBCTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHHTCSE---EECS-CC
T ss_pred CCCeEEEEEECCEEEEEE--Eecc-ccchhHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHhCCce---eeee-cC
Confidence 456789999999876531 1123 479999999999999999999999988654 445566666632 1221 11
Q ss_pred CChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCC
Q psy4654 455 PGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 455 ~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
+ .-|..+++.+.. . .-...+|| .+|+.+.+++|+.
T Consensus 211 ~---~~K~~~~~~l~~--~-~~~~~vGDs~~Di~~a~~ag~~ 246 (287)
T 3a1c_A 211 P---HQKSEEVKKLQA--K-EVVAFVGDGINDAPALAQADLG 246 (287)
T ss_dssp T---TCHHHHHHHHTT--T-CCEEEEECTTTCHHHHHHSSEE
T ss_pred h---HHHHHHHHHHhc--C-CeEEEEECCHHHHHHHHHCCee
Confidence 2 247888888832 3 45678899 7999999999994
No 138
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=96.80 E-value=0.00091 Score=67.63 Aligned_cols=90 Identities=18% Similarity=0.170 Sum_probs=60.1
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCc--e-eEec----------CCCCCChhhHHHHHHH
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHG--L-VSFA----------DGLSPGFLGHKASYLK 466 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G--~-L~lr----------~g~~~dp~~~K~~~L~ 466 (559)
++.+|+.++++.++++|+++..+|+-+. ..++..+++.|+..- . +... +.... .-|.+.++
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~---~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~---kpk~~~~~ 251 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFT---YFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSA---QTKADILL 251 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCH---HHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcH---HHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccCh---hhhHHHHH
Confidence 4789999999999999999999998653 445556666666421 0 1111 11111 23666666
Q ss_pred HHhhccCC--cEEEEeCC-ccchhHHHhcCCC
Q psy4654 467 SLIQDHGV--VIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 467 ~L~~~~~~--~i~aafGN-~~DV~aYr~vGI~ 495 (559)
.+.+..++ .-...+|| .+|+.+.+++|+.
T Consensus 252 ~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~ 283 (335)
T 3n28_A 252 TLAQQYDVEIHNTVAVGDGANDLVMMAAAGLG 283 (335)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE
T ss_pred HHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 65443333 34678999 7999999999984
No 139
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=96.73 E-value=0.0013 Score=61.21 Aligned_cols=30 Identities=23% Similarity=0.221 Sum_probs=25.4
Q ss_pred ccchhHHHHHHHHHHC-CCeEEEEecCCchh
Q psy4654 400 KVRAGAVDIVRHWQEL-GYLIIYITGRPDMQ 429 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~-GY~IIYLTaRp~~~ 429 (559)
++.+||.++++.++++ |+.+.++|+++...
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~ 105 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMF 105 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCC
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccch
Confidence 4678999999999999 99999999987643
No 140
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=96.62 E-value=0.0013 Score=63.64 Aligned_cols=64 Identities=13% Similarity=0.134 Sum_probs=43.2
Q ss_pred eeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC-CceeEecCC
Q psy4654 378 EVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP-HGLVSFADG 452 (559)
Q Consensus 378 k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP-~G~L~lr~g 452 (559)
..|+||+||||.+++.. .+...+.+++++ +|+.+++.|||+... .+.++.+.+++ .+.++...|
T Consensus 4 ~li~~DlDGTLl~~~~~-------~~~~~~~l~~~~-~gi~v~iaTGR~~~~---~~~~~~~l~l~~~~~~I~~NG 68 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQQA-------LEHLQEYLGDRR-GNFYLAYATGRSYHS---ARELQKQVGLMEPDYWLTAVG 68 (244)
T ss_dssp EEEEECTBTTTBSCHHH-------HHHHHHHHHTTG-GGEEEEEECSSCHHH---HHHHHHHHTCCCCSEEEETTT
T ss_pred eEEEEeCCCCCcCCHHH-------HHHHHHHHHHhc-CCCEEEEEcCCCHHH---HHHHHHHcCCCCCCEEEECCC
Confidence 38999999999987521 244667777754 689999999998653 34556665554 244554433
No 141
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=96.34 E-value=0.0026 Score=58.51 Aligned_cols=92 Identities=7% Similarity=-0.096 Sum_probs=52.4
Q ss_pred chhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--C-ceeEecCC---C--CCChhhHHHHHHHHHhhccC
Q psy4654 402 RAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--H-GLVSFADG---L--SPGFLGHKASYLKSLIQDHG 473 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~-G~L~lr~g---~--~~dp~~~K~~~L~~L~~~~~ 473 (559)
.+|+.++++.++ ..+.++|+.+.. ....+|++.++. . +.++..+. . .++|..++ .+++.+ ...
T Consensus 89 ~~~~~~~l~~l~---~~~~i~s~~~~~---~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~-~~~~~l--~~~ 159 (229)
T 2fdr_A 89 IDGVKFALSRLT---TPRCICSNSSSH---RLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFL-HGAAQF--GVS 159 (229)
T ss_dssp CTTHHHHHHHCC---SCEEEEESSCHH---HHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHH-HHHHHH--TCC
T ss_pred CcCHHHHHHHhC---CCEEEEECCChh---HHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHH-HHHHHc--CCC
Confidence 455666665553 378888887543 445667777765 2 44444321 1 33443332 223333 222
Q ss_pred CcEEEEeCC-ccchhHHHhcCCCCCcEEEEcCC
Q psy4654 474 VVIHAAYGS-NKDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 474 ~~i~aafGN-~~DV~aYr~vGI~~~~If~i~~~ 505 (559)
..=...+|| .+|+.+.+++|+. ++.++..
T Consensus 160 ~~~~i~iGD~~~Di~~a~~aG~~---~i~~~~~ 189 (229)
T 2fdr_A 160 PDRVVVVEDSVHGIHGARAAGMR---VIGFTGA 189 (229)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCE---EEEECCS
T ss_pred hhHeEEEcCCHHHHHHHHHCCCE---EEEEecC
Confidence 233567899 6999999999986 3455543
No 142
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=96.14 E-value=0.0066 Score=58.84 Aligned_cols=64 Identities=17% Similarity=0.150 Sum_probs=53.1
Q ss_pred CCeeEEEeeccceeccccc--cCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhC
Q psy4654 376 RTEVVVFSVDGSFTASVSV--TGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQH 440 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~--~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qh 440 (559)
+.+++|.|+|+||..+... .|.--..+||+.+.++.+. ++|+|++.|+-....++...++|.-.
T Consensus 33 ~~~tLVLDLDeTLvh~~~~~~~~~~v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp~ 98 (204)
T 3qle_A 33 RPLTLVITLEDFLVHSEWSQKHGWRTAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDPI 98 (204)
T ss_dssp CSEEEEEECBTTTEEEEEETTTEEEEEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTSTT
T ss_pred CCeEEEEeccccEEeeeccccCceeEEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCC
Confidence 5679999999999998643 2222257999999999997 68999999999999999999998754
No 143
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=96.08 E-value=0.046 Score=56.31 Aligned_cols=103 Identities=15% Similarity=0.041 Sum_probs=67.0
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhh----CCCCCceeEec-----C---------------CCC-
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQ----HNFPHGLVSFA-----D---------------GLS- 454 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~q----hglP~G~L~lr-----~---------------g~~- 454 (559)
.+.+++.+|++.++++|+.+++|||-++ +.++-|-.. +|||...|+=. . |.-
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~---~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~ 219 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHE---ELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYD 219 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCC
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcH---HHHHHHHhhcccccCCCHHHeEeeeeeeecccccccccccccccccccc
Confidence 4678899999999999999999999654 455666665 79998887721 0 100
Q ss_pred -------------CCh---hhHHHHHHHHHhhccCCcEEEEeCCc--cchhHHHhcCCCCCcEEEEcCCC
Q psy4654 455 -------------PGF---LGHKASYLKSLIQDHGVVIHAAYGSN--KDVSVYTSVGLKPRSIYIVGKVS 506 (559)
Q Consensus 455 -------------~dp---~~~K~~~L~~L~~~~~~~i~aafGN~--~DV~aYr~vGI~~~~If~i~~~~ 506 (559)
..| -.-|...++..+....-|| .++||+ .|..+.+..-=...--++||+..
T Consensus 220 ~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi-~a~Gns~dgD~~ML~~~~~~~~~~L~in~~~ 288 (327)
T 4as2_A 220 PKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPI-LVAGDTPDSDGYMLFNGTAENGVHLWVNRKA 288 (327)
T ss_dssp GGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCS-EEEESCHHHHHHHHHHTSCTTCEEEEECCCH
T ss_pred ccccccccccccccccccccCccHHHHHHHHhhCCCCe-EEecCCCCCCHHHHhccccCCCeEEEEecCC
Confidence 001 1248888887653323344 456664 69998854322233457888874
No 144
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=95.76 E-value=0.04 Score=54.12 Aligned_cols=92 Identities=9% Similarity=0.020 Sum_probs=53.0
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhC--C---------CC--CceeEecC--CCCCChhhHHHHHH
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQH--N---------FP--HGLVSFAD--GLSPGFLGHKASYL 465 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qh--g---------lP--~G~L~lr~--g~~~dp~~~K~~~L 465 (559)
+.+|+.++++. |+++..+|.-+.. .++..|++. | +. .+.++-.. +..++|+.|.. ++
T Consensus 126 ~~pgv~e~L~~----g~~l~i~Tn~~~~---~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~-a~ 197 (253)
T 2g80_A 126 VYADAIDFIKR----KKRVFIYSSGSVK---AQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYAN-IL 197 (253)
T ss_dssp CCHHHHHHHHH----CSCEEEECSSCHH---HHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHH-HH
T ss_pred CCCCHHHHHHc----CCEEEEEeCCCHH---HHHHHHHhhcccccccccccchHhhcceEEeeeccCCCCCHHHHHH-HH
Confidence 34677777766 8999999987643 445566654 3 10 12222111 23667766655 34
Q ss_pred HHHhhccCCcEEEEeCC-ccchhHHHhcCCCCCcEEEEcCC
Q psy4654 466 KSLIQDHGVVIHAAYGS-NKDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 466 ~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~~~~If~i~~~ 505 (559)
+.+ .+.-.=...+|| ..|+.+-+++|+.. ..|+..
T Consensus 198 ~~l--g~~p~~~l~vgDs~~di~aA~~aG~~~---i~v~~~ 233 (253)
T 2g80_A 198 RDI--GAKASEVLFLSDNPLELDAAAGVGIAT---GLASRP 233 (253)
T ss_dssp HHH--TCCGGGEEEEESCHHHHHHHHTTTCEE---EEECCT
T ss_pred HHc--CCCcccEEEEcCCHHHHHHHHHcCCEE---EEEcCC
Confidence 444 111112356777 68999999999853 445443
No 145
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=95.12 E-value=0.042 Score=56.64 Aligned_cols=66 Identities=12% Similarity=0.071 Sum_probs=53.9
Q ss_pred CCeeEEEeeccceeccccccCC-CcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCC
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGR-DPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNF 442 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~-D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhgl 442 (559)
+.+++|+|+||||..+....+. --..|||+.+.++.+.+ .|+|++.|+-....++...++|.-.+-
T Consensus 139 ~k~tLVLDLDeTLvh~~~~~~~~~~~~RP~l~eFL~~l~~-~yeivIfTas~~~ya~~vld~Ld~~~~ 205 (320)
T 3shq_A 139 GKKLLVLDIDYTLFDHRSPAETGTELMRPYLHEFLTSAYE-DYDIVIWSATSMRWIEEKMRLLGVASN 205 (320)
T ss_dssp TCEEEEECCBTTTBCSSSCCSSHHHHBCTTHHHHHHHHHH-HEEEEEECSSCHHHHHHHHHHTTCTTC
T ss_pred CCcEEEEeccccEEcccccCCCcceEeCCCHHHHHHHHHh-CCEEEEEcCCcHHHHHHHHHHhCCCCC
Confidence 5699999999999998752111 11369999999999985 699999999999999999999976543
No 146
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=94.35 E-value=0.0035 Score=63.39 Aligned_cols=39 Identities=5% Similarity=-0.183 Sum_probs=28.1
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCc
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPD 427 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~ 427 (559)
.|+|+||+||||.+++.. +.+.++..+|..++.+|||+.
T Consensus 21 ~kli~fDlDGTLld~~~~------------~~l~~~~~~g~~~~~~tGR~~ 59 (332)
T 1y8a_A 21 GHMFFTDWEGPWILTDFA------------LELCMAVFNNARFFSNLSEYD 59 (332)
T ss_dssp CCEEEECSBTTTBCCCHH------------HHHHHHHHCCHHHHHHHHHHH
T ss_pred ceEEEEECcCCCcCccHH------------HHHHHHHHCCCEEEEEcCCCc
Confidence 589999999999988642 344555566666666777754
No 147
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=94.14 E-value=0.094 Score=58.62 Aligned_cols=104 Identities=18% Similarity=0.204 Sum_probs=74.5
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecCCCCC
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFADGLSP 455 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~g~~~ 455 (559)
+...+.+..||++..-- .-.|+ +++++.+.++.++++|++++.+|||+....+.. .++-|+. .++.+ ..
T Consensus 436 g~~~l~va~~~~~~G~i--~~~D~-l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~i---a~~lgi~--~~~~~--~~- 504 (645)
T 3j08_A 436 AKTAVIVARNGRVEGII--AVSDT-LKESAKPAVQELKRMGIKVGMITGDNWRSAEAI---SRELNLD--LVIAE--VL- 504 (645)
T ss_dssp TCCCEEEEETTEEEEEE--EEECC-CTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHH---HHHHTCS--EEECS--CC-
T ss_pred CCeEEEEEECCEEEEEE--EecCC-chhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH---HHHcCCC--EEEEe--CC-
Confidence 44566677777765322 23464 899999999999999999999999997655443 3344553 22222 12
Q ss_pred ChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCC
Q psy4654 456 GFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 456 dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
| ..|.+.++.+... ...+.+|| .+|+.+.+.+|+.
T Consensus 505 -P-~~K~~~v~~l~~~---~~v~~vGDg~ND~~al~~A~vg 540 (645)
T 3j08_A 505 -P-HQKSEEVKKLQAK---EVVAFVGDGINDAPALAQADLG 540 (645)
T ss_dssp -T-TCHHHHHHHHTTT---CCEEEEECSSSCHHHHHHSSEE
T ss_pred -H-HhHHHHHHHHhhC---CeEEEEeCCHhHHHHHHhCCEE
Confidence 2 3699999999543 67899999 8999999998853
No 148
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=93.91 E-value=0.1 Score=59.36 Aligned_cols=105 Identities=19% Similarity=0.239 Sum_probs=75.4
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecCCCCC
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFADGLSP 455 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~g~~~ 455 (559)
+..++.+.+||++.-- +.-.|+ +++++.+.++.++++|++++.+|||+....+... ++-|+.. ++.+ -
T Consensus 533 G~~vl~va~d~~~~G~--i~i~D~-i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia---~~lgi~~--v~a~----~ 600 (736)
T 3rfu_A 533 GASVMFMAVDGKTVAL--LVVEDP-IKSSTPETILELQQSGIEIVMLTGDSKRTAEAVA---GTLGIKK--VVAE----I 600 (736)
T ss_dssp TCEEEEEEETTEEEEE--EEEECC-BCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHH---HHHTCCC--EECS----C
T ss_pred CCeEEEEEECCEEEEE--EEeecc-chhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH---HHcCCCE--EEEe----c
Confidence 4466777888877532 223564 8999999999999999999999999976554443 3345542 2221 2
Q ss_pred ChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCC
Q psy4654 456 GFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 456 dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
.| ..|.+.++.|.. .....+..|| .+|+.+.+.+|+.
T Consensus 601 ~P-~~K~~~v~~l~~--~g~~V~~vGDG~ND~paL~~AdvG 638 (736)
T 3rfu_A 601 MP-EDKSRIVSELKD--KGLIVAMAGDGVNDAPALAKADIG 638 (736)
T ss_dssp CH-HHHHHHHHHHHH--HSCCEEEEECSSTTHHHHHHSSEE
T ss_pred CH-HHHHHHHHHHHh--cCCEEEEEECChHhHHHHHhCCEE
Confidence 34 569999999964 2345888999 8999999988753
No 149
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=93.84 E-value=0.13 Score=58.30 Aligned_cols=104 Identities=19% Similarity=0.212 Sum_probs=74.7
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecCCCCC
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFADGLSP 455 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~g~~~ 455 (559)
+..++.+..||++.-- +.-.|+ +++++.+.++.++++|++++.+|||+...++.. .++-|+. .++ .+. .
T Consensus 514 g~~~~~va~~~~~~G~--i~i~D~-~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~i---a~~lgi~--~~~-~~~-~- 582 (723)
T 3j09_A 514 AKTAVIVARNGRVEGI--IAVSDT-LKESAKPAVQELKRMGIKVGMITGDNWRSAEAI---SRELNLD--LVI-AEV-L- 582 (723)
T ss_dssp TCEEEEEEETTEEEEE--EEEECC-SCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHH---HHHHTCS--EEE-CSC-C-
T ss_pred CCeEEEEEECCEEEEE--EeecCC-cchhHHHHHHHHHHCCCEEEEECCCCHHHHHHH---HHHcCCc--EEE-ccC-C-
Confidence 4456777778876533 223464 899999999999999999999999997555443 3334553 222 221 2
Q ss_pred ChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCC
Q psy4654 456 GFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 456 dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
| ..|.+.++.+... ...+.+|| .+|+.+.+.+|+.
T Consensus 583 -P-~~K~~~v~~l~~~---~~v~~vGDg~ND~~al~~A~vg 618 (723)
T 3j09_A 583 -P-HQKSEEVKKLQAK---EVVAFVGDGINDAPALAQADLG 618 (723)
T ss_dssp -T-TCHHHHHHHHTTT---CCEEEEECSSTTHHHHHHSSEE
T ss_pred -H-HHHHHHHHHHhcC---CeEEEEECChhhHHHHhhCCEE
Confidence 2 3699999999543 67899999 8999999998743
No 150
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=93.84 E-value=0.07 Score=47.43 Aligned_cols=48 Identities=19% Similarity=0.437 Sum_probs=36.0
Q ss_pred EeEEEEecCCCCcEEEEEEEEeCCCccEEEecCCCCcCCCCccceEEEE
Q psy4654 311 VDVHLIKEPPSGEWVLMSTEVTDKTGRVSYTLPEDHKLSYGMYPVKMVV 359 (559)
Q Consensus 311 vdi~~~~~~~~g~w~~~~t~~t~s~gri~~~~p~~~~L~~G~y~vkmvV 359 (559)
|.|-++.....++|+.+.+-+||.|||+.--+ ....+..|.|.+.|-+
T Consensus 19 v~V~L~~~~~~~~~~~l~~~~Tn~DGR~~~l~-~~~~~~~G~Y~l~F~t 66 (115)
T 1f86_A 19 VAVHVFRKAADDTWEPFASGKTSESGELHGLT-TEEEFVEGIYKVEIDT 66 (115)
T ss_dssp CEEEEEEECTTSCEEEEEEEECCTTSEECCSC-CTTTCCSEEEEEEECH
T ss_pred CEEEEEEcCCCCCcEEEEEeecCCCccccCcC-CCCCCcceEEEEEEEh
Confidence 44444443234679999999999999997433 3456899999999976
No 151
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=93.68 E-value=0.073 Score=49.25 Aligned_cols=49 Identities=18% Similarity=0.447 Sum_probs=38.3
Q ss_pred EeEEEEecCCCCcEEEEEEEEeCCCccEEEecCCCCcCCCCccceEEEEc
Q psy4654 311 VDVHLIKEPPSGEWVLMSTEVTDKTGRVSYTLPEDHKLSYGMYPVKMVVR 360 (559)
Q Consensus 311 vdi~~~~~~~~g~w~~~~t~~t~s~gri~~~~p~~~~L~~G~y~vkmvV~ 360 (559)
|.|-++.....|+|+.+.+-+||.||||.--++ ...+..|.|.+.|-+.
T Consensus 48 v~V~L~~~~~~~~~~~l~~~~Td~DGR~~~ll~-~~~~~~G~Y~L~F~tg 96 (147)
T 4ank_A 48 VAVHVFRKAADDTWEPFASGKTSESGELHGLTT-EEEFVEGIYKVEIDTK 96 (147)
T ss_dssp CEEEEEEECTTSCEEEEEEEECCTTSEECCSCC-TTTCCSEEEEEEECHH
T ss_pred CEEEEEEECCCCCeEEEEEEEeCCCCCCCCCCC-ccccCCceEEEEEEHH
Confidence 555555554578999999999999999975444 4458899999998873
No 152
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=93.58 E-value=0.21 Score=52.37 Aligned_cols=102 Identities=14% Similarity=0.106 Sum_probs=69.2
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhh----CCCCCceeEe-----c-CC-----C-CCCh---hhH
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQ----HNFPHGLVSF-----A-DG-----L-SPGF---LGH 460 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~q----hglP~G~L~l-----r-~g-----~-~~dp---~~~ 460 (559)
.+.+|+.+|++.++++|+.+++|||= ..+.++.|.++ +++|.+.|+= . +| . ...| -.-
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg---~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~g 297 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSAS---FIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREG 297 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHH
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCC---cHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCc
Confidence 47899999999999999999999984 45666777776 4567666552 1 11 0 0111 135
Q ss_pred HHHHHHHHhhc-cCCcEEEEeCC-ccchhHHHhcCCCCCcEEEEcCC
Q psy4654 461 KASYLKSLIQD-HGVVIHAAYGS-NKDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 461 K~~~L~~L~~~-~~~~i~aafGN-~~DV~aYr~vGI~~~~If~i~~~ 505 (559)
|...+++++.. .+.....+||| ..|+.|.++++=+. -..+||+.
T Consensus 298 K~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~-~~liinr~ 343 (385)
T 4gxt_A 298 KVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTD-LSLIIHRA 343 (385)
T ss_dssp HHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCS-EEEEECCS
T ss_pred hHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCc-eEEEEcCC
Confidence 99999887532 23345678899 79999999764332 33467764
No 153
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=93.55 E-value=0.19 Score=49.61 Aligned_cols=44 Identities=11% Similarity=0.107 Sum_probs=38.2
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCce
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGL 446 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~ 446 (559)
++++|+.++++.++++|..++.+|| +....++.-+++.|+.+..
T Consensus 141 ~l~~g~~e~i~~l~~~gi~v~ivSg---g~~~~i~~i~~~~g~~~~~ 184 (297)
T 4fe3_A 141 MLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVYHSN 184 (297)
T ss_dssp CBCBTHHHHHHHHHHTTCCEEEEEE---EEHHHHHHHHHHTTCCCTT
T ss_pred CCCCcHHHHHHHHHHcCCeEEEEeC---CcHHHHHHHHHHcCCCccc
Confidence 4799999999999999999999998 6677888888888887653
No 154
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=93.32 E-value=0.098 Score=54.98 Aligned_cols=77 Identities=16% Similarity=0.152 Sum_probs=57.9
Q ss_pred CCCCeeEEEeeccceeccccc--cC--------------CC------------------cccchhHHHHHHHHHHCCCeE
Q psy4654 374 PPRTEVVVFSVDGSFTASVSV--TG--------------RD------------------PKVRAGAVDIVRHWQELGYLI 419 (559)
Q Consensus 374 ~~~~k~VIfDIDGTlt~sd~~--~g--------------~D------------------~~~~~GA~elv~~l~~~GY~I 419 (559)
..+.+++|+|+||||.+|... ++ +| -+.+||+.+.++.+. ++|+|
T Consensus 15 ~~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~-~~yei 93 (372)
T 3ef0_A 15 QEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS-ELYEL 93 (372)
T ss_dssp HHTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHH-TTEEE
T ss_pred hCCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHh-cCcEE
Confidence 346789999999999998421 10 00 124899999999997 78999
Q ss_pred EEEecCCchhhHHHHHHHhhCC-CCCceeEecC
Q psy4654 420 IYITGRPDMQQGRVLSWLSQHN-FPHGLVSFAD 451 (559)
Q Consensus 420 IYLTaRp~~~~~~T~~WL~qhg-lP~G~L~lr~ 451 (559)
++.|+-....++...++|.-.+ +-.+.++.|+
T Consensus 94 vI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~ 126 (372)
T 3ef0_A 94 HIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRD 126 (372)
T ss_dssp EEECSSCHHHHHHHHHHHCTTSCSSSSCEECTT
T ss_pred EEEeCCcHHHHHHHHHHhccCCceeeeEEEEec
Confidence 9999999999999999998766 3223454453
No 155
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=93.25 E-value=0.098 Score=47.28 Aligned_cols=48 Identities=19% Similarity=0.437 Sum_probs=36.1
Q ss_pred EeEEEEecCCCCcEEEEEEEEeCCCccEEEecCCCCcCCCCccceEEEE
Q psy4654 311 VDVHLIKEPPSGEWVLMSTEVTDKTGRVSYTLPEDHKLSYGMYPVKMVV 359 (559)
Q Consensus 311 vdi~~~~~~~~g~w~~~~t~~t~s~gri~~~~p~~~~L~~G~y~vkmvV 359 (559)
|.|-++.....++|+.+.+-+||.|||+.--+ ....+..|.|.+.|-+
T Consensus 28 v~V~L~~~~~~~~w~~l~~~~Tn~DGR~~~ll-~~~~~~~G~Y~L~F~t 75 (127)
T 2h4e_A 28 VAVHVFRKAADDTWEPFASGKTSESGELHGLT-TEEEFVEGIYKVEIDT 75 (127)
T ss_dssp CEEEEEEECTTSCEEEEEEEECCTTSEECCSC-CTTTCCSEEEEEEECH
T ss_pred CEEEEEEeCCCCCeEEEEEeecCCCccccCcC-CCCCccceEEEEEEEh
Confidence 45555543234679999999999999997433 3456899999999876
No 156
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=92.87 E-value=0.073 Score=47.59 Aligned_cols=48 Identities=25% Similarity=0.552 Sum_probs=35.7
Q ss_pred EeEEEEecCCCCcEEEEEEEEeCCCccEEEecCCCCcCCCCccceEEEE
Q psy4654 311 VDVHLIKEPPSGEWVLMSTEVTDKTGRVSYTLPEDHKLSYGMYPVKMVV 359 (559)
Q Consensus 311 vdi~~~~~~~~g~w~~~~t~~t~s~gri~~~~p~~~~L~~G~y~vkmvV 359 (559)
|.|-++.....++|+.+.+-+||.|||+.--+ .+..+..|.|.+.|-+
T Consensus 20 v~V~L~~~~~~~~~~~l~~~~Tn~DGR~~~l~-~~~~~~~G~Y~l~F~t 67 (119)
T 1oo2_A 20 VALKVSQKTADGGWTQIATGVTDATGEIHNLI-TEQQFPAGVYRVEFDT 67 (119)
T ss_dssp CEEEEEEECTTSCEEEEEEEECCTTSCCTTCS-CGGGCCSEEEEEEECH
T ss_pred CEEEEEEeCCCCCcEEEEEEecCCCCcccCcC-CCCCCCceEEEEEEEh
Confidence 44444443334679999999999999996333 3556899999999976
No 157
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=90.89 E-value=0.8 Score=53.86 Aligned_cols=97 Identities=19% Similarity=0.155 Sum_probs=63.1
Q ss_pred CCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHH--------------HHhhCCCCCcee--------EecC--
Q psy4654 396 GRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLS--------------WLSQHNFPHGLV--------SFAD-- 451 (559)
Q Consensus 396 g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~--------------WL~qhglP~G~L--------~lr~-- 451 (559)
-.|| +++++.+.++.++++|++++.+|||+...+...-+ +.++.+++.... .+.+
T Consensus 601 i~Dp-~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 679 (1034)
T 3ixz_A 601 MIDP-PRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQ 679 (1034)
T ss_pred ccCC-CchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHh
Confidence 3565 89999999999999999999999998654433211 111122211100 0000
Q ss_pred -------------------C-CCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 452 -------------------G-LSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 452 -------------------g-~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
. .+-.| ..|...++.+.. ...+.+++|| .+|+.|.+.+|+-.
T Consensus 680 l~~~~~~~l~~~~~~~~~~v~ar~~P-~~K~~iv~~lq~--~g~~V~a~GDG~ND~~mLk~A~vGI 742 (1034)
T 3ixz_A 680 LKDMDPSELVEALRTHPEMVFARTSP-QQKLVIVESCQR--LGAIVAVTGDGVNDSPALKKADIGV 742 (1034)
T ss_pred hhhCCHHHHHHHHHhCCceEEEecCH-HHHHHHHHHHHH--cCCEEEEECCcHHhHHHHHHCCeeE
Confidence 0 01234 468888888853 3457999999 89999999987653
No 158
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=90.65 E-value=0.67 Score=54.50 Aligned_cols=90 Identities=19% Similarity=0.215 Sum_probs=64.7
Q ss_pred CCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCc--------------------------e----
Q psy4654 397 RDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHG--------------------------L---- 446 (559)
Q Consensus 397 ~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G--------------------------~---- 446 (559)
.|| ++++|.+.++.++++|.+++.+|||....+...-.-+ |+... .
T Consensus 597 ~Dp-lr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~l---gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G 672 (1028)
T 2zxe_A 597 IDP-PRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV---GIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHG 672 (1028)
T ss_dssp ECC-BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEH
T ss_pred CCC-CChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHc---CCCCCCchhHHHHHhhcCcchhhccccccceEEEEc
Confidence 475 8999999999999999999999999876654443322 33210 0
Q ss_pred --------------------eEecCCCCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 447 --------------------VSFADGLSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 447 --------------------L~lr~g~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
+.+. +-.| ..|...++.+.+. -.+++.+|| .+|+.|.+.+++-.
T Consensus 673 ~~l~~~~~~~l~~~~~~~~~~v~a---r~~P-~~K~~iV~~lq~~--g~~V~~iGDG~ND~paLk~AdvGI 737 (1028)
T 2zxe_A 673 SDLKDLSTEVLDDILHYHTEIVFA---RTSP-QQKLIIVEGCQRQ--GAIVAVTGDGVNDSPALKKADIGV 737 (1028)
T ss_dssp HHHTTCCHHHHHHHHHHCSEEEEE---SCCH-HHHHHHHHHHHHT--TCCEEEEECSGGGHHHHHHSSEEE
T ss_pred HHhhhCCHHHHHHHHhhCCcEEEE---EcCH-HHHHHHHHHHHhC--CCEEEEEcCCcchHHHHHhCCceE
Confidence 1111 2234 5799999998642 357899999 89999999987653
No 159
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=89.88 E-value=0.3 Score=43.35 Aligned_cols=48 Identities=29% Similarity=0.454 Sum_probs=35.0
Q ss_pred EeEEEEecCCCCcEEEEEEEEeCCCccEEEecCCCCcCCCCccceEEEEc
Q psy4654 311 VDVHLIKEPPSGEWVLMSTEVTDKTGRVSYTLPEDHKLSYGMYPVKMVVR 360 (559)
Q Consensus 311 vdi~~~~~~~~g~w~~~~t~~t~s~gri~~~~p~~~~L~~G~y~vkmvV~ 360 (559)
|.|-++... .++|+.+.+-+||.|||+.--+ .+..+..|.|.+.|-+.
T Consensus 22 v~V~L~~~~-~~~~~~l~~~~Tn~DGR~~~l~-~~~~~~~G~Y~l~F~tg 69 (114)
T 2g2n_A 22 VTVTLEKKA-DNGWLQLNTAKTDKDGRIKALW-PEQTATTGDYRVVFKTG 69 (114)
T ss_dssp CEEEEEEEC-SSSEEEEEEEECCTTSEESCCS-CSSCCCSEEEEEEECHH
T ss_pred CEEEEEEeC-CCCcEEEEEEecCCCCcccccc-CCCCCCceEEEEEEEhh
Confidence 444444432 2459999999999999985443 35568999999999763
No 160
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=88.24 E-value=1.4 Score=51.60 Aligned_cols=89 Identities=17% Similarity=0.128 Sum_probs=65.1
Q ss_pred CCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCc------e-----------------------
Q psy4654 396 GRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHG------L----------------------- 446 (559)
Q Consensus 396 g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G------~----------------------- 446 (559)
-.|+ +++++.+.++.+++.|.+++.+||+....+...-+ +-|+... .
T Consensus 600 i~D~-lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~---~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~ 675 (995)
T 3ar4_A 600 MLDP-PRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICR---RIGIFGENEEVADRAYTGREFDDLPLAEQREACRRAC 675 (995)
T ss_dssp EECC-BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH---HHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCC
T ss_pred ecCC-CchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHH---HcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCc
Confidence 3465 89999999999999999999999998766644433 2355321 1
Q ss_pred eEecCCCCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCC
Q psy4654 447 VSFADGLSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 447 L~lr~g~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
++.+ -.| ..|...++.|... + ...+..|| .+|+.|.+++++.
T Consensus 676 v~~r----~~P-~~K~~~v~~l~~~-g-~~v~~~GDG~ND~~alk~Advg 718 (995)
T 3ar4_A 676 CFAR----VEP-SHKSKIVEYLQSY-D-EITAMTGDGVNDAPALKKAEIG 718 (995)
T ss_dssp EEES----CCS-SHHHHHHHHHHTT-T-CCEEEEECSGGGHHHHHHSTEE
T ss_pred EEEE----eCH-HHHHHHHHHHHHC-C-CEEEEEcCCchhHHHHHHCCeE
Confidence 1111 123 4799999999643 3 57889999 8999999998774
No 161
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=86.74 E-value=0.41 Score=43.82 Aligned_cols=49 Identities=20% Similarity=0.472 Sum_probs=36.9
Q ss_pred EeEEEEec-CCCCcEEEEEEEEeCCCccEEEecCCCCcCCCCccceEEEEc
Q psy4654 311 VDVHLIKE-PPSGEWVLMSTEVTDKTGRVSYTLPEDHKLSYGMYPVKMVVR 360 (559)
Q Consensus 311 vdi~~~~~-~~~g~w~~~~t~~t~s~gri~~~~p~~~~L~~G~y~vkmvV~ 360 (559)
|.|-++.. +..++|+.+.+-+||.|||+.--++ ...+..|.|.+.|-+.
T Consensus 44 v~V~L~~~~~~~~~w~~l~~~~Tn~DGR~~~ll~-~~~~~~G~Y~L~F~tg 93 (138)
T 3iwv_A 44 MTIVLHRLDPVSSAWNILTTGITNDDGRCPGLIT-KENFIAGVYKMRFETG 93 (138)
T ss_dssp CEEEEEEECSSSCCEEEEEEEECCTTSCCTTSSC-TTTCCSEEEEEEECHH
T ss_pred CEEEEEEECCCCCCcEEEEEEecCCCCCcCCccC-cccCCCceEEEEEehH
Confidence 55555553 2347899999999999999964344 4468999999999773
No 162
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=85.59 E-value=0.91 Score=47.67 Aligned_cols=93 Identities=13% Similarity=0.061 Sum_probs=60.9
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCC--Cc--eeEecCC--------------CCCChhhHH
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFP--HG--LVSFADG--------------LSPGFLGHK 461 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP--~G--~L~lr~g--------------~~~dp~~~K 461 (559)
++.+|+.++++.|+++|+.+.++|+.+.... +.-|++.|+. ++ .++..+. ..++|..|.
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~---~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~ 291 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTET---VVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI 291 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHH---HHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHH---HHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHH
Confidence 4789999999999999999999999976443 4445555663 23 4554321 246676664
Q ss_pred HHHHHHHh---------hc---cCCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 462 ASYLKSLI---------QD---HGVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 462 ~~~L~~L~---------~~---~~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
. +++.+- .. ....=...+|| ..|+.+-+++|+..
T Consensus 292 ~-a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~ 338 (384)
T 1qyi_A 292 A-ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATF 338 (384)
T ss_dssp H-HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEE
T ss_pred H-HHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEE
Confidence 3 333320 00 11222466788 69999999999973
No 163
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=84.60 E-value=0.2 Score=48.97 Aligned_cols=84 Identities=17% Similarity=0.186 Sum_probs=58.7
Q ss_pred ccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhccCCcEEEE
Q psy4654 400 KVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQDHGVVIHAA 479 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~~i~aa 479 (559)
++++|+.++++.|+++|+++..+|+.+.... +..+++.|+.. ++.. .. | ..|..+++.+.. ...-...
T Consensus 136 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~---~~~~~~~gl~~---~f~~-~~--p-~~k~~~~~~l~~--~~~~~~~ 203 (263)
T 2yj3_A 136 VPRPNLKDYLEKLKNEGLKIIILSGDKEDKV---KELSKELNIQE---YYSN-LS--P-EDKVRIIEKLKQ--NGNKVLM 203 (263)
Confidence 4899999999999999999999999866543 34455556532 1111 11 2 347778887732 2234567
Q ss_pred eCC-ccchhHHHhcCCC
Q psy4654 480 YGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 480 fGN-~~DV~aYr~vGI~ 495 (559)
+|| .+|+.+.+++|+.
T Consensus 204 VGD~~~D~~aa~~Agv~ 220 (263)
T 2yj3_A 204 IGDGVNDAAALALADVS 220 (263)
Confidence 888 7999999999975
No 164
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=83.94 E-value=2.8 Score=48.94 Aligned_cols=94 Identities=21% Similarity=0.179 Sum_probs=66.4
Q ss_pred cCCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCC-----ceeEec-----------------CC
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPH-----GLVSFA-----------------DG 452 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~-----G~L~lr-----------------~g 452 (559)
.-.|| +++++.+.++.+++.|.+++.+||.....+..+-+-| |+.. +.+.+. .+
T Consensus 531 ~i~Dp-~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~l---GI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V 606 (920)
T 1mhs_A 531 PCMDP-PRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQL---GLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADG 606 (920)
T ss_dssp CCCCC-CCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHH---TSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSC
T ss_pred EEecc-ccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHc---CCCccccCccceeecCcccCCHHHHHHHHhhCeE
Confidence 34575 8999999999999999999999999887766654433 4321 111100 00
Q ss_pred -CCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCC
Q psy4654 453 -LSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 453 -~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~ 495 (559)
.+-.| ..|...++.|.+ .| .+++..|| .+|+.|.+++++-
T Consensus 607 ~arv~P-~~K~~iV~~Lq~-~g-~~Vam~GDGvNDapaLk~AdvG 648 (920)
T 1mhs_A 607 FAEVFP-QHKYNVVEILQQ-RG-YLVAMTGDGVNDAPSLKKADTG 648 (920)
T ss_dssp EESCCS-THHHHHHHHHHT-TT-CCCEECCCCGGGHHHHHHSSEE
T ss_pred EEEeCH-HHHHHHHHHHHh-CC-CeEEEEcCCcccHHHHHhCCcC
Confidence 01223 479999999964 33 57899999 8999999987654
No 165
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=83.85 E-value=0.28 Score=47.66 Aligned_cols=95 Identities=11% Similarity=0.003 Sum_probs=59.2
Q ss_pred cchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhh---CCCC--CceeEecCC-CCCChhhHHHHHHHHHhhccCC
Q psy4654 401 VRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQ---HNFP--HGLVSFADG-LSPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~q---hglP--~G~L~lr~g-~~~dp~~~K~~~L~~L~~~~~~ 474 (559)
+.+|+.++++.|+++|+++..+|.-+... .+..|+. .++. ++.++..+. ..++|..|.. +++.+ .+.-
T Consensus 131 ~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~---~~~~l~~~~~~~l~~~fd~i~~~~~~~KP~p~~~~~-~~~~l--g~~p 204 (261)
T 1yns_A 131 FFADVVPAVRKWREAGMKVYIYSSGSVEA---QKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRK-IADSI--GCST 204 (261)
T ss_dssp CCTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHH-HHHHH--TSCG
T ss_pred cCcCHHHHHHHHHhCCCeEEEEeCCCHHH---HHHHHHhhcccChHhhccEEEecCCCCCCCHHHHHH-HHHHh--CcCc
Confidence 56899999999999999999999877543 3344543 2343 333443321 2445555554 34444 2222
Q ss_pred cEEEEeCC-ccchhHHHhcCCCCCcEEEEcC
Q psy4654 475 VIHAAYGS-NKDVSVYTSVGLKPRSIYIVGK 504 (559)
Q Consensus 475 ~i~aafGN-~~DV~aYr~vGI~~~~If~i~~ 504 (559)
.=...+|| ..|+.+-+++|+.+ ..|+.
T Consensus 205 ~~~l~VgDs~~di~aA~~aG~~~---i~v~~ 232 (261)
T 1yns_A 205 NNILFLTDVTREASAAEEADVHV---AVVVR 232 (261)
T ss_dssp GGEEEEESCHHHHHHHHHTTCEE---EEECC
T ss_pred ccEEEEcCCHHHHHHHHHCCCEE---EEEeC
Confidence 22466788 68999999999863 34544
No 166
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=82.77 E-value=2.8 Score=40.51 Aligned_cols=18 Identities=22% Similarity=0.414 Sum_probs=15.2
Q ss_pred HHHhcCCCCCcEEEEcCC
Q psy4654 488 VYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 488 aYr~vGI~~~~If~i~~~ 505 (559)
+.+.+|++++++..||..
T Consensus 196 ~~~~lg~~p~~~l~VgDs 213 (261)
T 1yns_A 196 IADSIGCSTNNILFLTDV 213 (261)
T ss_dssp HHHHHTSCGGGEEEEESC
T ss_pred HHHHhCcCcccEEEEcCC
Confidence 445689999999999976
No 167
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=82.63 E-value=10 Score=37.70 Aligned_cols=102 Identities=13% Similarity=0.174 Sum_probs=62.0
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCCch---hhHHH---HHHHhhCCCCCce-eEecCCCCCChhhHHHHHHHHHhhc-c
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRPDM---QQGRV---LSWLSQHNFPHGL-VSFADGLSPGFLGHKASYLKSLIQD-H 472 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp~~---~~~~T---~~WL~qhglP~G~-L~lr~g~~~dp~~~K~~~L~~L~~~-~ 472 (559)
..++..++++|.++|| +|.|+++.... ..++. ++.|+++|++..+ +.+..+ ..+.+. =.+.++.++.. .
T Consensus 172 ~~~~~~a~~~L~~~G~r~I~~i~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~-~~~~~~-~~~~~~~ll~~~~ 249 (355)
T 3e3m_A 172 ERAAYDMTNALLARGFRKIVFLGEKDDDWTRGAARRAGFKRAMREAGLNPDQEIRLGAP-PLSIED-GVAAAELILQEYP 249 (355)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEESSCTTSHHHHHHHHHHHHHHHTTSCSCCEEEESCS-SCCHHH-HHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHCCCCeEEEEccCcccChhHHHHHHHHHHHHHHCCcCCCccEEEecC-CCCHHH-HHHHHHHHHcCCC
Confidence 6778888999999999 78999987542 33444 4566789998875 333321 112222 22334444432 2
Q ss_pred CCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 473 GVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 473 ~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
...-+.+..+ + -.+.+.++.|+. |..|-+||=.
T Consensus 250 ~~~ai~~~nD~~A~g~~~al~~~G~~vP~disvigfD 286 (355)
T 3e3m_A 250 DTDCIFCVSDMPAFGLLSRLKSIGVAVPEQVSVVGFG 286 (355)
T ss_dssp TCCEEEESSHHHHHHHHHHHHHHTCCTTTTCEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 2222333333 2 467788889987 6788888854
No 168
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=82.53 E-value=2.6 Score=45.23 Aligned_cols=78 Identities=15% Similarity=0.142 Sum_probs=58.2
Q ss_pred eCCCCeeEEEeeccceeccccc--cC--------------CC------------------cccchhHHHHHHHHHHCCCe
Q psy4654 373 VPPRTEVVVFSVDGSFTASVSV--TG--------------RD------------------PKVRAGAVDIVRHWQELGYL 418 (559)
Q Consensus 373 ~~~~~k~VIfDIDGTlt~sd~~--~g--------------~D------------------~~~~~GA~elv~~l~~~GY~ 418 (559)
......+.|.|+|.||..|... .+ +| -+.|||+.+.++.+. ++|+
T Consensus 22 l~~~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~~V~~RPgl~eFL~~ls-~~yE 100 (442)
T 3ef1_A 22 RQEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS-ELYE 100 (442)
T ss_dssp HHTTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHT-TTEE
T ss_pred HhcCCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceeeeeccCCceeEEEEEeCCCHHHHHHHHh-CCcE
Confidence 3456788999999999887431 10 00 124899999999997 6799
Q ss_pred EEEEecCCchhhHHHHHHHhhCC-CCCceeEecC
Q psy4654 419 IIYITGRPDMQQGRVLSWLSQHN-FPHGLVSFAD 451 (559)
Q Consensus 419 IIYLTaRp~~~~~~T~~WL~qhg-lP~G~L~lr~ 451 (559)
|++.|+-...+++...++|.-.+ +-.+.++.|+
T Consensus 101 ivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd 134 (442)
T 3ef1_A 101 LHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRD 134 (442)
T ss_dssp EEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTT
T ss_pred EEEEcCCCHHHHHHHHHHhccCCccccceEEEec
Confidence 99999999999999999999776 3333354454
No 169
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=82.52 E-value=0.41 Score=47.03 Aligned_cols=17 Identities=24% Similarity=0.464 Sum_probs=15.1
Q ss_pred CeeEEEeeccceecccc
Q psy4654 377 TEVVVFSVDGSFTASVS 393 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~ 393 (559)
.++||||.|||||++..
T Consensus 32 i~~viFD~dGTL~ds~~ 48 (287)
T 3a1c_A 32 VTAVIFDKTGTLTKGKP 48 (287)
T ss_dssp CCEEEEECCCCCBCSCC
T ss_pred CCEEEEeCCCCCcCCCE
Confidence 48999999999999864
No 170
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=81.17 E-value=0.32 Score=43.54 Aligned_cols=46 Identities=24% Similarity=0.295 Sum_probs=35.9
Q ss_pred EeEEEEecCCCCcEEEEEEEEeCCCccEEEecCCCCcCCCCccceEEEEc
Q psy4654 311 VDVHLIKEPPSGEWVLMSTEVTDKTGRVSYTLPEDHKLSYGMYPVKMVVR 360 (559)
Q Consensus 311 vdi~~~~~~~~g~w~~~~t~~t~s~gri~~~~p~~~~L~~G~y~vkmvV~ 360 (559)
|.|-++... |+.+.+-+||.|||+.-.++.+..+..|.|.+.|-+-
T Consensus 27 v~V~L~~~~----~~~l~~~~Tn~DGR~~~~~~~~~~~~~G~Y~l~F~tg 72 (121)
T 2h0e_A 27 VKIGLKRLG----ESIMKEVYTNNDGRVDVPLLAGEELMSGEYVMEFHAG 72 (121)
T ss_dssp CEEEEEETT----SCCCEEEECCTTSSCSSCSEEGGGCCSEEEEEEECHH
T ss_pred CEEEEEECC----ceEEEEEecCCCCCccCCcCCCCCcCceEEEEEEEhH
Confidence 555555541 9999999999999996655456668999999998763
No 171
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=79.23 E-value=3.1 Score=48.29 Aligned_cols=94 Identities=19% Similarity=0.143 Sum_probs=65.1
Q ss_pred CCCcccchhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCc----eeE--------ecC-----------C
Q psy4654 396 GRDPKVRAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHG----LVS--------FAD-----------G 452 (559)
Q Consensus 396 g~D~~~~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G----~L~--------lr~-----------g 452 (559)
-.|| +++++.+.++.+++.|.+++.+||.....+..+-+ +-|+... .++ +.+ +
T Consensus 485 i~Dp-~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~---~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v 560 (885)
T 3b8c_A 485 LFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR---RLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADG 560 (885)
T ss_dssp ECCC-CCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHH---TTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCC
T ss_pred eecc-cchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHH---HhCCccccCCcceeeccccccccchhHHHHHHhhCcE
Confidence 3575 89999999999999999999999998755544322 2355321 110 000 0
Q ss_pred -CCCChhhHHHHHHHHHhhccCCcEEEEeCC-ccchhHHHhcCCCC
Q psy4654 453 -LSPGFLGHKASYLKSLIQDHGVVIHAAYGS-NKDVSVYTSVGLKP 496 (559)
Q Consensus 453 -~~~dp~~~K~~~L~~L~~~~~~~i~aafGN-~~DV~aYr~vGI~~ 496 (559)
.+-.| ..|...++.|.+ .+ .+++..|| .+|+.+.+++++..
T Consensus 561 ~arv~P-~~K~~iV~~lq~-~g-~~Vam~GDGvNDapaLk~AdvGI 603 (885)
T 3b8c_A 561 FAGVFP-EHKYEIVKKLQE-RK-HIVGMTGDGVNDAPALKKADIGI 603 (885)
T ss_dssp EECCCH-HHHHHHHHHHHH-TT-CCCCBCCCSSTTHHHHHHSSSCC
T ss_pred EEEECH-HHHHHHHHHHHH-CC-CeEEEEcCCchhHHHHHhCCEeE
Confidence 02235 589999999964 23 57889999 89999999866543
No 172
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=79.20 E-value=13 Score=35.30 Aligned_cols=107 Identities=16% Similarity=0.118 Sum_probs=63.3
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCch--hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSL 468 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L 468 (559)
++.| -..++..+.+++.++|| +|.|+++.+.. ..++. ++.|+++|++........+ ..+++. -.+.++++
T Consensus 111 V~~D--~~~~g~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~-~~~~~~-~~~~~~~~ 186 (292)
T 3k4h_A 111 VDND--NYTAAREVAEYLISLGHKQIAFIGGGSDLLVTRDRLAGMSDALKLADIVLPKEYILHF-DFSRES-GQQAVEEL 186 (292)
T ss_dssp EECC--HHHHHHHHHHHHHHTTCCCEEEEESCTTBHHHHHHHHHHHHHHHHTTCCCCGGGEEEC-CSSHHH-HHHHHHHH
T ss_pred EEEC--cHHHHHHHHHHHHHCCCceEEEEeCcccchhHHHHHHHHHHHHHHcCCCCChheEEec-CCCHHH-HHHHHHHH
Confidence 4555 35677888899999999 69999988653 23333 4566788988654332221 122322 23345555
Q ss_pred hhcc-CCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 469 IQDH-GVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 469 ~~~~-~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
+... ...-+.+..+ + -.+.+.++.|+. |..|-+||-.
T Consensus 187 l~~~~~~~ai~~~~d~~a~g~~~al~~~g~~vP~di~vig~d 228 (292)
T 3k4h_A 187 MGLQQPPTAIMATDDLIGLGVLSALSKKGFVVPKDVSIVSFN 228 (292)
T ss_dssp HTSSSCCSEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred HcCCCCCcEEEEcChHHHHHHHHHHHHhCCCCCCeEEEEEec
Confidence 4321 2322333333 2 577788889987 5677777643
No 173
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=78.79 E-value=13 Score=35.15 Aligned_cols=106 Identities=15% Similarity=0.130 Sum_probs=63.7
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCchhhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhh
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPDMQQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQ 470 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~~~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~ 470 (559)
++.| -..++..+.+.+.++|+ +|.|+++.+....++. ++.|++++++........ ..+++.- .+.+++++.
T Consensus 98 V~~D--~~~~g~~a~~~L~~~G~~~i~~i~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~l~ 172 (280)
T 3gyb_A 98 VAND--DFRGAEIATKHLIDLGHTHIAHLRVGSGAGLRRFESFEATMRAHGLEPLSNDYLG--PAVEHAG-YTETLALLK 172 (280)
T ss_dssp EEEC--HHHHHHHHHHHHHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHTTCCCEECCCCS--CCCHHHH-HHHHHHHHH
T ss_pred EEec--hHHHHHHHHHHHHHCCCCeEEEEeCCCchHHHHHHHHHHHHHHcCcCCCcccccC--CCCHHHH-HHHHHHHHh
Confidence 4455 35677888899999998 6999999876543343 445678898876544322 2233222 233444433
Q ss_pred c-cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 471 D-HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 471 ~-~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
. ....-+.+..+ + -.+.+.++.|+. |..|-+||-.
T Consensus 173 ~~~~~~ai~~~~d~~a~g~~~al~~~g~~vP~di~vvg~d 212 (280)
T 3gyb_A 173 EHPEVTAIFSSNDITAIGALGAARELGLRVPEDLSIIGYD 212 (280)
T ss_dssp HCTTCCEEEESSHHHHHHHHHHHHHHTCCTTTTCEEEEES
T ss_pred CCCCCCEEEECChHHHHHHHHHHHHcCCCCCCeeEEEEEC
Confidence 2 22333333344 2 467788889987 5677777744
No 174
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=76.14 E-value=12 Score=35.99 Aligned_cols=107 Identities=17% Similarity=0.099 Sum_probs=63.1
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCch--hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSL 468 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L 468 (559)
++.| -..++..+.++|.++|| +|.|+++.+.. ..++. ++.|+++|++........+ ..+.+.- .+.++++
T Consensus 106 V~~D--~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~-~~~~~~~-~~~~~~~ 181 (294)
T 3qk7_A 106 FDFD--NHAGASLAVKRLLELGHQRIAFVSTDARISYVDQRLQGYVQTMSEAGLMPLAGYLQKA-DPTRPGG-YLAASRL 181 (294)
T ss_dssp EEEC--HHHHHHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHHHHHHHTTTCCCCTTCEEEE-CSSHHHH-HHHHHHH
T ss_pred EEcC--hHHHHHHHHHHHHHCCCceEEEEeCCcccchHHHHHHHHHHHHHHCCCCCChhHeecC-CCCHHHH-HHHHHHH
Confidence 4445 36778888999999999 69999998643 33343 4566789988655322211 1222222 2344555
Q ss_pred hhc-cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 469 IQD-HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 469 ~~~-~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
+.. ....-+.+..+ + -.+.+.++.|+. |..|-+||=.
T Consensus 182 l~~~~~~~ai~~~nd~~A~g~~~al~~~G~~vP~di~vig~D 223 (294)
T 3qk7_A 182 LALEVPPTAIITDCNMLGDGVASALDKAGLLGGEGISLIAYD 223 (294)
T ss_dssp HHSSSCCSEEEESSHHHHHHHHHHHHHTTCSSTTSCEEEEET
T ss_pred HcCCCCCcEEEECCHHHHHHHHHHHHHcCCCCCCceEEEeec
Confidence 432 22333333333 2 467788889987 5677777743
No 175
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=74.68 E-value=16 Score=35.90 Aligned_cols=102 Identities=13% Similarity=0.176 Sum_probs=61.8
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCC--c-hhhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhcc-C
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRP--D-MQQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQDH-G 473 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp--~-~~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~~-~ 473 (559)
..++..+.++|.++|| +|.|+++.. . ...++. ++.|+++|++........+ ..+.+. -.+.+++++... .
T Consensus 170 ~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~-~~~~~~-~~~~~~~ll~~~~~ 247 (344)
T 3kjx_A 170 RRAGREMAQAILKAGYRRIGFMGTKMPLDYRARKRFEGFTEVLGKNGVEIEDREFYSG-GSALAK-GREMTQAMLERSPD 247 (344)
T ss_dssp HHHHHHHHHHHHHHTCCSCCEEESSTTTCHHHHHHHHHHHHHHHHTTCCCSCEEECSS-CCCHHH-HHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCcccCccHHHHHHHHHHHHHHcCCCCChheEEeC-CCCHHH-HHHHHHHHHhcCCC
Confidence 6677888899999999 788999875 2 233333 5667789998776655432 122221 223444444321 2
Q ss_pred CcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 474 VVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 474 ~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
..-+.+..+ + -.+.+.++.|+. |..|-+||=.
T Consensus 248 ~~ai~~~nd~~A~g~~~al~~~g~~vP~disvvg~D 283 (344)
T 3kjx_A 248 LDFLYYSNDMIAAGGLLYLLEQGIDIPGQIGLAGFN 283 (344)
T ss_dssp CCEEEESSHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred CCEEEECCHHHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 322333333 2 466778889987 4788888843
No 176
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=74.17 E-value=23 Score=34.72 Aligned_cols=107 Identities=18% Similarity=0.169 Sum_probs=64.1
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCch--hhHH---HHHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPDM--QQGR---VLSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSL 468 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~---T~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L 468 (559)
++.| -..++....++|.++|| +|.|+++.... ..++ -++.|+++|++..+.....+ ..+++. =.+.++.+
T Consensus 161 V~~D--~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~-~~~~~~-~~~~~~~l 236 (338)
T 3dbi_A 161 VWCD--HKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIANG-KWTPAS-GAEGVEML 236 (338)
T ss_dssp ECBC--HHHHHHHHHHHHHHTTCCSEEEECCCTTCHHHHHHHHHHHHHHHHTTCCCCGGGEECC-CSSHHH-HHHHHHHH
T ss_pred EEEC--hHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHHHCCCCCCcceEEeC-CCCHHH-HHHHHHHH
Confidence 4555 36778888999999999 79999987543 2233 35667789998765433222 122222 22344455
Q ss_pred hhc-cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 469 IQD-HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 469 ~~~-~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
+.. ....-+.+..+ + -.+.+.++.|+. |..|-+||=.
T Consensus 237 l~~~~~~~ai~~~nd~~A~g~~~al~~~G~~vP~di~vvg~D 278 (338)
T 3dbi_A 237 LERGAKFSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFD 278 (338)
T ss_dssp HHTTCCCSEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred HcCCCCCeEEEECChHHHHHHHHHHHHcCCCCCCCeEEEEEC
Confidence 432 22322333333 2 467788899987 5678888743
No 177
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=74.02 E-value=15 Score=35.36 Aligned_cols=107 Identities=21% Similarity=0.206 Sum_probs=62.8
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCch--hhHH---HHHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPDM--QQGR---VLSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSL 468 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~---T~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L 468 (559)
++.| -..++....++|.++|| +|.|+++.... ..++ -++.|+++|++........+ ..+.+. -.+.++++
T Consensus 111 V~~D--~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~-~~~~~~-~~~~~~~l 186 (303)
T 3kke_A 111 VILD--DQKGGGIATEHLITLGHSRIAFISGTAIHDTAQRRKEGYLETLASAGLRSEAAWVVDA-GWEADA-GSAALNTL 186 (303)
T ss_dssp EEEC--HHHHHHHHHHHHHHTTCCSEEEEESCSSCHHHHHHHHHHHHHHHHTTCCCCGGGEEEC-CSSHHH-HHHHHHHH
T ss_pred EEEC--cHHHHHHHHHHHHHCCCCeEEEEeCCCcCccHHHHHHHHHHHHHHcCCCCCcceEEec-CCChHH-HHHHHHHh
Confidence 3444 36677888999999999 78999987653 2333 34567789998765322221 122222 22334444
Q ss_pred -----hhc-cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 469 -----IQD-HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 469 -----~~~-~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
+.. ....-+.+..+ + -.+.+.++.|+. |..|-+||=.
T Consensus 187 ~~~~~l~~~~~~~ai~~~nd~~A~g~~~al~~~G~~vP~di~vig~D 233 (303)
T 3kke_A 187 YRGANLGKPDGPTAVVVASVNAAVGALSTALRLGLRVPEDLSIVGIN 233 (303)
T ss_dssp HHHHCTTSTTSCSEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred cchhhhcCCCCCcEEEECCHHHHHHHHHHHHHcCCCCCCceEEEEEc
Confidence 432 12333333333 2 467788899987 5678777743
No 178
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=74.01 E-value=14 Score=35.02 Aligned_cols=102 Identities=12% Similarity=0.014 Sum_probs=60.5
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCCch--hhHH---HHHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhc-cCC
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRPDM--QQGR---VLSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQD-HGV 474 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~---T~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~-~~~ 474 (559)
..++..++++|.++|| +|.|+++.+.. ..++ -++.|+++|++........+ ..+++.- .+.+++++.. ...
T Consensus 112 ~~~~~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~l~~~~~~ 189 (289)
T 3g85_A 112 YKMGEKASLLFAKKRYKSAAAILTESLNDAMDNRNKGFIETCHKNGIKISENHIIAA-ENSIHGG-VDAAKKLMKLKNTP 189 (289)
T ss_dssp HHHHHHHHHHHHHTTCCBCEEEECCCSSHHHHHHHHHHHHHHHHTTCBCCGGGEEEC-CSSHHHH-HHHHHHHTTSSSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCcccccHHHHHHHHHHHHHHcCCCCChhheecc-CCCHHHH-HHHHHHHHcCCCCC
Confidence 6677888999999999 69999987643 2333 35667789988665332221 1222222 2334455432 123
Q ss_pred cEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 475 VIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 475 ~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
.-+.+..+ + -.+.+.++.|+. |..|-+||-.
T Consensus 190 ~ai~~~~d~~a~g~~~al~~~g~~vP~di~vig~d 224 (289)
T 3g85_A 190 KALFCNSDSIALGVISVLNKRQISIPDDIEIVAIG 224 (289)
T ss_dssp SEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEEEE
T ss_pred cEEEEcCCHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 33333333 2 467888899987 5677776643
No 179
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=73.17 E-value=4.6 Score=35.82 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=27.2
Q ss_pred EEEEEEEeCCCccEEEecCCCCcCCCCccceEEEEc
Q psy4654 325 VLMSTEVTDKTGRVSYTLPEDHKLSYGMYPVKMVVR 360 (559)
Q Consensus 325 ~~~~t~~t~s~gri~~~~p~~~~L~~G~y~vkmvV~ 360 (559)
+.+.+-+||.|||+. .++ ...+..|.|.+.|-+.
T Consensus 37 ~~l~~~~Tn~DGR~~-~l~-~~~~~~G~Y~L~F~tg 70 (116)
T 3qva_A 37 ETLANLVTNAQGRIA-TFS-AAPLPAGRYCLTAETG 70 (116)
T ss_dssp EEEEEEECCTTSEEC-CSC-SSCBCSSEEEEEECHH
T ss_pred EeEEEeccCCCCCcc-ccc-cccCCCceEEEEEeHH
Confidence 679999999999994 243 3458999999999773
No 180
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=72.08 E-value=38 Score=31.58 Aligned_cols=108 Identities=18% Similarity=0.107 Sum_probs=63.6
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCch--hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSL 468 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L 468 (559)
++.| -..++..+.+++.++|| +|.|+++.+.. ..++. ++.|+++|++........+ ..+++. -.+.++++
T Consensus 100 V~~d--~~~~~~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~-~~~~~~-~~~~~~~~ 175 (275)
T 3d8u_A 100 IGVD--HFEVGKACTRHLIEQGFKNVGFIGARGNHSTLQRQLHGWQSAMIENYLTPDHFLTTHE-APSSQL-GAEGLAKL 175 (275)
T ss_dssp ECBC--HHHHHHHHHHHHHTTTCCCEEEEECSCSSHHHHHHHHHHHHHHHHTTCCCCCEEECSS-CCCHHH-HHHHHHHH
T ss_pred EEEC--hHHHHHHHHHHHHHCCCCeEEEEcCCCCCchHHHHHHHHHHHHHHcCCCCCccEEEeC-CCChhH-HHHHHHHH
Confidence 4555 35667788899999998 68899987542 23333 4567789988665443221 122322 22345555
Q ss_pred hhc-cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCCC
Q psy4654 469 IQD-HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKVS 506 (559)
Q Consensus 469 ~~~-~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~~ 506 (559)
+.. ....-+.+..+ + -.+.+.++.|+. |..|-+||=.+
T Consensus 176 l~~~~~~~ai~~~~d~~a~g~~~al~~~g~~vP~di~vvg~d~ 218 (275)
T 3d8u_A 176 LLRDSSLNALVCSHEEIAIGALFECHRRVLKVPTDIAIICLEG 218 (275)
T ss_dssp HTTCTTCCEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEESSC
T ss_pred HhCCCCCCEEEEcCcHHHHHHHHHHHHcCCCCCCceEEEecCC
Confidence 432 12333333444 2 466778889986 56787877543
No 181
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=68.66 E-value=34 Score=32.62 Aligned_cols=104 Identities=21% Similarity=0.235 Sum_probs=62.8
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCch-hhHH---HHHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHh
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPDM-QQGR---VLSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLI 469 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~~-~~~~---T~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~ 469 (559)
++.| -..++....++|.++|| +|.|+++.... ..++ -++.|+++|++........ ..+++. -.+.+++++
T Consensus 106 V~~D--~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~--~~~~~~-~~~~~~~~l 180 (289)
T 3k9c_A 106 VRGD--DVAGITLAVDHLTELGHRNIAHIDGADAPGGADRRAGFLAAMDRHGLSASATVVTG--GTTETE-GAEGMHTLL 180 (289)
T ss_dssp EEEC--HHHHHHHHHHHHHHTTCCSEEEECCTTSTTHHHHHHHHHHHHHHTTCGGGEEEECC--CSSHHH-HHHHHHHHH
T ss_pred EEeC--hHHHHHHHHHHHHHCCCCcEEEEeCCCCccHHHHHHHHHHHHHHCCCCCCccEEEC--CCCHHH-HHHHHHHHH
Confidence 4445 36677888999999999 79999987643 2233 3456778999876533332 222322 223445554
Q ss_pred hc-cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEc
Q psy4654 470 QD-HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVG 503 (559)
Q Consensus 470 ~~-~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~ 503 (559)
.. ....-+.+..+ + -.+.+.++.|+. |..|-+||
T Consensus 181 ~~~~~~~ai~~~~d~~A~g~~~al~~~g~~vP~di~vig 219 (289)
T 3k9c_A 181 EMPTPPTAVVAFNDRCATGVLDLLVRSGRDVPADISVVG 219 (289)
T ss_dssp TSSSCCSEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEE
T ss_pred cCCCCCCEEEECChHHHHHHHHHHHHcCCCCCCceEEEE
Confidence 32 22333333333 2 467788889987 56777777
No 182
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=68.06 E-value=16 Score=36.30 Aligned_cols=101 Identities=15% Similarity=0.094 Sum_probs=58.8
Q ss_pred cchhHHHHHHHHHHCCC-eEEEEecC-------------------CchhhHH---HHHHHhhCCCCCcee--EecCCCCC
Q psy4654 401 VRAGAVDIVRHWQELGY-LIIYITGR-------------------PDMQQGR---VLSWLSQHNFPHGLV--SFADGLSP 455 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY-~IIYLTaR-------------------p~~~~~~---T~~WL~qhglP~G~L--~lr~g~~~ 455 (559)
-..++..++++|.++|| +|.|++++ .....++ -++.|+++|++.... +..+ ..
T Consensus 173 ~~~~~~~a~~~L~~~G~r~I~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~--~~ 250 (366)
T 3h5t_A 173 NRKAIAPAAQALIDAGHRKIGILSIRLDRANNDGEVTRERLENAQYQVQRDRVRGAMEVFIEAGIDPGTVPIMECW--IN 250 (366)
T ss_dssp HHHHTHHHHHHHHHTTCCSEEEEEECCSSSCCCEECCHHHHHTCCCTTHHHHHHHHHHHHHHHTCCGGGSCEEEES--SC
T ss_pred hHHHHHHHHHHHHHCCCCcEEEEecccccccccCccccccccccccchHHHHHHHHHHHHHHCCCCCCcceEEEcC--CC
Confidence 36677888999999999 68899842 1122333 456778899987753 2222 12
Q ss_pred ChhhHHHHHHHHHhhc-cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcC
Q psy4654 456 GFLGHKASYLKSLIQD-HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGK 504 (559)
Q Consensus 456 dp~~~K~~~L~~L~~~-~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~ 504 (559)
+++. -.+.++.++.. ....-+.+..+ + -.+.+.++.|+. |..|-+||=
T Consensus 251 ~~~~-~~~~~~~ll~~~~~~~ai~~~nD~~A~g~~~al~~~G~~vP~disvigf 303 (366)
T 3h5t_A 251 NRQH-NFEVAKELLETHPDLTAVLCTVDALAFGVLEYLKSVGKSAPADLSLTGF 303 (366)
T ss_dssp CHHH-HHHHHHHHHHHCTTCCEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEEE
T ss_pred CHHH-HHHHHHHHHcCCCCCcEEEECCcHHHHHHHHHHHHcCCCCCCceEEEEE
Confidence 2222 22344454432 12222333333 2 466788889987 567777773
No 183
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=67.86 E-value=15 Score=35.27 Aligned_cols=105 Identities=19% Similarity=0.160 Sum_probs=62.7
Q ss_pred cchhHHHHHHHHHHCCC-eEEEEecCCchh--hHH---HHHHHhhCCCCCceeEecCC----CCCChhhHHHHHHHHHhh
Q psy4654 401 VRAGAVDIVRHWQELGY-LIIYITGRPDMQ--QGR---VLSWLSQHNFPHGLVSFADG----LSPGFLGHKASYLKSLIQ 470 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY-~IIYLTaRp~~~--~~~---T~~WL~qhglP~G~L~lr~g----~~~dp~~~K~~~L~~L~~ 470 (559)
-..++..+.++|.++|| +|.|+++.+... .++ -++.|+++|++........+ ...+. .+-.+.+++++.
T Consensus 115 ~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 193 (301)
T 3miz_A 115 DYQGARDLTRYLLERGHRRIGYIRLNPILLGAELRLDAFRRTTSEFGLTENDLSISLGMDGPVGAEN-NYVFAAATEMLK 193 (301)
T ss_dssp HHHHHHHHHHHHHTTTCCSEEEEECCTTSHHHHHHHHHHHHHHHHHTCCGGGEEEEECEESSTTSCE-ECHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHcCCCeEEEEecCccchhHHHHHHHHHHHHHHcCCCCCcceEEEcCCCCcCccc-cHHHHHHHHHHc
Confidence 36677888999999999 789999876542 233 35567789998766443322 11111 111134455543
Q ss_pred c-cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCCC
Q psy4654 471 D-HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKVS 506 (559)
Q Consensus 471 ~-~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~~ 506 (559)
. ....-+.+..+ + -.+.+.++.|+. |..|-+||=..
T Consensus 194 ~~~~~~ai~~~~d~~A~g~~~al~~~g~~vP~di~vig~D~ 234 (301)
T 3miz_A 194 QDDRPTAIMSGNDEMAIQIYIAAMALGLRIPQDVSIVGFDD 234 (301)
T ss_dssp STTCCSEEEESSHHHHHHHHHHHHTTTCCHHHHCEEECSBC
T ss_pred CCCCCcEEEECCHHHHHHHHHHHHHcCCCCCCCeeEEEeCC
Confidence 2 12322333333 2 467788899997 56788887543
No 184
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=67.84 E-value=17 Score=34.61 Aligned_cols=107 Identities=15% Similarity=0.074 Sum_probs=61.1
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCch--hhHH---HHHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPDM--QQGR---VLSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSL 468 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~---T~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L 468 (559)
++.| -..++..+.++|.++|+ +|.|+++.+.. ..++ -++.|+++|++........+ ..+.+.-. +.++++
T Consensus 105 V~~D--~~~~g~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~-~~~~~~~~-~~~~~~ 180 (291)
T 3egc_A 105 VLSE--NVRGARTAVEYLIARGHTRIGAIVGSAGLMTSRERLKGFRAAMSAAGLPVRQEWIAAG-GVRADNGR-DGAIKV 180 (291)
T ss_dssp EEEC--HHHHHHHHHHHHHHTTCCSEEEECSCTTSHHHHHHHHHHHHHHHHTTCCCCGGGEEC-------CCH-HHHHHH
T ss_pred EEEC--cHHHHHHHHHHHHHcCCCEEEEEeCCCCCcCHHHHHHHHHHHHHHcCCCCCHHHeEeC-CCChhHHH-HHHHHH
Confidence 3445 35677888899999999 79999998642 2333 35567789988765333221 11111112 234444
Q ss_pred hh-ccCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 469 IQ-DHGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 469 ~~-~~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
+. .....-+.+..+ + -.+.+.++.|+. |..|-+||=.
T Consensus 181 l~~~~~~~ai~~~~d~~a~g~~~al~~~g~~vP~di~vvg~d 222 (291)
T 3egc_A 181 LTGADRPTALLTSSHRITEGAMQALNVLGLRYGPDVEIVSFD 222 (291)
T ss_dssp HTC-CCCSEEEESSHHHHHHHHHHHHHHTCCBTTTBEEEEES
T ss_pred HhCCCCCcEEEECCcHHHHHHHHHHHHcCCCCCCceEEEEec
Confidence 42 122333333333 2 467788889987 6678787743
No 185
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=67.77 E-value=17 Score=33.96 Aligned_cols=105 Identities=13% Similarity=0.061 Sum_probs=59.1
Q ss_pred cCCCcccchhHHHHHHHHHHC----CC-eEEEEecCCch--hhHHH---HHHHhhC-CCCCceeEecCCCCCChhhHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQEL----GY-LIIYITGRPDM--QQGRV---LSWLSQH-NFPHGLVSFADGLSPGFLGHKAS 463 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~----GY-~IIYLTaRp~~--~~~~T---~~WL~qh-glP~G~L~lr~g~~~dp~~~K~~ 463 (559)
++.| ...++..+.+++.++ |+ +|.|+++.+.. ..++. ++.|+++ |++...+... ..+.+.-. +
T Consensus 103 V~~d--~~~~g~~~~~~l~~~~~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~---~~~~~~~~-~ 176 (276)
T 3ksm_A 103 VATD--NYAAGQLAARALLATLDLSKERNIALLRLRAGNASTDQREQGFLDVLRKHDKIRIIAAPYA---GDDRGAAR-S 176 (276)
T ss_dssp EECC--HHHHHHHHHHHHHHHSCTTSCEEEEECBCCTTCHHHHHHHHHHHHHHTTCTTEEEEECCBC---CSSHHHHH-H
T ss_pred EccC--HHHHHHHHHHHHHHhcCcCCCceEEEEEcCCCchhHHHHHHHHHHHHHhCCCcEEEEEecC---CCcHHHHH-H
Confidence 4555 356777888899888 88 68899887543 33344 4455666 6654322211 22332222 2
Q ss_pred HHHHHhhc-cCCcEEEEeCC--c-cchhHHHhcCCCCCcEEEEcCCC
Q psy4654 464 YLKSLIQD-HGVVIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGKVS 506 (559)
Q Consensus 464 ~L~~L~~~-~~~~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~~~ 506 (559)
.+++++.. ....-+.+..+ + -.+.+.++.|+ +..|.+||-.+
T Consensus 177 ~~~~~l~~~~~~~ai~~~~d~~a~g~~~al~~~g~-p~di~vig~d~ 222 (276)
T 3ksm_A 177 EMLRLLKETPTIDGLFTPNESTTIGALVAIRQSGM-SKQFGFIGFDQ 222 (276)
T ss_dssp HHHHHHHHCSCCCEEECCSHHHHHHHHHHHHHTTC-TTSSEEEEESC
T ss_pred HHHHHHHhCCCceEEEECCchhhhHHHHHHHHcCC-CCCeEEEEeCC
Confidence 33444332 23333333333 2 36778889999 78888887543
No 186
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=67.37 E-value=26 Score=33.27 Aligned_cols=101 Identities=14% Similarity=0.071 Sum_probs=60.2
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCCch--hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhcc-CC
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQDH-GV 474 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~~-~~ 474 (559)
..++..++++|.++|| +|.|+++.+.. ..++. ++.|+++|++........+ ..+.+. -.+.+++++... ..
T Consensus 112 ~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~-~~~~~~-~~~~~~~~l~~~~~~ 189 (288)
T 3gv0_A 112 EAYAYEAVERLAQCGRKRIAVIVPPSRFSFHDHARKGFNRGIRDFGLTEFPIDAVTI-ETPLEK-IRDFGQRLMQSSDRP 189 (288)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCTTSHHHHHHHHHHHHHHHHTTCEECCCCSCCT-TSCHHH-HHHHHHHHTTSSSCC
T ss_pred HHHHHHHHHHHHHCCCCeEEEEcCCcccchHHHHHHHHHHHHHHcCCCcchhheecc-ccchHH-HHHHHHHHHhCCCCC
Confidence 5677888999999999 78999998653 23333 4566788887654432221 122222 223455554321 23
Q ss_pred cEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcC
Q psy4654 475 VIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGK 504 (559)
Q Consensus 475 ~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~ 504 (559)
.-+.+..+ + -.+.+.++.|+. |..|-+||=
T Consensus 190 ~ai~~~~d~~A~g~~~al~~~g~~vP~di~vig~ 223 (288)
T 3gv0_A 190 DGIVSISGSSTIALVAGFEAAGVKIGEDVDIVSK 223 (288)
T ss_dssp SEEEESCHHHHHHHHHHHHTTTCCTTTSCEEEEE
T ss_pred cEEEEcCcHHHHHHHHHHHHcCCCCCCceEEEEe
Confidence 33333344 2 467788889987 567777763
No 187
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=66.45 E-value=35 Score=33.43 Aligned_cols=100 Identities=16% Similarity=0.169 Sum_probs=58.6
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCCch--hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhc-cCC
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQD-HGV 474 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~-~~~ 474 (559)
..++..+.++|.++|| +|.|+++.+.. ..++. ++.|+++|++..+.....+ ..+++. -...+++++.. ...
T Consensus 162 ~~~~~~a~~~L~~~G~~~I~~i~g~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~-~~~~~~-~~~~~~~ll~~~~~~ 239 (340)
T 1qpz_A 162 FEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQG-DFEPES-GYRAMQQILSQPHRP 239 (340)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCCTTSHHHHHHHHHHHHHHHHTTCCCCGGGBCCC-CSSHHH-HHHHHHHHHTSSSCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHHHHHHHHHHCCCCCChhheEeC-CCCHHH-HHHHHHHHHcCCCCC
Confidence 5667788888888899 68899987542 23333 4567789988654332222 122222 22345555432 223
Q ss_pred cEEEEeCC--c-cchhHHHhcCCC-CCcEEEEc
Q psy4654 475 VIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVG 503 (559)
Q Consensus 475 ~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~ 503 (559)
.-+.+..+ + -.+.+.++.|+. |..|-+||
T Consensus 240 ~ai~~~nd~~A~g~~~al~~~G~~vP~disvig 272 (340)
T 1qpz_A 240 TAVFCGGDIMAMGALCAADEMGLRVPQDVSLIG 272 (340)
T ss_dssp SEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEE
T ss_pred cEEEECCHHHHHHHHHHHHHcCCCCCCCeEEEe
Confidence 33333333 2 356778889987 56787777
No 188
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=66.17 E-value=37 Score=34.58 Aligned_cols=107 Identities=11% Similarity=0.058 Sum_probs=61.1
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCch----hhHHH---HHHHhhCCCCCceeEecCCC-CCChhhHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPDM----QQGRV---LSWLSQHNFPHGLVSFADGL-SPGFLGHKASYL 465 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~~----~~~~T---~~WL~qhglP~G~L~lr~g~-~~dp~~~K~~~L 465 (559)
++.| -..++..++++|.++|| +|.|+++.... ..++. ++.|+++|++... +..... ..+.+. -.+.+
T Consensus 119 V~~D--~~~~g~~a~~~L~~~G~r~I~~i~~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~-~~~~~~~~~~~~~-~~~~~ 194 (412)
T 4fe7_A 119 IATD--NYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVV-YQGLETAPENWQH-AQNRL 194 (412)
T ss_dssp EEEC--HHHHHHHHHHHHHHTTCCEEEEECCCTTSCCHHHHHHHHHHHHHHTTSSSCCEE-ECCSCSSCSSHHH-HHHHH
T ss_pred EEeC--HHHHHHHHHHHHHHcCCceEEEecccccccccHHHHHHHHHHHHHHHcCCCccc-cccccccccchhh-HHHHH
Confidence 4445 36677888999999999 78899988653 33343 4566788987542 221111 112211 22334
Q ss_pred HHHhhc-cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 466 KSLIQD-HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 466 ~~L~~~-~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
.+++.. ....-+.+..+ + -.+.+.++.|+. |..|-+||=.
T Consensus 195 ~~~l~~~~~~~aI~~~nD~~A~g~~~al~~~G~~vP~disvig~D 239 (412)
T 4fe7_A 195 ADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGID 239 (412)
T ss_dssp HHHHHHSCTTEEEEESSHHHHHHHHHHHHHHTCCTTTTSEEEESS
T ss_pred HHHHHhCCCCeEEEEEecHHHHHHHHHHHHcCCCCCceEEEEeec
Confidence 444332 22322333333 2 356778889986 6778888743
No 189
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=65.70 E-value=41 Score=31.38 Aligned_cols=124 Identities=14% Similarity=0.068 Sum_probs=68.8
Q ss_pred CCCCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCC-eEEEEecCC-c-----hhh-HHH---HHHHhhCCC
Q psy4654 374 PPRTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGY-LIIYITGRP-D-----MQQ-GRV---LSWLSQHNF 442 (559)
Q Consensus 374 ~~~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp-~-----~~~-~~T---~~WL~qhgl 442 (559)
..+.++|++|-+ ... ...++.| -..++..+.+++.++|| +|.|+++.+ . ... ++. ++.|+++|+
T Consensus 76 ~~~iPvV~~~~~--~~~-~~~V~~d--~~~~~~~a~~~L~~~G~~~i~~i~~~~~~~~~~~~~~~~R~~gf~~~l~~~g~ 150 (276)
T 2h0a_A 76 PTERPVVLVDAQ--NPR-YDSVYLD--NRLGGRLAGAYLARFPGPIFAIAVEEEPDRAFRRTVFAERMAGFQEALKEAGR 150 (276)
T ss_dssp SCSSCEEEESSC--CTT-SEEEEEC--SHHHHHHHHHHHTTSSSCEEEEEECCSCCC---CCHHHHHHHHHHHHHHHTTC
T ss_pred hcCCCEEEEecc--CCC-CCEEEEc--cHHHHHHHHHHHHHcCCCeEEEEecCcccccccchhHHHHHHHHHHHHHHcCC
Confidence 445677776533 111 2234555 35677888899999998 788999875 3 223 343 456678898
Q ss_pred CCcee-EecCCCCCChhhHHHHHHHHHhhcc-CCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 443 PHGLV-SFADGLSPGFLGHKASYLKSLIQDH-GVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 443 P~G~L-~lr~g~~~dp~~~K~~~L~~L~~~~-~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
+.... .... ..+.+. -.+.+++++... ...-+.+..+ + -.+.+.++.|+. |..|-+||-.
T Consensus 151 ~~~~~~~~~~--~~~~~~-~~~~~~~~l~~~~~~~ai~~~~d~~a~g~~~al~~~g~~vP~di~vvg~d 216 (276)
T 2h0a_A 151 PFSPDRLYIT--RHSQEG-GRLALRHFLEKASPPLNVFAGADQVALGVLEEAVRLGLTPGRDVRVLGFD 216 (276)
T ss_dssp CCCGGGEEEE--CSSHHH-HHHHHHHHHTTCCSSEEEECSSHHHHHHHHHHHHTTSCTTTTSEEEEEES
T ss_pred CCChHHeeec--CCChHH-HHHHHHHHHhCCCCCCEEEECCcHHHHHHHHHHHHcCCCCCCCeEEEEeC
Confidence 76542 2222 112222 223455554321 2222223333 2 466778889986 5677777643
No 190
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=65.25 E-value=54 Score=32.02 Aligned_cols=103 Identities=16% Similarity=0.156 Sum_probs=59.1
Q ss_pred cchhHHHHHHHHHHCCC-eEEEEecCCch-hhHH---HHHHHhhCCCCC-ceeEecCCCCCChhhHHHHHHHHHhhc-cC
Q psy4654 401 VRAGAVDIVRHWQELGY-LIIYITGRPDM-QQGR---VLSWLSQHNFPH-GLVSFADGLSPGFLGHKASYLKSLIQD-HG 473 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY-~IIYLTaRp~~-~~~~---T~~WL~qhglP~-G~L~lr~g~~~dp~~~K~~~L~~L~~~-~~ 473 (559)
-..++..++++|.++|| +|.|+++.... ..++ -++.|+++|++. .......+ ..+.+. -.+.++.++.. ..
T Consensus 162 ~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~-~~~~~~-~~~~~~~ll~~~~~ 239 (339)
T 3h5o_A 162 QEDAGAAITRHLLSRGKRRIGFLGAQLDERVMKRLDGYRAALDAADCRDAGLEWLDPQ-PSSMQM-GADMLDRALAERPD 239 (339)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEESCCHHHHHHHHHHHHHHHHTTCCCGGGEEEECS-CCCHHH-HHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEeCCCCccHHHHHHHHHHHHHHCCCCCCChheEecC-CCCHHH-HHHHHHHHHcCCCC
Confidence 36678889999999999 68899987532 2233 345677899843 32222221 122211 22344454432 12
Q ss_pred CcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 474 VVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 474 ~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
..-+.+..+ + -.+.+.++.|+. |..|-+||=.
T Consensus 240 ~~ai~~~nD~~A~g~~~al~~~G~~vP~disvvgfD 275 (339)
T 3h5o_A 240 CDALFCCNDDLAIGALARSQQLGIAVPERLAIAGFN 275 (339)
T ss_dssp CCEEEESSHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred CcEEEECChHHHHHHHHHHHHcCCCCCCCEEEEEEC
Confidence 222333333 2 367778889987 5678888754
No 191
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=64.23 E-value=26 Score=33.53 Aligned_cols=99 Identities=16% Similarity=0.158 Sum_probs=58.9
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCCch--hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhcc---
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQDH--- 472 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~~--- 472 (559)
..++..++++|.++|| +|.|+++.... ..++. ++.|+++|++.. ++..+ .+.+. -.+.++.++...
T Consensus 116 ~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~-~~~~~---~~~~~-~~~~~~~~l~~~~~~ 190 (295)
T 3hcw_A 116 ILASENLTRHVIEQGVDELIFITEKGNFEVSKDRIQGFETVASQFNLDYQ-IIETS---NEREV-ILNYMQNLHTRLKDP 190 (295)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEESSCCHHHHHHHHHHHHHHHHTTCEEE-EEEEC---SCHHH-HHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHcCCccEEEEcCCccchhHHHHHHHHHHHHHHcCCCee-EEecc---CCHHH-HHHHHHHHHhhcccC
Confidence 5677888999999999 78899987643 23333 455678998765 32221 12222 123344443321
Q ss_pred -CCcEEEEeCCc---cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 473 -GVVIHAAYGSN---KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 473 -~~~i~aafGN~---~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
...-+.+.++. -.+.+.++.|+. |..|-+||=.
T Consensus 191 ~~~~ai~~~~d~~A~g~~~al~~~g~~vP~di~vig~D 228 (295)
T 3hcw_A 191 NIKQAIISLDAMLHLAILSVLYELNIEIPKDVMTATFN 228 (295)
T ss_dssp TSCEEEEESSHHHHHHHHHHHHHTTCCTTTTEEEEEEC
T ss_pred CCCcEEEECChHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 22223333332 367788889987 6788888744
No 192
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=63.74 E-value=42 Score=31.94 Aligned_cols=105 Identities=15% Similarity=0.145 Sum_probs=61.4
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCC-ch--hhH---HHHHHHhhCCCCCcee-EecCCCCCChhhHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRP-DM--QQG---RVLSWLSQHNFPHGLV-SFADGLSPGFLGHKASYLK 466 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp-~~--~~~---~T~~WL~qhglP~G~L-~lr~g~~~dp~~~K~~~L~ 466 (559)
++.| -..++..+.+.|.++|| +|.|+++.+ .. ..+ .-++.|+++|++.... ..... .+++. -...++
T Consensus 113 V~~D--~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~--~~~~~-~~~~~~ 187 (289)
T 2fep_A 113 VAID--YEQAIYDAVKLLVDKGHTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGD--YTYDS-GLEALQ 187 (289)
T ss_dssp EECC--HHHHHHHHHHHHHHTTCSSEEEEESCTTSHHHHTTHHHHHHHHHHHTTCCCCGGGEEECC--SCHHH-HHHHHH
T ss_pred EEEC--cHHHHHHHHHHHHHCCCCeEEEEeCCccccccHHHHHHHHHHHHHHcCCCCChheEeeCC--CCHHH-HHHHHH
Confidence 4555 35677888899999998 788999876 32 222 3456777899876542 22221 22221 223455
Q ss_pred HHhhc-cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcC
Q psy4654 467 SLIQD-HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGK 504 (559)
Q Consensus 467 ~L~~~-~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~ 504 (559)
+++.. ....-+.+..+ + -.+.+.++.|+. |..|-+||=
T Consensus 188 ~~l~~~~~~~ai~~~~d~~A~g~~~al~~~G~~vP~di~vvg~ 230 (289)
T 2fep_A 188 HLMSLDKKPTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGF 230 (289)
T ss_dssp HHTTSSSCCSEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEEE
T ss_pred HHHcCCCCCCEEEECCHHHHHHHHHHHHHcCCCCCCCeEEEEE
Confidence 55432 12323333333 2 466778889986 567777763
No 193
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=63.16 E-value=36 Score=33.45 Aligned_cols=100 Identities=11% Similarity=0.015 Sum_probs=59.8
Q ss_pred cchhHHHHHHHHHHCCC-eEEEEecCCch--hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhccCC
Q psy4654 401 VRAGAVDIVRHWQELGY-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~ 474 (559)
-..++..+.++|.++|| +|.|+++.+.. ..++. ++.|+++|++ .+..... .+.+. -.+.+++++.....
T Consensus 158 ~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~--~~~~~~~--~~~~~-~~~~~~~ll~~~~~ 232 (333)
T 3jvd_A 158 DEAGFFQLTESVLGGSGMNIAALVGEESLSTTQERMRGISHAASIYGAE--VTFHFGH--YSVES-GEEMAQVVFNNGLP 232 (333)
T ss_dssp HHHHHHHHHHHHCCSSSCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCE--EEEEECC--SSHHH-HHHHHHHHHHTCCC
T ss_pred hHHHHHHHHHHHHHCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHCCCC--EEEecCC--CCHHH-HHHHHHHHhcCCCC
Confidence 36778888999999999 78899998543 23333 5566789988 2222121 22322 23345555443222
Q ss_pred cEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 475 VIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 475 ~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
.-+.+..+ + -.+.+.++.|+. |..|-+||=.
T Consensus 233 ~ai~~~nd~~A~g~~~al~~~G~~vP~disvig~D 267 (333)
T 3jvd_A 233 DALIVASPRLMAGVMRAFTRLNVRVPHDVVIGGYD 267 (333)
T ss_dssp SEEEECCHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred cEEEECCHHHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 22233333 2 467788899987 5778777743
No 194
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=62.04 E-value=46 Score=32.41 Aligned_cols=101 Identities=17% Similarity=0.201 Sum_probs=59.9
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCCc--hhhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhccCCc
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRPD--MQQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp~--~~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
..++..+.++|.++|| +|.|+++.+. ...++. ++.|+++|++..+.....+ ..+.+. =.+.+++++.. ...
T Consensus 165 ~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~-~~~~~~-~~~~~~~ll~~-~~~ 241 (332)
T 2o20_A 165 HLAAYQSTKKLIDSGNKKIAYIMGSLKDVENTERMVGYQEALLEANIEFDENLVFEG-NYSYEQ-GKALAERLLER-GAT 241 (332)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECSCTTSHHHHHHHHHHHHHHHHTTCCCCGGGEECS-CCSHHH-HHHHHHHHHHT-TCC
T ss_pred HHHHHHHHHHHHHCCCCeEEEEeCCcccccHHHHHHHHHHHHHHcCCCCChhhEEeC-CCCHHH-HHHHHHHHhcc-CCC
Confidence 5677888899999998 6889998753 223333 4567789987654322221 122221 12345555443 333
Q ss_pred EEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 476 IHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 476 i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
-+.+..+ + -.+.+.++.|+. |..|-+||-.
T Consensus 242 ai~~~~d~~A~g~~~al~~~G~~vP~disvig~D 275 (332)
T 2o20_A 242 SAVVSHDTVAVGLLSAMMDKGVKVPEDFEIISGA 275 (332)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCCTTTTCEEEESS
T ss_pred EEEECChHHHHHHHHHHHHcCCCCccCEEEEEeC
Confidence 2333333 2 356778889987 6788888854
No 195
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=62.04 E-value=20 Score=33.68 Aligned_cols=103 Identities=12% Similarity=-0.014 Sum_probs=57.0
Q ss_pred ccCCCcccchhHHHHHHHHHHCCC-eEEEEecCCch--hhHH---HHHHHhhCCCCCceeEecCCCCCChhhHHHHHHHH
Q psy4654 394 VTGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPDM--QQGR---VLSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKS 467 (559)
Q Consensus 394 ~~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~---T~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~ 467 (559)
.++.| -..++..+.+++.++|| +|.|+++.+.. ..++ -++.|+++|++...+ ..... .....++. |..
T Consensus 101 ~V~~D--~~~~g~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~-~~~~~-~~~~~~~~--l~~ 174 (277)
T 3e61_A 101 GISTN--HFKGGQLQAEVVRKGKGKNVLIVHENLLIDAFHQRVQGIKYILDQQRIDYKML-EATLL-DNDKKFID--LIK 174 (277)
T ss_dssp -------HHHHHHHHHHHHHHTTCCSEEEEESCTTSHHHHHHHHHHHHHHHC---CEEEE-EGGGG-GSHHHHHH--HHH
T ss_pred eEEec--hHHHHHHHHHHHHHCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHcCCCccce-ecCCC-CHHHHHHH--hhc
Confidence 34555 35677888999999999 79999987653 2233 356677889887763 32211 11112333 332
Q ss_pred HhhccCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 468 LIQDHGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 468 L~~~~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
- ....-+.+..+ + -.+.+.++.|+. |..|-+||-.
T Consensus 175 ~---~~~~ai~~~~d~~a~g~~~al~~~g~~vP~di~vig~d 213 (277)
T 3e61_A 175 E---LSIDSIICSNDLLAINVLGIVQRYHFKVPAEIQIIGYD 213 (277)
T ss_dssp H---HTCCEEEESSHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred C---CCCCEEEECCcHHHHHHHHHHHHcCCCCCCceEEEeeC
Confidence 1 23333333333 2 467888899987 6788888854
No 196
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=61.01 E-value=33 Score=31.85 Aligned_cols=105 Identities=12% Similarity=-0.035 Sum_probs=60.9
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCch--hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSL 468 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L 468 (559)
++.| ...++..++++|.++|| +|.|+++.+.. ..++. ++.|+++|++...+... ..+++.-. +.++++
T Consensus 100 V~~d--~~~~~~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~---~~~~~~~~-~~~~~~ 173 (272)
T 3o74_A 100 VISD--DRDASRQLAASLLSSAPRSIALIGARPELSVSQARAGGFDEALQGYTGEVRRYQGE---AFSRECGQ-RLMQQL 173 (272)
T ss_dssp EEEC--HHHHHHHHHHHHHTTCCSEEEEEEECTTSHHHHHHHHHHHHHTTTCCSEEEEEEES---SSSHHHHH-HHHHHH
T ss_pred EEEc--hHHHHHHHHHHHHHCCCcEEEEEecCCCCccHHHHHHHHHHHHHHcCCChheeecC---CCCHHHHH-HHHHHH
Confidence 4445 35677888999999998 79999987643 33343 44556788764333222 12232222 233444
Q ss_pred hhc-c-CCcEEEEeCC--c-cchhHHHhcCCCCCcEEEEcCC
Q psy4654 469 IQD-H-GVVIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 469 ~~~-~-~~~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~~ 505 (559)
+.. . ...-+.+..+ + -.+.+.++.|+-|..|-+||=.
T Consensus 174 l~~~~~~~~ai~~~~d~~a~g~~~al~~~g~vp~di~vvg~d 215 (272)
T 3o74_A 174 IDDLGGLPDALVTTSYVLLQGVFDTLQARPVDSRQLQLGTFG 215 (272)
T ss_dssp HHHHTSCCSEEEESSHHHHHHHHHHHHTSCGGGCCCEEEEES
T ss_pred HhcCCCCCcEEEEeCchHHHHHHHHHHHcCCCccceEEEEeC
Confidence 332 2 2333333444 2 4678888999756778777744
No 197
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=60.96 E-value=45 Score=31.70 Aligned_cols=107 Identities=16% Similarity=0.096 Sum_probs=61.9
Q ss_pred cCCCcccchhHHHHHHHHHHC--CC-eEEEEecCCch-hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQEL--GY-LIIYITGRPDM-QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKS 467 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~--GY-~IIYLTaRp~~-~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~ 467 (559)
++.|. ..+...+.+++.++ |+ +|.|+++.... ..++. ++.|++++++...+....+ ..+++.-. +.+++
T Consensus 105 V~~d~--~~~g~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~ 180 (305)
T 3g1w_A 105 LGTNN--YNAGMNAAYKMAELLDGEGEVAVITLPNQLNHQERTTGFKETLEAEFPAIEVIAVEDG-RGDSLHSR-RVAHQ 180 (305)
T ss_dssp EECCH--HHHHHHHHHHHHHHTTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHCTTEEEEEEEEC-TTCHHHHH-HHHHH
T ss_pred ECcCH--HHHHHHHHHHHHHHhCCCcEEEEEeCCCcccHHHHHHHHHHHHHhhCCCCEEEEEecC-CCCHHHHH-HHHHH
Confidence 55553 56778888899888 98 68899886432 22333 4556678877666544322 22332222 23444
Q ss_pred Hhhc-cCCcEEEEeCC--c-cchhHHHhcCCCCCcEEEEcCCC
Q psy4654 468 LIQD-HGVVIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGKVS 506 (559)
Q Consensus 468 L~~~-~~~~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~~~ 506 (559)
++.. .+...+.+..+ + -.+.+.++.|+. ..|.+||-.+
T Consensus 181 ~l~~~~~~~ai~~~~d~~a~g~~~al~~~g~~-~di~vig~d~ 222 (305)
T 3g1w_A 181 LLEDYPNLAGIFATEANGGVGVGDAVRLESRA-GEIQIISFDT 222 (305)
T ss_dssp HHHHCTTEEEEEESSHHHHHHHHHHHHHTTCT-TTSEEEEESC
T ss_pred HHHhCCCceEEEECCCcchhhHHHHHHhcCCC-CCeEEEEeCC
Confidence 4332 22333333333 2 467888899998 7777777543
No 198
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=60.76 E-value=21 Score=33.66 Aligned_cols=109 Identities=16% Similarity=0.119 Sum_probs=62.0
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCch-hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHh
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPDM-QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLI 469 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~~-~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~ 469 (559)
++.| ...++..++++|.++|| +|.++++.... ..++. ++.|+++|++............+....=.+.+++++
T Consensus 117 V~~d--~~~~~~~a~~~L~~~G~~~i~~i~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 194 (298)
T 3tb6_A 117 FTLD--DVKGGMMAAEHLLSLGHTHMMGIFKADDTQGVKRMNGFIQAHRERELFPSPDMIVTFTTEEKESKLLEKVKATL 194 (298)
T ss_dssp EEEC--HHHHHHHHHHHHHHTTCCSEEEEEESSSHHHHHHHHHHHHHHHHTTCCCCGGGEEEECHHHHTTHHHHHHHHHH
T ss_pred EEeC--cHHHHHHHHHHHHHCCCCcEEEEcCCCCccHHHHHHHHHHHHHHcCCCCCcceEEEecccchhhhHHHHHHHHH
Confidence 4445 36677888999999999 68899886652 22333 455678898866533221101111010033455544
Q ss_pred hcc-C--CcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 470 QDH-G--VVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 470 ~~~-~--~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
... . ..-+.+..+ + -.+.+.++.|+. |..|-+||-.
T Consensus 195 ~~~~~~~~~ai~~~~d~~a~g~~~al~~~g~~vP~di~vvg~d 237 (298)
T 3tb6_A 195 EKNSKHMPTAILCYNDEIALKVIDMLREMDLKVPEDMSIVGYD 237 (298)
T ss_dssp HHTTTSCCSEEECSSHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred hcCCCCCCeEEEEeCcHHHHHHHHHHHHcCCCCCCceEEEecC
Confidence 322 2 333333333 2 467788899987 6788888754
No 199
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=60.18 E-value=32 Score=32.98 Aligned_cols=103 Identities=15% Similarity=0.182 Sum_probs=59.9
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCch--hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSL 468 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L 468 (559)
++.| -..++..+.++|.++|| +|.|+++.... ..++. ++.|+++|++...+ .... .+ . -.+.++++
T Consensus 124 V~~D--~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g~~~~~~-~~~~--~~--~-~~~~~~~~ 195 (305)
T 3huu_A 124 IDND--NIDAAYQLTQYLYHLGHRHILFLQESGHYAVTEDRSVGFKQYCDDVKISNDCV-VIKS--MN--D-LRDFIKQY 195 (305)
T ss_dssp EECC--HHHHHHHHHHHHHHTTCCSEEEEEESSCBHHHHHHHHHHHHHHHHTTCCCCEE-EECS--HH--H-HHHHC---
T ss_pred EEeC--HHHHHHHHHHHHHHCCCCeEEEEcCCcccchhHHHHHHHHHHHHHcCCCcccE-EecC--cH--H-HHHHHHHh
Confidence 4555 36678888999999999 79999987653 22333 56677899987773 3221 11 1 22233444
Q ss_pred -hhc-cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 469 -IQD-HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 469 -~~~-~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
+.. ....-+.+..+ + -.+.+.++.|+. |..|-+||=.
T Consensus 196 ~l~~~~~~~ai~~~nd~~A~g~~~al~~~g~~vP~di~vig~D 238 (305)
T 3huu_A 196 CIDASHMPSVIITSDVMLNMQLLNVLYEYQLRIPEDIQTATFN 238 (305)
T ss_dssp -----CCCSEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEEES
T ss_pred hhcCCCCCCEEEECChHHHHHHHHHHHHcCCCCCcceEEEEEC
Confidence 331 12222233333 2 467788889987 5678777744
No 200
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=57.52 E-value=9 Score=41.97 Aligned_cols=91 Identities=15% Similarity=0.094 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhccCCcEEEEeCC
Q psy4654 403 AGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQDHGVVIHAAYGS 482 (559)
Q Consensus 403 ~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~~i~aafGN 482 (559)
.|++++.+.|.+.||+|+ -| .-|.++|+++|+|...|.=. ..=||..- .-+|.|-+...-=|.+.-+|
T Consensus 35 ~glv~~Ak~L~~lGfeI~-AT-------gGTak~L~e~GI~v~~V~kv---TgfPEil~-GRVKTLHP~IhgGiLa~r~~ 102 (534)
T 4ehi_A 35 EGIVEFGKELENLGFEIL-ST-------GGTFKLLKENGIKVIEVSDF---TKSPELFE-GRVKTLHPKIHGGILHKRSD 102 (534)
T ss_dssp TTHHHHHHHHHHTTCEEE-EC-------HHHHHHHHHTTCCCEECBCC---C----------------------------
T ss_pred ccHHHHHHHHHHCCCEEE-Ec-------cHHHHHHHHCCCceeehhhc---cCCchhhC-CccccCChhhhhhhccCCCC
Confidence 579999999999999987 44 36999999999997655421 11111100 01233322222235555667
Q ss_pred ccchhHHHhcCCCCCcEEEEcCC
Q psy4654 483 NKDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 483 ~~DV~aYr~vGI~~~~If~i~~~ 505 (559)
..+++..+..||++-.+.+||=.
T Consensus 103 ~~h~~~l~~~~I~~iDlVvvNLY 125 (534)
T 4ehi_A 103 ENHIKQAKENEILGIDLVCVNLY 125 (534)
T ss_dssp -----------CEEESEEEEECC
T ss_pred HHHHHHHHHcCCCceeEEEEeCc
Confidence 77888888899999999999843
No 201
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=56.54 E-value=66 Score=30.15 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=56.3
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCCch--hhHH---HHHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhc-cCC
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRPDM--QQGR---VLSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQD-HGV 474 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~---T~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~-~~~ 474 (559)
..++..+.+++.++|+ +|.|+++.+.. ..++ -++.|+++|++........+ ..+++.- ...+++++.. ...
T Consensus 111 ~~~~~~~~~~L~~~G~~~i~~i~~~~~~~~~~~R~~g~~~~l~~~g~~~~~~~~~~~-~~~~~~~-~~~~~~~l~~~~~~ 188 (289)
T 1dbq_A 111 FEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQG-DFEPESG-YRAMQQILSQPHRP 188 (289)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECCC------CHHHHHHHHHHHHTTCCCCGGGBCCC-CSSHHHH-HHHHHHHHTSSSCC
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCCccccHHHHHHHHHHHHHHCCCCCChHHeEeC-CCCHHHH-HHHHHHHHhCCCCC
Confidence 5667788888989998 78899887532 2333 35566788987654322221 1122221 2344555432 233
Q ss_pred cEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcC
Q psy4654 475 VIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGK 504 (559)
Q Consensus 475 ~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~ 504 (559)
.-+.+..+ + -.+.+.++.|+. |..|-+||-
T Consensus 189 ~ai~~~~d~~a~g~~~al~~~G~~vP~di~vvg~ 222 (289)
T 1dbq_A 189 TAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGY 222 (289)
T ss_dssp SEEEESCHHHHHHHHHHHHHTTCCTTTTCEEEEE
T ss_pred CEEEECCcHHHHHHHHHHHHcCCCCCCceEEEee
Confidence 33333443 2 466778889987 466666663
No 202
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=56.00 E-value=89 Score=29.55 Aligned_cols=105 Identities=15% Similarity=0.157 Sum_probs=60.4
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCc--hhhHHH---HHHHhhCCCCCcee-EecCCCCCChhhHHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPD--MQQGRV---LSWLSQHNFPHGLV-SFADGLSPGFLGHKASYLKS 467 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~--~~~~~T---~~WL~qhglP~G~L-~lr~g~~~dp~~~K~~~L~~ 467 (559)
++.| -..++..+.+.+.++|| +|.|+++.+. ...++. ++.|+++|++.... .... ..+++. -.+.+++
T Consensus 108 V~~D--~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~--~~~~~~-~~~~~~~ 182 (290)
T 2rgy_A 108 FCPD--HRRGGELAAATLIEHGHRKLAVISGPFTASDNVERLDGFFDELARHGIARDSVPLIES--DFSPEG-GYAATCQ 182 (290)
T ss_dssp ECCC--HHHHHHHHHHHHHHTTCCSEEEEESCTTCHHHHHHHHHHHHHHHTTTCCGGGSCEEEC--CSSHHH-HHHHHHH
T ss_pred EEeC--cHHHHHHHHHHHHHCCCceEEEEeCCCCCccHHHHHHHHHHHHHHcCCCCCcccEEec--CCChhH-HHHHHHH
Confidence 5556 35677888899999999 6889998754 223333 45667889876543 2222 122221 1233444
Q ss_pred Hhhc-cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcC
Q psy4654 468 LIQD-HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGK 504 (559)
Q Consensus 468 L~~~-~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~ 504 (559)
++.. ....-+.+..+ + -.+.+.++.|+. |..|-+||=
T Consensus 183 ~l~~~~~~~ai~~~~d~~A~g~~~al~~~G~~vP~di~vvg~ 224 (290)
T 2rgy_A 183 LLESKAPFTGLFCANDTMAVSALARFQQLGISVPGDVSVIGY 224 (290)
T ss_dssp HHHHTCCCSEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEEE
T ss_pred HHhCCCCCcEEEECCcHHHHHHHHHHHHcCCCCCCceEEEEe
Confidence 4432 22322333333 2 466778889986 467777763
No 203
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=55.43 E-value=27 Score=33.10 Aligned_cols=97 Identities=10% Similarity=0.006 Sum_probs=59.3
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCCch--hhHH---HHHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhc-cCC
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRPDM--QQGR---VLSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQD-HGV 474 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~---T~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~-~~~ 474 (559)
..+...+.++|. +|| +|.|+++.+.. ..++ -++.|+++|++.... ...+ +.. .+.+++++.. ...
T Consensus 108 ~~~g~~a~~~L~-~G~~~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g~~~~~~-~~~~---~~~---~~~~~~~l~~~~~~ 179 (277)
T 3hs3_A 108 TKGGKESIKLLS-KKIEKVLIQHWPLSLPTIRERIEAMTAEASKLKIDYLLE-ETPE---NNP---YISAQSALNKSNQF 179 (277)
T ss_dssp HHHHHHHHHTSC-TTCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEE-ECCS---SCH---HHHHHHHHHTGGGC
T ss_pred HHHHHHHHHHHH-hCCCEEEEEeCCCcCccHHHHHHHHHHHHHHCCCCCCCC-CccC---Cch---HHHHHHHHcCCCCC
Confidence 566778888888 998 78899988643 2233 345677899887664 3322 111 4455555432 222
Q ss_pred cEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCCC
Q psy4654 475 VIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKVS 506 (559)
Q Consensus 475 ~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~~ 506 (559)
.-+.+..+ + -.+.+.++.|+. |..|-+||=.+
T Consensus 180 ~ai~~~~d~~A~g~~~al~~~g~~vP~di~vig~d~ 215 (277)
T 3hs3_A 180 DAIITVNDLYAAEIIKEAKRRNLKIPDDFQLVGYDN 215 (277)
T ss_dssp SEEECSSHHHHHHHHHHHHHTTCCTTTTCEEECSBC
T ss_pred CEEEECCHHHHHHHHHHHHHcCCCCCCceEEEeeCC
Confidence 22233333 2 356788889987 67888888543
No 204
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=54.65 E-value=41 Score=33.13 Aligned_cols=95 Identities=9% Similarity=-0.050 Sum_probs=57.3
Q ss_pred HHHHHHCCC--eEEEEecCCch-hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhccCCcEEEEeCC
Q psy4654 409 VRHWQELGY--LIIYITGRPDM-QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQDHGVVIHAAYGS 482 (559)
Q Consensus 409 v~~l~~~GY--~IIYLTaRp~~-~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~~i~aafGN 482 (559)
..++.+.|| +|-||+|.+.. ..++. ++-++++|.+........+...+|+.-+. ..+.|++ .+.....+..+
T Consensus 120 a~~l~~~Gh~r~Ig~i~g~~~~~~~~r~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~a~~ll~-~~~daI~~~~d 197 (318)
T 2fqx_A 120 AALKAKEAGKSAVGFIVGMELGMMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQA-LAAKLYD-SGVNVIFQVAG 197 (318)
T ss_dssp HHHHHHHTTCCEEEEEESCCSTTTHHHHHHHHHHHHHHCTTCEEEEEECSCSSCHHHHHH-HHHHHHH-TTCCEEEEECG
T ss_pred HHHHhccCCCcEEEEEeCcccHHHHHHHHHHHHHHHHHCCCCEEEEEEccCccCHHHHHH-HHHHHHH-CCCcEEEECCC
Confidence 577888898 99999987532 22233 34556678765544332233345544443 3444443 24444445544
Q ss_pred -c--cchhHHHhcCCCCCcEEEEcCC
Q psy4654 483 -N--KDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 483 -~--~DV~aYr~vGI~~~~If~i~~~ 505 (559)
. -.+.+.++.|+.|..|++||=.
T Consensus 198 ~~a~Gv~~a~~e~g~~P~dv~viG~D 223 (318)
T 2fqx_A 198 GTGNGVIKEARDRRLNGQDVWVIGVD 223 (318)
T ss_dssp GGHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CCchHHHHHHHhhhhccCCcEEEEEe
Confidence 2 4677888889888889999844
No 205
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=54.48 E-value=85 Score=29.32 Aligned_cols=106 Identities=18% Similarity=0.193 Sum_probs=60.0
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCc--hhhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPD--MQQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSL 468 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~--~~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L 468 (559)
++.|. ..++..+.+++.++|| +|.|+++.+. ...++. ++.|+++|++........+ ..+++.- .+.++++
T Consensus 119 V~~d~--~~~~~~a~~~l~~~G~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~-~~~~~~~-~~~~~~~ 194 (296)
T 3brq_A 119 VWCDH--KQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIANG-KWTPASG-AEGVEML 194 (296)
T ss_dssp ECCCH--HHHHHHHHHHHHHTTCCSEEEECCCTTCHHHHHHHHHHHHHHHTTTCCCCGGGEECC-CSSHHHH-HHHHHHH
T ss_pred EEEch--HHHHHHHHHHHHHCCCceEEEEcCCCCCccHHHHHHHHHHHHHHcCCCCChhhEEeC-CCChhHH-HHHHHHH
Confidence 45553 5667778888888998 6889998753 223333 4566788987654322221 1222221 2334555
Q ss_pred hhc-cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcC
Q psy4654 469 IQD-HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGK 504 (559)
Q Consensus 469 ~~~-~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~ 504 (559)
+.. ....-+.+.++ + -.+.+.++.|+. |..|-+||-
T Consensus 195 l~~~~~~~ai~~~~d~~a~g~~~al~~~g~~vP~di~vvg~ 235 (296)
T 3brq_A 195 LERGAKFSALVASNDDMAIGAMKALHERGVAVPEQVSVIGF 235 (296)
T ss_dssp HTC--CCSEEEESSHHHHHHHHHHHHHHTCCTTTTCEEEEE
T ss_pred HhCCCCCCEEEECChHHHHHHHHHHHHcCCCCCCceEEEee
Confidence 432 23333334444 2 456777888986 567777763
No 206
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=54.45 E-value=73 Score=31.32 Aligned_cols=100 Identities=16% Similarity=0.110 Sum_probs=58.4
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCCch--hhHH---HHHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhc-cCC
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRPDM--QQGR---VLSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQD-HGV 474 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~---T~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~-~~~ 474 (559)
..++....++|.++|| +|.|+++.... ..++ -++.|+++|++...+...+ .+.+. -.+.+++++.. ...
T Consensus 164 ~~~~~~a~~~L~~~G~~~I~~i~g~~~~~~~~~R~~Gf~~al~~~gi~~~~~~~~~---~~~~~-~~~~~~~ll~~~~~~ 239 (349)
T 1jye_A 164 EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGD---WSAMS-GFQQTMQMLNEGIVP 239 (349)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHHHHHHHHHTTCCCSEEEECC---SSHHH-HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHHHcCCCccccccCC---CChHH-HHHHHHHHHhCCCCC
Confidence 4567778888888898 68999987542 2333 3566778998754433221 12211 12334444432 122
Q ss_pred cEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 475 VIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 475 ~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
.-+.+..+ + -.+.+.++.|+. |..|-+||=.
T Consensus 240 ~ai~~~nD~~A~g~~~al~~~G~~vP~disvvGfD 274 (349)
T 1jye_A 240 TAMLVANDQMALGAMRAITESGLRVGADISVVGYD 274 (349)
T ss_dssp SEEEESSHHHHHHHHHHHHHTTCCBTTTBEEECSB
T ss_pred CEEEECChHHHHHHHHHHHHcCCCCCCcEEEEEEC
Confidence 22333333 2 356778889987 5788888854
No 207
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=54.08 E-value=45 Score=32.46 Aligned_cols=101 Identities=14% Similarity=0.142 Sum_probs=59.1
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCC-ch--hh---HHHHHHHhhCCCCCcee-EecCCCCCChhhHHHHHHHHHhhcc-
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRP-DM--QQ---GRVLSWLSQHNFPHGLV-SFADGLSPGFLGHKASYLKSLIQDH- 472 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp-~~--~~---~~T~~WL~qhglP~G~L-~lr~g~~~dp~~~K~~~L~~L~~~~- 472 (559)
..++..+.++|.++|| +|.|+++.+ .. .. +.-++.|+++|++..+. ..... .+++. =.+.+++++...
T Consensus 162 ~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~--~~~~~-~~~~~~~ll~~~~ 238 (332)
T 2hsg_A 162 EQAAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTESGLPVRDSYIVEGD--YTYDS-GIEAVEKLLEEDE 238 (332)
T ss_dssp HHHHHHHHHHHHTTTCSCEEEEESCTTSHHHHTTHHHHHHHHHHTTTCCCCGGGEEECC--SSHHH-HHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCCcccCccHHHHHHHHHHHHHHcCCCCChheEEeCC--CCHHH-HHHHHHHHHcCCC
Confidence 5677888899999999 788999876 32 22 23456677899876542 22221 22221 123455554421
Q ss_pred CCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 473 GVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 473 ~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
...-+.+..+ + -.+.+.++.|+. |..|-+||=.
T Consensus 239 ~~~ai~~~nd~~A~g~~~al~~~G~~vP~disvvg~D 275 (332)
T 2hsg_A 239 KPTAIFVGTDEMALGVIHGAQDRGLNVPNDLEIIGFD 275 (332)
T ss_dssp CCSEEEESSHHHHHHHHHHHHHTTCCHHHHCEEEEES
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCCCCCCeEEEEEC
Confidence 2222333333 2 366778889997 5677777643
No 208
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=53.72 E-value=63 Score=30.41 Aligned_cols=105 Identities=11% Similarity=0.100 Sum_probs=59.5
Q ss_pred cCCCcccchhHHHHHHHHHHCCC---eEEEEe----cCCc--hhhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY---LIIYIT----GRPD--MQQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKA 462 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY---~IIYLT----aRp~--~~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~ 462 (559)
++.| -..+...+.+.+.++|| +|.|++ +.+. ...++. ++.|+++|++...+....+ ..+++.- .
T Consensus 113 V~~D--~~~~g~~a~~~l~~~g~~~~~i~~i~~~~~g~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~-~~~~~~~-~ 188 (304)
T 3gbv_A 113 FGQN--SHQSGYFAARMLMLLAVNDREIVIFRKIHEGVIGSNQQESREIGFRQYMQEHHPACNILELNLH-ADLNIED-S 188 (304)
T ss_dssp EECC--HHHHHHHHHHHHHHHSTTCSEEEEEEEEBTTBCCCHHHHHHHHHHHHHHHHHCTTSEEEEEEEE-SSCSSCH-H
T ss_pred EecC--hHHHHHHHHHHHHHHhCCCCeEEEEEecccCCccchhHHHHHHHHHHHHHhhCCCcEEEEeeec-CCCHHHH-H
Confidence 4555 35677888899999888 899999 4332 233343 4566788888766544221 1111112 2
Q ss_pred HHHHHHhhc-cCCcEEEEeCC-c-cchhHHHhcCCCCCcEEEEcCC
Q psy4654 463 SYLKSLIQD-HGVVIHAAYGS-N-KDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 463 ~~L~~L~~~-~~~~i~aafGN-~-~DV~aYr~vGI~~~~If~i~~~ 505 (559)
+.+++++.. ....-+.+..+ + -.+.+.++.|+ ..|.+||=.
T Consensus 189 ~~~~~~l~~~~~~~ai~~~~d~a~g~~~al~~~g~--~di~vig~d 232 (304)
T 3gbv_A 189 RMLDDFFREHPDVKHGITFNSKVYIIGEYLQQRRK--SDFSLIGYD 232 (304)
T ss_dssp HHHHHHHHHCTTCCEEEESSSCTHHHHHHHHHTTC--CSCEEEEES
T ss_pred HHHHHHHHhCCCeEEEEEcCcchHHHHHHHHHcCC--CCcEEEEeC
Confidence 334444332 13333333333 3 46677888999 677777644
No 209
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=50.84 E-value=78 Score=30.94 Aligned_cols=106 Identities=10% Similarity=-0.010 Sum_probs=57.1
Q ss_pred cCCCcccchhHHHHHHHHHHCC------C--eEEEEecCCch--hhHH---HHHHHhhCCCCCceeEecCCCCCChhhHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELG------Y--LIIYITGRPDM--QQGR---VLSWLSQHNFPHGLVSFADGLSPGFLGHK 461 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~G------Y--~IIYLTaRp~~--~~~~---T~~WL~qhglP~G~L~lr~g~~~dp~~~K 461 (559)
++.|. ..+...+.+.+.++| + +|.++++.+.. ..++ -++.|+++++..-...... ..+++.-.
T Consensus 118 V~~D~--~~~g~~a~~~L~~~g~~~~~g~~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~~~~~~~~~~~~--~~~~~~~~ 193 (350)
T 3h75_A 118 MVGDD--EEAGYRMLKELLHKLGPVPAGHGIELLAFSGLKVTPAAQLRERGLRRALAEHPQVHLRQLVYG--EWNRERAY 193 (350)
T ss_dssp EECCH--HHHHHHHHHHHHHHHCCCCSSCCEEEEEEESCTTSHHHHHHHHHHHHHHHHCTTEEEEEEEEC--TTCHHHHH
T ss_pred ecCCh--HHHHHHHHHHHHHHhhhhcCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeC--CCcHHHHH
Confidence 44553 455667777887777 5 89999987643 2333 3566777876222122222 12232222
Q ss_pred HHHHHHHhhc-cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 462 ASYLKSLIQD-HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 462 ~~~L~~L~~~-~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
. .+++++.. ..+.-+.+..+ + -.+.+.++.|+. |..|.+||=.
T Consensus 194 ~-~~~~~L~~~~~~~aI~~~~d~~a~g~~~al~~~G~~vP~di~vvg~d 241 (350)
T 3h75_A 194 R-QAQQLLKRYPKTQLVWSANDEMALGAMQAARELGRKPGTDLLFSGVN 241 (350)
T ss_dssp H-HHHHHHHHCTTEEEEEESSHHHHHHHHHHHHHTTCCBTTTBEEEEES
T ss_pred H-HHHHHHHhCCCcCEEEECChHHHHHHHHHHHHcCCCCCCCeEEEecC
Confidence 2 33444332 22322333333 2 467788889987 4567777643
No 210
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=50.43 E-value=80 Score=29.78 Aligned_cols=105 Identities=12% Similarity=0.029 Sum_probs=59.9
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCch--hhHHH---HHHHhhCCCCCcee-EecCCCCCChhhHHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLV-SFADGLSPGFLGHKASYLKS 467 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L-~lr~g~~~dp~~~K~~~L~~ 467 (559)
++.| -..++..+.+.+.++|+ +|.|+++.+.. ..++. ++.|+++|++.... .... ..+++. -.+.+++
T Consensus 105 V~~D--~~~~g~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~--~~~~~~-~~~~~~~ 179 (290)
T 3clk_A 105 ISSD--DEDIGYQATNLLINEGHRQIGIAGIDQYPYTGRKRLAGYKKALKEANIAINQEWIKPG--DYSYTS-GEQAMKA 179 (290)
T ss_dssp EECC--HHHHHHHHHHHHHTTTCCSEEEESCCCCTTTHHHHHHHHHHHHHHTTCCCCGGGEECC--CSSHHH-HHHHHHH
T ss_pred EEeC--hHHHHHHHHHHHHHcCCCEEEEEeCCCCCcchHHHHHHHHHHHHHcCCCCCcceEEcC--CCChhh-HHHHHHH
Confidence 3445 35667788899999999 78899987542 23333 45667889876542 2222 122221 1234555
Q ss_pred HhhccCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcC
Q psy4654 468 LIQDHGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGK 504 (559)
Q Consensus 468 L~~~~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~ 504 (559)
++...+..-+.+..+ + -.+.+.++.|+. |..|-+||=
T Consensus 180 ~l~~~~~~ai~~~~d~~a~g~~~al~~~g~~vP~di~vvg~ 220 (290)
T 3clk_A 180 FGKNTDLTGIIAASDMTAIGILNQASSFGIEVPKDLSIVSI 220 (290)
T ss_dssp HCTTCCCSEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEEE
T ss_pred HhccCCCcEEEECCcHHHHHHHHHHHHcCCCCCCceEEEEe
Confidence 543112333333444 2 466778889986 466766663
No 211
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=49.21 E-value=58 Score=30.69 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=26.4
Q ss_pred HHHHHHHHHhhccCCc--EEEEeCC-ccchhHHHhcCC
Q psy4654 460 HKASYLKSLIQDHGVV--IHAAYGS-NKDVSVYTSVGL 494 (559)
Q Consensus 460 ~K~~~L~~L~~~~~~~--i~aafGN-~~DV~aYr~vGI 494 (559)
-|...|+.+++..++. =..+||| .+|+.+.+.+|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~ 234 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGM 234 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCc
Confidence 5777777776544543 3788999 799999999994
No 212
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=48.37 E-value=1.1e+02 Score=28.90 Aligned_cols=105 Identities=20% Similarity=0.126 Sum_probs=61.1
Q ss_pred cCCCcccchhHHHHHHHHHHCCC-eEEEEecCCc--hhhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHH-
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY-LIIYITGRPD--MQQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKS- 467 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY-~IIYLTaRp~--~~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~- 467 (559)
++.| -..++..+.+++.++|+ +|.|+++.+. ...++. ++.|+++|++.. ++..+ .. ++. -.+.+++
T Consensus 104 V~~D--~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~-~~~~~-~~--~~~-~~~~~~~~ 176 (285)
T 3c3k_A 104 VSID--DVAASEYVVDQLVKSGKKRIALINHDLAYQYAQHRESGYLNRLKFHGLDYS-RISYA-EN--LDY-MAGKLATF 176 (285)
T ss_dssp EECC--HHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHHHHHHTCCCC-EEEEC-SS--SSH-HHHHHHHH
T ss_pred EEEC--hHHHHHHHHHHHHHcCCCeEEEEeCCCccccHHHHHHHHHHHHHHcCCCce-EeecC-CC--hHH-HHHHHHHH
Confidence 4455 35667788899999998 6889998754 233333 456678888765 33222 11 111 1234455
Q ss_pred -Hhhc-cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCCC
Q psy4654 468 -LIQD-HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKVS 506 (559)
Q Consensus 468 -L~~~-~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~~ 506 (559)
++.. ....-+.+..+ + -.+.+.++.|+. |..|-+||=.+
T Consensus 177 ~~l~~~~~~~ai~~~~d~~A~g~~~al~~~g~~vP~di~vvg~d~ 221 (285)
T 3c3k_A 177 SLLKSAVKPDAIFAISDVLAAGAIQALTESGLSIPQDVAVVGFDG 221 (285)
T ss_dssp HHHSSSSCCSEEEESSHHHHHHHHHHHHHTTCCTTTTCEEECSBC
T ss_pred HHHcCCCCCeEEEECCHHHHHHHHHHHHHcCCCCCCceEEEEeCC
Confidence 5432 12333333333 2 356777889986 57888887543
No 213
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=47.41 E-value=1.3e+02 Score=29.43 Aligned_cols=100 Identities=14% Similarity=0.074 Sum_probs=57.7
Q ss_pred cchhHHHHHHHHHHCCC-eEEEEecCCch--hhHH---HHHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhccCC
Q psy4654 401 VRAGAVDIVRHWQELGY-LIIYITGRPDM--QQGR---VLSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 401 ~~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~---T~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~ 474 (559)
-..++..+.++|.++|| +|.|+++.+.. ..++ -++.|+++|+... ++... ..+.+. =.+.+++++.....
T Consensus 168 ~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~-~v~~~--~~~~~~-~~~~~~~ll~~~~~ 243 (348)
T 3bil_A 168 PQPGIAAAVELLAHNNALPIGYLSGPMDTSTGRERLEDFKAACANSKIGEQ-LVFLG--GYEQSV-GFEGATKLLDQGAK 243 (348)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEECCCTTSHHHHHHHHHHHHHHHHTTCCCC-EEECC--CSSHHH-HHHHHHHHHHTTCS
T ss_pred hHHHHHHHHHHHHHCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHcCcCcc-EEEcC--CCCHHH-HHHHHHHHHcCCCC
Confidence 35677888899999999 68899987542 2333 3456778888332 23322 122222 12345555443222
Q ss_pred cEEEEeCCc---cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 475 VIHAAYGSN---KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 475 ~i~aafGN~---~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
-+.+..+. -.+.+.++.|+. |..|-+||=.
T Consensus 244 -ai~~~nD~~A~g~~~al~~~G~~vP~disvvG~D 277 (348)
T 3bil_A 244 -TLFAGDSMMTIGVIEACHKAGLVIGKDVSVIGFD 277 (348)
T ss_dssp -EEEESSHHHHHHHHHHHHHTTCCBTTTBEEEEES
T ss_pred -EEEEcChHHHHHHHHHHHHcCCCCCCCeEEEEeC
Confidence 22233332 356778889986 5678887743
No 214
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=46.98 E-value=91 Score=29.43 Aligned_cols=100 Identities=12% Similarity=0.029 Sum_probs=57.1
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCCch--hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhcc-CC
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQDH-GV 474 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~~-~~ 474 (559)
..++..+.++|.++|| +|.|+++.+.. ..++. ++.|+++|++ ..+.... ..+++. -.+.+++++... ..
T Consensus 123 ~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g~~-~~~~~~~--~~~~~~-~~~~~~~~l~~~~~~ 198 (293)
T 2iks_A 123 QDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPRE-VHFLYAN--SYEREA-AAQLFEKWLETHPMP 198 (293)
T ss_dssp HHHHHHHHHHHHTSCCSSEEEEEECTTSHHHHHHHHHHHHHHTTCCCC-EEEEEES--SSCHHH-HHHHHHHHTTTSCCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEecCcccccHHHHHHHHHHHHHHcCCC-ccEEEcC--CCChhh-HHHHHHHHHhcCCCC
Confidence 5677788899999998 78899987542 23333 4566778873 2222222 122222 223455554321 23
Q ss_pred cEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 475 VIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 475 ~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
.-+.+..+ + -.+.+.++.|+. |..|-+||-.
T Consensus 199 ~ai~~~~d~~a~g~~~al~~~g~~vP~di~vvg~d 233 (293)
T 2iks_A 199 QALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFG 233 (293)
T ss_dssp SEEEESSHHHHHHHHHHHHHHHSSCCSSCEEEEES
T ss_pred CEEEECChHHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 33333333 2 356777888987 5778777744
No 215
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=46.69 E-value=87 Score=32.37 Aligned_cols=129 Identities=12% Similarity=0.093 Sum_probs=76.5
Q ss_pred CeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEec--------------CCchh-------------
Q psy4654 377 TEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITG--------------RPDMQ------------- 429 (559)
Q Consensus 377 ~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTa--------------Rp~~~------------- 429 (559)
.+.||+=|-|++-.... -+-|+......++.+..+++.|++++.++| |+..+
T Consensus 4 ~k~iVIKiGGs~l~~~~-~~~~~~~l~~la~~Ia~l~~~G~~vVlV~gGgi~~g~~~lg~~~~~~~l~~~qa~aavGq~~ 82 (367)
T 2j5v_A 4 SQTLVVKLGTSVLTGGS-RRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSR 82 (367)
T ss_dssp CCEEEEEECHHHHTTTS-SSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHH
T ss_pred CCEEEEEECcHHhcCCC-CCcCHHHHHHHHHHHHHHHhCCCcEEEEEcCHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence 36678888888654432 234443445577778888889999999976 22211
Q ss_pred -hHHHHHHHhhCCCCCceeEecCCCCCChhhHH--HHHHHHHhhccCCcEEE----------EeCCccchhHHHhcCCCC
Q psy4654 430 -QGRVLSWLSQHNFPHGLVSFADGLSPGFLGHK--ASYLKSLIQDHGVVIHA----------AYGSNKDVSVYTSVGLKP 496 (559)
Q Consensus 430 -~~~T~~WL~qhglP~G~L~lr~g~~~dp~~~K--~~~L~~L~~~~~~~i~a----------afGN~~DV~aYr~vGI~~ 496 (559)
.....+.|.++|++-..+.+......+..++. ...++.|+...-+||.. .|+|...++++.+.-+..
T Consensus 83 l~~~~~~~l~~~G~~~~qvllt~~d~~~~~r~~n~~~~i~~LL~~g~IPIv~end~v~~~el~~gd~D~lAa~vA~~l~A 162 (367)
T 2j5v_A 83 LIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVATAEIKVGDNDNLSALAAILAGA 162 (367)
T ss_dssp HHHHHHHHHHTTTCCEEEEEECGGGGSSHHHHHHHHHHHHHHHHTTCEEEEEECTTSCCGGGCCCSHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCceEEEEEecccccCceEEEhHHHHHHHHHHCCCEEEECCCCceecccccCCCHHHHHHHHHHhcCC
Confidence 12234556788998877665432222222221 14666665433356654 255556677777777888
Q ss_pred CcEEEEcCCC
Q psy4654 497 RSIYIVGKVS 506 (559)
Q Consensus 497 ~~If~i~~~~ 506 (559)
..+++.....
T Consensus 163 d~LiilTDVd 172 (367)
T 2j5v_A 163 DKLLLLTDQK 172 (367)
T ss_dssp SEEEEEECC-
T ss_pred CEEEEeecCC
Confidence 7777665543
No 216
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=45.94 E-value=1.1e+02 Score=28.62 Aligned_cols=98 Identities=11% Similarity=0.035 Sum_probs=54.4
Q ss_pred chhHHHHHHHHHHC-C-C-eEEEEecCCch--hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhcc-
Q psy4654 402 RAGAVDIVRHWQEL-G-Y-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQDH- 472 (559)
Q Consensus 402 ~~GA~elv~~l~~~-G-Y-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~~- 472 (559)
..++..+.+.+.++ | + +|.|+++.+.. ..++. ++.|++++++...+...+ .+++.. .+.+++++...
T Consensus 114 ~~~g~~~~~~L~~~~G~~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~---~~~~~~-~~~~~~~l~~~~ 189 (289)
T 3brs_A 114 IQAGIRIGAVTKNLVRKSGKIGVISFVKNSKTAMDREEGLKIGLSDDSNKIEAIYYCD---SNYDKA-YDGTVELLTKYP 189 (289)
T ss_dssp HHHHHHHHHHHHHHTSSSCEEEEEESCTTSHHHHHHHHHHHHHHGGGGGGEEEEEECT---TCHHHH-HHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEECCCCCccHHHHHHHHHHHHHhCCCcEEeeecCC---CCHHHH-HHHHHHHHHhCC
Confidence 56677788888886 6 6 89999987542 23333 456667776532222221 233222 23344444321
Q ss_pred CCcEEEEeCC--c-cchhHHHhcCCCCCcEEEEcC
Q psy4654 473 GVVIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGK 504 (559)
Q Consensus 473 ~~~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~ 504 (559)
...-+.+..+ + -.+.+.++.|+. ..|-+||-
T Consensus 190 ~~~ai~~~~d~~a~g~~~al~~~G~~-~di~vvg~ 223 (289)
T 3brs_A 190 DISVMVGLNQYSATGAARAIKDMSLE-AKVKLVCI 223 (289)
T ss_dssp TEEEEEESSHHHHHHHHHHHHHTTCT-TTSEEEEE
T ss_pred CceEEEECCCcchHHHHHHHHhcCCC-CCEEEEEE
Confidence 2222333333 2 366778889998 77777763
No 217
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=45.69 E-value=86 Score=31.31 Aligned_cols=130 Identities=15% Similarity=0.147 Sum_probs=77.3
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEec-CCc---------hhhHH-------------
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITG-RPD---------MQQGR------------- 432 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTa-Rp~---------~~~~~------------- 432 (559)
..+.||.=|=|++-..+. -+-|+.....+++-+..+++.|++++.++| =+. ++.+.
T Consensus 49 ~~krIViKlGGs~L~~~~-~~ld~~~i~~la~~I~~l~~~G~~vviV~GgG~i~~g~~~~~~gl~~~~~d~~g~lat~~n 127 (281)
T 3nwy_A 49 GYSRVLLKLGGEMFGGGQ-VGLDPDVVAQVARQIADVVRGGVQIAVVIGGGNFFRGAQLQQLGMERTRSDYMGMLGTVMN 127 (281)
T ss_dssp CCSEEEEEECGGGGGTTS-SSCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTC---CCTTTTTCCHHHHHHHHHHHHHHH
T ss_pred cCcEEEEEEchhhccCCC-CCCCHHHHHHHHHHHHHHHHCCCeEEEEECChhHhhhHHHHhcCCCccchhHHHHHHHHHH
Confidence 457889999998765443 445655566788889999999999999994 111 11111
Q ss_pred ---HHHHHhhCCCCCceeEecC-CCCCChhhHHHHHHHHHhhccCCcEEEE-----eCCccchhHHHhcCCCCCcEEEEc
Q psy4654 433 ---VLSWLSQHNFPHGLVSFAD-GLSPGFLGHKASYLKSLIQDHGVVIHAA-----YGSNKDVSVYTSVGLKPRSIYIVG 503 (559)
Q Consensus 433 ---T~~WL~qhglP~G~L~lr~-g~~~dp~~~K~~~L~~L~~~~~~~i~aa-----fGN~~DV~aYr~vGI~~~~If~i~ 503 (559)
..+-|+++|+|---+.... +...++.. ....++ ++....++|..+ |+|...++++.+.-|....+.+..
T Consensus 128 ~~~l~~~L~~~Gi~a~~~~~~~~~~~~~~~~-~~~~l~-lL~~g~IpVv~g~~g~~~~~~D~~Aa~lA~~l~Ad~LiilT 205 (281)
T 3nwy_A 128 SLALQDFLEKEGIVTRVQTAITMGQVAEPYL-PLRAVR-HLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGADVVLMAK 205 (281)
T ss_dssp HHHHHHHHHHTTCCEEEEESSCCGGGSEECC-HHHHHH-HHHTTCEEEEESTTSSTTCCHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEecccccccccccc-hHHHHH-HHHcCCeEEEECCCCCCCCCHHHHHHHHHHHcCCCEEEEee
Confidence 1133678898862222111 11112211 223454 434444667665 455567888888888888877665
Q ss_pred CCCcc
Q psy4654 504 KVSKK 508 (559)
Q Consensus 504 ~~~~~ 508 (559)
..-+.
T Consensus 206 DVdGV 210 (281)
T 3nwy_A 206 AVDGV 210 (281)
T ss_dssp SSSSC
T ss_pred ccCcc
Confidence 54333
No 218
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=45.24 E-value=72 Score=29.84 Aligned_cols=103 Identities=13% Similarity=0.052 Sum_probs=57.8
Q ss_pred cCCCcccchhHHHHHHHHHHCCC---eEEEEecCCchh--hHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELGY---LIIYITGRPDMQ--QGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLK 466 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~GY---~IIYLTaRp~~~--~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~ 466 (559)
++.| -..++....++|.++|+ +|.|++|.+... .++. ++.|+++|++...... . ..+.+. -.+.++
T Consensus 101 V~~D--~~~~g~~a~~~L~~~g~g~~~I~~i~g~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~-~--~~~~~~-~~~~~~ 174 (271)
T 2dri_A 101 IASD--NVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAHKFNVLASQP-A--DFDRIK-GLNVMQ 174 (271)
T ss_dssp EEEC--HHHHHHHHHHHHHHHHCTTCEEEEEECCTTCHHHHHHHHHHHHHHHHHTCEEEEEEE-C--TTCHHH-HHHHHH
T ss_pred EecC--hHHHHHHHHHHHHHHcCCCCeEEEEECCCCCccHhHHHHHHHHHHhcCCCEEEEecC-C--CCCHHH-HHHHHH
Confidence 4445 35677788888888854 899999875432 3333 4566778886433221 1 122222 223344
Q ss_pred HHhhc-cCCcEEEEeCC--c-cchhHHHhcCCCCCcEEEEcCC
Q psy4654 467 SLIQD-HGVVIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 467 ~L~~~-~~~~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~~ 505 (559)
+++.. ....-..+..+ + -.+.+.++.|+ ..|-+||=.
T Consensus 175 ~ll~~~~~~~ai~~~nD~~A~g~~~al~~~g~--~dv~vvGfD 215 (271)
T 2dri_A 175 NLLTAHPDVQAVFAQNDEMALGALRALQTAGK--SDVMVVGFD 215 (271)
T ss_dssp HHHHHCTTCCEEEESSHHHHHHHHHHHHHHTC--CSCEEEEEE
T ss_pred HHHHhCCCccEEEECCCcHHHHHHHHHHHcCC--CCcEEEEec
Confidence 54432 12323333333 2 46778888999 577777743
No 219
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=44.82 E-value=1.4e+02 Score=28.12 Aligned_cols=101 Identities=15% Similarity=0.106 Sum_probs=58.0
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCCch--hhHHH---HHHHhhCCCCCcee-EecCCCCCChhhHHHHHHHHHhh-cc-
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLV-SFADGLSPGFLGHKASYLKSLIQ-DH- 472 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L-~lr~g~~~dp~~~K~~~L~~L~~-~~- 472 (559)
..++..+.+.|.++|| +|.|+++.+.. ..++. ++.|+++|++.... .... ..+++. -.+.+++++. ..
T Consensus 110 ~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g~~~~~~~~~~~--~~~~~~-~~~~~~~~l~~~~~ 186 (287)
T 3bbl_A 110 TAGTRQAVEYLIGRGHRRIAILAWPEDSRVGNDRLQGYLEAMQTAQLPIETGYILRG--EGTFEV-GRAMTLHLLDLSPE 186 (287)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEECCTTCHHHHHHHHHHHHHHHHTTCCCCGGGEEEC--CSSHHH-HHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHCCCCeEEEEeCCcccccHHHHHHHHHHHHHHcCCCCChhhEEeC--CCCHHH-HHHHHHHHHhhCCC
Confidence 5667778888888898 68899987542 23333 45667889876542 2222 122222 2234555543 21
Q ss_pred -CCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 473 -GVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 473 -~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
...-+.+..+ + -.+.+.++.|+. |..|-+||=.
T Consensus 187 ~~~~ai~~~~d~~a~g~~~al~~~G~~vP~di~vig~d 224 (287)
T 3bbl_A 187 RRPTAIMTLNDTMAIGAMAAARERGLTIGTDLAIIGFD 224 (287)
T ss_dssp TSCSEEEESSHHHHHHHHHHHHHTTCCBTTTBEEEEES
T ss_pred CCCcEEEECCcHHHHHHHHHHHHcCCCCCCCEEEEEEC
Confidence 2333333333 2 356778889987 5677777643
No 220
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=43.50 E-value=6.6 Score=42.90 Aligned_cols=84 Identities=19% Similarity=0.274 Sum_probs=55.8
Q ss_pred hhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeE-------ecCCCCCChhhHHHHHHHHHhhccCCc
Q psy4654 403 AGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVS-------FADGLSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 403 ~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~-------lr~g~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
.|++++.+.|.+.||+|+ -| .-|.++|+++|+|...|. |.+| +-+.++-|+.- -
T Consensus 21 ~glvelAk~L~~lGfeI~-AT-------gGTak~L~e~GI~v~~V~~vTgfPEil~G-RVKTLHP~ihg--G-------- 81 (523)
T 3zzm_A 21 TGLVDLAQGLSAAGVEII-ST-------GSTAKTIADTGIPVTPVEQLTGFPEVLDG-RVKTLHPRVHA--G-------- 81 (523)
T ss_dssp TTHHHHHHHHHHTTCEEE-EC-------HHHHHHHHTTTCCCEEHHHHHSCCCCTTT-TSSSCSHHHHH--H--------
T ss_pred ccHHHHHHHHHHCCCEEE-Ec-------chHHHHHHHcCCceeeccccCCCchhhCC-ccccCCchhhh--h--------
Confidence 579999999999999987 44 369999999999976554 2333 11111112110 1
Q ss_pred EEEEeCCccchhHHHhcCCCCCcEEEEcCC
Q psy4654 476 IHAAYGSNKDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 476 i~aafGN~~DV~aYr~vGI~~~~If~i~~~ 505 (559)
|.+.-+|..+++..++.||++-.+.+||=.
T Consensus 82 iLa~r~~~~h~~~l~~~~i~~iDlVvvNLY 111 (523)
T 3zzm_A 82 LLADLRKSEHAAALEQLGIEAFELVVVNLY 111 (523)
T ss_dssp HHCCTTSHHHHHHHHHHTCCCCSEEEEECC
T ss_pred hccCCCCHHHHHHHHHCCCCceeEEEEeCC
Confidence 122334566777788888888888888843
No 221
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=42.98 E-value=1.3e+02 Score=28.16 Aligned_cols=102 Identities=14% Similarity=0.067 Sum_probs=58.8
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCCc--hhhHHH---HHHHhhCCCCCcee-Eec-CCCCC---ChhhHHHHHHHHHhh
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRPD--MQQGRV---LSWLSQHNFPHGLV-SFA-DGLSP---GFLGHKASYLKSLIQ 470 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp~--~~~~~T---~~WL~qhglP~G~L-~lr-~g~~~---dp~~~K~~~L~~L~~ 470 (559)
..++..+.+.+.++|+ +|.|+++.+. ...++. ++.|+++|++.... +.. .+... +.+. -.+.+++++.
T Consensus 107 ~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~l~ 185 (288)
T 2qu7_A 107 EEAAYIATKRVLESTCKEVGLLLANPNISTTIGRKNGYNKAISEFDLNVNPSLIHYSDQQLGTNAQIYS-GYEATKTLLS 185 (288)
T ss_dssp HHHHHHHHHHHHTSSCCCEEEEECCTTSHHHHHHHHHHHHHHHHTTCCCCGGGEEECCSSCSHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcEEEEecCCCCCCHHHHHHHHHHHHHHcCCCCCcceEEeccCCccccCCHHH-HHHHHHHHHh
Confidence 5567778888989998 6889998754 223333 45667889876542 220 11110 2211 1234455544
Q ss_pred ccCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 471 DHGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 471 ~~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
. +..-+.+.++ + -.+.+.++.|+. |..|-+||-.
T Consensus 186 ~-~~~ai~~~~d~~a~g~~~al~~~g~~vP~di~vvg~d 223 (288)
T 2qu7_A 186 K-GIKGIVATNHLLLLGALQAIKESEKEIKKDVIIVGFD 223 (288)
T ss_dssp T-TCCEEEECSHHHHHHHHHHHHHSSCCBTTTBEEEEES
T ss_pred c-CCCEEEECCcHHHHHHHHHHHHhCCCCCCceEEEEeC
Confidence 3 3333334444 2 466778889986 5677777743
No 222
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=42.18 E-value=1.2e+02 Score=29.27 Aligned_cols=98 Identities=12% Similarity=-0.012 Sum_probs=54.0
Q ss_pred chhHHHHHHHHHHC--CC-eEEEEecCCch--hhHHH---HHHHhhC-CCCCceeEecCCCCCChhhHHHHHHHHHhhc-
Q psy4654 402 RAGAVDIVRHWQEL--GY-LIIYITGRPDM--QQGRV---LSWLSQH-NFPHGLVSFADGLSPGFLGHKASYLKSLIQD- 471 (559)
Q Consensus 402 ~~GA~elv~~l~~~--GY-~IIYLTaRp~~--~~~~T---~~WL~qh-glP~G~L~lr~g~~~dp~~~K~~~L~~L~~~- 471 (559)
..++..+.+.+.++ |+ +|.|+++.+.. ..++. ++.|+++ |++...+...+ .+++.- .+.+++++..
T Consensus 111 ~~~g~~a~~~L~~~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~pg~~~~~~~~~~---~~~~~~-~~~~~~ll~~~ 186 (325)
T 2x7x_A 111 YEIGRSVGNYIASSLKGKGNIVELTGLSGSTPAMERHQGFMAAISKFPDIKLIDKADAA---WERGPA-EIEMDSMLRRH 186 (325)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEEESCTTSHHHHHHHHHHHHHHHTCTEEEEEEEEECT---TSHHHH-HHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEECCCCCccHHHHHHHHHHHHHhCCCCEEEeeecCC---CCHHHH-HHHHHHHHHhC
Confidence 55667778888884 88 78899987542 23333 3455667 66543332221 122221 2334444432
Q ss_pred cCCcEEEEeCC--c-cchhHHHhcCCCCCcEEEEcC
Q psy4654 472 HGVVIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGK 504 (559)
Q Consensus 472 ~~~~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~ 504 (559)
....-+.+..+ + -.+.+.++.|+ |..|-+||-
T Consensus 187 ~~~~aI~~~nd~~A~g~~~al~~~Gi-p~dv~vig~ 221 (325)
T 2x7x_A 187 PKIDAVYAHNDRIAPGAYQAAKMAGR-EKEMIFVGI 221 (325)
T ss_dssp SCCCEEEESSTTHHHHHHHHHHHTTC-TTSSEEEEE
T ss_pred CCCCEEEECCCchHHHHHHHHHHcCC-CCCeEEEEE
Confidence 22333334444 2 36677888998 577777764
No 223
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=39.86 E-value=74 Score=29.88 Aligned_cols=102 Identities=9% Similarity=0.025 Sum_probs=56.2
Q ss_pred cCCCcccchhHHHHHHHHHHC--CC------eEEEEecCCch--hhHHH---HHHHhhC-CCCCceeEecCCCCCChhhH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQEL--GY------LIIYITGRPDM--QQGRV---LSWLSQH-NFPHGLVSFADGLSPGFLGH 460 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~--GY------~IIYLTaRp~~--~~~~T---~~WL~qh-glP~G~L~lr~g~~~dp~~~ 460 (559)
++.| -..+...+.+++.++ |+ +|.|+++.+.. ..++. ++.|+++ |++....... ..+++.-
T Consensus 108 V~~D--~~~~g~~~~~~l~~~~~g~~~~~~~~i~~i~g~~~~~~~~~R~~gf~~~l~~~~g~~~~~~~~~---~~~~~~~ 182 (293)
T 3l6u_A 108 ITSN--NQMIGEQLASYIKNELIKQTGRSTGRIVEITGTANVYTTNERHRGFLKGIENEPTLSIVDSVSG---NYDPVTS 182 (293)
T ss_dssp EEEC--HHHHHHHHHHHHHHHHHHHHSCSCEEEEEEECSTTCHHHHHHHHHHHHHHTTCTTEEEEEEEEC---TTCHHHH
T ss_pred EecC--HHHHHHHHHHHHHHHhccCCCCCCceEEEEECCCCCchHHHHHHHHHHHHHhCCCcEEeeeccC---CCCHHHH
Confidence 4444 255666777777774 55 59999987643 23333 4566677 7654433222 1223222
Q ss_pred HHHHHHHHhhc-cCCcEEEEeCC--c-cchhHHHhcCCCCCcEEEEcC
Q psy4654 461 KASYLKSLIQD-HGVVIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGK 504 (559)
Q Consensus 461 K~~~L~~L~~~-~~~~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~ 504 (559)
.+.+++++.. .....+.+..+ + -.+.+.++.|+. .|.+||=
T Consensus 183 -~~~~~~~l~~~~~~~ai~~~~d~~a~g~~~al~~~g~~--di~vig~ 227 (293)
T 3l6u_A 183 -ERVMRQVIDSGIPFDAVYCHNDDIAMGVLEALKKAKIS--GKIVVGI 227 (293)
T ss_dssp -HHHHHHHHHTTCCCSEEEESSHHHHHHHHHHHHHTTCC--CCEEEEE
T ss_pred -HHHHHHHHHhCCCCCEEEECCchHHHHHHHHHHhCCCC--CeEEEEe
Confidence 2334444432 23333333434 2 467888899998 7777764
No 224
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=39.80 E-value=1.2e+02 Score=29.00 Aligned_cols=108 Identities=9% Similarity=-0.046 Sum_probs=59.5
Q ss_pred cCCCcccchhHHHHHHHHH-HCCC-eEEEEecCCch--hhHHH---HHHHhhCCCCCceeEecC--CCCCChhhHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQ-ELGY-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLVSFAD--GLSPGFLGHKASYL 465 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~-~~GY-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L~lr~--g~~~dp~~~K~~~L 465 (559)
++.| -..+...+.+.+. ++|+ +|.|+++.+.. ..++. ++.|++++.+.+.-+... ....+++.- .+.+
T Consensus 102 V~~D--~~~~g~~a~~~L~~~~G~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 178 (313)
T 3m9w_A 102 ISFD--NEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENA-LKIM 178 (313)
T ss_dssp EEEC--HHHHHHHHHHHHHHHCSSEEEEEEESCTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEEECGGGCHHHH-HHHH
T ss_pred EecC--HHHHHHHHHHHHHHhCCCCcEEEEECCCCCccHHHHHHHHHHHHHhhccCCCEEEEeeccCCCcCHHHH-HHHH
Confidence 4445 3566778888888 8898 78899987653 23333 455666632222211110 001223222 2334
Q ss_pred HHHhhc--cCCcEEEEeCC--c-cchhHHHhcCCCCCcEEEEcCCC
Q psy4654 466 KSLIQD--HGVVIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGKVS 506 (559)
Q Consensus 466 ~~L~~~--~~~~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~~~ 506 (559)
++++.. ....-+.+..+ + -.+.+.++.|+. ..|.+||-.+
T Consensus 179 ~~~l~~~~~~~~ai~~~~d~~a~g~~~al~~~G~~-~di~vig~d~ 223 (313)
T 3m9w_A 179 ENALTANNNKIDAVVASNDATAGGAIQALSAQGLS-GKVAISGQDA 223 (313)
T ss_dssp HHHHHHTTTCCCEEEESSHHHHHHHHHHHHTTTCT-TTSEECCCSC
T ss_pred HHHHHhCCCCeeEEEECCCchHHHHHHHHHHcCCC-CCcEEEecCC
Confidence 444432 23333334444 2 477888999998 7898988654
No 225
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=36.76 E-value=2.2e+02 Score=26.39 Aligned_cols=100 Identities=15% Similarity=0.193 Sum_probs=59.4
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCCch--hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhc--cC
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQD--HG 473 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~--~~ 473 (559)
..++..+.+.+.++|+ +|.|+++.+.. ..++. ++.|+++|++.. ++ ... .+++.- .+.++++++. ..
T Consensus 103 ~~~~~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~-~~-~~~--~~~~~~-~~~~~~~l~~~~~~ 177 (277)
T 3cs3_A 103 RGGATQAIEQFVNVGSKKVLLLSGPEKGYDSQERLAVSTRELTRFGIPYE-II-QGD--FTEPSG-YAAAKKILSQPQTE 177 (277)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHHTTCCEE-EE-ECC--SSHHHH-HHHHHHHTTSCCCS
T ss_pred HHHHHHHHHHHHHcCCceEEEEeCCccCccHHHHHHHHHHHHHHcCCCee-EE-eCC--CChhHH-HHHHHHHHhcCCCC
Confidence 5667778888989998 78899987542 23333 456678898765 33 221 122221 2345555442 12
Q ss_pred CcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCCC
Q psy4654 474 VVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKVS 506 (559)
Q Consensus 474 ~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~~ 506 (559)
..-+.+.++ + -.+.+.++.|+. |..|-+||=.+
T Consensus 178 ~~ai~~~~d~~a~g~~~al~~~g~~vP~di~vvg~d~ 214 (277)
T 3cs3_A 178 PVDVFAFNDEMAIGVYKYVAETNYQMGKDIRIIGFDN 214 (277)
T ss_dssp SEEEEESSHHHHHHHHHHHTTSSCCBTTTEEEECSSC
T ss_pred CcEEEEcChHHHHHHHHHHHHcCCCCCCcEEEEEeCC
Confidence 333333333 2 366778889986 67888888543
No 226
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=36.60 E-value=81 Score=30.61 Aligned_cols=101 Identities=14% Similarity=0.048 Sum_probs=56.6
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCCch--hhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhccCCc
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQDHGVV 475 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~~ 475 (559)
..++..+.++|.++|| +|.|+++.+.. ..++. ++.|+++|++.. .....+. .+.+.- .+.++.++......
T Consensus 157 ~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~-~~~~~~~-~~~~~~-~~~~~~ll~~~~~~ 233 (330)
T 3ctp_A 157 YNGGRMAFDHLYEKGCRKILHIKGPEVFEATELRYKGFLDGARAKDLEID-FIEFQHD-FQVKML-EEDINSMKDIVNYD 233 (330)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEECCTTCHHHHHHHHHHHHHHHHTTCCCE-EEECSSS-CCGGGG-GCCCTTGGGGGGSS
T ss_pred HHHHHHHHHHHHHCCCCeEEEEeCCccCccHHHHHHHHHHHHHHcCCCcc-eeEEcCC-CCHHHH-HHHHHHHhcCCCCc
Confidence 5667788899999999 68899987542 23333 566778998765 3222211 111110 11233333221222
Q ss_pred EEEEeCC--c-cchhHHHhcCCC-CCcEEEEcCC
Q psy4654 476 IHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGKV 505 (559)
Q Consensus 476 i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~~ 505 (559)
-+.+..+ + -.+.+.++.|+. |..|-+||-.
T Consensus 234 ai~~~~d~~A~g~~~al~~~G~~vP~disvvg~D 267 (330)
T 3ctp_A 234 GIFVFNDIAAATVMRALKKRGVSIPQEVQIIGFD 267 (330)
T ss_dssp EEEESSHHHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCCCCeEEEEEC
Confidence 2333333 2 356777889986 5678888754
No 227
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=36.59 E-value=1.2e+02 Score=27.79 Aligned_cols=96 Identities=8% Similarity=0.044 Sum_probs=55.1
Q ss_pred chhHHHHHHHHHHCCC-eEEEEecCC-c--hhhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhccCC
Q psy4654 402 RAGAVDIVRHWQELGY-LIIYITGRP-D--MQQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY-~IIYLTaRp-~--~~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~~~~ 474 (559)
..++..+.++|.++|| +|.|+++.+ . ...++. ++.|+++|++... + .. ..+++. -.+.+++++. .+.
T Consensus 100 ~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~~R~~gf~~al~~~g~~~~~-~-~~--~~~~~~-~~~~~~~~l~-~~~ 173 (255)
T 1byk_A 100 EGAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHPVA-A-LP--GLAMKQ-GYENVAKVIT-PET 173 (255)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCCTTSTTTTHHHHHHHHHHHHHTTCCCEE-E-CC--CSCHHH-HHHHSGGGCC-TTC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEecCCCCcccHHHHHHHHHHHHHHcCCCcce-e-ec--CCccch-HHHHHHHHhc-CCC
Confidence 5677788899999999 688999863 2 233343 4667789987542 2 21 112211 1233444432 223
Q ss_pred cEEEEeCC--c-cchhHHHhcCCCCCcEEEEcCC
Q psy4654 475 VIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 475 ~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~~ 505 (559)
.-+.+..+ + -.+.+.++.|+ ..|-+||=.
T Consensus 174 ~ai~~~~d~~A~g~~~al~~~g~--~di~vig~d 205 (255)
T 1byk_A 174 TALLCATDTLALGASKYLQEQRI--DTLQLASVG 205 (255)
T ss_dssp CEEEESSHHHHHHHHHHHHHTTC--CSCEEEEEC
T ss_pred CEEEEeChHHHHHHHHHHHHcCC--CcEEEEEeC
Confidence 22333333 2 36677788999 567776643
No 228
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=36.56 E-value=1e+02 Score=28.62 Aligned_cols=35 Identities=26% Similarity=0.383 Sum_probs=24.5
Q ss_pred HHHHHHHHhhccCCc--EEEEeCC-ccchhHHHhcCCC
Q psy4654 461 KASYLKSLIQDHGVV--IHAAYGS-NKDVSVYTSVGLK 495 (559)
Q Consensus 461 K~~~L~~L~~~~~~~--i~aafGN-~~DV~aYr~vGI~ 495 (559)
|...++.+.+..++. =..+||| .+|+.+.+.+|+.
T Consensus 184 K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~ 221 (258)
T 2pq0_A 184 KAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTG 221 (258)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEE
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcE
Confidence 555666665433433 3678999 6999999999974
No 229
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=34.71 E-value=1.2e+02 Score=28.66 Aligned_cols=104 Identities=12% Similarity=-0.039 Sum_probs=58.6
Q ss_pred cCCCcccchhHHHHHHHHHHCC--C-eEEEEecCCch--hhHH---HHHHHhhCCCCCceeEecCCCCCChhhHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELG--Y-LIIYITGRPDM--QQGR---VLSWLSQHNFPHGLVSFADGLSPGFLGHKASYLK 466 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~G--Y-~IIYLTaRp~~--~~~~---T~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~ 466 (559)
++.| -..+...+.+.+.++| + +|.++++.+.. ..++ -++.|+++|++...+. . ..+++... ..++
T Consensus 108 V~~D--~~~~g~~a~~~l~~~g~~~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~g~~~~~~~--~--~~~~~~~~-~~~~ 180 (297)
T 3rot_A 108 LGSD--NLLAGKKLGEKALELTPSAKRALVLNPQPGHIGLEKRAYGIKTILQDKGIFFEELD--V--GTDPNQVQ-SRVK 180 (297)
T ss_dssp EECC--HHHHHHHHHHHHHHHCTTCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEE--C--CSCHHHHH-HHHH
T ss_pred EccC--hHHHHHHHHHHHHHhcCCCceEEEEeCCCCcHHHHHHHHHHHHHHHhcCCeEEEee--c--CCChHHHH-HHHH
Confidence 5556 3566778888888888 6 78899887653 2233 3566778888654433 1 12232222 3344
Q ss_pred HHhh-ccCCcEEEEeCC--c-cchhHHHhcCCC-CC-cEEEEcCC
Q psy4654 467 SLIQ-DHGVVIHAAYGS--N-KDVSVYTSVGLK-PR-SIYIVGKV 505 (559)
Q Consensus 467 ~L~~-~~~~~i~aafGN--~-~DV~aYr~vGI~-~~-~If~i~~~ 505 (559)
.++. .....-+.+..+ + -.+.+.++.|+. |. .|.+||-.
T Consensus 181 ~~l~~~~~~~ai~~~~d~~A~g~~~al~~~g~~vP~~dv~vig~D 225 (297)
T 3rot_A 181 SYFKIHPETNIIFCLTSQALDPLGQMLLHPDRYDFNYQPQVYSFD 225 (297)
T ss_dssp HHHHHCTTCCEEEESSHHHHHHHHHHHHSHHHHTCCCCCEEEEEC
T ss_pred HHHHhCCCCCEEEEcCCcchHHHHHHHHhcCCccCCCceEEEEeC
Confidence 4333 223333333333 2 367778888974 23 66666643
No 230
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=34.66 E-value=1.6e+02 Score=27.77 Aligned_cols=104 Identities=10% Similarity=0.025 Sum_probs=58.8
Q ss_pred cCCCcccchhHHHHHHHHHHC-C--C-eEEEEecCCch--hhHHH---HHHHhhC-CCCCceeEecCCCCCChhhHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQEL-G--Y-LIIYITGRPDM--QQGRV---LSWLSQH-NFPHGLVSFADGLSPGFLGHKASY 464 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~-G--Y-~IIYLTaRp~~--~~~~T---~~WL~qh-glP~G~L~lr~g~~~dp~~~K~~~ 464 (559)
++.| -..++....++|.++ | | +|.|++|.+.. ..++. ++.|+++ |++...+. ... .+.+. -.+.
T Consensus 110 V~~D--~~~~g~~a~~~L~~~~G~~~~~I~~i~g~~~~~~~~~R~~Gf~~al~~~~g~~~~~~~-~~~--~~~~~-~~~~ 183 (288)
T 1gud_A 110 VTTD--NVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQ-PAD--WDRIK-ALDV 183 (288)
T ss_dssp EECC--HHHHHHHHHHHHHHHHGGGCEEEEEEECSTTCHHHHHHHHHHHHHHHTCTTEEEEEEE-ECT--TCHHH-HHHH
T ss_pred ECCC--hHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCCchHhHHHHHHHHHHHhCCCcEEEEee-cCC--ccHHH-HHHH
Confidence 4556 366778888999888 8 6 89999987543 23333 4566667 76433222 111 12211 1233
Q ss_pred HHHHhhc-cCCcEEEEeCC--c-cchhHHHhcCCCCCcEEEEcCC
Q psy4654 465 LKSLIQD-HGVVIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 465 L~~L~~~-~~~~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~~ 505 (559)
+++++.. ....-+.+..+ + -.+.+.++.|++ .+|-+||=.
T Consensus 184 ~~~ll~~~~~~~ai~~~nD~~A~g~~~al~~~G~~-~dv~vvGfD 227 (288)
T 1gud_A 184 ATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKT-GKVLVVGTD 227 (288)
T ss_dssp HHHHHHHCTTCCEEEESSHHHHHHHHHHHHHTTCT-TTSEEEEES
T ss_pred HHHHHHhCCCceEEEECCCchHHHHHHHHHhcCCC-CCeEEEEeC
Confidence 4454432 12222333333 2 467788889996 778888754
No 231
>3fau_A NEDD4-binding protein 2; SMR, small-MUTS related domain, nicking endonuclease, alternative splicing, ATP-binding, coiled coil, cytoplasm, hydrolase; 1.90A {Homo sapiens} SCOP: d.68.8.1
Probab=34.31 E-value=70 Score=25.63 Aligned_cols=31 Identities=29% Similarity=0.414 Sum_probs=23.4
Q ss_pred CCC-eEEEEecCCc----h---hhHHHHHHHhhCCCCCc
Q psy4654 415 LGY-LIIYITGRPD----M---QQGRVLSWLSQHNFPHG 445 (559)
Q Consensus 415 ~GY-~IIYLTaRp~----~---~~~~T~~WL~qhglP~G 445 (559)
.|. .+.++||+.. + ++..+.+||.++++.+.
T Consensus 32 ~g~~~v~II~GkG~hS~~g~~~Lk~~V~~~L~~~~~~~~ 70 (82)
T 3fau_A 32 GGKPYLSVITGRGNHSQGGVARIKPAVIKYLISHSFRFS 70 (82)
T ss_dssp CCCCEEEEECCC---------CHHHHHHHHHHHTTCCEE
T ss_pred CCceEEEEEECCCCCCCCCcchHHHHHHHHHHhCCCcee
Confidence 666 6789999864 3 78889999999988764
No 232
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=34.28 E-value=3.1e+02 Score=26.00 Aligned_cols=104 Identities=13% Similarity=0.042 Sum_probs=57.1
Q ss_pred cCCCcccchhHHHHHHHHHHC--CC-eEEEEecCCc--hhhHH---HHHHHhhCCCCCceeEecCCCCCChhhHHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQEL--GY-LIIYITGRPD--MQQGR---VLSWLSQHNFPHGLVSFADGLSPGFLGHKASYLK 466 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~--GY-~IIYLTaRp~--~~~~~---T~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~ 466 (559)
++.|. ..+...+.+.+.++ |+ +|.|+++.+. ...++ -++.|+++|++...+... ..+++.. .+.++
T Consensus 101 V~~d~--~~~g~~a~~~L~~~~~G~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~---~~~~~~~-~~~~~ 174 (313)
T 2h3h_A 101 IGTDN--YQAGYTAGLIMKELLGGKGKVVIGTGSLTAMNSLQRIQGFKDAIKDSEIEIVDILND---EEDGARA-VSLAE 174 (313)
T ss_dssp EECCH--HHHHHHHHHHHHHHHTSCSEEEEEESCSSCHHHHHHHHHHHHHHTTSSCEEEEEEEC---SSCHHHH-HHHHH
T ss_pred ECcCH--HHHHHHHHHHHHHHcCCCCEEEEEECCCCCccHHHHHHHHHHHhcCCCCEEEEeecC---CCCHHHH-HHHHH
Confidence 44552 45566777788777 87 7899998743 22333 355667778764433222 1223222 23344
Q ss_pred HHhhc-cCCc-EEEEeCC-c-cchhHHHhcCCCCCcEEEEcCC
Q psy4654 467 SLIQD-HGVV-IHAAYGS-N-KDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 467 ~L~~~-~~~~-i~aafGN-~-~DV~aYr~vGI~~~~If~i~~~ 505 (559)
+++.. .... |++.-+. + -.+.+.++.|+| ..|-+||-.
T Consensus 175 ~~l~~~~~~~ai~~~~d~~a~g~~~al~~~G~p-~dv~vvg~d 216 (313)
T 2h3h_A 175 AALNAHPDLDAFFGVYAYNGPAQALVVKNAGKV-GKVKIVCFD 216 (313)
T ss_dssp HHHHHCTTCCEEEECSTTHHHHHHHHHHHTTCT-TTSEEEEEC
T ss_pred HHHHHCcCceEEEEcCCCccHHHHHHHHHcCCC-CCeEEEEeC
Confidence 44432 1233 3443333 2 467788889964 667777644
No 233
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=34.09 E-value=30 Score=33.13 Aligned_cols=99 Identities=13% Similarity=0.128 Sum_probs=60.2
Q ss_pred ccchhHHHHHHHHHHC-CCeEEEEecCCc------------------hhhHHHHHHHhhCCCCCceeEe-----------
Q psy4654 400 KVRAGAVDIVRHWQEL-GYLIIYITGRPD------------------MQQGRVLSWLSQHNFPHGLVSF----------- 449 (559)
Q Consensus 400 ~~~~GA~elv~~l~~~-GY~IIYLTaRp~------------------~~~~~T~~WL~qhglP~G~L~l----------- 449 (559)
+..+++.++++.++++ |+.+...|.-.. ...+.+...|.+.|+.......
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 201 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY 201 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence 4678999999999888 888776665311 1234556777776653222111
Q ss_pred -cCCC-CCChhhHHHHHHHHHhhccCC--cEEEEeCC-ccchhHHHhcCCCCCcEEEEcCC
Q psy4654 450 -ADGL-SPGFLGHKASYLKSLIQDHGV--VIHAAYGS-NKDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 450 -r~g~-~~dp~~~K~~~L~~L~~~~~~--~i~aafGN-~~DV~aYr~vGI~~~~If~i~~~ 505 (559)
.+.. .. .-|...++.++...++ .-...+|| .+|+.+.+.+|+. ++++..
T Consensus 202 ~~~~~~~~---~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~----~~~~~~ 255 (289)
T 3gyg_A 202 DVDFIPIG---TGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNG----YLLKNA 255 (289)
T ss_dssp EEEEEESC---CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEE----EECTTC
T ss_pred EEEEEeCC---CCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcE----EEECCc
Confidence 1000 11 2366666666543343 33678899 7999999999943 455544
No 234
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=33.62 E-value=13 Score=38.88 Aligned_cols=15 Identities=33% Similarity=0.711 Sum_probs=13.1
Q ss_pred CeeEEEeeccceecc
Q psy4654 377 TEVVVFSVDGSFTAS 391 (559)
Q Consensus 377 ~k~VIfDIDGTlt~s 391 (559)
+|.|+||+||+|..-
T Consensus 1 ~~~~~fdvdgv~~~~ 15 (384)
T 1qyi_A 1 MKKILFDVDGVFLSE 15 (384)
T ss_dssp CCEEEECSBTTTBCS
T ss_pred CceEEEecCceeech
Confidence 588999999999864
No 235
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=32.99 E-value=2.1e+02 Score=26.73 Aligned_cols=103 Identities=12% Similarity=0.049 Sum_probs=55.9
Q ss_pred cCCCcccchhHHHHHHHHHHC-C-C-eEEEEecCCch--hhHHH---HHHHhhC-CCCCceeEecCCCCCChhhHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQEL-G-Y-LIIYITGRPDM--QQGRV---LSWLSQH-NFPHGLVSFADGLSPGFLGHKASYL 465 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~-G-Y-~IIYLTaRp~~--~~~~T---~~WL~qh-glP~G~L~lr~g~~~dp~~~K~~~L 465 (559)
++.| -..++..+.++|.++ | + +|.|+++.+.. ..++. ++.|+++ |++...+. ... .+.+. -.+.+
T Consensus 101 V~~D--~~~~g~~a~~~L~~~~gg~~~I~~i~g~~~~~~~~~R~~Gf~~al~~~~~~~~~~~~-~~~--~~~~~-~~~~~ 174 (283)
T 2ioy_A 101 IASD--NVKGGEMAAEFIAKALKGKGNVVELEGIPGASAARDRGKGFDEAIAKYPDIKIVAKQ-AAD--FDRSK-GLSVM 174 (283)
T ss_dssp EEEC--HHHHHHHHHHHHHHHTTTCEEEEEEECCTTCHHHHHHHHHHHHHHTTCTTEEEEEEE-ECT--TCHHH-HHHHH
T ss_pred EecC--hHHHHHHHHHHHHHHcCCCceEEEEECCCCCccHHHHHHHHHHHHHhCCCCEEEeec-cCC--CCHHH-HHHHH
Confidence 4445 356778888999888 4 7 78999986532 23333 4566677 66432211 111 12221 12234
Q ss_pred HHHhhc-cCCcEEEEeCC--c-cchhHHHhcCCCCCcEEEEcCC
Q psy4654 466 KSLIQD-HGVVIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 466 ~~L~~~-~~~~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~~ 505 (559)
++++.. ....-+.+..+ + -.+.+.++.|+ ..|-+||=.
T Consensus 175 ~~ll~~~~~~~ai~~~nD~~A~g~~~al~~~G~--~di~viG~D 216 (283)
T 2ioy_A 175 ENILQAQPKIDAVFAQNDEMALGAIKAIEAANR--QGIIVVGFD 216 (283)
T ss_dssp HHHHHHCSCCCEEEESSHHHHHHHHHHHHHTTC--CCCEEEEEE
T ss_pred HHHHHhCCCccEEEECCchHHHHHHHHHHHCCC--CCcEEEEeC
Confidence 444432 22333333333 3 45677788999 667777743
No 236
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=32.12 E-value=2.7e+02 Score=26.45 Aligned_cols=132 Identities=12% Similarity=0.104 Sum_probs=76.2
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEec-CCc--hh-------hHH-------------
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITG-RPD--MQ-------QGR------------- 432 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTa-Rp~--~~-------~~~------------- 432 (559)
..+.+|.=|-|+.-..+.-.+-|+.....+++.+..+++.|++++.++| .+. .. ...
T Consensus 7 ~~k~iViKlGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vVlVhGgG~~~~~~~~~~~g~~~~~~d~~~~~~~~~~ 86 (247)
T 2a1f_A 7 IYKRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFRGAKLAKAGMNRVVGDHMGMLATVMN 86 (247)
T ss_dssp SCSEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCCHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred cccEEEEEEChhhhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCChHhcchhHHHcCCCCCcHHHHHHHHHHHH
Confidence 4578899999987544322223443445577777788889999998884 332 11 111
Q ss_pred ---HHHHHhhCCCCCceeEecCCC-CCChhhHHHHHHHHHhhccCCcEEEE-----eCCccchhHHHhcCCCCCcEEEEc
Q psy4654 433 ---VLSWLSQHNFPHGLVSFADGL-SPGFLGHKASYLKSLIQDHGVVIHAA-----YGSNKDVSVYTSVGLKPRSIYIVG 503 (559)
Q Consensus 433 ---T~~WL~qhglP~G~L~lr~g~-~~dp~~~K~~~L~~L~~~~~~~i~aa-----fGN~~DV~aYr~vGI~~~~If~i~ 503 (559)
..+.|.++|++.-.+...... ..++... ... +.++....++|..+ |+|...++++.+.-+.+..+.++.
T Consensus 87 ~~ll~~~l~~~G~~~~~~~~~~~~~~~~~~~~-~~~-~~ll~~g~ipVi~~~~g~~~~~~D~~Aa~lA~~l~Ad~liilT 164 (247)
T 2a1f_A 87 GLAMRDSLFRADVNAKLMSAFQLNGICDTYNW-SEA-IKMLREKRVVIFSAGTGNPFFTTDSTACLRGIEIEADVVLKAT 164 (247)
T ss_dssp HHHHHHHHHHTTCCEEEEESSCCTTTSEECCH-HHH-HHHHHTTCEEEEESTTSCSSCCHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEecccccccccchhhH-HHH-HHHHhCCCEEEEeCCcCCCCCCcHHHHHHHHHhCCCCEEEEEe
Confidence 345566788876544433211 1112222 222 45544334566663 334456788888888898887776
Q ss_pred CCCccc
Q psy4654 504 KVSKKH 509 (559)
Q Consensus 504 ~~~~~~ 509 (559)
...+.+
T Consensus 165 DVdGvy 170 (247)
T 2a1f_A 165 KVDGVY 170 (247)
T ss_dssp SSSSCB
T ss_pred CCCccc
Confidence 654433
No 237
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=37.67 E-value=10 Score=36.71 Aligned_cols=17 Identities=18% Similarity=0.491 Sum_probs=14.6
Q ss_pred CCeeEEEeeccceeccc
Q psy4654 376 RTEVVVFSVDGSFTASV 392 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd 392 (559)
..++|+||-|||||...
T Consensus 27 ~i~~v~fDktGTLT~g~ 43 (263)
T 2yj3_A 27 EIDTIIFEKTGTLTYGT 43 (263)
Confidence 35899999999999864
No 238
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=31.43 E-value=2.2e+02 Score=26.82 Aligned_cols=131 Identities=10% Similarity=0.063 Sum_probs=75.5
Q ss_pred CCeeEEEeeccceeccccccCCCcccchhHHHHHHHHHHCCCeEEEEec-CCc--h-------hhHH-------------
Q psy4654 376 RTEVVVFSVDGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYLIIYITG-RPD--M-------QQGR------------- 432 (559)
Q Consensus 376 ~~k~VIfDIDGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~IIYLTa-Rp~--~-------~~~~------------- 432 (559)
..+.+|.=|-|+.-....-.+-|+.....+++.+..+++.|++++.++| .+. + ....
T Consensus 6 ~~~~iViK~GGs~l~~~~~~~~~~~~~~~~~~~i~~l~~~g~~vviV~GgG~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (239)
T 1ybd_A 6 KYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVSAQAGSMDRATADYMGMMATVMN 85 (239)
T ss_dssp SCSEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEchHHhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCcHHHhchhHHHcCCCCccHHHHHHHHHHHH
Confidence 3477888899987654321222443445677778888889999999986 222 1 1111
Q ss_pred ---HHHHHhhCCCCCceeEecCC-CCCChhhHHHHHHHHHhhccCCcEEEEeC-----CccchhHHHhcCCCCCcEEEEc
Q psy4654 433 ---VLSWLSQHNFPHGLVSFADG-LSPGFLGHKASYLKSLIQDHGVVIHAAYG-----SNKDVSVYTSVGLKPRSIYIVG 503 (559)
Q Consensus 433 ---T~~WL~qhglP~G~L~lr~g-~~~dp~~~K~~~L~~L~~~~~~~i~aafG-----N~~DV~aYr~vGI~~~~If~i~ 503 (559)
..+.|.++|++.-.+..... ...+... ....+ .++....++|..+++ |...++++.+.-+..+.+.+..
T Consensus 86 ~~l~~~~l~~~G~~~~~~~~~~~~~~~~~~~-~~~~~-~ll~~g~ipVv~g~~g~~~~~~D~~Aa~lA~~l~Ad~liilT 163 (239)
T 1ybd_A 86 ALALKDAFETLGIKARVQSALSMQQIAETYA-RPKAI-QYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKAT 163 (239)
T ss_dssp HHHHHHHHHHTTCCEEEEESSCBSSSCEECC-HHHHH-HHHHTTCEEEEESTTSSTTCCHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCeEEEeeecccccccchh-HHHHH-HHHhCCcEEEEECCccCCCCCcHHHHHHHHHhcCCCEEEEee
Confidence 24566677876544433321 1111111 22334 343333457776443 4567888888889999888877
Q ss_pred CCCcc
Q psy4654 504 KVSKK 508 (559)
Q Consensus 504 ~~~~~ 508 (559)
...+.
T Consensus 164 dVdGv 168 (239)
T 1ybd_A 164 NVDGV 168 (239)
T ss_dssp SSSSC
T ss_pred CCCcc
Confidence 65433
No 239
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=31.10 E-value=67 Score=28.58 Aligned_cols=39 Identities=21% Similarity=0.437 Sum_probs=32.0
Q ss_pred chhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeE
Q psy4654 402 RAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVS 448 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~ 448 (559)
.++++++.+.+.+.||+|+ -| ..|.+||+++|+|--.+.
T Consensus 36 K~~l~~~a~~l~~lGf~i~-AT-------~GTa~~L~~~Gi~v~~v~ 74 (143)
T 2yvq_A 36 RPRFLGVAEQLHNEGFKLF-AT-------EATSDWLNANNVPATPVA 74 (143)
T ss_dssp HHHHHHHHHHHHTTTCEEE-EE-------HHHHHHHHHTTCCCEEEC
T ss_pred hHHHHHHHHHHHHCCCEEE-EC-------chHHHHHHHcCCeEEEEE
Confidence 4678999999999999854 44 478999999999877664
No 240
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=30.24 E-value=1.8e+02 Score=27.10 Aligned_cols=105 Identities=10% Similarity=-0.050 Sum_probs=57.2
Q ss_pred cCCCcccchhHHHHHHHHHH--CCC-eEEEEecCCchh--hHHH---HHHHhhC-CCC-CceeEecCCCCCChhhHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQE--LGY-LIIYITGRPDMQ--QGRV---LSWLSQH-NFP-HGLVSFADGLSPGFLGHKASY 464 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~--~GY-~IIYLTaRp~~~--~~~T---~~WL~qh-glP-~G~L~lr~g~~~dp~~~K~~~ 464 (559)
++.| -..+...+.+++.+ +|+ +|.|+++.+... .++. ++.|+++ |++ ........+ ..+++.- .+.
T Consensus 103 V~~D--~~~~g~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~-~~~~~~~-~~~ 178 (291)
T 3l49_A 103 TTSN--NYSIGAELALQMVADLGGKGNVLVFNGFYSVPVCKIRYDQMKYVLEAFPDVKIIEPELRDVI-PNTIQSA-YSN 178 (291)
T ss_dssp EEEC--HHHHHHHHHHHHHHHHTTCEEEEEECSCTTSHHHHHHHHHHHHHHHTCTTEEECSSCBCCCS-SSHHHHH-HHH
T ss_pred EecC--hHHHHHHHHHHHHHHcCCCceEEEEeCCCCCchHHHHHHHHHHHHHHCCCCEEEeeeccCCC-CCCHHHH-HHH
Confidence 4455 35677888889988 898 788998875432 2333 4556677 454 222211111 1122222 233
Q ss_pred HHHHhhcc----CCcEEEEeCC--c-cchhHHHhcCCCCCcEEEEcCC
Q psy4654 465 LKSLIQDH----GVVIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 465 L~~L~~~~----~~~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~~ 505 (559)
+++++... +..-+.+..+ + -.+.+.++.|+. .|-+||-.
T Consensus 179 ~~~~l~~~~~~~~~~ai~~~~d~~a~g~~~al~~~g~~--di~vvg~d 224 (291)
T 3l49_A 179 VTDMLTKYPNEGDVGAIWACWDVPMIGATQALQAAGRT--DIRTYGVD 224 (291)
T ss_dssp HHHHHHHCCSTTSCCEEEESSHHHHHHHHHHHHHTTCC--SCEEEEEE
T ss_pred HHHHHHhCCCcCCcCEEEECCCchHHHHHHHHHHcCCC--CeEEEEec
Confidence 44444322 2333333333 2 367888999998 77777643
No 241
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=30.09 E-value=2.1e+02 Score=27.50 Aligned_cols=105 Identities=12% Similarity=-0.017 Sum_probs=59.5
Q ss_pred cCCCcccchhHHHHHHHHHH--CCC-eEEEEecCCch--hhHHH---HHHHhhC-CCCCceeEecCCCCCChhhHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQE--LGY-LIIYITGRPDM--QQGRV---LSWLSQH-NFPHGLVSFADGLSPGFLGHKASYL 465 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~--~GY-~IIYLTaRp~~--~~~~T---~~WL~qh-glP~G~L~lr~g~~~dp~~~K~~~L 465 (559)
++.| ...++..+.+.|.+ +|+ +|.|+++.+.. ..++. ++.|+++ |++...+...+ .+++.. .+.+
T Consensus 114 V~~D--~~~~g~~a~~~L~~~~~G~~~I~~i~g~~~~~~~~~R~~Gf~~al~~~pgi~~~~~~~~~---~~~~~~-~~~~ 187 (332)
T 2rjo_A 114 LSYD--GVAYGEETATQLFKSMGGKGGVVALGGIFSNVPAIERKAGLDAALKKFPGIQLLDFQVAD---WNSQKA-FPIM 187 (332)
T ss_dssp EECC--HHHHHHHHHHHHHHHTTTCEEEEEEECCTTCHHHHHHHHHHHHHHHTCTTEEEEEEEECT---TCHHHH-HHHH
T ss_pred EccC--hHHHHHHHHHHHHHHcCCCCeEEEEECCCCCccHHHHHHHHHHHHHhCCCcEEEeeccCC---CCHHHH-HHHH
Confidence 4455 35667788888888 798 78899987542 23333 4566777 77654433221 122222 2234
Q ss_pred HHHhhc--cCCcEEEEeCC--c-cchhHHHhcCCCCCcEEEEcCCC
Q psy4654 466 KSLIQD--HGVVIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGKVS 506 (559)
Q Consensus 466 ~~L~~~--~~~~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~~~ 506 (559)
++++.. ....-+.+..+ + -.+.+.++.|+. ..|-+||=.+
T Consensus 188 ~~ll~~~~~~~~aI~~~nd~~A~g~~~al~~~G~~-~di~vvg~D~ 232 (332)
T 2rjo_A 188 QAWMTRFNSKIKGVWAANDDMALGAIEALRAEGLA-GQIPVTGMDG 232 (332)
T ss_dssp HHHHHHHGGGEEEEEESSHHHHHHHHHHHHHTTCB-TTBCEECSBC
T ss_pred HHHHHhcCCCeeEEEECCCchHHHHHHHHHHcCCC-CCCEEEeecC
Confidence 444332 12222233333 2 367778889998 8888887543
No 242
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} SCOP: c.86.1.0
Probab=29.87 E-value=1e+02 Score=32.70 Aligned_cols=82 Identities=21% Similarity=0.235 Sum_probs=57.2
Q ss_pred hhHHHHHHHHHHCCCeEEEEe--cCCchh-----hHHHHHHHhh------------CC---------CCCceeEecCCCC
Q psy4654 403 AGAVDIVRHWQELGYLIIYIT--GRPDMQ-----QGRVLSWLSQ------------HN---------FPHGLVSFADGLS 454 (559)
Q Consensus 403 ~GA~elv~~l~~~GY~IIYLT--aRp~~~-----~~~T~~WL~q------------hg---------lP~G~L~lr~g~~ 454 (559)
..+...++.+.++|-++|.+| |||.+. -+-..+.|.+ -| +..|.++|.++.+
T Consensus 43 ~aalpTI~~ll~~GakVil~SHlGRP~g~~~~~SL~pva~~L~~lLg~~V~f~~d~~G~~~~~~v~~l~~G~VlLLEN~R 122 (403)
T 3q3v_A 43 RSAIPTIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIVMAKDVIGEDAKTKAMNLKAGEILLLENLR 122 (403)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCSCCSSCCGGGCSHHHHHHHHHHHTSCCEECSSSSSHHHHHHHHHCCTTCEEECSCGG
T ss_pred HHHHHHHHHHHHCCCEEEEEecCCCCCCCCcccCHHHHHHHHHHHHCCCeEecCCCCCcHHHHHHhcCCCCcEEEEeecc
Confidence 347889999999999999998 888763 1222334432 13 6788999998865
Q ss_pred CChhh--HHHHHHHHHhhccCCcEEEEeCCcc
Q psy4654 455 PGFLG--HKASYLKSLIQDHGVVIHAAYGSNK 484 (559)
Q Consensus 455 ~dp~~--~K~~~L~~L~~~~~~~i~aafGN~~ 484 (559)
-.+++ ...++.+.|..-+++++-++||.+.
T Consensus 123 F~~~E~~nd~~fa~~LA~l~DvyVNDAFgtaH 154 (403)
T 3q3v_A 123 FEKGETKNDENLAKELASMVQVYINDAFGVCH 154 (403)
T ss_dssp GSTTGGGTCHHHHHHHHHTCSEEEECCGGGTT
T ss_pred cccchhhcHHHHHHHHHhhCCEEEECcchhhh
Confidence 44432 2346777887778899999999853
No 243
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1 PDB: 3b2b_A* 3uwd_A*
Probab=29.67 E-value=70 Score=33.83 Aligned_cols=82 Identities=20% Similarity=0.246 Sum_probs=58.6
Q ss_pred hhHHHHHHHHHHCCCeEEEEe--cCCchhh------HHHHHHHhh---------------------CCCCCceeEecCCC
Q psy4654 403 AGAVDIVRHWQELGYLIIYIT--GRPDMQQ------GRVLSWLSQ---------------------HNFPHGLVSFADGL 453 (559)
Q Consensus 403 ~GA~elv~~l~~~GY~IIYLT--aRp~~~~------~~T~~WL~q---------------------hglP~G~L~lr~g~ 453 (559)
..+...++.+-++|-++|.+| |||.+.. +-..++|.+ ..+..|.+++.++.
T Consensus 38 ~aalpTI~~ll~~gakvil~SHlGRPkg~~~~~~SL~pva~~L~~lLg~~V~f~~d~~G~~~~~~v~~l~~G~VlLLEN~ 117 (394)
T 1php_A 38 RAALPTIRYLIEHGAKVILASHLGRPKGKVVEELRLDAVAKRLGELLERPVAKTNEAVGDEVKAAVDRLNEGDVLLLENV 117 (394)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCSCCCSSCCGGGCSHHHHHHHHHHHTSCCEECSCSSSHHHHHHHHTCCTTCEEECCCG
T ss_pred HHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCccCHHHHHHHHHHHHCCCceECCCcCCHHHHHHHhcCCCCeEEEEccc
Confidence 347889999999999999988 7886521 222334432 24788999999987
Q ss_pred CCChhhHH--HHHHHHHhhccCCcEEEEeCCcc
Q psy4654 454 SPGFLGHK--ASYLKSLIQDHGVVIHAAYGSNK 484 (559)
Q Consensus 454 ~~dp~~~K--~~~L~~L~~~~~~~i~aafGN~~ 484 (559)
+-.+++-| .++.+.|..-+++++-++||.+.
T Consensus 118 RF~~~E~~nd~~fa~~LA~l~DvyVNDAFgtaH 150 (394)
T 1php_A 118 RFYPGEEKNDPELAKAFAELADLYVNDAFGAAH 150 (394)
T ss_dssp GGSHHHHHTCHHHHHHHHTTCSEEEECCGGGTT
T ss_pred CCCcchhhCCHHHHHHHHhhCCEEEeccccccc
Confidence 66554432 35777887778899999999853
No 244
>2wzb_A Phosphoglycerate kinase 1; hereditary hemolytic anemia, transferase, phosphoprotein, KI glycolysis, nucleotide-binding; HET: ADP 3PG; 1.47A {Homo sapiens} PDB: 2wzc_A* 2x13_A* 2x15_A* 2xe6_A* 2xe7_A* 2xe8_A* 2ybe_A* 3c3b_A* 2zgv_A* 3c3a_A* 3c39_A* 3c3c_A* 2wzd_A* 2x14_A* 2y3i_A* 1vjd_A* 1vjc_A* 1kf0_A* 1hdi_A* 2p9t_A* ...
Probab=28.05 E-value=65 Score=34.29 Aligned_cols=94 Identities=23% Similarity=0.270 Sum_probs=62.9
Q ss_pred hhHHHHHHHHHHCCCe-EEEEe--cCCchhhH-------HHHHHHhh---------------------CCCCCceeEecC
Q psy4654 403 AGAVDIVRHWQELGYL-IIYIT--GRPDMQQG-------RVLSWLSQ---------------------HNFPHGLVSFAD 451 (559)
Q Consensus 403 ~GA~elv~~l~~~GY~-IIYLT--aRp~~~~~-------~T~~WL~q---------------------hglP~G~L~lr~ 451 (559)
..+...++.+-++|-+ +|.+| |||.+..+ -..++|.+ ..+..|.++|.+
T Consensus 40 ~aalpTIk~ll~~gak~Vil~SHlGRPkg~~~~~~~SL~pva~~L~~lLg~~V~f~~d~~G~~~~~~v~~l~~G~VlLLE 119 (416)
T 2wzb_A 40 KAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLE 119 (416)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSCCTTSCCHHHHCSHHHHHHHHHHHTSCCEECSCSSSHHHHHHHHSCCTTEEEECC
T ss_pred HHHHHHHHHHHHCCCCEEEEEecCCCCCCCCCccccCHHHHHHHHHHHHCCCCeeCCccCCHHHHHHHhcCCCCcEEEec
Confidence 3478899999999999 88888 78876522 12334432 247889999988
Q ss_pred CCCCChhhH-----------HH--H----HHHHHhhccCCcEEEEeCCccchhHHHhcCCCCC
Q psy4654 452 GLSPGFLGH-----------KA--S----YLKSLIQDHGVVIHAAYGSNKDVSVYTSVGLKPR 497 (559)
Q Consensus 452 g~~~dp~~~-----------K~--~----~L~~L~~~~~~~i~aafGN~~DV~aYr~vGI~~~ 497 (559)
+.+-.+++- |- + +.+.|..-+++++-++||.+.-..+-. +||+..
T Consensus 120 N~RF~~~E~~~~~~~~~~~~knd~e~~~~fa~~LA~l~DvyVNDAFgtaHRahaS~-~gi~~~ 181 (416)
T 2wzb_A 120 NLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSM-VGVNLP 181 (416)
T ss_dssp CGGGSHHHHTCC----------CHHHHHHHHHHHHHTCSEEEECCGGGTTCCCHHH-HCCCCS
T ss_pred ccccchhhcccccccccccccCCHHHHHHHHHHHHhhCCEEEecccccchhhccch-hhhhhc
Confidence 754444332 11 1 788887778999999999964333333 566654
No 245
>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} SCOP: c.86.1.1
Probab=27.51 E-value=79 Score=33.44 Aligned_cols=82 Identities=20% Similarity=0.231 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHCCCeEEEEe--cCCchhh------HHHHHHHhh---------------------CCCCCceeEecCCC
Q psy4654 403 AGAVDIVRHWQELGYLIIYIT--GRPDMQQ------GRVLSWLSQ---------------------HNFPHGLVSFADGL 453 (559)
Q Consensus 403 ~GA~elv~~l~~~GY~IIYLT--aRp~~~~------~~T~~WL~q---------------------hglP~G~L~lr~g~ 453 (559)
..+...++.+.++|-++|.+| |||.+.. +-..++|.+ ..+..|.+++.++.
T Consensus 37 ~a~lpTI~~ll~~gakvil~SHlGRPkg~~~~~~SL~pva~~L~~lLg~~V~f~~d~~G~~~~~~v~~l~~G~VlLLEN~ 116 (398)
T 1vpe_A 37 RAALPTIKYALEQGAKVILLSHLGRPKGEPSPEFSLAPVAKRLSELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENT 116 (398)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCSCCCSSCCGGGCSHHHHHHHHHHHTSCCEEESCSSSHHHHHHHHTCCTTEEEEECCG
T ss_pred HHHHHHHHHHHHCCCEEEEEccCCCCCCCcCCccCHHHHHHHHHHHHCCCceeCCCCCCHHHHHHHhcCCCCeEEEEccc
Confidence 347888999999999999988 7886521 223334432 24788999999987
Q ss_pred CCChhhHH--HHHHHHHhhccCCcEEEEeCCcc
Q psy4654 454 SPGFLGHK--ASYLKSLIQDHGVVIHAAYGSNK 484 (559)
Q Consensus 454 ~~dp~~~K--~~~L~~L~~~~~~~i~aafGN~~ 484 (559)
+-.+++-| .++.+.|..-+++++-++||.+.
T Consensus 117 RF~~~E~~nd~~fa~~LA~l~DvyVNDAFgtaH 149 (398)
T 1vpe_A 117 RFHPGETKNDPELAKFWASLADIHVNDAFGTAH 149 (398)
T ss_dssp GGSTHHHHTCHHHHHHHHTTCSEEEECCGGGTT
T ss_pred CCCcchhcCCHHHHHHHHhhCCEEEeccccccc
Confidence 65554432 35777887778899999999853
No 246
>3oz7_A Phosphoglycerate kinase; transferase, ATP binding, glycolysi malaria parasite; 2.70A {Plasmodium falciparum} SCOP: c.86.1.1 PDB: 1ltk_A* 3oza_A
Probab=26.71 E-value=71 Score=34.01 Aligned_cols=102 Identities=22% Similarity=0.291 Sum_probs=66.4
Q ss_pred ccceeccccccCCCcccchhHHHHHHHHHHCCCe-EEEEe--cCCchhh------HHHHHHHhh----------------
Q psy4654 385 DGSFTASVSVTGRDPKVRAGAVDIVRHWQELGYL-IIYIT--GRPDMQQ------GRVLSWLSQ---------------- 439 (559)
Q Consensus 385 DGTlt~sd~~~g~D~~~~~GA~elv~~l~~~GY~-IIYLT--aRp~~~~------~~T~~WL~q---------------- 439 (559)
||.+|+..- ...+...++.+.++|-+ +|.+| |||.+.. +-..+.|.+
T Consensus 33 ~g~Itdd~R--------I~aalpTI~~ll~~gak~Vil~SHlGRP~g~~~~~~SL~pva~~L~~lLg~~V~f~~d~~G~~ 104 (417)
T 3oz7_A 33 NGIIKDTNR--------ITATLPTINHLKKEGASKIILISHCGRPDGLRNEKYTLKPVAETLKGLLGEEVLFLNDCVGKE 104 (417)
T ss_dssp TTEESCCHH--------HHTTHHHHHHHHHHTCSEEEEECCCSCCTTSCCGGGCSHHHHHHHHHHHTSCCEEESCSSSHH
T ss_pred CCcCCChHH--------HHHHHHHHHHHHHCCCCEEEEEecCCCCCCCCCCccCHHHHHHHHHHHhCCCcEECCCCCCHH
Confidence 566665432 22357788899899999 88888 6887631 222333321
Q ss_pred -----CCCCCceeEecCCCCCChhhH-----------------HHHHHHHHhhccCCcEEEEeCCccchhHHHhcCCC
Q psy4654 440 -----HNFPHGLVSFADGLSPGFLGH-----------------KASYLKSLIQDHGVVIHAAYGSNKDVSVYTSVGLK 495 (559)
Q Consensus 440 -----hglP~G~L~lr~g~~~dp~~~-----------------K~~~L~~L~~~~~~~i~aafGN~~DV~aYr~vGI~ 495 (559)
..+..|.++|.++.+-.+++- ..++.+.|..-+++++-++||.+.-..+-. +||+
T Consensus 105 ~~~~v~~l~~G~VlLLEN~RF~~eE~~~~~~~~~~~~k~~~~n~~~fa~~LA~l~DvyVNDAFgtaHRahaS~-~Gi~ 181 (417)
T 3oz7_A 105 VEDKINAAKENSVILLENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFINDAFGTAHRAHSSM-VGVK 181 (417)
T ss_dssp HHHHHHHSCTTEEEEECCGGGSHHHHSEEECTTSCEEECCHHHHHHHHHHHHTTCSEEEECCGGGTTSCCHHH-HCCC
T ss_pred HHHHHhcCCCCcEEEEccccccccccccccccccccccCChhhhHHHHHHHHhhCCEEEECcchhhhhccCcc-cccc
Confidence 247789999998866444333 357778887778899999999964333222 4666
No 247
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=26.65 E-value=21 Score=37.18 Aligned_cols=20 Identities=20% Similarity=0.218 Sum_probs=16.7
Q ss_pred eCCCCeeEEEeeccceeccc
Q psy4654 373 VPPRTEVVVFSVDGSFTASV 392 (559)
Q Consensus 373 ~~~~~k~VIfDIDGTlt~sd 392 (559)
.|...+++|||-|||+...|
T Consensus 36 ~~~~~~~AVFD~DgTl~~~D 55 (385)
T 4gxt_A 36 NPDNKPFAVFDWDNTSIIGD 55 (385)
T ss_dssp CTTSEEEEEECCTTTTEESC
T ss_pred CCCCCCEEEEcCCCCeeccc
Confidence 56677899999999998654
No 248
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=26.40 E-value=17 Score=40.27 Aligned_cols=83 Identities=22% Similarity=0.249 Sum_probs=55.9
Q ss_pred chhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCceeE-------ecCCCCCChhhHHHHHHHHHhhccCC
Q psy4654 402 RAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHGLVS-------FADGLSPGFLGHKASYLKSLIQDHGV 474 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G~L~-------lr~g~~~dp~~~K~~~L~~L~~~~~~ 474 (559)
.++++++.+.|.+.||+|+ -| .-|.++|+++|+|-..|. |.+| +-+.++=|+. .|
T Consensus 15 K~~iv~lAk~L~~lGf~I~-AT-------gGTAk~L~e~GI~v~~V~k~TgfPE~l~G-RVKTLHP~ih--------gG- 76 (593)
T 1g8m_A 15 KAGLVEFARSLNALGLGLI-AS-------GGTATALRDAGLPVRDVSDLTGFPEMLGG-RVKTLHPAVH--------AG- 76 (593)
T ss_dssp CTTHHHHHHHHHHTTCEEE-EC-------HHHHHHHHHTTCCCEEHHHHHSCCCBGGG-TBSSCSHHHH--------HH-
T ss_pred cHhHHHHHHHHHHCCCEEE-Ec-------hHHHHHHHHCCCeEEEeecccCCchhhcC-CccccCchhh--------hh-
Confidence 4679999999999999987 34 489999999999876653 2222 1111111110 01
Q ss_pred cEEEEeCCccchhHHHhcCCCCCcEEEEcC
Q psy4654 475 VIHAAYGSNKDVSVYTSVGLKPRSIYIVGK 504 (559)
Q Consensus 475 ~i~aafGN~~DV~aYr~vGI~~~~If~i~~ 504 (559)
|.+ =+++.+++...+.||++-.+.+||=
T Consensus 77 -iLa-r~~~~h~~~l~~~~I~~iDlVvvNL 104 (593)
T 1g8m_A 77 -ILA-RNIPEDNADMNKQDFSLVRVVVCNL 104 (593)
T ss_dssp -HHC-CSSHHHHHHHHHTTCCCEEEEEEEC
T ss_pred -hcc-CCCHHHHHHHHHcCCCceeEEEEec
Confidence 223 3556788888888888888888884
No 249
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=25.97 E-value=1.4e+02 Score=28.19 Aligned_cols=35 Identities=23% Similarity=0.258 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhccCC--cEEEEeCC-ccchhHHHhcCC
Q psy4654 460 HKASYLKSLIQDHGV--VIHAAYGS-NKDVSVYTSVGL 494 (559)
Q Consensus 460 ~K~~~L~~L~~~~~~--~i~aafGN-~~DV~aYr~vGI 494 (559)
-|...|+.+++..++ .=..+||| .+|+.+.+.+|+
T Consensus 202 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~ 239 (290)
T 3dnp_A 202 SKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGL 239 (290)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCC
Confidence 477778777664454 23688999 699999999996
No 250
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=24.63 E-value=1.4e+02 Score=28.08 Aligned_cols=87 Identities=17% Similarity=0.135 Sum_probs=44.2
Q ss_pred eEEEEe-cCCc--hhhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHHHHHhhc-cCCc---EEEEeCC-c-cc
Q psy4654 418 LIIYIT-GRPD--MQQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYLKSLIQD-HGVV---IHAAYGS-N-KD 485 (559)
Q Consensus 418 ~IIYLT-aRp~--~~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L~~L~~~-~~~~---i~aafGN-~-~D 485 (559)
+|.++. +.+. ...++. ++.|+++|+|.-.+........+++.-. +.+++++.. .++. |++.-+. + -.
T Consensus 134 ~i~~~~~~~~~~~~~~~R~~Gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~a~~i~~~nD~~A~g~ 212 (306)
T 8abp_A 134 ESAVMAITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKSNDIPGAF-DAANSMLVQHPEVKHWLIVGMNDSTVLGG 212 (306)
T ss_dssp GEEEEEEECTTSHHHHHHHHHHHHHHHHHTCCGGGEEEEECSSSSHHHHH-HHHHHHHTTCTTCSEEEEECSSHHHHHHH
T ss_pred ceEEEEecCCCChHHHHHHHHHHHHHHhcCCCCcEEEeeccCCCChHHHH-HHHHHHHHhCCCCceEEEEeCCcHHHHHH
Confidence 566664 4442 333444 4556678888554443211122332322 234444332 2222 3332222 2 46
Q ss_pred hhHHHhcCCCCCcEEEEcCC
Q psy4654 486 VSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 486 V~aYr~vGI~~~~If~i~~~ 505 (559)
+.+.++.|+...+|.+||=.
T Consensus 213 ~~al~~~g~~v~di~vvG~D 232 (306)
T 8abp_A 213 VRATEGQGFKAADIIGIGIN 232 (306)
T ss_dssp HHHHHHTTCCGGGEEEEEES
T ss_pred HHHHHHcCCCCCceEEEEeC
Confidence 77888899987888888743
No 251
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=24.63 E-value=3.6e+02 Score=25.15 Aligned_cols=105 Identities=11% Similarity=0.127 Sum_probs=56.5
Q ss_pred cCCCcccchhHHHHHHHHHH------------CCC-eEEEEecCCc--hhhHHH---HHHHhhCCCCCceeEecCCCCCC
Q psy4654 395 TGRDPKVRAGAVDIVRHWQE------------LGY-LIIYITGRPD--MQQGRV---LSWLSQHNFPHGLVSFADGLSPG 456 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~------------~GY-~IIYLTaRp~--~~~~~T---~~WL~qhglP~G~L~lr~g~~~d 456 (559)
++.| -..++..+.+++.+ +|+ +|.++++.+. ...++. ++.|+++|++........+ ..+
T Consensus 108 V~~d--~~~~g~~~~~~L~~~~~~~~~~~~~g~g~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~-~~~ 184 (309)
T 2fvy_A 108 VGTD--SKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTA-MWD 184 (309)
T ss_dssp EECC--HHHHHHHHHHHHHHHHHHCGGGCTTCSSSEEEEEEECSTTCHHHHHHHHHHHHHHHHTTCCEEEEEEEEC-TTC
T ss_pred EecC--HHHHHHHHHHHHHHHHhhcccccccCCCceEEEEEEcCCCCccHHHHHHHHHHHHHhcCCceEEEEEecC-CCC
Confidence 4555 24556667777777 788 6889998754 233333 4667788987655433221 122
Q ss_pred hhhHHHHHHHHHhhcc---CCcEEEEeCC--c-cchhHHHhcCCCCCcEEEEcCC
Q psy4654 457 FLGHKASYLKSLIQDH---GVVIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 457 p~~~K~~~L~~L~~~~---~~~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~~ 505 (559)
++. =...+++++... ...-+.+..+ + -.+.+.++.|- ..|-+||=.
T Consensus 185 ~~~-~~~~~~~~l~~~~~~~~~ai~~~~d~~a~g~~~al~~~g~--~di~vig~d 236 (309)
T 2fvy_A 185 TAQ-AKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAHNK--SSIPVFGVD 236 (309)
T ss_dssp HHH-HHHHHHHHHTSTTGGGCCEEEESSHHHHHHHHHHHHHTTC--TTSCEECSB
T ss_pred HHH-HHHHHHHHHHhCCCCCccEEEECCchhHHHHHHHHHHcCC--CCceEEecC
Confidence 221 123455554421 2222233333 2 36677888892 256666643
No 252
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=24.09 E-value=1.2e+02 Score=25.87 Aligned_cols=41 Identities=7% Similarity=0.118 Sum_probs=33.3
Q ss_pred chhHHHHHHHHHHCCCeEEEEecCCchhhHHHHHHHhhCCCCCc
Q psy4654 402 RAGAVDIVRHWQELGYLIIYITGRPDMQQGRVLSWLSQHNFPHG 445 (559)
Q Consensus 402 ~~GA~elv~~l~~~GY~IIYLTaRp~~~~~~T~~WL~qhglP~G 445 (559)
.+...+++.++.++|..||-+|.- -.+..++|++++++++-
T Consensus 55 ~~~l~~~~~~~~~~~~~vv~vs~d---~~~~~~~~~~~~~~~~~ 95 (163)
T 3gkn_A 55 GLDFNALLPEFDKAGAKILGVSRD---SVKSHDNFCAKQGFAFP 95 (163)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHCCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHhCCCce
Confidence 355778888999999999999873 55677899999988765
No 253
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=24.00 E-value=3.9e+02 Score=25.14 Aligned_cols=105 Identities=11% Similarity=0.030 Sum_probs=55.6
Q ss_pred cCCCcccchhHHHHHHHHHHCC---C-eEEEEecCCc--hhhHHH---HHHHhhCCCCCceeEecCCCCCChhhHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELG---Y-LIIYITGRPD--MQQGRV---LSWLSQHNFPHGLVSFADGLSPGFLGHKASYL 465 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~G---Y-~IIYLTaRp~--~~~~~T---~~WL~qhglP~G~L~lr~g~~~dp~~~K~~~L 465 (559)
++.| -..++..+.++|.++| + +|.|+++.+. ...++. ++.|+++|+ ...+....+ ..+.+.- .+.+
T Consensus 105 V~~D--~~~~g~~a~~~L~~~g~g~~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~-~~~~~~~~~-~~~~~~~-~~~~ 179 (306)
T 2vk2_A 105 VTAD--NILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIKNAPN-IKIIRSQSG-DFTRSKG-KEVM 179 (306)
T ss_dssp EECC--HHHHHHHHHHHHHHHHTTSCEEEEEEECSTTCHHHHHHHHHHHHHTTTCTT-EEEEEEEEC-TTCHHHH-HHHH
T ss_pred EecC--HHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCChhHHHHHHHHHHHHhhCCC-eEEEEeccC-CCcHHHH-HHHH
Confidence 4455 3566777888888877 6 7999998754 223343 445566665 122221111 1122111 2234
Q ss_pred HHHhhc----cCCcEEEEeCC--c-cchhHHHhcCCC-CCcEEEEcC
Q psy4654 466 KSLIQD----HGVVIHAAYGS--N-KDVSVYTSVGLK-PRSIYIVGK 504 (559)
Q Consensus 466 ~~L~~~----~~~~i~aafGN--~-~DV~aYr~vGI~-~~~If~i~~ 504 (559)
++++.. ....-+.+..+ + -.+.+.++.|+. |..|-+||=
T Consensus 180 ~~ll~~~~~~~~~~ai~~~nd~~A~g~~~al~~~G~~vP~di~vig~ 226 (306)
T 2vk2_A 180 ESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGKDILTGSI 226 (306)
T ss_dssp HHHHHHTTTTTTCCEEEESSHHHHHHHHHHHHHTTCCBTTTBEEEEE
T ss_pred HHHHHhCCCCCCeeEEEECCchHHHHHHHHHHHcCCCCCCCeEEEee
Confidence 444432 12333333333 2 366778889986 567777763
No 254
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A*
Probab=23.85 E-value=1e+02 Score=32.86 Aligned_cols=94 Identities=17% Similarity=0.202 Sum_probs=62.3
Q ss_pred hhHHHHHHHHHHCCCe-EEEEe--cCCchhh------HHHHHHHhh---------------------CCCCCceeEecCC
Q psy4654 403 AGAVDIVRHWQELGYL-IIYIT--GRPDMQQ------GRVLSWLSQ---------------------HNFPHGLVSFADG 452 (559)
Q Consensus 403 ~GA~elv~~l~~~GY~-IIYLT--aRp~~~~------~~T~~WL~q---------------------hglP~G~L~lr~g 452 (559)
..+...++.+-++|-+ +|.+| |||.+.. +-..++|.+ ..+..|.++|.++
T Consensus 40 ~aalpTIk~ll~~gak~Vil~SHlGRP~g~~~~~~SL~pva~~L~~lLg~~V~f~~d~~G~~~~~~v~~l~~G~VlLLEN 119 (415)
T 1qpg_A 40 VAALPTIKYVLEHHPRYVVLASHLGQPNGERNEKYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLEN 119 (415)
T ss_dssp HHHHHHHHHHHTTCCSEEEEECCCSCCCSSCCGGGCSHHHHHHHHHHHTSCCEEESCSSSHHHHHHHHTCCTTEEEEECC
T ss_pred HHHHHHHHHHHHCCCCEEEEEecCCCCCCCCCCccCHHHHHHHHHHHHCCCceeCCCcCCHHHHHHHhcCCCCeEEEecc
Confidence 4478899999999999 88887 7886531 222334432 2478899999887
Q ss_pred CCCChhhH----------------HHHHHHHHhhccCCcEEEEeCCccchhHHHhcCCCCC
Q psy4654 453 LSPGFLGH----------------KASYLKSLIQDHGVVIHAAYGSNKDVSVYTSVGLKPR 497 (559)
Q Consensus 453 ~~~dp~~~----------------K~~~L~~L~~~~~~~i~aafGN~~DV~aYr~vGI~~~ 497 (559)
.+-.+++- ...+.+.|..-+++++-++||.+.-..+-. +||+..
T Consensus 120 ~RF~~~E~g~~~~~~~~~knd~~~~~~fa~~LA~l~DvyVNDAFgtaHRahaS~-~gi~~~ 179 (415)
T 1qpg_A 120 LRYHIEEEGSRKVDGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSM-VGFDLP 179 (415)
T ss_dssp GGGSHHHHTEEEETTEEEECCHHHHHHHHHHHHHTCSEEEECCGGGTTSCCHHH-HCCCCS
T ss_pred CccChhhccccccccchhccCHHHHHHHHHHHHhhCCEEEecchhhchhhcCcc-cchhhc
Confidence 54433322 111788887778999999999964333322 566653
No 255
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=23.64 E-value=3.9e+02 Score=24.81 Aligned_cols=104 Identities=11% Similarity=-0.014 Sum_probs=58.6
Q ss_pred cCCCcccchhHHHHHHHHHHCC-----C-eEEEEecCCch--hhHHHHHH---HhhCCCCCceeEecCCCCCChhhHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQELG-----Y-LIIYITGRPDM--QQGRVLSW---LSQHNFPHGLVSFADGLSPGFLGHKAS 463 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~~G-----Y-~IIYLTaRp~~--~~~~T~~W---L~qhglP~G~L~lr~g~~~dp~~~K~~ 463 (559)
++.|. ..+...+.+++.++| | +|.|+++.+.. ..++...| |+++|++....... ..+++.-. +
T Consensus 111 V~~D~--~~~g~~a~~~l~~~g~~~~~~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~---~~~~~~~~-~ 184 (304)
T 3o1i_D 111 VGVDW--YWMGYEAGKYLAERHPKGSGKTNIALLLGPRTRGGTKPVTTGFYEAIKNSDIHIVDSFWA---DNDKELQR-N 184 (304)
T ss_dssp CCCCH--HHHHHHHHHHHHTTSBTTTCCEEEEEECCCC-----CHHHHHHHHTTTTBTEEEEECCCC---CSCHHHHH-H
T ss_pred EecCH--HHHHHHHHHHHHHhcccCCCCCEEEEEECCCCcchHHHHHHHHHHHHhcCCCEEEEeecC---CCcHHHHH-H
Confidence 56663 567788899999999 7 68899887542 33444444 45666654433211 22332222 2
Q ss_pred HHHHHhhccCCcEEEEeCC-c-cchhHHHhcCCCCCcEEEEcCC
Q psy4654 464 YLKSLIQDHGVVIHAAYGS-N-KDVSVYTSVGLKPRSIYIVGKV 505 (559)
Q Consensus 464 ~L~~L~~~~~~~i~aafGN-~-~DV~aYr~vGI~~~~If~i~~~ 505 (559)
.+++++......-+++-+. + -.+.+.++.|+. .+|.+||-.
T Consensus 185 ~~~~~l~~~~~~ai~~~d~~a~g~~~al~~~g~~-~di~vvg~d 227 (304)
T 3o1i_D 185 LVQRVIDMGNIDYIVGSAVAIEAAISELRSADKT-HDIGLVSVY 227 (304)
T ss_dssp HHHHHHHHSCCSEEEECHHHHHHHHHHHTTTTCG-GGSEEBCSS
T ss_pred HHHHHHcCCCCCEEEecCcchHHHHHHHHhcCCC-CCeEEEEeC
Confidence 2333323223323333222 2 466788889998 889998864
No 256
>4fey_A Phosphoglycerate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: ADP; 2.30A {Francisella tularensis subsp} PDB: 4ehj_A
Probab=23.55 E-value=74 Score=33.62 Aligned_cols=80 Identities=16% Similarity=0.222 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHCCCeEEEEe--cCC-chhh------HHHHHHHhh---------------CCCCCceeEecCCCCCChhh
Q psy4654 404 GAVDIVRHWQELGYLIIYIT--GRP-DMQQ------GRVLSWLSQ---------------HNFPHGLVSFADGLSPGFLG 459 (559)
Q Consensus 404 GA~elv~~l~~~GY~IIYLT--aRp-~~~~------~~T~~WL~q---------------hglP~G~L~lr~g~~~dp~~ 459 (559)
.+...++.+.++|-++|.+| ||| ++.. +-..+.|.+ -.+..|.+++.++.+-.+++
T Consensus 42 a~lpTI~~ll~~gakVil~SHlGRP~kg~~~~~~SL~pva~~L~~lLg~~V~f~~d~~~~v~l~~G~VlLLEN~RF~~~E 121 (395)
T 4fey_A 42 AAIPTIQYILDQGGAVILMSHLGRPTEGEYDSQFSLEPVAKALSEIINKPVKFAKDWLDGVDVKAGEIVMCENVRFNSGE 121 (395)
T ss_dssp HTHHHHHHHHHHTCEEEEECCCSCCCTTSCCGGGCSHHHHHHHHHHHCSCEEEESSTTTCCCCCTTCEEEECCGGGSTTT
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCCCCCCcCcccCHHHHHHHHHHHHCCCcEECcccccccCCCCCcEEEEeecccCchh
Confidence 36788899999999999887 788 4421 222334432 15678899998875443322
Q ss_pred --HHHHHHHHHhhccCCcEEEEeCCc
Q psy4654 460 --HKASYLKSLIQDHGVVIHAAYGSN 483 (559)
Q Consensus 460 --~K~~~L~~L~~~~~~~i~aafGN~ 483 (559)
...++.+.|..-+++++-++||.+
T Consensus 122 ~~nd~~fa~~LA~l~DvyVNDAFgta 147 (395)
T 4fey_A 122 KKSTDDLSKKIASLGDVFVMDAFATA 147 (395)
T ss_dssp TTTCHHHHHHHHHTCSEEEECCGGGT
T ss_pred hhcHHHHHHHHHhhCCEEEECcchhh
Confidence 234677788777889999999984
No 257
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=23.38 E-value=83 Score=31.32 Aligned_cols=79 Identities=15% Similarity=0.112 Sum_probs=41.8
Q ss_pred CCceeEEEeeecCCCcceeeeEeEEEEecCCCCcEEEE-EEEEeCCCccEEEecCCCCcCCCCccceEEEEcCCceeEEE
Q psy4654 290 GLPQTLVARFMYGPFDMFTLTVDVHLIKEPPSGEWVLM-STEVTDKTGRVSYTLPEDHKLSYGMYPVKMVVRGDHTSVDF 368 (559)
Q Consensus 290 ~~~~~~~~~F~yg~~d~~~l~vdi~~~~~~~~g~w~~~-~t~~t~s~gri~~~~p~~~~L~~G~y~vkmvV~gd~t~~~~ 368 (559)
...+.++=++..++.. +|+|... -..|..- .=....++|.-+.+++ |++|.|..||+|.|.
T Consensus 167 ~~k~~v~f~~~~~~~~------~V~v~Gs--F~~W~~~~~l~k~~~~g~~~~~~~----L~~G~y~YkFiVDG~------ 228 (294)
T 3nme_A 167 LKRKTVTLTLKDKGFS------RVEISGL--DIGWGQRIPLTLGKGTGFWILKRE----LPEGQFEYKYIIDGE------ 228 (294)
T ss_dssp CCCEEEEEEEECSSCS------CEEEEET--TTEEEEEEECEECTTTCEEEEEEE----ECSEEEEEEEEETTE------
T ss_pred cccccceeeeccCCCC------EEEEEEe--ccCCCCcccceEcCCCCEEEEEEE----CCCceEEEEEEECCE------
Confidence 3344444444443332 3444332 3458622 1122224666566653 889999999999984
Q ss_pred EEEeeCCCCeeEEEeeccce
Q psy4654 369 YLAVVPPRTEVVVFSVDGSF 388 (559)
Q Consensus 369 ~i~v~~~~~k~VIfDIDGTl 388 (559)
.+.++..+.+.-|-+|++
T Consensus 229 --w~~d~~~~~~~~d~~G~~ 246 (294)
T 3nme_A 229 --WTHNEAEPFIGPNKDGHT 246 (294)
T ss_dssp --EECCTTSCEECSCTTSCC
T ss_pred --EeeCCCCCeeeECCCCCE
Confidence 223333344445555654
No 258
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=22.73 E-value=4.1e+02 Score=24.57 Aligned_cols=99 Identities=14% Similarity=0.008 Sum_probs=53.5
Q ss_pred chhHHHHHHHHHHC------CCe---EEEEecCCc--hhhHHH---HHHHhhC-CCCCceeEecCCCCCChhhHHHHHHH
Q psy4654 402 RAGAVDIVRHWQEL------GYL---IIYITGRPD--MQQGRV---LSWLSQH-NFPHGLVSFADGLSPGFLGHKASYLK 466 (559)
Q Consensus 402 ~~GA~elv~~l~~~------GY~---IIYLTaRp~--~~~~~T---~~WL~qh-glP~G~L~lr~g~~~dp~~~K~~~L~ 466 (559)
..++..+.+.+.++ ||+ |.++++.+. ...++. ++.|+++ |++...+... ..+++. -.+.++
T Consensus 108 ~~~~~~~~~~L~~~~g~~~~G~r~i~i~~l~g~~~~~~~~~R~~gf~~~l~~~~g~~~~~~~~~---~~~~~~-~~~~~~ 183 (290)
T 2fn9_A 108 YYGGVLAGEYFVKFLKEKYPDAKEIPYAELLGILSAQPTWDRSNGFHSVVDQYPEFKMVAQQSA---EFDRDT-AYKVTE 183 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSCSCEEEEEEECCTTCHHHHHHHHHHHHHHTTSTTEEEEEEEEC---TTCHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCcccceeEEEEEcCCCCchHHHHHHHHHHHHHhCCCCEEEEeccC---CCCHHH-HHHHHH
Confidence 45667777888887 775 889998654 223333 3455666 6543222221 122221 123455
Q ss_pred HHhhc-cCCcEEEEeCC--c-cchhHHHhcCCCCCcEEEEcCCC
Q psy4654 467 SLIQD-HGVVIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGKVS 506 (559)
Q Consensus 467 ~L~~~-~~~~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~~~ 506 (559)
++++. ....-+.+..+ + -.+.+.++.|+ ..|.+||=.+
T Consensus 184 ~ll~~~~~~~ai~~~~d~~a~g~~~al~~~g~--~dv~vig~d~ 225 (290)
T 2fn9_A 184 QILQAHPEIKAIWCGNDAMALGAMKACEAAGR--TDIYIFGFDG 225 (290)
T ss_dssp HHHHHCTTCCEEEESSHHHHHHHHHHHHHTTC--TTCEEECCBC
T ss_pred HHHHhCCCCcEEEECCchHHHHHHHHHHHCCC--CCeEEEEeCC
Confidence 55432 12333333333 2 35677788999 6788887543
No 259
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=21.79 E-value=1.5e+02 Score=26.34 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=30.0
Q ss_pred hhHHHHHHHHHHCCC-eEEEEecCCchhhHHHHHHHhhCCCC
Q psy4654 403 AGAVDIVRHWQELGY-LIIYITGRPDMQQGRVLSWLSQHNFP 443 (559)
Q Consensus 403 ~GA~elv~~l~~~GY-~IIYLTaRp~~~~~~T~~WL~qhglP 443 (559)
+...+++.+++++|. .|+-||.-+ .+..++|+++++++
T Consensus 53 p~l~~~~~~~~~~gv~~vv~Is~d~---~~~~~~~~~~~~~~ 91 (167)
T 2wfc_A 53 PGYVEQAAAIHGKGVDIIACMAVND---SFVMDAWGKAHGAD 91 (167)
T ss_dssp HHHHHTHHHHHHTTCCEEEEEESSC---HHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCC---HHHHHHHHHhcCCC
Confidence 345667788889999 999998632 45678999999998
No 260
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=21.51 E-value=1.5e+02 Score=25.90 Aligned_cols=37 Identities=14% Similarity=0.169 Sum_probs=29.5
Q ss_pred hhHHHHHHHHHHCCCe-EEEEecCCchhhHHHHHHHhhCCC
Q psy4654 403 AGAVDIVRHWQELGYL-IIYITGRPDMQQGRVLSWLSQHNF 442 (559)
Q Consensus 403 ~GA~elv~~l~~~GY~-IIYLTaRp~~~~~~T~~WL~qhgl 442 (559)
+...+++++++++|.. |+-||.-+ .+..++|++++++
T Consensus 57 ~~l~~~~~~~~~~~v~~vv~Is~d~---~~~~~~~~~~~~~ 94 (162)
T 1tp9_A 57 PGFIEKAGELKSKGVTEILCISVND---PFVMKAWAKSYPE 94 (162)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSC---HHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCC---HHHHHHHHHhcCC
Confidence 4456778888889999 99998643 4567899999998
No 261
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=21.25 E-value=1.3e+02 Score=32.00 Aligned_cols=81 Identities=20% Similarity=0.188 Sum_probs=56.0
Q ss_pred hhHHHHHHHHHHCCCeEEEEe--cCCchhh----------------------HHHHHHHhh-------------------
Q psy4654 403 AGAVDIVRHWQELGYLIIYIT--GRPDMQQ----------------------GRVLSWLSQ------------------- 439 (559)
Q Consensus 403 ~GA~elv~~l~~~GY~IIYLT--aRp~~~~----------------------~~T~~WL~q------------------- 439 (559)
..+...++.+-++|-++|.+| |||.+.. +-..++|.+
T Consensus 37 ~aalpTI~~ll~~Gakvil~SHlGRPkg~~~~~~~~~~~~~~~~~~~~~~SL~pva~~Ls~lLg~~V~f~~d~~G~~~~v 116 (415)
T 16pk_A 37 RSALPTLKKVLTEGGSCVLMSHLGRPKGIPMAQAGKIRSTGGVPGFQQKATLKPVAKRLSELLLRPVTFAPDCLNAADVV 116 (415)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCSCCCCBCGGGHHHHHHTTCCTTCCGGGCSHHHHHHHHHHHTSCCEEESCTTSCHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEecCCCCCCcccccccccccccccccCCcccCHHHHHHHHHHHhCCCCeeCCccCChHHHh
Confidence 347888999999999999988 7886541 122334432
Q ss_pred CCCCCceeEecCCCCCChhhHH------HHHHHHHhhccCCcEEEEeCCc
Q psy4654 440 HNFPHGLVSFADGLSPGFLGHK------ASYLKSLIQDHGVVIHAAYGSN 483 (559)
Q Consensus 440 hglP~G~L~lr~g~~~dp~~~K------~~~L~~L~~~~~~~i~aafGN~ 483 (559)
..+..|.++|.++.+-.+++-| .++.+.|..-+++++-++||-+
T Consensus 117 ~~l~~G~VlLLEN~RF~~~E~~nd~~e~~~fa~~LA~l~DvyVNDAFgta 166 (415)
T 16pk_A 117 SKMSPGDVVLLENVRFYKEEGSKKAKDREAMAKILASYGDVYISDAFGTA 166 (415)
T ss_dssp HTCCTTCEEEECCGGGBGGGGCSSHHHHHHHHHHHHTTCSEEEEECGGGT
T ss_pred hcCCCCcEEEeccccCCcccccCCccccHHHHHHHHhhCCEEEEcccccc
Confidence 1267788999887543332211 5688888877899999999984
No 262
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=20.32 E-value=5.2e+02 Score=23.96 Aligned_cols=107 Identities=11% Similarity=0.051 Sum_probs=57.0
Q ss_pred cCCCcccchhHHHHHHHHHH-CCC--eEEEEecCCch--hhHHH---HHHHhhCCCCCceeEecC-CCCCChhhHHHHHH
Q psy4654 395 TGRDPKVRAGAVDIVRHWQE-LGY--LIIYITGRPDM--QQGRV---LSWLSQHNFPHGLVSFAD-GLSPGFLGHKASYL 465 (559)
Q Consensus 395 ~g~D~~~~~GA~elv~~l~~-~GY--~IIYLTaRp~~--~~~~T---~~WL~qhglP~G~L~lr~-g~~~dp~~~K~~~L 465 (559)
++.|. ..+...+.+++.+ .|+ +|.++++.+.. ..++. ++.|++++.. -.+.-.. ....+++.. ...+
T Consensus 105 v~~d~--~~~g~~a~~~l~~~~g~~~~i~~i~g~~~~~~~~~R~~gf~~~l~~~~~~-~~~~~~~~~~~~~~~~~-~~~~ 180 (303)
T 3d02_A 105 EIIDN--EKFAAEYVEHMAKRMGGKGGYVIYVGSLTVPQHNLWADLLVKYQKEHYPD-MHEVTRRMPVAESVDDS-RRTT 180 (303)
T ss_dssp ESSCH--HHHHHHHHHHHHHHTTTCEEEEEECSCSSCHHHHHHHHHHHHHHHHHCTT-EEESSSCBSCTTCHHHH-HHHH
T ss_pred EecCH--HHHHHHHHHHHHHHhCcCceEEEEecCCCCccHHHHHHHHHHHHHhhCCC-CEEEEeecCCCCCHHHH-HHHH
Confidence 44552 5667778888888 898 89999987532 23343 3445555421 1111100 001222222 2344
Q ss_pred HHHhhcc-CCcEEEEeCC--c-cchhHHHhcCCCCCcEEEEcCCC
Q psy4654 466 KSLIQDH-GVVIHAAYGS--N-KDVSVYTSVGLKPRSIYIVGKVS 506 (559)
Q Consensus 466 ~~L~~~~-~~~i~aafGN--~-~DV~aYr~vGI~~~~If~i~~~~ 506 (559)
++++... ...-+.+..+ + --+.+.++.|+. .+|.+||-.+
T Consensus 181 ~~~l~~~~~~~ai~~~~d~~a~g~~~al~~~g~~-~dv~vig~d~ 224 (303)
T 3d02_A 181 LDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAK-NKVAVYGMMI 224 (303)
T ss_dssp HHHHHHCTTEEEEEESSTTHHHHHHHHHHHTTCT-TTCEEEECCC
T ss_pred HHHHHhCCCCCEEEEeCCcchhHHHHHHHhcCCC-CCeEEEEeCC
Confidence 5544322 2222333333 2 467788889998 7888888654
Done!