RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4663
(966 letters)
>d1nvus_ a.117.1.1 (S:) Son of sevenless protein homolog 1 (sos-1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 481
Score = 430 bits (1106), Expect = e-142
Identities = 273/476 (57%), Positives = 349/476 (73%), Gaps = 17/476 (3%)
Query: 246 LRQPSPELYKFSEPDCPANIILEEKD-NHTGVPLIKGATLYKLVERLTYHIYADPAFVRT 304
+R PS ++Y+F+EPD NII EE G+P+IK T+ KL+ERLTYH+YADP FVRT
Sbjct: 2 MRLPSADVYRFAEPDSEENIIFEENMQPKAGIPIIKAGTVIKLIERLTYHMYADPNFVRT 61
Query: 305 FLTTYRSFCTPLNFLQLLIERFSIPEFQGT-------------VREDLKKFRKEYVQPVQ 351
FLTTYRSFC P L L+IERF IPE + T + +LK+FRKEY+QPVQ
Sbjct: 62 FLTTYRSFCKPQELLSLIIERFEIPEPEPTEADRIAIENGDQPLSAELKRFRKEYIQPVQ 121
Query: 352 FRVLNVLRHWVDHHFYDFEQDAHLLEQLKLFLETINGKSMRKWVDSVSKVIFRKTDPLEL 411
RVLNV RHWV+HHFYDFE+DA+LL++++ F+ T+ GK+M+KWV+S++K+I RK +
Sbjct: 122 LRVLNVCRHWVEHHFYDFERDAYLLQRMEEFIGTVRGKAMKKWVESITKIIQRKKIARDN 181
Query: 412 QKQIKFAFDRSPPPIEWHL--KCSEEEWNILVLHPVEIARQLTLLESEYYRAVKPSEIVG 469
F SPP +EWH+ E +++L LHP+EIARQLTLLES+ YRAV+PSE+VG
Sbjct: 182 GPGHNITFQSSPPTVEWHISRPGHIETFDLLTLHPIEIARQLTLLESDLYRAVQPSELVG 241
Query: 470 SAWTKSNKEEKSPNLLKIIKHTTNFTRWLEKTIVETENLEERIAIVSRAIEIMMVLNDLN 529
S WTK +KE SPNLLK+I+HTTN T W EK IVETENLEER+A+VSR IEI+ V +LN
Sbjct: 242 SVWTKEDKEINSPNLLKMIRHTTNLTLWFEKCIVETENLEERVAVVSRIIEILQVFQELN 301
Query: 530 NFNGVLAIVSALGSASVYRLKCTFQALPARLENALVELRELGNDHFRKYQERLRSINPPC 589
NFNGVL +VSA+ S+ VYRL TF+ +P+R + L E EL DH++KY +LRSINPPC
Sbjct: 302 NFNGVLEVVSAMNSSPVYRLDHTFEQIPSRQKKILEEAHELSEDHYKKYLAKLRSINPPC 361
Query: 590 VPFFGMYLTNILHIEEGNPDYLPNSNEELINFSKRRRVAEITGEIQQFQNSPYCLSVEPR 649
VPFFG+YLTNIL EEGNP+ L +ELINFSKRR+VAEITGEIQQ+QN PYCL VE
Sbjct: 362 VPFFGIYLTNILKTEEGNPEVLKRHGKELINFSKRRKVAEITGEIQQYQNQPYCLRVESD 421
Query: 650 IRRFLENLTPFDNWKEIDISNYLYEQSLKIEPRYAKLRKDIPRRWPNLSLKSPGIK 705
I+RF ENL P N E + ++YL+ +SL+IEPR K P+++ + LKSPG++
Sbjct: 422 IKRFFENLNPMGNSMEKEFTDYLFNKSLEIEPRNPKPLPRFPKKY-SYPLKSPGVR 476
>d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 107 bits (267), Expect = 9e-28
Identities = 65/142 (45%), Positives = 90/142 (63%), Gaps = 10/142 (7%)
Query: 87 AIEKTNELSKTVDGWTSVDIGQCCNEFFREDTLLKLNIGKKTESTERVCFLFDGLLLLCK 146
AI+K NE+ K +DGW DIGQCCNEF E TL ++ ER FLFDGL++ CK
Sbjct: 1 AIKKMNEIQKNIDGWEGKDIGQCCNEFIMEGTLTRVGAKH-----ERHIFLFDGLMICCK 55
Query: 147 PNSKRTSVSVTAPLGGNQGEYRLKERFFIRRIEILDLPDSDDYKNAFQIVPRCGSPVILI 206
N + + G + EYRLKE+FF+R+++I D D+++YK+AF+I+ + + VI
Sbjct: 56 SNHGQPRLP-----GASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFS 110
Query: 207 ANSPEDKNNWMADLIMLNTKSM 228
A S E+KNNWMA LI L +S
Sbjct: 111 AKSAEEKNNWMAALISLQYRST 132
>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor
9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 162
Score = 77.9 bits (191), Expect = 3e-17
Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 22/167 (13%)
Query: 88 IEKTNELSKTVDGWTSVDIGQCCNEFFREDTLLKLNIGKKTESTERVCFLFDGLLLLCKP 147
I+K + +V W DI +E + + +RV FLFD ++LCK
Sbjct: 2 IDKIAQWQASVLDWEGDDILDRSSELIYTGEMAW-IYQPYGRNQQRVFFLFDHQMVLCKK 60
Query: 148 NSKRTSVSVTAPLGGNQGEYRLKERFFIRRIEILDLPDSDD------YKNAFQIVPRCGS 201
+ R K R + + E++D+ D D KNAF++ +
Sbjct: 61 DLIRRD------------ILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETE 108
Query: 202 PV-ILIANSPEDKNNWMADLIMLNTKSMFERTLDSILLDEEKKHPLR 247
V + A E+K W+ + M + E +
Sbjct: 109 EVHLFFAKKLEEKIRWLRAFR--EERKMVQEDEKIGFEISENQKRQA 153
>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 132
Score = 69.0 bits (168), Expect = 2e-14
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 15/128 (11%)
Query: 93 ELSKTVDGWTSVDIGQCCNEFFREDTLLKLNIGKKTESTERVCFLFDGLLLLCKPNSKRT 152
LS+ + W DI N F + + G E ER LF +L++ + + +
Sbjct: 9 ILSEPIQAWEGDDIKTLGNVIFMSQ--VVMQHGACEEKEERYFLLFSSVLIMLSASPRMS 66
Query: 153 SVSVTAPLGGNQGEYRLKERFFIRRIEILDLPDSDDYKNAFQIVPRCGSPVILIANSPED 212
+ + + I + + L + + F+I +++ N+ +D
Sbjct: 67 -------------GFMYQGKIPIAGMVVNRLDEIEGSDCMFEITGSTVERIVVHCNNNQD 113
Query: 213 KNNWMADL 220
WM L
Sbjct: 114 FQEWMEQL 121
>d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 142
Score = 59.4 bits (143), Expect = 5e-11
Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 7/110 (6%)
Query: 112 EFFREDTLLKLNIGKKTESTERVCFLFDGLLLLCKPNS-KRTSVSVTAPLGGNQGEYRLK 170
+F L K K E FLF+ LLL + +S + + +Y K
Sbjct: 24 KFLHSGKLYKAKNNK-----ELYGFLFNDFLLLTQITKPLGSSGTDKVFSPKSNLQYMYK 78
Query: 171 ERFFIRRIEILDLPDSDDYKNAFQIVPRCGSPVILIANSPEDKNNWMADL 220
F+ + + D + F I L A S ++ W+ +
Sbjct: 79 TPIFLNEVLVKLPTDPSGDEPIFHISHIDRV-YTLRAESINERTAWVQKI 127
>d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 147
Score = 59.0 bits (142), Expect = 7e-11
Identities = 21/117 (17%), Positives = 38/117 (32%), Gaps = 13/117 (11%)
Query: 132 ERVCFLFDGLLLLCKPNSKRTSVSVTAPLGGNQGEYRLKERFFIRRIEILDLPDSDDYKN 191
+R FL + +L CK + Y K+ + + I + D K
Sbjct: 42 QRHLFLHEKAVLFCKKREENG------EGYEKAPSYSYKQSLNMTAVGITENVKGDTKKF 95
Query: 192 AFQIVPRCGSPVILIANSPEDKNNWMADLIMLNTKSMFERTLDSILLDEEKKHPLRQ 248
R I+ A +PE K W+ + + + L + + + L Q
Sbjct: 96 EIWYNAREEV-YIIQAPTPEIKAAWVNAI-----RKVLTSQLQA-CREASQHRALEQ 145
>d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein
TRIO {Human (Homo sapiens) [TaxId: 9606]}
Length = 121
Score = 55.4 bits (133), Expect = 9e-10
Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 17/114 (14%)
Query: 112 EFFREDTLLKLN-IGKKTESTERVCFLFDGLLLLCKPNSKRTSVSVTAPLGGNQGEYRLK 170
E +++ + + ER FLF+ L+ K + +Y K
Sbjct: 12 ELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKD----------SSGRSKYLYK 61
Query: 171 ERFFIRRIEILDLPDSDDYKNAFQIV----PRCGSPVILIANSPEDKNNWMADL 220
+ F + + + + D K F + P + ++L A+S E+K +W+ +
Sbjct: 62 SKLFTSELGVTEHVEGDPCK--FALWVGRTPTSDNKIVLKASSIENKQDWIKHI 113
>d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 109
Score = 54.3 bits (130), Expect = 1e-09
Identities = 18/109 (16%), Positives = 40/109 (36%), Gaps = 13/109 (11%)
Query: 112 EFFREDTLLKLNIGKKTESTERVCFLFDGLLLLCKPNSKRTSVSVTAPLGGNQGEYRLKE 171
L++ + FL + LL+ + +G YR
Sbjct: 3 YLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQ------------RRGMYRYNA 50
Query: 172 RFFIRRIEILDLPDSDDYKNAFQIVPRCGSPVILIANSPEDKNNWMADL 220
+ + R+ ++++ D+ K+ F+++ S I A + + K W+ L
Sbjct: 51 LYPLDRLAVVNVKDNPPMKDMFKLLMFPES-RIFQAENAKIKREWLEVL 98
>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange
factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId:
9606]}
Length = 140
Score = 55.1 bits (132), Expect = 1e-09
Identities = 23/138 (16%), Positives = 49/138 (35%), Gaps = 11/138 (7%)
Query: 87 AIEKTNELSKTVDGWTSVDIGQCCNEFFREDTLLKLNIGKKTESTERVCFLFDGLLLLCK 146
A+E+ + + S+D+ + E L K + + L + LL+L +
Sbjct: 3 ALERASN--PLAAEFKSLDLTT--RKMIHEGPLTWRISKDK--TLDLHVLLLEDLLVLLQ 56
Query: 147 PNSKRTSVSVTAPLGGNQGEYRLKERFFIRRIEILDLPDSDDYKNAFQIV----PRCGSP 202
++ + + + + + ++ + + K AF I+
Sbjct: 57 KQDEKLLLKCHSKTAVGSSDSKQTFSPVL-KLNAVLIRSVATDKRAFFIICTSKLGPPQI 115
Query: 203 VILIANSPEDKNNWMADL 220
L+A + DKN WM L
Sbjct: 116 YELVALTSSDKNTWMELL 133
>d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange
factor 12 {Human (Homo sapiens), gamma isoform [TaxId:
9606]}
Length = 114
Score = 52.8 bits (126), Expect = 5e-09
Identities = 14/97 (14%), Positives = 35/97 (36%), Gaps = 2/97 (2%)
Query: 126 KKTESTERVCFLFDGLLLLCKPNSKRTSVSVTAPLGGNQGEYRLKERFFIRRIEILDLPD 185
+ ++ + L + +L+L + R + + + + + + I+ +L
Sbjct: 12 NRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQV 71
Query: 186 SDDYKNAFQIVPRCGSPV--ILIANSPEDKNNWMADL 220
+ D K F I L+A + +K W +
Sbjct: 72 ATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLI 108
>d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 119
Score = 48.0 bits (114), Expect = 2e-07
Identities = 13/115 (11%), Positives = 29/115 (25%), Gaps = 22/115 (19%)
Query: 112 EFFREDTLLKLNIGKKTESTERVCFLFDGLLLLCKPNSKRTSVSVTAPLGGNQGEYRLKE 171
R D + R FLF ++ + ++ + S Y
Sbjct: 9 RIIRHDAFQVWEGDEP--PKLRYVFLFRNKIMFTEQDASTSPPS-----------YTHYS 55
Query: 172 RFFIRRIEILDLPDSDDYKNAFQIVPRCGSP------VILIANSPEDKNNWMADL 220
+ + I + + + P+ S + W+ D+
Sbjct: 56 SIRLDKYNIRQHTTDE---DTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDI 107
>d1dbha1 a.87.1.1 (A:198-404) Son of sevenless-1 (sos-1) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 207
Score = 41.3 bits (96), Expect = 2e-04
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 2 QGFKEAVKYYLPKLFLHPLWHCFLYFDYIRILRGLSPDKEDRESLIQVEGLLKALQVDLS 61
+GFKEAV+Y LP+L L P++HC YF+ ++ L S D+ED+E L Q L +Q +
Sbjct: 132 EGFKEAVQYVLPRLLLAPVYHCLHYFELLKQLEEKSEDQEDKECLKQAITALLNVQSGME 191
Query: 62 DSLQNYPRNGR 72
R
Sbjct: 192 KICSKSLAKRR 202
>d1q9ca_ a.22.1.3 (A:) Histone domain of Son of sevenless protein
{Human (Homo sapiens) [TaxId: 9606]}
Length = 172
Score = 37.5 bits (87), Expect = 0.003
Identities = 20/35 (57%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 925 DKWAMHEAKEAIEKSKKKISCLVLPVEKIHYLLSK 959
DKWA+ +A+ AIEK K++ + L LPVEKIH LL +
Sbjct: 78 DKWAIADAQSAIEKRKRR-NPLSLPVEKIHPLLKE 111
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl
isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Length = 153
Score = 32.7 bits (73), Expect = 0.092
Identities = 14/136 (10%), Positives = 42/136 (30%), Gaps = 11/136 (8%)
Query: 559 RLENALVELRELGNDHFR--KYQERLR--SINPPCVPFFGMYLTNILHIEEGNPDYLPNS 614
++++A +++E GN+ F+ + E + + IL ++ N + N
Sbjct: 13 KVQSAF-DIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNL 71
Query: 615 NEELINFSKRRRVAEITGEIQQFQNSPYCLSVEPRIRRFLENLTPFDNWKEIDISNYLYE 674
N + I + + + ++ ++ +
Sbjct: 72 NLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYF------GFLEEAKENLY 125
Query: 675 QSLKIEPRYAKLRKDI 690
++ + P +R
Sbjct: 126 KAASLNPNNLDIRNSY 141
>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 30.7 bits (68), Expect = 0.24
Identities = 15/106 (14%), Positives = 33/106 (31%), Gaps = 10/106 (9%)
Query: 115 REDTLLKLNIGKKTESTERVCFLFDGLLLLCKPNSKRTSVSVTAPLGGNQGEYRLKERFF 174
++ LLK +K R L + L + +
Sbjct: 4 KQGCLLKQGHRRKN-WKVRKFILREDPAYLHYYDPAGAEDPL---------GAIHLRGCV 53
Query: 175 IRRIEILDLPDSDDYKNAFQIVPRCGSPVILIANSPEDKNNWMADL 220
+ +E + +N F+I+ L A +P+++ W+ +
Sbjct: 54 VTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAI 99
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey
(Saimiri boliviensis) [TaxId: 27679]}
Length = 168
Score = 31.5 bits (70), Expect = 0.25
Identities = 20/135 (14%), Positives = 40/135 (29%), Gaps = 10/135 (7%)
Query: 559 RLENALVELRELGNDHFR--KYQERLRSINPPCVPFFGMYLTNILHIEEGNPDYLP-NSN 615
+LE A ++E G +F+ KY + + Y + + L N
Sbjct: 11 KLEQAA-IVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLN 69
Query: 616 EELINFSKRRRVAEITGEIQQFQNSPYCLSVEPRIRRFLENLTPFDNWKEIDISNYLYEQ 675
+ R + + R + F++ K +E+
Sbjct: 70 LAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGD------FEK 123
Query: 676 SLKIEPRYAKLRKDI 690
L++ P+ R I
Sbjct: 124 VLEVNPQNKAARLQI 138
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 31.6 bits (70), Expect = 0.28
Identities = 11/134 (8%), Positives = 36/134 (26%), Gaps = 8/134 (5%)
Query: 559 RLENALVELRELGNDHFR--KYQERLRSINPPCVPFFGMYLTNILHIEEGNPDYLPNSNE 616
+LE + ++E G +F+ KY++ L + ++ L
Sbjct: 9 KLEQST-IVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRL----- 62
Query: 617 ELINFSKRRRVAEITGEIQQFQNSPYCLSVEPRIRRFLENLTPFDNWKEIDISNYLYEQS 676
+ + + + +++ +++
Sbjct: 63 ASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKV 122
Query: 677 LKIEPRYAKLRKDI 690
L++ P + +
Sbjct: 123 LQLYPNNKAAKTQL 136
>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein
APS {Mouse (Mus musculus) [TaxId: 10090]}
Length = 136
Score = 29.8 bits (66), Expect = 0.76
Identities = 12/88 (13%), Positives = 23/88 (26%), Gaps = 7/88 (7%)
Query: 133 RVCFLFDGLLLLCKPNSKRTSVSVTAPLGGNQGEYRLKERFFIRRIEILDLPDSDDYKNA 192
L + + P I + + + N
Sbjct: 45 CRLLLRRAVAGERFRLEFFVPPKASRPKVSIP-------LSAIIEVRTTMPLEMPEKDNT 97
Query: 193 FQIVPRCGSPVILIANSPEDKNNWMADL 220
F + G+ IL K++W+AD+
Sbjct: 98 FVLKVENGAEYILETIDSLQKHSWVADI 125
>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 122
Score = 29.5 bits (65), Expect = 0.79
Identities = 11/88 (12%), Positives = 27/88 (30%), Gaps = 7/88 (7%)
Query: 133 RVCFLFDGLLLLCKPNSKRTSVSVTAPLGGNQGEYRLKERFFIRRIEILDLPDSDDYKNA 192
+V + + K + G + ++ I D K+
Sbjct: 34 KVYMAAKAGRISFYKDQKGYKSNPELTFRGE-------PSYDLQNAAIEIASDYTKKKHV 86
Query: 193 FQIVPRCGSPVILIANSPEDKNNWMADL 220
++ G+ +L A+ + + W+ L
Sbjct: 87 LRVKLANGALFLLQAHDDTEMSQWVTSL 114
>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding
protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 28.7 bits (63), Expect = 1.1
Identities = 7/37 (18%), Positives = 12/37 (32%)
Query: 184 PDSDDYKNAFQIVPRCGSPVILIANSPEDKNNWMADL 220
+ F +L A++ ED W+ L
Sbjct: 66 GAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRAL 102
>d1j5sa_ c.1.9.8 (A:) Uronate isomerase TM0064 {Thermotoga maritima
[TaxId: 2336]}
Length = 451
Score = 30.3 bits (68), Expect = 1.3
Identities = 26/188 (13%), Positives = 55/188 (29%), Gaps = 27/188 (14%)
Query: 284 LYKLVERL---TYHIYADP---AFVRTFLTTYRSFCTPLNFLQLLIERFSIPEFQGTVRE 337
L+ V+ L H + D + + + +++ L+ R + E T
Sbjct: 18 LFNEVKDLPIVDPHNHLDAKDIVENKPWNDIWEVEGATDHYVWELMRRCGVSEEYITGSR 77
Query: 338 DLKKFRKEYVQPVQFRVLNVLRHWVDHHFYD-FEQDAHLLEQ-LKLFLETINGKSMRKWV 395
K+ + V N W+ + F + E+ + E K
Sbjct: 78 SNKEKWLALAKVFPRFVGNPTYEWIHLDLWRRFNIKKVISEETAEEIWEETKKKLPEMTP 137
Query: 396 -----DSVSKVIFRKTDPLELQKQIKFAFDRSPPPIEWHLKCSEEEWNILVLHPVEIARQ 450
D +++ DP+ +E H K E + +L R
Sbjct: 138 QKLLRDMKVEILCTTDDPVS--------------TLEHHRKAKEAVEGVTILPTWRPDRA 183
Query: 451 LTLLESEY 458
+ + + +
Sbjct: 184 MNVDKEGW 191
>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 209
Score = 29.5 bits (65), Expect = 1.4
Identities = 9/47 (19%), Positives = 12/47 (25%)
Query: 174 FIRRIEILDLPDSDDYKNAFQIVPRCGSPVILIANSPEDKNNWMADL 220
L F+I A SP+D W+ L
Sbjct: 155 GYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQL 201
>d2cp6a1 b.34.10.1 (A:8-167) Restin {Human (Homo sapiens) [TaxId:
9606]}
Length = 160
Score = 29.3 bits (65), Expect = 1.4
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 845 SRDISPPPLPPRRETRPSLSSPPGYASSPDPSPSSPGRFHVSSPSPSKPSGSTSRLPLLP 904
++ P P + + ++S SPS+ +SS + S S SR LL
Sbjct: 99 TKIGFPSTTPAKAKANAVRRVMATTSASLKRSPSASSLSSMSSVASSVSS-RPSRTGLLT 157
Query: 905 PK 906
Sbjct: 158 ET 159
>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 116
Score = 28.3 bits (62), Expect = 1.8
Identities = 14/112 (12%), Positives = 34/112 (30%), Gaps = 10/112 (8%)
Query: 111 NEFFREDTLLKLNIGKKTESTERVCFLFDGLLLL--CKPNSKRTSVSVTAPLGGNQGEYR 168
++ L K +K R L L P+ + L G+
Sbjct: 9 GTVVKQGYLAKQGHKRKN-WKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSA- 66
Query: 169 LKERFFIRRIEILDLPDSDDYKNAFQIVPRCGSPVILIANSPEDKNNWMADL 220
+ + + N F+++ + + + A+S ++ W+ +
Sbjct: 67 ------LEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAI 112
>d1f5xa_ a.87.1.1 (A:) RhoGEF Vav {Mouse (Mus musculus) [TaxId:
10090]}
Length = 208
Score = 28.6 bits (63), Expect = 2.7
Identities = 9/55 (16%), Positives = 21/55 (38%)
Query: 2 QGFKEAVKYYLPKLFLHPLWHCFLYFDYIRILRGLSPDKEDRESLIQVEGLLKAL 56
++ L L + P+ Y ++ L + D ++E+L ++ L
Sbjct: 145 SQRANNGRFTLRDLLMVPMQRVLKYHLLLQELVKHTQDATEKENLRLALDAMRDL 199
>d1rypk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 198
Score = 28.6 bits (63), Expect = 2.8
Identities = 6/52 (11%), Positives = 17/52 (32%)
Query: 491 TTNFTRWLEKTIVETENLEERIAIVSRAIEIMMVLNDLNNFNGVLAIVSALG 542
L+ EE + ++ ++ + ++ ++ IV G
Sbjct: 137 GFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDKDG 188
>d2r5fa1 c.124.1.8 (A:59-316) Transcriptional regulator PSPTO2395
{Pseudomonas syringae [TaxId: 317]}
Length = 258
Score = 28.4 bits (63), Expect = 3.9
Identities = 10/47 (21%), Positives = 26/47 (55%)
Query: 166 EYRLKERFFIRRIEILDLPDSDDYKNAFQIVPRCGSPVILIANSPED 212
E RL++ + IR++ +++ + DD ++ Q + + + + S +D
Sbjct: 8 ETRLQKMYGIRQVIVVEATEPDDEESIKQAIGSAAAHYLETSLSAQD 54
>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain
[TaxId: 10090]}
Length = 106
Score = 27.0 bits (58), Expect = 4.2
Identities = 9/57 (15%), Positives = 20/57 (35%)
Query: 164 QGEYRLKERFFIRRIEILDLPDSDDYKNAFQIVPRCGSPVILIANSPEDKNNWMADL 220
Y + ++ D K+ F++ G+ + A E+ N W+ +
Sbjct: 47 GIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAI 103
>d1imva_ e.1.1.1 (A:) Pigment epithelium-derived factor, PEDF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 28.3 bits (62), Expect = 4.8
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 5/57 (8%)
Query: 729 NSPLSESDGTPQTPLTPPT-ANSEFTV--FAPIMLSNANGSQ--SPGSVSTAFSMFS 780
+ + E D + P+ A S F + + + SP SV+TA S S
Sbjct: 2 GALVEEEDPFFKVPVNKLAAAVSNFGYDLYRVRSSMSPTTNVLLSPLSVATALSALS 58
>d1zuna1 c.26.2.2 (A:1-211) Sulfate adenylyltransferase subunit 2,
CysD {Pseudomonas syringae pv. tomato [TaxId: 323]}
Length = 211
Score = 26.9 bits (58), Expect = 9.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 659 PFDNWKEIDISNYLYEQSLKIEPRY 683
P NW E+DI Y+Y + + I P Y
Sbjct: 184 PLSNWTELDIWQYIYLEGIPIVPLY 208
>d2dfka1 a.87.1.1 (A:37-239) Rho guanine nucleotide exchange factor
9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 203
Score = 27.0 bits (59), Expect = 9.7
Identities = 6/56 (10%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 2 QGFKEAVKYYLPKLFLHPLWHCFLYFDYI-RILRGLSPDKEDRESLIQVEGLLKAL 56
+ ++ + + L P+ Y + +L+ + D D + +++ +
Sbjct: 136 RLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTAQDHSDYRYVAAALAVMRNV 191
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.135 0.404
Gapped
Lambda K H
0.267 0.0564 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,716,423
Number of extensions: 186359
Number of successful extensions: 555
Number of sequences better than 10.0: 1
Number of HSP's gapped: 537
Number of HSP's successfully gapped: 36
Length of query: 966
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 872
Effective length of database: 1,116,976
Effective search space: 974003072
Effective search space used: 974003072
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.1 bits)