BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4669
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P46199|IF2M_HUMAN Translation initiation factor IF-2, mitochondrial OS=Homo sapiens
GN=MTIF2 PE=1 SV=2
Length = 727
Score = 109 bits (272), Expect = 6e-24, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 81/130 (62%), Gaps = 7/130 (5%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPT 60
MT+++LA++M + D++YE ++ D ++ S + D I ++I K+GMK
Sbjct: 97 MTIEELARAMEKNTDYVYEALLNTDIDIDSLEADSHL-DEVWIKEVITKAGMKL----KW 151
Query: 61 NSVADDS--NGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFG 118
+ + D KD RRP ADP++L R PVVTIMGHVDHGKTTLLD R T V E G
Sbjct: 152 SKLKQDKVRKNKDAVRRPQADPALLTPRSPVVTIMGHVDHGKTTLLDKFRKTQVAAVETG 211
Query: 119 GITQHIGAFV 128
GITQHIGAF+
Sbjct: 212 GITQHIGAFL 221
>sp|P46198|IF2M_BOVIN Translation initiation factor IF-2, mitochondrial OS=Bos taurus
GN=MTIF2 PE=1 SV=1
Length = 727
Score = 108 bits (270), Expect = 1e-23, Method: Composition-based stats.
Identities = 62/130 (47%), Positives = 82/130 (63%), Gaps = 7/130 (5%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPT 60
MT+++LA++M D D +YE +M ++ S + D I ++I+KSGMK
Sbjct: 97 MTVEELARAMEKDIDCVYESLMNTAIDIDSLETHSRL-DEVWIKEVIKKSGMKL----KW 151
Query: 61 NSVADDS--NGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFG 118
+ + D KD +RP ADP++L+ R PVVTIMGHVDHGKTTLLD LR T V E G
Sbjct: 152 SKLKQDKVRENKDAVKRPQADPALLIPRSPVVTIMGHVDHGKTTLLDKLRKTQVAAMEAG 211
Query: 119 GITQHIGAFV 128
GITQHIGAF+
Sbjct: 212 GITQHIGAFL 221
>sp|Q91YJ5|IF2M_MOUSE Translation initiation factor IF-2, mitochondrial OS=Mus musculus
GN=Mtif2 PE=1 SV=2
Length = 727
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 60/128 (46%), Positives = 79/128 (61%), Gaps = 3/128 (2%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPT 60
MT++DLA +M D D +YE ++ V+ +S + D I ++I+K+GMK
Sbjct: 97 MTVEDLASAMAKDIDCVYEALLNTAIDVDSLEANSHL-DEVWIKEVIKKAGMKLKWSKLK 155
Query: 61 NSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGI 120
++ KD RRP DP++L R PVVT+MGHVDHGKTTLLD LR T V E GGI
Sbjct: 156 QERIREN--KDAVRRPGTDPALLKPRSPVVTVMGHVDHGKTTLLDKLRETQVAAMEVGGI 213
Query: 121 TQHIGAFV 128
TQHIGAF+
Sbjct: 214 TQHIGAFL 221
>sp|B9M1G0|IF2_GEOSF Translation initiation factor IF-2 OS=Geobacter sp. (strain FRC-32)
GN=infB PE=3 SV=1
Length = 908
Score = 89.0 bits (219), Expect = 7e-18, Method: Composition-based stats.
Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 24/133 (18%)
Query: 1 MTLKDLAKSMGVDCDHLYE------VMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKY 54
+T+ +LAK MG+ + L VM +++++++D + + DF I+
Sbjct: 336 ITVGELAKRMGIKANDLIRALMKMGVMATINHALDFDTATILATDFGYEIE--------- 386
Query: 55 MVINPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVK 114
+VA D + ++ P P L+KRPPVVTIMGHVDHGKT+LLD +R T+V+
Sbjct: 387 -------NVALDID--EILESTPDTPESLVKRPPVVTIMGHVDHGKTSLLDAIRQTNVIA 437
Query: 115 SEFGGITQHIGAF 127
E GGITQHIGA+
Sbjct: 438 GEAGGITQHIGAY 450
>sp|Q9KA77|IF2_BACHD Translation initiation factor IF-2 OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=infB PE=3 SV=1
Length = 730
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/49 (77%), Positives = 44/49 (89%)
Query: 79 DPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
DPS+L +RPPVVTIMGHVDHGKTTLLD++RNT V + E GGITQHIGA+
Sbjct: 225 DPSLLKERPPVVTIMGHVDHGKTTLLDSIRNTKVTEGEAGGITQHIGAY 273
>sp|Q39VA6|IF2_GEOMG Translation initiation factor IF-2 OS=Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210) GN=infB PE=3 SV=1
Length = 884
Score = 85.9 bits (211), Expect = 6e-17, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 72/127 (56%), Gaps = 12/127 (9%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPT 60
+T+ +LAK MGV L V+M + + P V D +I + Y + N
Sbjct: 312 ITVGELAKRMGVKATDLIRVLMKMGMMATINHPLDV--DTATLI----AAEFSYEIEN-- 363
Query: 61 NSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGI 120
VA D++ ++ P P L KRPPVVTIMGHVDHGKT+LLD +R +V+ E GGI
Sbjct: 364 --VAIDTD--EMLESAPDTPESLKKRPPVVTIMGHVDHGKTSLLDAIREANVIAGEAGGI 419
Query: 121 TQHIGAF 127
TQHIGA+
Sbjct: 420 TQHIGAY 426
>sp|Q6MMS6|IF2_BDEBA Translation initiation factor IF-2 OS=Bdellovibrio bacteriovorus
(strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
GN=infB PE=3 SV=1
Length = 975
Score = 85.9 bits (211), Expect = 6e-17, Method: Composition-based stats.
Identities = 54/130 (41%), Positives = 71/130 (54%), Gaps = 16/130 (12%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMY--VDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYM-VI 57
M L DLA MG+ L +M V ++N D DF I I+ + G + V
Sbjct: 395 MKLSDLAMEMGLKAPQLVRELMKQGVMANMNMD------LDFDTIALIVPEFGWEAQNVF 448
Query: 58 NPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEF 117
+ VA+ + D++ P + RPPVVT+MGHVDHGKT+LLD +RN V K E
Sbjct: 449 KTADEVAEQTAFGDLDAAP-------VTRPPVVTVMGHVDHGKTSLLDAIRNADVAKGEA 501
Query: 118 GGITQHIGAF 127
GGITQHIGA+
Sbjct: 502 GGITQHIGAY 511
>sp|B5EI57|IF2_GEOBB Translation initiation factor IF-2 OS=Geobacter bemidjiensis
(strain Bem / ATCC BAA-1014 / DSM 16622) GN=infB PE=3
SV=1
Length = 986
Score = 85.9 bits (211), Expect = 6e-17, Method: Composition-based stats.
Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 24/133 (18%)
Query: 1 MTLKDLAKSMGVDCDHLYE------VMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKY 54
+T+ +LAK MG+ L VM +++ +++D + + DF I+
Sbjct: 414 ITVGELAKRMGIKATDLIRALMKLGVMATINHPLDFDTATLLATDFGYEIE--------- 464
Query: 55 MVINPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVK 114
+VA D + ++ P P L+KRPPVVTIMGHVDHGKT+LLD +R +V+
Sbjct: 465 -------NVALDVD--EILEAEPDTPESLLKRPPVVTIMGHVDHGKTSLLDAIREANVIA 515
Query: 115 SEFGGITQHIGAF 127
E GGITQHIGA+
Sbjct: 516 GEAGGITQHIGAY 528
>sp|C6E2Q0|IF2_GEOSM Translation initiation factor IF-2 OS=Geobacter sp. (strain M21)
GN=infB PE=3 SV=1
Length = 980
Score = 85.5 bits (210), Expect = 8e-17, Method: Composition-based stats.
Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 24/133 (18%)
Query: 1 MTLKDLAKSMGVDCDHLYE------VMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKY 54
+T+ +LAK MG+ L VM +++ +++D + + DF I+
Sbjct: 408 ITVGELAKRMGIKATDLIRALMKLGVMATINHPLDFDTATLLATDFGYEIE--------- 458
Query: 55 MVINPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVK 114
+VA D + ++ P P L+KRPPVVTIMGHVDHGKT+LLD +R +V+
Sbjct: 459 -------NVALDVD--EILEAEPDAPESLLKRPPVVTIMGHVDHGKTSLLDAIREANVIA 509
Query: 115 SEFGGITQHIGAF 127
E GGITQHIGA+
Sbjct: 510 GEAGGITQHIGAY 522
>sp|B7KIU2|IF2_CYAP7 Translation initiation factor IF-2 OS=Cyanothece sp. (strain PCC
7424) GN=infB PE=3 SV=1
Length = 1101
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 9/127 (7%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPT 60
MT+++LA+ +G+ + ++ + +VN + DF I I ++ ++ + +P
Sbjct: 517 MTVRELAERLGIAETEIIRILFFKGIAVNITQ----TLDFDTIQAIAEE--LEVQIESPE 570
Query: 61 NSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGI 120
A K E D L +RPPVVTIMGHVDHGKTTLLD++R T V + E GGI
Sbjct: 571 VKAAAT---KTTEMLDANDLENLHRRPPVVTIMGHVDHGKTTLLDSIRKTKVAQGEAGGI 627
Query: 121 TQHIGAF 127
TQHIGA+
Sbjct: 628 TQHIGAY 634
>sp|Q74CT3|IF2_GEOSL Translation initiation factor IF-2 OS=Geobacter sulfurreducens
(strain ATCC 51573 / DSM 12127 / PCA) GN=infB PE=3 SV=1
Length = 883
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/127 (43%), Positives = 72/127 (56%), Gaps = 12/127 (9%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPT 60
+T+ +LAK MGV L V+M + V + P V D ++ S Y + N
Sbjct: 311 ITVGELAKRMGVKATDLIRVLMKMGMMVTINHPLDV--DTATLV----ASEFGYEIEN-- 362
Query: 61 NSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGI 120
VA D + ++ P P L KRPPVVTIMGHVDHGKT+LLD +R +V+ E GGI
Sbjct: 363 --VAIDVD--EMLESVPDAPESLTKRPPVVTIMGHVDHGKTSLLDAIREANVIAGEAGGI 418
Query: 121 TQHIGAF 127
TQHIGA+
Sbjct: 419 TQHIGAY 425
>sp|P25038|IF2M_YEAST Translation initiation factor IF-2, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IFM1 PE=1
SV=2
Length = 676
Score = 84.7 bits (208), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/55 (69%), Positives = 44/55 (80%)
Query: 73 ERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
E + P +P +L KR PVVTIMGHVDHGKTT++D LR +SVV E GGITQHIGAF
Sbjct: 131 ELKSPVNPKLLTKRAPVVTIMGHVDHGKTTIIDYLRKSSVVAQEHGGITQHIGAF 185
>sp|A1AMM1|IF2_PELPD Translation initiation factor IF-2 OS=Pelobacter propionicus
(strain DSM 2379) GN=infB PE=3 SV=1
Length = 921
Score = 84.0 bits (206), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 12/127 (9%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPT 60
+++ +LAK MG+ + L + +M + V + DF+ + + + G Y V N
Sbjct: 349 ISVGELAKRMGIKANDLIKSLMKMGMMVTINHA----LDFETTVILASEYG--YEVEN-- 400
Query: 61 NSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGI 120
+A D + ++ P P L+KRPPVVTIMGHVDHGKT+LLD +R +V+ E GGI
Sbjct: 401 --MAVDLD--EILESTPDAPETLVKRPPVVTIMGHVDHGKTSLLDAIREANVIAGEAGGI 456
Query: 121 TQHIGAF 127
TQHIGA+
Sbjct: 457 TQHIGAY 463
>sp|B3EAE7|IF2_GEOLS Translation initiation factor IF-2 OS=Geobacter lovleyi (strain
ATCC BAA-1151 / DSM 17278 / SZ) GN=infB PE=3 SV=1
Length = 949
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 53/127 (41%), Positives = 75/127 (59%), Gaps = 12/127 (9%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPT 60
+T+ +LAK MG+ L + MM + + V + + +D V++ S Y V N
Sbjct: 377 ITIGELAKRMGIKATDLIKAMMKMGSMVTINH--VLDHDAAVLL----ASDYGYEVEN-- 428
Query: 61 NSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGI 120
VA D + ++ P P +L +RPPVVTIMGHVDHGKT+LLD +R +V+ E GGI
Sbjct: 429 --VAVDLD--EILEFTPDAPELLQERPPVVTIMGHVDHGKTSLLDAIREANVIAGEAGGI 484
Query: 121 TQHIGAF 127
TQHIGA+
Sbjct: 485 TQHIGAY 491
>sp|Q97I51|IF2_CLOAB Translation initiation factor IF-2 OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=infB PE=3 SV=1
Length = 693
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 28/139 (20%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMY------VDNSVNYDRPSSVIYDFQVIIDIIQKSGMKY 54
+T+KDLA + + + +M+ ++ ++++ S V F+V D+IQK
Sbjct: 113 ITVKDLADKLKKPITEVIKELMFMGVMAAINQEIDFETSSKVAAKFKV--DVIQK----- 165
Query: 55 MVINPTNSVADDSNGKDVERRPPADP------SVLMKRPPVVTIMGHVDHGKTTLLDTLR 108
A++++ K+++ + +KRPPVVT+MGHVDHGKT+LLD +R
Sbjct: 166 ---------AEEADKKELKSEFENEFEEDEDEGTWIKRPPVVTVMGHVDHGKTSLLDAIR 216
Query: 109 NTSVVKSEFGGITQHIGAF 127
+SV ++E GGITQHIGA+
Sbjct: 217 KSSVTETEAGGITQHIGAY 235
>sp|B0K1D6|IF2_THEPX Translation initiation factor IF-2 OS=Thermoanaerobacter sp.
(strain X514) GN=infB PE=3 SV=1
Length = 692
Score = 83.2 bits (204), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 22/134 (16%)
Query: 1 MTLKDLAKSMGVDCDHLYE------VMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKY 54
+T+K+LA+ M V+ + + +M+ V+ ++++ + + ++ ++D +
Sbjct: 120 LTVKELAEKMKVNPTEIIKKLIAKGIMVTVNQQIDFENAAKIAEEYGFLVDKEEVKDELE 179
Query: 55 MVINPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVK 114
M++ T P D L RPP+VT+MGHVDHGKT+LLD +RNT+V
Sbjct: 180 MLLEET----------------PDDEKDLQPRPPIVTVMGHVDHGKTSLLDAIRNTNVTM 223
Query: 115 SEFGGITQHIGAFV 128
E GGITQHIGA V
Sbjct: 224 KEMGGITQHIGASV 237
>sp|Q8RA37|IF2_THETN Translation initiation factor IF-2 OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=infB PE=3 SV=1
Length = 707
Score = 83.2 bits (204), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/134 (33%), Positives = 78/134 (58%), Gaps = 22/134 (16%)
Query: 1 MTLKDLAKSMGVDCDHLYE------VMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKY 54
+T+K+LA+ M V+ + + +M+ V+ ++++ S + ++ ++D K
Sbjct: 135 LTVKELAEKMKVNPTEIIKKLIAQGIMVTVNQQIDFETASKIAEEYGFLVD-------KE 187
Query: 55 MVINPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVK 114
V + ++ +D+ ++ + +P RPP+VT+MGHVDHGKT+LLD +R T+V
Sbjct: 188 EVKDELEAIFEDTPDREEDLKP---------RPPIVTVMGHVDHGKTSLLDAIRKTNVTM 238
Query: 115 SEFGGITQHIGAFV 128
E GGITQHIGA V
Sbjct: 239 KEMGGITQHIGASV 252
>sp|Q823F2|IF2_CHLCV Translation initiation factor IF-2 OS=Chlamydophila caviae (strain
GPIC) GN=infB PE=3 SV=1
Length = 887
Score = 82.4 bits (202), Expect = 7e-16, Method: Composition-based stats.
Identities = 54/135 (40%), Positives = 73/135 (54%), Gaps = 19/135 (14%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMM-----YVDNSVNYDRPSSVIY---DFQVIIDIIQKSGM 52
+T+KDLA M + L + M YV N V D ++V + +F IDI
Sbjct: 312 ITIKDLAAEMKLKASELIQKMFIHGMTYVVNDV-LDNETTVQFIGLEFGCTIDIDSSEQD 370
Query: 53 KYMVINPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSV 112
K + +N+V ++ DPS L+ RPP+V MGHVDHGKTTL+D+LR T+V
Sbjct: 371 KLCI--ESNTVKEEIQ--------ETDPSKLITRPPIVAFMGHVDHGKTTLIDSLRKTNV 420
Query: 113 VKSEFGGITQHIGAF 127
E G ITQH+GAF
Sbjct: 421 AAVEAGAITQHMGAF 435
>sp|A5WBS5|IF2_PSYWF Translation initiation factor IF-2 OS=Psychrobacter sp. (strain
PRwf-1) GN=infB PE=3 SV=1
Length = 905
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 51/127 (40%), Positives = 71/127 (55%), Gaps = 10/127 (7%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPT 60
+ + DLA+ M V + +++M + V+ D+ D I+++ G + ++ T
Sbjct: 332 IVVSDLAQRMAVKAREVTKLLMKMGEIVSADQE----IDQATASLIVEEMGHNPIPVSDT 387
Query: 61 NSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGI 120
V DD ERR S + RPPVVTIMGHVDHGKT+LLD +R T V E GGI
Sbjct: 388 K-VEDDLQEAVEERR-----SNVQTRPPVVTIMGHVDHGKTSLLDKIRETKVATGEAGGI 441
Query: 121 TQHIGAF 127
TQHIGA+
Sbjct: 442 TQHIGAY 448
>sp|C5D9C9|IF2_GEOSW Translation initiation factor IF-2 OS=Geobacillus sp. (strain
WCH70) GN=infB PE=3 SV=1
Length = 732
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 22/133 (16%)
Query: 1 MTLKDLAKSMGVDCDHLYE------VMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKY 54
+T+ +LAK +G + + + VM ++ ++ D + D+ V ++
Sbjct: 159 LTVAELAKKLGREPSEIIKKLFMLGVMATINQELDKDAIELICSDYGVEVE--------- 209
Query: 55 MVINPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVK 114
V D++N + +E DP L++RPPVVTIMGHVDHGKTTLLD++R++ V +
Sbjct: 210 -----EKVVIDETNFESIE--IVDDPEDLVERPPVVTIMGHVDHGKTTLLDSIRHSKVTE 262
Query: 115 SEFGGITQHIGAF 127
E GGITQHIGA+
Sbjct: 263 QEAGGITQHIGAY 275
>sp|Q8E1H3|IF2_STRA5 Translation initiation factor IF-2 OS=Streptococcus agalactiae
serotype V (strain ATCC BAA-611 / 2603 V/R) GN=infB PE=3
SV=1
Length = 927
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 79 DPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
+P L +RPPVVTIMGHVDHGKTTLLDTLRN+ V E GGITQHIGA+
Sbjct: 422 NPDNLTERPPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAY 470
>sp|P0A3K7|IF2_STRAG Translation initiation factor IF-2 OS=Streptococcus agalactiae
GN=infB PE=3 SV=1
Length = 927
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 79 DPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
+P L +RPPVVTIMGHVDHGKTTLLDTLRN+ V E GGITQHIGA+
Sbjct: 422 NPDNLTERPPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAY 470
>sp|P0A3K6|IF2_STRA3 Translation initiation factor IF-2 OS=Streptococcus agalactiae
serotype III (strain NEM316) GN=infB PE=3 SV=1
Length = 927
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 79 DPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
+P L +RPPVVTIMGHVDHGKTTLLDTLRN+ V E GGITQHIGA+
Sbjct: 422 NPDNLTERPPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAY 470
>sp|Q3K302|IF2_STRA1 Translation initiation factor IF-2 OS=Streptococcus agalactiae
serotype Ia (strain ATCC 27591 / A909 / CDC SS700)
GN=infB PE=3 SV=1
Length = 927
Score = 82.4 bits (202), Expect = 8e-16, Method: Composition-based stats.
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 79 DPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
+P L +RPPVVTIMGHVDHGKTTLLDTLRN+ V E GGITQHIGA+
Sbjct: 422 NPDNLTERPPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAY 470
>sp|C0QHM2|IF2_DESAH Translation initiation factor IF-2 OS=Desulfobacterium
autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)
GN=infB PE=3 SV=1
Length = 1024
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 22/133 (16%)
Query: 1 MTLKDLAKSMGVDCDHL------YEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKY 54
+ L +LAK MG+ + + VM V+ ++++D V +F + +K+ ++
Sbjct: 444 IELSELAKRMGIKANEMIVKLMGMGVMATVNQTIDFDTACLVAAEFDYEV---EKASVEE 500
Query: 55 MVINPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVK 114
++ DP L+ RPPVVTIMGHVDHGKT+LLD +R + V
Sbjct: 501 DIVLQVQEAE-------------IDPDKLVSRPPVVTIMGHVDHGKTSLLDVIRKSKVAT 547
Query: 115 SEFGGITQHIGAF 127
E GGITQHIGA+
Sbjct: 548 GEAGGITQHIGAY 560
>sp|Q39H30|IF2_BURS3 Translation initiation factor IF-2 OS=Burkholderia sp. (strain 383)
GN=infB PE=3 SV=1
Length = 972
Score = 82.0 bits (201), Expect = 9e-16, Method: Composition-based stats.
Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 16/130 (12%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVI--- 57
+++ DLA M V + +VMM + V ++ + D + + I+++ G + +
Sbjct: 398 VSVADLAHKMSVKASEVIKVMMKMGQMVTINQ----VLDQETAMIIVEELGHRAVAAKLD 453
Query: 58 NPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEF 117
+P + + G D E+ P RPPVVT+MGHVDHGKT+LLD +R V E
Sbjct: 454 DPEALLVEGETGTDAEQLP---------RPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEA 504
Query: 118 GGITQHIGAF 127
GGITQHIGA+
Sbjct: 505 GGITQHIGAY 514
>sp|B8DG02|IF2_LISMH Translation initiation factor IF-2 OS=Listeria monocytogenes
serotype 4a (strain HCC23) GN=infB PE=3 SV=1
Length = 781
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 43/55 (78%)
Query: 73 ERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
E D S L++RPPVVTIMGHVDHGKTTLLD+LRNT V E GGITQHIGA+
Sbjct: 270 ELNEAVDESKLVERPPVVTIMGHVDHGKTTLLDSLRNTKVTLGEAGGITQHIGAY 324
>sp|Q71ZZ7|IF2_LISMF Translation initiation factor IF-2 OS=Listeria monocytogenes
serotype 4b (strain F2365) GN=infB PE=3 SV=1
Length = 782
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 43/55 (78%)
Query: 73 ERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
E D S L++RPPVVTIMGHVDHGKTTLLD+LRNT V E GGITQHIGA+
Sbjct: 271 ELNEAVDESKLVERPPVVTIMGHVDHGKTTLLDSLRNTKVTLGEAGGITQHIGAY 325
>sp|C1L2N1|IF2_LISMC Translation initiation factor IF-2 OS=Listeria monocytogenes
serotype 4b (strain CLIP80459) GN=infB PE=3 SV=1
Length = 782
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 43/55 (78%)
Query: 73 ERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
E D S L++RPPVVTIMGHVDHGKTTLLD+LRNT V E GGITQHIGA+
Sbjct: 271 ELNEAVDESKLVERPPVVTIMGHVDHGKTTLLDSLRNTKVTLGEAGGITQHIGAY 325
>sp|Q8Y7F6|IF2_LISMO Translation initiation factor IF-2 OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=infB PE=3
SV=1
Length = 779
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 43/55 (78%)
Query: 73 ERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
E D S L++RPPVVTIMGHVDHGKTTLLD+LRNT V E GGITQHIGA+
Sbjct: 268 ELNEAVDESKLVERPPVVTIMGHVDHGKTTLLDSLRNTKVTLGEAGGITQHIGAY 322
>sp|A0AIC6|IF2_LISW6 Translation initiation factor IF-2 OS=Listeria welshimeri serovar
6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=infB
PE=3 SV=1
Length = 780
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/49 (77%), Positives = 42/49 (85%)
Query: 79 DPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
D S L++RPPVVTIMGHVDHGKTTLLD+LRNT V E GGITQHIGA+
Sbjct: 275 DESKLVERPPVVTIMGHVDHGKTTLLDSLRNTKVTLGEAGGITQHIGAY 323
>sp|B0K9Q0|IF2_THEP3 Translation initiation factor IF-2 OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=infB PE=3
SV=1
Length = 691
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 22/134 (16%)
Query: 1 MTLKDLAKSMGVDCDHLYE------VMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKY 54
+T+K+LA+ M V+ + + +M+ V+ ++++ S + ++ ++D K +K
Sbjct: 119 LTVKELAEKMKVNPTEIIKKLIAKGIMVTVNQQIDFENASKIAEEYGFLVD---KEEVKD 175
Query: 55 MVINPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVK 114
+ DD KD L RPP+VT+MGHVDHGKT+LLD +RNT+V
Sbjct: 176 ELELLLEEAPDDE--KD-----------LQPRPPIVTVMGHVDHGKTSLLDAIRNTNVTM 222
Query: 115 SEFGGITQHIGAFV 128
E GGITQHIGA V
Sbjct: 223 KEMGGITQHIGASV 236
>sp|A0K6X5|IF2_BURCH Translation initiation factor IF-2 OS=Burkholderia cenocepacia
(strain HI2424) GN=infB PE=3 SV=1
Length = 971
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 16/130 (12%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVI--- 57
+++ DLA M + + +VMM + V ++ + D + + I+++ G + +
Sbjct: 397 VSVADLAHKMSIKASEVIKVMMKMGQMVTINQ----VLDQETAMIIVEELGHRAVAAKLD 452
Query: 58 NPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEF 117
+P + + +G D E+ P RPPVVT+MGHVDHGKT+LLD +R V E
Sbjct: 453 DPEALLVEGESGTDAEQLP---------RPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEA 503
Query: 118 GGITQHIGAF 127
GGITQHIGA+
Sbjct: 504 GGITQHIGAY 513
>sp|B1K0M0|IF2_BURCC Translation initiation factor IF-2 OS=Burkholderia cenocepacia
(strain MC0-3) GN=infB PE=3 SV=1
Length = 971
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 16/130 (12%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVI--- 57
+++ DLA M + + +VMM + V ++ + D + + I+++ G + +
Sbjct: 397 VSVADLAHKMSIKASEVIKVMMKMGQMVTINQ----VLDQETAMIIVEELGHRAVAAKLD 452
Query: 58 NPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEF 117
+P + + +G D E+ P RPPVVT+MGHVDHGKT+LLD +R V E
Sbjct: 453 DPEALLVEGESGTDAEQLP---------RPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEA 503
Query: 118 GGITQHIGAF 127
GGITQHIGA+
Sbjct: 504 GGITQHIGAY 513
>sp|Q1BWS7|IF2_BURCA Translation initiation factor IF-2 OS=Burkholderia cenocepacia
(strain AU 1054) GN=infB PE=3 SV=1
Length = 971
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 16/130 (12%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVI--- 57
+++ DLA M + + +VMM + V ++ + D + + I+++ G + +
Sbjct: 397 VSVADLAHKMSIKASEVIKVMMKMGQMVTINQ----VLDQETAMIIVEELGHRAVAAKLD 452
Query: 58 NPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEF 117
+P + + +G D E+ P RPPVVT+MGHVDHGKT+LLD +R V E
Sbjct: 453 DPEALLVEGESGTDAEQLP---------RPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEA 503
Query: 118 GGITQHIGAF 127
GGITQHIGA+
Sbjct: 504 GGITQHIGAY 513
>sp|Q92C29|IF2_LISIN Translation initiation factor IF-2 OS=Listeria innocua serovar 6a
(strain CLIP 11262) GN=infB PE=3 SV=1
Length = 782
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 43/55 (78%)
Query: 73 ERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
E D S L++RPPVVTIMGHVDHGKTTLLD+LRNT V E GGITQHIGA+
Sbjct: 271 ELNEAVDESKLVERPPVVTIMGHVDHGKTTLLDSLRNTKVTLGEAGGITQHIGAY 325
>sp|A9ABD5|IF2_BURM1 Translation initiation factor IF-2 OS=Burkholderia multivorans
(strain ATCC 17616 / 249) GN=infB PE=3 SV=1
Length = 969
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 16/130 (12%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVI--- 57
+++ DLA M + + +VMM + V ++ + D + + ++++ G + +
Sbjct: 395 ISVADLAHKMAIKASEVIKVMMKMGQMVTINQ----VLDQETAMIVVEELGHRALAAKLD 450
Query: 58 NPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEF 117
+P + + G D E+ P RPPVVT+MGHVDHGKT+LLD +R V E
Sbjct: 451 DPEALLVEGETGSDAEQLP---------RPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEA 501
Query: 118 GGITQHIGAF 127
GGITQHIGA+
Sbjct: 502 GGITQHIGAY 511
>sp|B4E7L1|IF2_BURCJ Translation initiation factor IF-2 OS=Burkholderia cepacia (strain
J2315 / LMG 16656) GN=infB PE=3 SV=1
Length = 971
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 16/130 (12%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVI--- 57
+++ DLA M + + +VMM + V ++ + D + + I+++ G + +
Sbjct: 397 VSVADLAHKMSIKASEVIKVMMKMGQMVTINQ----VLDQETAMIIVEELGHRAVAAKLD 452
Query: 58 NPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEF 117
+P + + G D E+ P RPPVVT+MGHVDHGKT+LLD +R V E
Sbjct: 453 DPEALLVEGETGTDAEQLP---------RPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEA 503
Query: 118 GGITQHIGAF 127
GGITQHIGA+
Sbjct: 504 GGITQHIGAY 513
>sp|C1F697|IF2_ACIC5 Translation initiation factor IF-2 OS=Acidobacterium capsulatum
(strain ATCC 51196 / DSM 11244 / JCM 7670) GN=infB PE=3
SV=1
Length = 1061
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 6/127 (4%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPT 60
+++KDLA+ +GV L ++ V ++ D +++ D+ ++ G VI+
Sbjct: 474 ISVKDLAEKLGVRGKDLIATLLMRGVFVTVNQS----LDGELVKDVARQFGADTTVISFE 529
Query: 61 NSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGI 120
+ +A+++ + + P + + + RPPVVT+MGHVDHGKT+LLD +R T V E GGI
Sbjct: 530 DQMANEAFENLLSQENPDE--LELSRPPVVTVMGHVDHGKTSLLDAIRETDVAGGEAGGI 587
Query: 121 TQHIGAF 127
TQHIGA+
Sbjct: 588 TQHIGAY 594
>sp|Q15V72|IF2_PSEA6 Translation initiation factor IF-2 OS=Pseudoalteromonas atlantica
(strain T6c / ATCC BAA-1087) GN=infB PE=3 SV=1
Length = 869
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPT 60
+T+ DLA + + + + MM + ++ + D + + ++++ G KY ++N
Sbjct: 297 ITVSDLASKLAIKATEVIKAMMKMGEMATINQ----VLDQETAVLVVEEMGHKYELVN-D 351
Query: 61 NSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGI 120
N++ D+ + S L R PVVTIMGHVDHGKT+LLD +R V E GGI
Sbjct: 352 NALEDELLADKIS-------SELASRAPVVTIMGHVDHGKTSLLDYIRRAKVAAGEAGGI 404
Query: 121 TQHIGAF 127
TQHIGA+
Sbjct: 405 TQHIGAY 411
>sp|A5EWY9|IF2_DICNV Translation initiation factor IF-2 OS=Dichelobacter nodosus (strain
VCS1703A) GN=infB PE=3 SV=1
Length = 879
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/127 (37%), Positives = 73/127 (57%), Gaps = 10/127 (7%)
Query: 1 MTLKDLAKSMGVDCDHLYEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKYMVINPT 60
+T+ DLA+ M V L + MM + + V ++ + D + I + G +Y+++
Sbjct: 306 ITVGDLAQKMSVKASELIKTMMKLGSMVTINQ----LLDQETAALIADEMGHRYVLLK-E 360
Query: 61 NSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGI 120
N + + + E + ++ R PVVTIMGHVDHGKT+LLD +R+T VV E GGI
Sbjct: 361 NELEEQVMAQASENKMD-----VVVRAPVVTIMGHVDHGKTSLLDYIRHTRVVSGEAGGI 415
Query: 121 TQHIGAF 127
TQHIGA+
Sbjct: 416 TQHIGAY 422
>sp|Q3AB98|IF2_CARHZ Translation initiation factor IF-2 OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=infB PE=3
SV=1
Length = 827
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 22/133 (16%)
Query: 1 MTLKDLAKSMGVDCDHL------YEVMMYVDNSVNYDRPSSVIYDFQVIIDIIQKSGMKY 54
MT+++ AK MG + Y ++ ++ ++ D + + DF + + ++
Sbjct: 252 MTVQEFAKIMGKSAAEVIKKLMSYGILATINQEIDADTATIIATDFGYEVTVEKEEKEDI 311
Query: 55 MVINPTNSVADDSNGKDVERRPPADPSVLMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVK 114
++ T P DP L RPP+VT+MGHVDHGKT+LLD +R T+V
Sbjct: 312 WLLEET----------------PDDPESLEPRPPIVTVMGHVDHGKTSLLDAIRQTNVTA 355
Query: 115 SEFGGITQHIGAF 127
+E GGITQHIGA+
Sbjct: 356 TEAGGITQHIGAY 368
>sp|B5E266|IF2_STRP4 Translation initiation factor IF-2 OS=Streptococcus pneumoniae
serotype 19F (strain G54) GN=infB PE=3 SV=1
Length = 930
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/45 (80%), Positives = 40/45 (88%)
Query: 83 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
L++RPPVVTIMGHVDHGKTTLLDTLRN+ V E GGITQHIGA+
Sbjct: 430 LVERPPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAY 474
>sp|C1CQ48|IF2_STRZT Translation initiation factor IF-2 OS=Streptococcus pneumoniae
(strain Taiwan19F-14) GN=infB PE=3 SV=1
Length = 930
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/45 (80%), Positives = 40/45 (88%)
Query: 83 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
L++RPPVVTIMGHVDHGKTTLLDTLRN+ V E GGITQHIGA+
Sbjct: 430 LVERPPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAY 474
>sp|C1CJ39|IF2_STRZP Translation initiation factor IF-2 OS=Streptococcus pneumoniae
(strain P1031) GN=infB PE=3 SV=1
Length = 930
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/45 (80%), Positives = 40/45 (88%)
Query: 83 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
L++RPPVVTIMGHVDHGKTTLLDTLRN+ V E GGITQHIGA+
Sbjct: 430 LVERPPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAY 474
>sp|Q97S57|IF2_STRPN Translation initiation factor IF-2 OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=infB PE=3
SV=1
Length = 958
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/45 (80%), Positives = 40/45 (88%)
Query: 83 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
L++RPPVVTIMGHVDHGKTTLLDTLRN+ V E GGITQHIGA+
Sbjct: 458 LVERPPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAY 502
>sp|B8ZM93|IF2_STRPJ Translation initiation factor IF-2 OS=Streptococcus pneumoniae
(strain ATCC 700669 / Spain 23F-1) GN=infB PE=3 SV=1
Length = 930
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/45 (80%), Positives = 40/45 (88%)
Query: 83 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
L++RPPVVTIMGHVDHGKTTLLDTLRN+ V E GGITQHIGA+
Sbjct: 430 LVERPPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAY 474
>sp|C1C5S8|IF2_STRP7 Translation initiation factor IF-2 OS=Streptococcus pneumoniae
(strain 70585) GN=infB PE=3 SV=1
Length = 930
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/45 (80%), Positives = 40/45 (88%)
Query: 83 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
L++RPPVVTIMGHVDHGKTTLLDTLRN+ V E GGITQHIGA+
Sbjct: 430 LVERPPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAY 474
>sp|C1CCT8|IF2_STRZJ Translation initiation factor IF-2 OS=Streptococcus pneumoniae
(strain JJA) GN=infB PE=3 SV=1
Length = 930
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/45 (80%), Positives = 40/45 (88%)
Query: 83 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
L++RPPVVTIMGHVDHGKTTLLDTLRN+ V E GGITQHIGA+
Sbjct: 430 LVERPPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAY 474
>sp|Q8DQV2|IF2_STRR6 Translation initiation factor IF-2 OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=infB PE=3 SV=1
Length = 930
Score = 81.3 bits (199), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/45 (80%), Positives = 40/45 (88%)
Query: 83 LMKRPPVVTIMGHVDHGKTTLLDTLRNTSVVKSEFGGITQHIGAF 127
L++RPPVVTIMGHVDHGKTTLLDTLRN+ V E GGITQHIGA+
Sbjct: 430 LVERPPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAY 474
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,037,077
Number of Sequences: 539616
Number of extensions: 2039330
Number of successful extensions: 10855
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 411
Number of HSP's that attempted gapping in prelim test: 9797
Number of HSP's gapped (non-prelim): 1448
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)