BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4665
(673 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91YJ5|IF2M_MOUSE Translation initiation factor IF-2, mitochondrial OS=Mus musculus
GN=Mtif2 PE=1 SV=2
Length = 727
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 252/698 (36%), Positives = 364/698 (52%), Gaps = 148/698 (21%)
Query: 43 DHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPTNSVADDSNGKDVER 102
D +YE ++ V+ +S + D I ++I+K+GMK ++ KD R
Sbjct: 111 DCVYEALLNTAIDVDSLEANSHL-DEVWIKEVIKKAGMKLKWSKLKQERIREN--KDAVR 167
Query: 103 RPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSG 162
RP DP++L R PVVT+MGHVDHGKTTLLD LR T V E GGITQHIGAF+V+L SG
Sbjct: 168 RPGTDPALLKPRSPVVTVMGHVDHGKTTLLDKLRETQVAAMEVGGITQHIGAFLVSLPSG 227
Query: 163 EQVTFLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAI 222
E++TFLDTPGHAAFS MR+RGA TDIVVLVVAADDGVM+QTVESI+ A++A+VPII+AI
Sbjct: 228 EKITFLDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKDAEVPIILAI 287
Query: 223 NKIDKPAADIERTKNMLLA------------QGITVEDLGGD-----------------I 253
NK DK AD E+ K LLA Q + V L GD +
Sbjct: 288 NKCDKTDADPEKVKKELLAYDVVCEEYGGDVQAVHVSALTGDNLMALAEATIALAEILEL 347
Query: 254 QAVPISALTGTNVDNLTEA---------IER---TKNMLLAQGIT------VEDLGGDI- 294
+A P + GT +++ T+ I+R K +L G + + D G I
Sbjct: 348 KADPTGPVEGTVIESFTDKGRGPVTTAIIQRGTLRKGSILVAGKSWAKVRLIFDENGKIL 407
Query: 295 ----QAVPISALTGTNVDNLTEAIV-------AQAEIMHLKADYG---GPVEAMIVESKF 340
++P+ + ++ + + I+ A+ I K++ G + I+E K
Sbjct: 408 NEAYPSMPVGIIGWRDLPSAGDEILEVESEPRAREVIEWRKSEQKEEKGKDDLKIMEEKR 467
Query: 341 DTHRGKLATALVQRGTLKKGAIVVAGQAWAK---VRSISRKTLINTALGTVQRT-SGTVK 396
H+ A + G+L W + ++ + RK QR K
Sbjct: 468 REHQEAHRKAREKYGSLH----------WKERSYIKFLERKQ---------QRPLKPKEK 508
Query: 397 ISLGFKINPFCPSGDVDGSVEALLDVFDTY-TSALCRLDIVHYGVTSTDQWRRYWTCSTP 455
+ + P GDVDGSVEA+L++ DTY S C L++VH+G
Sbjct: 509 VERQSNVLPIIIKGDVDGSVEAILNLLDTYDASHECELELVHFG---------------- 552
Query: 456 TRESKHGRIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAI 515
+GD+ S DV A F+ +
Sbjct: 553 -----------LGDI-------------------------------SENDVTFAETFDGV 570
Query: 516 IYTFNTTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQ 575
IY FN A + SA + GV +K +IY L+ED++EE+++ LPHT E +GEA++L
Sbjct: 571 IYGFNVEAGSAIQQSAAQKGVKIKLHKIIYHLIEDLQEELSSRLPHTLEEYPIGEASILA 630
Query: 576 MFLITDGKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKEL 635
F +T+GKKK+PVAGCR KG L+++ FKL+R +V+++G L S+KH K++++ IK +
Sbjct: 631 TFTVTEGKKKIPVAGCRVQKGQLERHKKFKLIRNGQVIWKGSLTSLKHHKDDISVIKTGM 690
Query: 636 ECGLRLEDPSIEFEPGDTIVCFVKNKVPQFTDWNPPGF 673
+CGL L++ +EF+PGD ++C+ +NKVP T W+ PGF
Sbjct: 691 DCGLSLDEEKVEFKPGDQVICYEENKVPTKTSWD-PGF 727
>sp|A7HZ93|IF2_PARL1 Translation initiation factor IF-2 OS=Parvibaculum lavamentivorans
(strain DS-1 / DSM 13023 / NCIMB 13966) GN=infB PE=3
SV=1
Length = 887
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 229/548 (41%), Positives = 307/548 (56%), Gaps = 60/548 (10%)
Query: 114 RPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDTPGH 173
R PVVT+MGHVDHGKT+LLD LR T V E GGITQHIGA+ V L SGE++TFLDTPGH
Sbjct: 386 RAPVVTVMGHVDHGKTSLLDALRKTDVAAGEAGGITQHIGAYQVNLSSGERITFLDTPGH 445
Query: 174 AAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAADIE 233
AAF++MR+RGA TDIVVLVVAADDGVM QT+E+I A+ A VP+IVAINK+DKP AD
Sbjct: 446 AAFTSMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAGVPMIVAINKMDKPEADPT 505
Query: 234 RTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDLGGD 293
R KN LL + VED GGD+ VPISA TG +D L
Sbjct: 506 RVKNELLQHEVVVEDFGGDVLTVPISAKTGMGLDKL------------------------ 541
Query: 294 IQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATALVQ 353
E I+ QAE++ ++A+ E +IVE+K D RG + T LVQ
Sbjct: 542 -----------------EETILLQAELLDIRANPDRAAEGIIVEAKLDRGRGPVGTVLVQ 584
Query: 354 RGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFCPSGDV 412
RGTLK G I+VAG W +VR+ LIN V+ +V + LG P +GDV
Sbjct: 585 RGTLKVGDIIVAGAEWGRVRA-----LINDRGENVESAGPSVPVEVLGLGGAP--EAGDV 637
Query: 413 DGSVEALLDVFD--TYTSALCRLDIVHY-GVTSTDQWRRYWTCSTPTRESKHGRIYLIGD 469
VE+ + Y L R V G TS DQ ++ K I + D
Sbjct: 638 ISVVESEGRAREVTAYRQRLQRDKRVGTGGRTSLDQ----MLSQLKEQDKKELPIVVKAD 693
Query: 470 VDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAKT 529
V GS EA++ + + ++H GVG V+ +DV LAT A I FN + A+
Sbjct: 694 VQGSAEAIVQALEKLGTDEVTARVLHVGVGGVTESDVTLATASRAPIIGFNVRANTQARD 753
Query: 530 SAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPVA 589
+A + GV ++ ++VIY LV+D+K ++ ML E LG A +L++F I+ K VA
Sbjct: 754 AARQAGVEIRYYSVIYDLVDDIKAAMSGMLSPELRETFLGNAEILEIFNISKTGK---VA 810
Query: 590 GCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEFE 649
GCR ++GV+++ + +L+R + V+ EGKL ++K K+EV ++ ECG+ E +
Sbjct: 811 GCRVTEGVVRRGSHVRLIRDDVVIHEGKLSTLKRFKDEVKEVQSGQECGMAFEGYQ-DMR 869
Query: 650 PGDTIVCF 657
GD I CF
Sbjct: 870 KGDVIECF 877
>sp|Q92SW4|IF2_RHIME Translation initiation factor IF-2 OS=Rhizobium meliloti (strain
1021) GN=infB PE=3 SV=1
Length = 889
Score = 359 bits (922), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 219/550 (39%), Positives = 306/550 (55%), Gaps = 57/550 (10%)
Query: 111 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDT 170
+ RPP+VTIMGHVDHGKT+LLD +R+ +VV E GGITQHIGA+ V ++G+++TF+DT
Sbjct: 385 MQSRPPIVTIMGHVDHGKTSLLDAIRHANVVAGEAGGITQHIGAYQVE-QNGQKITFIDT 443
Query: 171 PGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAA 230
PGHAAF+ MR+RGA TDI VLVVAADD VM QT+ESI A+ A VPIIVAINKIDKP+A
Sbjct: 444 PGHAAFTAMRARGAQATDIAVLVVAADDSVMPQTIESINHAKAAGVPIIVAINKIDKPSA 503
Query: 231 DIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDL 290
+ ++ + LL + VE +GG++ V +SA TN+D L EAI LL
Sbjct: 504 NPQKVRTELLQHEVFVESMGGEVLDVEVSAKNQTNLDKLLEAI------LL--------- 548
Query: 291 GGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATA 350
Q+EI+ LKA+ E +VE++ D RG +AT
Sbjct: 549 --------------------------QSEILDLKANPNRTAEGTVVEAELDRGRGAVATV 582
Query: 351 LVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFCPS 409
LVQ+GTL G I+VAG W +VR+ L+N V+ + + LG P
Sbjct: 583 LVQKGTLTPGQIIVAGDQWGRVRA-----LVNDKGEHVKAAGPSTPVEVLGLSGTPAA-- 635
Query: 410 GDVDGSVEALLDVFD--TYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLI 467
GD VE+ + Y L R V S + T T K + +
Sbjct: 636 GDRFAVVESESRAREISEYRQRLAREKAVARQSGSRGSLEQMMT-QLQTSGVKEFPLVIK 694
Query: 468 GDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAA 527
GDV GS+EA+ D + R IVH G G ++ +DV LA NA I FN + A
Sbjct: 695 GDVQGSIEAISGALDKLGTDEVRARIVHSGAGGITESDVSLAEASNAAIIGFNVRANKQA 754
Query: 528 KTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVP 587
+ ++E G+ ++ +N+IY LV+DVK ++ +L E LG A +L++F IT K
Sbjct: 755 RDASERAGIEIRYYNIIYDLVDDVKAAMSGLLSPERRETFLGNAEILEVFNITKVGK--- 811
Query: 588 VAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIE 647
VAGCR ++G +++ +LVR N V+ EGKL+++K K+EV+ ++ ECG+ E+ +
Sbjct: 812 VAGCRVTEGKVERGVGVRLVRDNVVIHEGKLKTLKRFKDEVSEVQSGQECGMAFENYE-D 870
Query: 648 FEPGDTIVCF 657
GDTI CF
Sbjct: 871 IRAGDTIECF 880
>sp|B9JYK6|IF2_AGRVS Translation initiation factor IF-2 OS=Agrobacterium vitis (strain
S4 / ATCC BAA-846) GN=infB PE=3 SV=1
Length = 926
Score = 359 bits (921), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 220/556 (39%), Positives = 303/556 (54%), Gaps = 61/556 (10%)
Query: 107 DPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVT 166
D ++ RPPVVTIMGHVDHGKT+LLD +R TSVV E GGITQHIGA+ V ++G ++T
Sbjct: 418 DAGEMVSRPPVVTIMGHVDHGKTSLLDAIRQTSVVSGEAGGITQHIGAYQVE-QNGHKIT 476
Query: 167 FLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKID 226
F+DTPGHAAF+ MR+RGA TDI +LVVAADD VM QT+ESI A+ A VPIIVAINKID
Sbjct: 477 FIDTPGHAAFTAMRARGAQATDIAILVVAADDSVMPQTIESIHHAKAANVPIIVAINKID 536
Query: 227 KPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGIT 286
K A+ E+ + LL + VE +GG++ V +SA N+D L EA+ LL
Sbjct: 537 KHEANPEKVRQQLLQHEVFVESMGGEVLDVEVSAKNKLNLDKLLEAV------LL----- 585
Query: 287 VEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGK 346
QAEI+ LKAD E +++E++ D RG
Sbjct: 586 ------------------------------QAEILDLKADPSRTAEGLVIEAQLDRGRGS 615
Query: 347 LATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINP 405
+AT LVQ+GTL+ G I+VAG W +VR+ L+N G V+ + + LG P
Sbjct: 616 VATVLVQKGTLRPGQIIVAGDQWGRVRA-----LVNDKGGHVKEAGPAMPVEVLGLSGTP 670
Query: 406 FCPSGDVDGSV--EALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGR 463
GD V EA Y L R + Q + +++
Sbjct: 671 AA--GDKFAVVESEARAREISEYRQRLAR---DKAAARQSGQRGSLEQMMSKLQDTGFKE 725
Query: 464 IYLI--GDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNT 521
L+ DV GSVEA++ D + R IVH G G ++ +D+ LA NA I FN
Sbjct: 726 FPLVIKADVQGSVEAIVAALDKLGTDEVRARIVHSGAGAITESDISLAEASNAAIIGFNV 785
Query: 522 TLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITD 581
+ A+ ++E G ++ +N+IY LV+DVK ++ +L E LG A +L++F IT
Sbjct: 786 RANVQARAASERTGTEIRYYNIIYDLVDDVKAAMSGLLSPERRETFLGNAEILEVFNITK 845
Query: 582 GKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRL 641
K VAGCR +G +++ A +LVR N V+ EGKL+++K K+EV + ECG+
Sbjct: 846 TGK---VAGCRVVEGKVERGAGVRLVRDNVVIHEGKLKTLKRFKDEVADVPMGQECGMAF 902
Query: 642 EDPSIEFEPGDTIVCF 657
E+ + GDTI CF
Sbjct: 903 ENYE-DIRAGDTIECF 917
>sp|A6WWW5|IF2_OCHA4 Translation initiation factor IF-2 OS=Ochrobactrum anthropi (strain
ATCC 49188 / DSM 6882 / NCTC 12168) GN=infB PE=3 SV=1
Length = 964
Score = 358 bits (920), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 221/556 (39%), Positives = 309/556 (55%), Gaps = 65/556 (11%)
Query: 109 SVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFL 168
+ L+ RPPVVTIMGHVDHGKT+LLD +R+ +VV E GGITQHIGA+ V ++G+++TF+
Sbjct: 458 AALVSRPPVVTIMGHVDHGKTSLLDAIRHANVVSGEAGGITQHIGAYQVE-QNGQKITFI 516
Query: 169 DTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKP 228
DTPGHAAF+ MR+RGA TDI +LVVAADD VM QT+ESI A+ A VPIIVAINKIDKP
Sbjct: 517 DTPGHAAFTAMRARGAQATDIAILVVAADDSVMPQTIESINHAKAAGVPIIVAINKIDKP 576
Query: 229 AADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVE 288
AAD ++ + L L + VE
Sbjct: 577 AADPQKVRTAL-----------------------------------------LQHDVFVE 595
Query: 289 DLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLA 348
+GG++ V +SA N+D L EAI+ QAEI+ LKAD E ++VE++ D RG +A
Sbjct: 596 SMGGEVLDVEVSAKNKLNLDKLLEAILLQAEILDLKADPSRTAEGVVVEAQLDRGRGSVA 655
Query: 349 TALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFC 407
T LVQ GTL G I+VAG W +VR+ L+N V+ + + LG + P
Sbjct: 656 TVLVQTGTLHPGDILVAGSEWGRVRA-----LVNDRGEHVKEAGPAMPVEVLGLQGTPQA 710
Query: 408 PSGDVDGSV--EALLDVFDTYTSALCRLDIV--HYGVT-STDQWRRYWTCSTPTRESKHG 462
GD V EA Y L R V G S +Q S +K
Sbjct: 711 --GDRFAVVANEAKAREIAEYRQRLARDKAVARQSGARGSLEQMMNQLQVSG----TKEF 764
Query: 463 RIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTT 522
+ + GDV GS+EA+ + D + R IVH G G ++ +DV LA NA I FN
Sbjct: 765 PLVIKGDVQGSIEAITNALDKLGTDEVRARIVHSGAGGITESDVSLAEASNAAIIGFNVR 824
Query: 523 LHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITD- 581
+ A+ +A++ G+ ++ +N+IY L++DVK ++ +L E LG A +L++F IT
Sbjct: 825 ANKQARDAADQQGIEIRYYNIIYDLIDDVKAAMSGLLSPERRETFLGNAEILEVFNITKV 884
Query: 582 GKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRL 641
GK VAGCR ++G +++ A +L+R N V+ EGKL+++K K+EV+ + ECG+
Sbjct: 885 GK----VAGCRVTEGKVERGAGVRLIRDNVVIHEGKLKTLKRFKDEVSEVPAGQECGMAF 940
Query: 642 EDPSIEFEPGDTIVCF 657
E+ + GD I F
Sbjct: 941 ENYD-DIRAGDVIEAF 955
>sp|Q8FXT2|IF2_BRUSU Translation initiation factor IF-2 OS=Brucella suis biovar 1
(strain 1330) GN=infB PE=3 SV=1
Length = 959
Score = 358 bits (919), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 220/556 (39%), Positives = 311/556 (55%), Gaps = 65/556 (11%)
Query: 109 SVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFL 168
S ++ RPPVVTIMGHVDHGKT+LLD +R+ +VV E GGITQHIGA+ V +++G+++TF+
Sbjct: 453 SAMVSRPPVVTIMGHVDHGKTSLLDAIRHANVVSGEAGGITQHIGAYQV-VQNGQKITFI 511
Query: 169 DTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKP 228
DTPGHAAF+ MR+RGA TDI +LVVAADD VM QT+ESI A+ A VPIIVAINKIDKP
Sbjct: 512 DTPGHAAFTAMRARGAQATDIAILVVAADDSVMPQTIESINHAKAAGVPIIVAINKIDKP 571
Query: 229 AADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVE 288
AAD ++ + LL + VE +GG++ V +SA N+D L +A+ LL
Sbjct: 572 AADPQKVRTALLQHEVFVESMGGEVLDVEVSAKNKINLDKLLDAV------LL------- 618
Query: 289 DLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLA 348
QAE++ LKAD E +++E++ D RG +A
Sbjct: 619 ----------------------------QAEMLDLKADPDRTAEGVVIEAQLDRGRGSVA 650
Query: 349 TALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFC 407
T L+Q+GTL G I+VAG W +VR+ L+N V+ + + LG + P
Sbjct: 651 TVLIQKGTLHPGDILVAGSEWGRVRA-----LVNDRGEHVKEAGPAMPVEILGLQGTPQA 705
Query: 408 PSGDVDGSV--EALLDVFDTYTSALCRLDIV--HYGVT-STDQWRRYWTCSTPTRESKHG 462
GD V EA Y L R V G S +Q S +K
Sbjct: 706 --GDRFAVVANEAKAREIAEYRQRLARDKAVARQSGARGSLEQMMNQLQVSG----TKEF 759
Query: 463 RIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTT 522
+ + GDV GS+EA+ + D + R IVH G G ++ +DV LA NA I FN
Sbjct: 760 PLVIKGDVQGSIEAITNALDKLGTDEVRARIVHSGAGGITESDVSLAEASNAAIIGFNVR 819
Query: 523 LHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITD- 581
+ A+ SAE+ G+ ++ +N+IY L++DVK ++ +L E LG A +L++F IT
Sbjct: 820 ANKQARDSAEQQGIEIRYYNIIYDLIDDVKAAMSGLLSPERRETFLGNAEILEVFNITKV 879
Query: 582 GKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRL 641
GK VAGCR ++G +++ A +L+R N V+ EGKL+++K K+EV + ECG+
Sbjct: 880 GK----VAGCRVTEGKVERGAGVRLIRDNVVIHEGKLKTLKRFKDEVAEVPSGQECGMAF 935
Query: 642 EDPSIEFEPGDTIVCF 657
E+ + GD I F
Sbjct: 936 ENYD-DIRAGDVIEAF 950
>sp|A6UF29|IF2_SINMW Translation initiation factor IF-2 OS=Sinorhizobium medicae (strain
WSM419) GN=infB PE=3 SV=1
Length = 885
Score = 358 bits (919), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 216/547 (39%), Positives = 304/547 (55%), Gaps = 57/547 (10%)
Query: 114 RPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDTPGH 173
RPP+VTIMGHVDHGKT+LLD +R+ +VV E GGITQHIGA+ V ++G+++TF+DTPGH
Sbjct: 384 RPPIVTIMGHVDHGKTSLLDAIRHANVVAGEAGGITQHIGAYQVE-QNGQKITFIDTPGH 442
Query: 174 AAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAADIE 233
AAF+ MR+RGA TDI +LVVAADD VM QT+ESI A+ A VPIIVAINKIDKP+AD +
Sbjct: 443 AAFTAMRARGAQATDIAILVVAADDSVMPQTIESINHAKAAGVPIIVAINKIDKPSADPQ 502
Query: 234 RTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDLGGD 293
+ + LL + VE +GG++ V +SA TN+D L E
Sbjct: 503 KVRTELLQHEVFVESMGGEVLDVEVSAKNQTNLDKLLE---------------------- 540
Query: 294 IQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATALVQ 353
AI+ Q+EI+ LKA+ E +VE++ D RG +AT LVQ
Sbjct: 541 -------------------AILLQSEILDLKANPNRTAEGTVVEAELDRGRGAVATVLVQ 581
Query: 354 RGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFCPSGDV 412
+GTL G I+VAG W +VR+ L+N V+ + + LG P GD
Sbjct: 582 KGTLTPGQIIVAGDQWGRVRA-----LVNDKGEHVKSAGPSTPVEVLGLSGTPAA--GDR 634
Query: 413 DGSVEALLDVFD--TYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLIGDV 470
VE+ + Y L R V S + T T K + + GDV
Sbjct: 635 FAVVESESRAREISEYRQRLAREKAVARQSGSRGSLEQMMT-QLQTSGVKEFPLVIKGDV 693
Query: 471 DGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAKTS 530
GS+EA+ + + R IVH G G ++ +DV LA NA I FN + A+ +
Sbjct: 694 QGSIEAISGALEKLGTDEVRARIVHSGAGGITESDVSLAEASNAAIIGFNVRANKQARDA 753
Query: 531 AEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPVAG 590
+E G+ ++ +N+IY LV+DVK ++ +L E LG A +L++F IT K VAG
Sbjct: 754 SERAGIEIRYYNIIYDLVDDVKAAMSGLLSPERRETFLGNAEILEVFNITKVGK---VAG 810
Query: 591 CRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEFEP 650
CR ++G +++ +LVR N V+ EGKL+++K K+EV+ ++ ECG+ E+ +
Sbjct: 811 CRVTEGKVERGVGVRLVRDNVVIHEGKLKTLKRFKDEVSEVQSGQECGMAFENYE-DIRA 869
Query: 651 GDTIVCF 657
GDTI CF
Sbjct: 870 GDTIECF 876
>sp|B0CK11|IF2_BRUSI Translation initiation factor IF-2 OS=Brucella suis (strain ATCC
23445 / NCTC 10510) GN=infB PE=3 SV=1
Length = 959
Score = 358 bits (919), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 220/556 (39%), Positives = 311/556 (55%), Gaps = 65/556 (11%)
Query: 109 SVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFL 168
S ++ RPPVVTIMGHVDHGKT+LLD +R+ +VV E GGITQHIGA+ V +++G+++TF+
Sbjct: 453 SAMVSRPPVVTIMGHVDHGKTSLLDAIRHANVVSGEAGGITQHIGAYQV-VQNGQKITFI 511
Query: 169 DTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKP 228
DTPGHAAF+ MR+RGA TDI +LVVAADD VM QT+ESI A+ A VPIIVAINKIDKP
Sbjct: 512 DTPGHAAFTAMRARGAQATDIAILVVAADDSVMPQTIESINHAKAAGVPIIVAINKIDKP 571
Query: 229 AADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVE 288
AAD ++ + LL + VE +GG++ V +SA N+D L +A+ LL
Sbjct: 572 AADPQKVRTALLQHEVFVESMGGEVLDVEVSAKNKINLDKLLDAV------LL------- 618
Query: 289 DLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLA 348
QAE++ LKAD E +++E++ D RG +A
Sbjct: 619 ----------------------------QAEMLDLKADPDRTAEGVVIEAQLDRGRGSVA 650
Query: 349 TALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFC 407
T L+Q+GTL G I+VAG W +VR+ L+N V+ + + LG + P
Sbjct: 651 TVLIQKGTLHPGDILVAGSEWGRVRA-----LVNDRGEHVKEAGPAMPVEILGLQGTPQA 705
Query: 408 PSGDVDGSV--EALLDVFDTYTSALCRLDIV--HYGVT-STDQWRRYWTCSTPTRESKHG 462
GD V EA Y L R V G S +Q S +K
Sbjct: 706 --GDRFAVVANEAKAREIAEYRQRLARDKAVARQSGARGSLEQMMNQLQVSG----TKEF 759
Query: 463 RIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTT 522
+ + GDV GS+EA+ + D + R IVH G G ++ +DV LA NA I FN
Sbjct: 760 PLVIKGDVQGSIEAITNALDKLGTDEVRARIVHSGAGGITESDVSLAEASNAAIIGFNVR 819
Query: 523 LHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITD- 581
+ A+ SAE+ G+ ++ +N+IY L++DVK ++ +L E LG A +L++F IT
Sbjct: 820 ANKQARDSAEQQGIEIRYYNIIYDLIDDVKAAMSGLLSPERRETFLGNAEILEVFNITKV 879
Query: 582 GKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRL 641
GK VAGCR ++G +++ A +L+R N V+ EGKL+++K K+EV + ECG+
Sbjct: 880 GK----VAGCRVTEGKVERGAGVRLIRDNVVIHEGKLKTLKRFKDEVAEVPSGQECGMAF 935
Query: 642 EDPSIEFEPGDTIVCF 657
E+ + GD I F
Sbjct: 936 ENYD-DIRAGDVIEAF 950
>sp|Q57AA0|IF2_BRUAB Translation initiation factor IF-2 OS=Brucella abortus biovar 1
(strain 9-941) GN=infB PE=3 SV=1
Length = 959
Score = 358 bits (919), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 220/556 (39%), Positives = 311/556 (55%), Gaps = 65/556 (11%)
Query: 109 SVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFL 168
S ++ RPPVVTIMGHVDHGKT+LLD +R+ +VV E GGITQHIGA+ V +++G+++TF+
Sbjct: 453 SAMVSRPPVVTIMGHVDHGKTSLLDAIRHANVVSGEAGGITQHIGAYQV-VQNGQKITFI 511
Query: 169 DTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKP 228
DTPGHAAF+ MR+RGA TDI +LVVAADD VM QT+ESI A+ A VPIIVAINKIDKP
Sbjct: 512 DTPGHAAFTAMRARGAQATDIAILVVAADDSVMPQTIESINHAKAAGVPIIVAINKIDKP 571
Query: 229 AADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVE 288
AAD ++ + LL + VE +GG++ V +SA N+D L +A+ LL
Sbjct: 572 AADPQKVRTALLQHEVFVESMGGEVLDVEVSAKNKINLDKLLDAV------LL------- 618
Query: 289 DLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLA 348
QAE++ LKAD E +++E++ D RG +A
Sbjct: 619 ----------------------------QAEMLDLKADPDRTAEGVVIEAQLDRGRGSVA 650
Query: 349 TALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFC 407
T L+Q+GTL G I+VAG W +VR+ L+N V+ + + LG + P
Sbjct: 651 TVLIQKGTLHPGDILVAGSEWGRVRA-----LVNDRGEHVKEAGPAMPVEILGLQGTPQA 705
Query: 408 PSGDVDGSV--EALLDVFDTYTSALCRLDIV--HYGVT-STDQWRRYWTCSTPTRESKHG 462
GD V EA Y L R V G S +Q S +K
Sbjct: 706 --GDRFAVVANEAKAREIAEYRQRLARDKAVARQSGARGSLEQMMNQLQVSG----TKEF 759
Query: 463 RIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTT 522
+ + GDV GS+EA+ + D + R IVH G G ++ +DV LA NA I FN
Sbjct: 760 PLVIKGDVQGSIEAITNALDKLGTDEVRARIVHSGAGGITESDVSLAEASNAAIIGFNVR 819
Query: 523 LHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITD- 581
+ A+ SAE+ G+ ++ +N+IY L++DVK ++ +L E LG A +L++F IT
Sbjct: 820 ANKQARDSAEQQGIEIRYYNIIYDLIDDVKAAMSGLLSPERRETFLGNAEILEVFNITKV 879
Query: 582 GKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRL 641
GK VAGCR ++G +++ A +L+R N V+ EGKL+++K K+EV + ECG+
Sbjct: 880 GK----VAGCRVTEGKVERGAGVRLIRDNVVIHEGKLKTLKRFKDEVAEVPSGQECGMAF 935
Query: 642 EDPSIEFEPGDTIVCF 657
E+ + GD I F
Sbjct: 936 ENYD-DIRAGDVIEAF 950
>sp|Q2YQR7|IF2_BRUA2 Translation initiation factor IF-2 OS=Brucella abortus (strain
2308) GN=infB PE=3 SV=1
Length = 959
Score = 358 bits (919), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 220/556 (39%), Positives = 311/556 (55%), Gaps = 65/556 (11%)
Query: 109 SVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFL 168
S ++ RPPVVTIMGHVDHGKT+LLD +R+ +VV E GGITQHIGA+ V +++G+++TF+
Sbjct: 453 SAMVSRPPVVTIMGHVDHGKTSLLDAIRHANVVSGEAGGITQHIGAYQV-VQNGQKITFI 511
Query: 169 DTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKP 228
DTPGHAAF+ MR+RGA TDI +LVVAADD VM QT+ESI A+ A VPIIVAINKIDKP
Sbjct: 512 DTPGHAAFTAMRARGAQATDIAILVVAADDSVMPQTIESINHAKAAGVPIIVAINKIDKP 571
Query: 229 AADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVE 288
AAD ++ + LL + VE +GG++ V +SA N+D L +A+ LL
Sbjct: 572 AADPQKVRTALLQHEVFVESMGGEVLDVEVSAKNKINLDKLLDAV------LL------- 618
Query: 289 DLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLA 348
QAE++ LKAD E +++E++ D RG +A
Sbjct: 619 ----------------------------QAEMLDLKADPDRTAEGVVIEAQLDRGRGSVA 650
Query: 349 TALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFC 407
T L+Q+GTL G I+VAG W +VR+ L+N V+ + + LG + P
Sbjct: 651 TVLIQKGTLHPGDILVAGSEWGRVRA-----LVNDRGEHVKEAGPAMPVEILGLQGTPQA 705
Query: 408 PSGDVDGSV--EALLDVFDTYTSALCRLDIV--HYGVT-STDQWRRYWTCSTPTRESKHG 462
GD V EA Y L R V G S +Q S +K
Sbjct: 706 --GDRFAVVANEAKAREIAEYRQRLARDKAVARQSGARGSLEQMMNQLQVSG----TKEF 759
Query: 463 RIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTT 522
+ + GDV GS+EA+ + D + R IVH G G ++ +DV LA NA I FN
Sbjct: 760 PLVIKGDVQGSIEAITNALDKLGTDEVRARIVHSGAGGITESDVSLAEASNAAIIGFNVR 819
Query: 523 LHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITD- 581
+ A+ SAE+ G+ ++ +N+IY L++DVK ++ +L E LG A +L++F IT
Sbjct: 820 ANKQARDSAEQQGIEIRYYNIIYDLIDDVKAAMSGLLSPERRETFLGNAEILEVFNITKV 879
Query: 582 GKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRL 641
GK VAGCR ++G +++ A +L+R N V+ EGKL+++K K+EV + ECG+
Sbjct: 880 GK----VAGCRVTEGKVERGAGVRLIRDNVVIHEGKLKTLKRFKDEVAEVPSGQECGMAF 935
Query: 642 EDPSIEFEPGDTIVCF 657
E+ + GD I F
Sbjct: 936 ENYD-DIRAGDVIEAF 950
>sp|Q8YEB3|IF2_BRUME Translation initiation factor IF-2 OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=infB PE=3 SV=2
Length = 959
Score = 358 bits (918), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 220/556 (39%), Positives = 311/556 (55%), Gaps = 65/556 (11%)
Query: 109 SVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFL 168
S ++ RPPVVTIMGHVDHGKT+LLD +R+ +VV E GGITQHIGA+ V +++G+++TF+
Sbjct: 453 SAMVSRPPVVTIMGHVDHGKTSLLDAIRHANVVSGEAGGITQHIGAYQV-VQNGQKITFI 511
Query: 169 DTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKP 228
DTPGHAAF+ MR+RGA TDI +LVVAADD VM QT+ESI A+ A VPIIVAINKIDKP
Sbjct: 512 DTPGHAAFTAMRARGAQATDIAILVVAADDSVMPQTIESINHAKAAGVPIIVAINKIDKP 571
Query: 229 AADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVE 288
AAD ++ + LL + VE +GG++ V +SA N+D L +A+ LL
Sbjct: 572 AADPQKVRTALLQHEVFVESMGGEVLDVEVSAKNKINLDKLLDAV------LL------- 618
Query: 289 DLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLA 348
QAE++ LKAD E +++E++ D RG +A
Sbjct: 619 ----------------------------QAEMLDLKADPDRTAEGVVIEAQLDRGRGSVA 650
Query: 349 TALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFC 407
T L+Q+GTL G I+VAG W +VR+ L+N V+ + + LG + P
Sbjct: 651 TVLIQKGTLHPGDILVAGSEWGRVRA-----LVNDRGEHVKEAGPAMPVEILGLQGTPQA 705
Query: 408 PSGDVDGSV--EALLDVFDTYTSALCRLDIV--HYGVT-STDQWRRYWTCSTPTRESKHG 462
GD V EA Y L R V G S +Q S +K
Sbjct: 706 --GDRFAVVANEAKAREIAEYRQRLARDKAVARQSGARGSLEQMMNQLQVSG----TKEF 759
Query: 463 RIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTT 522
+ + GDV GS+EA+ + D + R IVH G G ++ +DV LA NA I FN
Sbjct: 760 PLVIKGDVQGSIEAITNALDKLGTDEVRARIVHSGAGGITESDVSLAEASNAAIIGFNVR 819
Query: 523 LHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITD- 581
+ A+ SAE+ G+ ++ +N+IY L++DVK ++ +L E LG A +L++F IT
Sbjct: 820 ANKQARDSAEQQGIEIRYYNIIYDLIDDVKAAMSGLLSPERRETFLGNAEILEVFNITKV 879
Query: 582 GKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRL 641
GK VAGCR ++G +++ A +L+R N V+ EGKL+++K K+EV + ECG+
Sbjct: 880 GK----VAGCRVTEGKVERGAGVRLIRDNVVIHEGKLKTLKRFKDEVAEVPSGQECGMAF 935
Query: 642 EDPSIEFEPGDTIVCF 657
E+ + GD I F
Sbjct: 936 ENYD-DIRAGDVIEAF 950
>sp|A9M9Z4|IF2_BRUC2 Translation initiation factor IF-2 OS=Brucella canis (strain ATCC
23365 / NCTC 10854) GN=infB PE=3 SV=1
Length = 959
Score = 357 bits (916), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 220/556 (39%), Positives = 310/556 (55%), Gaps = 65/556 (11%)
Query: 109 SVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFL 168
S + RPPVVTIMGHVDHGKT+LLD +R+ +VV E GGITQHIGA+ V +++G+++TF+
Sbjct: 453 SATVSRPPVVTIMGHVDHGKTSLLDAIRHANVVSGEAGGITQHIGAYQV-VQNGQKITFI 511
Query: 169 DTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKP 228
DTPGHAAF+ MR+RGA TDI +LVVAADD VM QT+ESI A+ A VPIIVAINKIDKP
Sbjct: 512 DTPGHAAFTAMRARGAQATDIAILVVAADDSVMPQTIESINHAKAAGVPIIVAINKIDKP 571
Query: 229 AADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVE 288
AAD ++ + LL + VE +GG++ V +SA N+D L +A+ LL
Sbjct: 572 AADPQKVRTALLQHEVFVESMGGEVLDVEVSAKNKINLDKLLDAV------LL------- 618
Query: 289 DLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLA 348
QAE++ LKAD E +++E++ D RG +A
Sbjct: 619 ----------------------------QAEMLDLKADPDRTAEGVVIEAQLDRGRGSVA 650
Query: 349 TALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFC 407
T L+Q+GTL G I+VAG W +VR+ L+N V+ + + LG + P
Sbjct: 651 TVLIQKGTLHPGDILVAGSEWGRVRA-----LVNDRGEHVKEAGPAMPVEILGLQGTPQA 705
Query: 408 PSGDVDGSV--EALLDVFDTYTSALCRLDIV--HYGVT-STDQWRRYWTCSTPTRESKHG 462
GD V EA Y L R V G S +Q S +K
Sbjct: 706 --GDRFAVVANEAKAREIAEYRQRLARDKAVARQSGARGSLEQMMNQLQVSG----TKEF 759
Query: 463 RIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTT 522
+ + GDV GS+EA+ + D + R IVH G G ++ +DV LA NA I FN
Sbjct: 760 PLVIKGDVQGSIEAITNALDKLGTDEVRARIVHSGAGGITESDVSLAEASNAAIIGFNVR 819
Query: 523 LHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITD- 581
+ A+ SAE+ G+ ++ +N+IY L++DVK ++ +L E LG A +L++F IT
Sbjct: 820 ANKQARNSAEQQGIEIRYYNIIYDLIDDVKAAMSGLLSPERRETFLGNAEILEVFNITKV 879
Query: 582 GKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRL 641
GK VAGCR ++G +++ A +L+R N V+ EGKL+++K K+EV + ECG+
Sbjct: 880 GK----VAGCRVTEGKVERGAGVRLIRDNVVIHEGKLKTLKRFKDEVAEVPSGQECGMAF 935
Query: 642 EDPSIEFEPGDTIVCF 657
E+ + GD I F
Sbjct: 936 ENYD-DIRAGDVIEAF 950
>sp|A5VTB2|IF2_BRUO2 Translation initiation factor IF-2 OS=Brucella ovis (strain ATCC
25840 / 63/290 / NCTC 10512) GN=infB PE=3 SV=2
Length = 959
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 220/556 (39%), Positives = 311/556 (55%), Gaps = 65/556 (11%)
Query: 109 SVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFL 168
S ++ RPPVVTIMGHVDHGKT+LLD +R+ +VV E GGITQHIGA+ V +++G+++TF+
Sbjct: 453 SAMVSRPPVVTIMGHVDHGKTSLLDAIRHANVVSGEAGGITQHIGAYQV-VQNGQKITFI 511
Query: 169 DTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKP 228
DTPGHAAF+ MR+RGA TDI +LVVAADD VM QT+ESI A+ A VPIIVAINKIDKP
Sbjct: 512 DTPGHAAFTAMRARGAQATDIAILVVAADDSVMPQTIESINHAKAAGVPIIVAINKIDKP 571
Query: 229 AADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVE 288
AAD ++ LL + VE +GG++ V +SA N+D L +A+ LL
Sbjct: 572 AADPQKVCTALLQHEVFVESMGGEVLDVEVSAKNKINLDKLLDAV------LL------- 618
Query: 289 DLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLA 348
QAE++ LKAD E +++E++ D RG +A
Sbjct: 619 ----------------------------QAEMLDLKADPDRTAEGVVIEAQLDRGRGSVA 650
Query: 349 TALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFC 407
T L+Q+GTL G I+VAG W +VR+ L+N V+ + + LG + P
Sbjct: 651 TVLIQKGTLHPGDILVAGSEWGRVRA-----LVNDRGEHVKEAGPAMPVEILGLQGTPQA 705
Query: 408 PSGDVDGSV--EALLDVFDTYTSALCRLDIV--HYGVT-STDQWRRYWTCSTPTRESKHG 462
GD V EA Y L R V G S +Q S +K
Sbjct: 706 --GDRFAVVANEAKAREIAEYRQRLARDKAVARQSGARGSLEQMMNQLQVSG----TKEF 759
Query: 463 RIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTT 522
+ + GDV GS+EA+++ D + R IVH G G ++ +DV LA NA I FN
Sbjct: 760 PLVIKGDVQGSIEAIINALDKLGTDEVRARIVHSGAGGITESDVSLAEASNAAIIGFNVR 819
Query: 523 LHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITD- 581
+ A+ SAE+ G+ ++ +N+IY L++DVK ++ +L E LG A +L++F IT
Sbjct: 820 ANKQARDSAEQQGIEIRYYNIIYDLIDDVKAAMSGLLSPERRETFLGNAEILEVFNITKV 879
Query: 582 GKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRL 641
GK VAGCR ++G +++ A +L+R N V+ EGKL+++K K+EV + ECG+
Sbjct: 880 GK----VAGCRVTEGKVERGAGVRLIRDNVVIHEGKLKTLKRFKDEVAEVPSGQECGMAF 935
Query: 642 EDPSIEFEPGDTIVCF 657
E+ + GD I F
Sbjct: 936 ENYD-DIRAGDVIEAF 950
>sp|Q11BC8|IF2_MESSB Translation initiation factor IF-2 OS=Mesorhizobium sp. (strain
BNC1) GN=infB PE=3 SV=1
Length = 856
Score = 356 bits (913), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 220/555 (39%), Positives = 308/555 (55%), Gaps = 61/555 (10%)
Query: 108 PSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTF 167
P L RPPVVTIMGHVDHGKT+LLD +R +VV E GGITQHIGA+ V + G +TF
Sbjct: 349 PEDLKPRPPVVTIMGHVDHGKTSLLDAIRKANVVAGEAGGITQHIGAYQVE-QDGNTITF 407
Query: 168 LDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDK 227
+DTPGHAAF+ MR+RGA TDI +LVVAADD VM QTVESI A+ A VPIIVAINKIDK
Sbjct: 408 IDTPGHAAFTAMRARGAQATDIAILVVAADDSVMPQTVESINHAKAAGVPIIVAINKIDK 467
Query: 228 PAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITV 287
P A+ ++ + LL + VE +GGD+ V +SA+ GTN+D L EAI LL
Sbjct: 468 PDANPQKVRTELLQHEVFVESMGGDVLDVEVSAIKGTNLDKLLEAI------LL------ 515
Query: 288 EDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKL 347
QAEI+ LKA+ E ++VE+K D RG +
Sbjct: 516 -----------------------------QAEILELKANPDRTAEGVVVEAKLDRGRGSV 546
Query: 348 ATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPF 406
AT LVQ GTLK G ++VAG W +VR+ L+N V+ + + LG + P
Sbjct: 547 ATVLVQAGTLKPGDVIVAGSEWGRVRA-----LVNERGEAVKVAPPSTPVEVLGLQGPP- 600
Query: 407 CPSGDVDGSV--EALLDVFDTYTSALCRLDIV--HYGVTSTDQWRRYWTCSTPTRESKHG 462
+GD V EA Y R V G + + S+ +E
Sbjct: 601 -QAGDRFAVVDTEARAREISEYRQRKAREKAVARQAGQRGSLEQMMSQLQSSGMKEFP-- 657
Query: 463 RIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTT 522
+ + GDV GS+EA+++ + + R IVH G G ++ +D+ LA +A I FN
Sbjct: 658 -LIIKGDVQGSIEAIVNALEKLGTEEVRARIVHSGAGAITESDISLAETSDAAIIGFNVR 716
Query: 523 LHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDG 582
+ A+ +AE+ G+ ++ +N+IY LV+D+K ++ +L E LG A +L++F IT
Sbjct: 717 ANKQARDAAEQAGIEIRYYNIIYDLVDDIKAAMSGLLSPERRETFLGNAEILEVFNITKV 776
Query: 583 KKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLE 642
K VAGCR ++G +++ A +L+R N V+ EGKL+++K K+EV+ + ECG+ E
Sbjct: 777 GK---VAGCRVTEGKVERGAGVRLIRDNVVIHEGKLKTLKRFKDEVSEVPAGQECGMAFE 833
Query: 643 DPSIEFEPGDTIVCF 657
+ + GD I F
Sbjct: 834 NYE-DIRVGDVIEAF 847
>sp|Q8UJ51|IF2_AGRT5 Translation initiation factor IF-2 OS=Agrobacterium tumefaciens
(strain C58 / ATCC 33970) GN=infB PE=3 SV=1
Length = 913
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 217/554 (39%), Positives = 301/554 (54%), Gaps = 57/554 (10%)
Query: 107 DPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVT 166
D ++ RPPVVTIMGHVDHGKT+LLD +R +VV E GGITQHIGA+ V K+G ++T
Sbjct: 405 DEGEMVSRPPVVTIMGHVDHGKTSLLDAIRQANVVSGEAGGITQHIGAYQVE-KNGHKIT 463
Query: 167 FLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKID 226
F+DTPGHAAF+ MR+RGA TDI VLVVAADD VM QT+ESI A+ A VPI+VAINKID
Sbjct: 464 FIDTPGHAAFTAMRARGAQATDIAVLVVAADDSVMPQTIESINHAKAAGVPIVVAINKID 523
Query: 227 KPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGIT 286
K A+ ++ + LL + VE +GG++ V +SA N+D L E
Sbjct: 524 KHEANPDKVRQQLLQHEVFVESMGGEVLDVEVSAKNKLNLDKLLE--------------- 568
Query: 287 VEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGK 346
AI+ QAEI+ LKAD E ++E++ D RG
Sbjct: 569 --------------------------AILLQAEILDLKADPSRTAEGTVIEAELDRGRGA 602
Query: 347 LATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINP 405
+AT LVQ+GTLK G I+VAG W +VR+ L+N V+ + + LG P
Sbjct: 603 VATVLVQKGTLKPGQIIVAGDQWGRVRA-----LVNDKGDHVKEAGPAMPVEILGLSGTP 657
Query: 406 FCPSGDVDGSV--EALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGR 463
+GD V E+ Y L R V + + T K
Sbjct: 658 --SAGDRFAVVENESRAREISEYRQRLARDKAVARQTGQRGSLEQMMS-QLQTSGLKEFP 714
Query: 464 IYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTL 523
+ + DV GSVEA++ D + R +VH G G ++ +D+ LA NA I FN
Sbjct: 715 LVIKADVQGSVEAIIASLDKLGTDEVRARVVHSGAGAITESDISLAEASNAAIIGFNVRA 774
Query: 524 HPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGK 583
+ A+T++E G+ ++ +N+IY LV+DVK ++ +L E LG A +L++F IT
Sbjct: 775 NAQARTASERAGIEIRYYNIIYDLVDDVKAAMSGLLSPERRETFLGNAEILEVFNITKVG 834
Query: 584 KKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLED 643
K VAGCR +G +++ A +LVR N V+ EGKL+++K K+EV + ECG+ E+
Sbjct: 835 K---VAGCRVVEGKVERGAGVRLVRDNVVIHEGKLKTLKRFKDEVNEVPVGQECGMAFEN 891
Query: 644 PSIEFEPGDTIVCF 657
+ GDTI CF
Sbjct: 892 YE-DIRAGDTIECF 904
>sp|A8GNW1|IF2_RICAH Translation initiation factor IF-2 OS=Rickettsia akari (strain
Hartford) GN=infB PE=3 SV=1
Length = 829
Score = 353 bits (906), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 225/572 (39%), Positives = 309/572 (54%), Gaps = 75/572 (13%)
Query: 99 DVERRPPADPSV--LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFV 156
DVE +D V L R PVVT+MGHVDHGKT+LLD L++T + SE GGITQHIGA+
Sbjct: 311 DVENVLISDDKVEDLRMRAPVVTVMGHVDHGKTSLLDALKSTDIAASETGGITQHIGAYR 370
Query: 157 VTLKSGEQVTFLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKV 216
VTL G +TF+DTPGH AFS MRSRGA TDIV++VVAADDG+ QTVESI A+ A V
Sbjct: 371 VTLADGRAITFIDTPGHEAFSEMRSRGAKVTDIVIIVVAADDGIKTQTVESINHAKAAGV 430
Query: 217 PIIVAINKIDKPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERT 276
PIIVAINKIDKP DIER KN L I E+ GGD+ +PISAL N++ L EAI
Sbjct: 431 PIIVAINKIDKPDIDIERVKNELYVHEIIGEEAGGDVMVIPISALKKINLEKLEEAI--- 487
Query: 277 KNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIV 336
LL AE+ LKA GP +++
Sbjct: 488 ---LLV-----------------------------------AEMKDLKASPFGPASGVVI 509
Query: 337 ESKFDTHRGKLATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRT-SGTV 395
ESK + RG L T LVQRGTL+ G I++AG ++ KV+ ++ + L V+ T S V
Sbjct: 510 ESKIEKGRGTLTTILVQRGTLRNGDIIIAGSSYGKVKKMTN----DKGLEIVEATPSVPV 565
Query: 396 KISLGFKINPFCPSGDVDGSVEALLDVFDTYTSALCRLDIVHY----------GVTSTDQ 445
+I G PF D F+ + DI Y +
Sbjct: 566 EIQ-GLNEVPFAG------------DKFNVVQNEKQAKDIAEYRMRLAKEKKISIAPRSS 612
Query: 446 WRRYWTCSTPTRESKHGRIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATD 505
+ ++ + K + + GDV GSVEA+L S +L I+H GVG ++ +D
Sbjct: 613 LEDLFLKASGNSKIKELPLIIKGDVQGSVEAILGSLLKLPSDAIKLRILHSGVGPITESD 672
Query: 506 VELATLFNAIIYTFNTTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAE 565
V LA +AII FN A T+AE+ V ++ +++IY L++DVK ++ ML E
Sbjct: 673 VSLAHASSAIIVGFNVRAGANALTAAEKEKVDIRYYSIIYNLIDDVKAIMSGMLDPIVRE 732
Query: 566 EVLGEANVLQMFLITDGKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLK 625
+ +G + Q+F IT K +AG +KG++K+ A +L+R N V+ EGKL+++K K
Sbjct: 733 QYIGSVEIRQIFNITKVGK---IAGSYVTKGIIKQGASVRLLRDNVVIHEGKLKTLKRFK 789
Query: 626 EEVTSIKKELECGLRLEDPSIEFEPGDTIVCF 657
+EV +++ ECG+ E+ + GDT+ F
Sbjct: 790 DEVKEVREGYECGIAFENYE-DIREGDTVEVF 820
>sp|A8IG20|IF2_AZOC5 Translation initiation factor IF-2 OS=Azorhizobium caulinodans
(strain ATCC 43989 / DSM 5975 / ORS 571) GN=infB PE=3
SV=1
Length = 1058
Score = 353 bits (906), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 221/560 (39%), Positives = 300/560 (53%), Gaps = 70/560 (12%)
Query: 108 PSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTF 167
P L+ RPPVVTIMGHVDHGKT+LLD+LR +VV E GGITQHIGA+ VT G ++TF
Sbjct: 550 PEDLLPRPPVVTIMGHVDHGKTSLLDSLRKANVVSGEAGGITQHIGAYQVTSPLGGKITF 609
Query: 168 LDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDK 227
+DTPGHAAF+ MR+RGA TDIVVLVVAADDGVM QTVE+I AR AKVP+IVAINKIDK
Sbjct: 610 IDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHARAAKVPLIVAINKIDK 669
Query: 228 PAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITV 287
P A ER ++ LL + VE +GGD V +SA N+D L EAI
Sbjct: 670 PDAKPERVRSELLQYEVQVESMGGDTLEVEVSATKQINLDKLLEAIS------------- 716
Query: 288 EDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKL 347
Q+E++ LKA+ P E +VE+K D RG +
Sbjct: 717 ----------------------------LQSEVLDLKANPDRPAEGTVVEAKLDRGRGPV 748
Query: 348 ATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPF 406
AT LVQRGTL+ G IVVAG + +VR+ LI T +V + LGF P
Sbjct: 749 ATVLVQRGTLRVGDIVVAGAEFGRVRA-----LITDTGATTTEAGPSVPVEVLGFNGTPE 803
Query: 407 CPSGDVDGSVEALLDVFD--------TYTSALCRLDIVHYGVTS-TDQWRRYWTCSTPTR 457
GD VE+ + A R +V + Q R P
Sbjct: 804 A--GDRLAVVESEARAREITEYRQRQKREKAAARSAVVRGSLEQMMSQVRSTGRKEFP-- 859
Query: 458 ESKHGRIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIY 517
+ + GDV GSVEA++ + + + I+H G G ++ +DV LA A I
Sbjct: 860 ------LIIKGDVSGSVEAIIGALEKLGNDEVQARIIHSGAGGINESDVTLAETSGAAII 913
Query: 518 TFNTTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMF 577
FN + A+ SAE G+ ++ +N+IY LV+DVK+ ++ +L E +LG A +L++F
Sbjct: 914 GFNVRANKEARDSAERAGIEIRYYNIIYDLVDDVKKAMSGLLAPITRETMLGNALILEIF 973
Query: 578 LITDGKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELEC 637
++ K VAGCR + G +++ +L+R N V+ EGKL ++ K+ V + EC
Sbjct: 974 NVSKVGK---VAGCRVTDGTVERGQHVRLIRDNVVIHEGKLATLNRFKDAVKEVLAGQEC 1030
Query: 638 GLRLEDPSIEFEPGDTIVCF 657
G+ E+ + GD I C+
Sbjct: 1031 GMSFENYQ-DMRAGDVIECY 1049
>sp|A1UU50|IF2_BARBK Translation initiation factor IF-2 OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=infB PE=3 SV=1
Length = 848
Score = 353 bits (905), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 214/555 (38%), Positives = 305/555 (54%), Gaps = 59/555 (10%)
Query: 107 DPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVT 166
DP + RPP+VTIMGHVDHGKT+LLD +R +VV SE GGITQHIGA+ V ++G+++T
Sbjct: 340 DPQKMKTRPPIVTIMGHVDHGKTSLLDAIRKANVVSSEAGGITQHIGAYQVE-QNGQKIT 398
Query: 167 FLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKID 226
F+DTPGHAAF+ MR+RGA TDI VLVVAADD VM QT+ESI A+ A VPIIVAINKID
Sbjct: 399 FIDTPGHAAFTAMRARGAQITDIAVLVVAADDSVMPQTIESINHAKAANVPIIVAINKID 458
Query: 227 KPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGIT 286
KP AD ++ + LL + VE +GG+ V +SA TG N+D L E
Sbjct: 459 KPTADAQKVRTELLQHEVFVETMGGETLEVEVSAKTGQNLDKLLE--------------- 503
Query: 287 VEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGK 346
AI+ QAEI+ LKAD + +++E+K D RG
Sbjct: 504 --------------------------AILLQAEILDLKADSERTADGIVIEAKLDQGRGS 537
Query: 347 LATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINP 405
+AT LVQ+GTL I+VAG W ++R+ LI+ ++ S + + LG + P
Sbjct: 538 VATVLVQKGTLHLSDIIVAGNEWGRIRA-----LIDDHGNHIKTASPSTPVEILGMQGTP 592
Query: 406 FCPSGDVDGSV--EALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGR 463
+GD V EA Y L R S + T T K
Sbjct: 593 --QAGDRFAVVAHEAKAREIAEYRQRLARDKAAARKTGSRSSLEQMMT-KLQTVGVKEFS 649
Query: 464 IYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTL 523
+ + GDV GS+EA+ + + + IVH G G ++ +D+ LA N+++ FN
Sbjct: 650 LIIKGDVQGSIEAITAALEKLGNEEVQTRIVHSGAGGITESDISLAETSNSVVIGFNVRA 709
Query: 524 HPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITD-G 582
+ + AE G+ ++ +N+IY LV+D+K ++ +L E LG A +L++F IT G
Sbjct: 710 NKQVRDLAETQGIEIRYYNIIYDLVDDIKAAMSGLLSPEKRETFLGNAEILEIFNITKIG 769
Query: 583 KKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLE 642
K VAGC+ ++G +++ A +L+R N V+ EGKL+++K K+EV ++ ECG+ E
Sbjct: 770 K----VAGCQVTEGKIERGAGVRLIRDNIVIHEGKLKTLKRFKDEVNEVQIGQECGIAFE 825
Query: 643 DPSIEFEPGDTIVCF 657
+ GDTI F
Sbjct: 826 KYE-DMRAGDTIEIF 839
>sp|A8LQ56|IF2_DINSH Translation initiation factor IF-2 OS=Dinoroseobacter shibae
(strain DFL 12) GN=infB PE=3 SV=1
Length = 832
Score = 353 bits (905), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 212/567 (37%), Positives = 317/567 (55%), Gaps = 73/567 (12%)
Query: 107 DPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVT 166
DP+ + RPPV+T+MGHVDHGKT+LLD +RN VV E GGITQHIGA+ VT G +++
Sbjct: 323 DPADMQPRPPVITVMGHVDHGKTSLLDAIRNAKVVAGEAGGITQHIGAYQVTTDDGTKLS 382
Query: 167 FLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKID 226
FLDTPGHAAF++MR+RGA TDIVVLVVAADD VM QT+E+I A+ AKVP+IVAINKID
Sbjct: 383 FLDTPGHAAFTSMRARGAQVTDIVVLVVAADDAVMPQTIEAINHAKAAKVPMIVAINKID 442
Query: 227 KPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGIT 286
+P A+ ++ + LL + VE L GD+Q V +SA+ GT +D L E+I
Sbjct: 443 RPEANPDKVRTDLLQHEVIVEKLSGDVQDVEVSAINGTGLDQLLESI------------- 489
Query: 287 VEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGK 346
AL QAEI+ LKA+ E ++E++ D RG
Sbjct: 490 --------------AL--------------QAEILELKANPDRAAEGAVIEAQLDVGRGP 521
Query: 347 LATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKISLGFKINPF 406
+AT LVQ+GTL++G I V G+ W KVR+ LIN V +V + + +N
Sbjct: 522 VATVLVQKGTLRRGDIFVVGEQWGKVRA-----LINDQGERVDEAGPSVPVEV-LGLNGT 575
Query: 407 CPSGDVDGSVEALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGR--- 463
+GDV L+V +T A +I Y ++ + R +T T E +
Sbjct: 576 PEAGDV-------LNVVETEAQA---REIAEYRESAAKEKRAAAGAAT-TLEQLMAKAKS 624
Query: 464 --------IYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAI 515
I + DV GS EA++ + + R+ ++H GVG ++ +D+ LA A
Sbjct: 625 DETVAELPIVVKADVQGSAEAIVQTMEKIGNEEVRVRVLHSGVGAITESDIGLAEASGAP 684
Query: 516 IYTFNTTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQ 575
++ FN + A+ +A++ GV ++ +++IY LV+DVK + +L E +G A + +
Sbjct: 685 VFGFNVRANAPARNAAQQKGVEIRYYSIIYDLVDDVKAAASGLLSAEVRENFIGYAEIRE 744
Query: 576 MFLITDGKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKEL 635
+F ++ K VAGC + G+ +++A +L+R N V+ EG L+++K K+EV ++
Sbjct: 745 VFKVSGVGK---VAGCLVTDGIARRSAGVRLLRDNVVIHEGTLKTLKRFKDEVKEVQSGQ 801
Query: 636 ECGLRLEDPSIEFEPGDTIVCFVKNKV 662
ECG+ E+ + PGD I F + +V
Sbjct: 802 ECGMAFENYD-DIRPGDVIEIFEREEV 827
>sp|A9IMT5|IF2_BART1 Translation initiation factor IF-2 OS=Bartonella tribocorum (strain
CIP 105476 / IBS 506) GN=infB PE=3 SV=1
Length = 842
Score = 352 bits (904), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 216/555 (38%), Positives = 305/555 (54%), Gaps = 59/555 (10%)
Query: 107 DPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVT 166
+P + RPPVVTIMGHVDHGKT+LLD +R +VV E GGITQHIGA+ V ++G+++T
Sbjct: 334 NPQNMQPRPPVVTIMGHVDHGKTSLLDAIRKANVVSGEAGGITQHIGAYQVE-QNGQKIT 392
Query: 167 FLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKID 226
F+DTPGHAAF+ MR+RGA TDI VLVVAADD VM QT+ESI A+ A VPIIVAINKID
Sbjct: 393 FIDTPGHAAFTAMRARGARVTDIAVLVVAADDSVMPQTIESINHAKAAGVPIIVAINKID 452
Query: 227 KPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGIT 286
KPAA+ ++ + LL + VE +GG+ V +SA TG N+D L E
Sbjct: 453 KPAANAQKVRTELLQHEVFVETMGGETLDVEVSAKTGQNLDKLLE--------------- 497
Query: 287 VEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGK 346
AI+ QAE++ LKAD E +++E+K D RG
Sbjct: 498 --------------------------AILLQAEMLDLKADPQRTAEGVVIEAKLDRGRGS 531
Query: 347 LATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINP 405
+AT LVQ+GTL I+VAG W +VR+ LI+ V+ + I LG + P
Sbjct: 532 VATVLVQKGTLHPSDIIVAGNEWGRVRA-----LIDDHGRHVKEAVPSTPIEILGMQGTP 586
Query: 406 FCPSGDVDGSV--EALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGR 463
+GD V EA Y L R V S + T T K
Sbjct: 587 --QAGDRFAVVTHEAKAREISEYRQRLARDKAVARQTGSRGSLEQMMT-KLQTTGVKEFS 643
Query: 464 IYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTL 523
+ + GDV GS+EA+ + + R +VH G G ++ +D+ LA N+ + FN
Sbjct: 644 LIIKGDVQGSIEAIASALEKLGNDEVRARVVHSGAGGITESDISLAEASNSAVIGFNVRA 703
Query: 524 HPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITD-G 582
+ A+ A+ G+ ++ +N+IY LV+D+K ++ +L E LG A +L++F IT G
Sbjct: 704 NKQARDFAKTQGIEIRYYNIIYDLVDDIKAAMSGLLSPEQRETFLGNAEILEVFNITKIG 763
Query: 583 KKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLE 642
K VAGCR ++G +++ A +L+R N V+ EGKL+++K K+EV ++ ECG+ E
Sbjct: 764 K----VAGCRVTEGKIERGAGVRLIRDNIVIHEGKLKTLKRFKDEVNEVQSGQECGIAFE 819
Query: 643 DPSIEFEPGDTIVCF 657
+ + GD I F
Sbjct: 820 NYE-DMRAGDIIETF 833
>sp|B8EIA7|IF2_METSB Translation initiation factor IF-2 OS=Methylocella silvestris
(strain BL2 / DSM 15510 / NCIMB 13906) GN=infB PE=3 SV=1
Length = 886
Score = 352 bits (903), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 217/550 (39%), Positives = 297/550 (54%), Gaps = 56/550 (10%)
Query: 111 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDT 170
L+ RPPVVTIMGHVDHGKT+LLD LR+ +VV E GGITQHIGA+ + +G +TF+DT
Sbjct: 381 LISRPPVVTIMGHVDHGKTSLLDALRHANVVSGEAGGITQHIGAYQIVASNGLPITFIDT 440
Query: 171 PGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAA 230
PGHAAF+ MR+RGA TDIVVLVVAADDGVM QT E+I A+ A VPIIVAINKIDKP A
Sbjct: 441 PGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTAEAISHAKAAGVPIIVAINKIDKPDA 500
Query: 231 DIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDL 290
ER + LL + VE LGGD V +SA N+D L DL
Sbjct: 501 KPERVRQELLQYEVQVESLGGDTLEVEVSATKKINLDKLA------------------DL 542
Query: 291 GGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATA 350
I QAE++ LKA P E ++E++ D RG +AT
Sbjct: 543 -----------------------IALQAELLDLKASPDRPAEGTVIEARLDKGRGPVATV 579
Query: 351 LVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFCPS 409
LVQRGTLK G ++V G W KVR++ +N Q ++ + LGF +P +
Sbjct: 580 LVQRGTLKVGDLIVGGSQWGKVRALIDDKGVNR-----QEAGPSMPVEVLGFSGSP--EA 632
Query: 410 GDVDGSV--EALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLI 467
GD G V EA Y R G + + T K + +
Sbjct: 633 GDRVGVVENEARAREIAAYRDRQKREQAAARGNLARGSLADMMS-QLKTAARKEFPLVIK 691
Query: 468 GDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAA 527
DV GS+EA++ + + I+H GVG ++ +DV LA A++ FN H
Sbjct: 692 ADVQGSLEAIVATLEKLNTDEVAARIIHAGVGGITESDVTLAEASGAVLIGFNVRAHKEG 751
Query: 528 KTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVP 587
+ AE+ G+ ++ +N+IY LV+DVK ++ +L T E++LG A +L++F I+ K
Sbjct: 752 RQLAEQQGLEIRYYNIIYNLVDDVKAAMSGLLAPTLREDMLGNAEILEVFHISKVGK--- 808
Query: 588 VAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIE 647
VAGCR + G +++ A +L+R N V+ EGKL ++K K+EV + ECG+ E +
Sbjct: 809 VAGCRVTDGRVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVVAGQECGMAFEHYQ-D 867
Query: 648 FEPGDTIVCF 657
GD I C+
Sbjct: 868 MRVGDVIECY 877
>sp|Q9AC25|IF2_CAUCR Translation initiation factor IF-2 OS=Caulobacter crescentus (strain
ATCC 19089 / CB15) GN=infB PE=3 SV=2
Length = 1009
Score = 352 bits (902), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 223/561 (39%), Positives = 307/561 (54%), Gaps = 64/561 (11%)
Query: 114 RPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDTPGH 173
RPPVVTIMGHVDHGKT+LLD LR+T V E GGITQHIGA+ V LK G++VTFLDTPGH
Sbjct: 506 RPPVVTIMGHVDHGKTSLLDALRSTDVAAGEAGGITQHIGAYQVRLKDGQRVTFLDTPGH 565
Query: 174 AAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAADIE 233
AAFS+MR+RGA+ TDIVVLVVA DDGVM QT+E+I+ A+ A+VPIIVA+NK+DKP +D
Sbjct: 566 AAFSSMRARGANITDIVVLVVAGDDGVMPQTIEAIKHAKAAEVPIIVAVNKMDKPGSDPT 625
Query: 234 RTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDLGGD 293
R N LL I VE LGGD Q + +SA T +DNL EAI LL
Sbjct: 626 RVVNELLQHEIVVESLGGDTQLIEVSAKARTGLDNLLEAI------LL------------ 667
Query: 294 IQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATALVQ 353
QAE++ LKA+ + +++E+K D RG ++T LV
Sbjct: 668 -----------------------QAEVLDLKANPDRSADGVVIEAKLDKGRGAVSTVLVN 704
Query: 354 RGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKISLGFKINPFCPSGDVD 413
RGTLK+G IVVAG W KVR+ L+N +Q + + ++ GD
Sbjct: 705 RGTLKRGDIVVAGSQWGKVRA-----LLNERNEQLQEAGPATPVEI-LGLDGVPSPGDAF 758
Query: 414 GSV--EALLDVFDTYTSALCR---LDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLIG 468
V EA Y L R + V G + D + ++ K + +
Sbjct: 759 AVVENEARARELTEYRIRLKREKSMAPVGAGASMADMMAKLQ-----DKKLKELPLVIKA 813
Query: 469 DVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAK 528
DV GS EA++ D + R I+ G G +S +DV LA A + FN A+
Sbjct: 814 DVQGSAEAIIGSLDKMATDEVRARIILSGAGAISESDVMLAKGAGAPVIGFNVRASAQAR 873
Query: 529 TSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITD-GKKKVP 587
AE GV ++ + +IY L++D+K ++ ML E LG A VLQ F I+ GK
Sbjct: 874 ALAEREGVEIRYYAIIYDLLDDIKGVLSGMLAPIQRETFLGNAEVLQAFDISKIGK---- 929
Query: 588 VAGCRCSKGVLKKNALFKLVRRNEVLFE-GKLESMKHLKEEVTSIKKELECGLRLEDPSI 646
VAGC+ ++GV++K A +++R++ V+ E G L+++K K+EV + ECG+
Sbjct: 930 VAGCKVTEGVVRKGAKVRIIRQDIVVLELGTLQTLKRFKDEVNEVPVGQECGMMFAG-FQ 988
Query: 647 EFEPGDTIVCFVKNKVPQFTD 667
+ + GDTI CF ++ + D
Sbjct: 989 DIKVGDTIECFTVEEIKRQLD 1009
>sp|A4YJE9|IF2_BRASO Translation initiation factor IF-2 OS=Bradyrhizobium sp. (strain
ORS278) GN=infB PE=3 SV=1
Length = 921
Score = 351 bits (901), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 222/548 (40%), Positives = 305/548 (55%), Gaps = 57/548 (10%)
Query: 114 RPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLK-SGEQVTFLDTPG 172
R PVVT+MGHVDHGKT+LLD LR+ +VV E GGITQHIGA+ VT SG+++TF+DTPG
Sbjct: 418 RSPVVTVMGHVDHGKTSLLDALRHANVVSGEAGGITQHIGAYQVTAPDSGKKITFIDTPG 477
Query: 173 HAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAADI 232
HAAF+ MR+RGA TDIVVLVVAADDGVM QT+E+I A+ AKVP+IVAINKIDKP A
Sbjct: 478 HAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKPDARP 537
Query: 233 ERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDLGG 292
ER + LL + VE LGGD+ V +SA TN+D L E I
Sbjct: 538 ERVRTELLQHEVQVESLGGDVVDVEVSAKNKTNLDRLLEMI------------------- 578
Query: 293 DIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATALV 352
AL QA+I+ LK + P E ++E+K D RG +AT LV
Sbjct: 579 --------AL--------------QADILDLKTNSDRPAEGTVIEAKLDRGRGPVATVLV 616
Query: 353 QRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFCPSGD 411
QRGTL+ G I+VAG +VR+ LI+ T+Q +V + LGF P GD
Sbjct: 617 QRGTLRVGDIIVAGAEMGRVRA-----LISDQGETLQEAGPSVPVEVLGFNGPPEA--GD 669
Query: 412 VDGSV--EALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLIGD 469
V EA +Y + R + ++ T K + + D
Sbjct: 670 RLAVVENEARARQVTSYRAHQKRENAA-ASISGMRGSLEQMMSQLKTAGRKEFPLVIKAD 728
Query: 470 VDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAKT 529
V GS+EA+L + + I+H GVG +S +DV LA FNA I F+ + A
Sbjct: 729 VQGSLEAILGSLEKLGTEEVAARILHAGVGGISESDVTLAEGFNAAIIGFSVRANKEAAA 788
Query: 530 SAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPVA 589
A+ G+ ++ +N+IY LV+DVK+ ++ +L T E +LG A +L++F I+ K VA
Sbjct: 789 LAKRNGIEIRYYNIIYDLVDDVKKAMSGLLAPTLRETMLGNAQILEVFNISKVGK---VA 845
Query: 590 GCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEFE 649
GCR + G +++ A +L+R N V+ EGKL ++K K+EV ++ ECG+ E+ +
Sbjct: 846 GCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKDVQAGQECGMAFENYG-DMR 904
Query: 650 PGDTIVCF 657
GD I C+
Sbjct: 905 VGDVIECY 912
>sp|A8GSP4|IF2_RICRS Translation initiation factor IF-2 OS=Rickettsia rickettsii (strain
Sheila Smith) GN=infB PE=3 SV=1
Length = 831
Score = 350 bits (899), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 223/572 (38%), Positives = 310/572 (54%), Gaps = 75/572 (13%)
Query: 99 DVERRPPADPSV--LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFV 156
DVE +D V L R PVVT+MGHVDHGKT+LLD L++T V E GGITQHIGA+
Sbjct: 313 DVENVLISDDKVEDLRTRAPVVTVMGHVDHGKTSLLDALKSTDVAAGELGGITQHIGAYR 372
Query: 157 VTLKSGEQVTFLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKV 216
VTL G +TF+DTPGH AFS MRSRGA TDIV++VVAADDG+ QTVE+I A+ A V
Sbjct: 373 VTLADGRAITFIDTPGHEAFSEMRSRGAKVTDIVIIVVAADDGIKTQTVEAINHAKAAGV 432
Query: 217 PIIVAINKIDKPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERT 276
PIIVAINKIDKP DIER KN L I E++GGD+ +PISAL N+D L EAI
Sbjct: 433 PIIVAINKIDKPDIDIERVKNELYVHEIIGEEVGGDVMIIPISALKKINLDKLEEAI--- 489
Query: 277 KNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIV 336
+L+ AE+ LKA+ G +++
Sbjct: 490 --LLI------------------------------------AEMQDLKANPFGSAAGVVI 511
Query: 337 ESKFDTHRGKLATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRT-SGTV 395
ESK + RG L T LVQRGTL+ I++AG A+ KV+ ++ + L V+ T S V
Sbjct: 512 ESKIEQGRGTLTTILVQRGTLRNSDIIIAGTAYGKVKKMTN----DKGLEIVEATPSVPV 567
Query: 396 KISLGFKINPFCPSGDVDGSVEALLDVFDTYTSALCRLDIVHY----------GVTSTDQ 445
+I G PF D F+ + DI Y +
Sbjct: 568 EIQ-GLNEVPFAG------------DKFNIVQNEKQAKDIAEYRMRLAKEKKISIAPRSS 614
Query: 446 WRRYWTCSTPTRESKHGRIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATD 505
+ ++ + K + + GDV GSVEA+ S +L I+H GVG ++ +D
Sbjct: 615 LEDLFLKASGNSKIKELPLIIKGDVQGSVEAISGSLLKLPSDEIKLRILHSGVGPITESD 674
Query: 506 VELATLFNAIIYTFNTTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAE 565
V LA +AII +FN A T+AE+ V ++ +++IY L++D+K ++ ML E
Sbjct: 675 VSLAHASSAIIVSFNVRAGANALTAAEKEKVDIRYYSIIYHLIDDIKAIMSGMLEPIVRE 734
Query: 566 EVLGEANVLQMFLITDGKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLK 625
+ +G A + Q+F IT K +AG +KG++KK A +L+R N V+ EGKL+++K K
Sbjct: 735 QYIGSAEIRQIFNITKVGK---IAGSYVTKGIIKKGAGVRLLRDNVVIHEGKLKTLKRFK 791
Query: 626 EEVTSIKKELECGLRLEDPSIEFEPGDTIVCF 657
+EV +++ ECG+ E+ + GDT+ F
Sbjct: 792 DEVKEVREGYECGIAFENYE-DIREGDTVEVF 822
>sp|B0BY61|IF2_RICRO Translation initiation factor IF-2 OS=Rickettsia rickettsii (strain
Iowa) GN=infB PE=3 SV=1
Length = 831
Score = 350 bits (899), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 223/572 (38%), Positives = 310/572 (54%), Gaps = 75/572 (13%)
Query: 99 DVERRPPADPSV--LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFV 156
DVE +D V L R PVVT+MGHVDHGKT+LLD L++T V E GGITQHIGA+
Sbjct: 313 DVENVLISDDKVEDLRTRAPVVTVMGHVDHGKTSLLDALKSTDVAAGELGGITQHIGAYR 372
Query: 157 VTLKSGEQVTFLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKV 216
VTL G +TF+DTPGH AFS MRSRGA TDIV++VVAADDG+ QTVE+I A+ A V
Sbjct: 373 VTLADGRAITFIDTPGHEAFSEMRSRGAKVTDIVIIVVAADDGIKTQTVEAINHAKAAGV 432
Query: 217 PIIVAINKIDKPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERT 276
PIIVAINKIDKP DIER KN L I E++GGD+ +PISAL N+D L EAI
Sbjct: 433 PIIVAINKIDKPDIDIERVKNELYVHEIIGEEVGGDVMIIPISALKKINLDKLEEAI--- 489
Query: 277 KNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIV 336
+L+ AE+ LKA+ G +++
Sbjct: 490 --LLI------------------------------------AEMQDLKANPFGSAAGVVI 511
Query: 337 ESKFDTHRGKLATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRT-SGTV 395
ESK + RG L T LVQRGTL+ I++AG A+ KV+ ++ + L V+ T S V
Sbjct: 512 ESKIEQGRGTLTTILVQRGTLRNSDIIIAGTAYGKVKKMTN----DKGLEIVEATPSVPV 567
Query: 396 KISLGFKINPFCPSGDVDGSVEALLDVFDTYTSALCRLDIVHY----------GVTSTDQ 445
+I G PF D F+ + DI Y +
Sbjct: 568 EIQ-GLNEVPFAG------------DKFNIVQNEKQAKDIAEYRMRLAKEKKISIAPRSS 614
Query: 446 WRRYWTCSTPTRESKHGRIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATD 505
+ ++ + K + + GDV GSVEA+ S +L I+H GVG ++ +D
Sbjct: 615 LEDLFLKASGNSKIKELPLIIKGDVQGSVEAISGSLLKLPSDEIKLRILHSGVGPITESD 674
Query: 506 VELATLFNAIIYTFNTTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAE 565
V LA +AII +FN A T+AE+ V ++ +++IY L++D+K ++ ML E
Sbjct: 675 VSLAHASSAIIVSFNVRAGANALTAAEKEKVDIRYYSIIYHLIDDIKAIMSGMLEPIVRE 734
Query: 566 EVLGEANVLQMFLITDGKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLK 625
+ +G A + Q+F IT K +AG +KG++KK A +L+R N V+ EGKL+++K K
Sbjct: 735 QYIGSAEIRQIFNITKVGK---IAGSYVTKGIIKKGAGVRLLRDNVVIHEGKLKTLKRFK 791
Query: 626 EEVTSIKKELECGLRLEDPSIEFEPGDTIVCF 657
+EV +++ ECG+ E+ + GDT+ F
Sbjct: 792 DEVKEVREGYECGIAFENYE-DIREGDTVEVF 822
>sp|Q1MN39|IF2_RHIL3 Translation initiation factor IF-2 OS=Rhizobium leguminosarum bv.
viciae (strain 3841) GN=infB PE=3 SV=1
Length = 917
Score = 350 bits (899), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 213/553 (38%), Positives = 301/553 (54%), Gaps = 63/553 (11%)
Query: 111 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDT 170
L+ RPPVVTIMGHVDHGKT+LLD +R+ +VV E GGITQHIGA+ V ++G+++TF+DT
Sbjct: 413 LVSRPPVVTIMGHVDHGKTSLLDAIRHANVVSGEAGGITQHIGAYQVE-QNGQKITFIDT 471
Query: 171 PGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAA 230
PGHAAF+ MR+RGA TDI +LVVAADD VM QT+ESI A+ A VPIIVAINK+DK A
Sbjct: 472 PGHAAFTAMRARGAQATDIAILVVAADDSVMPQTIESINHAKAAGVPIIVAINKVDKHEA 531
Query: 231 DIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDL 290
D ++ +N LL + VE +
Sbjct: 532 DPQKVRNQ-----------------------------------------LLQHEVFVESM 550
Query: 291 GGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATA 350
GG++ V +SA TG N+D L EAI+ QAEI+ LKA+ E ++E++ D RG +AT
Sbjct: 551 GGEVLDVEVSAKTGKNLDKLLEAILLQAEILDLKANANRTAEGTVIEAQLDRGRGSVATV 610
Query: 351 LVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFCPS 409
LVQ+GTL+ G I+VAG W +VR+ L+ V+ + LG P
Sbjct: 611 LVQKGTLRPGQIIVAGDVWGRVRA-----LVTDKGDHVKEAGPATPVEVLGLSGTPQA-- 663
Query: 410 GDVDGSVEALLDVFD--TYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRES---KHGRI 464
GD VE+ + Y L R R R+S K +
Sbjct: 664 GDKFAVVESESRAREISEYRQRLAR----DKAAARQSGQRGSLEQMMMQRQSVGIKEFPL 719
Query: 465 YLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLH 524
+ GDV GS+EA+ + + R IVH G G ++ +D+ LA NA I FN +
Sbjct: 720 VIKGDVQGSIEAIAGALEKLGTDEVRARIVHSGAGGITESDISLAEASNAAIIGFNVRAN 779
Query: 525 PAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKK 584
A+ AE G+ ++ +N+IY LV+DVK ++ +L E +G A +L++F IT K
Sbjct: 780 TQARQFAEREGIEIRYYNIIYDLVDDVKAAMSGLLSPERRETFIGNAEILEVFNITKVGK 839
Query: 585 KVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDP 644
VAGCR +G +++ A +L+R + V+ EGKL+++K K+EV+ + ECG+ E+
Sbjct: 840 ---VAGCRVVEGKVERGAGVRLIRNDVVVHEGKLKTLKRFKDEVSEVPMGQECGMAFENY 896
Query: 645 SIEFEPGDTIVCF 657
+ GD I CF
Sbjct: 897 E-DMRAGDVIECF 908
>sp|Q6G0P2|IF2_BARQU Translation initiation factor IF-2 OS=Bartonella quintana (strain
Toulouse) GN=infB PE=3 SV=1
Length = 845
Score = 350 bits (897), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 219/555 (39%), Positives = 303/555 (54%), Gaps = 59/555 (10%)
Query: 107 DPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVT 166
+P + RPPVVTIMGHVDHGKT+LLD +R +VV E GGITQHIGA+ V ++G+++T
Sbjct: 337 NPQKMQPRPPVVTIMGHVDHGKTSLLDAIRKANVVSGEAGGITQHIGAYQVE-QNGQKIT 395
Query: 167 FLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKID 226
F+DTPGHAAF+ MR+RGA TDI VLVVAADD VM QTVESI A+ A VPIIVAINKID
Sbjct: 396 FIDTPGHAAFTAMRARGARVTDIAVLVVAADDSVMPQTVESINHAKAAGVPIIVAINKID 455
Query: 227 KPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGIT 286
KPAAD ++ + LL + VE +GG+ V +SA TG N+ L E
Sbjct: 456 KPAADAQKVRTELLQHEVFVETMGGETLEVEVSAKTGQNLVKLLE--------------- 500
Query: 287 VEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGK 346
AI+ QAE++ LKAD E +++E+K D RG
Sbjct: 501 --------------------------AILLQAELLDLKADPKRTAEGVVIEAKLDRGRGS 534
Query: 347 LATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINP 405
+AT LVQ+GTL I+VAG W +VR+ LI+ V+ + I LG + P
Sbjct: 535 VATVLVQKGTLHPSDIIVAGNEWGRVRA-----LIDDHGRHVKEAVPSTPIEILGMQGTP 589
Query: 406 FCPSGDVDGSV--EALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGR 463
+GD V EA Y L R V S + T T K
Sbjct: 590 --QAGDRFAVVTHEAKAREIAEYRQRLARDKAVARQTGSRSSLEQMMT-KLQTTGIKEFP 646
Query: 464 IYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTL 523
+ + GDV GS+EA+ + + R IVH G G ++ +D+ LA N+ + FN
Sbjct: 647 LIVKGDVQGSIEAIASALEKLGNEEVRARIVHSGAGGITESDISLAEASNSAVIGFNVRA 706
Query: 524 HPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITD-G 582
+ A A+ G+ ++ +N+IY LV+D+K ++ +L E LG A +L++F IT G
Sbjct: 707 NKQACALAKTQGIEIRYYNIIYDLVDDIKAAMSGLLSPEQRETFLGNAEILEVFNITKIG 766
Query: 583 KKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLE 642
K VAGCR +G +++ A +L+R N V+ EGKL+++K K+EV ++ ECG+ E
Sbjct: 767 K----VAGCRVIEGKIERGAGVRLIRDNIVIHEGKLKTLKRFKDEVNEVQSGQECGIAFE 822
Query: 643 DPSIEFEPGDTIVCF 657
+ + GDTI F
Sbjct: 823 NYE-DIRAGDTIEIF 836
>sp|Q1RIX0|IF2_RICBR Translation initiation factor IF-2 OS=Rickettsia bellii (strain
RML369-C) GN=infB PE=3 SV=1
Length = 828
Score = 349 bits (895), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 218/559 (38%), Positives = 303/559 (54%), Gaps = 75/559 (13%)
Query: 111 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDT 170
L R PVVT+MGHVDHGKT+LLD L++T V E GGITQHIGA+ VTL G +TF+DT
Sbjct: 324 LRSRAPVVTVMGHVDHGKTSLLDALKSTDVASGETGGITQHIGAYRVTLADGRAITFIDT 383
Query: 171 PGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAA 230
PGH AFS MRSRGA TDIV++VVAADDG+ QTVE+I A+ A VPIIVAINKIDKP
Sbjct: 384 PGHEAFSEMRSRGAGVTDIVIIVVAADDGIKPQTVEAINHAKAANVPIIVAINKIDKPDI 443
Query: 231 DIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDL 290
DIER KN L I E+ GGD+ +PISAL N+D L EAI +L+
Sbjct: 444 DIERVKNELYMYEIIGEEAGGDVMVIPISALKKINLDKLEEAI-----LLI--------- 489
Query: 291 GGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATA 350
AE+ +LKA G +++ESK + RG L T
Sbjct: 490 ---------------------------AEMQNLKASPFGSASGVVIESKIEKGRGALTTM 522
Query: 351 LVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKISL-GFKINPFCPS 409
LVQRGTLK G I++AG A+ KV+ ++ I V + +V I + G P
Sbjct: 523 LVQRGTLKSGDIIIAGTAYGKVKKMTNDKGIE-----VLEATPSVPIEIQGLSHVPHAG- 576
Query: 410 GDVDGSVEALLDVFDTYTSALCRLDIVHY----------GVTSTDQWRRYWTCSTPTRES 459
D+F+ + DI Y + + ++ + +
Sbjct: 577 -----------DMFNVVQTEKQAKDIAEYRERVAKEKKISIAPRSSLEDLFLKASGSSKI 625
Query: 460 KHGRIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTF 519
K + + GDV GSVEA+ + +L I+H GVG ++ +DV LA +AII F
Sbjct: 626 KELPLIIKGDVHGSVEAIAGSLLKLPNDEVKLRILHSGVGPITESDVSLAHASSAIIVGF 685
Query: 520 NTTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLI 579
N AKT+AE+ V ++ +++IY L++DVK ++ ML E+ +G + Q+F I
Sbjct: 686 NVRAGANAKTAAEKEKVEIRYYSIIYDLLDDVKAIMSGMLDPIIREQYIGSVEIRQIFNI 745
Query: 580 TD-GKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECG 638
T GK +AG ++G++KK A +L+R N V+ EGKL+++K KEEV +++ ECG
Sbjct: 746 TKIGK----IAGSYVTRGIIKKGAGVRLLRDNIVIHEGKLKTLKRFKEEVKEVREGYECG 801
Query: 639 LRLEDPSIEFEPGDTIVCF 657
+ E+ + GDT+ F
Sbjct: 802 IAFENYE-DIREGDTVEVF 819
>sp|A8GW31|IF2_RICB8 Translation initiation factor IF-2 OS=Rickettsia bellii (strain OSU
85-389) GN=infB PE=3 SV=1
Length = 828
Score = 349 bits (895), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 218/559 (38%), Positives = 303/559 (54%), Gaps = 75/559 (13%)
Query: 111 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDT 170
L R PVVT+MGHVDHGKT+LLD L++T V E GGITQHIGA+ VTL G +TF+DT
Sbjct: 324 LRSRAPVVTVMGHVDHGKTSLLDALKSTDVASGETGGITQHIGAYRVTLADGRAITFIDT 383
Query: 171 PGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAA 230
PGH AFS MRSRGA TDIV++VVAADDG+ QTVE+I A+ A VPIIVAINKIDKP
Sbjct: 384 PGHEAFSEMRSRGAGVTDIVIIVVAADDGIKPQTVEAINHAKAANVPIIVAINKIDKPDI 443
Query: 231 DIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDL 290
DIER KN L I E+ GGD+ +PISAL N+D L EAI +L+
Sbjct: 444 DIERIKNELYMYEIIGEEAGGDVMVIPISALKKINLDKLEEAI-----LLI--------- 489
Query: 291 GGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATA 350
AE+ +LKA G +++ESK + RG L T
Sbjct: 490 ---------------------------AEMQNLKASPFGSASGVVIESKIEKGRGALTTM 522
Query: 351 LVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKISL-GFKINPFCPS 409
LVQRGTLK G I++AG A+ KV+ ++ I V + +V I + G P
Sbjct: 523 LVQRGTLKSGDIIIAGTAYGKVKKMTNDKGIE-----VLEATPSVPIEIQGLSHVPHAG- 576
Query: 410 GDVDGSVEALLDVFDTYTSALCRLDIVHY----------GVTSTDQWRRYWTCSTPTRES 459
D+F+ + DI Y + + ++ + +
Sbjct: 577 -----------DMFNVVQTEKQAKDIAEYRERVAKEKKISIAPRSSLEDLFLKASGSSKI 625
Query: 460 KHGRIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTF 519
K + + GDV GSVEA+ + +L I+H GVG ++ +DV LA +AII F
Sbjct: 626 KELPLIIKGDVHGSVEAIAGSLLKLPNDEVKLRILHSGVGPITESDVSLAHASSAIIVGF 685
Query: 520 NTTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLI 579
N AKT+AE+ V ++ +++IY L++DVK ++ ML E+ +G + Q+F I
Sbjct: 686 NVRAGANAKTAAEKEKVEIRYYSIIYDLLDDVKAIMSGMLDPIIREQYIGSVEIRQIFNI 745
Query: 580 TD-GKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECG 638
T GK +AG ++G++KK A +L+R N V+ EGKL+++K KEEV +++ ECG
Sbjct: 746 TKIGK----IAGSYVTRGIIKKGAGVRLLRDNIVIHEGKLKTLKRFKEEVKEVREGYECG 801
Query: 639 LRLEDPSIEFEPGDTIVCF 657
+ E+ + GDT+ F
Sbjct: 802 IAFENYE-DIREGDTVEVF 819
>sp|Q89WA9|IF2_BRAJA Translation initiation factor IF-2 OS=Bradyrhizobium japonicum
(strain USDA 110) GN=infB PE=3 SV=1
Length = 902
Score = 349 bits (895), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 223/548 (40%), Positives = 308/548 (56%), Gaps = 57/548 (10%)
Query: 114 RPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF-VVTLKSGEQVTFLDTPG 172
R PVVT+MGHVDHGKT+LLD LR+ +VV E GGITQHIGA+ VV+ +SG+++TF+DTPG
Sbjct: 399 RSPVVTVMGHVDHGKTSLLDALRHANVVSGEAGGITQHIGAYQVVSPESGKKITFIDTPG 458
Query: 173 HAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAADI 232
HAAF+ MR+RGA TDIVVLVVAADDGVM QTVE+I A+ A+VPIIVAINKIDKP A
Sbjct: 459 HAAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAARVPIIVAINKIDKPDAKP 518
Query: 233 ERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDLGG 292
ER + LL + VE GGD+ V +SA TN+D L E I
Sbjct: 519 ERVRTELLQHEVQVESFGGDVVDVEVSAKNKTNLDKLLEMI------------------- 559
Query: 293 DIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATALV 352
AL QA+I+ LK + P E ++E+K D RG +AT LV
Sbjct: 560 --------AL--------------QADILDLKTNSERPAEGTVIEAKLDRGRGPVATVLV 597
Query: 353 QRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFCPSGD 411
QRGTL+ G I+VAG +VR+ LI+ TVQ +V + LGF P +GD
Sbjct: 598 QRGTLRVGDIIVAGAEMGRVRA-----LISDQGETVQEAGPSVPVEVLGFNGPP--EAGD 650
Query: 412 VDGSV--EALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLIGD 469
V EA +Y + R + ++ T K + + D
Sbjct: 651 RLAVVENEARARQVTSYRAHQKRENAA-ASISGMRGSLEQMMSQLKTAGRKEFPLIIKAD 709
Query: 470 VDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAKT 529
V GS+EA+L + + I+H GVG +S +DV LA FNA I F+ + A
Sbjct: 710 VQGSLEAILGSLEKLGTDEVAARILHAGVGGISESDVTLAEGFNAAIIGFSVRANKEAAA 769
Query: 530 SAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPVA 589
+A+ G+ ++ +N+IY LV+DVK+ ++ +L T E +LG A +L++F I+ K VA
Sbjct: 770 AAKRNGIEIRYYNIIYDLVDDVKKAMSGLLAPTLRETMLGNAAILEIFNISKVGK---VA 826
Query: 590 GCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEFE 649
GCR + G +++ A +L+R N V+ EGKL ++K K+EV ++ ECG+ E+ +
Sbjct: 827 GCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVQSGQECGMAFENYH-DMR 885
Query: 650 PGDTIVCF 657
GD I C+
Sbjct: 886 AGDVIECY 893
>sp|Q2KDZ5|IF2_RHIEC Translation initiation factor IF-2 OS=Rhizobium etli (strain CFN 42
/ ATCC 51251) GN=infB PE=3 SV=1
Length = 916
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 213/549 (38%), Positives = 302/549 (55%), Gaps = 61/549 (11%)
Query: 114 RPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDTPGH 173
RPPVVTIMGHVDHGKT+LLD +R+ +VV E GGITQHIGA+ V ++G+++TF+DTPGH
Sbjct: 415 RPPVVTIMGHVDHGKTSLLDAIRHANVVAGEAGGITQHIGAYQVE-QNGQKITFIDTPGH 473
Query: 174 AAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAADIE 233
AAF+ MR+RGA TDI +LVVAADD VM QT+ESI A+ A VPIIVAINKIDK AD +
Sbjct: 474 AAFTAMRARGAQATDIAILVVAADDSVMPQTIESINHAKAAGVPIIVAINKIDKHEADPQ 533
Query: 234 RTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDLGGD 293
+ +N LL + VE +GG+ V +SA TG N+D L
Sbjct: 534 KVRNQLLQHEVFVESMGGETLDVEVSAKTGKNLDKL------------------------ 569
Query: 294 IQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATALVQ 353
EA++ QAEI+ LKA+ E ++E++ D RG +AT LVQ
Sbjct: 570 -----------------LEAVLLQAEILDLKANPNRTAEGTVIEAQLDRGRGAVATVLVQ 612
Query: 354 RGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFCPSGDV 412
GTLK G I+VAG W +VR+ L+N ++ + + LG P +GD
Sbjct: 613 NGTLKPGQIIVAGDVWGRVRA-----LVNDKGEHMKEAPPAMPVEVLGLSGTP--QAGDK 665
Query: 413 DGSVEALLDVFD--TYTSALCRLDIV--HYGVTSTDQWRRYWTCSTPTRESKHGRIYLIG 468
VE+ + Y L R G + + ST +E + + G
Sbjct: 666 FAVVESESRAREISEYRQRLARDKAAARQSGQRGSLEQMMTQMQSTGIKEFP---LVIKG 722
Query: 469 DVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAK 528
DV GS+EA+ + + R IVH G G ++ +D+ LA NA I FN + A+
Sbjct: 723 DVQGSIEAIAGALEKLGTDEVRARIVHLGAGGITESDISLAEASNAAIIGFNVRANAQAR 782
Query: 529 TSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPV 588
AE G+ ++ +N+IY LV+DVK ++ +L E +G A +L++F IT K V
Sbjct: 783 QFAERQGIEIRYYNIIYDLVDDVKAAMSGLLSPERRETFIGNAEILEVFNITKVGK---V 839
Query: 589 AGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEF 648
AGCR +G +++ A +L+R + V+ EGKL+++K K+EV+ + ECG+ E+ +
Sbjct: 840 AGCRVVEGKVERGAGVRLIRNDVVVHEGKLKTLKRFKDEVSEVPMGQECGMAFENYE-DM 898
Query: 649 EPGDTIVCF 657
GD I CF
Sbjct: 899 RVGDVIECF 907
>sp|Q92HF5|IF2_RICCN Translation initiation factor IF-2 OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=infB PE=3 SV=1
Length = 831
Score = 348 bits (893), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 223/572 (38%), Positives = 309/572 (54%), Gaps = 75/572 (13%)
Query: 99 DVERRPPADPSV--LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFV 156
DVE +D V L R PVVT+MGHVDHGKT+LLD+L++T + E GGITQHIGA+
Sbjct: 313 DVENVLISDDKVEDLRTRAPVVTVMGHVDHGKTSLLDSLKSTDIAAGELGGITQHIGAYR 372
Query: 157 VTLKSGEQVTFLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKV 216
VTL G +TF+DTPGH AFS MRSRGA TDIV++VVAADDG+ QTVE+I A+ A V
Sbjct: 373 VTLADGRAITFIDTPGHEAFSEMRSRGAKVTDIVIIVVAADDGIKTQTVEAINHAKAAGV 432
Query: 217 PIIVAINKIDKPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERT 276
PIIVAINKIDKP DIER KN L I E+ GGDI +PISAL N+D L EAI
Sbjct: 433 PIIVAINKIDKPDIDIERVKNELYVHEIIGEEAGGDIMIIPISALKKINLDKLEEAI--- 489
Query: 277 KNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIV 336
+L+ AE+ LKA+ G +++
Sbjct: 490 --LLI------------------------------------AEMQDLKANPFGSAAGVVI 511
Query: 337 ESKFDTHRGKLATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRT-SGTV 395
ESK + RG L T LVQRGTL+ I++AG A+ KV+ ++ + L V+ T S V
Sbjct: 512 ESKIEQGRGTLTTILVQRGTLRNSDIIIAGTAYGKVKKMTN----DKGLEIVEATPSVPV 567
Query: 396 KISLGFKINPFCPSGDVDGSVEALLDVFDTYTSALCRLDIVHY----------GVTSTDQ 445
+I G PF D F+ + DI Y +
Sbjct: 568 EIQ-GLNEVPFAG------------DKFNVVQNEKQAKDIAEYRMRLAKEKKISIAPRSS 614
Query: 446 WRRYWTCSTPTRESKHGRIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATD 505
+ ++ + K + + GDV GSVEA+ S +L I+H GVG ++ +D
Sbjct: 615 LEDLFLKASGNSKIKELPLIIKGDVQGSVEAISGSLLKLPSDEIKLRILHSGVGPITESD 674
Query: 506 VELATLFNAIIYTFNTTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAE 565
V LA +AII FN A T+AE+ V ++ +++IY L++D+K ++ ML E
Sbjct: 675 VSLAHASSAIIVGFNVRAGANALTAAEKEKVDIRYYSIIYHLIDDIKAIMSGMLDPIVRE 734
Query: 566 EVLGEANVLQMFLITDGKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLK 625
+ +G A + Q+F IT K +AG +KG++KK A +L+R N V+ EGKL+++K K
Sbjct: 735 QYIGSAEMRQIFNITKVGK---IAGSYVTKGIIKKGAGVRLLRDNVVIHEGKLKTLKRFK 791
Query: 626 EEVTSIKKELECGLRLEDPSIEFEPGDTIVCF 657
+EV +++ ECG+ E+ + GDT+ F
Sbjct: 792 DEVKEVREGYECGIAFENYQ-DIREGDTVEVF 822
>sp|Q3IYN5|IF2_RHOS4 Translation initiation factor IF-2 OS=Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
GN=infB PE=3 SV=1
Length = 836
Score = 348 bits (893), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 216/558 (38%), Positives = 304/558 (54%), Gaps = 63/558 (11%)
Query: 111 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDT 170
L RPP++TIMGHVDHGKT+LLD +R TSVV E GGITQHIGA+ V +SG +TFLDT
Sbjct: 331 LQPRPPIITIMGHVDHGKTSLLDAIRKTSVVSGEAGGITQHIGAYQVKTESGAVLTFLDT 390
Query: 171 PGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAA 230
PGHAAF++MR+RGA TDIVVLVVAADD VM QTVE+I+ A+ AKVP+IVAINKIDKP A
Sbjct: 391 PGHAAFTSMRARGAQVTDIVVLVVAADDAVMPQTVEAIKHAKAAKVPMIVAINKIDKPDA 450
Query: 231 DIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDL 290
D + + LL + VE + GD+ V +SA TG +D L E N+ L
Sbjct: 451 DPNKVRTDLLQHEVIVEKMSGDVLDVEVSAKTGLGLDELLE------NIAL--------- 495
Query: 291 GGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATA 350
QAEI+ L+A+ + ++E+K D RG +AT
Sbjct: 496 --------------------------QAEILDLRANPSRQAQGAVIEAKLDVGRGPVATV 529
Query: 351 LVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKISLGFKINPFCPSG 410
LVQ GTLK+G I V GQ W KVR+ LIN V +V + + +N +G
Sbjct: 530 LVQYGTLKRGDIFVVGQQWGKVRA-----LINDKGERVDEAGPSVPVEV-LGLNGTPEAG 583
Query: 411 DVDGSVEA---LLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLI 467
DV VE ++ D A T+ +Q E + +
Sbjct: 584 DVLNVVETEAQAREIADYREKAARDKRAAAGAATTLEQLMAKAKADADVAELP---VVIK 640
Query: 468 GDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAA 527
DV GS EA++ + + R+ ++HYGVG ++ TD+ LA A + FN + +A
Sbjct: 641 ADVQGSAEAIVQALEKVGNDEVRVRVLHYGVGAITETDITLAEASQAAVIGFNVRANASA 700
Query: 528 KTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVP 587
+ +A + V ++ ++VIY LV+DVK+ + +L E +G A + ++F IT
Sbjct: 701 RQAANQKSVEIRYYSVIYDLVDDVKKAASGLLKAEVREHFIGYAQIKEVFRITGVGN--- 757
Query: 588 VAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGL---RLEDP 644
VAGC ++GV +++A +L+R N V+ EG L+++K K+EV ++ ECG+ R ED
Sbjct: 758 VAGCIVTEGVARRSAGVRLLRDNIVIHEGTLKTLKRFKDEVKEVQSGQECGMAFERYED- 816
Query: 645 SIEFEPGDTIVCFVKNKV 662
PGD I F + +V
Sbjct: 817 ---IRPGDVIEIFEREEV 831
>sp|Q16D38|IF2_ROSDO Translation initiation factor IF-2 OS=Roseobacter denitrificans
(strain ATCC 33942 / OCh 114) GN=infB PE=3 SV=1
Length = 824
Score = 348 bits (893), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 211/552 (38%), Positives = 309/552 (55%), Gaps = 54/552 (9%)
Query: 94 DSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIG 153
D++ +DV + D + L RPPVVTIMGHVDHGKT+LLD +R VV E GGITQHIG
Sbjct: 302 DADVEDVIKEVEDDEADLKTRPPVVTIMGHVDHGKTSLLDAIRKAKVVAGEAGGITQHIG 361
Query: 154 AFVVTLKSGEQVTFLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMARE 213
A+ V SG+ ++FLDTPGHAAF++MRSRGA TDIVVLVVAADD VM QT+E+I A+
Sbjct: 362 AYQVKTDSGQLLSFLDTPGHAAFTSMRSRGAQVTDIVVLVVAADDAVMPQTIEAINHAKA 421
Query: 214 AKVPIIVAINKIDKPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAI 273
A+VP+IVAINKID+PAAD + + LL + VE + GD+Q V +SA+TG +D+L EAI
Sbjct: 422 AEVPMIVAINKIDRPAADPTKVRTDLLQHEVIVEQMSGDVQDVEVSAITGQGLDDLLEAI 481
Query: 274 ERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEA 333
AL QAEI+ LKA+ +
Sbjct: 482 ---------------------------AL--------------QAEILELKANPNRAAQG 500
Query: 334 MIVESKFDTHRGKLATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSG 393
++E++ D RG +AT LVQ GTL++G I V G+ + KVR+ LIN V+
Sbjct: 501 AVIEAQLDVGRGPVATVLVQNGTLRQGDIFVVGEQYGKVRA-----LINDQGERVKEAGP 555
Query: 394 TVKISLGFKINPFCPSGDVDG--SVEALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWT 451
+V + + +N +GDV S EA +Y + + G +T +
Sbjct: 556 SVPVEV-LGLNGTPEAGDVLNVTSTEAQAREIASYRANAAKDKRAAAGAATT--LEQLMA 612
Query: 452 CSTPTRESKHGRIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATL 511
+ + I + DV GS EA++ + + R+ ++H GVG ++ TDV LA
Sbjct: 613 NAKADEDVSELPILVKADVQGSAEAIVQAMEKIGNDEVRVRVLHSGVGAITETDVGLAEA 672
Query: 512 FNAIIYTFNTTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEA 571
A I FN + +A+ +A + GV ++ +++IY LV+DVK + +L E +G A
Sbjct: 673 SGAPIMGFNVRANASARNTANQKGVELRYYSIIYDLVDDVKAAASGLLSAEIRENFIGYA 732
Query: 572 NVLQMFLITDGKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSI 631
+ ++F +T K VAGC ++GV +++A +L+R N V+ EG L+++K K+EV +
Sbjct: 733 TIKEVFKVTGVGK---VAGCLVTEGVARRSAGVRLLRDNVVIHEGTLKTLKRFKDEVAEV 789
Query: 632 KKELECGLRLED 643
+ ECG+ E+
Sbjct: 790 QSGQECGMAFEN 801
>sp|Q21C31|IF2_RHOPB Translation initiation factor IF-2 OS=Rhodopseudomonas palustris
(strain BisB18) GN=infB PE=3 SV=1
Length = 880
Score = 348 bits (893), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 225/548 (41%), Positives = 307/548 (56%), Gaps = 57/548 (10%)
Query: 114 RPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTL-KSGEQVTFLDTPG 172
R PVVT+MGHVDHGKT+LLD LR+ +VV E GGITQHIGA+ VT +SG+++TF+DTPG
Sbjct: 377 RSPVVTVMGHVDHGKTSLLDALRHANVVSGEAGGITQHIGAYQVTSPESGKKITFIDTPG 436
Query: 173 HAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAADI 232
HAAF+ MR+RGA TDIVVLVVAADDGVM QT+E+I A+ AKVP+IVAINKIDK A
Sbjct: 437 HAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPVIVAINKIDKQDAKP 496
Query: 233 ERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDLGG 292
ER + LL GI VE LGGD+ V +SA TN+D L E I
Sbjct: 497 ERVRTELLQYGIQVESLGGDVVDVEVSAKNKTNLDKLLEMI------------------- 537
Query: 293 DIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATALV 352
AL QAE++ LK + P E ++E+K D RG +AT LV
Sbjct: 538 --------AL--------------QAELLDLKTNTERPAEGTVIEAKLDRGRGPVATVLV 575
Query: 353 QRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFCPSGD 411
QRGTL+ G I+VAG +VR+ LI+ T+ +V + LGF P +GD
Sbjct: 576 QRGTLRVGDIIVAGAEMGRVRA-----LISDQGVTLTEAGPSVPVEVLGFNGPP--EAGD 628
Query: 412 VDGSV--EALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLIGD 469
V EA +Y + R + V+ T K + + D
Sbjct: 629 RMAVVDSEARARQVTSYRAHQKR-EKSASAVSGLRGSLEQMMSQLKTTGRKDFPLIIKAD 687
Query: 470 VDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAKT 529
V GS+EA+L + + I+H GVG +S +DV LA FNA I FN H A
Sbjct: 688 VAGSLEAILGSLEKLGTDEVTARILHAGVGGISESDVTLAEGFNAAIIGFNVRAHKEAAA 747
Query: 530 SAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPVA 589
+A+ G+ ++ +N+IY LV+DVK+ ++ +L T E +LG A +L++F I+ K VA
Sbjct: 748 AAKRNGIEIRYYNIIYDLVDDVKKAMSGLLAPTLRETMLGNALILEVFNISKVGK---VA 804
Query: 590 GCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEFE 649
GCR + G +++ A +L+R N V+ EGKL ++K K+EV ++ ECG+ E+ +
Sbjct: 805 GCRVTDGSVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVQSGQECGMAFENYG-DMR 863
Query: 650 PGDTIVCF 657
GD I C+
Sbjct: 864 AGDIIECY 871
>sp|A3PNL2|IF2_RHOS1 Translation initiation factor IF-2 OS=Rhodobacter sphaeroides
(strain ATCC 17029 / ATH 2.4.9) GN=infB PE=3 SV=1
Length = 836
Score = 348 bits (893), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 216/558 (38%), Positives = 304/558 (54%), Gaps = 63/558 (11%)
Query: 111 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDT 170
L RPP++TIMGHVDHGKT+LLD +R TSVV E GGITQHIGA+ V +SG +TFLDT
Sbjct: 331 LQPRPPIITIMGHVDHGKTSLLDAIRKTSVVSGEAGGITQHIGAYQVKTESGAVLTFLDT 390
Query: 171 PGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAA 230
PGHAAF++MR+RGA TDIVVLVVAADD VM QTVE+I+ A+ AKVP+IVAINKIDKP A
Sbjct: 391 PGHAAFTSMRARGAQVTDIVVLVVAADDAVMPQTVEAIKHAKAAKVPMIVAINKIDKPDA 450
Query: 231 DIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDL 290
D + + LL + VE + GD+ V +SA TG +D L E N+ L
Sbjct: 451 DPNKVRTDLLQHEVIVEKMSGDVLDVEVSAKTGLGLDELLE------NIAL--------- 495
Query: 291 GGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATA 350
QAEI+ L+A+ + ++E+K D RG +AT
Sbjct: 496 --------------------------QAEILDLRANPSRQAQGAVIEAKLDVGRGPVATV 529
Query: 351 LVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKISLGFKINPFCPSG 410
LVQ GTLK+G I V GQ W KVR+ LIN V +V + + +N +G
Sbjct: 530 LVQYGTLKRGDIFVVGQQWGKVRA-----LINDKGERVDEAGPSVPVEV-LGLNGTPEAG 583
Query: 411 DVDGSVEA---LLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLI 467
DV VE ++ D A T+ +Q E + +
Sbjct: 584 DVLNVVETEAQAREIADYREKAARDKRAAAGAATTLEQLMAKAKADADVAELP---VVIK 640
Query: 468 GDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAA 527
DV GS EA++ + + R+ ++HYGVG ++ TD+ LA A + FN + +A
Sbjct: 641 ADVQGSAEAIVQALEKVGNDEVRVRVLHYGVGAITETDITLAEASQAAVIGFNVRANASA 700
Query: 528 KTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVP 587
+ +A + V ++ ++VIY LV+DVK+ + +L E +G A + ++F IT
Sbjct: 701 RQAANQKSVEIRYYSVIYDLVDDVKKAASGLLKAEVREHFIGYAQIKEVFRITGVGN--- 757
Query: 588 VAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGL---RLEDP 644
VAGC ++GV +++A +L+R N V+ EG L+++K K+EV ++ ECG+ R ED
Sbjct: 758 VAGCIVTEGVARRSAGVRLLRDNVVIHEGTLKTLKRFKDEVKEVQSGQECGMAFERYED- 816
Query: 645 SIEFEPGDTIVCFVKNKV 662
PGD I F + +V
Sbjct: 817 ---IRPGDVIEIFEREEV 831
>sp|B0T167|IF2_CAUSK Translation initiation factor IF-2 OS=Caulobacter sp. (strain K31)
GN=infB PE=3 SV=1
Length = 1045
Score = 348 bits (893), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 223/563 (39%), Positives = 306/563 (54%), Gaps = 61/563 (10%)
Query: 111 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDT 170
L RPPVVT+MGHVDHGKT+LLD LR V E GGITQHIGA+ V L+SG++VTFLDT
Sbjct: 538 LEPRPPVVTVMGHVDHGKTSLLDALRKADVASGEHGGITQHIGAYQVRLESGQKVTFLDT 597
Query: 171 PGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAA 230
PGHAAFS MR+RGA+ TD+V+LVVA DDGVM QTVE+I+ AR A+VPIIVA+NK+DKP A
Sbjct: 598 PGHAAFSQMRARGANITDLVILVVAGDDGVMPQTVEAIKHARAAEVPIIVAVNKMDKPGA 657
Query: 231 DIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDL 290
D R N LL I VE LGGD Q V +SA TG +D L E I +LL
Sbjct: 658 DSTRVVNELLQHEIVVESLGGDTQIVEVSAKTGQGLDELIERI-----LLL--------- 703
Query: 291 GGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATA 350
AE+M LKA+ + +++E+K D RG ++T
Sbjct: 704 ---------------------------AEVMDLKANPDRTADGVVIEAKLDKGRGAVSTV 736
Query: 351 LVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKISLGFKINPFCPSG 410
LV+RGTLK+G IVVAG + +VR++ + N L + + L +P P
Sbjct: 737 LVKRGTLKRGDIVVAGSQFGRVRALLNER--NEQLTEAGPATPVEILGLDGVPSPGDPFA 794
Query: 411 DVDGSVEALLDVFDTYTSALCRLDIVH---YGVTSTDQWRRYWTCSTPTRESKHGRIYLI 467
V+ EA Y L R +H G TS ++ K+ + L+
Sbjct: 795 VVEN--EARARELTEYRIRLKREKSMHPVGAGATS------MADMMAKLQDKKYRELPLV 846
Query: 468 --GDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHP 525
DV GS EA++ D ++ R I+ G G +S +DV LA A + FN
Sbjct: 847 IKADVQGSAEAIIGSLDAMSTDEVRARIILSGAGAISESDVMLAKGAGAPLIGFNVRASA 906
Query: 526 AAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKK 585
A+ AE GV ++ + +IY L++D+K ++ ML E LG A VLQ F I+ K
Sbjct: 907 QARALAEREGVEIRYYAIIYDLLDDIKGVLSGMLAPIQRETFLGNAEVLQAFDISKVGK- 965
Query: 586 VPVAGCRCSKGVLKKNALFKLVRRNEVLFE-GKLESMKHLKEEVTSIKKELECGLRLEDP 644
VAGCR ++GV++K A +++R + V+ E G L+++K K+EV + ECG+
Sbjct: 966 --VAGCRVTEGVVRKGAKVRIIRNDIVVLELGTLQTLKRFKDEVPEVPSGQECGMMFAG- 1022
Query: 645 SIEFEPGDTIVCFVKNKVPQFTD 667
+ + GDTI CF ++ + D
Sbjct: 1023 FQDIKVGDTIECFTVEEIKRQLD 1045
>sp|B4RC55|IF2_PHEZH Translation initiation factor IF-2 OS=Phenylobacterium zucineum
(strain HLK1) GN=infB PE=3 SV=1
Length = 994
Score = 348 bits (893), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 222/551 (40%), Positives = 298/551 (54%), Gaps = 59/551 (10%)
Query: 111 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDT 170
L+ RPPVV +MGHVDHGKT+LLD LR+T VV E GGITQHIGA+ V L G++VTFLDT
Sbjct: 490 LLPRPPVVAVMGHVDHGKTSLLDALRSTDVVSGEHGGITQHIGAYQVRLADGQRVTFLDT 549
Query: 171 PGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAA 230
PGHAAFS MR RGA+ TDIV+LVVAADDGVM QTVE+I+ A+ A PIIVAINKIDKP A
Sbjct: 550 PGHAAFSAMRMRGANVTDIVILVVAADDGVMPQTVEAIQHAKAAGAPIIVAINKIDKPDA 609
Query: 231 DIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDL 290
D R N LL I VE LGG+ QAV +SA T+ M L
Sbjct: 610 DPTRVINELLQHEIVVESLGGETQAVEVSA---------------TQKMGL--------- 645
Query: 291 GGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATA 350
D+L E I+ QAE++ LKA+ + ++E+K D RG +AT
Sbjct: 646 -----------------DDLIENILLQAEVLDLKANPDRTADGSVIEAKLDKGRGAVATV 688
Query: 351 LVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFK--INPFC 407
LV+RGTLK+G IVVAG +W +VR+ L+N +Q + + + LG +P
Sbjct: 689 LVKRGTLKRGDIVVAGSSWGRVRA-----LLNERGEQLQEATPSTPVEILGLDGTPDPGE 743
Query: 408 PSGDVDGSVEALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLI 467
P V+ A T R+ G ++ + +
Sbjct: 744 PFAVVENEARAR-----ELTEYRQRVKREKAGAPVASASLADMMAKLADKKVSELPVIIK 798
Query: 468 GDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAA 527
DV GS EA++ D + R I+ G G ++ +DV LA A I FN A
Sbjct: 799 ADVQGSAEAIVGSLDKLATDEVRARIILSGAGAINESDVLLAKGAGAPILGFNVRASKQA 858
Query: 528 KTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVP 587
+ AE GV ++ + +IY L++D+K ++ ML E LG A VLQ F IT K
Sbjct: 859 RDLAEREGVEIRYYAIIYDLIDDIKGVLSGMLAPIQRETFLGNAEVLQAFDIT---KVGR 915
Query: 588 VAGCRCSKGVLKKNALFKLVRRNEVLFE-GKLESMKHLKEEVTSIKKELECGLRLEDPSI 646
VAGCR ++GV++K A ++VR + V+ E G L+++K K+EV ++ ECG+ E
Sbjct: 916 VAGCRVTEGVVRKGARVRIVREDVVILELGVLKTLKRFKDEVNEVQAGQECGMAFEGFQ- 974
Query: 647 EFEPGDTIVCF 657
+ + GD I CF
Sbjct: 975 DIKAGDVIECF 985
>sp|Q5LWL4|IF2_RUEPO Translation initiation factor IF-2 OS=Ruegeria pomeroyi (strain
ATCC 700808 / DSM 15171 / DSS-3) GN=infB PE=3 SV=1
Length = 835
Score = 348 bits (892), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 211/554 (38%), Positives = 306/554 (55%), Gaps = 55/554 (9%)
Query: 111 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDT 170
L RPPV+TIMGHVDHGKT+LLD +R+ VV E GGITQHIGA+ V G ++FLDT
Sbjct: 330 LKPRPPVITIMGHVDHGKTSLLDAIRDAKVVAGEAGGITQHIGAYQVKTDGGATLSFLDT 389
Query: 171 PGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAA 230
PGHAAF++MRSRGA TDIVVLVVAADD VM QTVE+I A+ A VP+IVAINKIDKP A
Sbjct: 390 PGHAAFTSMRSRGAQVTDIVVLVVAADDAVMPQTVEAINHAKAAGVPMIVAINKIDKPEA 449
Query: 231 DIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDL 290
+ + + LL + VE + G++Q V +SA TG +D L EAI
Sbjct: 450 NPTKVRTDLLQHEVVVEAMSGEVQDVEVSAKTGEGLDELLEAI----------------- 492
Query: 291 GGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATA 350
AL QAEI+ LKA+ P + ++E++ D RG +AT
Sbjct: 493 ----------AL--------------QAEILELKANPDRPAQGAVIEAQLDVGRGPVATV 528
Query: 351 LVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKISLGFKINPFCPSG 410
L+Q+GTL++G I V G+ + KVR+ LIN V +V + + +N +G
Sbjct: 529 LIQKGTLRQGDIFVVGEQYGKVRA-----LINDKGERVSEAGPSVPVEV-LGLNGTPEAG 582
Query: 411 DVDG--SVEALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLIG 468
DV S EA Y + + + G +T + + I +
Sbjct: 583 DVLNVTSTEAQAREIAEYRAQVAKDKRAAAGAATT--LEQLMAKAKADENVAELPILVKA 640
Query: 469 DVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAK 528
DV GS EA++ + + R+ ++H GVG ++ TDV LA A I FN + +A+
Sbjct: 641 DVQGSAEAIVQAMEKIGNDEVRVRVLHSGVGAITETDVGLAEASGAPIMGFNVRANASAR 700
Query: 529 TSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPV 588
+A + GV ++ ++VIY LV+DVK + +L E +G AN+ ++F +++ K V
Sbjct: 701 NTANQKGVEIRYYSVIYDLVDDVKAAASGLLSAEIRENFIGYANIKEVFKVSNVGK---V 757
Query: 589 AGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEF 648
AGC ++GV +++A +L+R N V+ EG L+++K K+EV ++ ECG+ E+ +
Sbjct: 758 AGCLVTEGVARRSAGVRLLRDNVVIHEGTLKTLKRFKDEVAEVQSGQECGMAFENYD-DI 816
Query: 649 EPGDTIVCFVKNKV 662
PGD I F + +V
Sbjct: 817 RPGDVIEIFEREEV 830
>sp|A5E866|IF2_BRASB Translation initiation factor IF-2 OS=Bradyrhizobium sp. (strain
BTAi1 / ATCC BAA-1182) GN=infB PE=3 SV=1
Length = 921
Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 220/548 (40%), Positives = 304/548 (55%), Gaps = 57/548 (10%)
Query: 114 RPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLK-SGEQVTFLDTPG 172
R PVVT+MGHVDHGKT+LLD LR+ +VV E GGITQHIGA+ VT SG+++TF+DTPG
Sbjct: 418 RSPVVTVMGHVDHGKTSLLDALRHANVVSGEAGGITQHIGAYQVTAPDSGKKITFIDTPG 477
Query: 173 HAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAADI 232
HAAF+ MR+RGA TDIVVLVVAADDGVM QT+E+I A+ AKVP+IVAINKIDKP A
Sbjct: 478 HAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAKVPMIVAINKIDKPDARP 537
Query: 233 ERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDLGG 292
+R + LL + VE LGG++ V +SA TN+D L E I
Sbjct: 538 DRVRTELLQHEVQVESLGGEVVDVEVSAKNKTNLDRLLEMI------------------- 578
Query: 293 DIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATALV 352
AL QA+I+ LK + P E ++E+K D RG +AT LV
Sbjct: 579 --------AL--------------QADILDLKTNSDRPAEGTVIEAKLDRGRGPVATVLV 616
Query: 353 QRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFCPSGD 411
QRGTL+ G I+VAG +VR+ LI+ T+Q +V + LGF P GD
Sbjct: 617 QRGTLRVGDIIVAGAEMGRVRA-----LISDQGETLQEAGPSVPVEVLGFNGPPEA--GD 669
Query: 412 VDGSV--EALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLIGD 469
V EA +Y + R + ++ T K + + D
Sbjct: 670 RLAVVENEARARQVTSYRAHQKRENAA-ASISGMRGSLEQMMSQLKTAGRKEFPLVIKAD 728
Query: 470 VDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAKT 529
V GS+EA+L + + I+H GVG +S +DV LA FNA I F+ + A
Sbjct: 729 VQGSLEAILGSLEKLGTDEVAARILHAGVGGISESDVTLAEGFNAAIIGFSVRANKEAAA 788
Query: 530 SAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPVA 589
A+ G+ ++ +N+IY LV+DVK+ ++ +L T E +LG A +L++F I+ K VA
Sbjct: 789 LAKRNGIEIRYYNIIYDLVDDVKKAMSGLLAPTLRETMLGNAQILEVFNISKVGK---VA 845
Query: 590 GCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEFE 649
GCR + G +++ A +L+R N V+ EGKL ++K K+EV ++ ECG+ E +
Sbjct: 846 GCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVQAGQECGMAFESYG-DMR 904
Query: 650 PGDTIVCF 657
GD I C+
Sbjct: 905 VGDVIECY 912
>sp|B3PXE3|IF2_RHIE6 Translation initiation factor IF-2 OS=Rhizobium etli (strain CIAT
652) GN=infB PE=3 SV=1
Length = 917
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 213/549 (38%), Positives = 300/549 (54%), Gaps = 61/549 (11%)
Query: 114 RPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDTPGH 173
RPPVVTIMGHVDHGKT+LLD +R+ +VV E GGITQHIGA+ V ++G+++TF+DTPGH
Sbjct: 416 RPPVVTIMGHVDHGKTSLLDAIRHANVVAGEAGGITQHIGAYQVE-QNGQKITFIDTPGH 474
Query: 174 AAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAADIE 233
AAF+ MR+RGA TDI +LVVAADD VM QT+ESI A+ A VPIIVAINKIDK AD +
Sbjct: 475 AAFTAMRARGAQATDIAILVVAADDSVMPQTIESINHAKAAGVPIIVAINKIDKHEADPQ 534
Query: 234 RTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDLGGD 293
+ +N LL + VE +GG+
Sbjct: 535 KVRNQ-----------------------------------------LLQHEVFVESMGGE 553
Query: 294 IQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATALVQ 353
V +SA TG N+D L EA++ QAEI+ LKA+ E ++E++ D RG +AT LVQ
Sbjct: 554 TLDVEVSAKTGKNLDKLLEAVLLQAEILDLKANPNRTAEGTVIEAQLDRGRGSVATVLVQ 613
Query: 354 RGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFCPSGDV 412
GTLK G I+VAG W +VR+ L+ V+ + LG P +GD
Sbjct: 614 NGTLKPGQIIVAGDVWGRVRA-----LVTDKGDHVKEAGPATPVEVLGLSGTP--QAGDK 666
Query: 413 DGSVEALLDVFD--TYTSALCRLDIV--HYGVTSTDQWRRYWTCSTPTRESKHGRIYLIG 468
VE+ + Y L R G + + ST +E + + G
Sbjct: 667 FAVVESESRAREISEYRQRLARDKAAARQSGQRGSLEQMMTQMQSTGIKEFP---LVIKG 723
Query: 469 DVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAK 528
DV GS+EA+ + + R IVH G G ++ +D+ LA NA I FN + A+
Sbjct: 724 DVQGSIEAIAGALEKLGTDEVRARIVHSGAGGITESDISLAEASNAAIIGFNVRANAQAR 783
Query: 529 TSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPV 588
AE G+ ++ +N+IY LV+DVK ++ +L E +G A +L++F IT K V
Sbjct: 784 QFAERQGIEIRYYNIIYDLVDDVKAAMSGLLSPERRETFIGNAEILEVFNITKVGK---V 840
Query: 589 AGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEF 648
AGCR +G +++ A +L+R + V+ EGKL+++K K+EV+ + ECG+ E+ +
Sbjct: 841 AGCRVVEGKVERGAGVRLIRNDVVVHEGKLKTLKRFKDEVSEVPMGQECGMAFENYE-DM 899
Query: 649 EPGDTIVCF 657
GD I CF
Sbjct: 900 RVGDVIECF 908
>sp|Q2VZV0|IF2_MAGSA Translation initiation factor IF-2 OS=Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264) GN=infB PE=3 SV=1
Length = 872
Score = 346 bits (887), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 205/549 (37%), Positives = 303/549 (55%), Gaps = 54/549 (9%)
Query: 110 VLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLD 169
VL RPPVVT+MGHVDHGKT+LLD LR T VV E GGITQHIGA+ VT+ SG+++TF+D
Sbjct: 368 VLFTRPPVVTVMGHVDHGKTSLLDALRATDVVSGEAGGITQHIGAYQVTMSSGDKITFID 427
Query: 170 TPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPA 229
TPGH AF+ MR+RGA TDIVVLVVAADDG+M QTVE+IR A+ A VPIIVAINKIDKP
Sbjct: 428 TPGHEAFTAMRARGAKVTDIVVLVVAADDGIMPQTVEAIRHAKAAGVPIIVAINKIDKPG 487
Query: 230 ADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVED 289
A E+ + LL + E+LGGD+ A+ +SA N++ L E
Sbjct: 488 ATPEKVRQELLQHELVTEELGGDVLAIEVSAKKRLNLEKLEE------------------ 529
Query: 290 LGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLAT 349
AI+ QAEI+ LKA+ + ++VE+K + RG +AT
Sbjct: 530 -----------------------AILLQAEILDLKANPTRAAQGVVVEAKMEKGRGSVAT 566
Query: 350 ALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFCP 408
LVQ+GTLK G + VAG W +VR+ L++ +++ + + LG + P
Sbjct: 567 VLVQKGTLKVGEVFVAGAEWGRVRA-----LVDDHGNSIKEAGPSTPVEVLGLQGTPAAG 621
Query: 409 SGDVDGSVEALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLIG 468
V EA Y S + R T + + + E++ + + G
Sbjct: 622 DDFVTVEDEARAREIAGYRSRMDREAKAKLAQRGTLEQ---MFSAIKSGEAQELPVVIKG 678
Query: 469 DVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAK 528
DV GS+EA+ + + ++ I+H VG ++ +D+ LA N ++ FN +P A+
Sbjct: 679 DVQGSIEAISSTLEKMGNENVKVRILHAAVGAINESDITLAKASNGLLIGFNVRANPQAR 738
Query: 529 TSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPV 588
A GV ++ +++IY + +D+K+ ++ ML E+ LG A++ ++F IT K V
Sbjct: 739 DMARRDGVDIRYYSIIYDVTDDLKKMLSGMLAPELREKFLGYASIREVFNITKVGK---V 795
Query: 589 AGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEF 648
AGC ++G +K+ A +L+R N V+ G L +K K++V +++ ECG+ + +
Sbjct: 796 AGCMITEGTVKRGAKVRLLRDNVVIHTGDLGQLKRFKDDVKDVREGYECGMSFTNYE-DI 854
Query: 649 EPGDTIVCF 657
GD I CF
Sbjct: 855 RVGDVIECF 863
>sp|Q2J2J9|IF2_RHOP2 Translation initiation factor IF-2 OS=Rhodopseudomonas palustris
(strain HaA2) GN=infB PE=3 SV=1
Length = 886
Score = 346 bits (887), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 221/548 (40%), Positives = 306/548 (55%), Gaps = 58/548 (10%)
Query: 114 RPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTL-KSGEQVTFLDTPG 172
R PVVT+MGHVDHGKT+LLD LR+ +VV E GGITQHIGA+ VT +SG+++TF+DTPG
Sbjct: 384 RSPVVTVMGHVDHGKTSLLDALRHANVVSGEAGGITQHIGAYQVTSPESGKKITFIDTPG 443
Query: 173 HAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAADI 232
HAAF+ MR+RGA TDIVVLVVAADDGVM QT+E+I A+ A VPIIVAINKIDKP A
Sbjct: 444 HAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAANVPIIVAINKIDKPDAKP 503
Query: 233 ERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDLGG 292
ER + LL + VE LGGD+ V +SA TN+D L E I
Sbjct: 504 ERVRTELLQYNVQVESLGGDVVDVEVSAKNKTNLDKLLEMI------------------- 544
Query: 293 DIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATALV 352
AL QAE++ LK + P E ++E+K D RG +AT LV
Sbjct: 545 --------AL--------------QAELLDLKTNEQRPAEGTVIEAKLDRGRGPVATVLV 582
Query: 353 QRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFCPSGD 411
QRGTLK G I+VAG +VR+ LI+ TV +V + LGF P +GD
Sbjct: 583 QRGTLKVGDIIVAGAEMGRVRA-----LISDQGDTVDSAGPSVPVEVLGFNGPP--EAGD 635
Query: 412 VDGSV--EALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLIGD 469
V EA +Y + R + T K + + D
Sbjct: 636 RLAVVENEARARQVTSYRAHQKREKAAS--IVGMRGSLEQMMSQLKTTGRKDFPLIVKAD 693
Query: 470 VDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAKT 529
V GS+EA+L + + I+H GVG +S +DV LA F+A+I F+ + A
Sbjct: 694 VQGSLEAILGSLEKLGTDEVAARILHAGVGGISESDVTLAEGFSAVILGFSVRANKEAAA 753
Query: 530 SAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPVA 589
+A+ G+ ++ +N+IY LV+D+K+ ++ +L T E +LG A +L++F I+ K VA
Sbjct: 754 AAKRNGIEIRYYNIIYDLVDDIKKAMSGLLAPTLRETMLGNAQILEIFNISKVGK---VA 810
Query: 590 GCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEFE 649
GCR + G +++ A +L+R N V+ EGKL ++K K+EV ++ ECG+ E+ + +
Sbjct: 811 GCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVQSGQECGMAFENYT-DMR 869
Query: 650 PGDTIVCF 657
GD I C+
Sbjct: 870 AGDVIECY 877
>sp|Q1GCH2|IF2_RUEST Translation initiation factor IF-2 OS=Ruegeria sp. (strain TM1040)
GN=infB PE=3 SV=1
Length = 835
Score = 345 bits (886), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 217/567 (38%), Positives = 313/567 (55%), Gaps = 71/567 (12%)
Query: 111 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDT 170
L RPPV+TIMGHVDHGKT+LLD +R+ VV E GGITQHIGA+ VT SG ++FLDT
Sbjct: 330 LQPRPPVITIMGHVDHGKTSLLDAIRDAKVVAGEAGGITQHIGAYQVTTDSGAVLSFLDT 389
Query: 171 PGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAA 230
PGHAAF++MRSRGA TDIVVLVVAADD VM QTVE+I A+ A VP+IVAINKIDKPAA
Sbjct: 390 PGHAAFTSMRSRGAQVTDIVVLVVAADDSVMPQTVEAINHAKAAGVPMIVAINKIDKPAA 449
Query: 231 DIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDL 290
D + + LL + VE + G++Q V +SA TG +D L EAI
Sbjct: 450 DPNKVRAELLQHEVIVEAMSGEVQDVEVSAHTGQGLDELLEAI----------------- 492
Query: 291 GGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATA 350
AL QAEI+ LKA+ + ++E++ D RG +AT
Sbjct: 493 ----------AL--------------QAEILELKANPNRAAQGAVIEAQLDVGRGPVATV 528
Query: 351 LVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKISLGFKINPFCPSG 410
LVQ GTL++G I V G+ + KVR+ LIN V+ +V + + +N +G
Sbjct: 529 LVQTGTLRQGDIFVVGEQYGKVRA-----LINDKGERVKEAGPSVPVEV-LGLNGTPEAG 582
Query: 411 DVDGSVEALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTP----TRESKHGR--- 463
DV L+V T T A R +I Y + R +T +++K
Sbjct: 583 DV-------LNV--TETEAQAR-EIAEYREQAAKDKRAAAGAATTLEQLMQKAKEDENVS 632
Query: 464 ---IYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFN 520
I + DV GS EA++ + + R+ ++H GVG ++ TD+ LA A + FN
Sbjct: 633 ELPILVKADVQGSAEAIVQAMEKIGNDEVRVRVLHSGVGAITETDIGLAEASGAPVMGFN 692
Query: 521 TTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLIT 580
+ +A+ +A + GV ++ ++VIY LV+DVK + +L E +G A + +F ++
Sbjct: 693 VRANASARNTANQKGVEIRYYSVIYDLVDDVKAAASGLLSAEIKENFIGYAEIKDVFKVS 752
Query: 581 DGKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLR 640
+ K VAGC ++GV +++A +L+R N V+ EG L+++K K+EV ++ ECG+
Sbjct: 753 NVGK---VAGCLVTEGVARRSAGVRLLRDNVVIHEGTLKTLKRFKDEVAEVQSGQECGMA 809
Query: 641 LEDPSIEFEPGDTIVCFVKNKVPQFTD 667
E+ + P D I F + +V + D
Sbjct: 810 FENYD-DIRPKDVIEIFEREEVTRTLD 835
>sp|Q6NCN5|IF2_RHOPA Translation initiation factor IF-2 OS=Rhodopseudomonas palustris
(strain ATCC BAA-98 / CGA009) GN=infB PE=3 SV=1
Length = 883
Score = 345 bits (886), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 221/548 (40%), Positives = 306/548 (55%), Gaps = 57/548 (10%)
Query: 114 RPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTL-KSGEQVTFLDTPG 172
R PVVT+MGHVDHGKT+LLD LR+ +VV E GGITQHIGA+ VT +SG+++TF+DTPG
Sbjct: 380 RSPVVTVMGHVDHGKTSLLDALRHANVVSGEAGGITQHIGAYQVTSPESGKKITFIDTPG 439
Query: 173 HAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAADI 232
HAAF+ MR+RGA TDIVVLVVAADDGVM QT+E+I A+ A VPIIVAINKIDKP A
Sbjct: 440 HAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAGVPIIVAINKIDKPDAKP 499
Query: 233 ERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDLGG 292
+R + LL + VE +GGD+ V +SA N+D L E I
Sbjct: 500 DRVRTDLLQHNVQVESMGGDVVDVEVSAKNKINLDKLLEMI------------------- 540
Query: 293 DIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATALV 352
AL QAEI+ LK + P E ++E+K D RG +AT LV
Sbjct: 541 --------AL--------------QAEILELKTNTQRPAEGTVIEAKLDRGRGPVATVLV 578
Query: 353 QRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFCPSGD 411
QRGTL+ G I+VAG +VR+ LI+ TVQ +V + LGF P +GD
Sbjct: 579 QRGTLRVGDIIVAGAEMGRVRA-----LISDQGETVQEAGPSVPVEVLGFNGPP--EAGD 631
Query: 412 VDGSV--EALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLIGD 469
V EA Y + R + V+ T K + + D
Sbjct: 632 RLAVVENEARARQITDYRAHQKR-EKSAASVSGMRGSLEQMMTQLKTSGRKEFPLIVKAD 690
Query: 470 VDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAKT 529
V GS+EA+L + + I+H GVG +S +DV LA FNA+I F+ + A
Sbjct: 691 VQGSLEAILGSLEKLGTDEVAARILHAGVGGISESDVTLAEGFNAVILGFSVRANKEAAA 750
Query: 530 SAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPVA 589
+A+ G+ ++ +N+IY LV+D+K+ ++ +L T E +LG A +L++F I+ K VA
Sbjct: 751 AAKRNGIEIRYYNIIYDLVDDIKKAMSGLLAPTLRETMLGNAQILEIFNISKVGK---VA 807
Query: 590 GCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEFE 649
GCR + G +++ A +L+R N V+ EGKL ++K K+EV + ECG+ E+ + +
Sbjct: 808 GCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVVAGQECGMAFENYT-DMR 866
Query: 650 PGDTIVCF 657
GD I C+
Sbjct: 867 AGDIIECY 874
>sp|Q1QS64|IF2_NITHX Translation initiation factor IF-2 OS=Nitrobacter hamburgensis
(strain X14 / DSM 10229) GN=infB PE=3 SV=1
Length = 868
Score = 345 bits (885), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 219/557 (39%), Positives = 305/557 (54%), Gaps = 62/557 (11%)
Query: 107 DPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVT 166
D +V+ R PVVT+MGHVDHGKT+LLD +R+ +VV E GGITQHIGA+ VT G+++T
Sbjct: 359 DSTVVEPRSPVVTVMGHVDHGKTSLLDAVRHANVVSGEAGGITQHIGAYQVTSPDGKKIT 418
Query: 167 FLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKID 226
F+DTPGHAAF+ MR+RGA TDIVVLVVAADDGVM QTVE+I A+ AKVP+I+AINKID
Sbjct: 419 FIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAINHAKAAKVPMIIAINKID 478
Query: 227 KPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGIT 286
KP A ER + LL + VE +GG + V +SA TN+D L E I
Sbjct: 479 KPDAKPERVRTELLQHEVQVESMGGQVIDVEVSAKNKTNLDKLLEMIS------------ 526
Query: 287 VEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGK 346
QA+++ LK + P E ++E+K D RG
Sbjct: 527 -----------------------------LQADLLDLKTNASRPAEGTVIEAKLDRGRGP 557
Query: 347 LATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINP 405
+AT LVQRGTL+ G I+VAG +VR+ LI+ TV +V + LGF P
Sbjct: 558 VATVLVQRGTLRVGDIIVAGAEMGRVRA-----LISDQGETVDEAGPSVPVEVLGFNGPP 612
Query: 406 FCPSGDVDGSV--EALLDVFDTYTSALCRLDIVHYGVTSTDQWR---RYWTCSTPTRESK 460
+GD V EA +Y + R S+ R T K
Sbjct: 613 --EAGDRLAVVENEARARQVTSYRAHQKR----ENAAASSSGMRGSLEQMMSQLKTAGRK 666
Query: 461 HGRIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFN 520
+ + DV GS+EA+L + + I+H GVG +S +DV LA FNA I F+
Sbjct: 667 DFPLVIKADVQGSLEAILGSLEKLGTEEVAARILHAGVGGISESDVTLAEGFNAAIIGFS 726
Query: 521 TTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLIT 580
+ A +A+ G+ ++ +N+IY LV+DVK+ ++ +L T E +LG A +L++F I+
Sbjct: 727 VRANKEAAAAAKRNGIEIRYYNIIYDLVDDVKKAMSGLLAPTLRETMLGNAEILEVFNIS 786
Query: 581 DGKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLR 640
K VAGCR + G +++ A +L+R N V+ EGKL ++K K+EV ++ ECG+
Sbjct: 787 KVGK---VAGCRVTDGNVERGANVRLIRENVVVHEGKLSTLKRFKDEVKEVQSGQECGMA 843
Query: 641 LEDPSIEFEPGDTIVCF 657
E + GD I C+
Sbjct: 844 FESYH-DMRVGDVIECY 859
>sp|Q4UL51|IF2_RICFE Translation initiation factor IF-2 OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=infB PE=3 SV=1
Length = 829
Score = 345 bits (884), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 221/572 (38%), Positives = 307/572 (53%), Gaps = 75/572 (13%)
Query: 99 DVERRPPADPSV--LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFV 156
DVE +D V L R PVVT+MGHVDHGKT+LLD L++T + SE GGITQHIGA+
Sbjct: 311 DVENVLISDDKVEDLRTRAPVVTVMGHVDHGKTSLLDALKSTDIAASETGGITQHIGAYR 370
Query: 157 VTLKSGEQVTFLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKV 216
VT+ +TF+DTPGH AFS MRSRGA TDIV++VVAADDG+ QTVE+I A+ A V
Sbjct: 371 VTIADDRAITFIDTPGHEAFSEMRSRGAKVTDIVIIVVAADDGIKTQTVEAINHAKAAGV 430
Query: 217 PIIVAINKIDKPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERT 276
PIIVAINKIDKP DIER KN L I E+ GGD+ +PISAL N+D L EAI
Sbjct: 431 PIIVAINKIDKPDIDIERVKNELYVHEIIGEEAGGDVMVIPISALKKINLDKLEEAI--- 487
Query: 277 KNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIV 336
+L+ AE+ LKA G +++
Sbjct: 488 --LLI------------------------------------AEMQDLKASPFGSAAGVVI 509
Query: 337 ESKFDTHRGKLATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRT-SGTV 395
ESK + RG L T LVQRGTL+ G I++AG ++ KV+ ++ + L V+ T S V
Sbjct: 510 ESKIEKGRGTLTTILVQRGTLRNGDIIIAGSSYGKVKKMTN----DKGLEIVEATPSVPV 565
Query: 396 KISLGFKINPFCPSGDVDGSVEALLDVFDTYTSALCRLDIVHY----------GVTSTDQ 445
+I G PF D F+ + DI Y +
Sbjct: 566 EIQ-GLNEVPFAG------------DKFNVVQNEKQAKDIAEYRMRLAKEKKISIAPRSS 612
Query: 446 WRRYWTCSTPTRESKHGRIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATD 505
+ ++ + K + + GDV GSVEA+ S +L I+H GVG ++ +D
Sbjct: 613 LEDLFLKASGNSKIKELPLIIKGDVQGSVEAISGSLLKLPSDEIKLRILHSGVGPITESD 672
Query: 506 VELATLFNAIIYTFNTTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAE 565
V LA +AII FN A T+AE+ V ++ +++IY L++DVK ++ ML E
Sbjct: 673 VSLAHASSAIIVGFNVRAGANALTAAEKEKVDIRYYSIIYNLIDDVKAIMSGMLDPIVRE 732
Query: 566 EVLGEANVLQMFLITDGKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLK 625
+ +G + Q+F IT K +AG +KG++KK A +L+R N V+ EGKL+++K K
Sbjct: 733 QYIGSVEIRQIFNITKVGK---IAGSYVTKGIIKKGAGVRLLRDNVVIHEGKLKTLKRFK 789
Query: 626 EEVTSIKKELECGLRLEDPSIEFEPGDTIVCF 657
+EV +++ ECG+ E+ + GDT+ F
Sbjct: 790 DEVKEVREGYECGIAFENYE-DIREGDTVEVF 820
>sp|Q3SKX1|IF2_THIDA Translation initiation factor IF-2 OS=Thiobacillus denitrificans
(strain ATCC 25259) GN=infB PE=3 SV=1
Length = 922
Score = 345 bits (884), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 208/549 (37%), Positives = 310/549 (56%), Gaps = 57/549 (10%)
Query: 111 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDT 170
++ RPPVVT+MGHVDHGKT+LLDT+R T V E GGITQHIGA+ V + G +TFLDT
Sbjct: 420 MVARPPVVTVMGHVDHGKTSLLDTIRRTRVASGEAGGITQHIGAYHVETEKG-VITFLDT 478
Query: 171 PGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAA 230
PGH AF+ MR+RGA TDIVVLVVAADDGVM QT+E+I A+ A VP++VA+NKIDKP A
Sbjct: 479 PGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTIEAIHHAKAAGVPLVVAVNKIDKPDA 538
Query: 231 DIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDL 290
+ ER + L+AQG+T E+ GGD Q V +SA TN++ L +AI LL
Sbjct: 539 NPERIRQELVAQGVTPEEWGGDTQFVEVSAKANTNINGLLDAI------LL--------- 583
Query: 291 GGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATA 350
QAE++ L+A GP + +++E++ D +G +AT
Sbjct: 584 --------------------------QAEVLELQAPADGPAKGIVIEARLDKGKGPVATL 617
Query: 351 LVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKISLGFKINPFCPSG 410
LVQ GTL++G +V+AGQ + +VR+ +++ A TV ++ + + + P
Sbjct: 618 LVQSGTLRRGDMVLAGQVYGRVRA-----MLDEAGKTVTEAGPSIPVEIQGLSD--VPQA 670
Query: 411 DVDGSVEALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTC--STPTRESKHGRIYLIG 468
D V L D AL R + Q + + E +H I L
Sbjct: 671 GEDMMV--LPDERKAREIALFRQGKYRDVQLAKKQAAKLESMFDQMGQGEVQHLPIILKA 728
Query: 469 DVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAK 528
D+ GS E L ++ +++I+H GVG ++ +DV LA A++ FN +A+
Sbjct: 729 DMQGSYEGLAHALGKISTDEVKVNIIHSGVGAITESDVNLALASKAVLIGFNVRADASAR 788
Query: 529 TSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPV 588
AE GV ++ +N+IY+ V++VK ++ ML E V+G V Q+F+I+ K +
Sbjct: 789 KLAESSGVDIRYYNIIYEAVDEVKAALSGMLAPEKKESVIGTVEVRQVFVIS---KVGTI 845
Query: 589 AGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEF 648
AGC + GV+K+ A +L+R N V+ +G+L+S+K K++V +K ECGL L++ + +
Sbjct: 846 AGCYVTDGVVKRGAGVRLIRNNVVIHQGELDSLKRFKDDVKEVKANFECGLSLKNFN-DI 904
Query: 649 EPGDTIVCF 657
+ GD + F
Sbjct: 905 QEGDILEVF 913
>sp|Q0C5Z5|IF2_HYPNA Translation initiation factor IF-2 OS=Hyphomonas neptunium (strain
ATCC 15444) GN=infB PE=3 SV=1
Length = 853
Score = 345 bits (884), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 225/563 (39%), Positives = 302/563 (53%), Gaps = 80/563 (14%)
Query: 111 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDT 170
L R P+VTIMGHVDHGKT+LLD LR T V E GGITQHIGA+ V LKSGE++TFLDT
Sbjct: 345 LQPRAPIVTIMGHVDHGKTSLLDALRKTDVAGGEAGGITQHIGAYQVQLKSGERITFLDT 404
Query: 171 PGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAA 230
PGHAAF+ MR+RGA+ TDI +LVVAADD V QT+ESI A+ A VPI+VAI K D A
Sbjct: 405 PGHAAFTAMRARGANATDIAILVVAADDSVKPQTIESISHAKAAGVPIVVAITKSDLHDA 464
Query: 231 DIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDL 290
+ E+ LL I VE +GG QAV +SA TG +D LT+AI
Sbjct: 465 NPEKVLTDLLQYDIQVEAMGGVTQAVKVSAKTGAGLDELTDAIS---------------- 508
Query: 291 GGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATA 350
QAEI+ LKA+ + +++ESK D RG +AT
Sbjct: 509 -------------------------IQAEILELKANPNRQADGVVIESKLDKGRGPVATV 543
Query: 351 LVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKIS-LGFKINPFCPS 409
LV+RGTLK+G IVVAG W KVR+ L++ + ++ + LG P
Sbjct: 544 LVKRGTLKRGDIVVAGANWGKVRA-----LVDERGQQLADAGPSLPVEVLGLDGAP--DP 596
Query: 410 GDVDGSVEALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRES--------KH 461
GD + V D+ A +I Y + + Q S R S K
Sbjct: 597 GDA-------IVVVDSEARA---REITEYRIRTKRQV--AGNASVAARASLDQLMNRLKD 644
Query: 462 GR-------IYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNA 514
G I L GDV GSVEA+ D ++ R ++H VG +S +DV LA NA
Sbjct: 645 GAIVTSELPIVLKGDVQGSVEAITMSLDKISTEEVRAKVIHGAVGGISESDVLLARSSNA 704
Query: 515 IIYTFNTTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVL 574
I+ FN + A+ AE GV ++ +++IY L++DVK ++ ML E LG A++L
Sbjct: 705 PIFAFNVRANKQARDLAEREGVEIRYYSIIYDLLDDVKATLSGMLAPEKRETFLGYADIL 764
Query: 575 QMFLITDGKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKE 634
++F IT K VAGCR S+G + + +L+R N V+ EGKL+++K K+EV+ +
Sbjct: 765 EVFNIT---KVGKVAGCRISEGKVMRGCGVRLLRDNVVIHEGKLKTLKRFKDEVSEVNAG 821
Query: 635 LECGLRLEDPSIEFEPGDTIVCF 657
+ECG+ E + GD I CF
Sbjct: 822 MECGMAFERYD-DIRVGDKIECF 843
>sp|A4WW80|IF2_RHOS5 Translation initiation factor IF-2 OS=Rhodobacter sphaeroides
(strain ATCC 17025 / ATH 2.4.3) GN=infB PE=3 SV=1
Length = 838
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 211/557 (37%), Positives = 303/557 (54%), Gaps = 57/557 (10%)
Query: 111 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDT 170
L RPP++TIMGHVDHGKT+LLD +R TSVV E GGITQHIGA+ V +SG +TFLDT
Sbjct: 333 LQPRPPIITIMGHVDHGKTSLLDAIRKTSVVSGEAGGITQHIGAYQVKTESGAVLTFLDT 392
Query: 171 PGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAA 230
PGHAAF++MR+RGA TDIVVLVVAADD VM QTVE+I+ A+ AKVP+IVAINKIDKP A
Sbjct: 393 PGHAAFTSMRARGAQVTDIVVLVVAADDAVMPQTVEAIKHAKAAKVPMIVAINKIDKPDA 452
Query: 231 DIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDL 290
D + + LL + VE + GD+ V +SA TG +D L E N+ L
Sbjct: 453 DPNKVRTDLLQHEVIVEKMSGDVLDVEVSAKTGLGLDELLE------NIAL--------- 497
Query: 291 GGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATA 350
QAE++ L+A+ + ++E+K D RG +AT
Sbjct: 498 --------------------------QAELLDLRANPKRAAQGAVIEAKLDVGRGPVATV 531
Query: 351 LVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKISLGFKINPFCPSG 410
LVQ GTLK+G I V GQ W KVR+ L+N V +V + + +N +G
Sbjct: 532 LVQHGTLKRGDIFVVGQQWGKVRA-----LVNDKGERVDEAGPSVPVEV-LGLNGTPEAG 585
Query: 411 DVDGSVEA---LLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLI 467
DV VE ++ D A T+ +Q E + +
Sbjct: 586 DVLNVVETEAQAREIADYREKAARDKRAAAGAATTLEQLMAKAKADADVAELP---VVIK 642
Query: 468 GDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAA 527
DV GS EA++ + + R+ ++HYGVG ++ TD+ LA A + FN + +A
Sbjct: 643 ADVQGSAEAIVQALEKVGNEEVRVRVLHYGVGAITETDIGLAEASQAAVIGFNVRANASA 702
Query: 528 KTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVP 587
+ +A + V ++ ++VIY LV+DVK+ + +L E +G A + ++F IT
Sbjct: 703 RQAANQKSVEIRYYSVIYDLVDDVKKAASGLLKAEVREHFIGYARIQEVFRITGVGN--- 759
Query: 588 VAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIE 647
VAGC ++GV +++A +L+R N V+ EG L+++K K+EV ++ ECG+ E +
Sbjct: 760 VAGCLVTEGVARRSAGVRLLRDNVVIHEGTLKTLKRFKDEVKEVQSGQECGMAFERYE-D 818
Query: 648 FEPGDTIVCFVKNKVPQ 664
GD I F + +V +
Sbjct: 819 IRAGDVIEIFEREEVER 835
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 243,616,542
Number of Sequences: 539616
Number of extensions: 10232588
Number of successful extensions: 47262
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 4058
Number of HSP's successfully gapped in prelim test: 1105
Number of HSP's that attempted gapping in prelim test: 32710
Number of HSP's gapped (non-prelim): 9408
length of query: 673
length of database: 191,569,459
effective HSP length: 124
effective length of query: 549
effective length of database: 124,657,075
effective search space: 68436734175
effective search space used: 68436734175
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)