BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4659
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P43125|RDGB_DROME Protein retinal degeneration B OS=Drosophila melanogaster GN=rdgB
PE=1 SV=2
Length = 1259
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 6/96 (6%)
Query: 20 LYGGDYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQ 79
L+GGDYV+EEDP +VS TGRGPL+E+W+ EYW VK + N S+M AYK+C+++
Sbjct: 148 LWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNMSLMTAYKICRVE 207
Query: 80 LNYWGIQSKVERFIADTGKPSGRALPRHFRRALRFA 115
YWG+Q+K+E+FI D AL + RA R A
Sbjct: 208 FRYWGMQTKLEKFIHDV------ALRKMMLRAHRQA 237
>sp|Q9BZ72|PITM2_HUMAN Membrane-associated phosphatidylinositol transfer protein 2 OS=Homo
sapiens GN=PITPNM2 PE=1 SV=1
Length = 1349
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 10/74 (13%)
Query: 24 DYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNYW 83
+Y EEDP ++ S T RGPLSENWI EY V +MCAYKLCK++ YW
Sbjct: 152 EYKTEEDPKLFQSTKTQRGPLSENWIEEYKKQVF----------PIMCAYKLCKVEFRYW 201
Query: 84 GIQSKVERFIADTG 97
G+QSK+ERFI DTG
Sbjct: 202 GMQSKIERFIHDTG 215
>sp|Q6ZPQ6|PITM2_MOUSE Membrane-associated phosphatidylinositol transfer protein 2 OS=Mus
musculus GN=Pitpnm2 PE=1 SV=2
Length = 1335
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 48/74 (64%), Gaps = 10/74 (13%)
Query: 24 DYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNYW 83
+Y EEDP ++ S T RGPLSENWI EY + +MCAYKLCK++ YW
Sbjct: 152 EYKTEEDPKLFQSVKTCRGPLSENWIQEYKKRLL----------PIMCAYKLCKVEFRYW 201
Query: 84 GIQSKVERFIADTG 97
G+QSK+ERFI DTG
Sbjct: 202 GMQSKIERFIHDTG 215
>sp|O00562|PITM1_HUMAN Membrane-associated phosphatidylinositol transfer protein 1 OS=Homo
sapiens GN=PITPNM1 PE=1 SV=4
Length = 1244
Score = 79.0 bits (193), Expect = 9e-15, Method: Composition-based stats.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 13/89 (14%)
Query: 23 GDYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNY 82
G+Y EEDP +Y S TGRGPLS++W A + P +MCAYKLCK++ Y
Sbjct: 151 GEYKAEEDPRLYHSVKTGRGPLSDDWAR---TAAQTGP--------LMCAYKLCKVEFRY 199
Query: 83 WGIQSKVERFIADTGKPSGRALPRHFRRA 111
WG+Q+K+E+FI D G R + R R+A
Sbjct: 200 WGMQAKIEQFIHDVGLR--RVMLRAHRQA 226
>sp|O35954|PITM1_MOUSE Membrane-associated phosphatidylinositol transfer protein 1 OS=Mus
musculus GN=Pitpnm1 PE=1 SV=1
Length = 1243
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 11/75 (14%)
Query: 23 GDYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNY 82
G+Y EEDP +Y S TGRGPL+++W A + P +MCAYKLCK++ Y
Sbjct: 151 GEYKAEEDPRLYRSAKTGRGPLADDWAR---TAAQTGP--------LMCAYKLCKVEFRY 199
Query: 83 WGIQSKVERFIADTG 97
WG+Q+K+E+FI D G
Sbjct: 200 WGMQAKIEQFIHDVG 214
>sp|Q5U2N3|PITM1_RAT Membrane-associated phosphatidylinositol transfer protein 1
OS=Rattus norvegicus GN=Pitpnm1 PE=2 SV=1
Length = 1242
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 11/75 (14%)
Query: 23 GDYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNY 82
G+Y EEDP +Y S TGRGPL+++W A + P +MCAYKLCK++ Y
Sbjct: 151 GEYKAEEDPRLYRSVKTGRGPLADDWAR---TAAQTGP--------LMCAYKLCKVEFRY 199
Query: 83 WGIQSKVERFIADTG 97
WG+Q+K+E+FI D G
Sbjct: 200 WGMQAKIEQFIHDVG 214
>sp|Q2HJ54|PIPNA_BOVIN Phosphatidylinositol transfer protein alpha isoform OS=Bos taurus
GN=PITPNA PE=1 SV=3
Length = 270
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 24 DYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNYW 83
DY EEDP+ Y S TGRGPL NW E V+ + MCAYKL ++ +W
Sbjct: 153 DYKAEEDPAKYKSIKTGRGPLGPNWKQE---------LVNQKDCPYMCAYKLVTVKFKWW 203
Query: 84 GIQSKVERFIADTGKPSGRALPRHFRRAL 112
G+Q+KVE FI R L +F R L
Sbjct: 204 GLQNKVENFI----HKQERRLFTNFHRQL 228
>sp|Q00169|PIPNA_HUMAN Phosphatidylinositol transfer protein alpha isoform OS=Homo sapiens
GN=PITPNA PE=1 SV=2
Length = 270
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 24 DYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNYW 83
DY EEDP+ + S TGRGPL NW E V+ + MCAYKL ++ +W
Sbjct: 153 DYKAEEDPAKFKSIKTGRGPLGPNWKQE---------LVNQKDCPYMCAYKLVTVKFKWW 203
Query: 84 GIQSKVERFIADTGKPSGRALPRHFRRAL 112
G+Q+KVE FI R L +F R L
Sbjct: 204 GLQNKVENFI----HKQERRLFTNFHRQL 228
>sp|P48738|PIPNA_RABIT Phosphatidylinositol transfer protein alpha isoform OS=Oryctolagus
cuniculus GN=PITPNA PE=3 SV=2
Length = 270
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 24 DYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNYW 83
DY EEDP+ + S TGRGPL NW E V+ + MCAYKL ++ +W
Sbjct: 153 DYKAEEDPAKFKSIKTGRGPLGPNWKQE---------LVNQKDCPYMCAYKLVTVKFKWW 203
Query: 84 GIQSKVERFIADTGKPSGRALPRHFRRAL 112
G+Q+KVE FI R L +F R L
Sbjct: 204 GLQNKVENFI----HKQERRLFTNFHRQL 228
>sp|P53810|PIPNA_MOUSE Phosphatidylinositol transfer protein alpha isoform OS=Mus musculus
GN=Pitpna PE=1 SV=2
Length = 271
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Query: 24 DYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNYW 83
DY EEDP+ + S TGRGPL NW E V+ + MCAYKL ++ +W
Sbjct: 154 DYKAEEDPAKFKSVKTGRGPLGPNWKQE---------LVNQKDCPYMCAYKLVTVKFKWW 204
Query: 84 GIQSKVERFI 93
G+Q+KVE FI
Sbjct: 205 GLQNKVENFI 214
>sp|P16446|PIPNA_RAT Phosphatidylinositol transfer protein alpha isoform OS=Rattus
norvegicus GN=Pitpna PE=1 SV=2
Length = 271
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Query: 24 DYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNYW 83
DY EEDP+ + S TGRGPL NW E V+ + MCAYKL ++ +W
Sbjct: 154 DYKAEEDPAKFKSIKTGRGPLGPNWKQE---------LVNQKDCPYMCAYKLVTVKFKWW 204
Query: 84 GIQSKVERFI 93
G+Q+KVE FI
Sbjct: 205 GLQNKVENFI 214
>sp|Q5R6F0|PIPNB_PONAB Phosphatidylinositol transfer protein beta isoform OS=Pongo abelii
GN=PITPNB PE=2 SV=3
Length = 272
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 23 GDYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNY 82
DY +EDP+++ S T RGPL NW E N+ + MCAYKL I+ +
Sbjct: 152 ADYKADEDPALFQSVKTKRGPLGPNWKKELANS---------PDCPQMCAYKLVTIKFKW 202
Query: 83 WGIQSKVERFIADTGK 98
WG+QSKVE FI K
Sbjct: 203 WGLQSKVENFIQKQEK 218
>sp|P48739|PIPNB_HUMAN Phosphatidylinositol transfer protein beta isoform OS=Homo sapiens
GN=PITPNB PE=1 SV=2
Length = 271
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 23 GDYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNY 82
DY +EDP+++ S T RGPL NW E N+ + MCAYKL I+ +
Sbjct: 152 ADYKADEDPALFQSVKTKRGPLGPNWKKELANS---------PDCPQMCAYKLVTIKFKW 202
Query: 83 WGIQSKVERFIADTGK 98
WG+QSKVE FI K
Sbjct: 203 WGLQSKVENFIQKQEK 218
>sp|Q9TR36|PIPNB_BOVIN Phosphatidylinositol transfer protein beta isoform OS=Bos taurus
GN=PITPNB PE=1 SV=3
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 23 GDYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNY 82
DY +EDP+++ S T RGPL NW E N +P MCAYKL I+ +
Sbjct: 152 ADYKADEDPALFQSVKTKRGPLGPNWKKELAN----NPDCPQ-----MCAYKLVTIKFKW 202
Query: 83 WGIQSKVERFIADTGK 98
WG+QSKVE FI K
Sbjct: 203 WGLQSKVENFIQKQEK 218
>sp|P53812|PIPNB_RAT Phosphatidylinositol transfer protein beta isoform OS=Rattus
norvegicus GN=Pitpnb PE=1 SV=2
Length = 271
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 23 GDYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNY 82
DY +EDP+++ S T RGPL NW E N + MCAYKL I+ +
Sbjct: 152 ADYKADEDPALFQSVKTKRGPLGPNWKKELANT---------PDCPKMCAYKLVTIKFKW 202
Query: 83 WGIQSKVERFIADTGK 98
WG+QSKVE FI K
Sbjct: 203 WGLQSKVENFIQKQEK 218
>sp|P53811|PIPNB_MOUSE Phosphatidylinositol transfer protein beta isoform OS=Mus musculus
GN=Pitpnb PE=1 SV=2
Length = 271
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 23 GDYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNY 82
DY +EDP+++ S T RGPL NW E N + MCAYKL I+ +
Sbjct: 152 ADYKADEDPALFHSVKTKRGPLGPNWKKELANT---------PDCPRMCAYKLVTIKFKW 202
Query: 83 WGIQSKVERFIADTGK 98
WG+QSKVE FI K
Sbjct: 203 WGLQSKVENFIQKQEK 218
>sp|Q54VC7|PITP3_DICDI Phosphatidylinositol transfer protein 3 OS=Dictyostelium discoideum
GN=pitC PE=3 SV=1
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 14/69 (20%)
Query: 25 YVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNYWG 84
Y EEDP I+ S TGRG L +W+ K +MC YK+CK++ WG
Sbjct: 152 YKPEEDPKIFQSVKTGRGKLQNDWMK--------------STKPIMCCYKVCKVEFRCWG 197
Query: 85 IQSKVERFI 93
+Q+KVE FI
Sbjct: 198 VQNKVENFI 206
>sp|Q9NCL7|PITP2_DICDI Phosphatidylinositol transfer protein 2 OS=Dictyostelium discoideum
GN=pitB PE=2 SV=1
Length = 259
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 13/74 (17%)
Query: 24 DYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNYW 83
+Y++EEDP I+ S T RGPL +DP + +M YKL + YW
Sbjct: 149 EYIKEEDPKIFKSVKTERGPL-------------DDPKWRDKVEPVMTCYKLVHAEFKYW 195
Query: 84 GIQSKVERFIADTG 97
G Q+KVE I DTG
Sbjct: 196 GFQTKVENVIQDTG 209
>sp|Q54D93|PITP4_DICDI Phosphatidylinositol transfer protein 4 OS=Dictyostelium discoideum
GN=pitD PE=3 SV=2
Length = 331
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 22 GGDYVREEDPSIYVSKTTGRGPL-SENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQL 80
G D +EDP ++ SK TGRGPL S NW E A M YKL +
Sbjct: 150 GKDVKTDEDPRMFKSKLTGRGPLTSPNWRKEVNPA--------------MVVYKLVTVNF 195
Query: 81 NYWGIQSKVERFIADTG 97
NYWG Q++VE + G
Sbjct: 196 NYWGFQNRVENLVQTNG 212
>sp|Q28CA0|PITC1_XENTR Cytoplasmic phosphatidylinositol transfer protein 1 OS=Xenopus
tropicalis GN=pitpnc1 PE=2 SV=1
Length = 329
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 14/69 (20%)
Query: 25 YVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNYWG 84
Y EDP +VS+ TGRG L E W + +MC+YKL ++ WG
Sbjct: 150 YKESEDPKNFVSEKTGRGQLKEGW--------------REAQEPIMCSYKLVAVKFEVWG 195
Query: 85 IQSKVERFI 93
+QS+VE+F+
Sbjct: 196 LQSRVEQFV 204
>sp|Q9U9P7|PITC1_DROME Cytoplasmic phosphatidylinositol transfer protein 1 OS=Drosophila
melanogaster GN=rdgBbeta PE=2 SV=1
Length = 273
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 14/69 (20%)
Query: 25 YVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNYWG 84
Y +EEDP + S+ T RGPL E W +K +MC+YK+ WG
Sbjct: 152 YKKEEDPKFFKSEKTNRGPLIEGW--------------RETDKPIMCSYKVVHASFEVWG 197
Query: 85 IQSKVERFI 93
+Q+KVE FI
Sbjct: 198 LQTKVEDFI 206
>sp|Q8K4R4|PITC1_MOUSE Cytoplasmic phosphatidylinositol transfer protein 1 OS=Mus musculus
GN=Pitpnc1 PE=1 SV=1
Length = 332
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 14/69 (20%)
Query: 25 YVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNYWG 84
Y EDP + S+ TGRG L E W +++ +MC+YKL ++ WG
Sbjct: 150 YKESEDPKHFKSEKTGRGQLREGW--------------RDNHQPIMCSYKLVTVKFEVWG 195
Query: 85 IQSKVERFI 93
+Q++VE+F+
Sbjct: 196 LQTRVEQFV 204
>sp|Q9UKF7|PITC1_HUMAN Cytoplasmic phosphatidylinositol transfer protein 1 OS=Homo sapiens
GN=PITPNC1 PE=1 SV=2
Length = 332
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 14/69 (20%)
Query: 25 YVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNYWG 84
Y EDP + S+ TGRG L E W ++ +MC+YKL ++ WG
Sbjct: 150 YKESEDPKHFKSEKTGRGQLREGW--------------RDSHQPIMCSYKLVTVKFEVWG 195
Query: 85 IQSKVERFI 93
+Q++VE+F+
Sbjct: 196 LQTRVEQFV 204
>sp|Q9NCL8|PITP1_DICDI Phosphatidylinositol transfer protein 1 OS=Dictyostelium discoideum
GN=pitA PE=1 SV=1
Length = 264
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 12/70 (17%)
Query: 24 DYVREEDPSIYVSKTTGRGPLSENWISEYWNAVKEDPTVSHDNKSMMCAYKLCKIQLNYW 83
+Y EDP+ S+ RGPL E E W E P +M YKL ++ Y+
Sbjct: 151 NYKETEDPTKIRSEKANRGPLEE----EKWRESTEMP--------IMTCYKLVTVEFKYF 198
Query: 84 GIQSKVERFI 93
G Q+KVE F+
Sbjct: 199 GFQTKVENFM 208
>sp|P40851|AXL1_YEAST Putative protease AXL1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=AXL1 PE=1 SV=2
Length = 1208
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 31 PSIYVSKTTGRGPL-SENWISEYWNAVKEDPTVSHDNKSMM 70
P IY T + L SEN E W +KEDP + DNKS++
Sbjct: 609 PQIYSEPTRTKPQLVSENQNYEMW-ILKEDPNFASDNKSVV 648
>sp|Q8Y368|THIC_RALSO Phosphomethylpyrimidine synthase OS=Ralstonia solanacearum (strain
GMI1000) GN=thiC PE=3 SV=1
Length = 631
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 18/78 (23%)
Query: 2 KSTVLTTEVGNTLYKTKCLY--GGDYVREEDPSIYVSKTTGRGPLSENWI---------- 49
K T T+ G L +Y G Y DP +++ G PL WI
Sbjct: 48 KQTATRTDQGEMLNPPIPVYDTSGPY---SDPDVHIDLKAGLAPLRAKWIDERGDTVVLP 104
Query: 50 ---SEYWNAVKEDPTVSH 64
SEY A DP +H
Sbjct: 105 SLSSEYGQARAHDPATAH 122
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,328,050
Number of Sequences: 539616
Number of extensions: 1877267
Number of successful extensions: 3994
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3943
Number of HSP's gapped (non-prelim): 30
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)