BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4666
(828 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4DCH|A Chain A, Insights Into Glucokinase Activation Mechanism:
Observation Of Multiple Distinct Protein Conformations
Length = 473
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 183/468 (39%), Positives = 260/468 (55%), Gaps = 94/468 (20%)
Query: 1 MSRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYAGE 60
M R+ ++D+GL +TH A+VK PT+++ P+G+E G FL+LDLGGTNFRV+++ GE
Sbjct: 34 MRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKVGE 93
Query: 61 ------KFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP 114
+ +H+ Y I + MTG E LFDYI+E + +F+ + + +++ LPLGFTFSFP
Sbjct: 94 GEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFP 153
Query: 115 VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVEL 174
V + K G+L+ WTKGFK G G NVV L
Sbjct: 154 VRHEDIDK-----------------------------GILLNWTKGFKASGAEGNNVVGL 184
Query: 175 LQQALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFP 234
L+ A+ R R +F
Sbjct: 185 LRDAIKR------------------------------------------------RGDFE 196
Query: 235 VNVVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVIN 294
++VVA++NDT ++SC Y+ C++G+IVGTG NACY+E +NV E + + + +N
Sbjct: 197 MDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDEGR--MCVN 254
Query: 295 TEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGI 354
TEWGAFGD G LD L E+DR +D+ S N GQQ+YEK++ G YMGE+VRL++ + +E +
Sbjct: 255 TEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENL 314
Query: 355 LFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLC 414
LF+G+ S QL TRG F+T ++S +E +D GD N+L P T DC VR C
Sbjct: 315 LFHGEASEQLRTRGAFETRFVSQVE-SDTGDRKQIYNILSTLGLRPSTT--DCDIVRRAC 371
Query: 415 RVVSQRSAHLASAGIATLLNRM------DFSIVTVGVDGSVYRYHPYF 456
VS R+AH+ SAG+A ++NRM D +TVGVDGSVY+ HP F
Sbjct: 372 ESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSF 419
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E +NV E + + + +NTEWGAFGD G LD L E+DR +D+
Sbjct: 223 GMIVGTGCNACYMEEMQNVELVEGDEGR--MCVNTEWGAFGDSGELDEFLLEYDRLVDES 280
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
S N GQQ+YEK++ G YMGE+VRL++ + +E +LF+G+ S QL TRG F+T ++S +E+
Sbjct: 281 SANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVES 340
>pdb|3S41|A Chain A, Glucokinase In Complex With Activator And Glucose
pdb|4DHY|A Chain A, Crystal Structure Of Human Glucokinase In Complex With
Glucose And Activator
Length = 469
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 183/468 (39%), Positives = 260/468 (55%), Gaps = 94/468 (20%)
Query: 1 MSRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYAGE 60
M R+ ++D+GL +TH A+VK PT+++ P+G+E G FL+LDLGGTNFRV+++ GE
Sbjct: 38 MRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKVGE 97
Query: 61 ------KFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP 114
+ +H+ Y I + MTG E LFDYI+E + +F+ + + +++ LPLGFTFSFP
Sbjct: 98 GEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFP 157
Query: 115 VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVEL 174
V + K G+L+ WTKGFK G G NVV L
Sbjct: 158 VRHEDIDK-----------------------------GILLNWTKGFKASGAEGNNVVGL 188
Query: 175 LQQALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFP 234
L+ A+ R R +F
Sbjct: 189 LRDAIKR------------------------------------------------RGDFE 200
Query: 235 VNVVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVIN 294
++VVA++NDT ++SC Y+ C++G+IVGTG NACY+E +NV E + + + +N
Sbjct: 201 MDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDEGR--MCVN 258
Query: 295 TEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGI 354
TEWGAFGD G LD L E+DR +D+ S N GQQ+YEK++ G YMGE+VRL++ + +E +
Sbjct: 259 TEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENL 318
Query: 355 LFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLC 414
LF+G+ S QL TRG F+T ++S +E +D GD N+L P T DC VR C
Sbjct: 319 LFHGEASEQLRTRGAFETRFVSQVE-SDTGDRKQIYNILSTLGLRPSTT--DCDIVRRAC 375
Query: 415 RVVSQRSAHLASAGIATLLNRM------DFSIVTVGVDGSVYRYHPYF 456
VS R+AH+ SAG+A ++NRM D +TVGVDGSVY+ HP F
Sbjct: 376 ESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSF 423
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E +NV E + + + +NTEWGAFGD G LD L E+DR +D+
Sbjct: 227 GMIVGTGCNACYMEEMQNVELVEGDEGR--MCVNTEWGAFGDSGELDEFLLEYDRLVDES 284
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
S N GQQ+YEK++ G YMGE+VRL++ + +E +LF+G+ S QL TRG F+T ++S +E+
Sbjct: 285 SANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVES 344
>pdb|3FR0|A Chain A, Human Glucokinase In Complex With 2-Amino Benzamide
Activator
pdb|3A0I|X Chain X, Human Glucokinase In Complex With A Synthetic Activator
pdb|3GOI|A Chain A, Human Glucokinase In Complex With A Synthetic Activator
Length = 455
Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 183/468 (39%), Positives = 260/468 (55%), Gaps = 94/468 (20%)
Query: 1 MSRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYAGE 60
M R+ ++D+GL +TH A+VK PT+++ P+G+E G FL+LDLGGTNFRV+++ GE
Sbjct: 24 MRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKVGE 83
Query: 61 ------KFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP 114
+ +H+ Y I + MTG E LFDYI+E + +F+ + + +++ LPLGFTFSFP
Sbjct: 84 GEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFP 143
Query: 115 VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVEL 174
V + K G+L+ WTKGFK G G NVV L
Sbjct: 144 VRHEDIDK-----------------------------GILLNWTKGFKASGAEGNNVVGL 174
Query: 175 LQQALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFP 234
L+ A+ R R +F
Sbjct: 175 LRDAIKR------------------------------------------------RGDFE 186
Query: 235 VNVVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVIN 294
++VVA++NDT ++SC Y+ C++G+IVGTG NACY+E +NV E + + + +N
Sbjct: 187 MDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDEGR--MCVN 244
Query: 295 TEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGI 354
TEWGAFGD G LD L E+DR +D+ S N GQQ+YEK++ G YMGE+VRL++ + +E +
Sbjct: 245 TEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENL 304
Query: 355 LFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLC 414
LF+G+ S QL TRG F+T ++S +E +D GD N+L P T DC VR C
Sbjct: 305 LFHGEASEQLRTRGAFETRFVSQVE-SDTGDRKQIYNILSTLGLRPSTT--DCDIVRRAC 361
Query: 415 RVVSQRSAHLASAGIATLLNRM------DFSIVTVGVDGSVYRYHPYF 456
VS R+AH+ SAG+A ++NRM D +TVGVDGSVY+ HP F
Sbjct: 362 ESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSF 409
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E +NV E + + + +NTEWGAFGD G LD L E+DR +D+
Sbjct: 213 GMIVGTGCNACYMEEMQNVELVEGDEGR--MCVNTEWGAFGDSGELDEFLLEYDRLVDES 270
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
S N GQQ+YEK++ G YMGE+VRL++ + +E +LF+G+ S QL TRG F+T ++S +E+
Sbjct: 271 SANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVES 330
>pdb|3F9M|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose And
Activator Showing A Mobile Flap
pdb|3FGU|A Chain A, Catalytic Complex Of Human Glucokinase
pdb|3ID8|A Chain A, Ternary Complex Of Human Pancreatic Glucokinase
Crystallized With Activator, Glucose And Amp-Pnp
pdb|3IDH|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose
pdb|3VEV|A Chain A, Glucokinase In Complex With An Activator And Glucose
pdb|3VF6|A Chain A, Glucokinase In Complex With Glucose And Activator
Length = 470
Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 183/468 (39%), Positives = 260/468 (55%), Gaps = 94/468 (20%)
Query: 1 MSRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYAGE 60
M R+ ++D+GL +TH A+VK PT+++ P+G+E G FL+LDLGGTNFRV+++ GE
Sbjct: 39 MRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKVGE 98
Query: 61 ------KFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP 114
+ +H+ Y I + MTG E LFDYI+E + +F+ + + +++ LPLGFTFSFP
Sbjct: 99 GEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFP 158
Query: 115 VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVEL 174
V + K G+L+ WTKGFK G G NVV L
Sbjct: 159 VRHEDIDK-----------------------------GILLNWTKGFKASGAEGNNVVGL 189
Query: 175 LQQALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFP 234
L+ A+ R R +F
Sbjct: 190 LRDAIKR------------------------------------------------RGDFE 201
Query: 235 VNVVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVIN 294
++VVA++NDT ++SC Y+ C++G+IVGTG NACY+E +NV E + + + +N
Sbjct: 202 MDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDEGR--MCVN 259
Query: 295 TEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGI 354
TEWGAFGD G LD L E+DR +D+ S N GQQ+YEK++ G YMGE+VRL++ + +E +
Sbjct: 260 TEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENL 319
Query: 355 LFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLC 414
LF+G+ S QL TRG F+T ++S +E +D GD N+L P T DC VR C
Sbjct: 320 LFHGEASEQLRTRGAFETRFVSQVE-SDTGDRKQIYNILSTLGLRPSTT--DCDIVRRAC 376
Query: 415 RVVSQRSAHLASAGIATLLNRM------DFSIVTVGVDGSVYRYHPYF 456
VS R+AH+ SAG+A ++NRM D +TVGVDGSVY+ HP F
Sbjct: 377 ESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSF 424
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E +NV E + + + +NTEWGAFGD G LD L E+DR +D+
Sbjct: 228 GMIVGTGCNACYMEEMQNVELVEGDEGR--MCVNTEWGAFGDSGELDEFLLEYDRLVDES 285
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
S N GQQ+YEK++ G YMGE+VRL++ + +E +LF+G+ S QL TRG F+T ++S +E+
Sbjct: 286 SANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVES 345
>pdb|1V4S|A Chain A, Crystal Structure Of Human Glucokinase
pdb|3VEY|A Chain A, Glucokinase In Complex With Glucose And Atpgs
Length = 455
Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 183/468 (39%), Positives = 260/468 (55%), Gaps = 94/468 (20%)
Query: 1 MSRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYAGE 60
M R+ ++D+GL +TH A+VK PT+++ P+G+E G FL+LDLGGTNFRV+++ GE
Sbjct: 24 MRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKVGE 83
Query: 61 ------KFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP 114
+ +H+ Y I + MTG E LFDYI+E + +F+ + + +++ LPLGFTFSFP
Sbjct: 84 GEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFP 143
Query: 115 VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVEL 174
V + K G+L+ WTKGFK G G NVV L
Sbjct: 144 VRHEDIDK-----------------------------GILLNWTKGFKASGAEGNNVVGL 174
Query: 175 LQQALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFP 234
L+ A+ R R +F
Sbjct: 175 LRDAIKR------------------------------------------------RGDFE 186
Query: 235 VNVVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVIN 294
++VVA++NDT ++SC Y+ C++G+IVGTG NACY+E +NV E + + + +N
Sbjct: 187 MDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDEGR--MCVN 244
Query: 295 TEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGI 354
TEWGAFGD G LD L E+DR +D+ S N GQQ+YEK++ G YMGE+VRL++ + +E +
Sbjct: 245 TEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENL 304
Query: 355 LFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLC 414
LF+G+ S QL TRG F+T ++S +E +D GD N+L P T DC VR C
Sbjct: 305 LFHGEASEQLRTRGAFETRFVSQVE-SDTGDRKQIYNILSTLGLRPSTT--DCDIVRRAC 361
Query: 415 RVVSQRSAHLASAGIATLLNRM------DFSIVTVGVDGSVYRYHPYF 456
VS R+AH+ SAG+A ++NRM D +TVGVDGSVY+ HP F
Sbjct: 362 ESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSF 409
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E +NV E + + + +NTEWGAFGD G LD L E+DR +D+
Sbjct: 213 GMIVGTGCNACYMEEMQNVELVEGDEGR--MCVNTEWGAFGDSGELDEFLLEYDRLVDES 270
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
S N GQQ+YEK++ G YMGE+VRL++ + +E +LF+G+ S QL TRG F+T ++S +E+
Sbjct: 271 SANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVES 330
>pdb|1V4T|A Chain A, Crystal Structure Of Human Glucokinase
pdb|3H1V|X Chain X, Human Glucokinase In Complex With A Synthetic Activator
Length = 451
Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 183/468 (39%), Positives = 260/468 (55%), Gaps = 94/468 (20%)
Query: 1 MSRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYAGE 60
M R+ ++D+GL +TH A+VK PT+++ P+G+E G FL+LDLGGTNFRV+++ GE
Sbjct: 20 MRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKVGE 79
Query: 61 ------KFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP 114
+ +H+ Y I + MTG E LFDYI+E + +F+ + + +++ LPLGFTFSFP
Sbjct: 80 GEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFP 139
Query: 115 VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVEL 174
V + K G+L+ WTKGFK G G NVV L
Sbjct: 140 VRHEDIDK-----------------------------GILLNWTKGFKASGAEGNNVVGL 170
Query: 175 LQQALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFP 234
L+ A+ R R +F
Sbjct: 171 LRDAIKR------------------------------------------------RGDFE 182
Query: 235 VNVVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVIN 294
++VVA++NDT ++SC Y+ C++G+IVGTG NACY+E +NV E + + + +N
Sbjct: 183 MDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDEGR--MCVN 240
Query: 295 TEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGI 354
TEWGAFGD G LD L E+DR +D+ S N GQQ+YEK++ G YMGE+VRL++ + +E +
Sbjct: 241 TEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENL 300
Query: 355 LFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLC 414
LF+G+ S QL TRG F+T ++S +E +D GD N+L P T DC VR C
Sbjct: 301 LFHGEASEQLRTRGAFETRFVSQVE-SDTGDRKQIYNILSTLGLRPSTT--DCDIVRRAC 357
Query: 415 RVVSQRSAHLASAGIATLLNRM------DFSIVTVGVDGSVYRYHPYF 456
VS R+AH+ SAG+A ++NRM D +TVGVDGSVY+ HP F
Sbjct: 358 ESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSF 405
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E +NV E + + + +NTEWGAFGD G LD L E+DR +D+
Sbjct: 209 GMIVGTGCNACYMEEMQNVELVEGDEGR--MCVNTEWGAFGDSGELDEFLLEYDRLVDES 266
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
S N GQQ+YEK++ G YMGE+VRL++ + +E +LF+G+ S QL TRG F+T ++S +E+
Sbjct: 267 SANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVES 326
>pdb|3IMX|A Chain A, Crystal Structure Of Human Glucokinase In Complex With A
Synthetic Activator
Length = 455
Score = 332 bits (850), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 183/468 (39%), Positives = 260/468 (55%), Gaps = 94/468 (20%)
Query: 1 MSRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYAGE 60
M R+ ++D+GL +TH A+VK PT+++ P+G+E G FL+LDLGGTNFRV+++ GE
Sbjct: 24 MRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKVGE 83
Query: 61 ------KFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP 114
+ +H+ Y I + MTG E LFDYI+E + +F+ + + +++ LPLGFTFSFP
Sbjct: 84 GEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFP 143
Query: 115 VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVEL 174
V + K G+L+ WTKGFK G G NVV L
Sbjct: 144 VRHEDIDK-----------------------------GILLNWTKGFKASGAEGNNVVGL 174
Query: 175 LQQALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFP 234
L+ A+ R R +F
Sbjct: 175 LRDAIKR------------------------------------------------RGDFE 186
Query: 235 VNVVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVIN 294
++VVA++NDT ++SC Y+ C++G+IVGTG NACY+E +NV E + + + +N
Sbjct: 187 MDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDEGR--MCVN 244
Query: 295 TEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGI 354
TEWGAFGD G LD L E+DR +D+ S N GQQ+YEK++ G YMGE+VRL++ + +E +
Sbjct: 245 TEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENL 304
Query: 355 LFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLC 414
LF+G+ S QL TRG F+T ++S +E +D GD N+L P T DC VR C
Sbjct: 305 LFHGEASEQLRTRGAFETRFVSQVE-SDTGDRKQIYNILSTLGLRPSTT--DCDIVRRAC 361
Query: 415 RVVSQRSAHLASAGIATLLNRM------DFSIVTVGVDGSVYRYHPYF 456
VS R+AH+ SAG+A ++NRM D +TVGVDGSVY+ HP F
Sbjct: 362 ESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSF 409
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E +NV E + + + +NTEWGAFGD G LD L E+DR +D+
Sbjct: 213 GMIVGTGCNACYMEEMQNVELVEGDEGR--MCVNTEWGAFGDSGELDEFLLEYDRLVDES 270
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
S N GQQ+YEK++ G YMGE+VRL++ + +E +LF+G+ S QL TRG F+T ++S +E+
Sbjct: 271 SANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVES 330
>pdb|3QIC|A Chain A, The Structure Of Human Glucokinase E339k Mutation
Length = 470
Score = 328 bits (841), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 181/468 (38%), Positives = 259/468 (55%), Gaps = 94/468 (20%)
Query: 1 MSRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYAGE 60
M R+ ++D+GL +TH A+VK PT+++ P+G+E G FL+LDLGGTNFRV+++ GE
Sbjct: 39 MRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKVGE 98
Query: 61 ------KFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP 114
+ +H+ Y I + MTG E LFDYI+E + +F+ + + +++ LPLGFTFSFP
Sbjct: 99 GEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFP 158
Query: 115 VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVEL 174
V + K G+L+ WTKGFK G G NVV L
Sbjct: 159 VRHEDIDK-----------------------------GILLNWTKGFKASGAEGNNVVGL 189
Query: 175 LQQALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFP 234
L+ A+ R R +F
Sbjct: 190 LRDAIKR------------------------------------------------RGDFE 201
Query: 235 VNVVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVIN 294
++VVA++NDT ++SC Y+ C++G+IVGTG NACY+E +NV E + + + +N
Sbjct: 202 MDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDEGR--MCVN 259
Query: 295 TEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGI 354
TEWGAFGD G LD L E+DR +D+ S N GQQ+YEK++ G YMGE+VRL++ + +E +
Sbjct: 260 TEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENL 319
Query: 355 LFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLC 414
LF+G+ S QL TRG F+T ++S ++ +D GD N+L P T DC VR C
Sbjct: 320 LFHGEASEQLRTRGAFETRFVSQVK-SDTGDRKQIYNILSTLGLRPSTT--DCDIVRRAC 376
Query: 415 RVVSQRSAHLASAGIATLLNRM------DFSIVTVGVDGSVYRYHPYF 456
VS R+AH+ SAG+A ++NRM D +TVGVDG VY+ HP F
Sbjct: 377 ESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGXVYKLHPSF 424
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E +NV E + + + +NTEWGAFGD G LD L E+DR +D+
Sbjct: 228 GMIVGTGCNACYMEEMQNVELVEGDEGR--MCVNTEWGAFGDSGELDEFLLEYDRLVDES 285
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
S N GQQ+YEK++ G YMGE+VRL++ + +E +LF+G+ S QL TRG F+T ++S +++
Sbjct: 286 SANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVKS 345
>pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
pdb|1HKB|B Chain B, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
Length = 917
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/475 (38%), Positives = 265/475 (55%), Gaps = 92/475 (19%)
Query: 3 RLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLM--IYAGE 60
R+ A+++ GL K TH A VK P+F++ P GTE G FLALDLGGTNFRVL+ I +G+
Sbjct: 490 RMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRSGK 549
Query: 61 K--FRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVDMM 118
K M +K Y I EIM G GE+LFD+I + +F+ + +PLGFTFSFP
Sbjct: 550 KRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKGPRMPLGFTFSFPCQQT 609
Query: 119 SLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQA 178
SL G+L+ WTKGFK VG +VV LL+ A
Sbjct: 610 SL-----------------------------DAGILITWTKGFKATDCVGHDVVTLLRDA 640
Query: 179 LVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVV 238
+ R R F ++VV
Sbjct: 641 IKR------------------------------------------------REEFDLDVV 652
Query: 239 AILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWG 298
A++NDT G +++CAY+ C++G+IVGTG NACY+E +NV E + + + IN EWG
Sbjct: 653 AVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQGQ--MCINMEWG 710
Query: 299 AFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNG 358
AFGD+G LD + T +DR +D+ SLN G+Q YEKM+SGMY+GEIVR ++ FT++G LF G
Sbjct: 711 AFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRG 770
Query: 359 KGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVS 418
+ S L TRGIF+T ++S IE+ + + + + Q+L L ++T D I V+ +C VVS
Sbjct: 771 QISETLKTRGIFETKFLSQIESDRLALLQV--RAILQQLGL-NSTCDDSILVKTVCGVVS 827
Query: 419 QRSAHLASAGIATLLNR------MDFSIVTVGVDGSVYRYHPYFHHMMLEKIPAL 467
+R+A L AG+A ++++ +D VTVGVDG++Y+ HP+F +M + + L
Sbjct: 828 RRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL 882
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/502 (35%), Positives = 274/502 (54%), Gaps = 104/502 (20%)
Query: 1 MSRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYA-- 58
M+R ++ GL +D + TATVK PTF++ +P G+E G F+ALDLGG++FR+L +
Sbjct: 40 MTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNH 99
Query: 59 --GEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVD 116
+ ME + Y I+ G G QLFD++AE L +F+ ++K +++ LP+GFTFSFP
Sbjct: 100 EKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFTFSFPCQ 159
Query: 117 MMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQ 176
+ + +L+ WTK FK GV GA+VV+LL
Sbjct: 160 QSKIDEA-----------------------------ILITWTKRFKASGVEGADVVKLLN 190
Query: 177 QALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVN 236
+A+ + R ++ N
Sbjct: 191 KAIKK------------------------------------------------RGDYDAN 202
Query: 237 VVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTE 296
+VA++NDT G +++C YD +HC++G+I+GTG NACY+E ++ E + + + INTE
Sbjct: 203 IVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDEGR--MCINTE 260
Query: 297 WGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILF 356
WGAFGDDG+L+ + TEFDR ID SLN G+Q++EKMVSGMY+GE+VRL++ K +EG+LF
Sbjct: 261 WGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLF 320
Query: 357 NGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRV 416
G+ + +L TRG F+T +S IE G + + +L + P + DC+ V+++C +
Sbjct: 321 EGRITPELLTRGKFNTSDVSAIEKNKEG-LHNAKEILTRLGVEP--SDDDCVSVQHVCTI 377
Query: 417 VSQRSAHLASAGIATLLNRMDFSI------VTVGVDGSVYRYHPY----FHHMMLEKIPA 466
VS RSA+L +A + +LNR+ + TVGVDGS+Y+ HP FH + +P
Sbjct: 378 VSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPD 437
Query: 467 -----LISHSVIVGTGFNACYV 483
L+S S G+G A V
Sbjct: 438 SDVRFLLSES---GSGKGAAMV 456
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E +NV E + + + IN EWGAFGD+G LD + T +DR +D+
Sbjct: 675 GLIVGTGSNACYMEEMKNVEMVEGDQGQ--MCINMEWGAFGDNGCLDDIRTHYDRLVDEY 732
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
SLN G+Q YEKM+SGMY+GEIVR ++ FT++G LF G+ S L TRGIF+T ++S IE+
Sbjct: 733 SLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIES 792
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 88/119 (73%), Gaps = 2/119 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+I+GTG NACY+E ++ E + + + INTEWGAFGDDG+L+ + TEFDR ID
Sbjct: 227 GLIIGTGTNACYMEELRHIDLVEGDEGR--MCINTEWGAFGDDGSLEDIRTEFDREIDRG 284
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIE 589
SLN G+Q++EKMVSGMY+GE+VRL++ K +EG+LF G+ + +L TRG F+T +S IE
Sbjct: 285 SLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIE 343
>pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I
Complexed With Glucose, Glucose-6-Phosphate, And Adp
Length = 917
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/475 (38%), Positives = 265/475 (55%), Gaps = 92/475 (19%)
Query: 3 RLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLM--IYAGE 60
R+ A+++ GL K TH A VK P+F++ P GTE G FLALDLGGTNFRVL+ I +G+
Sbjct: 490 RMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRSGK 549
Query: 61 K--FRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVDMM 118
K M +K Y I EIM G GE+LFD+I + +F+ + +PLGFTFSFP
Sbjct: 550 KRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKGPRMPLGFTFSFPCQQT 609
Query: 119 SLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQA 178
SL G+L+ WTKGFK VG +VV LL+ A
Sbjct: 610 SL-----------------------------DAGILITWTKGFKATDCVGHDVVTLLRDA 640
Query: 179 LVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVV 238
+ R R F ++VV
Sbjct: 641 IKR------------------------------------------------REEFDLDVV 652
Query: 239 AILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWG 298
A++NDT G +++CAY+ C++G+IVGTG NACY+E +NV E + + + IN EWG
Sbjct: 653 AVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQGQ--MCINMEWG 710
Query: 299 AFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNG 358
AFGD+G LD + T +DR +D+ SLN G+Q YEKM+SGMY+GEIVR ++ FT++G LF G
Sbjct: 711 AFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRG 770
Query: 359 KGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVS 418
+ S L TRGIF+T ++S IE+ + + + + Q+L L ++T D I V+ +C VVS
Sbjct: 771 QISETLKTRGIFETKFLSQIESDRLALLQV--RAILQQLGL-NSTCDDSILVKTVCGVVS 827
Query: 419 QRSAHLASAGIATLLNR------MDFSIVTVGVDGSVYRYHPYFHHMMLEKIPAL 467
+R+A L AG+A ++++ +D VTVGVDG++Y+ HP+F +M + + L
Sbjct: 828 RRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL 882
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 180/502 (35%), Positives = 274/502 (54%), Gaps = 104/502 (20%)
Query: 1 MSRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYA-- 58
M+R ++ GL +D + TATVK PTF++ +P G+E G F+ALDLGG++FR+L +
Sbjct: 40 MTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNH 99
Query: 59 --GEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVD 116
+ ME + Y I+ G G QLFD++AE L +F+ ++K +++ LP+GFTFSFP
Sbjct: 100 EKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFTFSFPCQ 159
Query: 117 MMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQ 176
+ + +L+ WTK FK GV GA+VV+LL
Sbjct: 160 QSKIDEA-----------------------------ILITWTKRFKASGVEGADVVKLLN 190
Query: 177 QALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVN 236
+A+ + R ++ N
Sbjct: 191 KAIKK------------------------------------------------RGDYDAN 202
Query: 237 VVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTE 296
+VA++NDT G +++C YD +HC++G+I+GTG NACY+E ++ E + + + INTE
Sbjct: 203 IVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDEGR--MCINTE 260
Query: 297 WGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILF 356
WGAFGDDG+L+ + TEFDR ID SLN G+Q++EKMVSGMY+GE+VRL++ K +EG+LF
Sbjct: 261 WGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLF 320
Query: 357 NGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRV 416
G+ + +L TRG F+T +S IE G + + +L + P + DC+ V+++C +
Sbjct: 321 EGRITPELLTRGKFNTSDVSAIEKNKEG-LHNAKEILTRLGVEP--SDDDCVSVQHVCTI 377
Query: 417 VSQRSAHLASAGIATLLNRMDFSI------VTVGVDGSVYRYHPY----FHHMMLEKIPA 466
VS RSA+L +A + +LNR+ + TVGVDGS+Y+ HP FH + +P
Sbjct: 378 VSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPD 437
Query: 467 -----LISHSVIVGTGFNACYV 483
L+S S G+G A V
Sbjct: 438 SDVRFLLSES---GSGKGAAMV 456
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E +NV E + + + IN EWGAFGD+G LD + T +DR +D+
Sbjct: 675 GLIVGTGSNACYMEEMKNVEMVEGDQGQ--MCINMEWGAFGDNGCLDDIRTHYDRLVDEY 732
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
SLN G+Q YEKM+SGMY+GEIVR ++ FT++G LF G+ S L TRGIF+T ++S IE+
Sbjct: 733 SLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIES 792
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 88/119 (73%), Gaps = 2/119 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+I+GTG NACY+E ++ E + + + INTEWGAFGDDG+L+ + TEFDR ID
Sbjct: 227 GLIIGTGTNACYMEELRHIDLVEGDEGR--MCINTEWGAFGDDGSLEDIRTEFDRAIDAY 284
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIE 589
SLN G+Q++EKMVSGMY+GE+VRL++ K +EG+LF G+ + +L TRG F+T +S IE
Sbjct: 285 SLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIE 343
>pdb|2NZT|A Chain A, Crystal Structure Of Human Hexokinase Ii
pdb|2NZT|B Chain B, Crystal Structure Of Human Hexokinase Ii
Length = 902
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/481 (38%), Positives = 264/481 (54%), Gaps = 104/481 (21%)
Query: 3 RLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMI------ 56
R+ ++++GL K+THA+A VK PT++ P GTE G FLALDLGGTNFRVL++
Sbjct: 476 RMKVEMERGLSKETHASAPVKMLPTYVCATPDGTEKGDFLALDLGGTNFRVLLVRVRNGK 535
Query: 57 YAGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVD 116
+ G M +K Y I E+M G G++LFD+I + + +F+ + LPLGFTFSFP
Sbjct: 536 WGG--VEMHNKIYAIPQEVMHGTGDELFDHIVQCIADFLEYMGMKGVSLPLGFTFSFPCQ 593
Query: 117 MMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQ 176
SL + +L++WTKGFK G G +VV LL+
Sbjct: 594 QNSLDE-----------------------------SILLKWTKGFKASGCEGEDVVTLLK 624
Query: 177 QALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVN 236
+A+ R R F ++
Sbjct: 625 EAIHR------------------------------------------------REEFDLD 636
Query: 237 VVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTE 296
VVA++NDT G +++C ++ HC++G+IVGTG NACY+E NV E E + + +N E
Sbjct: 637 VVAVVNDTVGTMMTCGFEDPHCEVGLIVGTGSNACYMEEMRNVELVEGEEGR--MCVNME 694
Query: 297 WGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILF 356
WGAFGD+G LD TEFD +D+ SLN G+Q +EKM+SGMY+GEIVR ++ FT+ G+LF
Sbjct: 695 WGAFGDNGCLDDFRTEFDVAVDELSLNPGKQRFEKMISGMYLGEIVRNILIDFTKRGLLF 754
Query: 357 NGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPH----ATAQDCIDVRY 412
G+ S +L TRGIF+T ++S IE S C +L R L H +T D I V+
Sbjct: 755 RGRISERLKTRGIFETKFLSQIE-------SDCLALLQVRAILQHLGLESTCDDSIIVKE 807
Query: 413 LCRVVSQRSAHLASAGIATLLNR------MDFSIVTVGVDGSVYRYHPYFHHMMLEKIPA 466
+C VV++R+A L AG+A +++R +D VTVGVDG++Y+ HP+F +M E +
Sbjct: 808 VCTVVARRAAQLCGAGMAAVVDRIRENRGLDALKVTVGVDGTLYKLHPHFAKVMHETVKD 867
Query: 467 L 467
L
Sbjct: 868 L 868
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 188/476 (39%), Positives = 262/476 (55%), Gaps = 92/476 (19%)
Query: 3 RLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYAG--- 59
R +++KGL TH TA VK PTF++ P GTE G+FLALDLGGTNFRVL +
Sbjct: 28 RFRKEMEKGLGATTHPTAAVKMLPTFVRSTPDGTEHGEFLALDLGGTNFRVLWVKVTDNG 87
Query: 60 -EKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVDMM 118
+K ME++ Y I +IM G G QLFD+IAE L NF+ + + +++ LPLGFTFSFP
Sbjct: 88 LQKVEMENQIYAIPEDIMRGSGTQLFDHIAECLANFMDKLQIKDKKLPLGFTFSFPCHQT 147
Query: 119 SLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQA 178
L + LV WTKGFK GV G +VV L+++A
Sbjct: 148 KLDE-----------------------------SFLVSWTKGFKSSGVEGRDVVALIRKA 178
Query: 179 LVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVV 238
+ R R +F +++V
Sbjct: 179 IQR------------------------------------------------RGDFDIDIV 190
Query: 239 AILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWG 298
A++NDT G +++C YD +C+IG+IVGTG NACY+E ++ E + + + IN EWG
Sbjct: 191 AVVNDTVGTMMTCGYDDHNCEIGLIVGTGSNACYMEEMRHIDMVEGDEGR--MCINMEWG 248
Query: 299 AFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNG 358
AFGDDG+L+ + TEFD+ ID SLN G+Q++EKM+SGMYMGE+VRL++ K +E +LF G
Sbjct: 249 AFGDDGSLNDIRTEFDQEIDMGSLNPGKQLFEKMISGMYMGELVRLILVKMAKEELLFGG 308
Query: 359 KGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVS 418
K S +L G F+T IS IE G I R VL RL L T +DC+ +C++VS
Sbjct: 309 KLSPELLNTGRFETKDISDIEGEKDG-IRKAREVLM-RLGLD-PTQEDCVATHRICQIVS 365
Query: 419 QRSAHLASAGIATLLNRMDFSI------VTVGVDGSVYRYHPYFHHMMLEKIPALI 468
RSA L +A +A +L R+ + T+GVDGSVY+ HP+F + + + L+
Sbjct: 366 TRSASLCAATLAAVLQRIKENKGEERLRSTIGVDGSVYKKHPHFAKRLHKTVRRLV 421
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E NV E E + + +N EWGAFGD+G LD TEFD +D+
Sbjct: 661 GLIVGTGSNACYMEEMRNVELVEGEEGR--MCVNMEWGAFGDNGCLDDFRTEFDVAVDEL 718
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
SLN G+Q +EKM+SGMY+GEIVR ++ FT+ G+LF G+ S +L TRGIF+T ++S IE+
Sbjct: 719 SLNPGKQRFEKMISGMYLGEIVRNILIDFTKRGLLFRGRISERLKTRGIFETKFLSQIES 778
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 84/120 (70%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E ++ E + + + IN EWGAFGDDG+L+ + TEFD+ ID
Sbjct: 213 GLIVGTGSNACYMEEMRHIDMVEGDEGR--MCINMEWGAFGDDGSLNDIRTEFDQEIDMG 270
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
SLN G+Q++EKM+SGMYMGE+VRL++ K +E +LF GK S +L G F+T IS IE
Sbjct: 271 SLNPGKQLFEKMISGMYMGELVRLILVKMAKEELLFGGKLSPELLNTGRFETKDISDIEG 330
>pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With
Glucose And Adp In The Active Site
Length = 917
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/475 (38%), Positives = 264/475 (55%), Gaps = 92/475 (19%)
Query: 3 RLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLM--IYAGE 60
R+ A+++ GL K TH A VK P+F++ P GTE G FLALDLGG NFRVL+ I +G+
Sbjct: 490 RMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGANFRVLLVKIRSGK 549
Query: 61 K--FRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVDMM 118
K M +K Y I EIM G GE+LFD+I + +F+ + +PLGFTFSFP
Sbjct: 550 KRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKGPRMPLGFTFSFPCQQT 609
Query: 119 SLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQA 178
SL G+L+ WTKGFK VG +VV LL+ A
Sbjct: 610 SL-----------------------------DAGILITWTKGFKATDCVGHDVVTLLRDA 640
Query: 179 LVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVV 238
+ R R F ++VV
Sbjct: 641 IKR------------------------------------------------REEFDLDVV 652
Query: 239 AILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWG 298
A++NDT G +++CAY+ C++G+IVGTG NACY+E +NV E + + + IN EWG
Sbjct: 653 AVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQGQ--MCINMEWG 710
Query: 299 AFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNG 358
AFGD+G LD + T +DR +D+ SLN G+Q YEKM+SGMY+GEIVR ++ FT++G LF G
Sbjct: 711 AFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRG 770
Query: 359 KGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVS 418
+ S L TRGIF+T ++S IE+ + + + + Q+L L ++T D I V+ +C VVS
Sbjct: 771 QISETLKTRGIFETKFLSQIESDRLALLQV--RAILQQLGL-NSTCDDSILVKTVCGVVS 827
Query: 419 QRSAHLASAGIATLLNR------MDFSIVTVGVDGSVYRYHPYFHHMMLEKIPAL 467
+R+A L AG+A ++++ +D VTVGVDG++Y+ HP+F +M + + L
Sbjct: 828 RRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL 882
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/502 (35%), Positives = 274/502 (54%), Gaps = 104/502 (20%)
Query: 1 MSRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYA-- 58
M+R ++ GL +D + TATVK PTF++ +P G+E G F+ALDLGG++FR+L +
Sbjct: 40 MTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNH 99
Query: 59 --GEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVD 116
+ ME + Y I+ G G QLFD++AE L +F+ ++K +++ LP+GFTFSFP
Sbjct: 100 EKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFTFSFPCQ 159
Query: 117 MMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQ 176
+ + +L+ WTK FK GV GA+VV+LL
Sbjct: 160 QSKIDEA-----------------------------ILITWTKRFKASGVEGADVVKLLN 190
Query: 177 QALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVN 236
+A+ + R ++ N
Sbjct: 191 KAIKK------------------------------------------------RGDYDAN 202
Query: 237 VVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTE 296
+VA++NDT G +++C YD +HC++G+I+GTG NACY+E ++ E + + + INTE
Sbjct: 203 IVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDEGR--MCINTE 260
Query: 297 WGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILF 356
WGAFGDDG+L+ + TEFDR ID SLN G+Q++EKMVSGMY+GE+VRL++ K +EG+LF
Sbjct: 261 WGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLF 320
Query: 357 NGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRV 416
G+ + +L TRG F+T +S IE G + + +L + P + DC+ V+++C +
Sbjct: 321 EGRITPELLTRGKFNTSDVSAIEKNKEG-LHNAKEILTRLGVEP--SDDDCVSVQHVCTI 377
Query: 417 VSQRSAHLASAGIATLLNRMDFSI------VTVGVDGSVYRYHPY----FHHMMLEKIPA 466
VS RSA+L +A + +LNR+ + TVGVDGS+Y+ HP FH + +P
Sbjct: 378 VSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPD 437
Query: 467 -----LISHSVIVGTGFNACYV 483
L+S S G+G A V
Sbjct: 438 SDVRFLLSES---GSGKGAAMV 456
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E +NV E + + + IN EWGAFGD+G LD + T +DR +D+
Sbjct: 675 GLIVGTGSNACYMEEMKNVEMVEGDQGQ--MCINMEWGAFGDNGCLDDIRTHYDRLVDEY 732
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
SLN G+Q YEKM+SGMY+GEIVR ++ FT++G LF G+ S L TRGIF+T ++S IE+
Sbjct: 733 SLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIES 792
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 88/119 (73%), Gaps = 2/119 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+I+GTG NACY+E ++ E + + + INTEWGAFGDDG+L+ + TEFDR ID
Sbjct: 227 GLIIGTGTNACYMEELRHIDLVEGDEGR--MCINTEWGAFGDDGSLEDIRTEFDRAIDAY 284
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIE 589
SLN G+Q++EKMVSGMY+GE+VRL++ K +EG+LF G+ + +L TRG F+T +S IE
Sbjct: 285 SLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIE 343
>pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose
And Phosphate
pdb|1QHA|A Chain A, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
pdb|1QHA|B Chain B, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
Length = 917
Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/475 (38%), Positives = 265/475 (55%), Gaps = 92/475 (19%)
Query: 3 RLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLM--IYAGE 60
R+ A+++ GL K TH A VK P+F++ P GTE G FLALDLGGTNFRVL+ I +G+
Sbjct: 490 RMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRSGK 549
Query: 61 K--FRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVDMM 118
K M +K Y I EIM G GE+LFD+I + +F+ + +PLGFTFSFP
Sbjct: 550 KRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKGPRMPLGFTFSFPCQQT 609
Query: 119 SLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQA 178
SL G+L+ WTKGFK VG +VV LL+ A
Sbjct: 610 SL-----------------------------DAGILITWTKGFKATDCVGHDVVTLLRDA 640
Query: 179 LVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVV 238
+ R R F ++VV
Sbjct: 641 IKR------------------------------------------------REEFDLDVV 652
Query: 239 AILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWG 298
A++NDT G +++CAY+ C++G+IVGTG NACY+E +NV E + + + IN EWG
Sbjct: 653 AVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQGQ--MCINMEWG 710
Query: 299 AFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNG 358
AFGD+G LD + T +DR +++ SLN G+Q YEKM+SGMY+GEIVR ++ FT++G LF G
Sbjct: 711 AFGDNGCLDDIRTHYDRLVNEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRG 770
Query: 359 KGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVS 418
+ S L TRGIF+T ++S IE+ + + + + Q+L L ++T D I V+ +C VVS
Sbjct: 771 QISETLKTRGIFETKFLSQIESDRLALLQV--RAILQQLGL-NSTCDDSILVKTVCGVVS 827
Query: 419 QRSAHLASAGIATLLNR------MDFSIVTVGVDGSVYRYHPYFHHMMLEKIPAL 467
+R+A L AG+A ++++ +D VTVGVDG++Y+ HP+F +M + + L
Sbjct: 828 RRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL 882
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/502 (35%), Positives = 274/502 (54%), Gaps = 104/502 (20%)
Query: 1 MSRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYA-- 58
M+R ++ GL +D + TATVK PTF++ +P G+E G F+ALDLGG++FR+L +
Sbjct: 40 MTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNH 99
Query: 59 --GEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVD 116
+ ME + Y I+ G G QLFD++AE L +F+ ++K +++ LP+GFTFSFP
Sbjct: 100 EKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFTFSFPCQ 159
Query: 117 MMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQ 176
+ + +L+ WTK FK GV GA+VV+LL
Sbjct: 160 QSKIDEA-----------------------------ILITWTKRFKASGVEGADVVKLLN 190
Query: 177 QALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVN 236
+A+ + R ++ N
Sbjct: 191 KAIKK------------------------------------------------RGDYDAN 202
Query: 237 VVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTE 296
+VA++NDT G +++C YD +HC++G+I+GTG NACY+E ++ E + + + INTE
Sbjct: 203 IVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDEGR--MCINTE 260
Query: 297 WGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILF 356
WGAFGDDG+L+ + TEFDR ID SLN G+Q++EKMVSGMY+GE+VRL++ K +EG+LF
Sbjct: 261 WGAFGDDGSLEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLF 320
Query: 357 NGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRV 416
G+ + +L TRG F+T +S IE G + + +L + P + DC+ V+++C +
Sbjct: 321 EGRITPELLTRGKFNTSDVSAIEKNKEG-LHNAKEILTRLGVEP--SDDDCVSVQHVCTI 377
Query: 417 VSQRSAHLASAGIATLLNRMDFSI------VTVGVDGSVYRYHPY----FHHMMLEKIPA 466
VS RSA+L +A + +LNR+ + TVGVDGS+Y+ HP FH + +P
Sbjct: 378 VSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPD 437
Query: 467 -----LISHSVIVGTGFNACYV 483
L+S S G+G A V
Sbjct: 438 SDVRFLLSES---GSGKGAAMV 456
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 88/119 (73%), Gaps = 2/119 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+I+GTG NACY+E ++ E + + + INTEWGAFGDDG+L+ + TEFDR ID
Sbjct: 227 GLIIGTGTNACYMEELRHIDLVEGDEGR--MCINTEWGAFGDDGSLEDIRTEFDREIDRG 284
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIE 589
SLN G+Q++EKMVSGMY+GE+VRL++ K +EG+LF G+ + +L TRG F+T +S IE
Sbjct: 285 SLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIE 343
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E +NV E + + + IN EWGAFGD+G LD + T +DR +++
Sbjct: 675 GLIVGTGSNACYMEEMKNVEMVEGDQGQ--MCINMEWGAFGDNGCLDDIRTHYDRLVNEY 732
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
SLN G+Q YEKM+SGMY+GEIVR ++ FT++G LF G+ S L TRGIF+T ++S IE+
Sbjct: 733 SLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIES 792
>pdb|1BG3|A Chain A, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
pdb|1BG3|B Chain B, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
Length = 918
Score = 322 bits (824), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 182/475 (38%), Positives = 266/475 (56%), Gaps = 92/475 (19%)
Query: 3 RLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLM--IYAGE 60
RL +++ GL K+T++ ATVK P+F++ +P GTE G FLALDLGGTNFRVL+ I +G+
Sbjct: 490 RLRTEMEMGLRKETNSKATVKMLPSFVRSIPDGTEHGDFLALDLGGTNFRVLLVKIRSGK 549
Query: 61 K--FRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVDMM 118
K M +K Y I EIM G G++LFD+I + +F+ + +PLGFTFSFP
Sbjct: 550 KRTVEMHNKIYSIPLEIMQGTGDELFDHIVSCISDFLDYMGIKGPRMPLGFTFSFPCHQT 609
Query: 119 SLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQA 178
+L G+L+ WTKGFK G +V LL+ A
Sbjct: 610 NL-----------------------------DCGILISWTKGFKATDCEGHDVASLLRDA 640
Query: 179 LVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVV 238
+ R R F ++VV
Sbjct: 641 VKR------------------------------------------------REEFDLDVV 652
Query: 239 AILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWG 298
A++NDT G +++CAY+ C+IG+IVGTG NACY+E +NV E N+ + IN EWG
Sbjct: 653 AVVNDTVGTMMTCAYEEPTCEIGLIVGTGTNACYMEEMKNVEMV--EGNQGQMCINMEWG 710
Query: 299 AFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNG 358
AFGD+G LD + T+FD+ +D+ SLN G+Q +EKM+SGMY+GEIVR ++ FT++G LF G
Sbjct: 711 AFGDNGCLDDIRTDFDKVVDEYSLNSGKQRFEKMISGMYLGEIVRNILIDFTKKGFLFRG 770
Query: 359 KGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVS 418
+ S L TRGIF+T ++S IE+ + + + + Q+L L ++T D I V+ +C VVS
Sbjct: 771 QISEPLKTRGIFETKFLSQIESDRLALLQV--RAILQQLGL-NSTCDDSILVKTVCGVVS 827
Query: 419 QRSAHLASAGIATLLNR------MDFSIVTVGVDGSVYRYHPYFHHMMLEKIPAL 467
+R+A L AG+A ++ + +D VTVGVDG++Y+ HP+F +M + + L
Sbjct: 828 KRAAQLCGAGMAAVVEKIRENRGLDHLNVTVGVDGTLYKLHPHFSRIMHQTVKEL 882
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 180/502 (35%), Positives = 274/502 (54%), Gaps = 104/502 (20%)
Query: 1 MSRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYA-- 58
++R ++ GL +D + TA+VK PTF++ +P G+E G F+ALDLGG++FR+L +
Sbjct: 40 LTRFKKEMKNGLSRDYNPTASVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNH 99
Query: 59 --GEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVD 116
+ ME + Y I+ G G QLFD++A+ L +F+ ++K +++ LP+GFTFSFP
Sbjct: 100 EKNQNVSMESEIYDTPENIVHGSGTQLFDHVADCLGDFMEKKKIKDKKLPVGFTFSFPCR 159
Query: 117 MMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQ 176
+ + VL+ WTK FK GV GA+VV+LL
Sbjct: 160 QSKIDEA-----------------------------VLITWTKRFKASGVEGADVVKLLN 190
Query: 177 QALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVN 236
+A+ + R ++ N
Sbjct: 191 KAIKK------------------------------------------------RGDYDAN 202
Query: 237 VVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTE 296
+VA++NDT G +++C YD + C++G+I+GTG NACY+E ++ E + + + INTE
Sbjct: 203 IVAVVNDTVGTMMTCGYDDQQCEVGLIIGTGTNACYMEELRHIDLVEGDEGR--MCINTE 260
Query: 297 WGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILF 356
WGAFGDDG+L+ + TEFDR +D SLN G+Q++EKMVSGMYMGE+VRL++ K +EG+LF
Sbjct: 261 WGAFGDDGSLEDIRTEFDRELDRGSLNPGKQLFEKMVSGMYMGELVRLILVKMAKEGLLF 320
Query: 357 NGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRV 416
G+ + +L TRG F+T +S IE G I + +L RL + + DC+ V+++C +
Sbjct: 321 EGRITPELLTRGKFNTSDVSAIEKDKEG-IQNAKEIL-TRLGVEPSDV-DCVSVQHICTI 377
Query: 417 VSQRSAHLASAGIATLLNRMDFSI------VTVGVDGSVYRYHPY----FHHMMLEKIPA 466
VS RSA+L +A + +LNR+ + TVGVDGS+Y+ HP FH + +P
Sbjct: 378 VSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKMHPQYSRRFHKTLRRLVPD 437
Query: 467 -----LISHSVIVGTGFNACYV 483
L+S S GTG A V
Sbjct: 438 SDVRFLLSES---GTGKGAAMV 456
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E +NV E N+ + IN EWGAFGD+G LD + T+FD+ +D+
Sbjct: 675 GLIVGTGTNACYMEEMKNVEMVE--GNQGQMCINMEWGAFGDNGCLDDIRTDFDKVVDEY 732
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
SLN G+Q +EKM+SGMY+GEIVR ++ FT++G LF G+ S L TRGIF+T ++S IE+
Sbjct: 733 SLNSGKQRFEKMISGMYLGEIVRNILIDFTKKGFLFRGQISEPLKTRGIFETKFLSQIES 792
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 88/119 (73%), Gaps = 2/119 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+I+GTG NACY+E ++ E + + + INTEWGAFGDDG+L+ + TEFDR +D
Sbjct: 227 GLIIGTGTNACYMEELRHIDLVEGDEGR--MCINTEWGAFGDDGSLEDIRTEFDRELDRG 284
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIE 589
SLN G+Q++EKMVSGMYMGE+VRL++ K +EG+LF G+ + +L TRG F+T +S IE
Sbjct: 285 SLNPGKQLFEKMVSGMYMGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIE 343
>pdb|1BDG|A Chain A, Hexokinase From Schistosoma Mansoni Complexed With Glucose
Length = 451
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 175/468 (37%), Positives = 241/468 (51%), Gaps = 82/468 (17%)
Query: 3 RLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIY---AG 59
R+ + GL K T+ +++K FP+++ P GTETG FLALDLGGTN+RVL + G
Sbjct: 32 RMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLSVTLEGKG 91
Query: 60 EKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVDMMS 119
+ R++ +TY I E M+G G +LF YIAE+L +F+ +++ LGFTFSFP
Sbjct: 92 KSPRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMKDKKFDLGFTFSFPCVQKG 151
Query: 120 LTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQAL 179
LT LVRWTKGF +GV G NV ELLQ L
Sbjct: 152 LTH-----------------------------ATLVRWTKGFSADGVEGHNVAELLQTEL 182
Query: 180 VRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVA 239
+R V VA
Sbjct: 183 DKR-------------------------------------------------ELNVKCVA 193
Query: 240 ILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGA 299
++NDT G L SCA + C +G+IVGTG N Y+E + V + +P VVINTEWGA
Sbjct: 194 VVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMDG-VKEPEVVINTEWGA 252
Query: 300 FGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGK 359
FG+ G LD T+FD+++D SL+ G+Q+YEKMVSGMY+GE+VR ++ E+ ILF G
Sbjct: 253 FGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGD 312
Query: 360 GSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQ 419
+L R T Y++ +E + +L L +P D VRY C +V +
Sbjct: 313 LPERLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACEMVVK 372
Query: 420 RSAHLASAGIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPAL 467
R+A+LA AGIA +L R++ S VTVGVDGS+Y++HP F M + + L
Sbjct: 373 RAAYLAGAGIACILRRINRSEVTVGVDGSLYKFHPKFCERMTDMVDKL 420
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG N Y+E + V + +P VVINTEWGAFG+ G LD T+FD+++D
Sbjct: 215 GLIVGTGTNVAYIEDSSKVELMDG-VKEPEVVINTEWGAFGEKGELDCWRTQFDKSMDID 273
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIE 589
SL+ G+Q+YEKMVSGMY+GE+VR ++ E+ ILF G +L R T Y++ +E
Sbjct: 274 SLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDVE 332
>pdb|3HM8|A Chain A, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|B Chain B, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|C Chain C, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|D Chain D, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
Length = 445
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 175/496 (35%), Positives = 259/496 (52%), Gaps = 95/496 (19%)
Query: 1 MSRLNADIDKGLHKDTHATAT-VKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYAG 59
++ + A + K + K A+ ++ PTF++ P G+E G FLALDLGGTNFRVL++
Sbjct: 20 LAAVQAQMRKAMAKGLRGEASSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVT 79
Query: 60 EKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVDMMS 119
++ + Y I + G G+QLFD+I + + +F ++Q + LPLGFTFSFP +
Sbjct: 80 TGVQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLSGQSLPLGFTFSFPCRQLG 139
Query: 120 LTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQAL 179
L + G+L+ WTKGFK G +VV LL++A+
Sbjct: 140 LDQ-----------------------------GILLNWTKGFKASDCEGQDVVSLLREAI 170
Query: 180 VRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVA 239
RR VEL NVVA
Sbjct: 171 TRR-----------------------------------QAVEL-------------NVVA 182
Query: 240 ILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGA 299
I+NDT G ++SC Y+ C+IG+IVGTG NACY+E NV+ ++ + + IN EWGA
Sbjct: 183 IVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPGDSGR--MCINMEWGA 240
Query: 300 FGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGK 359
FGDDG+L L T FD ++D S+N G+Q +EKM+SGMY+GEIVR ++ T G+LF G+
Sbjct: 241 FGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQ 300
Query: 360 GSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQ 419
+L TR IF T ++S IE +D + R +L + L LP T+ D + V +C+ VSQ
Sbjct: 301 QIQRLQTRDIFKTKFLSEIE-SDSLALRQVRAIL-EDLGLP-LTSDDALMVLEVCQAVSQ 357
Query: 420 RSAHLASAGIATLLNR------MDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALISHSVI 473
R+A L AG+A ++ + ++ V+VGVDG++Y+ HP F ++ + L V+
Sbjct: 358 RAAQLCGAGVAAVVEKIRENRGLEELAVSVGVDGTLYKLHPRFSSLVAATVRELAPRCVV 417
Query: 474 V------GTGFNACYV 483
G+G A V
Sbjct: 418 TFLQSEDGSGKGAALV 433
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 82/120 (68%), Gaps = 2/120 (1%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 530
+IVGTG NACY+E NV+ ++ + + IN EWGAFGDDG+L L T FD ++D
Sbjct: 204 GLIVGTGTNACYMEELRNVAGVPGDSGR--MCINMEWGAFGDDGSLAMLSTRFDASVDQA 261
Query: 531 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEA 590
S+N G+Q +EKM+SGMY+GEIVR ++ T G+LF G+ +L TR IF T ++S IE+
Sbjct: 262 SINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQQIQRLQTRDIFKTKFLSEIES 321
>pdb|3O08|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I
pdb|3O08|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I
pdb|3O1B|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Ii
pdb|3O1W|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iii
pdb|3O1W|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iii
pdb|3O4W|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iv
pdb|3O4W|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iv
pdb|3O5B|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Vii
With Glucose Bound (Open State)
pdb|3O5B|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Vii
With Glucose Bound (Open State)
pdb|3O6W|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Viii
(Open State)
pdb|3O6W|B Chain B, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Viii
(Open State)
pdb|3O80|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Ix
(Open State)
pdb|3O8M|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Xi
With Glucose Bound (Closed State)
Length = 485
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 210/461 (45%), Gaps = 94/461 (20%)
Query: 6 ADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYAG--EKFR 63
+++DKGL K + P ++ + P G ETG FLALDLGGTN RV+++ G F
Sbjct: 50 SELDKGLSK---KGGNIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVLVKLGGNHDFD 106
Query: 64 MEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAE--NEHLPLGFTFSFPVDMMSLT 121
Y + + TG EQL+ +IA+ L+ FV E + +E LPLGFTFS+P +
Sbjct: 107 TTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDGVSEPLPLGFTFSYPASQKKIN 166
Query: 122 KVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVR 181
GVL RWTKGF EGV G +VV +LQ+
Sbjct: 167 S-----------------------------GVLQRWTKGFDIEGVEGHDVVPMLQEQ--- 194
Query: 182 RCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAIL 241
+ + N P+NVVA++
Sbjct: 195 ----------------------------------------------IEKLNIPINVVALI 208
Query: 242 NDTAGCLVSCAYDHKHCKIGVIVGTGFNACY------VERTENVSTFENEANKPFVVINT 295
NDT G LV+ Y K+G+I+GTG N Y +E+ E + + + P + IN
Sbjct: 209 NDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEGLLPEDIGPDSP-MAINC 267
Query: 296 EWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGIL 355
E+G+F D+ L T++D ID+ S GQQ +EKM SG Y+GEI+RL++ + G +
Sbjct: 268 EYGSF-DNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFI 326
Query: 356 FNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCR 415
F + +L + DT Y S IE ++ ++ L + + + +R L
Sbjct: 327 FKDQDISKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIETTVVERKL-IRKLAE 385
Query: 416 VVSQRSAHLASAGIATLLNRMDFSIVTVGVDGSVYRYHPYF 456
+V R+A L G++ + ++ + + DGSV+ +P +
Sbjct: 386 LVGTRAARLTVCGVSAICDKRGYKTAHIAADGSVFNRYPGY 426
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 471 SVIVGTGFNACY------VERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFD 524
+I+GTG N Y +E+ E + + + P + IN E+G+F D+ L T++D
Sbjct: 228 GIIIGTGVNGAYYDVVSGIEKLEGLLPEDIGPDSP-MAINCEYGSF-DNEHLVLPRTKYD 285
Query: 525 RTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMY 584
ID+ S GQQ +EKM SG Y+GEI+RL++ + G +F + +L + DT Y
Sbjct: 286 VIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQDISKLKEAYVMDTSY 345
Query: 585 ISTIE 589
S IE
Sbjct: 346 PSKIE 350
>pdb|1IG8|A Chain A, Crystal Structure Of Yeast Hexokinase Pii With The Correct
Amino Acid Sequence
Length = 486
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 210/464 (45%), Gaps = 95/464 (20%)
Query: 6 ADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIYAG--EKFR 63
++++KGL K + P ++ D P G E+G FLA+DLGGTN RV+++ G F
Sbjct: 50 SELEKGLSK---KGGNIPMIPGWVMDFPTGKESGDFLAIDLGGTNLRVVLVKLGGDRTFD 106
Query: 64 MEHKTYPISPEIM--TGPGEQLFDYIAESLENFVREQKAE--NEHLPLGFTFSFPVDMMS 119
Y + P+ M T ++L+++IA+SL+ F+ EQ + +E +PLGFTFSFP
Sbjct: 107 TTQSKYRL-PDAMRTTQNPDELWEFIADSLKAFIDEQFPQGISEPIPLGFTFSFPASQNK 165
Query: 120 LTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQAL 179
+ + G+L RWTKGF + +VV +LQ+ +
Sbjct: 166 INE-----------------------------GILQRWTKGFDIPNIENHDVVPMLQKQI 196
Query: 180 VRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVA 239
+R N P+ VVA
Sbjct: 197 TKR-------------------------------------------------NIPIEVVA 207
Query: 240 ILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPF-----VVIN 294
++NDT G LV+ Y K+GVI GTG N Y + ++ + + + + IN
Sbjct: 208 LINDTTGTLVASYYTDPETKMGVIFGTGVNGAYYDVCSDIEKLQGKLSDDIPPSAPMAIN 267
Query: 295 TEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGI 354
E+G+F D+ + T++D TID+ S GQQ +EKM SG Y+GEI+RL + ++G
Sbjct: 268 CEYGSF-DNEHVVLPRTKYDITIDEESPRPGQQTFEKMSSGYYLGEILRLALMDMYKQGF 326
Query: 355 LFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLC 414
+F + + + DT Y + IE ++ ++ + + T Q+ +R L
Sbjct: 327 IFKNQDLSKFDKPFVMDTSYPARIEEDPFENLEDTDDLFQNEFGI-NTTVQERKLIRRLS 385
Query: 415 RVVSQRSAHLASAGIATLLNRMDFSIVTVGVDGSVYRYHPYFHH 458
++ R+A L+ GIA + + + + DGSVY +P F
Sbjct: 386 ELIGARAARLSVCGIAAICQKRGYKTGHIAADGSVYNRYPGFKE 429
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 471 SVIVGTGFNACYVERTENVSTFENEANKPF-----VVINTEWGAFGDDGALDFLLTEFDR 525
VI GTG N Y + ++ + + + + IN E+G+F D+ + T++D
Sbjct: 229 GVIFGTGVNGAYYDVCSDIEKLQGKLSDDIPPSAPMAINCEYGSF-DNEHVVLPRTKYDI 287
Query: 526 TIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYI 585
TID+ S GQQ +EKM SG Y+GEI+RL + ++G +F + + + DT Y
Sbjct: 288 TIDEESPRPGQQTFEKMSSGYYLGEILRLALMDMYKQGFIFKNQDLSKFDKPFVMDTSYP 347
Query: 586 STIE 589
+ IE
Sbjct: 348 ARIE 351
>pdb|3B8A|X Chain X, Crystal Structure Of Yeast Hexokinase Pi In Complex With
Glucose
Length = 485
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 211/461 (45%), Gaps = 95/461 (20%)
Query: 7 DIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMI--YAGEKFRM 64
+++KGL T + P ++ + P G E+G +LA+DLGGTN RV+++ F
Sbjct: 51 ELNKGL---TKKGGNIPMIPGWVMEFPTGKESGNYLAIDLGGTNLRVVLVKLSGNHTFDT 107
Query: 65 EHKTYPISPEIMTGP-GEQLFDYIAESLENFVREQKAEN--EHLPLGFTFSFPVDMMSLT 121
Y + ++ T E+L+ +IA+SL++F+ EQ+ N + LPLGFTFS+P +
Sbjct: 108 TQSKYKLPHDMRTTKHQEELWSFIADSLKDFMVEQELLNTKDTLPLGFTFSYPASQNKIN 167
Query: 122 KVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVR 181
+ G+L RWTKGF V G +VV LLQ + +
Sbjct: 168 E-----------------------------GILQRWTKGFDIPNVEGHDVVPLLQNEISK 198
Query: 182 RCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAIL 241
R P+ +VA++
Sbjct: 199 R-------------------------------------------------ELPIEIVALI 209
Query: 242 NDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENE------ANKPFVVINT 295
NDT G L++ Y K+GVI GTG N + + ++ E + +N P + IN
Sbjct: 210 NDTVGTLIASYYTDPETKMGVIFGTGVNGAFYDVVSDIEKLEGKLADDIPSNSP-MAINC 268
Query: 296 EWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGIL 355
E+G+F D+ L T++D +D++S GQQ +EKM SG Y+GE++RL++ + E+G++
Sbjct: 269 EYGSF-DNEHLVLPRTKYDVAVDEQSPRPGQQAFEKMTSGYYLGELLRLVLLELNEKGLM 327
Query: 356 FNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCR 415
+ +L I DT Y + IE ++ ++ + + + + +R LC
Sbjct: 328 LKDQDLSKLKQPYIMDTSYPARIEDDPFENLEDTDDIFQKDFGVKTTLPERKL-IRRLCE 386
Query: 416 VVSQRSAHLASAGIATLLNRMDFSIVTVGVDGSVYRYHPYF 456
++ R+A LA GIA + + + + DGSVY +P F
Sbjct: 387 LIGTRAARLAVCGIAAICQKRGYKTGHIAADGSVYNKYPGF 427
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 471 SVIVGTGFNACYVERTENVSTFENE------ANKPFVVINTEWGAFGDDGALDFLLTEFD 524
VI GTG N + + ++ E + +N P + IN E+G+F D+ L T++D
Sbjct: 229 GVIFGTGVNGAFYDVVSDIEKLEGKLADDIPSNSP-MAINCEYGSF-DNEHLVLPRTKYD 286
Query: 525 RTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMY 584
+D++S GQQ +EKM SG Y+GE++RL++ + E+G++ + +L I DT Y
Sbjct: 287 VAVDEQSPRPGQQAFEKMTSGYYLGELLRLVLLELNEKGLMLKDQDLSKLKQPYIMDTSY 346
Query: 585 ISTIE 589
+ IE
Sbjct: 347 PARIE 351
>pdb|2BWX|A Chain A, His354ala Escherichia Coli Aminopeptidase P
Length = 441
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 10/128 (7%)
Query: 448 SVYRYH--PYFHHMMLEKIPALISHSVIVGTGFNACYVERTENVSTFENEANKPFVVINT 505
++ YH HH S++ IVG+G N C + TEN + + +
Sbjct: 205 GMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGCILHYTENECXEMRDGDLVLIDAGC 264
Query: 506 EWGAFGDDGALDFLL----TEFDRTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMME 557
E+ + D F + T+ R I D SL ++Y S + + GE+VR+M+
Sbjct: 265 EYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVS 324
Query: 558 KFTEEGIL 565
+ GIL
Sbjct: 325 GLVKLGIL 332
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 256 KHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----T 311
++ IVG+G N C + TEN + + + E+ + D F + T
Sbjct: 225 RYPSYNTIVGSGENGCILHYTENECXEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFT 284
Query: 312 EFDRTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 355
+ R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 285 QAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 332
>pdb|2BWT|A Chain A, Asp260ala Escherichia Coli Aminopeptidase P
Length = 440
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 469 SHSVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----TEFD 524
S++ IVG+G N C + TEN + + + E+ + D F + T+
Sbjct: 228 SYNTIVGSGENGCILHYTENECEMRD-GDLVLIAAGCEYKGYAGDITRTFPVNGKFTQAQ 286
Query: 525 RTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 565
R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 287 REIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 256 KHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----T 311
++ IVG+G N C + TEN + + + E+ + D F + T
Sbjct: 225 RYPSYNTIVGSGENGCILHYTENECEMRD-GDLVLIAAGCEYKGYAGDITRTFPVNGKFT 283
Query: 312 EFDRTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 355
+ R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 284 QAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 284 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 335
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 59 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 336 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 369
+ Y+ E ++M IL N +G +L G+
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 151
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 494 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 545
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 59 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 546 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 579
+ Y+ E ++M IL N +G +L G+
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 151
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 284 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 335
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 62 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 119
Query: 336 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 369
+ Y+ E ++M IL N +G +L G+
Sbjct: 120 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 154
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 494 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 545
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 62 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 119
Query: 546 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 579
+ Y+ E ++M IL N +G +L G+
Sbjct: 120 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 154
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 284 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 335
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 59 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 336 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 369
+ Y+ E ++M IL N +G +L G+
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 151
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 494 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 545
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 59 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 546 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 579
+ Y+ E ++M IL N +G +L G+
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 151
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 284 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 335
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 59 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 336 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 369
+ Y+ E ++M IL N +G +L G+
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 151
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 494 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 545
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 59 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 546 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 579
+ Y+ E ++M IL N +G +L G+
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 151
>pdb|1M7S|A Chain A, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
pdb|1M7S|B Chain B, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
pdb|1M7S|C Chain C, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
pdb|1M7S|D Chain D, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
Length = 484
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 655 PVIPEKKITQKVMNQAISNINRKSEESAKVKKLLMDKEKLIKETVLNETLLAYTD 709
P +PEKKI Q V+N+ + N +++E+ A L+ + ++ +L + +Y D
Sbjct: 280 PDVPEKKIGQMVLNKNVDNFFQETEQVAMAPANLVPGIEPSEDRLLQGRVFSYAD 334
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 284 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 335
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 121 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 178
Query: 336 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 369
+ Y+ E ++M IL N +G +L G+
Sbjct: 179 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 213
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 494 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 545
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 121 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 178
Query: 546 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 579
+ Y+ E ++M IL N +G +L G+
Sbjct: 179 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 213
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 284 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 335
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 59 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 336 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 369
+ Y+ E ++M IL N +G +L G+
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 151
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 494 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 545
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 59 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 546 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 579
+ Y+ E ++M IL N +G +L G+
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 151
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 284 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 335
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 59 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 336 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 369
+ Y+ E ++M IL N +G +L G+
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 151
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 494 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 545
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 59 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 546 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 579
+ Y+ E ++M IL N +G +L G+
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 151
>pdb|2V3Z|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P In Complex
With Substrate
Length = 440
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 469 SHSVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----TEFD 524
S++ IVG+G N C + TEN + + + E+ + D F + T+
Sbjct: 228 SYNTIVGSGENGCILHYTENEXEMRD-GDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQ 286
Query: 525 RTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 565
R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 287 REIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 256 KHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----T 311
++ IVG+G N C + TEN + + + E+ + D F + T
Sbjct: 225 RYPSYNTIVGSGENGCILHYTENEXEMRD-GDLVLIDAGCEYKGYAGDITRTFPVNGKFT 283
Query: 312 EFDRTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 355
+ R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 284 QAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
>pdb|2BWV|A Chain A, His361ala Escherichia Coli Aminopeptidase P
pdb|2V3Y|A Chain A, His361ala Escherichia Coli Aminopeptidase P In Complex
With Product
Length = 440
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 469 SHSVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----TEFD 524
S++ IVG+G N C + TEN + + + E+ + D F + T+
Sbjct: 228 SYNTIVGSGENGCILHYTENEXEMRD-GDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQ 286
Query: 525 RTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 565
R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 287 REIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 256 KHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----T 311
++ IVG+G N C + TEN + + + E+ + D F + T
Sbjct: 225 RYPSYNTIVGSGENGCILHYTENEXEMRD-GDLVLIDAGCEYKGYAGDITRTFPVNGKFT 283
Query: 312 EFDRTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 355
+ R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 284 QAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
>pdb|1WL9|A Chain A, Structure Of Aminopeptidase P From E. Coli
pdb|1W2M|A Chain A, Ca-Substituted Form Of E. Coli Aminopeptidase P
pdb|1W2M|B Chain B, Ca-Substituted Form Of E. Coli Aminopeptidase P
pdb|1W2M|C Chain C, Ca-Substituted Form Of E. Coli Aminopeptidase P
pdb|1W2M|D Chain D, Ca-Substituted Form Of E. Coli Aminopeptidase P
pdb|1W2M|E Chain E, Ca-Substituted Form Of E. Coli Aminopeptidase P
pdb|1W2M|F Chain F, Ca-Substituted Form Of E. Coli Aminopeptidase P
pdb|1W7V|A Chain A, Znmg Substituted Aminopeptidase P From E. Coli
pdb|1W7V|B Chain B, Znmg Substituted Aminopeptidase P From E. Coli
pdb|1W7V|C Chain C, Znmg Substituted Aminopeptidase P From E. Coli
pdb|1W7V|D Chain D, Znmg Substituted Aminopeptidase P From E. Coli
pdb|1WBQ|A Chain A, Zn Mg Substituted Aminopeptidase P From E. Coli
pdb|1WBQ|B Chain B, Zn Mg Substituted Aminopeptidase P From E. Coli
pdb|1WBQ|C Chain C, Zn Mg Substituted Aminopeptidase P From E. Coli
pdb|1WBQ|D Chain D, Zn Mg Substituted Aminopeptidase P From E. Coli
Length = 440
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 469 SHSVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----TEFD 524
S++ IVG+G N C + TEN + + + E+ + D F + T+
Sbjct: 228 SYNTIVGSGENGCILHYTENEXEMRD-GDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQ 286
Query: 525 RTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 565
R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 287 REIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 256 KHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----T 311
++ IVG+G N C + TEN + + + E+ + D F + T
Sbjct: 225 RYPSYNTIVGSGENGCILHYTENEXEMRD-GDLVLIDAGCEYKGYAGDITRTFPVNGKFT 283
Query: 312 EFDRTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 355
+ R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 284 QAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
>pdb|2BWY|A Chain A, Glu383ala Escherichia Coli Aminopeptidase P
Length = 440
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 469 SHSVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----TEFD 524
S++ IVG+G N C + TEN + + + E+ + D F + T+
Sbjct: 228 SYNTIVGSGENGCILHYTENECEMRD-GDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQ 286
Query: 525 RTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 565
R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 287 REIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 256 KHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----T 311
++ IVG+G N C + TEN + + + E+ + D F + T
Sbjct: 225 RYPSYNTIVGSGENGCILHYTENECEMRD-GDLVLIDAGCEYKGYAGDITRTFPVNGKFT 283
Query: 312 EFDRTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 355
+ R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 284 QAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
>pdb|1JAW|A Chain A, Aminopeptidase P From E. Coli Low Ph Form
Length = 440
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 469 SHSVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----TEFD 524
S++ IVG+G N C + TEN + + + E+ + D F + T+
Sbjct: 228 SYNTIVGSGENGCILHYTENECEMRD-GDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQ 286
Query: 525 RTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 565
R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 287 REIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 256 KHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----T 311
++ IVG+G N C + TEN + + + E+ + D F + T
Sbjct: 225 RYPSYNTIVGSGENGCILHYTENECEMRD-GDLVLIDAGCEYKGYAGDITRTFPVNGKFT 283
Query: 312 EFDRTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 355
+ R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 284 QAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
>pdb|2BWW|A Chain A, His350ala Escherichia Coli Aminopeptidase P
Length = 440
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 11/128 (8%)
Query: 448 SVYRYH--PYFHHMMLEKIPALISHSVIVGTGFNACYVERTENVSTFENEANKPFVVINT 505
++ YH HH S++ IVG+G N C + TEN + + +
Sbjct: 205 GMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGCILHYTENECEMRD-GDLVLIDAGC 263
Query: 506 EWGAFGDDGALDFLL----TEFDRTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMME 557
E+ + D F + T+ R I D SL ++Y S + + GE+VR+M+
Sbjct: 264 EYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVS 323
Query: 558 KFTEEGIL 565
+ GIL
Sbjct: 324 GLVKLGIL 331
Score = 29.6 bits (65), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 256 KHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----T 311
++ IVG+G N C + TEN + + + E+ + D F + T
Sbjct: 225 RYPSYNTIVGSGENGCILHYTENECEMRD-GDLVLIDAGCEYKGYAGDITRTFPVNGKFT 283
Query: 312 EFDRTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 355
+ R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 284 QAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 284 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 335
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 86 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 143
Query: 336 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 369
+ Y+ E ++M IL N +G +L G+
Sbjct: 144 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 178
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 494 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 545
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 86 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 143
Query: 546 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 579
+ Y+ E ++M IL N +G +L G+
Sbjct: 144 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 178
>pdb|1M35|A Chain A, Aminopeptidase P From Escherichia Coli
pdb|1M35|B Chain B, Aminopeptidase P From Escherichia Coli
pdb|1M35|C Chain C, Aminopeptidase P From Escherichia Coli
pdb|1M35|D Chain D, Aminopeptidase P From Escherichia Coli
pdb|1M35|E Chain E, Aminopeptidase P From Escherichia Coli
pdb|1M35|F Chain F, Aminopeptidase P From Escherichia Coli
pdb|1N51|A Chain A, Aminopeptidase P In Complex With The Inhibitor Apstatin
pdb|1WL6|A Chain A, Mg-Substituted Form Of E. Coli Aminopeptidase P
pdb|1WLR|A Chain A, Apo Aminopeptidase P From E. Coli
pdb|2BHA|A Chain A, E. Coli Aminopeptidase P In Complex With Substrate
pdb|2BHB|A Chain A, Zn Substituted E. Coli Aminopeptidase P
pdb|2BHC|A Chain A, Na Substituted E. Coli Aminopeptidase P
pdb|2BHD|A Chain A, Mg Substituted E. Coli Aminopeptidase P In Complex With
Product
pdb|1A16|A Chain A, Aminopeptidase P From E. Coli With The Inhibitor Pro-Leu
pdb|2BH3|A Chain A, Zn Substituted E.Coli Aminopeptidase P In Complex With
Product
pdb|2BN7|A Chain A, Mn Substituted E. Coli Aminopeptidase P In Complex With
Product And Zn
Length = 440
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 469 SHSVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----TEFD 524
S++ IVG+G N C + TEN + + + E+ + D F + T+
Sbjct: 228 SYNTIVGSGENGCILHYTENECEMRD-GDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQ 286
Query: 525 RTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 565
R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 287 REIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 256 KHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----T 311
++ IVG+G N C + TEN + + + E+ + D F + T
Sbjct: 225 RYPSYNTIVGSGENGCILHYTENECEMRD-GDLVLIDAGCEYKGYAGDITRTFPVNGKFT 283
Query: 312 EFDRTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 355
+ R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 284 QAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 284 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 335
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 78 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 135
Query: 336 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 369
+ Y+ E ++M IL N +G +L G+
Sbjct: 136 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 170
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 494 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM--------VSG 545
+E N P++V +GAF DG + + D D+ L + +I E++ + G
Sbjct: 78 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 135
Query: 546 M-YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 579
+ Y+ E ++M IL N +G +L G+
Sbjct: 136 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 170
>pdb|2BWS|A Chain A, His243ala Escherichia Coli Aminopeptidase P
pdb|2V3X|A Chain A, His243ala Escherichia Coli Aminopeptidase P In Complex
With Substrate
Length = 440
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 469 SHSVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----TEFD 524
S++ IVG+G N C + TEN + + + E+ + D F + T+
Sbjct: 228 SYNTIVGSGENGCILAYTENEXEMRD-GDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQ 286
Query: 525 RTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 565
R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 287 REIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 256 KHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLL----T 311
++ IVG+G N C + TEN + + + E+ + D F + T
Sbjct: 225 RYPSYNTIVGSGENGCILAYTENEXEMRD-GDLVLIDAGCEYKGYAGDITRTFPVNGKFT 283
Query: 312 EFDRTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 355
+ R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 284 QAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 284 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGM------- 336
+E N P++V +GAF DG + + D D+ L ++I E+++ +
Sbjct: 69 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRG 126
Query: 337 --YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 369
Y+ E ++M IL N +G +L G+
Sbjct: 127 LAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGV 161
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 494 NEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGM------- 546
+E N P++V +GAF DG + + D D+ L ++I E+++ +
Sbjct: 69 HECNSPYIV--GFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRG 126
Query: 547 --YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGI 579
Y+ E ++M IL N +G +L G+
Sbjct: 127 LAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGV 161
>pdb|3SPA|A Chain A, Crystal Structure Of Human Mitochondrial Rna Polymerase
Length = 1134
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 757 RVLTPEEYEDIVL-LAKLDKVKEILDIVLHQHSDLLRPNIQTFAAVLECLGRKEVKPRYT 815
++LT + Y ++L A+ KE++ ++ L P++ ++AA L+C+GR+
Sbjct: 161 KLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMGRQ------- 213
Query: 816 EQIAGVIEQ 824
+Q AG IE+
Sbjct: 214 DQDAGTIER 222
>pdb|3R7K|A Chain A, Crystal Structure Of A Probable Acyl Coa Dehydrogenase
From Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R7K|B Chain B, Crystal Structure Of A Probable Acyl Coa Dehydrogenase
From Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R7K|C Chain C, Crystal Structure Of A Probable Acyl Coa Dehydrogenase
From Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R7K|D Chain D, Crystal Structure Of A Probable Acyl Coa Dehydrogenase
From Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 403
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Query: 302 DDGALDFLLT-EFDRTIDDRSLNR------GQQIYEKMVSGMYMGEIVRLMMEKFTEEGI 354
+DGA F++ E T + R+L++ ++I K+ ++GEI R + E G+
Sbjct: 15 EDGAARFVVAPEAWTTPERRALSQMARSFVEREIAPKLAEWEHVGEIPRDLHLNAAEVGL 74
Query: 355 LFNGKGSHQLSTRG-IFDTMYISTIEAADVGDISICRNVLYQRLALPH--ATAQDCIDVR 411
L G + G D+ ++ A G +C + +ALPH A D + R
Sbjct: 75 LGIGFPEEVGGSGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIAANGSDALIER 134
Query: 412 YL 413
Y+
Sbjct: 135 YV 136
>pdb|2BWU|A Chain A, Asp271ala Escherichia Coli Aminopeptidase P
Length = 440
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 469 SHSVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGAL------DFLLTE 522
S++ IVG+G N C + TEN + V+I+ G GA+ + T+
Sbjct: 228 SYNTIVGSGENGCILHYTENECEMR---DGDLVLIDAGCEYKGYAGAITRTFPVNGKFTQ 284
Query: 523 FDRTIDD---RSLNRGQQIYEKMVSGMYM-GEIVRLMMEKFTEEGIL 565
R I D SL ++Y S + + GE+VR+M+ + GIL
Sbjct: 285 AQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGIL 331
>pdb|1HKG|A Chain A, Structural Dynamics Of Yeast Hexokinase During Catalysis
Length = 457
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 238 VAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACY 272
VA + D+ G L Y K+G+I G+G NA Y
Sbjct: 183 VADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAY 217
>pdb|2YHX|A Chain A, Sequencing A Protein By X-Ray Crystallography. Ii.
Refinement Of Yeast Hexokinase B Co-Ordinates And
Sequence At 2.1 Angstroms Resolution
Length = 457
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 238 VAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACY 272
VA + D+ G L Y K+G+I G+G NA Y
Sbjct: 183 VADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAY 217
>pdb|1W52|X Chain X, Crystal Structure Of A Proteolyzed Form Of Pancreatic
Lipase Related Protein 2 From Horse
Length = 452
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Query: 198 SKCVLVRWTKGFKCE--------GVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLV 249
+ C+ V W+ G K E +VGA L+QQ L S P NV I +
Sbjct: 101 TNCISVDWSSGAKAEYTQAVQNIRIVGAETAYLIQQLLTELSYNPENVHIIGHSLGAHTA 160
Query: 250 SCAYDHKHCKIGVIVG-TGFNACYVERTENVSTFENEANKPFV-VINTE 296
A ++G + G C+ + +E V ++A FV VI+T+
Sbjct: 161 GEAGRRLEGRVGRVTGLDPAEPCFQDASEEVRLDPSDAQ--FVDVIHTD 207
>pdb|4EEI|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From
Francisella Tularensis Complexed With Amp And Succinate
pdb|4EEI|B Chain B, Crystal Structure Of Adenylosuccinate Lyase From
Francisella Tularensis Complexed With Amp And Succinate
Length = 438
Score = 29.3 bits (64), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Query: 64 MEHKTYPISPEIMTGPGEQLFDYIAESLENFV-------REQKAENEHLPLGF 109
M HK PIS E +TG L +++ +LEN V AE +LP F
Sbjct: 265 MPHKKNPISTENLTGMARMLRSHVSIALENCVLWHERDISHSSAERFYLPDNF 317
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,323,258
Number of Sequences: 62578
Number of extensions: 962537
Number of successful extensions: 2643
Number of sequences better than 100.0: 51
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 2365
Number of HSP's gapped (non-prelim): 154
length of query: 828
length of database: 14,973,337
effective HSP length: 107
effective length of query: 721
effective length of database: 8,277,491
effective search space: 5968071011
effective search space used: 5968071011
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)