Diaphorina citri psyllid: psy4665

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670---
MFLITDDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKISLGFKINPFCPSGDVDGSVEALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEFEPGDTIVCFVKNKVPQFTDWNPPGF
cccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHcHHHHHHHHHHccccccccccccccccHHHHHHHHHHcccEEEEEcccccccccccccccccccccccccccccccEEEEccccccccccHHHHHHccccccccccccccccccEEEEEccccEEEEEcccccHHHHHHHHcccccccEEEEEEEccccccHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHccccCEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHcccccccccccCEEEEEEcccccccHHHHHHHHHHHHHHHccccccccCEEEEEEEEEccccccEEEEEEEccccccccEEEEcccEEEEEccccccccccccccccccccccEEEEEcccccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccECcEEEEccccccHHHHHHHHHHcccccEEEEEEECccccccHHHHHHHHccccEEEEEcccccHHHHHHHHHcccEEEEEcHHccHHHHHHHHHHccccccEEEEEEEEEEEEEEEEEccccCEEEEEEEEEECcEEEEcccEEEEEccEEEEEcccHHccccHHHHHHcccccCEEEEEcccccccccccEEEEEEEEEEEEECccccccc
*FLITDDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPTNSVADDSNGK************LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKISLGFKINPFCPSGDVDGSVEALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEFEPGDTIVCFVKNKVPQFTDWNPPGF
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MFLITDDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAFVVTLKSGEQVTFLDTPGHAAFSNMRSRGAHCTDIVVLVVAADDGVMEQTVESIRMAREAKVPIIVAINKIDKPAADIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIERTKNMLLAQGITVEDLGGDIQAVPISALTGTNVDNLTEAIVAQAEIMHLKADYGGPVEAMIVESKFDTHRGKLATALVQRGTLKKGAIVVAGQAWAKVRSISRKTLINTALGTVQRTSGTVKISLGFKINPFCPSGDVDGSVEALLDVFDTYTSALCRLDIVHYGVTSTDQWRRYWTCSTPTRESKHGRIYLIGDVDGSVEALLDVFDTYTSALCRLDIVHYGVGQVSATDVELATLFNAIIYTFNTTLHPAAKTSAEELGVTVKQFNVIYKLVEDVKEEINAMLPHTYAEEVLGEANVLQMFLITDGKKKVPVAGCRCSKGVLKKNALFKLVRRNEVLFEGKLESMKHLKEEVTSIKKELECGLRLEDPSIEFEPGDTIVCFVKNKVPQFTDWNPPGF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Translation initiation factor IF-2, mitochondrial One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.confidentQ91YJ5
Translation initiation factor IF-2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.confidentQ16D38

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0043024 [MF]ribosomal small subunit bindingprobableGO:0043021, GO:0003674, GO:0005488
GO:0008135 [MF]translation factor activity, nucleic acid bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0006446 [BP]regulation of translational initiationprobableGO:0032268, GO:0009889, GO:0080090, GO:0019222, GO:0051246, GO:0060255, GO:0010608, GO:0031323, GO:2000112, GO:0050794, GO:0050789, GO:0010556, GO:0065007, GO:0031326, GO:0006417, GO:0008150, GO:0010468

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3IZY, chain P
Confidence level:very confident
Coverage over the Query: 113-256,298-658
View the alignment between query and template
View the model in PyMOL
Template: 1G7S, chain A
Confidence level:very confident
Coverage over the Query: 113-233,250-431,448-667
View the alignment between query and template
View the model in PyMOL
Template: 2QTF, chain A
Confidence level:very confident
Coverage over the Query: 27-70,93-103,115-138,150-279
View the alignment between query and template
View the model in PyMOL
Template: 1MKY, chain A
Confidence level:very confident
Coverage over the Query: 4-280
View the alignment between query and template
View the model in PyMOL