Query psy4666
Match_columns 828
No_of_seqs 375 out of 1354
Neff 4.7
Searched_HMMs 29240
Date Fri Aug 16 22:41:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4666.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4666hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f9m_A Glucokinase; hexokinase 100.0 2E-109 6E-114 930.2 35.2 404 2-487 40-461 (470)
2 3hm8_A Hexokinase-3; glucose, 100.0 1E-105 5E-110 893.4 34.1 400 2-487 25-437 (445)
3 1cza_N Hexokinase type I; stru 100.0 4E-104 1E-108 949.3 42.8 552 2-636 41-841 (917)
4 3o8m_A Hexokinase; rnaseh-like 100.0 1E-100 4E-105 862.8 40.0 403 2-487 46-470 (485)
5 1bdg_A Hexokinase; phosphotran 100.0 1E-94 3.4E-99 810.0 35.9 407 2-487 31-447 (451)
6 1cza_N Hexokinase type I; stru 100.0 7.2E-91 2.5E-95 834.9 34.5 404 2-487 489-908 (917)
7 2yhx_A Hexokinase B; transfera 100.0 2.9E-88 1E-92 758.9 38.3 397 2-487 28-443 (457)
8 3f9m_A Glucokinase; hexokinase 100.0 8.7E-41 3E-45 375.1 8.9 164 472-638 229-396 (470)
9 3hm8_A Hexokinase-3; glucose, 100.0 2.7E-40 9.2E-45 368.8 7.6 166 471-639 204-373 (445)
10 3o8m_A Hexokinase; rnaseh-like 100.0 5.7E-38 1.9E-42 353.9 10.0 166 472-638 229-404 (485)
11 2yhx_A Hexokinase B; transfera 100.0 3.7E-32 1.3E-36 305.1 11.3 166 472-640 207-380 (457)
12 1bdg_A Hexokinase; phosphotran 100.0 3.9E-31 1.3E-35 296.3 9.5 164 472-636 216-385 (451)
13 2qm1_A Glucokinase; alpha-beta 99.9 1.1E-24 3.8E-29 229.6 24.3 275 39-468 6-291 (326)
14 3vgl_A Glucokinase; ROK family 99.9 8.8E-25 3E-29 232.5 21.3 270 39-468 2-281 (321)
15 1z05_A Transcriptional regulat 99.9 1.3E-23 4.6E-28 231.9 24.7 269 38-467 107-385 (429)
16 4db3_A Glcnac kinase, N-acetyl 99.9 4.4E-23 1.5E-27 220.4 25.9 253 40-468 25-297 (327)
17 1z6r_A MLC protein; transcript 99.9 2.3E-23 7.8E-28 227.8 23.5 268 38-467 84-362 (406)
18 2hoe_A N-acetylglucosamine kin 99.9 5.9E-23 2E-27 223.4 21.0 251 38-468 86-343 (380)
19 3mcp_A Glucokinase; structural 99.9 8.5E-23 2.9E-27 223.4 19.4 251 38-468 8-287 (366)
20 3vov_A Glucokinase, hexokinase 99.9 2.7E-22 9.2E-27 212.2 22.4 254 40-468 2-267 (302)
21 2yhw_A Bifunctional UDP-N-acet 99.9 6E-22 2.1E-26 211.7 23.9 269 39-468 30-310 (343)
22 3r8e_A Hypothetical sugar kina 99.9 4.8E-22 1.6E-26 211.4 19.6 264 37-468 17-289 (321)
23 2ap1_A Putative regulator prot 99.9 9.7E-22 3.3E-26 208.5 21.4 252 40-468 25-297 (327)
24 4htl_A Beta-glucoside kinase; 99.9 2.3E-21 7.9E-26 204.3 22.0 252 40-468 5-265 (297)
25 2aa4_A Mannac kinase, putative 99.9 1E-21 3.4E-26 204.4 15.6 250 40-468 2-261 (289)
26 3htv_A D-allose kinase, alloki 99.9 6E-22 2E-26 210.7 12.8 255 37-468 5-268 (310)
27 2gup_A ROK family protein; sug 99.8 4.3E-20 1.5E-24 192.6 19.7 168 217-468 85-255 (292)
28 1sz2_A Glucokinase, glucose ki 99.8 2.8E-20 9.6E-25 198.7 18.0 171 220-466 94-294 (332)
29 3epq_A Putative fructokinase; 99.8 6.9E-20 2.4E-24 194.5 19.5 166 199-468 78-252 (302)
30 2q2r_A Glucokinase 1, putative 99.7 2.6E-18 9E-23 186.2 12.2 181 218-467 118-334 (373)
31 1woq_A Inorganic polyphosphate 99.7 4.1E-16 1.4E-20 161.5 19.9 218 35-461 8-236 (267)
32 2ch5_A NAGK protein; transfera 99.7 8.4E-16 2.9E-20 163.5 22.1 267 40-468 7-294 (347)
33 3lm2_A Putative kinase; struct 99.7 7E-17 2.4E-21 166.3 12.3 116 238-467 95-210 (226)
34 1saz_A Probable butyrate kinas 99.7 1.9E-17 6.4E-22 181.3 6.2 281 40-469 3-325 (381)
35 2e2o_A Hexokinase; acetate and 99.7 4.3E-16 1.5E-20 163.0 15.0 258 40-467 3-266 (299)
36 1zc6_A Probable N-acetylglucos 99.6 1.6E-14 5.3E-19 152.2 14.1 257 40-463 12-275 (305)
37 1zxo_A Conserved hypothetical 99.5 3.9E-15 1.3E-19 156.2 5.0 182 218-474 75-262 (291)
38 1zbs_A Hypothetical protein PG 99.5 6.1E-13 2.1E-17 139.6 20.3 55 408-469 206-261 (291)
39 3spa_A Mtrpol, DNA-directed RN 96.6 0.0011 3.6E-08 81.3 4.7 55 711-769 334-388 (1134)
40 3ifr_A Carbohydrate kinase, FG 96.3 0.0069 2.3E-07 68.6 8.5 78 37-115 5-86 (508)
41 2p3r_A Glycerol kinase; glycer 96.2 0.0099 3.4E-07 67.4 8.8 77 37-114 1-81 (510)
42 3djc_A Type III pantothenate k 95.9 0.069 2.4E-06 56.2 13.3 65 40-115 3-67 (266)
43 2dpn_A Glycerol kinase; thermu 95.9 0.015 5.1E-07 65.5 8.6 74 40-114 3-80 (495)
44 3h3n_X Glycerol kinase; ATP-bi 95.9 0.017 5.8E-07 65.3 9.1 75 39-114 5-83 (506)
45 4e1j_A Glycerol kinase; struct 95.9 0.016 5.3E-07 66.0 8.5 74 40-114 27-104 (520)
46 2w40_A Glycerol kinase, putati 95.7 0.022 7.5E-07 64.2 9.0 72 40-114 5-84 (503)
47 3g25_A Glycerol kinase; IDP007 95.6 0.022 7.4E-07 64.3 8.5 74 40-114 7-84 (501)
48 3ezw_A Glycerol kinase; glycer 95.6 0.023 7.9E-07 64.5 8.6 76 36-112 1-80 (526)
49 2zf5_O Glycerol kinase; hypert 95.5 0.025 8.7E-07 63.6 8.6 74 40-114 4-81 (497)
50 3l0q_A Xylulose kinase; xlylul 95.5 0.022 7.6E-07 65.1 8.1 74 39-113 5-82 (554)
51 2d4w_A Glycerol kinase; alpha 95.4 0.028 9.5E-07 63.5 8.5 72 40-114 3-80 (504)
52 4ehu_A Activator of 2-hydroxyi 95.3 0.57 1.9E-05 48.0 17.2 35 239-273 75-109 (276)
53 3bex_A Type III pantothenate k 95.3 0.094 3.2E-06 54.5 11.2 46 40-90 4-49 (249)
54 3hz6_A Xylulokinase; xylulose, 95.2 0.038 1.3E-06 62.7 8.5 72 40-113 6-81 (511)
55 2itm_A Xylulose kinase, xylulo 95.1 0.046 1.6E-06 61.3 8.9 72 41-115 2-77 (484)
56 3ll3_A Gluconate kinase; xylul 94.7 0.053 1.8E-06 61.3 8.1 70 40-113 5-78 (504)
57 3jvp_A Ribulokinase; PSI-II, N 94.2 0.083 2.8E-06 60.7 8.4 73 40-113 6-94 (572)
58 2h3g_X Biosynthetic protein; p 93.6 0.96 3.3E-05 47.5 14.3 51 41-100 2-52 (268)
59 3h6e_A Carbohydrate kinase, FG 92.5 0.17 5.7E-06 57.3 7.0 68 40-114 7-77 (482)
60 2uyt_A Rhamnulokinase; rhamnos 91.7 0.41 1.4E-05 53.5 8.9 56 40-96 5-69 (489)
61 3i8b_A Xylulose kinase; strain 85.7 1.7 5.8E-05 49.4 8.5 66 40-114 6-73 (515)
62 4ijn_A Acetate kinase, acetoki 85.3 0.85 2.9E-05 50.8 5.6 53 412-466 297-350 (398)
63 3h1q_A Ethanolamine utilizatio 82.5 20 0.00067 36.1 14.0 23 39-61 28-51 (272)
64 4bc3_A Xylulose kinase; transf 80.5 2.2 7.5E-05 48.6 6.7 38 234-273 273-310 (538)
65 4b9q_A Chaperone protein DNAK; 78.6 0.92 3.2E-05 52.5 2.9 54 219-275 150-206 (605)
66 4gni_A Putative heat shock pro 76.8 4.1 0.00014 43.9 7.2 52 219-273 165-221 (409)
67 2ych_A Competence protein PILM 76.4 7.2 0.00025 41.4 8.9 63 40-103 14-77 (377)
68 1hux_A Activator of (R)-2-hydr 75.4 5.8 0.0002 41.1 7.6 67 408-485 186-255 (270)
69 3qfu_A 78 kDa glucose-regulate 72.3 1.6 5.5E-05 46.5 2.5 49 219-270 168-219 (394)
70 3i33_A Heat shock-related 70 k 69.8 1.4 4.9E-05 47.3 1.5 53 219-274 173-231 (404)
71 1yuw_A Heat shock cognate 71 k 67.4 1.8 6.1E-05 49.5 1.7 32 220-254 155-186 (554)
72 2kho_A Heat shock protein 70; 56.2 3.2 0.00011 48.0 1.1 48 220-270 151-201 (605)
73 3d2f_A Heat shock protein homo 53.9 7 0.00024 46.0 3.4 31 220-253 154-184 (675)
74 2f9w_A Pantothenate kinase; CO 46.9 2.2E+02 0.0074 29.8 13.1 30 40-73 24-54 (271)
75 2v7y_A Chaperone protein DNAK; 45.7 38 0.0013 38.0 7.7 45 220-267 125-169 (509)
76 2fxu_A Alpha-actin-1, actin, a 41.3 1.8E+02 0.006 31.0 11.7 44 441-487 297-350 (375)
77 4a2a_A Cell division protein F 35.1 4.8E+02 0.016 28.5 14.5 51 217-270 167-219 (419)
78 3r9p_A ACKA; ssgcid, seattle s 33.0 27 0.00093 38.8 3.7 45 416-465 296-340 (391)
79 1hjr_A Holliday junction resol 32.3 92 0.0031 30.2 7.0 57 40-100 2-60 (158)
80 3t69_A Putative 2-dehydro-3-de 31.6 36 0.0012 37.0 4.4 52 40-95 8-60 (330)
81 3cet_A Conserved archaeal prot 30.5 30 0.001 37.6 3.5 60 387-448 226-285 (334)
82 3nuw_A 2-OXO-3-deoxygalactonat 29.9 56 0.0019 34.9 5.4 51 40-94 7-57 (295)
83 3zyy_X Iron-sulfur cluster bin 26.1 90 0.0031 36.7 6.7 64 240-307 353-420 (631)
84 2ews_A Pantothenate kinase; PA 25.3 41 0.0014 35.7 3.3 53 409-467 212-264 (287)
85 3s5p_A Ribose 5-phosphate isom 21.5 97 0.0033 30.6 4.9 55 431-485 41-97 (166)
No 1
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=100.00 E-value=1.8e-109 Score=930.19 Aligned_cols=404 Identities=45% Similarity=0.841 Sum_probs=385.7
Q ss_pred chHHHHHHhhcccCCCCCCCccccccccccCCCCcccccEEEEEeCCceEEEEEEE-eCc-----eeEEEEEEEecCCCc
Q psy4666 2 SRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIY-AGE-----KFRMEHKTYPISPEI 75 (828)
Q Consensus 2 ~~f~~em~~GL~~~~~~~s~~~MlPT~v~~lP~G~E~G~fLalDLGGTn~Rv~lV~-~G~-----~~~~~~~~~~Ip~e~ 75 (828)
++|.+||++||+++++++|+++||||||+++|+|+|+|.|||||||||||||++|+ .|. .+++.+++|+||+++
T Consensus 40 ~~f~~em~~GL~~~~~~~s~~~MlPTyV~~lP~G~E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~Ip~~l 119 (470)
T 3f9m_A 40 RRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDA 119 (470)
T ss_dssp HHHHHHHHHHHSTTTTTTCSSCCEEEEEESSCCCCCCEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCHHH
T ss_pred HHHHHHHHHHhcccCCCCCCcccccCccccCCCCCcceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecCChHh
Confidence 68999999999999888999999999999999999999999999999999999999 553 578889999999999
Q ss_pred ccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEeccccccccchhhhhhhhccccccccccccCCCcccccCCeEEE
Q psy4666 76 MTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLV 155 (828)
Q Consensus 76 ~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFPv~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~ 155 (828)
|.|++++||||||+||++|+++++...+.+||||||||||+|+++++ |+|
T Consensus 120 ~~gt~~eLFd~IA~~i~~fl~~~~~~~~~lpLGfTFSFP~~Q~sl~~-----------------------------g~L- 169 (470)
T 3f9m_A 120 MTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDK-----------------------------GIL- 169 (470)
T ss_dssp HSSBHHHHHHHHHHHHHHHHHHTTCSSSCCEEEEEECSCEEEEETTE-----------------------------EEE-
T ss_pred ccCCHHHHHHHHHHHHHHHHhhccccccccceEEEEeccccccCCCc-----------------------------eEE-
Confidence 99999999999999999999999887788999999999999999999 999
Q ss_pred eccccceecccccchHHHHHHHHHHHhhcccccccccCccccccceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCc
Q psy4666 156 RWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPV 235 (828)
Q Consensus 156 ~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V 235 (828)
++|||||+++|++|+||+++|++|++|+|++++
T Consensus 170 -----------------------------------------------i~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v 202 (470)
T 3f9m_A 170 -----------------------------------------------LNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEM 202 (470)
T ss_dssp -----------------------------------------------CCCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCC
T ss_pred -----------------------------------------------EeccccccCCCcCCccHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999999999988899
Q ss_pred cEEEEEechHHHHHhcccCCCCcEEEEEEcccccceeeccccccccCCCCCCCCcEEEecCCCccCCCCcccccccchhh
Q psy4666 236 NVVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDR 315 (828)
Q Consensus 236 ~vvAVvNDTVaTLLaeay~~~~~~IGLILGTGtNacYiE~~~~i~kl~gage~G~MiINtEwG~FG~~G~l~~~~T~fD~ 315 (828)
+|+||+||||||||+++|.+++|.||+|+|||||+||+|+.++|+++++ ..++|+||||||+||++|+|++|+|+||+
T Consensus 203 ~v~AlvNDTVgTL~s~aY~~~~~~iGlI~GTGtNa~Y~E~~~~I~k~~~--~~~~miINtEwG~Fg~~~~l~~~~T~~D~ 280 (470)
T 3f9m_A 203 DVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEG--DEGRMCVNTEWGAFGDSGELDEFLLEYDR 280 (470)
T ss_dssp EEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSSC--CSSEEEEECCGGGTTTTSTTGGGCCHHHH
T ss_pred cEEEEEEcCHHHHHhcccCCCCceEEEEEecCCceEEeeeccccccccC--CCCcEEEeechhhcCCCcccCCCCCcccH
Confidence 9999999999999999999999999999999999999999999999987 78899999999999999999999999999
Q ss_pred hhcccCCCcchhHHHHhhccccHHHHHHHHHHHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHH
Q psy4666 316 TIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQ 395 (828)
Q Consensus 316 ~iD~~S~npg~q~fEKmvSG~YLGELvRliLl~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~ 395 (828)
.+|+.|.|||+|+||||+||+|||||+|++|+++++++.+|++..++.|.++|+|+|++|++|++|++++ ..++.++ +
T Consensus 281 ~lD~~S~nPG~Q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~~L~~~~~l~T~~ls~ie~d~~~~-~~~~~il-~ 358 (470)
T 3f9m_A 281 LVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDR-KQIYNIL-S 358 (470)
T ss_dssp HHHHHSSSTTSCHHHHTTCHHHHHHHHHHHHHHHHHTTCSGGGCCCTTTTSTTCSCHHHHHHHHTCCSSC-HHHHHHH-H
T ss_pred HHhhcCCCCCceeeccccchhhHHHHHHHHHHHHHHhCcCcCCCCcHHhcCCCCcCchHHhhhccCCCch-HHHHHHH-H
Confidence 9999999999999999999999999999999999999999999999999999999999999999998888 8899999 6
Q ss_pred hhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC------eEEEEEcCceeecchhHHHHHHHHHHhhcc
Q psy4666 396 RLALPHATAQDCIDVRYLCRVVSQRSAHLASAGIATLLNRMDFS------IVTVGVDGSVYRYHPYFHHMMLEKIPALIS 469 (828)
Q Consensus 396 ~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLAAIl~~l~~~------~ItVGvDGSVy~~~p~f~~~L~e~lreL~p 469 (828)
.||++ ++.+|+..+++||.+|++|||+|+||+|+||+++++.+ +++||||||||++||.|++++++++++++|
T Consensus 359 ~l~~~-~~~~d~~~vr~i~~~V~~RaA~L~Aa~iaail~k~~~~~~~~~~~~~VgvDGsv~~~yp~f~~~~~~~l~~l~~ 437 (470)
T 3f9m_A 359 TLGLR-PSTTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTP 437 (470)
T ss_dssp HTTCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCT
T ss_pred hcCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccceEEEEeccHHHhCchHHHHHHHHHHHHcC
Confidence 69997 67799999999999999999999999999999988643 399999999999999999999999999999
Q ss_pred cceee------ecccchhhhhccc
Q psy4666 470 HSVIV------GTGFNACYVERTE 487 (828)
Q Consensus 470 ~~~i~------GtG~nAAyv~~~~ 487 (828)
++.|. |||.|||+++++.
T Consensus 438 ~~~v~l~~a~DGSg~GAAliAa~a 461 (470)
T 3f9m_A 438 SCEITFIESEEGSGRGAALVSAVA 461 (470)
T ss_dssp TEEEEEEECSSHHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCcHHHHHHHHHHH
Confidence 76664 9999999999874
No 2
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-105 Score=893.37 Aligned_cols=400 Identities=42% Similarity=0.790 Sum_probs=380.1
Q ss_pred chHHHHHHhhcccCCCCCCCccccccccccCCCCcccccEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCc
Q psy4666 2 SRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPG 80 (828)
Q Consensus 2 ~~f~~em~~GL~~~~~~~s~~~MlPT~v~~lP~G~E~G~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~ 80 (828)
++|..||++||+++ +|+++||||||+++|+|+|+|+|||||||||||||++|+ .|. +++.+++|+||+++|.|++
T Consensus 25 ~~f~~em~~GL~~~---~s~~~MlPtyv~~~P~G~E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~~~~~ip~~~~~g~~ 100 (445)
T 3hm8_A 25 AQMRKAMAKGLRGE---ASSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVTTG-VQITSEIYSIPETVAQGSG 100 (445)
T ss_dssp HHHHHHHHHHHHTS---CCSSCCEECCCCSSCCSCCCEEEEEEEESSSSEEEEEEEESSS-EEEEEEEECCCHHHHTSBH
T ss_pred HHHHHHHHHHhccC---CCCCccCCCCCCCCCCCceeeEEEEEEecCCeEEEEEEEECCc-eEEEEEEeccCccccCCCH
Confidence 68999999999976 389999999999999999999999999999999999999 665 7888999999999999999
Q ss_pred cchHHHHHHHHHHHHhhccCCCCccceEEEEeccccccccchhhhhhhhccccccccccccCCCcccccCCeEEEecccc
Q psy4666 81 EQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKG 160 (828)
Q Consensus 81 ~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFPv~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kG 160 (828)
++||||||+||++|+++++...+.+|+||||||||+|+++++ |+|
T Consensus 101 ~~LFd~Ia~~i~~fl~~~~~~~~~lplGftFSFP~~Q~sl~~-----------------------------g~L------ 145 (445)
T 3hm8_A 101 QQLFDHIVDCIVDFQQKQGLSGQSLPLGFTFSFPCRQLGLDQ-----------------------------GIL------ 145 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCCCEEEEECSCEECSSTTC-----------------------------CEE------
T ss_pred HHHHHHHHHHHHHHHHHhCcccccCcceEEEeeeeEeccCCc-----------------------------eEE------
Confidence 999999999999999999887888999999999999999999 999
Q ss_pred ceecccccchHHHHHHHHHHHhhcccccccccCccccccceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEE
Q psy4666 161 FKCEGVVGANVVELLQQALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAI 240 (828)
Q Consensus 161 f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAV 240 (828)
++|||||++++++|+||+++|++|++|+++++++|+||
T Consensus 146 ------------------------------------------i~wtKGF~~~~~~G~dv~~lL~~al~r~~~~~v~vvAi 183 (445)
T 3hm8_A 146 ------------------------------------------LNWTKGFKASDCEGQDVVSLLREAITRRQAVELNVVAI 183 (445)
T ss_dssp ------------------------------------------CCCCTTCCCBTCTTSBHHHHHHHHHHHTTCSCCCSEEE
T ss_pred ------------------------------------------EEeeccccCCCCCCCcHHHHHHHHHHhcCCCCcceEEE
Confidence 99999999999999999999999999997799999999
Q ss_pred EechHHHHHhcccCCCCcEEEEEEcccccceeeccccccccCCCCCCCCcEEEecCCCccCCCCcccccccchhhhhccc
Q psy4666 241 LNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDR 320 (828)
Q Consensus 241 vNDTVaTLLaeay~~~~~~IGLILGTGtNacYiE~~~~i~kl~gage~G~MiINtEwG~FG~~G~l~~~~T~fD~~iD~~ 320 (828)
+||||||||+++|.+++|.||+|+|||||+||+|+.++|+++++ +.++|+||||||+||++|++++|+|+||+.+|+.
T Consensus 184 vNDTvgTLla~~y~~~~~~iglIlGTGtNa~y~e~~~~i~k~~~--~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~ 261 (445)
T 3hm8_A 184 VNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPG--DSGRMCINMEWGAFGDDGSLAMLSTRFDASVDQA 261 (445)
T ss_dssp ECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSCC--CSSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHT
T ss_pred ecCcHHHHHhhccCCCCceEEEEEeCCceEEEEEecccccccCC--CCCcEEEEcchhhcCCCCCCcCCCCccchHHhcC
Confidence 99999999999999999999999999999999999999999987 6789999999999999999999999999999999
Q ss_pred CCCcchhHHHHhhccccHHHHHHHHHHHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCC
Q psy4666 321 SLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALP 400 (828)
Q Consensus 321 S~npg~q~fEKmvSG~YLGELvRliLl~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~ 400 (828)
|.|||+|+||||+||+|||||+|++|+++++++.||+|..|+.|.++++|+|++||+|++|+ .++..++.+| +.||+
T Consensus 262 S~~PG~q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~~L~~~~~l~T~~ls~ie~D~-~~~~~~~~~l-~~l~~- 338 (445)
T 3hm8_A 262 SINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQQIQRLQTRDIFKTKFLSEIESDS-LALRQVRAIL-EDLGL- 338 (445)
T ss_dssp SSSTTSSTTGGGTSHHHHHHHHHHHHHHHHHHTSSGGGCCCGGGGSTTCSCHHHHHHHTCTT-CCHHHHHHHH-HTTTC-
T ss_pred CCCCCceEeeeecchhhHHHHHHHHHHHHHHcCCCCCCCCcHHHcCCCCCCcHHHHHHhcCC-chHHHHHHHH-HHhCC-
Confidence 99999999999999999999999999999999999999999999999999999999999874 4677889999 66999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC------CeEEEEEcCceeecchhHHHHHHHHHHhhcccceee
Q psy4666 401 HATAQDCIDVRYLCRVVSQRSAHLASAGIATLLNRMDF------SIVTVGVDGSVYRYHPYFHHMMLEKIPALISHSVIV 474 (828)
Q Consensus 401 ~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLAAIl~~l~~------~~ItVGvDGSVy~~~p~f~~~L~e~lreL~p~~~i~ 474 (828)
.++.+|+..+++||.+|++|||+|+||+||||+++++. .+++||||||||++||.|+++++++++++.|++.|.
T Consensus 339 ~~t~~d~~~vr~i~~~V~~RaA~L~Aa~iaai~~k~~~~~~~~~~~~~VgvDGsvy~~~P~f~~~l~~~l~~l~~~~~v~ 418 (445)
T 3hm8_A 339 PLTSDDALMVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRGLEELAVSVGVDGTLYKLHPRFSSLVAATVRELAPRCVVT 418 (445)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCTTEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCcEEEEeceehccChhHHHHHHHHHHHhCCCCcEE
Confidence 59999999999999999999999999999999999853 369999999999999999999999999999976664
Q ss_pred ------ecccchhhhhccc
Q psy4666 475 ------GTGFNACYVERTE 487 (828)
Q Consensus 475 ------GtG~nAAyv~~~~ 487 (828)
|||.|||+++++.
T Consensus 419 ~~~s~DGSg~GAAl~AA~a 437 (445)
T 3hm8_A 419 FLQSEDGSGKGAALVTAVA 437 (445)
T ss_dssp EEECSSCHHHHHHHHHHHH
T ss_pred EEECCCCchHHHHHHHHHH
Confidence 9999999999864
No 3
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=4.2e-104 Score=949.31 Aligned_cols=552 Identities=43% Similarity=0.778 Sum_probs=491.0
Q ss_pred chHHHHHHhhcccCCCCCCCccccccccccCCCCcccccEEEEEeCCceEEEEEEE-eCc---eeEEEEEEEecCCCccc
Q psy4666 2 SRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIY-AGE---KFRMEHKTYPISPEIMT 77 (828)
Q Consensus 2 ~~f~~em~~GL~~~~~~~s~~~MlPT~v~~lP~G~E~G~fLalDLGGTn~Rv~lV~-~G~---~~~~~~~~~~Ip~e~~~ 77 (828)
++|.+||++||+++++++|+++||||||+++|+|+|+|.||||||||||||+++|+ +|+ .+++.+++|++|++++.
T Consensus 41 ~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lv~~~G~~~~~i~~~~~~~~ip~~~~~ 120 (917)
T 1cza_N 41 TRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENIVH 120 (917)
T ss_dssp HHHHHHHHHHHCTTTGGGCSSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEECCCHHHHS
T ss_pred HHHHHHHHHHhccCCCCCCcccccccccCCCCCCCCcceEEEEEeCCCeEEEEEEEecCCCcceEEEEEEEEECCccccc
Confidence 68999999999988878899999999999999999999999999999999999999 664 25577889999998888
Q ss_pred CCccchHHHHHHHHHHHHhhccCCCCccceEEEEeccccccccchhhhhhhhccccccccccccCCCcccccCCeEEEec
Q psy4666 78 GPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRW 157 (828)
Q Consensus 78 g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFPv~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~ 157 (828)
+++++||++||++|.+|+++++...+.+++|||||||++|+++++ |+|
T Consensus 121 ~~~~~lf~~Ia~~i~~~l~~~~~~~~~~~lGi~fs~P~~q~~~~~-----------------------------G~l--- 168 (917)
T 1cza_N 121 GSGSQLFDHVAECLGDFMEKRKIKDKKLPVGFTFSFPCQQSKIDE-----------------------------AIL--- 168 (917)
T ss_dssp SBHHHHHHHHHHHHHHHHHHHTCTTSCCCEEEEECSCEECSSTTC-----------------------------CEE---
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcccEEEEEccccccCcCCc-----------------------------eEE---
Confidence 889999999999999999988765566799999999999999999 999
Q ss_pred cccceecccccchHHHHHHHHHHHhhcccccccccCccccccceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCccE
Q psy4666 158 TKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNV 237 (828)
Q Consensus 158 ~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~v 237 (828)
++|||+|++++++|+||+++|+++++|+|++|+++
T Consensus 169 ---------------------------------------------~~wtkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~ 203 (917)
T 1cza_N 169 ---------------------------------------------ITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANI 203 (917)
T ss_dssp ---------------------------------------------CCCCTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCE
T ss_pred ---------------------------------------------EecccCCCCCcccCCchHHHHHHHHhhcCCCCceE
Confidence 88999999999999999999999999998789999
Q ss_pred EEEEechHHHHHhcccCCCCcEEEEEEcccccceeeccccccccCCCCCCCCcEEEecCCCccCCCCcccccccchhhhh
Q psy4666 238 VAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTI 317 (828)
Q Consensus 238 vAVvNDTVaTLLaeay~~~~~~IGLILGTGtNacYiE~~~~i~kl~gage~G~MiINtEwG~FG~~G~l~~~~T~fD~~i 317 (828)
|+|+||||||+||++|.++++.||+|+|||+|+||++++++|+++.| ..|||+||+|||.|++++.|++|+|+||..+
T Consensus 204 val~NDa~~tll~e~~~~~~~~iglilGTGvngg~i~~g~~i~~~~G--~~g~~~in~E~G~f~~~~~l~~~~t~~D~~~ 281 (917)
T 1cza_N 204 VAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEG--DEGRMCINTEWGAFGDDGSLEDIRTEFDRAI 281 (917)
T ss_dssp EEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCTTSSC--CSSEEEEECCGGGTTTTTTTTTTCCHHHHHH
T ss_pred EEEEEhhHHHHHHhhccCCCcEEEEEEECCcceEEEecCcccccccC--CCCceEEeccccccCCccccccCCCcccccc
Confidence 99999999999999999999999999999999999999999999887 5789999999999999999989999999999
Q ss_pred cccCCCcchhHHHHhhccccHHHHHHHHHHHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhh
Q psy4666 318 DDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRL 397 (828)
Q Consensus 318 D~~S~npg~q~fEKmvSG~YLGELvRliLl~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~l 397 (828)
|..|.|||+||||||+||+||||++|+++.++.+++.+|.+..++.+.+++.|+++++++++ ++++++..++.++ +.+
T Consensus 282 dc~~g~pg~g~~Ek~~SG~yLgel~r~~l~~~~~~~~~~~~~~~~~l~~~~~l~t~~vs~~~-~~~~~~~~~~~i~-~~~ 359 (917)
T 1cza_N 282 DAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKFNTSDVSAIE-KNKEGLHNAKEIL-TRL 359 (917)
T ss_dssp HHTSSSTTSSTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTSSCHHHHHHHT-CTTTHHHHHHHHH-HHT
T ss_pred ccCCcCCCccHhHHHhhhhhHHHHHHHHHHHhhccccccccccchhhccccccChHHHHHHh-cccccHHHHHHHH-HHh
Confidence 99999999999999999999999999999999888888988778888889999999999999 5678888999999 678
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CC----CeEEEEEcCceeecchhHHHHHHHHHHhhcccc
Q psy4666 398 ALPHATAQDCIDVRYLCRVVSQRSAHLASAGIATLLNRM--DF----SIVTVGVDGSVYRYHPYFHHMMLEKIPALISHS 471 (828)
Q Consensus 398 gl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLAAIl~~l--~~----~~ItVGvDGSVy~~~p~f~~~L~e~lreL~p~~ 471 (828)
+++ ++..|++.++.+|.+|++|+|+++|++|++|++++ +| ...+|++|||||+++|.|.+++++++++++|..
T Consensus 360 ~~~-~~~~D~~~~~~~a~~v~~raa~llA~gia~ii~~l~~dp~~~~~~~~IvigGgV~~~~~~~~~~l~~~l~~~~~~~ 438 (917)
T 1cza_N 360 GVE-PSDDDCVSVQHVCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDS 438 (917)
T ss_dssp TCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEEECHHHHHCSSHHHHHHHHHHHHCTTE
T ss_pred CCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccCcceEEEECCchhhccHHHHHHHHHHHHHhcCCC
Confidence 886 89999999999999999999999999999999999 66 247888999999999999999999999988754
Q ss_pred e--ee----ecccchhhhhccc----------------------------------------------------------
Q psy4666 472 V--IV----GTGFNACYVERTE---------------------------------------------------------- 487 (828)
Q Consensus 472 ~--i~----GtG~nAAyv~~~~---------------------------------------------------------- 487 (828)
. |. |+|.|||+++++.
T Consensus 439 ~~~i~~a~dgs~~GAA~laa~~~~l~kq~~~i~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~~~~~mlpt~v~~ 518 (917)
T 1cza_N 439 DVRFLLSESGSGKGAAMVTAVAYRLAEQHRQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRR 518 (917)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSSCCEECSCCS
T ss_pred ceEEEEeccchHHHHHHHHHhHhhhhhcchhHHHHHhhhcCCHHHHHHHHHHHHHHHHHHhcccCCCCCCCceECCCCCC
Confidence 3 32 9999999998610
Q ss_pred --------------------------------------------------------------------------------
Q psy4666 488 -------------------------------------------------------------------------------- 487 (828)
Q Consensus 488 -------------------------------------------------------------------------------- 487 (828)
T Consensus 519 ~P~G~E~G~~lalDlGGTn~Rv~~V~l~~g~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~l~l 598 (917)
T 1cza_N 519 TPDGTENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKGPRMPL 598 (917)
T ss_dssp CCCSCCCEEEEEEEESSSSEEEEEEEEECSTTCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCCSSCCEE
T ss_pred CCCCCcceEEEEEEECCCcEEEEEEEeCCCcceeEEeeeeEEecCcccccCCHHHHHHHHHHHHHHHHHHcCCCccceeE
Confidence
Q ss_pred ----------------ccccc---------cc------------------------------------------------
Q psy4666 488 ----------------NVSTF---------EN------------------------------------------------ 494 (828)
Q Consensus 488 ----------------~I~k~---------~~------------------------------------------------ 494 (828)
++..| .+
T Consensus 599 G~tfsfPv~q~~i~~~~L~~WtKgf~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~~~~iglIl 678 (917)
T 1cza_N 599 GFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIV 678 (917)
T ss_dssp EEEECSCEEEEETTEEEECCCCTTCCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEE
T ss_pred EEEeeccccccccCccEECceecccccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCCCcEEEEEE
Confidence 00111 00
Q ss_pred ------------------cCCCCeEEEecCCCCCCCCCCccccccccchhhhhcCCCccchhhhhhhcccchHHHHHHHH
Q psy4666 495 ------------------EANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMM 556 (828)
Q Consensus 495 ------------------~~~~~~MiINtEWG~FGd~g~L~~~~T~fD~~lD~~S~nPG~Q~fEKMiSGmYLGELvRlIL 556 (828)
..+.++|+||||||+||+++++++|+|+||++||+.|.|||+|+||||+||||||||+|++|
T Consensus 679 GTG~na~y~e~~~~i~~~~g~~g~m~In~EwG~fg~~~~l~~~~T~~D~~~d~~s~~pG~q~~Ek~~SG~yLgel~R~il 758 (917)
T 1cza_N 679 GTGSNACYMEEMKNVEMVEGDQGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNIL 758 (917)
T ss_dssp SSSEEEEEEEETTTCTTSSCCSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTSTTTHHHHHHHHH
T ss_pred eCCeeEEEEEcCccccCcCCCcCcEEEecccccCCCcccccCCCCchhhhhhhcCCCCCCCchHHhhhHhHHHHHHHHHH
Confidence 00135799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccccCCCCCccccccCcccccccceecccCCCCCchhHHHHHhhcccc-chh---HHHHHHHHHHHHHhhhhcc
Q psy4666 557 EKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVVNDNSSQLIETQIRTLK-SSQ---FHLVQSKESNSAANKCNNE 632 (828)
Q Consensus 557 ldl~~~g~LF~g~~~~~L~~~~~f~T~~lS~Ie~~~~~~d~s~~ll~~~~~~i~-~t~---~k~v~~~Vs~RAA~l~aa~ 632 (828)
+++++++.+|.+..|+.|.+++.|+|++||.||+++........++ .+++... ..+ +++||.+|++|||+++|+|
T Consensus 759 ~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~ie~d~~~~~~~~~i~-~~~~~~~~~~D~~~~~~ia~~v~~RaA~l~a~~ 837 (917)
T 1cza_N 759 IDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQVRAIL-QQLGLNSTCDDSILVKTVCGVVSRRAAQLCGAG 837 (917)
T ss_dssp HHHHHTTSSGGGCCCTTTTSTTCSCHHHHHHHTCSSCCHHHHHHHH-HHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcccccccccccchhhccCCccchHHhhhhhcCcchhhHHHHHH-HHhCCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998543211112222 2333211 112 8899999999999999999
Q ss_pred cccc
Q psy4666 633 DESN 636 (828)
Q Consensus 633 ~~~~ 636 (828)
+.+-
T Consensus 838 iaai 841 (917)
T 1cza_N 838 MAAV 841 (917)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 4
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=100.00 E-value=1.3e-100 Score=862.82 Aligned_cols=403 Identities=34% Similarity=0.631 Sum_probs=379.5
Q ss_pred chHHHHHHhhcccCCCCCCCccccccccccCCCCcccccEEEEEeCCceEEEEEEE-eCc-eeEEEEEEEecCCCcccCC
Q psy4666 2 SRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIY-AGE-KFRMEHKTYPISPEIMTGP 79 (828)
Q Consensus 2 ~~f~~em~~GL~~~~~~~s~~~MlPT~v~~lP~G~E~G~fLalDLGGTn~Rv~lV~-~G~-~~~~~~~~~~Ip~e~~~g~ 79 (828)
++|.+||++||+++ +++++||||||+++|+|+|+|.|||||||||||||++|+ .|+ .+++.+++|+||++++.++
T Consensus 46 ~~f~~em~~GL~~~---~~~~~MlPt~V~~lP~G~E~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~Ip~~~~~~~ 122 (485)
T 3o8m_A 46 KHFISELDKGLSKK---GGNIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRLPDHLRTGT 122 (485)
T ss_dssp HHHHHHHHHHHSSS---CCSSCCEECCCCSCCCSCCEEEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEECCTTGGGSB
T ss_pred HHHHHHHHHHhccC---CCCCcccCCCCCCCCCCCcceEEEEEEecCCeEEEEEEEECCCCceEEEEEEEecCchhccCC
Confidence 68999999999876 478999999999999999999999999999999999999 664 5788899999999999999
Q ss_pred ccchHHHHHHHHHHHHhhccCC--CCccceEEEEeccccccccchhhhhhhhccccccccccccCCCcccccCCeEEEec
Q psy4666 80 GEQLFDYIAESLENFVREQKAE--NEHLPLGFTFSFPVDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRW 157 (828)
Q Consensus 80 ~~~lFd~IA~~i~~fl~e~~~~--~~~l~LGftFSFPv~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~ 157 (828)
+++||||||+||++|+++++.. .+.+|+|||||||++|+++++ |+|
T Consensus 123 ~~~lfd~Ia~~i~~fl~~~~~~~~~~~l~lGftfSfP~~q~~i~~-----------------------------g~l--- 170 (485)
T 3o8m_A 123 SEQLWSFIAKCLKEFVDEWYPDGVSEPLPLGFTFSYPASQKKINS-----------------------------GVL--- 170 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCSSCEEEEEEECSCEECSBTTC-----------------------------CEE---
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccceEEEEeeeEEEcccCC-----------------------------EEE---
Confidence 9999999999999999998754 456899999999999999999 999
Q ss_pred cccceecccccchHHHHHHHHHHHhhcccccccccCccccccceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCccE
Q psy4666 158 TKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNV 237 (828)
Q Consensus 158 ~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~v 237 (828)
++|||||++++++|+||+++|+++++|+| +||+|
T Consensus 171 ---------------------------------------------i~wtKGF~i~~~~G~dv~~~L~~al~r~g-l~v~v 204 (485)
T 3o8m_A 171 ---------------------------------------------QRWTKGFDIEGVEGHDVVPMLQEQIEKLN-IPINV 204 (485)
T ss_dssp ---------------------------------------------CCCCTTCCCBTCTTSBHHHHHHHHHHHTT-CCEEE
T ss_pred ---------------------------------------------eeccccccCCCcCCccHHHHHHHHHHhcC-CCceE
Confidence 99999999999999999999999999998 89999
Q ss_pred EEEEechHHHHHhcccCCCCcEEEEEEcccccceeeccccccccCCC-----CCCCCcEEEecCCCccCCCCcccccccc
Q psy4666 238 VAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFEN-----EANKPFVVINTEWGAFGDDGALDFLLTE 312 (828)
Q Consensus 238 vAVvNDTVaTLLaeay~~~~~~IGLILGTGtNacYiE~~~~i~kl~g-----age~G~MiINtEwG~FG~~G~l~~~~T~ 312 (828)
+||+||||||||+++|.+++|.||+|+|||+|+||+|+.++|+++++ .+..++|+||||||+||+ +++.+|+|+
T Consensus 205 ~aivNDtv~tll~~~y~~~~~~iglIlGTG~N~~y~e~~~~i~k~~~~~~~~~~~~~~miINtEwG~F~~-~~~~lp~T~ 283 (485)
T 3o8m_A 205 VALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEGLLPEDIGPDSPMAINCEYGSFDN-EHLVLPRTK 283 (485)
T ss_dssp EEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCGGGTTTCCTTSCTTCEEEEECCGGGTTT-TCSSSCCCH
T ss_pred EEEEEcHHHHHHHHhhCCCCcEEEEEEecCcceEEEeeccccccccccccccCCCCCcEEEEcccccCCC-CcccCCCCc
Confidence 99999999999999999999999999999999999999999999874 244678999999999965 466789999
Q ss_pred hhhhhcccCCCcchhHHHHhhccccHHHHHHHHHHHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHH
Q psy4666 313 FDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNV 392 (828)
Q Consensus 313 fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~i 392 (828)
||+.+|+.|.|||+|+||||+||+|||||+|++|+++++++.||++..++.|.++|+|+|++||+|++|+++++..++.+
T Consensus 284 ~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlil~~l~~~~~lF~~~~~~~L~~~~~l~T~~ls~i~~d~~~~l~~~~~~ 363 (485)
T 3o8m_A 284 YDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQDISKLKEAYVMDTSYPSKIEDDPFENLEDTDDL 363 (485)
T ss_dssp HHHHHHHHSSSTTSCHHHHHHSTTTHHHHHHHHHHHHHHTTSSSTTSCCGGGGSTTCSCTHHHHHHHHCCCTTCHHHHHH
T ss_pred hhhHHhhcCCCCCceeeccccccchHHHHHHHHHHHHHHcCcccCCCCcHHhcCCCCcCcHHHHHHHcCCcchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhcc---
Q psy4666 393 LYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASAGIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALIS--- 469 (828)
Q Consensus 393 l~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~p--- 469 (828)
|.+.||++ ++.+|+..+++||.+|++|||+|+|++||||+++++++.++||||||||++||.|+++++++++++++
T Consensus 364 l~~~l~~~-~t~~d~~~vr~i~~~V~~RAA~L~Aa~iaail~~~~~~~~~VgvdGSv~~~~P~f~~~~~~~l~~ll~~~~ 442 (485)
T 3o8m_A 364 FKTNLNIE-TTVVERKLIRKLAELVGTRAARLTVCGVSAICDKRGYKTAHIAADGSVFNRYPGYKEKAAQALKDIYNWDV 442 (485)
T ss_dssp HHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCC
T ss_pred HHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecChhccCccHHHHHHHHHHHHhcccc
Confidence 98889997 89999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred ----cceee------ecccchhhhhccc
Q psy4666 470 ----HSVIV------GTGFNACYVERTE 487 (828)
Q Consensus 470 ----~~~i~------GtG~nAAyv~~~~ 487 (828)
.+.|. |||.|||+++++.
T Consensus 443 ~~~~~~~v~l~~a~DGSg~GAAliAa~a 470 (485)
T 3o8m_A 443 EKMEDHPIQLVAAEDGSGVGAAIIACLT 470 (485)
T ss_dssp CSGGGCSEEEEECCCTTTHHHHHHHHHH
T ss_pred ccCCCceEEEEEcCCChHHHHHHHHHHH
Confidence 34443 9999999999864
No 5
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=100.00 E-value=1e-94 Score=810.02 Aligned_cols=407 Identities=44% Similarity=0.752 Sum_probs=384.1
Q ss_pred chHHHHHHhhcccCCCCCCCccccccccccCCCCcccccEEEEEeCCceEEEEEEE-eC-c-eeEEEEEEEecCCCcccC
Q psy4666 2 SRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIY-AG-E-KFRMEHKTYPISPEIMTG 78 (828)
Q Consensus 2 ~~f~~em~~GL~~~~~~~s~~~MlPT~v~~lP~G~E~G~fLalDLGGTn~Rv~lV~-~G-~-~~~~~~~~~~Ip~e~~~g 78 (828)
++|.+||++||+++++.+|+++||||||+++|+|+|+|.|||||||||||||++|+ +| + .+++.+++|+||++++.+
T Consensus 31 ~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~~~~~ip~~~~~~ 110 (451)
T 1bdg_A 31 DRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLSVTLEGKGKSPRIQERTYCIPAEKMSG 110 (451)
T ss_dssp HHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEEECC-CCCCEEEEEEECCCTTTTTS
T ss_pred HHHHHHHHHhhcccCCCCCcccccccccCCCCCCCccceEEEEEeCCCeEEEEEEecCCCCcceEEEEEEEecCCcccCC
Confidence 68999999999876666899999999999999999999999999999999999999 77 4 467778999999999999
Q ss_pred CccchHHHHHHHHHHHHhhccCCCCccceEEEEeccccccccchhhhhhhhccccccccccccCCCcccccCCeEEEecc
Q psy4666 79 PGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWT 158 (828)
Q Consensus 79 ~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFPv~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~ 158 (828)
++++||||||+||++|+++++...+.+|+||||||||+|+++++ |+|
T Consensus 111 ~~~~lfd~Ia~~i~~~l~~~~~~~~~~~lG~tfsfPv~q~~~~~-----------------------------G~l---- 157 (451)
T 1bdg_A 111 SGTELFKYIAETLADFLENNGMKDKKFDLGFTFSFPCVQKGLTH-----------------------------ATL---- 157 (451)
T ss_dssp BHHHHHHHHHHHHHHHHHHTTCCSSCEEEEEEECSCEEEETTTE-----------------------------EEE----
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCccccceEEEEeeEeccccCCC-----------------------------eEE----
Confidence 99999999999999999998876677999999999999999999 999
Q ss_pred ccceecccccchHHHHHHHHHHHhhcccccccccCccccccceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCccEE
Q psy4666 159 KGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVV 238 (828)
Q Consensus 159 kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vv 238 (828)
++|||||++++++|+||+++|+++++|++ +||+|+
T Consensus 158 --------------------------------------------~~wtKgf~~~~~~g~dv~~~L~~al~r~~-l~v~v~ 192 (451)
T 1bdg_A 158 --------------------------------------------VRWTKGFSADGVEGHNVAELLQTELDKRE-LNVKCV 192 (451)
T ss_dssp --------------------------------------------CCCCTTCCCBTCTTSBHHHHHHHHHHTTT-CCEEEE
T ss_pred --------------------------------------------eccccccCCCCCCCCcHHHHHHHHHHHcC-CCcceE
Confidence 99999999999999999999999999998 999999
Q ss_pred EEEechHHHHHhcccCCCCcEEEEEEcccccceeeccccccccCCCCCCCCcEEEecCCCccCCCCcccccccchhhhhc
Q psy4666 239 AILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTID 318 (828)
Q Consensus 239 AVvNDTVaTLLaeay~~~~~~IGLILGTGtNacYiE~~~~i~kl~gage~G~MiINtEwG~FG~~G~l~~~~T~fD~~iD 318 (828)
||+||||||+|+++|.+++|.||+|+|||+|+||++++++|++++|. +.|||+||+|||.||++|++++|+|+||+.+|
T Consensus 193 al~NDtv~tlla~~y~~~~~~iglIlGTG~na~yve~~~~i~~~~g~-~~g~m~In~EwG~f~~~~~~~~p~t~~D~~lD 271 (451)
T 1bdg_A 193 AVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMDGV-KEPEVVINTEWGAFGEKGELDCWRTQFDKSMD 271 (451)
T ss_dssp EEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCGGGCSC-SSSEEEEECCGGGTTTTSTTTTTCCHHHHHHH
T ss_pred EEEEchHHHHHHhcccCCCcEEEEEEeCCcceEEEEcCccccCcCCC-ccCcEEEecCcccCCCcccccCCCCcchhhhh
Confidence 99999999999999999999999999999999999999999999874 78999999999999999999999999999999
Q ss_pred ccCCCcchhHHHHhhccccHHHHHHHHHHHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhC
Q psy4666 319 DRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLA 398 (828)
Q Consensus 319 ~~S~npg~q~fEKmvSG~YLGELvRliLl~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lg 398 (828)
..|.|||+||||||+||+||||++|+++.++.+++.+|.+..|+.+.+++.|+|+++++|++|+++++..++.++...++
T Consensus 272 ~~s~~pg~q~~Ek~~SG~yLgel~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~i~~~~~~ 351 (451)
T 1bdg_A 272 IDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLH 351 (451)
T ss_dssp HTSSSTTSCTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCSGGGSTTCSCTTHHHHHTTCCTTCCHHHHHHHHHTSC
T ss_pred hcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccchHhhcCCCccchHHHhhhhccCccchHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999955589
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhc-cc--ceee-
Q psy4666 399 LPHATAQDCIDVRYLCRVVSQRSAHLASAGIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALI-SH--SVIV- 474 (828)
Q Consensus 399 l~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~-p~--~~i~- 474 (828)
++.++.+|++.++++|.+|++|||+++|++|||++++++++.++|++|||||+++|.|++++++++++++ |. +.+.
T Consensus 352 ~~~~~~~d~~~~~~va~~V~~RaA~lla~~ia~i~~~~~~~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l 431 (451)
T 1bdg_A 352 VPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRRINRSEVTVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRL 431 (451)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEE
Confidence 9877999999999999999999999999999999999999999999999999999999999999999985 33 3332
Q ss_pred ---ecccchhhhhccc
Q psy4666 475 ---GTGFNACYVERTE 487 (828)
Q Consensus 475 ---GtG~nAAyv~~~~ 487 (828)
|+|.|||+++++.
T Consensus 432 ~~dgs~iGAAllA~~~ 447 (451)
T 1bdg_A 432 SEDGSGKGAAAIAASC 447 (451)
T ss_dssp CTTHHHHHHHHHHTTC
T ss_pred CCCccHHHHHHHHHHH
Confidence 9999999987753
No 6
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=7.2e-91 Score=834.85 Aligned_cols=404 Identities=46% Similarity=0.837 Sum_probs=381.5
Q ss_pred chHHHHHHhhcccCCCCCCCccccccccccCCCCcccccEEEEEeCCceEEEEEEE-e-Cc--eeEEEEEEEecCCCccc
Q psy4666 2 SRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIY-A-GE--KFRMEHKTYPISPEIMT 77 (828)
Q Consensus 2 ~~f~~em~~GL~~~~~~~s~~~MlPT~v~~lP~G~E~G~fLalDLGGTn~Rv~lV~-~-G~--~~~~~~~~~~Ip~e~~~ 77 (828)
++|.+||++||++++|++|+++||||||+++|+|+|+|.|||||||||||||++|+ . |+ .+++.+++|+||++++.
T Consensus 489 ~~~~~em~~gL~~~~~~~~~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V~l~~g~~~~~~~~~~~~~ip~~~~~ 568 (917)
T 1cza_N 489 KRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQ 568 (917)
T ss_dssp HHHHHHHHHHHSHHHHTTCSSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEECSTTCEEEEEEEEECCCHHHHT
T ss_pred HHHHHHHHHHhcccCCCCCCCceECCCCCCCCCCCcceEEEEEEECCCcEEEEEEEeCCCcceeEEeeeeEEecCccccc
Confidence 68999999999988888899999999999999999999999999999999999999 5 54 68889999999999999
Q ss_pred CCccchHHHHHHHHHHHHhhccCCCCccceEEEEeccccccccchhhhhhhhccccccccccccCCCcccccCCeEEEec
Q psy4666 78 GPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRW 157 (828)
Q Consensus 78 g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFPv~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~ 157 (828)
+++++||||||+||++|+++++...+.+|+||||||||+|+++++ |.|
T Consensus 569 ~~~~~lfd~Ia~~i~~~l~~~~~~~~~l~lG~tfsfPv~q~~i~~-----------------------------~~L--- 616 (917)
T 1cza_N 569 GTGEELFDHIVSCISDFLDYMGIKGPRMPLGFTFSFPCQQTSLDA-----------------------------GIL--- 616 (917)
T ss_dssp SBHHHHHHHHHHHHHHHHHHHTCCSSCCEEEEEECSCEEEEETTE-----------------------------EEE---
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCccceeEEEEeeccccccccCc-----------------------------cEE---
Confidence 999999999999999999998877778999999999999999999 888
Q ss_pred cccceecccccchHHHHHHHHHHHhhcccccccccCccccccceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCccE
Q psy4666 158 TKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNV 237 (828)
Q Consensus 158 ~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~v 237 (828)
++|||||++++++|+||+++|+++++|+++++|+|
T Consensus 617 ---------------------------------------------~~WtKgf~~~~~~g~dv~~~L~~al~r~~~~~v~~ 651 (917)
T 1cza_N 617 ---------------------------------------------ITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDV 651 (917)
T ss_dssp ---------------------------------------------CCCCTTCCCBSCTTSBHHHHHHHHHHHHTSCCCEE
T ss_pred ---------------------------------------------CceecccccCCcCCCcHHHHHHHHHHhcCCCCceE
Confidence 89999999999999999999999999987699999
Q ss_pred EEEEechHHHHHhcccCCCCcEEEEEEcccccceeeccccccccCCCCCCCCcEEEecCCCccCCCCcccccccchhhhh
Q psy4666 238 VAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTI 317 (828)
Q Consensus 238 vAVvNDTVaTLLaeay~~~~~~IGLILGTGtNacYiE~~~~i~kl~gage~G~MiINtEwG~FG~~G~l~~~~T~fD~~i 317 (828)
+||+||||||||+++|.+++|.||+|+|||+|+||+|++++|+++.| +.|||+||+|||+||++++|++|+|+||+.+
T Consensus 652 val~NDtv~tlla~~y~~~~~~iglIlGTG~na~y~e~~~~i~~~~g--~~g~m~In~EwG~fg~~~~l~~~~T~~D~~~ 729 (917)
T 1cza_N 652 VAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG--DQGQMCINMEWGAFGDNGCLDDIRTHYDRLV 729 (917)
T ss_dssp EEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCTTSSC--CSSEEEEECCGGGTTTTSTTTTTCCHHHHHH
T ss_pred EEEEEccHHHHHHhccCCCCcEEEEEEeCCeeEEEEEcCccccCcCC--CcCcEEEecccccCCCcccccCCCCchhhhh
Confidence 99999999999999999999999999999999999999999999976 7899999999999999999999999999999
Q ss_pred cccCCCcchhHHHHhhccccHHHHHHHHHHHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhh
Q psy4666 318 DDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRL 397 (828)
Q Consensus 318 D~~S~npg~q~fEKmvSG~YLGELvRliLl~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~l 397 (828)
|+.|.|||+||||||+||+||||++|+++.++.+++.+|.+..++.|.+++.|+|++|++|+.|++ ++..++.++ +.+
T Consensus 730 d~~s~~pG~q~~Ek~~SG~yLgel~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~ie~d~~-~~~~~~~i~-~~~ 807 (917)
T 1cza_N 730 DEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRL-ALLQVRAIL-QQL 807 (917)
T ss_dssp HHTSTTTTSCTTGGGTSTTTHHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTCSCHHHHHHHTCSSC-CHHHHHHHH-HHH
T ss_pred hhcCCCCCCCchHHhhhHhHHHHHHHHHHHHhcccccccccccchhhccCCccchHHhhhhhcCcc-hhhHHHHHH-HHh
Confidence 999999999999999999999999999999999999999999999999999999999999998876 577888999 678
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC------CeEEEEEcCceeecchhHHHHHHHHHHhhcccc
Q psy4666 398 ALPHATAQDCIDVRYLCRVVSQRSAHLASAGIATLLNRMDF------SIVTVGVDGSVYRYHPYFHHMMLEKIPALISHS 471 (828)
Q Consensus 398 gl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLAAIl~~l~~------~~ItVGvDGSVy~~~p~f~~~L~e~lreL~p~~ 471 (828)
+++ ++.+|++.++++|.+|++|||+|+|++|||+++++++ ..++||||||||++||.|+++++++++++.|.+
T Consensus 808 ~~~-~~~~D~~~~~~ia~~v~~RaA~l~a~~iaai~~~~~~~~~~~~~~~~V~vdGsv~~~~p~f~~~~~~~l~~l~~~~ 886 (917)
T 1cza_N 808 GLN-STCDDSILVKTVCGVVSRRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPKC 886 (917)
T ss_dssp TCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHSTTE
T ss_pred CCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCccceEEEECCHHHHcCcHHHHHHHHHHHHhCCCC
Confidence 985 7999999999999999999999999999999999976 248999999999999999999999999999865
Q ss_pred eee------ecccchhhhhccc
Q psy4666 472 VIV------GTGFNACYVERTE 487 (828)
Q Consensus 472 ~i~------GtG~nAAyv~~~~ 487 (828)
.|. |+|.|||+++++.
T Consensus 887 ~v~~~~~~dgsg~GAAl~aa~~ 908 (917)
T 1cza_N 887 NVSFLLSEDGSGKGAALITAVG 908 (917)
T ss_dssp EEEEEECSSCSHHHHHHHHHHH
T ss_pred ceEEEEecCChHHHHHHHHHHH
Confidence 442 9999999999864
No 7
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=100.00 E-value=2.9e-88 Score=758.89 Aligned_cols=397 Identities=18% Similarity=0.253 Sum_probs=370.2
Q ss_pred chHHHHHHhhcccCCCCCCCccccccccccCCCCcccccEEEEEeCCceEEEEEEE-eCce-eEEEEEEEecCCCcccCC
Q psy4666 2 SRLNADIDKGLHKDTHATATVKCFPTFIQDLPQGTETGKFLALDLGGTNFRVLMIY-AGEK-FRMEHKTYPISPEIMTGP 79 (828)
Q Consensus 2 ~~f~~em~~GL~~~~~~~s~~~MlPT~v~~lP~G~E~G~fLalDLGGTn~Rv~lV~-~G~~-~~~~~~~~~Ip~e~~~g~ 79 (828)
++|..||+ ||+++ .|+++||||||+++|+|+|+|.||||||||||||+++|+ +|+. +++.+++|++|++.+.++
T Consensus 28 ~~~~~em~-gL~~~---~~~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~ 103 (457)
T 2yhx_A 28 SILTTRXD-DXDSS---AASIPMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAI 103 (457)
T ss_dssp HHHHHHHH-HHHSS---SCSSCCEECCCCCCCCSCCCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSC
T ss_pred HHHHHHhc-CCCCC---CCCCccCccccCCCCCCCccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCC
Confidence 68999999 99864 578999999999999999999999999999999999999 8864 778889999999989999
Q ss_pred ccchHHHHHHHHHHHHhhccCC-CCccceEEEEeccccccccchhhhhhhhccccccccccccCCCcccccCCeEEEecc
Q psy4666 80 GEQLFDYIAESLENFVREQKAE-NEHLPLGFTFSFPVDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWT 158 (828)
Q Consensus 80 ~~~lFd~IA~~i~~fl~e~~~~-~~~l~LGftFSFPv~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~ 158 (828)
+++|||+||++|.+|+++++.. .+.+++|||||||++|.++++ |.|
T Consensus 104 ~~~lfd~Ia~~i~~~~~~~~~~~~~~~~lGi~fs~P~~q~~~~~-----------------------------g~l---- 150 (457)
T 2yhx_A 104 PSDLWGNXAXSNAAFSSXEFSSXAGSVPLGFTFXEAGAKEXVIK-----------------------------GQI---- 150 (457)
T ss_dssp THHHHHHHHHHHHHHHHHHTSSCSSCEEEEEECCSCCCCSBTTC-----------------------------CBC----
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceeeEEEEEEEEeecCc-----------------------------eEE----
Confidence 9999999999999999987543 345789999999999999999 877
Q ss_pred ccceecccccchHHHHHHHHHHHhhcccccccccCccccccceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCccEE
Q psy4666 159 KGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSSTTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVV 238 (828)
Q Consensus 159 kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vv 238 (828)
++|||+|++++++ ||+++|+++++|+| +|++||
T Consensus 151 --------------------------------------------~~wtKgf~i~~~~--~v~~~L~~~l~r~g-lpv~vv 183 (457)
T 2yhx_A 151 --------------------------------------------TXQAXAFSLAXLX--KLISAMXNAXFPAG-DXXXSV 183 (457)
T ss_dssp --------------------------------------------SSCCTTCCCSSCS--SBHHHHHHHHHHHH-CCEEEE
T ss_pred --------------------------------------------EeeccCCCcchhH--HHHHHHHHhHhhcC-CcceeE
Confidence 7899999999988 99999999999998 899999
Q ss_pred EEEechHHHHHhcccCCCCcEEEEEEcccccceeeccccccccCCCC--C-CCCcEEEecCCCccCCCCcccccccchhh
Q psy4666 239 AILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENE--A-NKPFVVINTEWGAFGDDGALDFLLTEFDR 315 (828)
Q Consensus 239 AVvNDTVaTLLaeay~~~~~~IGLILGTGtNacYiE~~~~i~kl~ga--g-e~G~MiINtEwG~FG~~G~l~~~~T~fD~ 315 (828)
+|+||||||+|+++|.++++.||+|+|||+|+||++++++|+++++. . ..|+|+||+|||.|+++|++ +|+|+||+
T Consensus 184 al~NDa~~tll~e~~~~~~~~iglilGTGvgg~~i~~~~~i~kl~~~~~~~~~g~~~in~EwG~f~~~~~~-lp~t~~D~ 262 (457)
T 2yhx_A 184 ADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGGAGXMXICCDQSSFRKAFPS-LPQIXYLX 262 (457)
T ss_dssp EEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEECGGGSSCTTSCSSSCSSCCEEEECCCTTTTTTCSS-SCCCHHHH
T ss_pred EEEecchhhccchhhcCCccEEEEEECcEEEEEEEECCCcccccccccccccCCceEEEEEcccCCCCCCc-CCcccccc
Confidence 99999999999999999999999999999999999999999998651 2 47899999999999999988 67999999
Q ss_pred hhcccCCCcchhHHHHhhccccHHHHHHHHHHHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHH
Q psy4666 316 TIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQ 395 (828)
Q Consensus 316 ~iD~~S~npg~q~fEKmvSG~YLGELvRliLl~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~ 395 (828)
.+|..|.||| ||||||+||+||||++|+++.++.+++.+|.+ .|+.|.++++|+|++||+|+.+++++++.++.+|.+
T Consensus 263 ~lD~~s~~pG-q~fEkm~SG~yLGel~R~il~~~~~~~~lf~~-~~~~l~~~~~~~t~~ls~i~~d~~~~l~~~~~il~~ 340 (457)
T 2yhx_A 263 TLNXXSPXAX-KTFXKNSXAKNXGQSLRDVLMXFKXXGQXHXX-XAXSFXAANVENTSYPAKIQKLPHFDLRXXXDLFXG 340 (457)
T ss_dssp HHHHHSSCSC-CHHHHHHCGGGHHHHHHHHHHHHHHTTSSSSS-CCCSCCSTTCSCTHHHHHHHHCCSSSCHHHHHHHHH
T ss_pred ccccccCchH-HHHHHHhhhcCcHHHHHHHHHHHhcccccccc-cchhcccccCcChHHHHHHhcCCchhhhHHHHHHHH
Confidence 9999999999 99999999999999999999999999999999 999999999999999999999988999889999989
Q ss_pred hhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhcc------
Q psy4666 396 RLALPHATAQDCIDVRYLCRVVSQRSAHLASAGIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALIS------ 469 (828)
Q Consensus 396 ~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~p------ 469 (828)
.++++ +|.+|++.++++|.+|++|||+|+|++|+||+++++++.++||||||| ++||.|+++++++++++++
T Consensus 341 ~~~~~-~t~~D~~~v~~ia~~V~~RaA~l~A~~iaai~~~~~~~~~~V~vdGsv-~~~p~f~~~l~~~l~~l~~~~~~~~ 418 (457)
T 2yhx_A 341 DQGIA-XKTXMKXVVRRXLFLIAAYAFRLVVCXIXAICQKKGYSSGHIAAXGSX-RSYSGFSXNSATXNXNIYGWPQSAX 418 (457)
T ss_dssp HHTCC-CCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCSSEEEEEESTT-TTSTTHHHHHHHHHHHHHCCCCSSG
T ss_pred HhCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEECCc-ccCchHHHHHHHHHHHhhCcccccc
Confidence 99997 699999999999999999999999999999999999999999999999 9999999999999999973
Q ss_pred -ccee--e----ecccchhhhhccc
Q psy4666 470 -HSVI--V----GTGFNACYVERTE 487 (828)
Q Consensus 470 -~~~i--~----GtG~nAAyv~~~~ 487 (828)
.+.| . |||.|||+++++.
T Consensus 419 ~~~~v~~~~~~dgsg~GAAl~aa~~ 443 (457)
T 2yhx_A 419 XSKPIXITPAIDGXGAASXVIXSIA 443 (457)
T ss_dssp GGSSEEEEECCCTTTHHHHHHHHHH
T ss_pred cCcceEEEECCCchhhhHHHHHHHH
Confidence 3333 2 9999999999864
No 8
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=100.00 E-value=8.7e-41 Score=375.05 Aligned_cols=164 Identities=40% Similarity=0.686 Sum_probs=143.5
Q ss_pred eeeecccchhhhhcccccccccccCCCCeEEEecCCCCCCCCCCccccccccchhhhhcCCCccchhhhhhhcccchHHH
Q psy4666 472 VIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEI 551 (828)
Q Consensus 472 ~i~GtG~nAAyv~~~~~I~k~~~~~~~~~MiINtEWG~FGd~g~L~~~~T~fD~~lD~~S~nPG~Q~fEKMiSGmYLGEL 551 (828)
.|+|||+||||++++++|+|+++ +.++||||||||+||++++|++|+|+||++||+.|.|||+|+|||||||||||||
T Consensus 229 lI~GTGtNa~Y~E~~~~I~k~~~--~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEi 306 (470)
T 3f9m_A 229 MIVGTGCNACYMEEMQNVELVEG--DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGEL 306 (470)
T ss_dssp EEESSSEEEEEEEEGGGCTTSSC--CSSEEEEECCGGGTTTTSTTGGGCCHHHHHHHHHSSSTTSCHHHHTTCHHHHHHH
T ss_pred EEEecCCceEEeeeccccccccC--CCCcEEEeechhhcCCCcccCCCCCcccHHHhhcCCCCCceeeccccchhhHHHH
Confidence 56799999999999999999986 4578999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCCCccccccCcccccccceecccCCCCCchhHHHHHhhccccc-hh---HHHHHHHHHHHHHh
Q psy4666 552 VRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVVNDNSSQLIETQIRTLKS-SQ---FHLVQSKESNSAAN 627 (828)
Q Consensus 552 vRlILldl~~~g~LF~g~~~~~L~~~~~f~T~~lS~Ie~~~~~~d~s~~ll~~~~~~i~~-t~---~k~v~~~Vs~RAA~ 627 (828)
||+||++|+++++||++..|+.|.++|+|+|+|||.|++++.....+..++ .+++.... .+ +++||++|++|||.
T Consensus 307 vRliL~~l~~~~~lf~~~~~~~L~~~~~l~T~~ls~ie~d~~~~~~~~~il-~~l~~~~~~~d~~~vr~i~~~V~~RaA~ 385 (470)
T 3f9m_A 307 VRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDRKQIYNIL-STLGLRPSTTDCDIVRRACESVSTRAAH 385 (470)
T ss_dssp HHHHHHHHHHTTCSGGGCCCTTTTSTTCSCHHHHHHHHTCCSSCHHHHHHH-HHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCCcHHhcCCCCcCchHHhhhccCCCchHHHHHHH-HhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998543333344444 34542111 22 99999999999999
Q ss_pred hhhcccccccc
Q psy4666 628 KCNNEDESNEM 638 (828)
Q Consensus 628 l~aa~~~~~~~ 638 (828)
||||++.+-=.
T Consensus 386 L~Aa~iaail~ 396 (470)
T 3f9m_A 386 MCSAGLAGVIN 396 (470)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998643
No 9
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=368.79 Aligned_cols=166 Identities=39% Similarity=0.646 Sum_probs=143.8
Q ss_pred ceeeecccchhhhhcccccccccccCCCCeEEEecCCCCCCCCCCccccccccchhhhhcCCCccchhhhhhhcccchHH
Q psy4666 471 SVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGE 550 (828)
Q Consensus 471 ~~i~GtG~nAAyv~~~~~I~k~~~~~~~~~MiINtEWG~FGd~g~L~~~~T~fD~~lD~~S~nPG~Q~fEKMiSGmYLGE 550 (828)
..|+|||+||||++++++|+|+++ +.++||||||||+||+++++++|+|+||+.||+.|.|||+|+||||||||||||
T Consensus 204 glIlGTGtNa~y~e~~~~i~k~~~--~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~~PG~q~fEKmiSG~YLGE 281 (445)
T 3hm8_A 204 GLIVGTGTNACYMEELRNVAGVPG--DSGRMCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGE 281 (445)
T ss_dssp EEEESSSEEEEEEEEGGGCTTSCC--CSSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTGGGTSHHHHHH
T ss_pred EEEEeCCceEEEEEecccccccCC--CCCcEEEEcchhhcCCCCCCcCCCCccchHHhcCCCCCCceEeeeecchhhHHH
Confidence 366799999999999999999976 356899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCCCccccccCcccccccceecccCCCCCchhHHHHHhhccccc-hh---HHHHHHHHHHHHH
Q psy4666 551 IVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVVNDNSSQLIETQIRTLKS-SQ---FHLVQSKESNSAA 626 (828)
Q Consensus 551 LvRlILldl~~~g~LF~g~~~~~L~~~~~f~T~~lS~Ie~~~~~~d~s~~ll~~~~~~i~~-t~---~k~v~~~Vs~RAA 626 (828)
|+|+||++|+++++||++..|+.|.++++|+|+|||.||+++.....+..++ .+++.... .+ +++||++|++|||
T Consensus 282 ivRliL~~l~~~~~lf~~~~~~~L~~~~~l~T~~ls~ie~D~~~~~~~~~~l-~~l~~~~t~~d~~~vr~i~~~V~~RaA 360 (445)
T 3hm8_A 282 IVRHILLHLTSLGVLFRGQQIQRLQTRDIFKTKFLSEIESDSLALRQVRAIL-EDLGLPLTSDDALMVLEVCQAVSQRAA 360 (445)
T ss_dssp HHHHHHHHHHHHTSSGGGCCCGGGGSTTCSCHHHHHHHTCTTCCHHHHHHHH-HTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCCcHHHcCCCCCCcHHHHHHhcCCchHHHHHHHH-HHhCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997543222334444 33543111 11 9999999999999
Q ss_pred hhhhccccccccc
Q psy4666 627 NKCNNEDESNEMK 639 (828)
Q Consensus 627 ~l~aa~~~~~~~~ 639 (828)
.||||++.+--.|
T Consensus 361 ~L~Aa~iaai~~k 373 (445)
T 3hm8_A 361 QLCGAGVAAVVEK 373 (445)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999886544
No 10
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=100.00 E-value=5.7e-38 Score=353.91 Aligned_cols=166 Identities=27% Similarity=0.448 Sum_probs=142.6
Q ss_pred eeeecccchhhhhcccccccccc----c-CCCCeEEEecCCCCCCCCCCccccccccchhhhhcCCCccchhhhhhhccc
Q psy4666 472 VIVGTGFNACYVERTENVSTFEN----E-ANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGM 546 (828)
Q Consensus 472 ~i~GtG~nAAyv~~~~~I~k~~~----~-~~~~~MiINtEWG~FGd~g~L~~~~T~fD~~lD~~S~nPG~Q~fEKMiSGm 546 (828)
.|+|||+|+||++.+++|+|+++ . ...++||||||||+||++ ++.+|+|+||+.||+.|.|||+|+||||||||
T Consensus 229 lIlGTG~N~~y~e~~~~i~k~~~~~~~~~~~~~~miINtEwG~F~~~-~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~ 307 (485)
T 3o8m_A 229 IIIGTGVNGAYYDVVSGIEKLEGLLPEDIGPDSPMAINCEYGSFDNE-HLVLPRTKYDVIIDEESPRPGQQAFEKMTSGY 307 (485)
T ss_dssp EEESSSEEEEEEEEGGGCGGGTTTCCTTSCTTCEEEEECCGGGTTTT-CSSSCCCHHHHHHHHHSSSTTSCHHHHHHSTT
T ss_pred EEEecCcceEEEeeccccccccccccccCCCCCcEEEEcccccCCCC-cccCCCCchhhHHhhcCCCCCceeeccccccc
Confidence 56799999999999999999973 1 234689999999999654 55679999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHhcccccCCCCCccccccCcccccccceecccCC-CCCchhHHHHHhhccccc-hh---HHHHHHHH
Q psy4666 547 YMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADV-VNDNSSQLIETQIRTLKS-SQ---FHLVQSKE 621 (828)
Q Consensus 547 YLGELvRlILldl~~~g~LF~g~~~~~L~~~~~f~T~~lS~Ie~~~~-~~d~s~~ll~~~~~~i~~-t~---~k~v~~~V 621 (828)
|||||+|+||++|+++++||++..|+.|.++|+|+|+|||.|++++. +...+..++...++.... .+ +++||++|
T Consensus 308 YLGEivRlil~~l~~~~~lF~~~~~~~L~~~~~l~T~~ls~i~~d~~~~l~~~~~~l~~~l~~~~t~~d~~~vr~i~~~V 387 (485)
T 3o8m_A 308 YLGEIMRLVLLDLYDSGFIFKDQDISKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIETTVVERKLIRKLAELV 387 (485)
T ss_dssp THHHHHHHHHHHHHHTTSSSTTSCCGGGGSTTCSCTHHHHHHHHCCCTTCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCcccCCCCcHHhcCCCCcCcHHHHHHHcCCcchHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997533 234566677666664322 11 99999999
Q ss_pred HHHHHhhhhcccccccc
Q psy4666 622 SNSAANKCNNEDESNEM 638 (828)
Q Consensus 622 s~RAA~l~aa~~~~~~~ 638 (828)
++|||.||||++.+--.
T Consensus 388 ~~RAA~L~Aa~iaail~ 404 (485)
T 3o8m_A 388 GTRAARLTVCGVSAICD 404 (485)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988643
No 11
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=99.97 E-value=3.7e-32 Score=305.10 Aligned_cols=166 Identities=13% Similarity=0.115 Sum_probs=141.9
Q ss_pred eeeecccchhhhhccccccccccc--C-CCCeEEEecCCCCCCCCCCccccccccchhhhhcCCCccchhhhhhhcccch
Q psy4666 472 VIVGTGFNACYVERTENVSTFENE--A-NKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYM 548 (828)
Q Consensus 472 ~i~GtG~nAAyv~~~~~I~k~~~~--~-~~~~MiINtEWG~FGd~g~L~~~~T~fD~~lD~~S~nPG~Q~fEKMiSGmYL 548 (828)
.|+|||+|+||++..++|+|+++. . ..+.|+||||||.|++++++ +|+|+||++||..|.||| |+||||+|||||
T Consensus 207 lilGTGvgg~~i~~~~~i~kl~~~~~~~~~g~~~in~EwG~f~~~~~~-lp~t~~D~~lD~~s~~pG-q~fEkm~SG~yL 284 (457)
T 2yhx_A 207 IIFGSGVNAAYWCDSTXIGDAADGGXXGGAGXMXICCDQSSFRKAFPS-LPQIXYLXTLNXXSPXAX-KTFXKNSXAKNX 284 (457)
T ss_dssp EEESSSEEEEEEECGGGSSCTTSCSSSCSSCCEEEECCCTTTTTTCSS-SCCCHHHHHHHHHSSCSC-CHHHHHHCGGGH
T ss_pred EEECcEEEEEEEECCCcccccccccccccCCceEEEEEcccCCCCCCc-CCccccccccccccCchH-HHHHHHhhhcCc
Confidence 556999999999999999998642 2 35789999999999999888 789999999999999999 999999999999
Q ss_pred HHHHHHHHHHHHhcccccCCCCCccccccCcccccccceecccCCC-CCchhHHHHHhhcccc-chh---HHHHHHHHHH
Q psy4666 549 GEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVV-NDNSSQLIETQIRTLK-SSQ---FHLVQSKESN 623 (828)
Q Consensus 549 GELvRlILldl~~~g~LF~g~~~~~L~~~~~f~T~~lS~Ie~~~~~-~d~s~~ll~~~~~~i~-~t~---~k~v~~~Vs~ 623 (828)
|||+|++|+++++++.+|.+ .|+.|.++++|+|+|||.|++++.. .+.+..++...++... ..+ +++||.+|++
T Consensus 285 Gel~R~il~~~~~~~~lf~~-~~~~l~~~~~~~t~~ls~i~~d~~~~l~~~~~il~~~~~~~~t~~D~~~v~~ia~~V~~ 363 (457)
T 2yhx_A 285 GQSLRDVLMXFKXXGQXHXX-XAXSFXAANVENTSYPAKIQKLPHFDLRXXXDLFXGDQGIAXKTXMKXVVRRXLFLIAA 363 (457)
T ss_dssp HHHHHHHHHHHHHTTSSSSS-CCCSCCSTTCSCTHHHHHHHHCCSSSCHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccc-cchhcccccCcChHHHHHHhcCCchhhhHHHHHHHHHhCCCccchhhHHHHHHHHHHHH
Confidence 99999999999999999999 9999999999999999999975322 2236667766666321 122 8899999999
Q ss_pred HHHhhhhcccccccccc
Q psy4666 624 SAANKCNNEDESNEMKD 640 (828)
Q Consensus 624 RAA~l~aa~~~~~~~~~ 640 (828)
|||.|+|+|+.+--.+-
T Consensus 364 RaA~l~A~~iaai~~~~ 380 (457)
T 2yhx_A 364 YAFRLVVCXIXAICQKK 380 (457)
T ss_dssp HHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999998764443
No 12
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=99.97 E-value=3.9e-31 Score=296.34 Aligned_cols=164 Identities=35% Similarity=0.569 Sum_probs=141.4
Q ss_pred eeeecccchhhhhcccccccccccCCCCeEEEecCCCCCCCCCCccccccccchhhhhcCCCccchhhhhhhcccchHHH
Q psy4666 472 VIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEI 551 (828)
Q Consensus 472 ~i~GtG~nAAyv~~~~~I~k~~~~~~~~~MiINtEWG~FGd~g~L~~~~T~fD~~lD~~S~nPG~Q~fEKMiSGmYLGEL 551 (828)
.|+|||+||||++..++|+++++. +.++|+||||||+||+++++++|+|+||+.+|..|.|||+|+||||+||||||||
T Consensus 216 lIlGTG~na~yve~~~~i~~~~g~-~~g~m~In~EwG~f~~~~~~~~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~yLgel 294 (451)
T 1bdg_A 216 LIVGTGTNVAYIEDSSKVELMDGV-KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGEL 294 (451)
T ss_dssp EEESSSEEEEEEEETTTCGGGCSC-SSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSHHHHHHH
T ss_pred EEEeCCcceEEEEcCccccCcCCC-ccCcEEEecCcccCCCcccccCCCCcchhhhhhcCCCCCcccchhhhhhhHHHHH
Confidence 456999999999999999999874 4578999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccccCCCCCccccccCcccccccceecccCCC-CCchhHHHHHhhccc--cchh---HHHHHHHHHHHH
Q psy4666 552 VRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVV-NDNSSQLIETQIRTL--KSSQ---FHLVQSKESNSA 625 (828)
Q Consensus 552 vRlILldl~~~g~LF~g~~~~~L~~~~~f~T~~lS~Ie~~~~~-~d~s~~ll~~~~~~i--~~t~---~k~v~~~Vs~RA 625 (828)
+|++|+++.+++.+|.+..|+.|.+++.|+|+|||.|++++.. ...+..++...++.. ...+ ++++|.+|++||
T Consensus 295 ~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~va~~V~~Ra 374 (451)
T 1bdg_A 295 VRHIIVYLVEQKILFRGDLPERLKVRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRYACEMVVKRA 374 (451)
T ss_dssp HHHHHHHHHHTTSSGGGCCCSGGGSTTCSCTTHHHHHTTCCTTCCHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccccccccchHhhcCCCccchHHHhhhhccCccchHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999975422 223344444434421 1222 889999999999
Q ss_pred Hhhhhcccccc
Q psy4666 626 ANKCNNEDESN 636 (828)
Q Consensus 626 A~l~aa~~~~~ 636 (828)
|.++|+++.+-
T Consensus 375 A~lla~~ia~i 385 (451)
T 1bdg_A 375 AYLAGAGIACI 385 (451)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999664
No 13
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=99.93 E-value=1.1e-24 Score=229.59 Aligned_cols=275 Identities=18% Similarity=0.258 Sum_probs=205.6
Q ss_pred ccEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc--c
Q psy4666 39 GKFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP--V 115 (828)
Q Consensus 39 G~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP--v 115 (828)
+.+|+||+|||++|+++++ +|+. +...+++.|.. .+.+++++.+.+.+.+++++.+.....+ +|+++|.| +
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~i--l~~~~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~~~i-~~igi~~pG~v 79 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVV--QQKWSIETNIL---EDGKHIVPSIIESIRHRIDLYNMKKEDF-VGIGMGTPGSV 79 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCE--EEEEEEECCCT---TTTTTHHHHHHHHHHHHHHHTTCCGGGE-EEEEEEESSEE
T ss_pred cEEEEEEECCCEEEEEEECCCCCE--EEEEEEcCCCC---CCHHHHHHHHHHHHHHHHHHcCCCccce-eEEEEecccce
Confidence 4678999999999999999 8875 23445555542 2467899999999999998876543333 56666666 4
Q ss_pred cccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccCcc
Q psy4666 116 DMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSST 195 (828)
Q Consensus 116 ~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 195 (828)
+.. + |++
T Consensus 80 d~~---~-----------------------------g~v----------------------------------------- 86 (326)
T 2qm1_A 80 DIE---K-----------------------------GTV----------------------------------------- 86 (326)
T ss_dssp ETT---T-----------------------------TEE-----------------------------------------
T ss_pred eCC---C-----------------------------CEE-----------------------------------------
Confidence 433 2 444
Q ss_pred ccccceeeccccCcccCCCcCc-cHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccC----CCCcEEEEEEcccccc
Q psy4666 196 TISKCVLVRWTKGFKCEGVVGA-NVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIGVIVGTGFNA 270 (828)
Q Consensus 196 ~i~~~~n~~WtKgf~~~~v~G~-DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~----~~~~~IGLILGTGtNa 270 (828)
..++|+.| ++ . ++.+.|++.+ + +| |.|.||++++++++.+. +.++.+.+++|||+++
T Consensus 87 --~~~~~l~w-~~--------~~~l~~~l~~~~---~-~p---v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtGiG~ 148 (326)
T 2qm1_A 87 --VGAYNLNW-TT--------VQPVKEQIESAL---G-IP---FALDNDANVAALGERWKGAGENNPDVIFITLGTGVGG 148 (326)
T ss_dssp --ECBGGGTB-CS--------CBCHHHHHHHHH---C-SC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEE
T ss_pred --EecCCCCc-cC--------CchHHHHHHHHh---C-CC---EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCceEE
Confidence 23456788 33 4 7899999987 4 66 59999999999999764 5678999999999999
Q ss_pred eeeccccccccCCC-CCCCCcEEEecC--CCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHHH
Q psy4666 271 CYVERTENVSTFEN-EANKPFVVINTE--WGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMME 347 (828)
Q Consensus 271 cYiE~~~~i~kl~g-age~G~MiINtE--wG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl 347 (828)
+++.+++.+.+.++ ++|.|||.++.+ .+.||..| |+|.++|+.+|.+.++..+
T Consensus 149 giv~~G~l~~G~~g~aGE~Gh~~~~~~g~~c~cG~~g-----------------------cle~~~s~~~l~~~~~~~~- 204 (326)
T 2qm1_A 149 GIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCTCGKRG-----------------------CLETVSSATGVVRVARHLS- 204 (326)
T ss_dssp EEEETTEECCCSSSCTTCGGGSBSCTTSCBCTTSSBC-----------------------BTHHHHSHHHHHHHHHHHT-
T ss_pred EEEECCEEeecCCCcccccCcEEECCCCCcCCCCCcc-----------------------chHhhhCHHHHHHHHHHHh-
Confidence 99999998888888 899999999864 34577666 6899999999977665422
Q ss_pred HHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4666 348 KFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASA 427 (828)
Q Consensus 348 ~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAA 427 (828)
.. +. .+. .+..+..+. ..+ .++.++ +.++.++..|..+++++++++|.
T Consensus 205 ---~~-----~~-~~~----------~~~~~~~~~-~~~-~~~~v~-----------~~a~~gd~~a~~i~~~~~~~L~~ 252 (326)
T 2qm1_A 205 ---EE-----FA-GDS----------ELKQAIDDG-QDV-SSKDVF-----------EFAEKGDHFALMVVDRVCFYLGL 252 (326)
T ss_dssp ---TT-----CC-SCC----------HHHHHHHHT-CCC-CHHHHH-----------HHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ---hc-----cc-ccc----------hhhhccccc-cCC-CHHHHH-----------HHHHcCCHHHHHHHHHHHHHHHH
Confidence 10 00 000 011111110 111 234455 55567789999999999999999
Q ss_pred HHHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhc
Q psy4666 428 GIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALI 468 (828)
Q Consensus 428 gLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~ 468 (828)
+|+++++.++|+.|++| |++....|.|.+.+++.+++..
T Consensus 253 ~i~~l~~~l~p~~Ivlg--Gg~~~~~~~~~~~l~~~l~~~~ 291 (326)
T 2qm1_A 253 ATGNLGNTLNPDSVVIG--GGVSAAGEFLRSRVEKYFQEFT 291 (326)
T ss_dssp HHHHHHHHHCCSEEEEE--ESGGGGTHHHHHHHHHHHHHTS
T ss_pred HHHHHHHhcCCCEEEEc--ChhhhchHHHHHHHHHHHHHhh
Confidence 99999999999998888 9999999999999999998874
No 14
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=99.93 E-value=8.8e-25 Score=232.47 Aligned_cols=270 Identities=16% Similarity=0.166 Sum_probs=202.2
Q ss_pred ccEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc--c
Q psy4666 39 GKFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP--V 115 (828)
Q Consensus 39 G~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP--v 115 (828)
+.+|+||+|||++|+++++ +|+... ...++.| .+.+++++.|++.+.+++++. . ..|+++|.| +
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~i~~--~~~~~~~-----~~~~~~~~~i~~~i~~~~~~~-----~-i~gigi~~pG~v 68 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGRILS--TFKVATP-----PTAEGIVDAICAAVAGASEGH-----D-VEAVGIGAAGYV 68 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCBCC--CEEEECC-----SSHHHHHHHHHHHHHHHHTTC-----C-EEEEEEEESSEE
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEE--EEEeeCC-----CCHHHHHHHHHHHHHHHHhhc-----C-ceEEEEeccccE
Confidence 3578999999999999999 887522 2333433 236789999999999887642 1 367777766 4
Q ss_pred cccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccCcc
Q psy4666 116 DMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSST 195 (828)
Q Consensus 116 ~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 195 (828)
+.. + |++
T Consensus 69 d~~---~-----------------------------g~v----------------------------------------- 75 (321)
T 3vgl_A 69 DDK---R-----------------------------ATV----------------------------------------- 75 (321)
T ss_dssp CTT---S-----------------------------SCE-----------------------------------------
T ss_pred eCC---C-----------------------------CEE-----------------------------------------
Confidence 432 1 333
Q ss_pred ccccceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccC----CCCcEEEEEEcccccce
Q psy4666 196 TISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIGVIVGTGFNAC 271 (828)
Q Consensus 196 ~i~~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~----~~~~~IGLILGTGtNac 271 (828)
..++|+.| ++ .++.+.|++.+ + +| |.|.||++++++++.+. +.++.+.+++|||++++
T Consensus 76 --~~~~~l~w-~~--------~~l~~~l~~~~---~-~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG~g 137 (321)
T 3vgl_A 76 --LFAPNIDW-RH--------EPLKDKVEQRV---G-LP---VVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGG 137 (321)
T ss_dssp --EECSSSCC-EE--------ECHHHHHHHHH---C-SC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEE
T ss_pred --EeCCCCCC-cC--------CCHHHHHhhhh---C-CC---EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcceEEE
Confidence 34566788 33 56899999987 4 66 59999999999999764 56899999999999999
Q ss_pred eeccccccccCCC-CCCCCcEEEec--CCCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHHHH
Q psy4666 272 YVERTENVSTFEN-EANKPFVVINT--EWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEK 348 (828)
Q Consensus 272 YiE~~~~i~kl~g-age~G~MiINt--EwG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl~ 348 (828)
++.+++.+.+.++ ++|.|||.++. +.+.||..| |+|.++|+..|-+.++.....
T Consensus 138 ii~~G~l~~G~~g~aGEiGh~~v~~~g~~c~cG~~g-----------------------clE~~~S~~al~~~~~~~~~~ 194 (321)
T 3vgl_A 138 IIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQG-----------------------CWEQYASGRALVRYAKQRANA 194 (321)
T ss_dssp EEETTEECCCTTSCCCCGGGSBSSTTCSBCTTSCBS-----------------------BGGGTSSHHHHHHHHHHHHHH
T ss_pred EEECCEEecCCCCCCccccceEecCCCCCCCCCCcC-----------------------cHHHhcCHHHHHHHHHHHhhc
Confidence 9999999888888 89999999974 456688877 599999999998877765432
Q ss_pred HhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4666 349 FTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASAG 428 (828)
Q Consensus 349 l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAg 428 (828)
..... ..+......+...+ ..+.++ +.++.++..|..+++++++++|.+
T Consensus 195 ~~~~~-------------------~~~~~~~~~~~~~~-~~~~i~-----------~~a~~gD~~a~~~~~~~~~~La~~ 243 (321)
T 3vgl_A 195 TPENA-------------------AVLLGLGDGSVDGI-EGKHIS-----------EAARQGDPVAVDSFRELARWAGAG 243 (321)
T ss_dssp CGGGC-------------------HHHHHTTTSSSTTC-CHHHHH-----------HHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcch-------------------hhhhhcccCccccC-CHHHHH-----------HHHHcCCHHHHHHHHHHHHHHHHH
Confidence 21100 00000000000011 234455 556777899999999999999999
Q ss_pred HHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhc
Q psy4666 429 IATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALI 468 (828)
Q Consensus 429 LAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~ 468 (828)
|+++++.++|+.|++| |++.+..+.|.+.+++.+++..
T Consensus 244 i~~l~~~l~p~~Ivlg--Ggi~~~~~~l~~~l~~~l~~~~ 281 (321)
T 3vgl_A 244 LADLASLFDPSAFIVG--GGVSDEGELVLDPIRKSFRRWL 281 (321)
T ss_dssp HHHHHHHHCCSEEEEE--SGGGGGTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCEEEEe--ChhhcchHHHHHHHHHHHHHhc
Confidence 9999999999999999 9999999999999999998765
No 15
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.92 E-value=1.3e-23 Score=231.89 Aligned_cols=269 Identities=16% Similarity=0.181 Sum_probs=204.5
Q ss_pred cccEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc--
Q psy4666 38 TGKFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP-- 114 (828)
Q Consensus 38 ~G~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP-- 114 (828)
.+.+++||+|||++|+++++ +|+.. ....++.|.. +.+++++.|++.+.+++.+.+.....+ +|+++|.|
T Consensus 107 ~~~~lGIDiGgt~i~~~l~d~~G~il--~~~~~~~~~~----~~~~~~~~l~~~i~~~~~~~~~~~~~i-~gigi~~pG~ 179 (429)
T 1z05_A 107 GWQFLSMRLGRGYLTIALHELGGEVL--IDTKIDIHEI----DQDDVLARLLFEIEEFFQTYAAQLDRV-TSIAITLPGL 179 (429)
T ss_dssp TEEEEEEEEETTEEEEEEEETTSCEE--EEEEEECCCC----BHHHHHHHHHHHHHHHHHHTTTTCCEE-EEEEEEESSE
T ss_pred CCEEEEEEECCCEEEEEEECCCCCEE--EEEEEcCCCC----CHHHHHHHHHHHHHHHHHhcCCCcCce-EEEEEeccCc
Confidence 45688999999999999999 88752 2345555532 367899999999999998876543333 56666665
Q ss_pred ccccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccCc
Q psy4666 115 VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSS 194 (828)
Q Consensus 115 v~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 194 (828)
++.. + |++
T Consensus 180 vd~~---~-----------------------------g~v---------------------------------------- 187 (429)
T 1z05_A 180 VNSE---Q-----------------------------GIV---------------------------------------- 187 (429)
T ss_dssp EETT---T-----------------------------TEE----------------------------------------
T ss_pred EeCC---C-----------------------------CeE----------------------------------------
Confidence 5543 2 444
Q ss_pred cccccceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccC----CCCcEEEEEEcccccc
Q psy4666 195 TTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIGVIVGTGFNA 270 (828)
Q Consensus 195 ~~i~~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~----~~~~~IGLILGTGtNa 270 (828)
..++|+.|. +.|+.+.|++.+ + +| |.|.||++++++++.+. +.++.+.+++|||+++
T Consensus 188 ---~~~~~l~w~---------~~~l~~~L~~~~---~-~p---V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~ 248 (429)
T 1z05_A 188 ---LQMPHYNVK---------NLALGPEIYKAT---G-LP---VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGA 248 (429)
T ss_dssp ---EECSSSBCS---------SBCHHHHHHHHH---C-SC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEE
T ss_pred ---eecCCCCCC---------CCCHHHHHHHHh---C-CC---EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEEE
Confidence 234567783 357999999987 4 66 59999999999999765 5689999999999999
Q ss_pred eeeccccccccCCC-CCCCCcEEEec--CCCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHHH
Q psy4666 271 CYVERTENVSTFEN-EANKPFVVINT--EWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMME 347 (828)
Q Consensus 271 cYiE~~~~i~kl~g-age~G~MiINt--EwG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl 347 (828)
|++.+++.+.+.++ ++|.|||.++. +.|.||..| |+|.++|+..|-+.++..+.
T Consensus 249 giv~~G~l~~G~~g~AGEiGH~~v~~~g~~c~cG~~g-----------------------clE~~~S~~al~~~~~~~~~ 305 (429)
T 1z05_A 249 GIVLDGRVLQGRHGNIGELGHIQIDPQGKRCHCGNYG-----------------------CLETVASSQAIRDQVTARIQ 305 (429)
T ss_dssp EEEETTEECCTTTTCTTBCTTSBCCTTCCBCTTSCBS-----------------------BTHHHHSHHHHHHHHHHHHH
T ss_pred EEEECCEEeeCCCCcccccCceEEcCCCCCCCCCCCc-----------------------chHHHhCHHHHHHHHHHHhh
Confidence 99999998888877 89999999974 345677777 58999999998766654321
Q ss_pred HHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4666 348 KFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASA 427 (828)
Q Consensus 348 ~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAA 427 (828)
.+. .+.+..+... .++.++ +.++.++..|..+++++++++|.
T Consensus 306 ----~~~------~~~l~~~~~~-----------------~~~~i~-----------~~a~~gD~~a~~il~~~~~~L~~ 347 (429)
T 1z05_A 306 ----AGE------PSCLATVEEI-----------------SIEDIC-----------AAAADGDPLAVDVIQQLGRYLGA 347 (429)
T ss_dssp ----TTC------CCTTTTCSSC-----------------CHHHHH-----------HHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ----ccc------ccccccccCC-----------------CHHHHH-----------HHHHcCCHHHHHHHHHHHHHHHH
Confidence 110 0111000001 234444 55567788999999999999999
Q ss_pred HHHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhh
Q psy4666 428 GIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPAL 467 (828)
Q Consensus 428 gLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL 467 (828)
+|+++++.++|+.|+|| |++....|.|.+.+++.+++.
T Consensus 348 ~i~~l~~~ldP~~Ivlg--G~i~~~~~~l~~~l~~~l~~~ 385 (429)
T 1z05_A 348 AIAIVINLFNPEKILIG--GVINQAKSILYPSIEQCIREQ 385 (429)
T ss_dssp HHHHHHHHHCCSEEEEE--SGGGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEe--CccccchHHHHHHHHHHHHHh
Confidence 99999999999999998 999999999999999999876
No 16
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=99.91 E-value=4.4e-23 Score=220.45 Aligned_cols=253 Identities=17% Similarity=0.216 Sum_probs=195.1
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc--cc
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP--VD 116 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP--v~ 116 (828)
.+|+||+|||++|+++++ +|+.. ...+++.|.. +.+++++.|.+.+.+++.+.+. ..|+++|.| ++
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~il--~~~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~-----~~gigi~~pG~vd 93 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLERV--ATERVPTPTD----DYPLLLETIAGLVAKYDQEFAC-----EGKIGLGLPGMED 93 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEE--EEEEEECCTT----CHHHHHHHHHHHHHHHHHHHTS-----CCEEEEEESEEEC
T ss_pred EEEEEEECCCEEEEEEEeCCCcEE--EEEEecCCCC----CHHHHHHHHHHHHHHHHHhcCC-----ccEEEEEeeccEe
Confidence 589999999999999999 88752 3445665542 4678999999999888776531 356666666 44
Q ss_pred ccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccCccc
Q psy4666 117 MMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSSTT 196 (828)
Q Consensus 117 q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 196 (828)
.. + |++
T Consensus 94 ~~---~-----------------------------g~v------------------------------------------ 99 (327)
T 4db3_A 94 AD---D-----------------------------ATV------------------------------------------ 99 (327)
T ss_dssp TT---T-----------------------------CCE------------------------------------------
T ss_pred CC---C-----------------------------CEE------------------------------------------
Confidence 32 2 333
Q ss_pred cccceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccC----CCCcEEEEEEccccccee
Q psy4666 197 ISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIGVIVGTGFNACY 272 (828)
Q Consensus 197 i~~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~----~~~~~IGLILGTGtNacY 272 (828)
..+|+.|-++ .|+.+.|++.+ + +|| .|.||++++++++.+. +.++.+.+++|||+++++
T Consensus 100 --~~~~~~~~~~--------~~l~~~l~~~~---~-~pV---~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtGiG~gi 162 (327)
T 4db3_A 100 --LTVNVPAAKG--------KPLRADLEAKI---G-RSV---KIENDANCFALSEAWDEELQDAPSVMGLILGTGFGGGL 162 (327)
T ss_dssp --EESSSGGGTT--------SCHHHHHHHHH---S-SCC---EEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSSEEEEE
T ss_pred --EcCCCccccC--------CCHHHHHHHHH---C-CCE---EEecchhHHHHHHHHhCCCCCCCcEEEEEeCccceEEE
Confidence 1245666444 56999999987 4 674 9999999999999876 467899999999999999
Q ss_pred eccccccccCCC-CCCCCcEEEec------------CCCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHH
Q psy4666 273 VERTENVSTFEN-EANKPFVVINT------------EWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMG 339 (828)
Q Consensus 273 iE~~~~i~kl~g-age~G~MiINt------------EwG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLG 339 (828)
+.+++.+.+.++ ++|.|||.++. ..|.||..| |+|.++|+..|-
T Consensus 163 i~~G~l~~G~~g~aGEiGh~~v~~~~~~~~~~~~~g~~C~cG~~g-----------------------clE~~~S~~al~ 219 (327)
T 4db3_A 163 IYEGKVFSGRNNVAGELGHMRLPLDAWFHLGDNAPLLGCGCGKKG-----------------------CLDSYLSGRGFE 219 (327)
T ss_dssp EETTEECCCTTSCTTCGGGSBCCHHHHHHTCTTCCCCBCTTSCBS-----------------------BGGGTSSHHHHH
T ss_pred EECCEEeecCCCcCcccccEEeccccccccccccCCCcCCCCCcc-----------------------hhHhhhCHHHHH
Confidence 999998888877 89999999964 345678777 589999999997
Q ss_pred HHHHHHHHHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHH
Q psy4666 340 EIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQ 419 (828)
Q Consensus 340 ELvRliLl~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~ 419 (828)
+..+... . + .+ ..+.++ +.++.++..|..+++
T Consensus 220 ~~~~~~~----~----------~------~~-----------------~~~~i~-----------~~a~~gD~~a~~~~~ 251 (327)
T 4db3_A 220 LLYAHYY----G----------E------EK-----------------KAIDII-----------KANAAGDEKAAEHVE 251 (327)
T ss_dssp HHHHHHH----S----------C------CC-----------------CHHHHH-----------HHHHHTCHHHHHHHH
T ss_pred HHHHHhc----C----------C------CC-----------------CHHHHH-----------HHHHcCCHHHHHHHH
Confidence 6554321 0 0 01 123444 455677899999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhc
Q psy4666 420 RSAHLASAGIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALI 468 (828)
Q Consensus 420 RAA~LlAAgLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~ 468 (828)
++++++|.+|+++++.++|+.|+|| |++... +.|.+.+++.+++..
T Consensus 252 ~~~~~La~~i~~l~~~l~p~~Ivlg--Ggi~~~-~~l~~~l~~~l~~~~ 297 (327)
T 4db3_A 252 RFMELLAICFGNIFTANDPHVVALG--GGLSNF-ELIYEEMPKRVPKYL 297 (327)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEE--SGGGGC-THHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEe--Ccccch-HHHHHHHHHHHHHHh
Confidence 9999999999999999999999999 999876 678889999888765
No 17
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=99.91 E-value=2.3e-23 Score=227.75 Aligned_cols=268 Identities=13% Similarity=0.168 Sum_probs=202.0
Q ss_pred cccEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc--
Q psy4666 38 TGKFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP-- 114 (828)
Q Consensus 38 ~G~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP-- 114 (828)
.+.+|+||+|||++|+++++ +|+... ...++.|. .+.+++++.+++.+.+++++.+.....+ +|+++|.|
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~~G~il~--~~~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~~~~i-~gigi~~pG~ 156 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDLSSKLVV--EESQELAL----KDDLPLLDRIISHIDQFFIRHQKKLERL-TSIAITLPGI 156 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEETTCCEEE--EEEEECCS----SCSSCHHHHHHHHHHHHHHHTGGGCCCE-EEEEEEESSE
T ss_pred ccEEEEEEEcCCEEEEEEEcCCCCEEE--EEEecCCC----CCHHHHHHHHHHHHHHHHHhcCCCcCce-eEEEEEeecC
Confidence 45689999999999999999 887532 33445442 2467899999999999999876543333 56666665
Q ss_pred ccccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccCc
Q psy4666 115 VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSS 194 (828)
Q Consensus 115 v~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 194 (828)
++.. + |++
T Consensus 157 vd~~---~-----------------------------g~v---------------------------------------- 164 (406)
T 1z6r_A 157 IDTE---N-----------------------------GIV---------------------------------------- 164 (406)
T ss_dssp EETT---T-----------------------------TEE----------------------------------------
T ss_pred EeCC---C-----------------------------CEE----------------------------------------
Confidence 5443 2 444
Q ss_pred cccccceee-ccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccC----CCCcEEEEEEccccc
Q psy4666 195 TTISKCVLV-RWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIGVIVGTGFN 269 (828)
Q Consensus 195 ~~i~~~~n~-~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~----~~~~~IGLILGTGtN 269 (828)
..++|+ .|. +.|+.+.|++.+ + +| |.|.||++++++++.+. +.++.+.+++|||++
T Consensus 165 ---~~~~~l~~w~---------~~~l~~~l~~~~---~-~p---v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG 225 (406)
T 1z6r_A 165 ---HRMPFYEDVK---------EMPLGEALEQHT---G-VP---VYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVG 225 (406)
T ss_dssp ---EECTTCTTCS---------SBCHHHHHHHHH---S-SC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEE
T ss_pred ---ecCCCCCCcc---------CCCHHHHHHHHH---C-CC---EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEE
Confidence 234556 673 467999999987 4 66 59999999999999765 567899999999999
Q ss_pred ceeeccccccccCCC-CCCCCcEEEec--CCCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHH
Q psy4666 270 ACYVERTENVSTFEN-EANKPFVVINT--EWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMM 346 (828)
Q Consensus 270 acYiE~~~~i~kl~g-age~G~MiINt--EwG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliL 346 (828)
+|++.+++.+.+.++ ++|.|||.++. ..|.||..| |+|.++|+..|-+.++..+
T Consensus 226 ~giv~~G~l~~G~~g~AGEiGh~~v~~~g~~c~cG~~g-----------------------clE~~~S~~al~~~~~~~~ 282 (406)
T 1z6r_A 226 AGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNHG-----------------------CLETIASVDSILELAQLRL 282 (406)
T ss_dssp EEEEETTEETTTTSSCCBCGGGSBSCTTSCBCTTSCBS-----------------------BTHHHHSHHHHHHHHHHHH
T ss_pred EEEEECCEEeecCCCcCccCCceEecCCCCCCCCCCcc-----------------------chHHHcCHHHHHHHHHHhh
Confidence 999999998888887 89999999974 335577766 6899999999876655432
Q ss_pred HHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy4666 347 EKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLAS 426 (828)
Q Consensus 347 l~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlA 426 (828)
. . .+. ..+ . .+.. .++.++ +.+..++..|..+++++++++|
T Consensus 283 ~---~---~~~----~~~-~--------------~~~~---~~~~v~-----------~~a~~gD~~a~~~l~~~~~~L~ 323 (406)
T 1z6r_A 283 N---Q---SMS----SML-H--------------GQPL---TVDSLC-----------QAALRGDLLAKDIITGVGAHVG 323 (406)
T ss_dssp T---T---CTT----CGG-G--------------SSCC---CHHHHH-----------HHHHTTCHHHHHHHHHHHHHHH
T ss_pred h---c---ccc----ccc-C--------------cccC---CHHHHH-----------HHHHcCCHHHHHHHHHHHHHHH
Confidence 0 0 000 000 0 0000 234444 4556778899999999999999
Q ss_pred HHHHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhh
Q psy4666 427 AGIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPAL 467 (828)
Q Consensus 427 AgLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL 467 (828)
.+++++++.++|+.|+|| |++....+.|.+.+++.+++.
T Consensus 324 ~~i~~l~~~ldP~~Ivlg--G~i~~~~~~l~~~i~~~l~~~ 362 (406)
T 1z6r_A 324 RILAIMVNLFNPQKILIG--SPLSKAADILFPVISDSIRQQ 362 (406)
T ss_dssp HHHHHHHHHHCCSEEEEE--SGGGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEe--CccchhhHHHHHHHHHHHHHh
Confidence 999999999999999998 999998999999999998876
No 18
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.90 E-value=5.9e-23 Score=223.41 Aligned_cols=251 Identities=13% Similarity=0.137 Sum_probs=194.6
Q ss_pred cccEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc--
Q psy4666 38 TGKFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP-- 114 (828)
Q Consensus 38 ~G~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP-- 114 (828)
.+.+|+||+|||++|+++++ +|+.. ....++.|.. .+.+++++.+++.+.+++++.+.....+ +|+++|.|
T Consensus 86 ~~~~lGIDiGgt~i~~~l~d~~G~vl--~~~~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~~~i-~gigi~~pG~ 159 (380)
T 2hoe_A 86 CAYVLGIEVTRDEIAACLIDASMNIL--AHEAHPLPSQ---SDREETLNVMYRIIDRAKDMMEKLGSKL-SALTVAAPGP 159 (380)
T ss_dssp GCEEEEEEECSSEEEEEEEETTCCEE--EEEEEECCSS---CCHHHHHHHHHHHHHHHHHHHHHTTCCC-CEEEEEESSC
T ss_pred CCeEEEEEECCCEEEEEEECCCCCEE--EEEEEccCCC---CCHHHHHHHHHHHHHHHHHhcCCCcCcE-EEEEEEeecc
Confidence 45688999999999999999 88753 2345555542 1467899999999999998876543333 57766666
Q ss_pred ccccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccCc
Q psy4666 115 VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSS 194 (828)
Q Consensus 115 v~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 194 (828)
++.. + |++
T Consensus 160 vd~~---~-----------------------------g~v---------------------------------------- 167 (380)
T 2hoe_A 160 IDTE---R-----------------------------GII---------------------------------------- 167 (380)
T ss_dssp EETT---T-----------------------------TEE----------------------------------------
T ss_pred EECC---C-----------------------------CEE----------------------------------------
Confidence 4432 2 444
Q ss_pred cccccceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccCCC--CcEEEEEEccccccee
Q psy4666 195 TTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHK--HCKIGVIVGTGFNACY 272 (828)
Q Consensus 195 ~~i~~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~~~--~~~IGLILGTGtNacY 272 (828)
..++++.|. +.|+.+.|++.+ + +| |.|.||++++++++.+.+. ++.+.+++|||+++|+
T Consensus 168 ---~~~~~l~w~---------~~~l~~~l~~~~---~-~p---V~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~gi 228 (380)
T 2hoe_A 168 ---IDPRNFPLS---------QIPLANLLKEKY---G-IE---VWVENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGI 228 (380)
T ss_dssp ---CCCSSCTTB---------TSCHHHHHHHHH---C-SE---EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEE
T ss_pred ---eccCCCCCc---------CCChHHHHHHHh---C-CC---EEEechHHHHHHHHHHhCCCCCcEEEEEeCCceEEEE
Confidence 234567883 467999999987 4 55 6999999999999987654 8999999999999999
Q ss_pred eccccccccCCC-CCCCCcEEEecC-CCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHHHHHh
Q psy4666 273 VERTENVSTFEN-EANKPFVVINTE-WGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFT 350 (828)
Q Consensus 273 iE~~~~i~kl~g-age~G~MiINtE-wG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl~l~ 350 (828)
+.+++.+.+.++ ++|.|||.++.+ .|.||.. .|+|.++|+..|.+
T Consensus 229 v~~G~l~~G~~g~aGEiGh~~v~~~~~c~cG~~-----------------------gclE~~~s~~~l~~---------- 275 (380)
T 2hoe_A 229 IIDGELYRGENGYAGEIGYTRVFNGNEYVFLED-----------------------VCNENVVLKHVLSM---------- 275 (380)
T ss_dssp EETTEECCCSSSCCCCGGGCEEECSSSEEEHHH-----------------------HHCHHHHHHHHHHH----------
T ss_pred EECCEEeccCCCccccccceEecCCCCCCCCCc-----------------------cHHHHHcCHHHHHH----------
Confidence 999999888888 899999999754 2334443 37999999977743
Q ss_pred hcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4666 351 EEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASAGIA 430 (828)
Q Consensus 351 ~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLA 430 (828)
. .+ .++ +.+..++..|..+++++++++|.+|+
T Consensus 276 ---~------~~----------------------------~v~-----------~~a~~gD~~a~~~l~~~~~~La~~i~ 307 (380)
T 2hoe_A 276 ---G------FS----------------------------SLA-----------EARDSGDVRVKEYFDDIARYFSIGLL 307 (380)
T ss_dssp ---C------CC-----------------------------TT-----------HHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ---H------HH----------------------------HHH-----------HHHHCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 00 011 33455677888999999999999999
Q ss_pred HHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhc
Q psy4666 431 TLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALI 468 (828)
Q Consensus 431 AIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~ 468 (828)
++++.++|+.|++| |++....|.|.+.+++.+++..
T Consensus 308 ~l~~~ldP~~Ivlg--G~~~~~~~~l~~~l~~~l~~~~ 343 (380)
T 2hoe_A 308 NLIHLFGISKIVIG--GFFKELGENFLKKIKIEVETHL 343 (380)
T ss_dssp HHHHHHCCCEEEEE--EGGGGGHHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCCEEEEc--CchhhhhHHHHHHHHHHHHHhc
Confidence 99999999999998 9999888999999999998875
No 19
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=99.89 E-value=8.5e-23 Score=223.42 Aligned_cols=251 Identities=20% Similarity=0.255 Sum_probs=190.9
Q ss_pred cccEEEEEeCCceEEEEEEEeCceeEEEEE-EEecCCCcccCCccchHHHHHH---HHHHHHhhccCCCCccceEEEEec
Q psy4666 38 TGKFLALDLGGTNFRVLMIYAGEKFRMEHK-TYPISPEIMTGPGEQLFDYIAE---SLENFVREQKAENEHLPLGFTFSF 113 (828)
Q Consensus 38 ~G~fLalDLGGTn~Rv~lV~~G~~~~~~~~-~~~Ip~e~~~g~~~~lFd~IA~---~i~~fl~e~~~~~~~l~LGftFSF 113 (828)
.+.+|++|+|||++|++++++|+. +... .++.+.. +.+++++.|.+ .+.+++. . -..|+++|+
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d~G~i--l~~~~~~~~~~~----~~~~~l~~i~~~~~~i~~~~~------~-~i~gIGIav 74 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQGGKE--IADPVVLPACAD----CLDKCLGNLVEGFKAIQAGLP------E-APVAISFAF 74 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEETTEE--CSCCEEEECCTT----CHHHHHHHHHHHHHHHHTTCS------S-CCCEEEEEC
T ss_pred CCEEEEEEECcceEEEEEEECCEE--EEEEEEEECCCC----CHHHHHHHHHHHHHHHHHHhh------c-CCeEEEEEe
Confidence 446789999999999999985543 1223 4555543 46788888888 6665543 1 246777777
Q ss_pred c--ccccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccc
Q psy4666 114 P--VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLC 191 (828)
Q Consensus 114 P--v~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 191 (828)
| ++.. + |++
T Consensus 75 PG~Vd~~---~-----------------------------G~i------------------------------------- 85 (366)
T 3mcp_A 75 PGPADYQ---A-----------------------------GII------------------------------------- 85 (366)
T ss_dssp CSSEETT---T-----------------------------TEE-------------------------------------
T ss_pred cceEeCC---C-----------------------------CEE-------------------------------------
Confidence 7 5543 2 555
Q ss_pred cCccccccceee-ccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccCC---------------
Q psy4666 192 SSSTTISKCVLV-RWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDH--------------- 255 (828)
Q Consensus 192 ~~~~~i~~~~n~-~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~~--------------- 255 (828)
..++|+ .|..+ .|+.+.|++.+ + +| |.|.||++++++++.+.+
T Consensus 86 ------~~~~nlp~w~~~--------~~l~~~L~~~~---g-~P---V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~ 144 (366)
T 3mcp_A 86 ------GDLPNFPSFRGG--------VALGPFLEDIF---G-IP---VFINNDGSLFAYGEALTGVLPEINRRLREAGST 144 (366)
T ss_dssp ------CCCTTCGGGTTC--------BCHHHHHHHHH---C-SC---EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCC
T ss_pred ------EeCCCcccccCC--------CCHHHHHHHHH---C-CC---EEEechhhHHHHHHHHhCCCccccccccccccc
Confidence 345667 78324 56999999987 4 66 599999999999997755
Q ss_pred --CCcEEEEEEcccccceeeccccccccCCC-CCCCCcEEEecCCCccCCCCcccccccchhhhhcccCCCcchhHHHHh
Q psy4666 256 --KHCKIGVIVGTGFNACYVERTENVSTFEN-EANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKM 332 (828)
Q Consensus 256 --~~~~IGLILGTGtNacYiE~~~~i~kl~g-age~G~MiINtEwG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKm 332 (828)
.++.+.+++|||+|+|++.+++.+.+.++ ++|.|||. | .||..| |+|.+
T Consensus 145 ~~~~~~v~l~lGtGIG~givi~G~l~~G~~g~AGEiGH~~-~----~CG~~G-----------------------clE~~ 196 (366)
T 3mcp_A 145 KRYKNLLGVTLGTGFGAGVVIDGELLRGDNAAGGYVWCLR-N----KKYPEY-----------------------IVEES 196 (366)
T ss_dssp CCCCEEEEEEESSSEEEEEEETTEECCCTTSCTTCCTTSB-C----SSCTTS-----------------------BGGGT
T ss_pred CCCCcEEEEEECCcceEEEEECCEEecCCCCCCceeeccc-C----CCCCCc-----------------------ceeee
Confidence 57899999999999999999999888888 89999999 5 677777 58999
Q ss_pred hccccHHHHHHHHHHHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHH---H
Q psy4666 333 VSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCI---D 409 (828)
Q Consensus 333 vSG~YLGELvRliLl~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~---~ 409 (828)
+||..|.+..+... .. ...++. ++++ +.+. .
T Consensus 197 ~S~~al~~~~~~~~----~~--------------~~~~~~-----------------~~i~-----------~~a~~~~~ 230 (366)
T 3mcp_A 197 VSIRAVMRVYAERS----GD--------------AGARTP-----------------KEIF-----------EIAEGIRP 230 (366)
T ss_dssp SSHHHHHHHHHHHS----SC--------------CSCCCH-----------------HHHH-----------HHHHTSSC
T ss_pred ecHHHHHHHHHHhh----CC--------------CCCCCH-----------------HHHH-----------HHHhhhhc
Confidence 99999977655421 00 011222 2333 2333 4
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhc
Q psy4666 410 VR-YLCRVVSQRSAHLASAGIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALI 468 (828)
Q Consensus 410 vr-~Ic~aV~~RAA~LlAAgLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~ 468 (828)
++ ..|..+++++++++|.+|+++++.++| .|+|| |++....+.|.+.+++.+++.+
T Consensus 231 gD~~~a~~~l~~~~~~Lg~~i~nl~~~ldP-~IviG--Ggi~~~~~~~~~~l~~~l~~~~ 287 (366)
T 3mcp_A 231 GNREAAIAAFEELGEMAGDALASAITLIDG-LIVIG--GGLSGASKYILPVLLKEMNAQT 287 (366)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHCS-EEEEE--SGGGGGHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-EEEEE--ChhhhchHHHHHHHHHHHHHhc
Confidence 56 888999999999999999999999999 99999 9999999999999999998875
No 20
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=99.89 E-value=2.7e-22 Score=212.16 Aligned_cols=254 Identities=19% Similarity=0.224 Sum_probs=193.8
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc--cc
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP--VD 116 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP--v~ 116 (828)
.+|+||+|||++|+++++ ++ .. ...+++.|.. . ++++++.|.+.+.+++++.. .+ ..|+++|.| ++
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~~-~l--~~~~~~~~~~--~--~~~~~~~i~~~i~~~~~~~~--~~--i~gigi~~pG~vd 70 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGKR-LL--SKVVVPTPKE--G--GERVAEALAEAAERAEREAG--VR--GEAIGLGTPGPLD 70 (302)
T ss_dssp CEEEEEECSSEEEEEEECSSS-BS--CCEEEECCSS--C--HHHHHHHHHHHHHHHHHHHT--CC--CSSEEEEESSCEE
T ss_pred EEEEEEEcCCEEEEEEEeCCC-cE--EEEEEcCCCC--C--hHHHHHHHHHHHHHHHhhcc--CC--ceEEEEEecccEe
Confidence 368999999999999999 63 32 3444555542 2 37899999999999887652 12 255555555 54
Q ss_pred ccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccCccc
Q psy4666 117 MMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSSTT 196 (828)
Q Consensus 117 q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 196 (828)
.. + |++
T Consensus 71 ~~---~-----------------------------g~v------------------------------------------ 76 (302)
T 3vov_A 71 FR---R-----------------------------GVI------------------------------------------ 76 (302)
T ss_dssp TT---T-----------------------------TEE------------------------------------------
T ss_pred CC---C-----------------------------CEE------------------------------------------
Confidence 33 2 444
Q ss_pred cccceee-ccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccC----CCCcEEEEEEcccccce
Q psy4666 197 ISKCVLV-RWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIGVIVGTGFNAC 271 (828)
Q Consensus 197 i~~~~n~-~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~----~~~~~IGLILGTGtNac 271 (828)
..++|+ .|. +.|+.+.|++.+ + +| |.+.||++++++++.+. +.++.+.+++|||++++
T Consensus 77 -~~~~~~~~w~---------~~~l~~~l~~~~---~-~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG~g 139 (302)
T 3vov_A 77 -RFAPNIPGVQ---------DFPIRRILEEAT---G-RP---VFLENDANAAALAEHHLGAAQGEESSLYLTVSTGIGGG 139 (302)
T ss_dssp -C---CCTTCT---------TCCHHHHHHHHH---S-SC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEEE
T ss_pred -EcCCCCCCcC---------CCChHHHHHHhh---C-CC---EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCceeEE
Confidence 334566 783 356999999987 4 66 59999999999999764 56899999999999999
Q ss_pred eeccccccccCCC-CCCCCcEEEec--CCCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHHHH
Q psy4666 272 YVERTENVSTFEN-EANKPFVVINT--EWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEK 348 (828)
Q Consensus 272 YiE~~~~i~kl~g-age~G~MiINt--EwG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl~ 348 (828)
++.+++.+.+.++ ++|.|||.++. +.+.||..| |+|.++||..|-+.++...
T Consensus 140 ii~~g~l~~G~~g~aGEiGh~~v~~~g~~c~cg~~g-----------------------clE~~~s~~~l~~~~~~~~-- 194 (302)
T 3vov_A 140 VVLGGRVLRGERGQGGELGHLTLLPGGPACGCGLEG-----------------------CLEALAAGRALERDATYAF-- 194 (302)
T ss_dssp EEETTEECCCTTSCTTCGGGSBSSTTCCBCTTSCBS-----------------------BHHHHHSHHHHHHHHHHHH--
T ss_pred EEECCEEeeCCCCCCccccceEecCCCCCCCCCCcc-----------------------hHHHHhCHHHHHHHHHHhh--
Confidence 9999998888887 89999999974 446688777 6999999999866554321
Q ss_pred HhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4666 349 FTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASAG 428 (828)
Q Consensus 349 l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAg 428 (828)
.. .++ .+.++ +.++.++..|..+++++++++|.+
T Consensus 195 --~~----------------~~~-----------------~~~i~-----------~~a~~gd~~a~~~~~~~~~~l~~~ 228 (302)
T 3vov_A 195 --QR----------------PVD-----------------TRELF-----------RLFQAGDPKAERLVLQAARYVGIG 228 (302)
T ss_dssp --TS----------------CCC-----------------HHHHH-----------HHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred --CC----------------CCC-----------------HHHHH-----------HHHHcCCHHHHHHHHHHHHHHHHH
Confidence 00 011 23344 445667788999999999999999
Q ss_pred HHHHHhhcCCCeEEEEEcCcee-ecchhHHHHHHHHHHhhc
Q psy4666 429 IATLLNRMDFSIVTVGVDGSVY-RYHPYFHHMMLEKIPALI 468 (828)
Q Consensus 429 LAAIl~~l~~~~ItVGvDGSVy-~~~p~f~~~L~e~lreL~ 468 (828)
|+++++.++|+.|+|| |++. ...|.|.+.+++.+++..
T Consensus 229 i~~l~~~~~p~~ivlg--G~i~~~~~~~l~~~l~~~l~~~~ 267 (302)
T 3vov_A 229 LASLVKAFDPGVVVLG--GGVALNAPEGYWEALLEAYRRYL 267 (302)
T ss_dssp HHHHHHHHCCSEEEEE--SHHHHTSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCEEEEe--ChhHhhhhHHHHHHHHHHHHHhc
Confidence 9999999999999999 9999 888999999999998875
No 21
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=99.89 E-value=6e-22 Score=211.69 Aligned_cols=269 Identities=20% Similarity=0.230 Sum_probs=195.2
Q ss_pred ccEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc--c
Q psy4666 39 GKFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP--V 115 (828)
Q Consensus 39 G~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP--v 115 (828)
..+|+||+|||++|+++++ +|+... ...++.|. +.+++++.+.+.+.+++.+....... .+|+++|.| +
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~G~il~--~~~~~~~~-----~~~~~~~~i~~~i~~~~~~~~~~~~~-i~gigi~~pG~v 101 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMKGEIVK--KYTQFNPK-----TYEERINLILQMCVEAAAEAVKLNCR-ILGVGISTGGRV 101 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEE--EEEEECCS-----SHHHHHHHHHHHHHHHHHHHHHTTEE-EEEEEEEESSEE
T ss_pred cEEEEEEECCCEEEEEEECCCCcEEE--EEEEcCCC-----CHHHHHHHHHHHHHHHHHhcccccCc-eEEEEEecccCE
Confidence 4678999999999999999 887532 33444442 35678899999999998775433222 367777776 4
Q ss_pred cccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccCcc
Q psy4666 116 DMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSST 195 (828)
Q Consensus 116 ~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 195 (828)
+.. + |++
T Consensus 102 d~~---~-----------------------------g~v----------------------------------------- 108 (343)
T 2yhw_A 102 NPR---E-----------------------------GIV----------------------------------------- 108 (343)
T ss_dssp ETT---T-----------------------------TEE-----------------------------------------
T ss_pred eCC---C-----------------------------CEE-----------------------------------------
Confidence 433 2 444
Q ss_pred ccccceee--ccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccC----CCCcEEEEEEccccc
Q psy4666 196 TISKCVLV--RWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIGVIVGTGFN 269 (828)
Q Consensus 196 ~i~~~~n~--~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~----~~~~~IGLILGTGtN 269 (828)
..++++ .|. +.|+.+.|++.+ + +| |.|.||++++++++.+. +.++.+.+++|||++
T Consensus 109 --~~~~~~~~~w~---------~~~l~~~l~~~~---~-~p---v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtGiG 170 (343)
T 2yhw_A 109 --LHSTKLIQEWN---------SVDLRTPLSDTL---H-LP---VWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIG 170 (343)
T ss_dssp --EECCTTSSSCS---------SEECHHHHHHHH---C-SC---EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSSEE
T ss_pred --EeCCcCCCCCc---------CCCHHHHHHHHH---C-CC---EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCCEE
Confidence 223334 673 357889999977 4 66 59999999999999765 457899999999999
Q ss_pred ceeeccccccccCCC-CCCCCcEEEec--CCCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHH
Q psy4666 270 ACYVERTENVSTFEN-EANKPFVVINT--EWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMM 346 (828)
Q Consensus 270 acYiE~~~~i~kl~g-age~G~MiINt--EwG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliL 346 (828)
++++.+++.+.+.++ ++|.|||.++. ..+.||..| |+|.++|+..|-+.++...
T Consensus 171 ~gii~~G~l~~G~~g~aGEiGh~~~~~~g~~c~cG~~g-----------------------clE~~~s~~al~~~~~~~~ 227 (343)
T 2yhw_A 171 GGIIHQHELIHGSSFCAAELGHLVVSLXGPDCSCGSHG-----------------------CIEAYASGMALQREAKKLH 227 (343)
T ss_dssp EEEEETTEECCCTTSCTTCGGGCBCCC--CBCTTSCBS-----------------------BHHHHHSHHHHHHHHHHHH
T ss_pred EEEEECCEEecCCCCcccccCCEEEccCCCcCCCCCCC-----------------------cHHHhcCHHHHHHHHHHhh
Confidence 999999998888777 89999999974 345677776 6999999999977665432
Q ss_pred HHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy4666 347 EKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLAS 426 (828)
Q Consensus 347 l~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlA 426 (828)
. .... .+.. ..... . ... .++.++ +.++.++..|..+++++++++|
T Consensus 228 ~----~~~~-------~~~~-~~~~~--------~--~~~-~~~~v~-----------~~a~~gd~~a~~il~~~~~~La 273 (343)
T 2yhw_A 228 D----EDLL-------LVEG-MSVPK--------D--EAV-GALHLI-----------QAAKLGNAKAQSILRTAGTALG 273 (343)
T ss_dssp H----TTCS-------CCTT-CCC--------------CC-CHHHHH-----------HHHHTTCHHHHHHHHHHHHHHH
T ss_pred c----cccc-------cccc-ccccc--------c--ccC-CHHHHH-----------HHHHcCCHHHHHHHHHHHHHHH
Confidence 1 1110 0000 00000 0 000 234455 5567788999999999999999
Q ss_pred HHHHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhc
Q psy4666 427 AGIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALI 468 (828)
Q Consensus 427 AgLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~ 468 (828)
.+|+++++.++|+.|+|| |++. +.|.+.+++.+++..
T Consensus 274 ~~i~~l~~~l~P~~Ivlg--G~i~---~~~~~~l~~~l~~~~ 310 (343)
T 2yhw_A 274 LGVVNILHTMNPSLVILS--GVLA---SHYIHIVKDVIRQQA 310 (343)
T ss_dssp HHHHHHHHHTCCSEEEEE--STTH---HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCEEEEe--CCcH---HHHHHHHHHHHHHhc
Confidence 999999999999999998 9986 578888888887753
No 22
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=99.88 E-value=4.8e-22 Score=211.44 Aligned_cols=264 Identities=14% Similarity=0.157 Sum_probs=193.0
Q ss_pred ccccEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc-
Q psy4666 37 ETGKFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP- 114 (828)
Q Consensus 37 E~G~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP- 114 (828)
..+.+|+||+|||++|+++++ +|+... ..+++.|.. .+.+++++.|.+.+.++++. ... ..|+++|.|
T Consensus 17 ~~~~~lgidiggt~i~~~l~d~~g~il~--~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~----~~~-i~gigi~~pG 86 (321)
T 3r8e_A 17 FQGMILGIDVGGTSVKFGLVTPEGEIQN--ATRFMTADW---VNGIGFVESMKLEIGNFLKQ----YPI-VKGVGIGWPG 86 (321)
T ss_dssp --CCEEEEECCSSEEEEEEECTTCCEEE--EEEEEHHHH---HTTTCHHHHHHHHHHHHHHH----CTT-CCEEEEEESS
T ss_pred cCcEEEEEEECCCEEEEEEEcCCCcEEE--EEEEeCCCC---CCHHHHHHHHHHHHHHHHhc----cCC-eeEEEEEecc
Confidence 345789999999999999999 887522 334554421 24678999999999998861 112 356666666
Q ss_pred -ccccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccC
Q psy4666 115 -VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSS 193 (828)
Q Consensus 115 -v~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 193 (828)
++.. + |++
T Consensus 87 ~vd~~---~-----------------------------g~v--------------------------------------- 95 (321)
T 3r8e_A 87 LVSLD---R-----------------------------TKV--------------------------------------- 95 (321)
T ss_dssp EECTT---S-----------------------------CCE---------------------------------------
T ss_pred cEECC---C-----------------------------CEE---------------------------------------
Confidence 4422 2 444
Q ss_pred ccccccceeec-cccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccC----CCCcEEEEEEcccc
Q psy4666 194 STTISKCVLVR-WTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIGVIVGTGF 268 (828)
Q Consensus 194 ~~~i~~~~n~~-WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~----~~~~~IGLILGTGt 268 (828)
..++|+. |. + .|+.+.|++.+. .+| |.|.||++++++++.+. +.++.+.+++|||+
T Consensus 96 ----~~~~~l~~w~-~--------~~l~~~l~~~~~---~~p---V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGi 156 (321)
T 3r8e_A 96 ----ILLPNIPSVV-N--------VPIVEILRSEFP---HIH---FKIENDAKCAALGEYYFGENKRMQTFILLALGTGV 156 (321)
T ss_dssp ----EEBTTBCCCC-S--------CCHHHHHHHHCT---TSE---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE
T ss_pred ----EeCCCCcccc-C--------CCHHHHHHHHcC---CCC---EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCce
Confidence 3345675 83 3 568888887541 244 69999999999999764 56899999999999
Q ss_pred cceeeccccccccCCC-CCCCCcEEEecCCCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHHH
Q psy4666 269 NACYVERTENVSTFEN-EANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMME 347 (828)
Q Consensus 269 NacYiE~~~~i~kl~g-age~G~MiINtEwG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl 347 (828)
+++++.+++.+.+.++ ++|.|||. +.+ .| |+|.++|+.+|-+.++....
T Consensus 157 G~gii~~G~l~~G~~g~aGEiGh~~-~~~------~g-----------------------clE~~~S~~al~~~~~~~~~ 206 (321)
T 3r8e_A 157 GSGVMMNGKLFIGGRGNGTEVGHML-TTR------GK-----------------------SLENQVGINHLIAYTHEQLA 206 (321)
T ss_dssp EEEEEETTEECCCTTSCCCCGGGCB-CTT------SS-----------------------BSHHHHSHHHHHHHHHHHHH
T ss_pred EEEEEECCEEecCCCCCCccccccc-CCC------CC-----------------------cHHHhcCHHHHHHHHHHHhh
Confidence 9999999998888887 88999988 543 44 69999999999777665432
Q ss_pred HHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4666 348 KFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASA 427 (828)
Q Consensus 348 ~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAA 427 (828)
.-... .+ .+.....+ ..+.++ +.++.++..|..+++++++++|.
T Consensus 207 ~~~~~-~~-------~~~~~~~~-----------------~~~~i~-----------~~a~~gD~~a~~~~~~~~~~La~ 250 (321)
T 3r8e_A 207 LDVAK-KS-------SLHTIAEL-----------------SPKVIA-----------DHAAQGDALALAVWADIGTIIGE 250 (321)
T ss_dssp HCTTC-CC-------SGGGCSSC-----------------CHHHHH-----------HHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ccCcc-cc-------cccccccC-----------------CHHHHH-----------HHHHcCCHHHHHHHHHHHHHHHH
Confidence 11000 00 00000011 234444 55567789999999999999999
Q ss_pred HHHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhc
Q psy4666 428 GIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALI 468 (828)
Q Consensus 428 gLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~ 468 (828)
+|+++++.++|+.|+|| |++.+..+.|.+.+++.+++..
T Consensus 251 ~i~~l~~~ldP~~Ivlg--G~i~~~~~~l~~~l~~~l~~~~ 289 (321)
T 3r8e_A 251 SLVNIVRVMDLNNILLG--GGISGAFDYFVPNLKKAMLEHL 289 (321)
T ss_dssp HHHHHHHHHCCCEEEEE--SGGGGGHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCEEEEe--ChhcccchHHHHHHHHHHHHhc
Confidence 99999999999999999 9999989999999999998875
No 23
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=99.88 E-value=9.7e-22 Score=208.49 Aligned_cols=252 Identities=16% Similarity=0.209 Sum_probs=186.2
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc--cc
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP--VD 116 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP--v~ 116 (828)
.+|+||+|||++|+++++ +|+. +...+++.|.. +.+++++.|.+.+.++..+.+. ..|+++|.| ++
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~g~i--l~~~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~-----i~~igi~~pG~vd 93 (327)
T 2ap1_A 25 MYYGFDIGGTKIALGVFDSTRRL--QWEKRVPTPHT----SYSAFLDAVCELVEEADQRFGV-----KGSVGIGIPGMPE 93 (327)
T ss_dssp EEEEEEECSSEEEEEEEETTCCE--EEEEEEECCCS----CHHHHHHHHHHHHHHHHHHHTS-----CCEEEEEESSBSC
T ss_pred eEEEEEECCCEEEEEEEeCCCCE--EEEEEecCCCC----CHHHHHHHHHHHHHHHHHhcCC-----ccEEEEEeeeeEE
Confidence 589999999999999999 8875 23445555532 3567889999988887765431 345666665 44
Q ss_pred ccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccCccc
Q psy4666 117 MMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSSTT 196 (828)
Q Consensus 117 q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 196 (828)
.. + |++
T Consensus 94 ~~---~-----------------------------g~v------------------------------------------ 99 (327)
T 2ap1_A 94 TE---D-----------------------------GTL------------------------------------------ 99 (327)
T ss_dssp CT---T-----------------------------SCC------------------------------------------
T ss_pred CC---C-----------------------------CEE------------------------------------------
Confidence 33 1 333
Q ss_pred cccceee-ccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccC----CCCcEEEEEEcccccce
Q psy4666 197 ISKCVLV-RWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIGVIVGTGFNAC 271 (828)
Q Consensus 197 i~~~~n~-~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~----~~~~~IGLILGTGtNac 271 (828)
.. +++ .| .+.|+.+.|++.+ + +| |.|.||++++++++.+. +.++.+.+++|||++++
T Consensus 100 -~~-~~~~~~---------~~~~l~~~l~~~~---~-~p---v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtGiG~g 161 (327)
T 2ap1_A 100 -YA-ANVPAA---------SGKPLRADLSARL---D-RD---VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGG 161 (327)
T ss_dssp -BC-TTCTTT---------TTSCHHHHHHHHH---T-SC---EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSSEEEE
T ss_pred -Ec-cCCCcc---------CCCChHHHHHHHH---C-CC---EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCcEEEE
Confidence 11 123 23 2467999999987 4 66 59999999999999876 35789999999999999
Q ss_pred eeccccccccCCC-CCCCCcEEEecC------------CCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccH
Q psy4666 272 YVERTENVSTFEN-EANKPFVVINTE------------WGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYM 338 (828)
Q Consensus 272 YiE~~~~i~kl~g-age~G~MiINtE------------wG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YL 338 (828)
++.+++.+.+.++ ++|.|||.++.. .+.||..| |+|.++|+..|
T Consensus 162 iv~~G~l~~G~~g~aGE~Gh~~~~~~~~~~~~~~~~g~~c~cG~~g-----------------------cle~~~s~~~l 218 (327)
T 2ap1_A 162 LVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDFPLRRCGCGQMG-----------------------CIENYLSGRGF 218 (327)
T ss_dssp EEETTEEECCTTSCTTCGGGSBCCHHHHHHHCTTSCCCBCTTSCBS-----------------------BTHHHHSHHHH
T ss_pred EEECCEEeecCCCcccccccEEEecCcccccccccCCCcCCCCchh-----------------------hHHHHhCHHHH
Confidence 9999998888877 899999999743 44567666 68999999988
Q ss_pred HHHHHHHHHHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHH
Q psy4666 339 GEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVS 418 (828)
Q Consensus 339 GELvRliLl~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~ 418 (828)
-+.++... +. .. .++.++ +.++.++..|..++
T Consensus 219 ~~~~~~~~-----------~~---------~~-----------------~~~~i~-----------~~a~~gd~~a~~il 250 (327)
T 2ap1_A 219 AWLYQHYY-----------DQ---------SL-----------------QAPEII-----------ALWEQGDEQAHAHV 250 (327)
T ss_dssp HHHHHHHH-----------CC---------CC-----------------CHHHHH-----------HHHHTTCHHHHHHH
T ss_pred HHHHHHhc-----------CC---------CC-----------------CHHHHH-----------HHHHcCCHHHHHHH
Confidence 65444311 00 00 123344 44566778899999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhc
Q psy4666 419 QRSAHLASAGIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALI 468 (828)
Q Consensus 419 ~RAA~LlAAgLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~ 468 (828)
+++++++|.+++++++.++|+.|++| |++....+.|.+ +++.+++..
T Consensus 251 ~~~~~~La~~i~~l~~~l~p~~Ivlg--G~i~~~~~~~~~-l~~~l~~~~ 297 (327)
T 2ap1_A 251 ERYLDLLAVCLGNILTIVDPDLLVIG--GGLSNFTAITTQ-LAERLPRHL 297 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEE--SGGGGSTHHHHS-SGGGSGGGS
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEe--ChhhcchhHHHH-HHHHHHHhh
Confidence 99999999999999999999998888 999987665554 777776654
No 24
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=99.88 E-value=2.3e-21 Score=204.34 Aligned_cols=252 Identities=18% Similarity=0.236 Sum_probs=183.6
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc--cc
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP--VD 116 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP--v~ 116 (828)
.++++|+|||++|+++++ +|+.. ...++++|.. +.+++++.+.+ ++.+. .. ..|+++|.| ++
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~il--~~~~~~~~~~----~~~~~~~~i~~----~~~~~----~~-i~gigi~~pG~vd 69 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGEII--LTKSAEISGS----DGDQILAEMKV----FLAEN----TD-VTGIAVSAPGYVN 69 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEE--EEEEEECSTT----CHHHHHHHHHH----HHHTC----TT-CCEEEEEESSEEC
T ss_pred EEEEEEeCCCeEEEEEECCCCCEE--EEEEecCCCC----CHHHHHHHHHH----HHhhc----CC-eeEEEEecCccee
Confidence 589999999999999999 88753 2344555431 23455555544 44432 12 367777766 54
Q ss_pred ccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccCccc
Q psy4666 117 MMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSSTT 196 (828)
Q Consensus 117 q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 196 (828)
.. + |++
T Consensus 70 ~~---~-----------------------------g~v------------------------------------------ 75 (297)
T 4htl_A 70 PK---T-----------------------------GLI------------------------------------------ 75 (297)
T ss_dssp TT---T-----------------------------CEE------------------------------------------
T ss_pred CC---C-----------------------------CEE------------------------------------------
Confidence 33 2 554
Q ss_pred cccceee-ccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccC----CCCcEEEEEEcccccce
Q psy4666 197 ISKCVLV-RWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIGVIVGTGFNAC 271 (828)
Q Consensus 197 i~~~~n~-~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~----~~~~~IGLILGTGtNac 271 (828)
..++++ .| + +.|+.+.|++.+ + +| |.+.||++++++++.+. +.++.+.+++|||++++
T Consensus 76 -~~~~~l~~w-~--------~~~l~~~l~~~~---~-~p---V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG~g 138 (297)
T 4htl_A 76 -TMGGAIRRF-D--------NFNLKEWLEAET---G-LP---VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGG 138 (297)
T ss_dssp -EECTTCGGG-T--------TEEHHHHHHHHH---C-SC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEE
T ss_pred -EeCCCCCCc-c--------CCCHHHHHHHHH---C-cC---EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcceEEE
Confidence 233455 57 3 357999999977 4 66 59999999999999764 57899999999999999
Q ss_pred eeccccccccCCC-CCCCCcEEEecCCCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHHHHHh
Q psy4666 272 YVERTENVSTFEN-EANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFT 350 (828)
Q Consensus 272 YiE~~~~i~kl~g-age~G~MiINtEwG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl~l~ 350 (828)
++.+++.+.+.++ ++|.|||.++..-+. .+|..|+|.++|+..|-+..+...
T Consensus 139 iv~~G~l~~G~~g~aGEiGh~~~~~~~~~-----------------------~~~~~~le~~~s~~~l~~~~~~~~---- 191 (297)
T 4htl_A 139 IFSNGELVRGGRFRAGEFGYMFSERPGAF-----------------------RPGKYTLNETTTMLVLRRQYAELT---- 191 (297)
T ss_dssp EEETTEECCCTTSCCCCGGGSBSSCCCSS-----------------------CGGGGBHHHHSSHHHHHHHHHHHH----
T ss_pred EEECCEEEecCCCCcccccceEecCCCCc-----------------------CcccCcHHHhccHHHHHHHHHHHh----
Confidence 9999998888888 899999998643211 124458999999999866554321
Q ss_pred hcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4666 351 EEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASAGIA 430 (828)
Q Consensus 351 ~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLA 430 (828)
+. +. ..+ ..+.++ +.++.++..|..+++++++++|.+|+
T Consensus 192 --~~------~~-----~~~-----------------~~~~i~-----------~~a~~gd~~a~~~~~~~~~~La~~i~ 230 (297)
T 4htl_A 192 --GR------PL-----EEI-----------------TGEEIF-----------ANYDAHDAVSERLITEFYTGICTGLY 230 (297)
T ss_dssp --CC------CG-----GGC-----------------CHHHHH-----------HHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred --cC------Cc-----cCC-----------------CHHHHH-----------HHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 10 00 001 123444 45567788999999999999999999
Q ss_pred HHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhc
Q psy4666 431 TLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALI 468 (828)
Q Consensus 431 AIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~ 468 (828)
++++.++|+.|+|| |++.+. +.|.+.+++.+++..
T Consensus 231 ~l~~~~~p~~Ivlg--Ggi~~~-~~~~~~l~~~l~~~~ 265 (297)
T 4htl_A 231 NLIYLFDPTHIFIG--GGITSR-PTFIAELKHHMESFG 265 (297)
T ss_dssp HHHHHHCCSEEEEE--SGGGGS-TTHHHHHHHHHTTTC
T ss_pred HHHHHhCCCEEEEe--Cccccc-HHHHHHHHHHHHHhc
Confidence 99999999999999 999985 778999999998765
No 25
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=99.87 E-value=1e-21 Score=204.36 Aligned_cols=250 Identities=16% Similarity=0.111 Sum_probs=183.0
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc--cc
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP--VD 116 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP--v~ 116 (828)
.+|+||+|||++|+++++ +|+.. ...+++.+.. . +.+++++.|.+.+.+++.+. .|+++|.| ++
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~il--~~~~~~~~~~--~-~~~~~~~~i~~~i~~~~~~~--------~~igi~~pG~vd 68 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQIR--DRRELPTPAS--Q-TPEALRDALSALVSPLQAHA--------QRVAIASTGIIR 68 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEE--EEEEEECCSS--C-CHHHHHHHHHHHHTTTGGGC--------SEEEEEESSEEE
T ss_pred eEEEEEeCCCEEEEEEECCCCCEE--EEEEecCCCC--C-CHHHHHHHHHHHHHHHHhhC--------CEEEEEecccee
Confidence 378999999999999999 88752 2344555432 1 35678888888777665431 13444444 43
Q ss_pred ccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccCccc
Q psy4666 117 MMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSSTT 196 (828)
Q Consensus 117 q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 196 (828)
.. + |++
T Consensus 69 ~~---~-----------------------------g~v------------------------------------------ 74 (289)
T 2aa4_A 69 DG---S-----------------------------LLA------------------------------------------ 74 (289)
T ss_dssp TT---E-----------------------------EEC------------------------------------------
T ss_pred CC---C-----------------------------CEE------------------------------------------
Confidence 32 1 333
Q ss_pred cccceee-ccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccCCCC---cEEEEEEccccccee
Q psy4666 197 ISKCVLV-RWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHKH---CKIGVIVGTGFNACY 272 (828)
Q Consensus 197 i~~~~n~-~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~~~~---~~IGLILGTGtNacY 272 (828)
..++++ .|. + .|+.+.|++.+ + +| |.+.||++++++++.+.+.. +.+.+++|||+++++
T Consensus 75 -~~~~~~~~w~-~--------~~l~~~l~~~~---~-~p---v~v~NDa~aaa~~e~~~g~~~~~~~v~l~~GtGiG~gi 137 (289)
T 2aa4_A 75 -LNPHNLGGLL-H--------FPLVKTLEQLT---N-LP---TIAINDAQAAAWAEFQALDGDITDMVFITVSTGVGGGV 137 (289)
T ss_dssp -SSGGGGGGGT-T--------CCHHHHHHHHH---C-SC---EEEEEHHHHHHHHHHHTSCTTCCCEEEEEESSSEEEEE
T ss_pred -EeCCCCCccc-C--------CChHHHHHHHH---C-CC---EEEechHHHHHHHHHHhCCCCCceEEEEEeCccEEEEE
Confidence 334556 483 3 56899999977 4 66 59999999999999776421 899999999999999
Q ss_pred eccccccccCCC-CCCCCcEEEecCC--CccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHHHHH
Q psy4666 273 VERTENVSTFEN-EANKPFVVINTEW--GAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKF 349 (828)
Q Consensus 273 iE~~~~i~kl~g-age~G~MiINtEw--G~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl~l 349 (828)
+.+++.+.+.++ ++|.|||.++... +.||..| |+|.++|+..|-+.++.
T Consensus 138 i~~G~l~~G~~g~aGE~Gh~~~~~~g~~c~cG~~g-----------------------cle~~~s~~~l~~~~~~----- 189 (289)
T 2aa4_A 138 VSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTG-----------------------CVEAIASGRGIAAAAQG----- 189 (289)
T ss_dssp EETTEEECCTTSCCCCGGGSBSCTTSCBCTTSCBS-----------------------BHHHHHSHHHHHHTCCG-----
T ss_pred EECCEEeeCCCCCCccCCcEEECCCCCcCCCCCch-----------------------hHHHHhCHHHHHHHHHH-----
Confidence 999998888887 8999999997543 4567666 69999999776322110
Q ss_pred hhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4666 350 TEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASAGI 429 (828)
Q Consensus 350 ~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgL 429 (828)
. + + .. ..+.++ +.++.++..|..+++++++.+|.++
T Consensus 190 -----~--~---~------~~-----------------~~~~v~-----------~~a~~gd~~a~~i~~~~~~~L~~~i 225 (289)
T 2aa4_A 190 -----E--L---A------GA-----------------DAKTIF-----------TRAGQGDEQAQQLIHRSARTLARLI 225 (289)
T ss_dssp -----G--G---T------TC-----------------CHHHHH-----------HHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred -----h--c---c------CC-----------------CHHHHH-----------HHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 0 0 0 00 123444 4456678899999999999999999
Q ss_pred HHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhc
Q psy4666 430 ATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALI 468 (828)
Q Consensus 430 AAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~ 468 (828)
+++++.++|+.|+|| |++. ..+.|.+.+++.+++..
T Consensus 226 ~~l~~~l~p~~ivlg--G~~~-~~~~~~~~l~~~l~~~~ 261 (289)
T 2aa4_A 226 ADIKATTDCQCVVVG--GSVG-LAEGYLALVETYLAQEP 261 (289)
T ss_dssp HHHHHHHCCSEEEEE--HHHH-TSTTHHHHHHHHHTTSC
T ss_pred HHHHHhcCCCEEEEe--Cccc-ccHHHHHHHHHHHHHhc
Confidence 999999999998888 9998 67899999999988753
No 26
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=99.86 E-value=6e-22 Score=210.67 Aligned_cols=255 Identities=16% Similarity=0.185 Sum_probs=165.0
Q ss_pred ccccEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc-
Q psy4666 37 ETGKFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP- 114 (828)
Q Consensus 37 E~G~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP- 114 (828)
+.+.+++||+|||++|+++++ +|+... ..+++.|+. ..+++++.|.+.+.+++.+.+. . ..|+++|.|
T Consensus 5 ~~~~~lgiDiGgt~i~~~l~d~~G~il~--~~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~---~-i~gigi~~pG 74 (310)
T 3htv_A 5 QHNVVAGVDMGATHIRFCLRTAEGETLH--CEKKRTAEV----IAPGLVSGIGEMIDEQLRRFNA---R-CHGLVMGFPA 74 (310)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSCEEE--EEEEEHHHH----HTTCHHHHHHHHHHHHHHHHTE---E-EEEEEEEESS
T ss_pred CCCEEEEEEeCCCEEEEEEECCCCCEEE--EEEecCccc----cHHHHHHHHHHHHHHHHHhcCC---C-eeEEEEeccc
Confidence 345688999999999999999 887532 333444321 2457889999988888776542 1 367777776
Q ss_pred -ccccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccC
Q psy4666 115 -VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSS 193 (828)
Q Consensus 115 -v~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 193 (828)
++.. + |++
T Consensus 75 ~vd~~---~-----------------------------g~v--------------------------------------- 83 (310)
T 3htv_A 75 LVSKD---K-----------------------------RTI--------------------------------------- 83 (310)
T ss_dssp CBCTT---S-----------------------------SCB---------------------------------------
T ss_pred cEeCC---C-----------------------------CEE---------------------------------------
Confidence 4432 2 333
Q ss_pred ccccccceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhccc---CCCCcEEEEEEcccccc
Q psy4666 194 STTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAY---DHKHCKIGVIVGTGFNA 270 (828)
Q Consensus 194 ~~~i~~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay---~~~~~~IGLILGTGtNa 270 (828)
..++|+.|... -+.|+.+.|++.+ + +| |.+.||++++++++.+ .+.++.+.+++|||+++
T Consensus 84 ----~~~~~l~~~~~------~~~~l~~~l~~~~---~-~p---v~v~NDanaaa~~e~~~~~~~~~~~~~v~~GtGiG~ 146 (310)
T 3htv_A 84 ----ISTPNLPLTAA------DLYDLADKLENTL---N-CP---VEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMGF 146 (310)
T ss_dssp ----CSCCSSSCCHH------HHTTHHHHHHHHH---T-SC---EEEEEHHHHHHHHHHHHTTCTTSCEEEEEESSSEEE
T ss_pred ----EeCCCCCCccc------cCccHHHHHHHHh---C-CC---EEEeeHHHHHHHHHHhhcccCCceEEEEEeceeEEE
Confidence 44567888421 0246888999877 4 66 5999999999987633 35678999999999999
Q ss_pred eeeccccccccCCC-CCCCCcEEEec--CCCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHHH
Q psy4666 271 CYVERTENVSTFEN-EANKPFVVINT--EWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMME 347 (828)
Q Consensus 271 cYiE~~~~i~kl~g-age~G~MiINt--EwG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl 347 (828)
+++.+++.+.+.++ ++|.|||.++. ..|.||..| |+|.++||..|-+..+.
T Consensus 147 gii~~G~l~~G~~g~aGEiGh~~v~~~g~~C~cG~~G-----------------------clE~~~S~~al~~~~~~--- 200 (310)
T 3htv_A 147 AVWMNGAPWTGAHGVAGELGHIPLGDMTQHCACGNPG-----------------------CLETNCSGMALRRWYEQ--- 200 (310)
T ss_dssp EEEETTEEECCSSSCCCC--------------------------------------------CCSSSHHHHHHHHTT---
T ss_pred EEEECCEEeecCCCCceeCcceEeCCCCCcCCCCCCc-----------------------eehhhhCHHHHHHHHHh---
Confidence 99999999998888 89999999973 456688877 68999999988443211
Q ss_pred HHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4666 348 KFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASA 427 (828)
Q Consensus 348 ~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAA 427 (828)
.+ ..++.+.+.+... .+.++..++++. |.
T Consensus 201 ----~~--------------~~~~~~~~~~~~~-----------------------------~d~~~~~~~~~~----a~ 229 (310)
T 3htv_A 201 ----QP--------------RNYPLRDLFVHAE-----------------------------NAPFVQSLLENA----AR 229 (310)
T ss_dssp ----SC--------------CSSCGGGHHHHHT-----------------------------TCHHHHHHHHHH----HH
T ss_pred ----cc--------------CCCCHHHHHHHHc-----------------------------CChHHHHHHHHH----HH
Confidence 00 0122222322211 123444444544 44
Q ss_pred HHHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhc
Q psy4666 428 GIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALI 468 (828)
Q Consensus 428 gLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~ 468 (828)
+|+++++.++|+.|+|| |++.+..+.+.+.+.+.+++.+
T Consensus 230 ~la~l~~~~dP~~Ivlg--G~v~~~~~~~~~~l~~~l~~~~ 268 (310)
T 3htv_A 230 AIATSINLFDPDAVILG--GGVMDMPAFPRETLVAMTQKYL 268 (310)
T ss_dssp HHHHHHHHHCCSEEEEE--CTTTTSTTCCHHHHHHHHHHTS
T ss_pred HHHHHHHhhCCCEEEEe--CchhccchhHHHHHHHHHHHHh
Confidence 78889999999999999 9999988888888888887764
No 27
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=99.84 E-value=4.3e-20 Score=192.64 Aligned_cols=168 Identities=17% Similarity=0.206 Sum_probs=130.9
Q ss_pred ccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhccc--CCCCcEEEEEEcccccceeeccccccccCCC-CCCCCcEEE
Q psy4666 217 ANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAY--DHKHCKIGVIVGTGFNACYVERTENVSTFEN-EANKPFVVI 293 (828)
Q Consensus 217 ~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay--~~~~~~IGLILGTGtNacYiE~~~~i~kl~g-age~G~MiI 293 (828)
.|+.+.| +.+ + +| |.+.||++++++++.+ .+.++.+.+++|||++++++.+++.+.+.++ ++|.|||.+
T Consensus 85 ~~l~~~l-~~~---~-~p---v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtGiG~giv~~G~l~~G~~g~aGEiGh~~~ 156 (292)
T 2gup_A 85 FSWYEAL-SSY---Q-LP---VHLENDANCVGLSELLAHPELENAACVVIGTGIGGAMIINGRLHRGRHGLGGEFGYMTT 156 (292)
T ss_dssp SBHHHHT-GGG---C-CC---EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSSEEEEEEETTEEECCTTSCTTCGGGCBS
T ss_pred CCHHHHH-HHc---C-CC---EEEechHHHHHHHHHHhcCCCCeEEEEEECCceEEEEEECCEEEecCCCCCccceeEEe
Confidence 4677777 654 3 55 5999999999999965 4678999999999999999999998888777 899999998
Q ss_pred ecCCCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHHHHHhhcCcccCCCCCccccccCccChh
Q psy4666 294 NTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTM 373 (828)
Q Consensus 294 NtEwG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl~l~~~glLF~g~~~~~L~~~~sfdT~ 373 (828)
+. |.| ..| |+|.++|+..|-+.++... +. + .++
T Consensus 157 ~~--~~~-~~g-----------------------cle~~~s~~~l~~~~~~~~------~~-------~------~~~-- 189 (292)
T 2gup_A 157 LA--PAE-KLN-----------------------NWSQLASTGNMVRYVIEKS------GH-------T------DWD-- 189 (292)
T ss_dssp SC--CSS-SCC-----------------------BHHHHHSHHHHHHHHHHHH------SS-------C------CCC--
T ss_pred cc--CCC-CCC-----------------------cHHHhcCHHHHHHHHHHhh------CC-------C------CCC--
Confidence 75 222 233 6999999988865443311 00 0 011
Q ss_pred HHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEcCceeecc
Q psy4666 374 YISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASAGIATLLNRMDFSIVTVGVDGSVYRYH 453 (828)
Q Consensus 374 ~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLAAIl~~l~~~~ItVGvDGSVy~~~ 453 (828)
.+.++ +.++.++..|..+++++++.+|.+|+++++.++|+.|++| |++. ..
T Consensus 190 ---------------~~~v~-----------~~a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~p~~Ivlg--G~i~-~~ 240 (292)
T 2gup_A 190 ---------------GRKIY-----------QEAAAGNILCQEAIERMNRNLAQGLLNIQYLIDPGVISLG--GSIS-QN 240 (292)
T ss_dssp ---------------HHHHH-----------HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEE--SGGG-GC
T ss_pred ---------------HHHHH-----------HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe--Cccc-cc
Confidence 23334 4456677889999999999999999999999999999998 9996 47
Q ss_pred hhHHHHHHHHHHhhc
Q psy4666 454 PYFHHMMLEKIPALI 468 (828)
Q Consensus 454 p~f~~~L~e~lreL~ 468 (828)
|.|.+.+++.+++..
T Consensus 241 ~~~~~~l~~~l~~~~ 255 (292)
T 2gup_A 241 PDFIQGVKKAVEDFV 255 (292)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhh
Confidence 899999999988764
No 28
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=99.84 E-value=2.8e-20 Score=198.70 Aligned_cols=171 Identities=12% Similarity=0.110 Sum_probs=127.0
Q ss_pred HHHHHHHHHhcCCCCccEEEEEechHHHHHhcccC--------------CCCcEEEEEEcccccceeeccccccccCCC-
Q psy4666 220 VELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD--------------HKHCKIGVIVGTGFNACYVERTENVSTFEN- 284 (828)
Q Consensus 220 v~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~--------------~~~~~IGLILGTGtNacYiE~~~~i~kl~g- 284 (828)
.+.|++.+ + +| .|.|.||++++++++.+. +.++.+.+++|||++++++.+++ .++++
T Consensus 94 ~~~l~~~~---~-~p--~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGiG~giv~~g~--~G~~g~ 165 (332)
T 1sz2_A 94 IAEMKKNL---G-FS--HLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVD--KRWVSL 165 (332)
T ss_dssp HHHHHHHH---T-CS--EEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSEEEEEEEEET--TEEEEE
T ss_pred HHHHHHHh---C-CC--cEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccceEEEEecCC--CCeeeC
Confidence 46777766 4 55 359999999999999764 45789999999999999999987 56655
Q ss_pred CCCCCcEEEecC-----------CCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHHHHHhhcC
Q psy4666 285 EANKPFVVINTE-----------WGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEG 353 (828)
Q Consensus 285 age~G~MiINtE-----------wG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl~l~~~g 353 (828)
++|.|||.++.. ++.|| .| |+|.++||..|.+.++..... .+
T Consensus 166 agE~GH~~v~~~~~~~~~l~~~~c~~~g-~g-----------------------clE~~~S~~~l~~~~~~~~~~---~~ 218 (332)
T 1sz2_A 166 PGEGGHVDFAPNSEEEAIILEILRAEIG-HV-----------------------SAERVLSGPGLVNLYRAIVKA---DN 218 (332)
T ss_dssp ECCGGGSBCCCCSHHHHHHHHHHHHHSS-SC-----------------------BGGGTSSHHHHHHHHHHHHHH---TT
T ss_pred CCCccccCcCCCChHHHHHHHHHHhccC-Cc-----------------------chhhhccHHHHHHHHHHHhhc---cC
Confidence 899999988643 22444 44 699999999998776653211 00
Q ss_pred cccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q psy4666 354 ILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDV-RYLCRVVSQRSAHLASAGIATL 432 (828)
Q Consensus 354 lLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~v-r~Ic~aV~~RAA~LlAAgLAAI 432 (828)
. . +... .++.++ +.++.+ +..|..+++++++++|.+|+++
T Consensus 219 ~-----~------~~~~-----------------~~~~i~-----------~~a~~G~D~~A~~~~~~~~~~Lg~~i~~l 259 (332)
T 1sz2_A 219 R-----L------PENL-----------------KPKDIT-----------ERALADSCTDCRRALSLFCVIMGRFGGNL 259 (332)
T ss_dssp C-----C------CCCC-----------------CHHHHH-----------HHHHHTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-----C------ccCC-----------------CHHHHH-----------HHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0011 234455 556778 8999999999999999999999
Q ss_pred HhhcCCCe-EEEEEcCceeec-chhHH-HHHHHHHHh
Q psy4666 433 LNRMDFSI-VTVGVDGSVYRY-HPYFH-HMMLEKIPA 466 (828)
Q Consensus 433 l~~l~~~~-ItVGvDGSVy~~-~p~f~-~~L~e~lre 466 (828)
++.++|+. |+|| ||+... .+.|. +.+++.+++
T Consensus 260 ~~~l~P~~gvvig--GGi~~~~~~~l~~~~~~~~~~~ 294 (332)
T 1sz2_A 260 ALNLGTFGGVFIA--GGIVPRFLEFFKASGFRAAFED 294 (332)
T ss_dssp HHHHTCTTEEEEE--CSSSGGGHHHHHHSSHHHHHHC
T ss_pred HHHHCCCeEEEEE--ChhhhhHHHHhccHHHHHHHHh
Confidence 99999998 9998 999876 44444 356666653
No 29
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=99.83 E-value=6.9e-20 Score=194.55 Aligned_cols=166 Identities=11% Similarity=0.178 Sum_probs=126.2
Q ss_pred cceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccC----CCCcEEEEEEcccccceeec
Q psy4666 199 KCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIGVIVGTGFNACYVE 274 (828)
Q Consensus 199 ~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~----~~~~~IGLILGTGtNacYiE 274 (828)
.+++..|. |.|+.+.|++.+ + +| |.+.||+++++++|.|. +.++.+.+++|||++++++.
T Consensus 78 ~~~~~~w~---------~~~l~~~l~~~~---~-~p---V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtGiG~gii~ 141 (302)
T 3epq_A 78 ATPXAGWR---------HYPFLQTVXNEM---X-IP---VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTGIGAGAIV 141 (302)
T ss_dssp CCSSTTTB---------TCCHHHHHHHHH---C-SC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEEEEEE
T ss_pred cCCCCCcc---------CCChHHHHHHHh---C-CC---EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCceEEEEEE
Confidence 34567883 367999999987 4 66 59999999999999775 56899999999999999999
Q ss_pred cccccccCCCCCCCCcEEEecC-----CCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHHHHH
Q psy4666 275 RTENVSTFENEANKPFVVINTE-----WGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKF 349 (828)
Q Consensus 275 ~~~~i~kl~gage~G~MiINtE-----wG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl~l 349 (828)
+++.+.+.+ ++|.|||.++.. .+.||.. ..|+|.++||..|-+..+.
T Consensus 142 ~G~l~~G~~-agEiGh~~v~~~~~~~~~~~C~~~----------------------~gclE~~~S~~al~~~~~~----- 193 (302)
T 3epq_A 142 EGRLLQGLS-HPEMGHIYIRRHPDDVYQGXCPYH----------------------GDCFEGLASGPAIEARWGX----- 193 (302)
T ss_dssp TTEECCSSS-CCCGGGCCCCCCTTCCCCCSBTTT----------------------BSSHHHHHSHHHHHHHHSS-----
T ss_pred CCEEcccCC-CCccceEEEecCCCCCcCcccCCC----------------------CcchhhhCCHHHHHHHhhc-----
Confidence 999877765 589999999743 1234322 1279999999998543210
Q ss_pred hhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4666 350 TEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASAGI 429 (828)
Q Consensus 350 ~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgL 429 (828)
. ... +. + +..+++++++++|.+|
T Consensus 194 --~--------~~~--------------~~-------------------------~--------~~~~~~~~~~~La~~i 216 (302)
T 3epq_A 194 --K--------AAD--------------LS-------------------------D--------IAQVWELEGYYIAQAL 216 (302)
T ss_dssp --C--------GGG--------------GT-------------------------T--------CHHHHHHHHHHHHHHH
T ss_pred --c--------ccc--------------cc-------------------------c--------hHHHHHHHHHHHHHHH
Confidence 0 000 00 0 1235677899999999
Q ss_pred HHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhc
Q psy4666 430 ATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALI 468 (828)
Q Consensus 430 AAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~ 468 (828)
+++++.++|+.|+|| |++.+.. .|.+.+++.+++..
T Consensus 217 ~nl~~~ldPe~IviG--Ggi~~~~-~l~~~i~~~l~~~~ 252 (302)
T 3epq_A 217 AQYILILAPXXIILG--GGVMQQX-QVFSYIYQYVPKIM 252 (302)
T ss_dssp HHHHHHTCCSCEEEE--SSGGGCT-HHHHHHHHHHHHHH
T ss_pred HHHHHHHCchhhhcC--chhhhhH-HHHHHHHHHHHHHH
Confidence 999999999999999 9998874 48899999988764
No 30
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=99.75 E-value=2.6e-18 Score=186.23 Aligned_cols=181 Identities=11% Similarity=0.053 Sum_probs=124.9
Q ss_pred cHHHHHHHHHHhcCCCCccEEEEEechHHHHHh---------------cccC----------------CCCcEEEEEEcc
Q psy4666 218 NVVELLQQALVRRSNFPVNVVAILNDTAGCLVS---------------CAYD----------------HKHCKIGVIVGT 266 (828)
Q Consensus 218 DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLa---------------eay~----------------~~~~~IGLILGT 266 (828)
|+.+++++.+ ++.+|.|.||+++++++ +.+. +.++.+.+++||
T Consensus 118 ~l~~~l~~~~------~~~pv~v~NDa~aaalge~~l~~~~~~~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GT 191 (373)
T 2q2r_A 118 RLSDYPKALF------PPGHSAILNDLEAGGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGT 191 (373)
T ss_dssp EGGGSCTTTS------CTTSEEEEEHHHHHHHHHHHHHHTTCHHHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESS
T ss_pred CHHHHHHHhc------CCCCEEEEccHhHHhccccccChhhhccccchhhcccccccccccCCCcCcCCCCCEEEEEeCC
Confidence 4555555432 33246999999999999 5653 347899999999
Q ss_pred cccceeeccccccccCCC-CCCCCcEEEecCC-CccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHH
Q psy4666 267 GFNACYVERTENVSTFEN-EANKPFVVINTEW-GAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRL 344 (828)
Q Consensus 267 GtNacYiE~~~~i~kl~g-age~G~MiINtEw-G~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRl 344 (828)
|+|+|++.+++.+.+.++ ++|.|||.++... +.||.. +-+.+ .+..|+|.++||..|.++.+.
T Consensus 192 GiG~gii~~g~l~~G~~~~aGE~Gh~~~~~~~~c~cg~~---------l~~~~------~~~g~lE~~~S~~~l~~~~~~ 256 (373)
T 2q2r_A 192 GLGSSLIYYNPPMNQHIVVPLELGSQTLPMRKDIDYIQT---------LHAEL------KLFPNYENMVSGAGLEFHYRQ 256 (373)
T ss_dssp SEEEEEEEECC---CEEEEEECGGGSBCCCSSCHHHHHH---------HHHHH------TSCCBHHHHSSHHHHHHHHHH
T ss_pred ceeEEEEecCcccCCCcccccccceeecCCCCCcchhHH---------HHHHh------hccccHhHhcCHHHHHHHHHH
Confidence 999999999988877766 7899999997431 234430 00000 013479999999999776554
Q ss_pred HHHHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy4666 345 MMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHL 424 (828)
Q Consensus 345 iLl~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~L 424 (828)
.. .+. ++ .. .++.++ +.+..++..|..++++++++
T Consensus 257 ~~-----~~~------~~------~~-----------------~~~~i~-----------~~a~~gD~~a~~~l~~~~~~ 291 (373)
T 2q2r_A 257 VV-----RGS------RP------PC-----------------SAGEIA-----------KLASEGDANACKAMKKYHEY 291 (373)
T ss_dssp HH-----TTS------SC------CC-----------------CHHHHH-----------HHHHTTCHHHHHHHHHHHHH
T ss_pred Hh-----cCC------CC------CC-----------------CHHHHH-----------HHHHcCCHHHHHHHHHHHHH
Confidence 21 010 00 01 123344 44566778999999999999
Q ss_pred HHHHHHHHHhhcCCCeEEEEEcCc-eeecchhHHH--HHHHHHHhh
Q psy4666 425 ASAGIATLLNRMDFSIVTVGVDGS-VYRYHPYFHH--MMLEKIPAL 467 (828)
Q Consensus 425 lAAgLAAIl~~l~~~~ItVGvDGS-Vy~~~p~f~~--~L~e~lreL 467 (828)
+|.+++++++.++|+.|+|| || +.+. +.|.+ .+++.+++.
T Consensus 292 L~~~i~~l~~~l~p~~Ivlg--GG~~~~~-~~~~~~~~i~~~l~~~ 334 (373)
T 2q2r_A 292 LMRVGSEASMALLPLTIVLV--GDNIVNN-AFFYRNPQNLKEMHHE 334 (373)
T ss_dssp HHHHHHHHHHHHCCSEEEEC--SHHHHHT-HHHHHSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEe--CChHhCc-hhhhcchhHHHHHHHH
Confidence 99999999999999988887 88 5554 88888 777777654
No 31
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=99.70 E-value=4.1e-16 Score=161.54 Aligned_cols=218 Identities=17% Similarity=0.250 Sum_probs=152.9
Q ss_pred CcccccEEEEEeCCceEEEEEEE-e-CceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEe
Q psy4666 35 GTETGKFLALDLGGTNFRVLMIY-A-GEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFS 112 (828)
Q Consensus 35 G~E~G~fLalDLGGTn~Rv~lV~-~-G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFS 112 (828)
..+...++++|+|||++|+++++ . |+.. .....++.|.. .+.+++++.|.+.+.+++.+...... ..|+++|
T Consensus 8 ~~~~~~~lgidiggt~i~~~l~dl~~g~i~-~~~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~~~~~--~~~igi~ 81 (267)
T 1woq_A 8 SHKNAPLIGIDIGGTGIKGGIVDLKKGKLL-GERFRVPTPQP---ATPESVAEAVALVVAELSARPEAPAA--GSPVGVT 81 (267)
T ss_dssp ---CCCEEEEEECSSEEEEEEEETTTTEEE-EEEEEEECCSS---CCHHHHHHHHHHHHHHHHTSTTCCCT--TCCEEEE
T ss_pred cCCCCEEEEEEECCCEEEEEEEECCCCeEE-EEEEecCCCcc---CCHHHHHHHHHHHHHHHHHhccccCc--cceEEEE
Confidence 33444689999999999999999 6 5532 12234454422 13578899999999998865432111 1244444
Q ss_pred cc--ccccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhccccccc
Q psy4666 113 FP--VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLL 190 (828)
Q Consensus 113 FP--v~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 190 (828)
.| ++ + |++
T Consensus 82 ~pG~v~-----~-----------------------------g~v------------------------------------ 91 (267)
T 1woq_A 82 FPGIIQ-----H-----------------------------GVV------------------------------------ 91 (267)
T ss_dssp ESSCEE-----T-----------------------------TEE------------------------------------
T ss_pred ccceEc-----C-----------------------------CEE------------------------------------
Confidence 44 43 2 444
Q ss_pred ccCccccccceee--ccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccC----CCC-cEEEEE
Q psy4666 191 CSSSTTISKCVLV--RWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKH-CKIGVI 263 (828)
Q Consensus 191 ~~~~~~i~~~~n~--~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~----~~~-~~IGLI 263 (828)
..++|+ .|. +.|+.+.|++.+ + +| |.+.||++++++++.+. +.+ +.+.++
T Consensus 92 -------~~~~~l~~~w~---------~~~l~~~l~~~~---~-~p---V~v~NDanaaalaE~~~g~~~~~~~~~~~l~ 148 (267)
T 1woq_A 92 -------HSAANVDKSWL---------NTDIDALLTARL---G-RP---VEVINDADAAGLAEARYGAGAGVKGTVLVIT 148 (267)
T ss_dssp -------CCCTTSCGGGT---------TCBHHHHHHHHH---T-SC---EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEE
T ss_pred -------EeCCCCCCCCC---------CCCHHHHHHHHH---C-CC---EEEeehhHHHHHHHHHhCCCCCCCCcEEEEE
Confidence 234456 583 357999999987 4 66 59999999999999764 334 578999
Q ss_pred EcccccceeeccccccccCCCCCCCCcEEEecCCCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHH
Q psy4666 264 VGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVR 343 (828)
Q Consensus 264 LGTGtNacYiE~~~~i~kl~gage~G~MiINtEwG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvR 343 (828)
+|||+++|++.+++.+.+ +|.|||.++. + |+|.++|+..+-+
T Consensus 149 ~GtGIG~giv~~G~l~~G----gEiGh~~v~~--------~-----------------------~lE~~~S~~~l~~--- 190 (267)
T 1woq_A 149 LGTGIGSAFIFDGKLVPN----AELGHLEIDG--------H-----------------------DAETKASAVARER--- 190 (267)
T ss_dssp ESSSEEEEEEETTEEETT----CCGGGCEETT--------E-----------------------EHHHHHSHHHHHH---
T ss_pred ECcceEEEEEECCEEccC----ceeeeEEecC--------c-----------------------cHHHHhCHHHHhh---
Confidence 999999999999986654 5888888851 0 4899999876521
Q ss_pred HHHHHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy4666 344 LMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAH 423 (828)
Q Consensus 344 liLl~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~ 423 (828)
.. ..++++++
T Consensus 191 --------~~--------------------------------------------------------------~~~~~~~~ 200 (267)
T 1woq_A 191 --------DG--------------------------------------------------------------LSWDEYSV 200 (267)
T ss_dssp --------TT--------------------------------------------------------------CCHHHHHH
T ss_pred --------cc--------------------------------------------------------------hhHHHHHH
Confidence 00 00245677
Q ss_pred HHHHHHHHHHhhcCCCeEEEEEcCceeecchhHHHHHH
Q psy4666 424 LASAGIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMML 461 (828)
Q Consensus 424 LlAAgLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~ 461 (828)
.+|.+|+++++.++|+.|+|| |++....+.|.+.++
T Consensus 201 ~l~~~l~~l~~~ldP~~Ivlg--G~i~~~~~~~~~~~~ 236 (267)
T 1woq_A 201 LLQRYFSHVEFLFSPELFIVG--GGISKRADEYLPNLR 236 (267)
T ss_dssp HHHHHHHHHHHHHCCSEEEEE--SGGGGGGGGTGGGCC
T ss_pred HHHHHHHHHHHHcCCCEEEEe--ChhhcccHHHHHhhc
Confidence 889999999999999999999 999998887776654
No 32
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=99.70 E-value=8.4e-16 Score=163.51 Aligned_cols=267 Identities=15% Similarity=0.131 Sum_probs=163.8
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEec-CCCcccCCccchHHHHHHHHHHHHhhccCCCC-ccceEEEEecccc
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPI-SPEIMTGPGEQLFDYIAESLENFVREQKAENE-HLPLGFTFSFPVD 116 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~I-p~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~-~l~LGftFSFPv~ 116 (828)
.+|+||+|||++|+++++ +|+... ...+ |......+.+++++.|++.+.+++++.+.... . ..|+++|.|
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~i~~----~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~-i~gigi~~p-- 79 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGKILA----EADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVP-LRSLGLSLS-- 79 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSCEEE----EEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCC-BSEEEEEET--
T ss_pred EEEEEEcCccceEEEEEeCCCCEEE----EEeCCCCCcccCCHHHHHHHHHHHHHHHHHhcCCCcccc-eeEEEEecc--
Confidence 578999999999999999 887522 2233 22221124678999999999999988765433 2 256655555
Q ss_pred ccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccCccc
Q psy4666 117 MMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSSTT 196 (828)
Q Consensus 117 q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 196 (828)
|.+ +
T Consensus 80 -----------------------------------G~v-d---------------------------------------- 83 (347)
T 2ch5_A 80 -----------------------------------GGD-Q---------------------------------------- 83 (347)
T ss_dssp -----------------------------------TTT-C----------------------------------------
T ss_pred -----------------------------------CCC-c----------------------------------------
Confidence 322 0
Q ss_pred cccceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccCCCCcEEEEEEcccccceeeccc
Q psy4666 197 ISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERT 276 (828)
Q Consensus 197 i~~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~~~~~~IGLILGTGtNacYiE~~ 276 (828)
. -. +.++.+.|++.+... .+ +|.|.||+++++++ .+ .++.+.+++|||+|++.+..
T Consensus 84 --~---~~-----------~~~l~~~l~~~~~~~-~~---pv~v~NDa~aaa~a-~~--~~~~v~v~~GTGig~~~v~~- 139 (347)
T 2ch5_A 84 --E---DA-----------GRILIEELRDRFPYL-SE---SYLITTDAAGSIAT-AT--PDGGVVLISGTGSNCRLINP- 139 (347)
T ss_dssp --H---HH-----------HHHHHHHHHHHCTTS-BS---CEEEEEHHHHHHHH-HC--SSCEEEEEESSSEEEEEECT-
T ss_pred --h---HH-----------HHHHHHHHHHhcCCC-Cc---eEEEECcHHHHHHh-hC--CCCcEEEEEcCCceeEEEcC-
Confidence 0 00 134666666644100 13 46999999999999 44 36889999999999987642
Q ss_pred cccccCCCCCCCCcEEEecCCCccCCCCcccccccchhhhhcccCCCcchhHHHH-hhccccHHHHHHHHHHHHhhcCcc
Q psy4666 277 ENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEK-MVSGMYMGEIVRLMMEKFTEEGIL 355 (828)
Q Consensus 277 ~~i~kl~gage~G~MiINtEwG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEK-mvSG~YLGELvRliLl~l~~~glL 355 (828)
.|. .+.||..|| +|- ..||.|++..+.....+... +..
T Consensus 140 -----------~G~------~c~cG~~G~-----------------------l~~de~s~~~i~~~~~~~~~~~~d-g~~ 178 (347)
T 2ch5_A 140 -----------DGS------ESGCGGWGH-----------------------MMGDEGSAYWIAHQAVKIVFDSID-NLE 178 (347)
T ss_dssp -----------TSC------EEEEECCCT-----------------------TTCCTTSHHHHHHHHHHHHHHHHH-TSS
T ss_pred -----------CCC------EEecCCcCc-----------------------ccCCCccHHHHHHHHHHHHHHHHh-CCC
Confidence 122 244566665 333 45777887654433221111 110
Q ss_pred cCCCCC-----ccccccCccCh-hH-HHHhhhcC-CCChH-HHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy4666 356 FNGKGS-----HQLSTRGIFDT-MY-ISTIEAAD-VGDIS-ICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLAS 426 (828)
Q Consensus 356 F~g~~~-----~~L~~~~sfdT-~~-ls~Ie~~~-~~~~~-~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlA 426 (828)
.. ..+ +.+.....+++ .. +..+..+. ..++. .++.++ +.++.++..|..+++++++++|
T Consensus 179 ~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----------~~a~~gD~~a~~il~~~~~~La 246 (347)
T 2ch5_A 179 AA-PHDIGYVKQAMFHYFQVPDRLGILTHLYRDFDKCRFAGFCRKIA-----------EGAQQGDPLSRYIFRKAGEMLG 246 (347)
T ss_dssp CC-SSCCHHHHHHHHHHHTCSSHHHHHTTTTTTCCHHHHHTTHHHHH-----------HHHHTTCHHHHHHHHHHHHHHH
T ss_pred CC-CCCccHHHHHHHHHhCCCCHHHHHHHHhcCCcHHHHHHHHHHHH-----------HHHHcCCHHHHHHHHHHHHHHH
Confidence 00 000 00000000000 00 00000000 00010 134555 5566788999999999999999
Q ss_pred HHHHHHHhhcCCC--------eEEEEEcCceeecchhHHHHHHHHHHhhc
Q psy4666 427 AGIATLLNRMDFS--------IVTVGVDGSVYRYHPYFHHMMLEKIPALI 468 (828)
Q Consensus 427 AgLAAIl~~l~~~--------~ItVGvDGSVy~~~p~f~~~L~e~lreL~ 468 (828)
.+|+++++.++|+ .|++| ||+++..|.|.+.+++.+++..
T Consensus 247 ~~i~~l~~~~~p~~~~~~~~~~Ivlg--Ggv~~~~~~~~~~~~~~l~~~~ 294 (347)
T 2ch5_A 247 RHIVAVLPEIDPVLFQGKIGLPILCV--GSVWKSWELLKEGFLLALTQGR 294 (347)
T ss_dssp HHHHHHGGGSCGGGGCSTTCEEEEEE--SGGGGGHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcccccccCCCceEEEE--CCcccCcHHHHHHHHHHHHhhc
Confidence 9999999999999 88888 9999999999999999998874
No 33
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=99.69 E-value=7e-17 Score=166.25 Aligned_cols=116 Identities=16% Similarity=0.112 Sum_probs=96.5
Q ss_pred EEEEechHHHHHhcccCCCCcEEEEEEcccccceeeccccccccCCCCCCCCcEEEecCCCccCCCCcccccccchhhhh
Q psy4666 238 VAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVSTFENEANKPFVVINTEWGAFGDDGALDFLLTEFDRTI 317 (828)
Q Consensus 238 vAVvNDTVaTLLaeay~~~~~~IGLILGTGtNacYiE~~~~i~kl~gage~G~MiINtEwG~FG~~G~l~~~~T~fD~~i 317 (828)
|.+.||++++++++.+. .+.+.+++|||+++|++.+++.++ +|.|||.++.. |
T Consensus 95 v~v~NDanaaalge~~~--~~~~~l~~GtGiG~gii~~G~l~~-----GEiGH~~v~~~-------g------------- 147 (226)
T 3lm2_A 95 VRIVNDALMQAIGSYNG--GRMLFLGLGTGLGAAMIVENVAQP-----MEIAHLPYRKG-------K------------- 147 (226)
T ss_dssp EEEEEHHHHHHHHHCCS--SEEEEEEESSSEEEEEEETTEEEE-----ECCTTSEEETT-------E-------------
T ss_pred EEEEEHHHHHHHHHhhc--CcEEEEEeCCceEEEEEECCEEee-----eeeeeEEecCC-------C-------------
Confidence 59999999999999876 689999999999999999988655 48899988632 3
Q ss_pred cccCCCcchhHHHHhhccccHHHHHHHHHHHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhh
Q psy4666 318 DDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRL 397 (828)
Q Consensus 318 D~~S~npg~q~fEKmvSG~YLGELvRliLl~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~l 397 (828)
|+|.++|+..|-+..
T Consensus 148 ----------clE~~~s~~al~~~~------------------------------------------------------- 162 (226)
T 3lm2_A 148 ----------TYEHYVSEAYREKKG------------------------------------------------------- 162 (226)
T ss_dssp ----------EHHHHTCHHHHHHHC-------------------------------------------------------
T ss_pred ----------cHHHHhCHHHHHHHH-------------------------------------------------------
Confidence 699999998873210
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhh
Q psy4666 398 ALPHATAQDCIDVRYLCRVVSQRSAHLASAGIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPAL 467 (828)
Q Consensus 398 gl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL 467 (828)
+ +++++++|.+|+++++.++|+.|++| |++.+..+.|.+.+++.+++.
T Consensus 163 -------~-------------~~~~~~L~~~la~l~~~~dP~~IVlG--G~~~~~~~~~~~~i~~~~~~~ 210 (226)
T 3lm2_A 163 -------N-------------AKWQKRVQDVVERLSAALEPDEVVIG--GGNVERLENLPPKCRRGDNAM 210 (226)
T ss_dssp -------H-------------HHHHHHHHHHHHHHHHHHCCSEEEEE--SGGGGGCCCCCTTEEECCTTH
T ss_pred -------H-------------HHHHHHHHHHHHHHHHHHCCCEEEEe--ChhhhhhhHHHHHHHHHHHHc
Confidence 0 24567899999999999999999999 999999998888877766554
No 34
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=99.68 E-value=1.9e-17 Score=181.30 Aligned_cols=281 Identities=11% Similarity=0.135 Sum_probs=180.0
Q ss_pred cEEEEEeCCceEEEEEEEeCceeEEEEEEEecCCCcccCCccchHHHH---HHHHHHHHhhccCCCCccceEEEEecc--
Q psy4666 40 KFLALDLGGTNFRVLMIYAGEKFRMEHKTYPISPEIMTGPGEQLFDYI---AESLENFVREQKAENEHLPLGFTFSFP-- 114 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~I---A~~i~~fl~e~~~~~~~l~LGftFSFP-- 114 (828)
.+|+||+|||++|+++++.++. +.....+.|..... +.+++++.+ .+.|.+++++.+.....+ .|+ ++.|
T Consensus 3 ~vlgidiGgt~ik~al~d~~~i--l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i-~gI-i~~pG~ 77 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDERM--VKMQNFSHSPDELG-RFQKILDQLEFREKIARQFVEETGYSLSSF-SAF-VSRGGL 77 (381)
T ss_dssp EEEEEEECSSEEEEEEEETTEE--EEEEEEECCHHHHH-TCSSGGGGHHHHHHHHHHHHHTTTCCGGGC-SEE-EEECCS
T ss_pred eEEEEECCccceeEEEEecchh--eeeeecccCccccc-chhhHHHHHHHHHHHHHHHHHHcCCCccCc-eEE-EecCCC
Confidence 4789999999999999984443 22334444321000 123556666 888888888765433333 677 7776
Q ss_pred ccccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccCc
Q psy4666 115 VDMMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSS 194 (828)
Q Consensus 115 v~q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 194 (828)
++.. + |.+. .+. +-+.+.+.+.+.
T Consensus 78 vd~~---~-----------------------------G~~~----------~i~----~~~~~~l~~~~~---------- 101 (381)
T 1saz_A 78 LDPI---P-----------------------------GGVY----------LVD----GLMIKTLKSGKN---------- 101 (381)
T ss_dssp CSCB---C-----------------------------SSEE----------ECC----HHHHHHHHHTTT----------
T ss_pred CCCC---C-----------------------------CceE----------ecC----HHHHHHHHhccc----------
Confidence 4332 1 2220 011 111222222000
Q ss_pred cccccceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechH---------HHHH----------------
Q psy4666 195 TTISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTA---------GCLV---------------- 249 (828)
Q Consensus 195 ~~i~~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTV---------aTLL---------------- 249 (828)
...++|+ +.++.+.|++.+ + +|+ .|.||++ ++++
T Consensus 102 --~~~~~nl------------~~~l~~~l~~~~---~-~Pv---~v~NDan~~~~~~~a~aaalp~~~r~~gfhgls~~~ 160 (381)
T 1saz_A 102 --GEHASNL------------GAIIAHRFSSET---G-VPA---YVVDPVVVDEMEDVARVSGHPNYQRKSIFHALNQKT 160 (381)
T ss_dssp --CCCTTHH------------HHHHHHHHHHHH---C-CCE---EEESCTTBCCCCGGGTBCSSTTCBCCCCSCHHHHHH
T ss_pred --ccChhhh------------hHHHHHHHHHhc---C-CCE---EEeCCCccccCcHHHHHcCCcchhhhcccccccHHH
Confidence 1112223 345777777766 4 674 7999999 8888
Q ss_pred -hc-ccC----CCC--cEEEEEEcccccceeeccccccccCCC-CCCCCcEEEecCC-CccCCCCcccccccchhhhhcc
Q psy4666 250 -SC-AYD----HKH--CKIGVIVGTGFNACYVERTENVSTFEN-EANKPFVVINTEW-GAFGDDGALDFLLTEFDRTIDD 319 (828)
Q Consensus 250 -ae-ay~----~~~--~~IGLILGTGtNacYiE~~~~i~kl~g-age~G~MiINtEw-G~FG~~G~l~~~~T~fD~~iD~ 319 (828)
++ .+. +.+ +.|.+++|||+++|.+.+++.+.+..| ++| |||.++... +.||. +
T Consensus 161 ~aE~~~~g~~~~~~~~~~v~~~lGtGiG~g~i~~G~~~~G~~g~agE-Gh~~~~~~g~c~cg~---l------------- 223 (381)
T 1saz_A 161 VAKEVARMMNKRYEEMNLVVAHMGGGISIAAHRKGRVIDVNNALDGD-GPFTPERSGTLPLTQ---L------------- 223 (381)
T ss_dssp HHHHHHHHTTCCGGGCEEEEEEESSSEEEEEEETTEEEEECCGGGTC-SSCCSSCCCSCCHHH---H-------------
T ss_pred HHHHHHHhcCCCCccCCEEEEEeCCCcEEEEEECCEEEEecCCCCCC-cceeeccCCCCCCcH---H-------------
Confidence 87 443 345 899999999999999999998888777 778 999986321 22222 0
Q ss_pred cCCCcchhHHHHhhccccHHHHHHHHHHHHhhcCcccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCC
Q psy4666 320 RSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLAL 399 (828)
Q Consensus 320 ~S~npg~q~fEKmvSG~YLGELvRliLl~l~~~glLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl 399 (828)
-..|+|.++|+..|-+.++. .. + +.... ... ..+.++
T Consensus 224 -----~~gc~e~~~S~~~l~~~~~~-------~~----g----------------~~~~~--~~~---~~~~i~------ 260 (381)
T 1saz_A 224 -----VDLCFSGKFTYEEMKKRIVG-------NG----G----------------LVAYL--GTS---DAREVV------ 260 (381)
T ss_dssp -----HHHHTSSCCCTTGGGSTTTT-------SC----T----------------HHHHH--SCC---CHHHHH------
T ss_pred -----HHHHHHhCCCHHHHHHHHHh-------cc----C----------------ccccc--cCC---CHHHHH------
Confidence 02478888898877432210 00 0 00000 000 234444
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEEcCceeecchhHHHHHHHHHHhhcc
Q psy4666 400 PHATAQDCIDVRYLCRVVSQRSAHLASAGIATLLNRM--DFSIVTVGVDGSVYRYHPYFHHMMLEKIPALIS 469 (828)
Q Consensus 400 ~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLAAIl~~l--~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~p 469 (828)
+.++.++..|..+++++++.+|.+|+++++.+ +|+.|++| ||+.+..+.|.+.+++.++.+.|
T Consensus 261 -----~~a~~gd~~a~~~l~~~~~~la~~i~~l~~~l~~~p~~Ivlg--Ggi~~~~~~l~~~i~~~l~~~~~ 325 (381)
T 1saz_A 261 -----RRIKQGDEWAKRVYRAMAYQIAKWIGKMAAVLKGEVDFIVLT--GGLAHEKEFLVPWITKRVSFIAP 325 (381)
T ss_dssp -----HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSEEEEE--EGGGGCTTTHHHHHHHHHTTTSC
T ss_pred -----HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEe--CcCccChHHHHHHHHHHHHhhcC
Confidence 44456778899999999999999999999999 99999999 99999888799999999988754
No 35
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=99.67 E-value=4.3e-16 Score=163.03 Aligned_cols=258 Identities=13% Similarity=0.082 Sum_probs=165.8
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecccccc
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPVDMM 118 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFPv~q~ 118 (828)
.+|+||+|||++|+++++ +|+.. ...+++.|. ....+.+++++.|.+.+.+++.+. ..|++++.|=-..
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~i~--~~~~~~~~~-~~~~~~~~~~~~i~~~i~~~~~~~-------~~~igi~~~G~~~ 72 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGNFI--GEGSSGPGN-YHNVGLTRAIENIKEAVKIAAKGE-------ADVVGMGVAGLDS 72 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEE--EEEEESCCC-HHHHCHHHHHHHHHHHHHHHHTSC-------CSEEEEEETTCCS
T ss_pred EEEEEEeCCCcEEEEEEcCCCCEE--EEEeCCCCC-cccCCHHHHHHHHHHHHHHHHhcC-------CCEEEEEcCCCCc
Confidence 478999999999999999 88752 223333332 101135788999999998887643 2466666662211
Q ss_pred ccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccCccccc
Q psy4666 119 SLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSSTTIS 198 (828)
Q Consensus 119 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~ 198 (828)
++ |
T Consensus 73 --~~-------------------------------------~-------------------------------------- 75 (299)
T 2e2o_A 73 --KF-------------------------------------D-------------------------------------- 75 (299)
T ss_dssp --HH-------------------------------------H--------------------------------------
T ss_pred --hh-------------------------------------H--------------------------------------
Confidence 01 0
Q ss_pred cceeeccccCcccCCCcCccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccCCCCcEEEEEEcccccceeeccccc
Q psy4666 199 KCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTEN 278 (828)
Q Consensus 199 ~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~~~~~~IGLILGTGtNacYiE~~~~ 278 (828)
+ .++.+.|++ + + + +|.+.||++++++++.+ .++.+.+++|||+ +..++
T Consensus 76 ----~-------------~~l~~~l~~-~---~-~---pv~v~ND~~aaa~~e~~--~~~~v~l~~GTG~----i~~g~- 123 (299)
T 2e2o_A 76 ----W-------------ENFTPLASL-I---A-P---KVIIQHDGVIALFAETL--GEPGVVVIAGTGS----VVEGY- 123 (299)
T ss_dssp ----H-------------HHHHHHHTT-S---S-S---EEEEEEHHHHHHHHHHT--TSCEEEEEESSSE----EEEEE-
T ss_pred ----H-------------HHHHHHHHh-C---C-C---CEEEeCcHHHHHhhccC--CCCeEEEEecCCE----EEEEE-
Confidence 0 234444444 3 2 3 46999999999999976 5789999999994 33343
Q ss_pred cccCCC-CCCCCcEEEecC-CCccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHHHHHhhcCccc
Q psy4666 279 VSTFEN-EANKPFVVINTE-WGAFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILF 356 (828)
Q Consensus 279 i~kl~g-age~G~MiINtE-wG~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl~l~~~glLF 356 (828)
+.+..+ +++.|||.++.. .+.||..|. ..-.+|+|.++|+..|.+.++..+ . .
T Consensus 124 ~~G~~~~aGE~Gh~~~~~g~~c~cG~~gl-----------------~~~~~~le~~~s~~~l~~~~~~~~----~--~-- 178 (299)
T 2e2o_A 124 NGKEFLRVGGRGWLLSDDGSAYWVGRKAL-----------------RKVLKMMDGLENKTILYNKVLKTI----N--V-- 178 (299)
T ss_dssp CSSCEEEEECSCTTTCCTTSHHHHHHHHH-----------------HHHHHHHTTSSCCCHHHHHHHHHT----T--C--
T ss_pred cCCeEEecCCcCCCcCCCccHHHHHHHHH-----------------HHHHHHHhCCCCCCHHHHHHHHHh----C--C--
Confidence 344444 678888887631 012443320 001128999999999976554321 0 0
Q ss_pred CCCCCccccccCccChhHHHHhhhcCC--CCh-HHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4666 357 NGKGSHQLSTRGIFDTMYISTIEAADV--GDI-SICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASAGIATLL 433 (828)
Q Consensus 357 ~g~~~~~L~~~~sfdT~~ls~Ie~~~~--~~~-~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLAAIl 433 (828)
..+..+ +..+...+. .++ ..++.++ +.++.++..|..+++++++++|.++++++
T Consensus 179 --~~~~~l----------~~~~~~~~~~~~~~~~~~~~v~-----------~~a~~gd~~a~~il~~~~~~La~~i~~l~ 235 (299)
T 2e2o_A 179 --KDLDEL----------VMWSYTSSCQIDLVASIAKAVD-----------EAANEGDTVAMDILKQGAELLASQAVYLA 235 (299)
T ss_dssp --CSHHHH----------HHHHHHHTTCHHHHHTTHHHHH-----------HHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCHHHH----------HHHHHcCCCCHHHHHHHHHHHH-----------HHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 000000000 000 0244555 55677889999999999999999999999
Q ss_pred hhcCCCeEEEEEcCceeecchhHHHHHHHHHHhh
Q psy4666 434 NRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPAL 467 (828)
Q Consensus 434 ~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL 467 (828)
+.++|+.|++| ||+... +.|.+.+++.+++.
T Consensus 236 ~~l~p~~Ivlg--Ggv~~~-~~~~~~l~~~~~~~ 266 (299)
T 2e2o_A 236 RKIGTNKVYLK--GGMFRS-NIYHKFFTLYLEKE 266 (299)
T ss_dssp HHHTCSEEEEE--SGGGGS-HHHHHHHHHHHHHT
T ss_pred HhcCCCEEEEE--CCccCc-HHHHHHHHHHCCCC
Confidence 99999999998 999998 99999999888765
No 36
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=99.56 E-value=1.6e-14 Score=152.24 Aligned_cols=257 Identities=13% Similarity=0.076 Sum_probs=152.7
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEec-CCCcccCCccchHHHHHHHHHHHHhhccCCCCcc-ceEEEEecccc
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPI-SPEIMTGPGEQLFDYIAESLENFVREQKAENEHL-PLGFTFSFPVD 116 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~I-p~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l-~LGftFSFPv~ 116 (828)
.+|+||+|||++|+++++ +|+... .... |..... +.+++++.+.+.+.+++++.+.....+ +.|+.++.|
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~il~----~~~~~~~~~~~-~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~igig~p-- 84 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGTPLA----MAEGGASALSQ-GIAKSWQAVLSTLEAAFQQAGLPAAPASACAIGLGLS-- 84 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCCEEE----EEEESCCCGGG-CHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEEEEES--
T ss_pred EEEEEEcCccceEEEEEcCCCCEEE----EEeCCCCCccc-CHHHHHHHHHHHHHHHHHhcCCChhhhccceEEEEec--
Confidence 478999999999999999 887522 1222 222222 367899999999999998776544444 256655555
Q ss_pred ccccchhhhhhhhccccccccccccCCCcccccCCeEEEeccccceecccccchHHHHHHHHHHHhhcccccccccCccc
Q psy4666 117 MMSLTKVRVLLFRNVSANAKFYTYTDHPLVLFHSPGVLVRWTKGFKCEGVVGANVVELLQQALVRRCGISNVLLCSSSTT 196 (828)
Q Consensus 117 q~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~L~~~~kGf~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 196 (828)
|.+ +.
T Consensus 85 -----------------------------------G~v-~~--------------------------------------- 89 (305)
T 1zc6_A 85 -----------------------------------GVH-NR--------------------------------------- 89 (305)
T ss_dssp -----------------------------------CCC-TT---------------------------------------
T ss_pred -----------------------------------CCC-ch---------------------------------------
Confidence 333 00
Q ss_pred cccceeeccccCcccCCCcCccHHHHHHHHHHhcCCCC-ccEEEEEechHHHHHhcccCCCCcEEEEEEcccccceeec-
Q psy4666 197 ISKCVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFP-VNVVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVE- 274 (828)
Q Consensus 197 i~~~~n~~WtKgf~~~~v~G~DVv~LLqeAL~rrg~l~-V~vvAVvNDTVaTLLaeay~~~~~~IGLILGTGtNacYiE- 274 (828)
-.|. + |+. + ++ -.+|.|.||++++++++. +.++.+.+++|||++++.+.
T Consensus 90 ------~~~~-----------~----l~~----~--~~~~~pv~v~NDa~aaa~ge~--~~~~~v~v~~GTGigg~~i~~ 140 (305)
T 1zc6_A 90 ------QWAG-----------E----FES----Q--APGFARLSLATDGYTTLLGAH--GGQPGIIVALGTGSIGEALYP 140 (305)
T ss_dssp ------SHHH-----------H----HHH----T--CCCCSEEEEECHHHHHHHHHT--TTSSEEEEEESSSEEEEEECT
T ss_pred ------HHHH-----------H----HHH----h--CCCCceEEEECCHHHHHHhhc--CCCCeEEEEecCCeEEEEEeC
Confidence 1131 0 222 1 21 125799999999999983 35788999999999655554
Q ss_pred cccccccCCCCCCCCcEEEecCCC-ccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHHHHHhhcC
Q psy4666 275 RTENVSTFENEANKPFVVINTEWG-AFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEG 353 (828)
Q Consensus 275 ~~~~i~kl~gage~G~MiINtEwG-~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl~l~~~g 353 (828)
+++.. .+++.|||.++...+ .||..+++..+ -.+|- ..+..+...++|.+.+ .....+++.+ . ..
T Consensus 141 ~G~~~----~aGe~Gh~~~d~g~~~~iG~~~~~~~~-~~~~g---~~~~~~~~~~~~~~~~-~~~~~l~~~~----~-~~ 206 (305)
T 1zc6_A 141 DGSHR----EAGGWGYPSGDEASGAWLGQRAAQLTQ-MALDG---RHSHSPLTRAVLDFVG-GDWQAMMAWN----G-RA 206 (305)
T ss_dssp TSCEE----EESCCCTTTSCTTSHHHHHHHHHHHHH-HHHHT---SSCCCHHHHHHHHHHT-SSHHHHHHHH----H-TC
T ss_pred CCcEE----EecCcccccCCCchHHHHHHHHHHHHH-HHHhC---CCCCChHHHHHHHHHC-cCHHHHHHHH----h-cc
Confidence 55421 145677776653221 13332221100 00110 1122333455555554 1112222211 0 00
Q ss_pred cccCCCCCccccccCccChhHHHHhhhcCCCChHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4666 354 ILFNGKGSHQLSTRGIFDTMYISTIEAADVGDISICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASAGIATLL 433 (828)
Q Consensus 354 lLF~g~~~~~L~~~~sfdT~~ls~Ie~~~~~~~~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLAAIl 433 (828)
... .+. ..++.++ +.+ .++.+|..+++++++++|.+|++++
T Consensus 207 -----------------~~~---~~~-------~~~~~v~-----------~~a-~GD~~A~~i~~~~~~~L~~~l~~l~ 247 (305)
T 1zc6_A 207 -----------------TPA---QFA-------RLAPLVL-----------SAA-RVDPEADALLRQAGEDAWAIARALD 247 (305)
T ss_dssp -----------------CHH---HHH-------TTHHHHH-----------HHT-TTCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred -----------------CHH---HHH-------HHHHHHH-----------HHc-CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 000 000 0234555 455 6789999999999999999999999
Q ss_pred hhcCCCeEEEEEcCceeec-chhHHHHHHHH
Q psy4666 434 NRMDFSIVTVGVDGSVYRY-HPYFHHMMLEK 463 (828)
Q Consensus 434 ~~l~~~~ItVGvDGSVy~~-~p~f~~~L~e~ 463 (828)
+. +|+.|++| ||+... .|.|.+.+++.
T Consensus 248 ~~-~p~~Vvlg--Ggv~~~~~~~l~~~l~~~ 275 (305)
T 1zc6_A 248 PQ-DELPVALC--GGLGQALRDWLPPGFRQR 275 (305)
T ss_dssp TT-CCSCEEEE--SHHHHHTGGGSCHHHHHH
T ss_pred cC-CCCeEEEE--CCchHhHHHHHHHHHHhh
Confidence 98 99999999 999864 56677766653
No 37
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=99.52 E-value=3.9e-15 Score=156.22 Aligned_cols=182 Identities=13% Similarity=0.063 Sum_probs=102.4
Q ss_pred cHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccCCCCcEEEEEEccccc-ceeeccccccccCCCCCCCCcEEEecC
Q psy4666 218 NVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFN-ACYVERTENVSTFENEANKPFVVINTE 296 (828)
Q Consensus 218 DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~~~~~~IGLILGTGtN-acYiE~~~~i~kl~gage~G~MiINtE 296 (828)
++.+.|++.+ + .. .+|.|.||++++++++. +.++.+.+|+|||++ ++++.+++... +++.|||+.+..
T Consensus 75 ~l~~~l~~~~---~-~~-~pv~v~NDa~~aalge~--g~~~~v~v~~GTGi~g~gi~~~G~~~~----aGe~Gh~~~d~g 143 (291)
T 1zxo_A 75 VLRRAIADSL---P-VI-GNIKANSDMLAAAHGLC--GQKAGIACILGTGSNSCFYNGKEIVSN----ISPLGFILGDEG 143 (291)
T ss_dssp HHHHHHHHHS---C-CC-SCCEEECSHHHHHHHTT--TTSCBEEEEESSSEEEEEECSSSEEEE----CCCCCTTTSCCS
T ss_pred HHHHHHHHhc---C-CC-ceEEEECcHHHHHHhhc--CCCCcEEEEeCCChheEEECCCCcEEE----eCCCccccCCCc
Confidence 4666666644 2 20 23699999999999995 667889999999995 77776665321 345566554421
Q ss_pred CC-ccCCCCcccccccchhhhhcccCCCcchhHHHHhhccccHHHHHHHHHHHHhhcCcccCCCCCccccccCccChhHH
Q psy4666 297 WG-AFGDDGALDFLLTEFDRTIDDRSLNRGQQIYEKMVSGMYMGEIVRLMMEKFTEEGILFNGKGSHQLSTRGIFDTMYI 375 (828)
Q Consensus 297 wG-~FG~~G~l~~~~T~fD~~iD~~S~npg~q~fEKmvSG~YLGELvRliLl~l~~~glLF~g~~~~~L~~~~sfdT~~l 375 (828)
.+ .||..++ ..+++... +..|-+.++.. +. .. ++.+ +
T Consensus 144 ~~~~~G~~~~--------------------~~~~~~~~-~~~l~~~~~~~---~~-~~-------~~~l----------~ 181 (291)
T 1zxo_A 144 SGAVLGKLLV--------------------GDILKNQL-PATLKEEFLKQ---FD-LT-------PPEI----------I 181 (291)
T ss_dssp SHHHHHHHHH--------------------HHGGGTCS-CSHHHHHHHHH---HT-CC-------HHHH----------G
T ss_pred hHHHHHHHHH--------------------HHHHHccC-CChHHHHHHHH---hC-CC-------HHHH----------H
Confidence 10 1221110 00122211 44443333221 10 00 0000 0
Q ss_pred HHhhhc--CCCCh-HHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEEcCceee
Q psy4666 376 STIEAA--DVGDI-SICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASAGIATLLNRM-DFSIVTVGVDGSVYR 451 (828)
Q Consensus 376 s~Ie~~--~~~~~-~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLAAIl~~l-~~~~ItVGvDGSVy~ 451 (828)
..+... +...+ +.++.++ + +.++.+|..+++++++.+|.++ .++.+ +|+.|++| |||++
T Consensus 182 ~~~~~~~~~~~~ia~~a~~v~-----------~--~~GD~~A~~i~~~~~~~La~~i--~~~~~~~p~~vvlg--GGv~~ 244 (291)
T 1zxo_A 182 DRVYRQPFPNRFLASLSPFIA-----------Q--HLEEPAIRQLVMNSFIAFFRRN--VMQYDYKQYPVHFI--GSIAY 244 (291)
T ss_dssp GGTTTSSCSTTTSSTTTHHHH-----------T--TTTSTTTTHHHHHHHHHHHTTT--GGGSCTTTSCEEEC--SHHHH
T ss_pred HHHhcCCCCHHHHHHhhHHHH-----------H--hCCCHHHHHHHHHHHHHHHHHH--hcccCCCCceEEEE--CcHHH
Confidence 000000 00000 0134444 2 4567889999999999999999 45555 89999998 99987
Q ss_pred cchhHHHHHHHHHHhhcccceee
Q psy4666 452 YHPYFHHMMLEKIPALISHSVIV 474 (828)
Q Consensus 452 ~~p~f~~~L~e~lreL~p~~~i~ 474 (828)
. |.+.+++.+++ |.+.|.
T Consensus 245 ~---l~~~l~~~l~~--~~~~i~ 262 (291)
T 1zxo_A 245 C---YKEILQDAARQ--TGIQIG 262 (291)
T ss_dssp H---THHHHHHHTTT--TTCCEE
T ss_pred H---HHHHHHHHHhc--CCcEEe
Confidence 6 88888888877 444443
No 38
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=99.51 E-value=6.1e-13 Score=139.58 Aligned_cols=55 Identities=13% Similarity=-0.188 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEEcCceeecchhHHHHHHHHHHhhcc
Q psy4666 408 IDVRYLCRVVSQRSAHLASAGIATLLNRM-DFSIVTVGVDGSVYRYHPYFHHMMLEKIPALIS 469 (828)
Q Consensus 408 ~~vr~Ic~aV~~RAA~LlAAgLAAIl~~l-~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~p 469 (828)
+.++.+|..+++++++.+|.++ .++.+ +|+.|++| |||++. |.+.+++.+++..+
T Consensus 206 ~~GD~~A~~i~~~~~~~La~~i--~~~~~~~p~~vvlg--GGv~~~---~~~~l~~~l~~~~~ 261 (291)
T 1zbs_A 206 HLDIPAVYSLVQNSFDDFLVRN--VLRYNRPDLPLHFI--GSVAFH---YREVLSSVIKKRGL 261 (291)
T ss_dssp TTTSHHHHHHHHHHHHHHHHHH--TGGGCCTTSCEEEE--SHHHHH---THHHHHHHHHHTTC
T ss_pred hCCCHHHHHHHHHHHHHHHHHH--hcccCCCCceEEEE--CchHHh---hHHHHHHHHHHcCC
Confidence 5678999999999999999999 45665 89999999 999876 66778888877654
No 39
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=96.64 E-value=0.0011 Score=81.33 Aligned_cols=55 Identities=24% Similarity=0.489 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcccccccccccccccccccCcccchhhee
Q psy4666 711 CRKIFEETKDQWRRTIREAFNRDLSMIRTQHNKLKTYREVNIYPFLRVLTPEEYEDIVL 769 (828)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (828)
+|+.|+++..+|+..+..||.+++..+..+. ..+.+++||||++|+.++||+|++
T Consensus 334 ~r~~l~~~~~~w~~~l~~~~~~~~~~~~~~~----~~~~~~~~p~l~~l~~~~~~~~~~ 388 (1134)
T 3spa_A 334 ARKTLKTLRDQWEKALCRALRETKNRLEREV----YEGRFSLYPFLCLLDEREVVRMLL 388 (1134)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HTTCCCSTGGGGSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----ccCCCccccceeeCCHHHHHHHHH
Confidence 8999999999999999999999999999886 334799999999999999999764
No 40
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=96.32 E-value=0.0069 Score=68.63 Aligned_cols=78 Identities=10% Similarity=0.124 Sum_probs=52.4
Q ss_pred ccccEEEEEeCCceEEEEEEE-eCceeEEEEEEEec--CC-CcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEe
Q psy4666 37 ETGKFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPI--SP-EIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFS 112 (828)
Q Consensus 37 E~G~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~I--p~-e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFS 112 (828)
.+..+|+||+|+|++|+++++ +|+.+...+..++. |. ....-+++++++.+.+++++.+++.+.....+ .|+++|
T Consensus 5 ~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~~I-~~Igis 83 (508)
T 3ifr_A 5 QGRQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESDWRP-GGICVT 83 (508)
T ss_dssp --CEEEEEEECSSEEEEEEEETTTEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGGGCCE-EEEEEE
T ss_pred cCCEEEEEEecCcceEEEEECCCCCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCChhhe-EEEEEE
Confidence 344688999999999999999 88764433333332 11 11122467899999999999988765443333 677778
Q ss_pred ccc
Q psy4666 113 FPV 115 (828)
Q Consensus 113 FPv 115 (828)
-|.
T Consensus 84 ~~~ 86 (508)
T 3ifr_A 84 GML 86 (508)
T ss_dssp ECS
T ss_pred CCC
Confidence 763
No 41
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.17 E-value=0.0099 Score=67.35 Aligned_cols=77 Identities=10% Similarity=0.202 Sum_probs=53.2
Q ss_pred ccccEEEEEeCCceEEEEEEE-eCceeEEEEEEEec--CCC-cccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEe
Q psy4666 37 ETGKFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPI--SPE-IMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFS 112 (828)
Q Consensus 37 E~G~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~I--p~e-~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFS 112 (828)
|+..||+||+|+|++|+++++ +|+.+...+..++. |.. ...-+++++++.+.+++++.+++.+.....+ .|+++|
T Consensus 1 ~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~I-~~Igis 79 (510)
T 2p3r_A 1 EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQI-AAIGIT 79 (510)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGE-EEEEEE
T ss_pred CCcEEEEEEcCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhhe-EEEEEe
Confidence 455688999999999999999 88764433333321 111 1122467899999999999998776543333 678778
Q ss_pred cc
Q psy4666 113 FP 114 (828)
Q Consensus 113 FP 114 (828)
-|
T Consensus 80 ~~ 81 (510)
T 2p3r_A 80 NQ 81 (510)
T ss_dssp EC
T ss_pred CC
Confidence 76
No 42
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=95.94 E-value=0.069 Score=56.19 Aligned_cols=65 Identities=14% Similarity=0.220 Sum_probs=42.8
Q ss_pred cEEEEEeCCceEEEEEEEeCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEeccc
Q psy4666 40 KFLALDLGGTNFRVLMIYAGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPV 115 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFPv 115 (828)
.+|+||+|+||++++++++++. ...|.+|++ .. +.+ .++..+.++++.++...+.+ -|+.+|.|+
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~l----~~~~r~~T~-~~-t~d----e~~~~l~~ll~~~~~~~~~I-~~iiISSVv 67 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDEI----KLRFRHTSK-VS-TSD----ELGIFLKSVLRENNCSPETI-RKIAICSVV 67 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTEE----EEEEEEECS-CC-CHH----HHHHHHHHHHHTTTCCGGGC-CEEEEEESC
T ss_pred eEEEEEECCCeEEEEEEECCEE----EEEEEecCC-CC-CHH----HHHHHHHHHHHHcCCChhhc-eEEEEecch
Confidence 5899999999999999986654 556788876 32 333 45666777777665432222 355445444
No 43
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.92 E-value=0.015 Score=65.49 Aligned_cols=74 Identities=16% Similarity=0.248 Sum_probs=50.1
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEec--CCC-cccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPI--SPE-IMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP 114 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~I--p~e-~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP 114 (828)
.+|+||+|||++|+++++ +|+.+...+..++. |.. ...-+.+++++.+.+++++.+++.+.....+ .|+++|.|
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i-~~Igis~~ 80 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEAGEV-LALGITNQ 80 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGC-CEEEEEEC
T ss_pred EEEEEeeCCcceEEEEECCCCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCcccE-EEEEEeCC
Confidence 478999999999999999 88754333333321 211 1112467899999999999988765433333 57777776
No 44
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.90 E-value=0.017 Score=65.32 Aligned_cols=75 Identities=16% Similarity=0.299 Sum_probs=51.6
Q ss_pred ccEEEEEeCCceEEEEEEE-eCceeEEEEEEEec--CC-CcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc
Q psy4666 39 GKFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPI--SP-EIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP 114 (828)
Q Consensus 39 G~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~I--p~-e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP 114 (828)
..+|+||+|+|++|+++++ +|+.+...+..++. |. ....-+++++++.+.+++++.+++.+.....+ .|+++|-+
T Consensus 5 ~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~I-~~Igis~~ 83 (506)
T 3h3n_X 5 NYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAI-AGIGITNQ 83 (506)
T ss_dssp CEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGE-EEEEEEEC
T ss_pred CEEEEEEcCCCceEEEEECCCCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhhe-EEEEeeCC
Confidence 3578999999999999999 88764433333331 11 11122467899999999999998766543333 67777764
No 45
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.86 E-value=0.016 Score=65.97 Aligned_cols=74 Identities=11% Similarity=0.208 Sum_probs=51.6
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEec--CCC-cccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPI--SPE-IMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP 114 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~I--p~e-~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP 114 (828)
.||+||+|+|++|+++++ +|+.+...+..++. |.. ...-+++++++.+.+++++.+++.+.....+ .|+++|-|
T Consensus 27 ~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~~I-~~Igis~~ 104 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGNQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGITANDI-AAIGITNQ 104 (520)
T ss_dssp EEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGGGE-EEEEEEEC
T ss_pred eEEEEEeCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcccE-EEEEEeCC
Confidence 578999999999999999 88764433333332 211 1122467899999999999998765443333 67777776
No 46
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=95.72 E-value=0.022 Score=64.25 Aligned_cols=72 Identities=6% Similarity=0.011 Sum_probs=49.5
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCc-----ccCCccchHHHHHHHHHHHHhhc--cCCCCccceEEEE
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEI-----MTGPGEQLFDYIAESLENFVREQ--KAENEHLPLGFTF 111 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~-----~~g~~~~lFd~IA~~i~~fl~e~--~~~~~~l~LGftF 111 (828)
.||+||+|||++|+++++ +|+.....+ .+.|... ..-+.+++++.+.+++.+.+++. +.....+ .|+++
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~i~~~~~--~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~~~i-~~Igi 81 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELNIVHSNN--LNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYTSVII-KCIGI 81 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCCEEEEEE--EECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSSSCEE-EEEEE
T ss_pred EEEEEEeCCcceEEEEECCCCCEEEEEE--EeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCCccce-EEEEE
Confidence 478999999999999999 887533333 3333211 11246789999999999998875 4333333 67777
Q ss_pred ecc
Q psy4666 112 SFP 114 (828)
Q Consensus 112 SFP 114 (828)
|.|
T Consensus 82 s~~ 84 (503)
T 2w40_A 82 TNQ 84 (503)
T ss_dssp EEC
T ss_pred cCC
Confidence 776
No 47
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.64 E-value=0.022 Score=64.34 Aligned_cols=74 Identities=12% Similarity=0.309 Sum_probs=50.7
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEec--CCC-cccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPI--SPE-IMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP 114 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~I--p~e-~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP 114 (828)
.+||||+|+|++|+++++ +|+.+...+..++. |.. ...-+++++++.+.+++++.+++.+.....+ .|+++|-+
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~I-~~Igis~~ 84 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVRADQI-AGIGITNQ 84 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGGGE-EEEEEEEC
T ss_pred EEEEEEeCccceEEEEEcCCCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcccE-EEEEEECC
Confidence 478999999999999999 88764433333332 111 1122467899999999999998766543333 67777753
No 48
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.58 E-value=0.023 Score=64.53 Aligned_cols=76 Identities=12% Similarity=0.230 Sum_probs=52.3
Q ss_pred cccccEEEEEeCCceEEEEEEE-eCceeEEEEEEEec--CCC-cccCCccchHHHHHHHHHHHHhhccCCCCccceEEEE
Q psy4666 36 TETGKFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPI--SPE-IMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTF 111 (828)
Q Consensus 36 ~E~G~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~I--p~e-~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftF 111 (828)
+|+..|||||+|.|+.|+++++ +|+.+...+..|+. |.. ...-+++++++.+.+++.+.+++.+...+.+ .|++|
T Consensus 1 tekkYvlgID~GTss~Ka~l~d~~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~~~I-~aIgi 79 (526)
T 3ezw_A 1 TEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQI-AAIGI 79 (526)
T ss_dssp --CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGE-EEEEE
T ss_pred CCceEEEEEEccccceeeeEEcCCCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhhE-EEEEE
Confidence 4666678999999999999999 88865444444442 211 1112466899999999999999887654443 56666
Q ss_pred e
Q psy4666 112 S 112 (828)
Q Consensus 112 S 112 (828)
|
T Consensus 80 s 80 (526)
T 3ezw_A 80 T 80 (526)
T ss_dssp E
T ss_pred e
Confidence 5
No 49
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.53 E-value=0.025 Score=63.61 Aligned_cols=74 Identities=14% Similarity=0.250 Sum_probs=50.4
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEec--CCC-cccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPI--SPE-IMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP 114 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~I--p~e-~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP 114 (828)
.+||||+|||++|+++++ +|+.+...+..++. |.. ...-+++++++.+.+++++.+++.+.....+ .|+++|.|
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~i-~~Igis~~ 81 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPNQI-AAIGVTNQ 81 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGGE-EEEEEEEC
T ss_pred EEEEEecCCchhEEEEECCCCCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcccE-EEEEEecC
Confidence 478999999999999999 88753333333321 111 1111457899999999999988765433333 67888877
No 50
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=95.50 E-value=0.022 Score=65.11 Aligned_cols=74 Identities=12% Similarity=0.301 Sum_probs=49.9
Q ss_pred ccEEEEEeCCceEEEEEEE-eCceeEEEEEEEec--C-CCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEec
Q psy4666 39 GKFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPI--S-PEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSF 113 (828)
Q Consensus 39 G~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~I--p-~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSF 113 (828)
..+|+||+|+|++|+++++ +|+.+...+..+++ | +....-+++++++.+.+++++.+++.+.....+ .|+++|-
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~~~I-~~Igis~ 82 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQV-KGLGFDA 82 (554)
T ss_dssp CEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCGGGE-EEEEEEE
T ss_pred cEEEEEEECcccEEEEEECCCCCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCCCHhHE-EEEEEcC
Confidence 3578999999999999999 88764433333321 1 111222467899999999999998766543333 4555553
No 51
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.45 E-value=0.028 Score=63.49 Aligned_cols=72 Identities=17% Similarity=0.215 Sum_probs=50.4
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCc-----ccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEec
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEI-----MTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSF 113 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~-----~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSF 113 (828)
.+||||+|+|++|+++++ +|+.+...+ .+.|... ..-+.+++++.+.+++.+.+++.+..... ..|+++|.
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~i~~~~~--~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~-i~~Igis~ 79 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGEIYSTGQ--LEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTHED-IAAVGITN 79 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSCEEEEEE--EECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGG-EEEEEEEE
T ss_pred EEEEEecCCcceEEEEECCCCCEEEEEE--EecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCccc-EEEEEEeC
Confidence 478999999999999999 887543333 3333221 11245789999999999998876543333 36788887
Q ss_pred c
Q psy4666 114 P 114 (828)
Q Consensus 114 P 114 (828)
|
T Consensus 80 ~ 80 (504)
T 2d4w_A 80 Q 80 (504)
T ss_dssp C
T ss_pred C
Confidence 7
No 52
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=95.31 E-value=0.57 Score=48.03 Aligned_cols=35 Identities=3% Similarity=-0.059 Sum_probs=24.3
Q ss_pred EEEechHHHHHhcccCCCCcEEEEEEcccccceee
Q psy4666 239 AILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYV 273 (828)
Q Consensus 239 AVvNDTVaTLLaeay~~~~~~IGLILGTGtNacYi 273 (828)
..+|...|.+++..+..+....-+.+|.|+.-+.+
T Consensus 75 ~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~ 109 (276)
T 4ehu_A 75 KQISELSCHARGVNFIIPETRTIIDIGGQDAKVLK 109 (276)
T ss_dssp EECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEE
T ss_pred cccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEE
Confidence 56788888888887776666666666666555443
No 53
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=95.29 E-value=0.094 Score=54.46 Aligned_cols=46 Identities=17% Similarity=0.382 Sum_probs=30.6
Q ss_pred cEEEEEeCCceEEEEEEEeCceeEEEEEEEecCCCcccCCccchHHHHHHH
Q psy4666 40 KFLALDLGGTNFRVLMIYAGEKFRMEHKTYPISPEIMTGPGEQLFDYIAES 90 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~ 90 (828)
.+|+||+|+||++++++++++. ...|.+|++... +.++++..+.+.
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~l----~~~~r~~T~~~~-t~de~~~~l~~l 49 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGKT----FRRWRLSTGVFQ-TEDELFSHLHPL 49 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSSS----CEEEEEECCTTC-CHHHHHHHHHHH
T ss_pred eEEEEEECCCeEEEEEEECCEE----EEEEEecCCCCC-CHHHHHHHHHHH
Confidence 4799999999999999985554 334666665433 345555554443
No 54
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.18 E-value=0.038 Score=62.65 Aligned_cols=72 Identities=8% Similarity=0.113 Sum_probs=48.9
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEec--CC-CcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEec
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPI--SP-EIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSF 113 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~I--p~-e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSF 113 (828)
.+||||+|+|++|+++++ +|+.+...+..+++ |. ....-+++++++.+.+++++.+ +.+.....+ .|+++|-
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~~~~~~~I-~~Igis~ 81 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDARRV-SAIVLSG 81 (511)
T ss_dssp EEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TTTCCGGGE-EEEEEEE
T ss_pred EEEEEEeCCCceEEEEECCCCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hcCCChhHe-EEEEEec
Confidence 578999999999999999 88764444444432 11 1122246789999999999988 554333333 5676665
No 55
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.10 E-value=0.046 Score=61.26 Aligned_cols=72 Identities=11% Similarity=0.253 Sum_probs=48.8
Q ss_pred EEEEEeCCceEEEEEEE-eCceeEEEEEEEec--CCC-cccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEeccc
Q psy4666 41 FLALDLGGTNFRVLMIY-AGEKFRMEHKTYPI--SPE-IMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFPV 115 (828)
Q Consensus 41 fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~I--p~e-~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFPv 115 (828)
|||||+|||++|+++++ +|+.+...+..+++ |+. ...-+++++++.+.+++++.+++.. ... ..|+++|.|.
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~--~~~-i~~Igis~~~ 77 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHS--LQD-VKALGIAGQM 77 (484)
T ss_dssp EEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSC--CTT-CCEEEEEECS
T ss_pred EEEEEecCcccEEEEECCCCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhCC--ccc-eEEEEEcCCc
Confidence 78999999999999999 88764443333332 111 1112467899999999999887642 122 3577777774
No 56
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=94.72 E-value=0.053 Score=61.30 Aligned_cols=70 Identities=16% Similarity=0.279 Sum_probs=48.1
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEec--CC-CcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEec
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPI--SP-EIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSF 113 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~I--p~-e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSF 113 (828)
.||+||+|+|++|+++++ +|+.+...+..++. |. ....-+++++++.+.+++++.+++.+ .. ..|+++|-
T Consensus 5 ~~lgIDiGtts~K~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~---~~-I~~Igis~ 78 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID---GK-IAAISWSS 78 (504)
T ss_dssp EEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTCS---SE-EEEEEEEE
T ss_pred EEEEEEecCCceEEEEEcCCCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhCC---CC-eEEEEEEC
Confidence 578999999999999999 88765444444432 11 11122467899999999999887754 22 25666665
No 57
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=94.25 E-value=0.083 Score=60.67 Aligned_cols=73 Identities=15% Similarity=0.305 Sum_probs=47.5
Q ss_pred cEEEEEeCCceEEEEEEE--eCceeEEEEEEEe-------cCC-------CcccCCccchHHHHHHHHHHHHhhccCCCC
Q psy4666 40 KFLALDLGGTNFRVLMIY--AGEKFRMEHKTYP-------ISP-------EIMTGPGEQLFDYIAESLENFVREQKAENE 103 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~--~G~~~~~~~~~~~-------Ip~-------e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~ 103 (828)
.|||||+|+|++|+++++ +|+.+...+..|+ .|. ....-+++++++.+.+++++.+++.+....
T Consensus 6 ~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~~~~~~~ 85 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKESGVDAD 85 (572)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC---CCS
T ss_pred EEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChh
Confidence 578999999999999998 6765443333343 111 111223557899999999999988765443
Q ss_pred ccceEEEEec
Q psy4666 104 HLPLGFTFSF 113 (828)
Q Consensus 104 ~l~LGftFSF 113 (828)
.+ .|++||.
T Consensus 86 ~I-~~Igis~ 94 (572)
T 3jvp_A 86 DV-IGIGVDF 94 (572)
T ss_dssp CE-EEEEEEE
T ss_pred HE-EEEEEec
Confidence 33 6777776
No 58
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=93.58 E-value=0.96 Score=47.48 Aligned_cols=51 Identities=14% Similarity=0.247 Sum_probs=33.6
Q ss_pred EEEEEeCCceEEEEEEEeCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccC
Q psy4666 41 FLALDLGGTNFRVLMIYAGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKA 100 (828)
Q Consensus 41 fLalDLGGTn~Rv~lV~~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~ 100 (828)
+|+||+|+||++++++++++. ...|.++++... +.+ .....+.++++.++.
T Consensus 2 lL~IDIGNT~ik~gl~~~~~l----~~~~r~~T~~~~-t~d----e~~~~l~~ll~~~~~ 52 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGEL----RQHWRMETDRHK-TED----EYGMLVKQLLEHEGL 52 (268)
T ss_dssp EEEEEECSSEEEEEEEETTEE----EEEEEEECCTTC-CHH----HHHHHHHHHHHHTTC
T ss_pred EEEEEECcCcEEEEEEECCEE----EEEEEecCCCcC-CHH----HHHHHHHHHHHHcCC
Confidence 689999999999999986544 345666655332 233 445555666665553
No 59
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=92.49 E-value=0.17 Score=57.29 Aligned_cols=68 Identities=12% Similarity=0.063 Sum_probs=44.1
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEec-C-CCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPI-S-PEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP 114 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~I-p-~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP 114 (828)
.||+||+|+|+.|+++++ +|+.....+..+++ | +....-+++++++.+.+++++.+ +. . ..|+++|-+
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~-~~-----~-I~aIgis~~ 77 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA-DH-----P-VTTIVPVGH 77 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTSCEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT-TS-----C-CCEEEEEEC
T ss_pred eEEEEEcCCCCeEEEEEECCCcEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH-hc-----C-CCEEEEecC
Confidence 578999999999999999 88764433333332 1 11111246778999999988876 31 1 256666665
No 60
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=91.68 E-value=0.41 Score=53.53 Aligned_cols=56 Identities=18% Similarity=0.150 Sum_probs=35.3
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEe--------cCCCcccCCccchHHHHHHHHHHHHh
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYP--------ISPEIMTGPGEQLFDYIAESLENFVR 96 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~--------Ip~e~~~g~~~~lFd~IA~~i~~fl~ 96 (828)
.|||||+|||++|+++++ +|+........+. -|.... -+.+++++.+.+++++...
T Consensus 5 ~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~g~~e-~d~~~~~~~i~~~~~~~~~ 69 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVT-WDVDSLESAIRLGLNKVCA 69 (489)
T ss_dssp EEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEETTEEE-CCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccCCeEE-ECHHHHHHHHHHHHHHHHh
Confidence 589999999999999999 7763322222211 111111 1345778888888777654
No 61
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=85.70 E-value=1.7 Score=49.36 Aligned_cols=66 Identities=11% Similarity=0.050 Sum_probs=41.7
Q ss_pred cEEEEEeCCceEEEEEEE--eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCCccceEEEEecc
Q psy4666 40 KFLALDLGGTNFRVLMIY--AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENEHLPLGFTFSFP 114 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~--~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~~l~LGftFSFP 114 (828)
.+|+||+|+|++|+++++ +|+.+.. ...+.|..... +++++++.+.+++++ .+.. .. ..|+++|-.
T Consensus 6 ~~lgIDiGtts~ka~l~d~~~G~i~~~--~~~~~~g~~e~-d~~~~~~~i~~~l~~----~~~~-~~-I~~Igis~q 73 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTDAETGELVRF--GQAKHPNGTSV-DPSYWWSAFQEAAEQ----AGGL-DD-VSALAVGGQ 73 (515)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEE--EEEECCSSSEE-CTHHHHHHHHHHHHH----TTCS-TT-EEEEEEEEC
T ss_pred EEEEEEeccccEEEEEEECCCCeEEEE--EEEeCCCCceE-CHHHHHHHHHHHHHh----cCCc-cC-ceEEEEeCC
Confidence 578999999999999999 6765332 23344533222 456777777776654 2221 22 356777764
No 62
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=85.27 E-value=0.85 Score=50.79 Aligned_cols=53 Identities=9% Similarity=0.065 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEEcCceeecchhHHHHHHHHHHh
Q psy4666 412 YLCRVVSQRSAHLASAGIATLLNRM-DFSIVTVGVDGSVYRYHPYFHHMMLEKIPA 466 (828)
Q Consensus 412 ~Ic~aV~~RAA~LlAAgLAAIl~~l-~~~~ItVGvDGSVy~~~p~f~~~L~e~lre 466 (828)
+-|+.+++-.++-++-.|.+....+ +++.|+++ ||+-++.+.+++++.+.+.-
T Consensus 297 ~~A~la~d~f~yriak~Iga~aa~LG~vDaIVfT--GGIgEns~~vr~~I~~~l~~ 350 (398)
T 4ijn_A 297 EHAKLAYDVYIHRLRKYIGAYMAVLGRTDVISFT--AGVGENVPPVRRDALAGLGG 350 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSCCEEEEE--HHHHHHCHHHHHHHHTTCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEC--CccccccHHHHHHHHHHHhh
Confidence 3344443333333444444444444 67788888 99999988888887665543
No 63
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=82.48 E-value=20 Score=36.11 Aligned_cols=23 Identities=17% Similarity=0.265 Sum_probs=18.9
Q ss_pred ccEEEEEeCCceEEEEEEE-eCce
Q psy4666 39 GKFLALDLGGTNFRVLMIY-AGEK 61 (828)
Q Consensus 39 G~fLalDLGGTn~Rv~lV~-~G~~ 61 (828)
..|++||+|.+++|+++++ +++.
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~~~~~ 51 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQEGIP 51 (272)
T ss_dssp CCEEEEECCSSEEEEEEECTTCCE
T ss_pred CEEEEEEcccceEEEEEECCCCcE
Confidence 3578999999999999887 5543
No 64
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=80.50 E-value=2.2 Score=48.57 Aligned_cols=38 Identities=24% Similarity=0.199 Sum_probs=28.7
Q ss_pred CccEEEEEechHHHHHhcccCCCCcEEEEEEcccccceee
Q psy4666 234 PVNVVAILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYV 273 (828)
Q Consensus 234 ~V~vvAVvNDTVaTLLaeay~~~~~~IGLILGTGtNacYi 273 (828)
.+.|++-.-|+.+++++.. . ....+.+++||+.-....
T Consensus 273 g~pV~~g~~D~~aa~~g~~-~-~~g~~~~s~GTs~~~~~~ 310 (538)
T 4bc3_A 273 GCKVVAFTGDNPASLAGMR-L-EEGDIAVSLGTSDTLFLW 310 (538)
T ss_dssp TCEEECCEEHHHHHHHHTT-C-CTTCEEEEESSSEEEEEE
T ss_pred CCeEEEecccHHhhhhccc-c-CCCcEEEEeccchheEEe
Confidence 4667889999999999984 3 456788899998544443
No 65
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=78.61 E-value=0.92 Score=52.49 Aligned_cols=54 Identities=13% Similarity=0.080 Sum_probs=35.2
Q ss_pred HHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccCC-C--CcEEEEEEcccccceeecc
Q psy4666 219 VVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDH-K--HCKIGVIVGTGFNACYVER 275 (828)
Q Consensus 219 Vv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~~-~--~~~IGLILGTGtNacYiE~ 275 (828)
-.+.+.+|...-| + +++.++|+..|++++..... . ...+-+=+|.||--.-+..
T Consensus 150 qr~a~~~Aa~~AG-l--~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~ 206 (605)
T 4b9q_A 150 QRQATKDAGRIAG-L--EVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIE 206 (605)
T ss_dssp HHHHHHHHHHHTT-C--EEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHHHcC-C--ceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEE
Confidence 4567778776665 4 56899999999999875543 2 2333444676665444433
No 66
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=76.84 E-value=4.1 Score=43.95 Aligned_cols=52 Identities=12% Similarity=0.111 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccCC---C--CcEEEEEEcccccceee
Q psy4666 219 VVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDH---K--HCKIGVIVGTGFNACYV 273 (828)
Q Consensus 219 Vv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~~---~--~~~IGLILGTGtNacYi 273 (828)
-.+.+++|..+-| + +++.++|+..|++++..... . ...+-+=+|-||--..+
T Consensus 165 ~r~~~~~a~~~AG-l--~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv 221 (409)
T 4gni_A 165 QKAALIAAAAAAD-L--EVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTV 221 (409)
T ss_dssp HHHHHHHHHHHTT-C--EEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEE
T ss_pred HHHHHHHHHHHcC-C--CeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEE
Confidence 4567888887665 4 57999999999999886642 2 22333335666554433
No 67
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=76.39 E-value=7.2 Score=41.39 Aligned_cols=63 Identities=11% Similarity=0.260 Sum_probs=41.8
Q ss_pred cEEEEEeCCceEEEEEEEeCceeEE-EEEEEecCCCcccCCccchHHHHHHHHHHHHhhccCCCC
Q psy4666 40 KFLALDLGGTNFRVLMIYAGEKFRM-EHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKAENE 103 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~~G~~~~~-~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~~~~ 103 (828)
.++|||+|.|++|++.+++|+ +++ .....++|...+....-.=.+.+++.|++++++.+...+
T Consensus 14 ~~vgiDiGt~~i~~~~~~~~~-~~i~~~g~~~~ps~~~~~g~i~d~~~~~~~ik~~~~~~~~~~~ 77 (377)
T 2ych_A 14 EALGLEIGASALKLVEVSGNP-PALKALASRPTPPGLLMEGMVAEPAALAQEIKELLLEARTRKR 77 (377)
T ss_dssp CCEEEEECSSEEEEEEEETTT-TEEEEEEEEECCTTSEETTEESCHHHHHHHHHHHHHHHTCCCC
T ss_pred ceEEEEeCCCeEEEEEEeCCc-eEEEEEEeEECCCCcccCCCcCCHHHHHHHHHHHHHHcCCCcc
Confidence 478999999999999887443 233 234566787655422222256788888888887665443
No 68
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=75.41 E-value=5.8 Score=41.08 Aligned_cols=67 Identities=18% Similarity=0.087 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEEcCceeecchhHHHHHHHHHHhh--cccceeeecccchhhhh
Q psy4666 408 IDVRYLCRVVSQRSAHLASAGIATLLNRMD-FSIVTVGVDGSVYRYHPYFHHMMLEKIPAL--ISHSVIVGTGFNACYVE 484 (828)
Q Consensus 408 ~~vr~Ic~aV~~RAA~LlAAgLAAIl~~l~-~~~ItVGvDGSVy~~~p~f~~~L~e~lreL--~p~~~i~GtG~nAAyv~ 484 (828)
...+.+++.|..+. +.++...+ ++.+++. ||+.+ .|.+++.+.+.+..- .|...-..+..|||+.+
T Consensus 186 di~~av~e~Va~~i--------~~~~~~~~~~~~i~~~--GG~a~-n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A 254 (270)
T 1hux_A 186 DIIAGIHRSVASRV--------IGLANRVGIVKDVVMT--GGVAQ-NYGVRGALEEGLGVEIKTSPLAQYNGALGAALYA 254 (270)
T ss_dssp HHHHHHHHHHHHHH--------HHHHHTTCCCSSEEEE--SGGGG-CHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--------HHHHhcCCCCCeEEEe--Ccccc-CHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHH
Confidence 45555666665553 23344444 3556665 88764 788888887777431 12211113677888876
Q ss_pred c
Q psy4666 485 R 485 (828)
Q Consensus 485 ~ 485 (828)
.
T Consensus 255 ~ 255 (270)
T 1hux_A 255 Y 255 (270)
T ss_dssp H
T ss_pred H
Confidence 4
No 69
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=72.28 E-value=1.6 Score=46.52 Aligned_cols=49 Identities=16% Similarity=0.221 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccC-CCCcEEEEE--Ecccccc
Q psy4666 219 VVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD-HKHCKIGVI--VGTGFNA 270 (828)
Q Consensus 219 Vv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~-~~~~~IGLI--LGTGtNa 270 (828)
-.+.+.+|..+-| + +++.++|+..|++++.... ......-++ +|-||--
T Consensus 168 ~r~~~~~a~~~aG-l--~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~d 219 (394)
T 3qfu_A 168 QRQATKDAGTIAG-L--NVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFD 219 (394)
T ss_dssp HHHHHHHHHHHTT-C--EEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEE
T ss_pred HHHHHHHHHHHcC-C--ceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCcee
Confidence 4567777776555 4 5789999999999987443 222222233 5555553
No 70
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=69.81 E-value=1.4 Score=47.30 Aligned_cols=53 Identities=17% Similarity=0.186 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccCCC------CcEEEEEEcccccceeec
Q psy4666 219 VVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHK------HCKIGVIVGTGFNACYVE 274 (828)
Q Consensus 219 Vv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~~~------~~~IGLILGTGtNacYiE 274 (828)
-.+.+++|..+-| + +++.++|+..|++++...... ...+-+=+|-||--..+.
T Consensus 173 ~r~~~~~a~~~AG-l--~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~ 231 (404)
T 3i33_A 173 QRQATKDAGTITG-L--NVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSIL 231 (404)
T ss_dssp HHHHHHHHHHHHT-C--EEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEE
T ss_pred HHHHHHHHHHHcC-C--CeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEE
Confidence 4567788876666 4 579999999999998755432 223333356665544433
No 71
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=67.43 E-value=1.8 Score=49.50 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=23.9
Q ss_pred HHHHHHHHHhcCCCCccEEEEEechHHHHHhcccC
Q psy4666 220 VELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD 254 (828)
Q Consensus 220 v~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~ 254 (828)
.+.+.+|...-| ++++.++|+..|++++....
T Consensus 155 r~a~~~A~~~AG---l~~~~li~EP~AAAlay~~~ 186 (554)
T 1yuw_A 155 RQATKDAGTIAG---LNVLRIINEPTAAAIAYGLD 186 (554)
T ss_dssp HHHHHHHHHTTT---CEEEEEEEHHHHHHHHTTCS
T ss_pred HHHHHHHHHHcC---CCeEEEeCcHHHHHHHHHhh
Confidence 556777775544 45799999999999987554
No 72
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=56.17 E-value=3.2 Score=47.96 Aligned_cols=48 Identities=15% Similarity=0.166 Sum_probs=30.8
Q ss_pred HHHHHHHHHhcCCCCccEEEEEechHHHHHhcccCCC-CcEEEEE--Ecccccc
Q psy4666 220 VELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHK-HCKIGVI--VGTGFNA 270 (828)
Q Consensus 220 v~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~~~-~~~IGLI--LGTGtNa 270 (828)
.+.+.+|...-| ++++.++|+..|++++...... .....++ +|-||--
T Consensus 151 r~a~~~A~~~AG---l~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~D 201 (605)
T 2kho_A 151 RQATKDAGRIAG---LEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFD 201 (605)
T ss_dssp HHHHHHHHHTTT---CEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEE
T ss_pred HHHHHHHHHHcC---CceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEE
Confidence 466777765444 4579999999999998765432 2333344 4555543
No 73
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=53.86 E-value=7 Score=46.00 Aligned_cols=31 Identities=26% Similarity=0.170 Sum_probs=23.3
Q ss_pred HHHHHHHHHhcCCCCccEEEEEechHHHHHhccc
Q psy4666 220 VELLQQALVRRSNFPVNVVAILNDTAGCLVSCAY 253 (828)
Q Consensus 220 v~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay 253 (828)
.+.+.+|...-| + +++.++|+..|++++...
T Consensus 154 R~a~~~Aa~~AG-l--~~~~li~EP~AAAlaygl 184 (675)
T 3d2f_A 154 RYNIADAARIAG-L--NPVRIVNDVTAAGVSYGI 184 (675)
T ss_dssp HHHHHHHHHHTT-C--EEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-C--ceEEEEcchHHHHHHHhh
Confidence 556677775555 4 579999999999998643
No 74
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=46.94 E-value=2.2e+02 Score=29.85 Aligned_cols=30 Identities=20% Similarity=0.130 Sum_probs=23.5
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCC
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISP 73 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~ 73 (828)
..|+||+|=||+++++++ +++. ...|.+++
T Consensus 24 M~L~IDiGNT~ik~g~~~~~~~~----~~~~r~~t 54 (271)
T 2f9w_A 24 MILELDCGNSLIKWRVIEGAARS----VAGGLAES 54 (271)
T ss_dssp EEEEEEECSSCEEEEEEETTTEE----EEEEEESS
T ss_pred cEEEEEeCCCeeEEEEEeCCCEE----EEEEEecC
Confidence 589999999999999998 6654 34566665
No 75
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=45.75 E-value=38 Score=38.01 Aligned_cols=45 Identities=13% Similarity=0.169 Sum_probs=29.4
Q ss_pred HHHHHHHHHhcCCCCccEEEEEechHHHHHhcccCCCCcEEEEEEccc
Q psy4666 220 VELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHKHCKIGVIVGTG 267 (828)
Q Consensus 220 v~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~~~~~~IGLILGTG 267 (828)
.+.+.+|...-| ++++.++|...|++++...........+++.-|
T Consensus 125 r~a~~~a~~~AG---l~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~G 169 (509)
T 2v7y_A 125 RQATKDAGRIAG---LEVERIINEPTAAALAYGLDKEEDQTILVYDLG 169 (509)
T ss_dssp HHHHHHHHHHTT---CEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEEC
T ss_pred HHHHHHHHHHcC---CCeEEEecCHHHHHHHHhhccCCCCEEEEEECC
Confidence 456677765554 457999999999999876543333444454444
No 76
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=41.27 E-value=1.8e+02 Score=31.00 Aligned_cols=44 Identities=16% Similarity=0.180 Sum_probs=30.1
Q ss_pred EEEEEcCceeecchhHHHHHHHHHHhhccc---ceee-------ecccchhhhhccc
Q psy4666 441 VTVGVDGSVYRYHPYFHHMMLEKIPALISH---SVIV-------GTGFNACYVERTE 487 (828)
Q Consensus 441 ItVGvDGSVy~~~p~f~~~L~e~lreL~p~---~~i~-------GtG~nAAyv~~~~ 487 (828)
|++. ||- ...|.|.+++++.++.+.|. +.|. .+..|+++++..+
T Consensus 297 IvLt--GG~-s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~l~ 350 (375)
T 2fxu_A 297 NVMS--GGT-TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 350 (375)
T ss_dssp EEEE--SGG-GCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHCG
T ss_pred cEee--CCC-CCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhCcc
Confidence 5554 554 34799999999999988874 3332 5666777776643
No 77
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=35.11 E-value=4.8e+02 Score=28.50 Aligned_cols=51 Identities=12% Similarity=0.071 Sum_probs=33.1
Q ss_pred ccHHHHHHHHHHhcCCCCccEEEEEechHHHHHhcccCCC--CcEEEEEEcccccc
Q psy4666 217 ANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHK--HCKIGVIVGTGFNA 270 (828)
Q Consensus 217 ~DVv~LLqeAL~rrg~l~V~vvAVvNDTVaTLLaeay~~~--~~~IGLILGTGtNa 270 (828)
++.++-+.+++.+-| ++ +..++|...|++++....+. ...+-+=+|-||-.
T Consensus 167 ~~~v~n~~~~~~~AG-L~--v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttd 219 (419)
T 4a2a_A 167 LKVYEMFYNFLQDTV-KS--PFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTG 219 (419)
T ss_dssp HHHHHHHHHHHHTTS-CS--CEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEE
T ss_pred HHHHHHHHHHHHHcC-Cc--EEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEE
Confidence 347788888887666 55 58999999998876532211 13344447777654
No 78
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=32.99 E-value=27 Score=38.82 Aligned_cols=45 Identities=11% Similarity=0.149 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHH
Q psy4666 416 VVSQRSAHLASAGIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIP 465 (828)
Q Consensus 416 aV~~RAA~LlAAgLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lr 465 (828)
+...|-++++|+-.+++ . +.+.++.. ||+-++.+.+++++.+.+.
T Consensus 296 ~f~yri~k~Iga~aa~L-g--~vDaIVfT--GGIgens~~vR~~i~~~l~ 340 (391)
T 3r9p_A 296 VFTHRLRKYIGAYLAVL-G--HTDVISFT--AGIGENDAAVRRDAVSGME 340 (391)
T ss_dssp HHHHHHHHHHHHHHHHH-S--SCCEEEEE--HHHHHHCHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHh-C--CCCEEEEC--cccccCCHHHHHHHHHHHH
Confidence 34556666666554443 3 55667776 9999988888887766553
No 79
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=32.28 E-value=92 Score=30.15 Aligned_cols=57 Identities=11% Similarity=0.098 Sum_probs=35.6
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEE-EEEEEecCCCcccCCccchHHHHHHHHHHHHhhccC
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRM-EHKTYPISPEIMTGPGEQLFDYIAESLENFVREQKA 100 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~-~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl~e~~~ 100 (828)
..|+||.|-++.=.++++ +|...+. .......+ . . +..+=+..|.+.|.++++++..
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~~~~~v~~G~i~t~-~--~-~~~~Rl~~i~~~l~~~i~~~~P 60 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTK-V--D-DLPSRLKLIYAGVTEIITQFQP 60 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECC-C--S-CHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEccCCCCeeEEEEEecCCeEEEEEeeEEECC-C--C-CHHHHHHHHHHHHHHHHHHcCC
Confidence 368999999999999999 7765443 33444444 2 1 2222335555666666666653
No 80
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=31.62 E-value=36 Score=36.95 Aligned_cols=52 Identities=17% Similarity=0.253 Sum_probs=32.8
Q ss_pred cEEEEEeCCceEEEEEEE-eCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHHH
Q psy4666 40 KFLALDLGGTNFRVLMIY-AGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENFV 95 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~-~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~fl 95 (828)
.|+|+|=|.||||+-+++ +|+. .....-+..++.-....|-.-+.+.+.++.
T Consensus 8 ~~IavDWGTSnlRa~l~~~~g~v----l~~~~~~~Gv~~~~~~~f~~~l~~l~~~w~ 60 (330)
T 3t69_A 8 YYAAVDWGTSSFRLWIIGEDGAV----LAERRSAEGMTTAAKTGFHTILDGHLAAVS 60 (330)
T ss_dssp CEEEEEECSSCEEEEEECTTSCE----EEEEEESCCHHHHHHHCHHHHHHHHHHHTT
T ss_pred CEEEEEecchheehheecCCCCc----hhhhcCCcchhhcCcccHHHHHHHHHHHhh
Confidence 589999999999999998 7765 223344444443223344455555555554
No 81
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=30.49 E-value=30 Score=37.65 Aligned_cols=60 Identities=8% Similarity=-0.041 Sum_probs=38.8
Q ss_pred HHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEcCc
Q psy4666 387 SICRNVLYQRLALPHATAQDCIDVRYLCRVVSQRSAHLASAGIATLLNRMDFSIVTVGVDGS 448 (828)
Q Consensus 387 ~~~~~il~~~lgl~~~s~ed~~~vr~Ic~aV~~RAA~LlAAgLAAIl~~l~~~~ItVGvDGS 448 (828)
..+..-|...++.+ ...-.....+.+|+.+.++..+.+..++..++.+.+-.+ +|+++||
T Consensus 226 ~~~~~RLAr~vg~D-~~~~~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~~~-vv~aG~G 285 (334)
T 3cet_A 226 RSSLVRISKVLCSD-LDQISEIDAENIAKNYYELWKELILENVENVAEKYGSKK-VVITGLG 285 (334)
T ss_dssp HHHHHHHHHTTTCC-TTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEESTT
T ss_pred HHHHHHHHHHhCCC-hhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe-EEEeCCc
Confidence 34444444455544 222234557889999999999999999999987754443 4444454
No 82
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=29.86 E-value=56 Score=34.95 Aligned_cols=51 Identities=20% Similarity=0.310 Sum_probs=30.9
Q ss_pred cEEEEEeCCceEEEEEEEeCceeEEEEEEEecCCCcccCCccchHHHHHHHHHHH
Q psy4666 40 KFLALDLGGTNFRVLMIYAGEKFRMEHKTYPISPEIMTGPGEQLFDYIAESLENF 94 (828)
Q Consensus 40 ~fLalDLGGTn~Rv~lV~~G~~~~~~~~~~~Ip~e~~~g~~~~lFd~IA~~i~~f 94 (828)
.|+|+|=|.||||+-++++|+. .....-|..++.-+...|=.-+.+.+.++
T Consensus 7 ~~IavDWGTs~lRa~l~~~g~v----l~~~~~~~Gv~~~~~~~f~~~l~~~~~~w 57 (295)
T 3nuw_A 7 RYIAIDWGSTNLRAWLYQGEEC----LESRQSEAGVTRLNGRSPAAVLAEITQHW 57 (295)
T ss_dssp EEEEEEECSSCEEEEEEETTEE----EEEEEESCCTTCCTTCCHHHHHHHHTTTT
T ss_pred cEEEEEecchheeeeeecCCce----ehhhcCCCchhhcCcccHHHHHHHHHHHh
Confidence 5899999999999998886654 22333344444333344444455545444
No 83
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=26.08 E-value=90 Score=36.74 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=36.1
Q ss_pred EEechHHHHHhcccCCCCcEEEEEEcccccceeecccccccc----CCCCCCCCcEEEecCCCccCCCCccc
Q psy4666 240 ILNDTAGCLVSCAYDHKHCKIGVIVGTGFNACYVERTENVST----FENEANKPFVVINTEWGAFGDDGALD 307 (828)
Q Consensus 240 VvNDTVaTLLaeay~~~~~~IGLILGTGtNacYiE~~~~i~k----l~gage~G~MiINtEwG~FG~~G~l~ 307 (828)
|-=|++|.++++.....+ .+.|.+.=|||+=.+...+..-. ..|..-+| .|..+|.-...|+.+
T Consensus 353 VGaDi~Ag~la~~~~~~~-~~~L~iDiGTNgEivL~~~~~l~~~S~aAGPAfEG---~~I~~GmrA~~GAI~ 420 (631)
T 3zyy_X 353 VGGDITSGVLYTGLANSD-EITLFIDIGTNGEMVLGNKDWLVTCACSAGPAFEG---SGIKHGMRAMQGAIE 420 (631)
T ss_dssp BCHHHHHHHHHHTTTSCS-SCEEEEECSSEEEEEEECSSCEEEEEEECCGGGGT---TTSSSBCCSSTTEEE
T ss_pred ccHHHHHHHHhcCcccCC-CCEEEEEcCCCeEEEEeeCCEEEEEeccCchhhcc---ccccCCccCCCCceE
Confidence 345788888877554322 46788899999977765331100 01100011 245667777777665
No 84
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=25.32 E-value=41 Score=35.66 Aligned_cols=53 Identities=9% Similarity=0.112 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhh
Q psy4666 409 DVRYLCRVVSQRSAHLASAGIATLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPAL 467 (828)
Q Consensus 409 ~vr~Ic~aV~~RAA~LlAAgLAAIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL 467 (828)
....++.+|..|-+.++.. ...+.+-++|+.. ||....+|.+.+.+.+++..+
T Consensus 212 Iaasl~~sV~~~I~~la~~----~a~~~~i~~Vvf~--Gg~l~~n~~l~~~l~~~~~~~ 264 (287)
T 2ews_A 212 KLAAVIGVVGEVVTTMAIT----VAREFKTENIVYI--GSSFHNNALLRKVVEDYTVLR 264 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HHHHTTCCEEEEE--SGGGTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHhCCCCeEEEe--CCchhcCHHHHHHHHHHHhhC
Confidence 4566777777776554321 1223344455554 997778899999998765443
No 85
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=21.46 E-value=97 Score=30.62 Aligned_cols=55 Identities=13% Similarity=0.224 Sum_probs=33.9
Q ss_pred HHHhhcCCCeEEEEEcCceeecchhHHHHHHHHHHhhc--ccceeeecccchhhhhc
Q psy4666 431 TLLNRMDFSIVTVGVDGSVYRYHPYFHHMMLEKIPALI--SHSVIVGTGFNACYVER 485 (828)
Q Consensus 431 AIl~~l~~~~ItVGvDGSVy~~~p~f~~~L~e~lreL~--p~~~i~GtG~nAAyv~~ 485 (828)
..+...+.+.+.+|.+..-.-.||.|-..+-+.+.+-- ..+.|+|||.|.++.+.
T Consensus 41 ~~L~~~G~eV~D~G~~~~~~~dYPd~a~~va~~V~~g~~d~GIliCGTGiG~sIaAN 97 (166)
T 3s5p_A 41 QRASAHGYEVMDLGTESDASVDYPDFAKIGCEAVTSGRADCCILVCGTGIGISIAAN 97 (166)
T ss_dssp HHHHHTTCEEEEEEC--------CHHHHHHHHHHHTTSCSEEEEEESSSHHHHHHHH
T ss_pred HHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCcEEEEEcCCcHHHHHHhh
Confidence 33555666777787654333458888888877775432 24677899999999874
Done!