Query psy467
Match_columns 845
No_of_seqs 799 out of 3071
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 22:47:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy467.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/467hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 4.5E-40 1.5E-44 371.5 42.2 302 8-386 101-409 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 3.2E-39 1.1E-43 349.0 45.2 288 5-387 3-301 (304)
3 3ow8_A WD repeat-containing pr 100.0 5.7E-39 2E-43 350.8 43.0 283 8-386 25-319 (321)
4 1got_B GT-beta; complex (GTP-b 100.0 3.5E-38 1.2E-42 346.2 46.2 282 6-385 46-340 (340)
5 2pbi_B Guanine nucleotide-bind 100.0 3.7E-37 1.3E-41 340.8 44.5 283 6-385 55-354 (354)
6 4ery_A WD repeat-containing pr 100.0 8.6E-37 2.9E-41 328.9 44.3 283 8-387 16-311 (312)
7 1nr0_A Actin interacting prote 100.0 2.2E-37 7.7E-42 367.5 43.7 348 9-388 141-567 (611)
8 3frx_A Guanine nucleotide-bind 100.0 2.3E-36 7.9E-41 329.1 45.7 283 7-387 9-316 (319)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.9E-36 9.9E-41 331.9 42.9 294 1-389 1-336 (345)
10 3iz6_a 40S ribosomal protein R 100.0 5E-37 1.7E-41 342.5 34.9 285 7-388 58-375 (380)
11 2xzm_R RACK1; ribosome, transl 100.0 9.1E-36 3.1E-40 327.1 42.0 285 4-387 10-339 (343)
12 3ow8_A WD repeat-containing pr 100.0 6.8E-36 2.3E-40 326.4 39.8 253 2-351 59-320 (321)
13 1nr0_A Actin interacting prote 100.0 7.3E-36 2.5E-40 354.5 42.2 346 2-386 171-609 (611)
14 1erj_A Transcriptional repress 100.0 2.8E-35 9.5E-40 329.9 44.4 285 11-387 60-388 (393)
15 2ymu_A WD-40 repeat protein; u 100.0 2.7E-35 9.3E-40 343.2 45.8 319 3-385 245-577 (577)
16 4gqb_B Methylosome protein 50; 100.0 3.5E-36 1.2E-40 332.9 35.5 290 4-390 17-333 (344)
17 2hes_X YDR267CP; beta-propelle 100.0 7.4E-35 2.5E-39 318.7 43.1 286 6-387 5-327 (330)
18 1vyh_C Platelet-activating fac 100.0 1.1E-35 3.9E-40 335.4 36.6 252 2-350 131-409 (410)
19 4g56_B MGC81050 protein; prote 100.0 9.6E-36 3.3E-40 330.1 34.1 288 4-387 29-342 (357)
20 3zwl_B Eukaryotic translation 100.0 4.5E-34 1.5E-38 310.5 45.2 286 4-388 21-346 (369)
21 2ymu_A WD-40 repeat protein; u 100.0 4.8E-34 1.6E-38 332.7 46.7 328 3-394 204-545 (577)
22 1r5m_A SIR4-interacting protei 100.0 6.1E-34 2.1E-38 315.6 40.3 317 12-388 42-425 (425)
23 1got_B GT-beta; complex (GTP-b 100.0 6.7E-34 2.3E-38 312.1 40.0 252 2-349 78-340 (340)
24 1sq9_A Antiviral protein SKI8; 100.0 3.4E-34 1.2E-38 317.2 37.1 282 6-387 7-394 (397)
25 4aow_A Guanine nucleotide-bind 100.0 7.3E-33 2.5E-37 298.9 45.5 282 8-387 31-336 (340)
26 4gqb_B Methylosome protein 50; 100.0 5.3E-34 1.8E-38 315.4 37.0 244 13-354 80-333 (344)
27 1gxr_A ESG1, transducin-like e 100.0 3.2E-33 1.1E-37 300.4 41.9 278 8-386 44-335 (337)
28 3dm0_A Maltose-binding peripla 100.0 1.5E-33 5.2E-38 339.0 43.9 283 8-387 375-692 (694)
29 3sfz_A APAF-1, apoptotic pepti 100.0 9E-34 3.1E-38 361.2 42.8 365 2-387 638-1206(1249)
30 3odt_A Protein DOA1; ubiquitin 100.0 6.4E-33 2.2E-37 295.3 41.9 279 6-390 9-298 (313)
31 2ynn_A Coatomer subunit beta'; 100.0 2.6E-33 8.8E-38 302.6 38.9 254 2-352 36-302 (304)
32 1k8k_C P40, ARP2/3 complex 41 100.0 2.4E-33 8.2E-38 306.6 39.0 298 10-387 3-360 (372)
33 3frx_A Guanine nucleotide-bind 100.0 5.2E-33 1.8E-37 302.5 40.1 252 2-353 41-318 (319)
34 3mkq_A Coatomer beta'-subunit; 100.0 5.3E-33 1.8E-37 337.4 43.6 289 4-387 2-301 (814)
35 3vl1_A 26S proteasome regulato 100.0 1.1E-33 3.7E-38 315.9 34.1 298 17-388 58-365 (420)
36 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.6E-33 1.6E-37 306.4 38.2 277 2-359 39-342 (345)
37 3ei3_B DNA damage-binding prot 100.0 4.1E-33 1.4E-37 308.6 36.9 284 7-388 65-382 (383)
38 3k26_A Polycomb protein EED; W 100.0 8.8E-34 3E-38 308.3 30.9 308 10-387 13-365 (366)
39 1pgu_A Actin interacting prote 100.0 9E-33 3.1E-37 322.8 41.0 352 8-388 153-614 (615)
40 3sfz_A APAF-1, apoptotic pepti 100.0 9.1E-33 3.1E-37 352.0 44.1 322 9-387 609-991 (1249)
41 2pbi_B Guanine nucleotide-bind 100.0 9.4E-33 3.2E-37 305.5 38.4 253 2-349 87-354 (354)
42 3i2n_A WD repeat-containing pr 100.0 3.3E-33 1.1E-37 303.2 32.8 282 9-388 12-353 (357)
43 1erj_A Transcriptional repress 100.0 2.6E-32 8.9E-37 305.8 40.6 251 17-353 125-390 (393)
44 4ery_A WD repeat-containing pr 100.0 4.1E-32 1.4E-36 292.3 40.6 255 2-351 46-311 (312)
45 2pm9_A Protein WEB1, protein t 100.0 4.6E-34 1.6E-38 317.6 25.2 290 2-387 46-413 (416)
46 2pm7_B Protein transport prote 100.0 1.3E-32 4.4E-37 296.1 35.2 254 9-352 3-285 (297)
47 2xzm_R RACK1; ribosome, transl 100.0 2.1E-32 7.1E-37 300.3 37.2 252 2-353 50-341 (343)
48 3f3f_A Nucleoporin SEH1; struc 100.0 2E-32 6.7E-37 293.3 35.1 260 9-359 5-344 (351)
49 2hes_X YDR267CP; beta-propelle 100.0 3.8E-32 1.3E-36 297.2 35.2 262 2-352 35-328 (330)
50 3iz6_a 40S ribosomal protein R 100.0 6E-33 2.1E-37 309.5 28.6 263 2-354 89-377 (380)
51 3v7d_B Cell division control p 100.0 3.9E-31 1.3E-35 300.4 43.7 282 2-387 143-462 (464)
52 4g56_B MGC81050 protein; prote 100.0 2.3E-32 7.9E-37 302.9 32.1 247 10-354 89-345 (357)
53 3gre_A Serine/threonine-protei 100.0 3.4E-32 1.2E-36 306.6 34.0 284 8-385 55-437 (437)
54 2oaj_A Protein SNI1; WD40 repe 100.0 7.8E-32 2.7E-36 334.5 40.2 366 2-390 40-607 (902)
55 3vl1_A 26S proteasome regulato 100.0 5.5E-32 1.9E-36 302.1 34.8 288 3-388 80-419 (420)
56 3dwl_C Actin-related protein 2 100.0 1.5E-33 5.2E-38 310.5 21.8 262 10-351 6-280 (377)
57 3dw8_B Serine/threonine-protei 100.0 8.5E-32 2.9E-36 302.7 34.8 297 5-385 11-443 (447)
58 4aez_A CDC20, WD repeat-contai 100.0 5E-31 1.7E-35 295.3 40.7 279 9-388 85-380 (401)
59 3v7d_B Cell division control p 100.0 1.1E-30 3.6E-35 296.8 44.0 277 7-388 113-421 (464)
60 3bg1_A Protein SEC13 homolog; 100.0 1.1E-32 3.7E-37 299.7 26.3 253 10-352 8-293 (316)
61 1yfq_A Cell cycle arrest prote 100.0 8.4E-32 2.9E-36 291.3 32.4 271 9-380 5-310 (342)
62 4e54_B DNA damage-binding prot 100.0 2.9E-32 1E-36 309.2 30.2 285 9-387 113-429 (435)
63 3jrp_A Fusion protein of prote 100.0 2E-31 6.7E-36 291.2 35.1 259 8-356 4-291 (379)
64 2pm9_A Protein WEB1, protein t 100.0 9.1E-33 3.1E-37 307.2 24.5 284 15-389 12-338 (416)
65 3mmy_A MRNA export factor; mRN 100.0 2.2E-31 7.5E-36 289.1 34.6 283 4-380 28-333 (368)
66 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.8E-30 1.3E-34 291.5 44.2 305 14-389 118-443 (445)
67 1gxr_A ESG1, transducin-like e 100.0 4.8E-31 1.6E-35 283.4 33.8 276 14-389 8-297 (337)
68 1p22_A F-BOX/WD-repeat protein 100.0 9.6E-31 3.3E-35 296.2 37.8 270 11-390 129-416 (435)
69 1r5m_A SIR4-interacting protei 100.0 7.8E-31 2.7E-35 290.6 34.4 278 14-351 107-424 (425)
70 4aow_A Guanine nucleotide-bind 100.0 5.4E-30 1.8E-34 276.4 39.8 254 2-354 62-339 (340)
71 2oaj_A Protein SNI1; WD40 repe 100.0 2.5E-30 8.7E-35 320.9 42.4 349 2-386 80-659 (902)
72 4gga_A P55CDC, cell division c 100.0 1.4E-29 4.8E-34 285.6 44.3 274 17-387 107-394 (420)
73 1sq9_A Antiviral protein SKI8; 100.0 7E-31 2.4E-35 290.5 32.5 262 8-354 55-397 (397)
74 3dm0_A Maltose-binding peripla 100.0 1.7E-30 5.7E-35 312.5 38.0 251 2-351 406-692 (694)
75 3zwl_B Eukaryotic translation 100.0 8.3E-30 2.9E-34 276.8 39.6 254 3-355 56-349 (369)
76 4a11_B DNA excision repair pro 100.0 4.9E-30 1.7E-34 283.0 37.7 300 9-389 37-366 (408)
77 3k26_A Polycomb protein EED; W 100.0 1.2E-30 4E-35 283.6 32.2 254 14-352 68-366 (366)
78 3ei3_B DNA damage-binding prot 100.0 1.7E-30 5.8E-35 287.6 33.6 266 2-352 97-382 (383)
79 4ggc_A P55CDC, cell division c 100.0 1.7E-29 5.9E-34 269.8 40.2 277 18-353 28-316 (318)
80 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.6E-29 5.6E-34 286.4 42.2 262 57-387 118-390 (445)
81 1pgu_A Actin interacting prote 100.0 4.2E-30 1.4E-34 300.2 37.9 275 12-387 15-327 (615)
82 4aez_A CDC20, WD repeat-contai 100.0 3.8E-30 1.3E-34 288.2 35.9 257 3-359 115-387 (401)
83 4gga_A P55CDC, cell division c 100.0 1.2E-29 4E-34 286.3 38.8 265 2-366 126-409 (420)
84 2pm7_B Protein transport prote 100.0 1.1E-29 3.9E-34 273.1 36.0 255 52-387 3-284 (297)
85 3mkq_A Coatomer beta'-subunit; 100.0 1.7E-29 5.9E-34 306.6 41.5 288 3-387 37-385 (814)
86 2j04_B YDR362CP, TAU91; beta p 100.0 2.2E-31 7.7E-36 311.2 23.9 289 2-390 184-519 (524)
87 1k8k_C P40, ARP2/3 complex 41 100.0 6.9E-30 2.4E-34 279.1 33.3 249 8-354 45-363 (372)
88 3i2n_A WD repeat-containing pr 100.0 4.3E-30 1.5E-34 278.7 29.9 262 3-355 46-356 (357)
89 3gre_A Serine/threonine-protei 100.0 8E-31 2.7E-35 295.4 24.5 263 13-349 109-437 (437)
90 2aq5_A Coronin-1A; WD40 repeat 100.0 1.8E-30 6.2E-35 290.3 26.8 280 16-390 35-344 (402)
91 4h5i_A Guanine nucleotide-exch 100.0 7.1E-30 2.4E-34 284.0 29.8 272 15-387 14-342 (365)
92 3odt_A Protein DOA1; ubiquitin 100.0 1.4E-28 4.8E-33 261.7 37.2 251 3-359 41-303 (313)
93 4e54_B DNA damage-binding prot 100.0 1.3E-30 4.3E-35 295.8 22.6 276 2-356 143-434 (435)
94 2vdu_B TRNA (guanine-N(7)-)-me 100.0 9.2E-29 3.1E-33 281.5 35.8 264 16-379 5-370 (450)
95 3f3f_A Nucleoporin SEH1; struc 100.0 8.4E-29 2.9E-33 265.0 32.9 254 52-388 5-337 (351)
96 4a11_B DNA excision repair pro 100.0 1.5E-28 5.1E-33 271.2 35.4 256 13-360 97-373 (408)
97 3jrp_A Fusion protein of prote 100.0 1.2E-28 4.2E-33 269.1 34.0 258 49-387 2-286 (379)
98 2xyi_A Probable histone-bindin 100.0 5.5E-29 1.9E-33 282.1 31.7 252 8-353 121-411 (430)
99 2aq5_A Coronin-1A; WD40 repeat 100.0 3.6E-29 1.2E-33 279.7 28.6 249 10-355 76-345 (402)
100 2j04_B YDR362CP, TAU91; beta p 100.0 3.7E-30 1.3E-34 300.9 21.3 267 14-377 132-458 (524)
101 3bg1_A Protein SEC13 homolog; 100.0 2.7E-29 9.1E-34 272.9 25.8 259 53-387 8-292 (316)
102 3dwl_C Actin-related protein 2 100.0 1.1E-29 3.7E-34 279.7 22.8 243 54-390 7-283 (377)
103 4h5i_A Guanine nucleotide-exch 100.0 2E-28 6.8E-33 272.3 32.5 247 10-353 68-344 (365)
104 3jro_A Fusion protein of prote 100.0 3.4E-29 1.2E-33 304.9 25.9 255 9-353 3-286 (753)
105 3dw8_B Serine/threonine-protei 100.0 2.4E-28 8.1E-33 274.6 30.8 258 8-350 74-444 (447)
106 1p22_A F-BOX/WD-repeat protein 100.0 4.3E-28 1.5E-32 274.5 31.6 248 2-358 154-420 (435)
107 4gq1_A NUP37; propeller, trans 100.0 1.4E-28 4.9E-33 275.8 24.1 248 27-351 100-388 (393)
108 3bws_A Protein LP49; two-domai 100.0 1.1E-26 3.8E-31 260.5 36.9 279 9-388 117-432 (433)
109 1yfq_A Cell cycle arrest prote 100.0 3.4E-27 1.2E-31 255.0 30.1 242 8-344 49-314 (342)
110 3vu4_A KMHSV2; beta-propeller 100.0 1.7E-26 5.8E-31 255.3 33.8 285 8-386 12-334 (355)
111 2xyi_A Probable histone-bindin 100.0 1.1E-26 3.8E-31 263.2 32.3 283 16-390 46-412 (430)
112 3lrv_A PRE-mRNA-splicing facto 100.0 2E-27 6.7E-32 260.4 24.1 226 27-354 47-294 (343)
113 2j04_A TAU60, YPL007P, hypothe 100.0 6.7E-27 2.3E-31 271.0 27.9 269 12-383 12-351 (588)
114 1l0q_A Surface layer protein; 100.0 4E-25 1.4E-29 244.4 39.5 257 29-387 3-274 (391)
115 2vdu_B TRNA (guanine-N(7)-)-me 99.9 4.7E-26 1.6E-30 259.1 32.1 269 10-352 97-391 (450)
116 3mmy_A MRNA export factor; mRN 99.9 4.3E-26 1.5E-30 247.4 29.9 256 3-344 66-337 (368)
117 1l0q_A Surface layer protein; 99.9 7.4E-25 2.5E-29 242.3 39.7 260 3-365 14-288 (391)
118 4gq1_A NUP37; propeller, trans 99.9 9.1E-27 3.1E-31 261.1 22.8 298 16-386 16-387 (393)
119 3jro_A Fusion protein of prote 99.9 2.5E-26 8.6E-31 279.6 28.5 256 51-387 2-284 (753)
120 4ggc_A P55CDC, cell division c 99.9 1.8E-24 6.1E-29 230.9 38.3 273 60-386 27-313 (318)
121 3bws_A Protein LP49; two-domai 99.9 4.4E-24 1.5E-28 239.4 34.2 242 10-352 164-432 (433)
122 2w18_A PALB2, fancn, partner a 99.9 2E-24 7E-29 236.6 30.6 249 7-350 27-355 (356)
123 3lrv_A PRE-mRNA-splicing facto 99.9 1.5E-24 5.1E-29 237.5 26.1 248 2-351 59-332 (343)
124 2hqs_A Protein TOLB; TOLB, PAL 99.9 9.5E-24 3.2E-28 238.9 29.1 268 2-372 94-406 (415)
125 2j04_A TAU60, YPL007P, hypothe 99.9 3.7E-24 1.3E-28 248.2 24.0 244 13-342 83-350 (588)
126 3vu4_A KMHSV2; beta-propeller 99.9 2.3E-23 7.7E-28 230.3 27.8 240 42-389 3-272 (355)
127 2ecf_A Dipeptidyl peptidase IV 99.9 3.5E-22 1.2E-26 240.7 34.4 326 15-380 36-442 (741)
128 1nir_A Nitrite reductase; hemo 99.9 1.2E-21 4.1E-26 229.9 36.2 305 22-380 144-496 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.7E-22 6E-27 228.5 27.0 264 15-380 62-371 (415)
130 3vgz_A Uncharacterized protein 99.9 8E-21 2.7E-25 205.9 37.7 270 14-380 39-331 (353)
131 2w18_A PALB2, fancn, partner a 99.9 8E-22 2.7E-26 216.1 26.9 195 17-309 113-355 (356)
132 3u4y_A Uncharacterized protein 99.9 8.7E-21 3E-25 204.6 33.4 283 21-397 3-313 (331)
133 1k32_A Tricorn protease; prote 99.9 7.3E-21 2.5E-25 239.4 34.6 338 8-380 45-489 (1045)
134 1pby_B Quinohemoprotein amine 99.9 2.3E-20 7.9E-25 200.3 32.6 298 29-363 2-321 (337)
135 1xfd_A DIP, dipeptidyl aminope 99.9 8.7E-22 3E-26 236.3 23.5 328 16-380 17-427 (723)
136 2ojh_A Uncharacterized protein 99.9 2.9E-21 1E-25 202.0 24.6 246 34-380 18-289 (297)
137 1nir_A Nitrite reductase; hemo 99.9 1.8E-20 6.1E-25 219.9 32.9 305 8-363 172-525 (543)
138 1ri6_A Putative isomerase YBHE 99.9 1.2E-19 3.9E-24 195.3 34.2 268 12-372 34-331 (343)
139 2ojh_A Uncharacterized protein 99.9 1.1E-20 3.6E-25 197.8 23.6 237 8-344 34-293 (297)
140 1ri6_A Putative isomerase YBHE 99.9 1.8E-19 6.2E-24 193.8 32.9 264 30-388 7-308 (343)
141 1k32_A Tricorn protease; prote 99.9 1.3E-19 4.3E-24 228.2 34.5 342 3-380 3-438 (1045)
142 2z3z_A Dipeptidyl aminopeptida 99.9 1.7E-19 6E-24 216.1 31.5 275 16-389 82-436 (706)
143 1jmx_B Amine dehydrogenase; ox 99.9 2E-19 7E-24 194.2 28.9 301 20-362 4-335 (349)
144 3u4y_A Uncharacterized protein 99.8 1.2E-18 4.1E-23 187.9 32.0 249 9-354 34-306 (331)
145 2ecf_A Dipeptidyl peptidase IV 99.8 2.6E-19 8.9E-24 215.6 29.4 303 58-387 36-412 (741)
146 3o4h_A Acylamino-acid-releasin 99.8 2.3E-19 8E-24 210.6 27.3 263 15-388 21-313 (582)
147 3vgz_A Uncharacterized protein 99.8 1.3E-17 4.4E-22 180.6 35.2 231 15-344 88-335 (353)
148 3hfq_A Uncharacterized protein 99.8 3.6E-18 1.2E-22 186.1 30.1 274 37-356 15-323 (347)
149 1xfd_A DIP, dipeptidyl aminope 99.8 9E-19 3.1E-23 210.1 27.4 289 3-342 39-429 (723)
150 2z3z_A Dipeptidyl aminopeptida 99.8 8.3E-19 2.8E-23 210.2 26.1 298 17-387 27-388 (706)
151 3scy_A Hypothetical bacterial 99.8 3.2E-17 1.1E-21 179.8 36.1 264 14-372 48-360 (361)
152 1z68_A Fibroblast activation p 99.8 4.9E-18 1.7E-22 204.1 26.3 322 19-380 19-427 (719)
153 3pe7_A Oligogalacturonate lyas 99.8 1.1E-17 3.8E-22 184.4 26.1 283 8-388 23-382 (388)
154 2oit_A Nucleoporin 214KDA; NH2 99.8 4.8E-18 1.6E-22 193.6 22.6 153 14-168 35-218 (434)
155 3scy_A Hypothetical bacterial 99.8 4E-16 1.4E-20 171.0 35.1 275 28-389 13-338 (361)
156 4a5s_A Dipeptidyl peptidase 4 99.8 3.5E-17 1.2E-21 198.4 25.1 309 15-379 16-379 (740)
157 2oiz_A Aromatic amine dehydrog 99.7 1.2E-15 4.1E-20 169.3 33.5 298 27-375 14-360 (361)
158 1z68_A Fibroblast activation p 99.7 5.3E-17 1.8E-21 195.1 22.4 287 17-360 61-451 (719)
159 1pby_B Quinohemoprotein amine 99.7 1.6E-15 5.5E-20 162.4 30.6 256 71-387 2-309 (337)
160 3hfq_A Uncharacterized protein 99.7 4.6E-16 1.6E-20 169.4 26.6 252 11-315 35-323 (347)
161 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.1E-15 3.7E-20 169.0 29.7 258 14-353 38-342 (365)
162 3azo_A Aminopeptidase; POP fam 99.7 2.5E-16 8.6E-21 187.2 26.1 290 9-387 17-366 (662)
163 2oit_A Nucleoporin 214KDA; NH2 99.7 8.5E-17 2.9E-21 183.3 19.4 210 38-353 23-279 (434)
164 1jof_A Carboxy-CIS,CIS-muconat 99.7 2.6E-15 8.9E-20 165.9 30.2 270 30-392 4-345 (365)
165 3c5m_A Oligogalacturonate lyas 99.7 2.2E-16 7.6E-21 173.7 20.6 285 8-387 23-381 (396)
166 1jmx_B Amine dehydrogenase; ox 99.7 1.6E-15 5.5E-20 163.5 26.4 271 63-387 4-324 (349)
167 3o4h_A Acylamino-acid-releasin 99.7 7.4E-16 2.5E-20 180.8 25.4 254 3-359 46-320 (582)
168 2gop_A Trilobed protease; beta 99.7 1.3E-14 4.5E-19 157.4 30.2 263 4-387 4-330 (347)
169 3fvz_A Peptidyl-glycine alpha- 99.7 1.5E-14 5.1E-19 157.7 30.0 249 14-352 22-322 (329)
170 1q7f_A NHL, brain tumor CG1071 99.7 5.3E-14 1.8E-18 148.9 32.5 240 13-353 27-281 (286)
171 3azo_A Aminopeptidase; POP fam 99.7 4.4E-15 1.5E-19 176.5 25.5 265 8-362 60-379 (662)
172 2dg1_A DRP35, lactonase; beta 99.6 3.4E-14 1.2E-18 153.6 27.7 263 15-380 5-297 (333)
173 4a5s_A Dipeptidyl peptidase 4 99.6 4.3E-15 1.5E-19 180.1 22.2 254 59-378 17-334 (740)
174 3pe7_A Oligogalacturonate lyas 99.6 2.9E-14 1E-18 156.9 25.7 162 12-189 77-276 (388)
175 3e5z_A Putative gluconolactona 99.6 1.6E-13 5.6E-18 146.2 29.6 245 8-354 20-288 (296)
176 2xdw_A Prolyl endopeptidase; a 99.6 3.3E-13 1.1E-17 162.6 34.4 246 14-354 123-416 (710)
177 3fvz_A Peptidyl-glycine alpha- 99.6 4.4E-13 1.5E-17 146.1 29.4 243 58-388 23-322 (329)
178 2dg1_A DRP35, lactonase; beta 99.6 3.5E-12 1.2E-16 137.7 36.0 243 9-343 38-300 (333)
179 2z2n_A Virginiamycin B lyase; 99.6 2.5E-11 8.6E-16 127.7 40.8 269 10-380 9-283 (299)
180 3no2_A Uncharacterized protein 99.6 8.2E-13 2.8E-17 141.2 29.4 242 27-370 4-272 (276)
181 2xdw_A Prolyl endopeptidase; a 99.6 5.9E-13 2E-17 160.4 31.5 258 25-380 81-397 (710)
182 1q7f_A NHL, brain tumor CG1071 99.6 3.9E-12 1.4E-16 134.4 33.0 232 56-386 27-278 (286)
183 2gop_A Trilobed protease; beta 99.5 7.7E-13 2.6E-17 143.4 26.2 243 16-365 59-342 (347)
184 3c5m_A Oligogalacturonate lyas 99.5 1.1E-13 3.7E-18 152.1 19.6 165 9-189 73-276 (396)
185 1rwi_B Serine/threonine-protei 99.5 6.8E-13 2.3E-17 138.5 23.8 239 17-354 25-266 (270)
186 3e5z_A Putative gluconolactona 99.5 3.5E-12 1.2E-16 135.8 29.2 251 48-388 17-284 (296)
187 2oiz_A Aromatic amine dehydrog 99.5 2.8E-12 9.5E-17 142.2 27.1 270 9-335 45-360 (361)
188 2bkl_A Prolyl endopeptidase; m 99.5 1.5E-12 5E-17 156.6 26.7 269 25-395 77-404 (695)
189 1qks_A Cytochrome CD1 nitrite 99.5 1.1E-11 3.7E-16 145.9 33.2 303 27-385 166-523 (567)
190 2bkl_A Prolyl endopeptidase; m 99.5 1.4E-12 4.9E-17 156.7 25.2 244 13-355 118-400 (695)
191 3dsm_A Uncharacterized protein 99.5 2.6E-11 8.7E-16 132.3 31.3 255 36-393 15-307 (328)
192 3dsm_A Uncharacterized protein 99.5 1.6E-11 5.6E-16 133.9 29.2 251 16-371 44-319 (328)
193 2qc5_A Streptogramin B lactona 99.5 3.1E-10 1.1E-14 119.4 37.1 267 12-380 16-289 (300)
194 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 3.8E-11 1.3E-15 127.9 28.7 249 9-352 11-299 (314)
195 2mad_H Methylamine dehydrogena 99.4 4.1E-10 1.4E-14 125.6 37.4 248 20-359 70-357 (373)
196 3no2_A Uncharacterized protein 99.4 2.9E-11 9.8E-16 129.2 25.5 216 69-380 4-230 (276)
197 1rwi_B Serine/threonine-protei 99.4 4.6E-11 1.6E-15 124.5 26.3 230 60-387 25-263 (270)
198 2z2n_A Virginiamycin B lyase; 99.4 7.2E-10 2.5E-14 116.5 35.3 240 13-354 54-297 (299)
199 1yr2_A Prolyl oligopeptidase; 99.4 4.6E-11 1.6E-15 144.8 29.5 255 25-380 116-424 (741)
200 3sjl_D Methylamine dehydrogena 99.4 2.5E-10 8.7E-15 127.5 33.0 299 21-372 38-382 (386)
201 1qks_A Cytochrome CD1 nitrite 99.4 3E-10 1E-14 133.6 35.3 297 15-362 196-548 (567)
202 1yr2_A Prolyl oligopeptidase; 99.4 1.5E-11 5.1E-16 149.0 23.4 241 14-354 161-443 (741)
203 3g4e_A Regucalcin; six bladed 99.4 4.9E-10 1.7E-14 120.0 30.4 236 12-342 9-261 (297)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 5.7E-10 1.9E-14 118.7 30.3 227 55-380 14-285 (314)
205 2mad_H Methylamine dehydrogena 99.3 3.9E-09 1.3E-13 117.6 37.6 264 23-386 28-348 (373)
206 3hrp_A Uncharacterized protein 99.3 1.1E-09 3.7E-14 123.6 31.9 248 16-350 131-408 (409)
207 3c75_H MADH, methylamine dehyd 99.3 1.1E-09 3.8E-14 124.1 30.0 283 27-359 83-409 (426)
208 2ghs_A AGR_C_1268P; regucalcin 99.3 6E-09 2E-13 113.3 32.0 228 17-343 50-292 (326)
209 3dr2_A Exported gluconolactona 99.2 2.3E-09 8E-14 115.0 28.3 240 7-349 36-303 (305)
210 3g4e_A Regucalcin; six bladed 99.2 7.1E-09 2.4E-13 110.9 31.5 236 55-380 9-259 (297)
211 2qc5_A Streptogramin B lactona 99.2 1.9E-08 6.7E-13 105.5 33.5 152 13-168 59-213 (300)
212 3hrp_A Uncharacterized protein 99.2 7.6E-09 2.6E-13 116.7 32.1 227 59-380 131-397 (409)
213 3iuj_A Prolyl endopeptidase; h 99.2 9.5E-10 3.2E-14 132.3 24.2 146 13-162 126-299 (693)
214 2qe8_A Uncharacterized protein 99.2 3E-09 1E-13 116.5 26.0 270 16-344 17-312 (343)
215 1xip_A Nucleoporin NUP159; bet 99.1 3.8E-10 1.3E-14 126.4 14.8 174 17-218 39-236 (388)
216 2ghs_A AGR_C_1268P; regucalcin 99.1 4.1E-08 1.4E-12 106.7 30.3 218 60-380 50-289 (326)
217 3sjl_D Methylamine dehydrogena 99.1 2.2E-08 7.6E-13 111.8 28.0 270 9-333 73-384 (386)
218 1mda_H Methylamine dehydrogena 99.1 8E-09 2.7E-13 115.0 23.2 281 30-372 34-365 (368)
219 3dr2_A Exported gluconolactona 99.1 1.7E-08 5.8E-13 108.3 24.9 240 50-380 36-294 (305)
220 1yiq_A Quinohemoprotein alcoho 99.1 2.9E-08 1E-12 119.5 29.4 295 28-381 121-536 (689)
221 1xip_A Nucleoporin NUP159; bet 99.1 4.3E-09 1.5E-13 117.8 20.1 169 102-380 39-231 (388)
222 1kb0_A Quinohemoprotein alcoho 99.1 2.6E-08 8.8E-13 119.7 28.2 288 28-380 128-537 (677)
223 3iuj_A Prolyl endopeptidase; h 99.0 7.9E-09 2.7E-13 124.3 22.8 225 56-380 126-388 (693)
224 2qe8_A Uncharacterized protein 99.0 1.8E-08 6.3E-13 110.2 22.5 253 59-380 17-308 (343)
225 2hz6_A Endoplasmic reticulum t 99.0 2.3E-10 7.8E-15 127.2 5.8 143 27-189 8-152 (369)
226 3c75_H MADH, methylamine dehyd 98.9 2.4E-08 8.3E-13 113.1 19.9 253 68-386 82-400 (426)
227 3q7m_A Lipoprotein YFGL, BAMB; 98.9 1.8E-06 6E-11 94.9 34.1 284 28-380 53-366 (376)
228 3hxj_A Pyrrolo-quinoline quino 98.8 4.5E-08 1.5E-12 104.7 16.1 250 17-380 61-312 (330)
229 2hz6_A Endoplasmic reticulum t 98.8 8.1E-10 2.8E-14 122.8 2.5 187 69-360 8-200 (369)
230 1kb0_A Quinohemoprotein alcoho 98.8 3.5E-07 1.2E-11 109.8 24.9 133 28-164 77-264 (677)
231 2ece_A 462AA long hypothetical 98.8 1.4E-06 4.8E-11 98.4 28.0 224 68-386 93-407 (462)
232 2ece_A 462AA long hypothetical 98.8 1.7E-06 5.7E-11 97.8 27.8 142 25-168 93-284 (462)
233 1npe_A Nidogen, entactin; glyc 98.8 9.8E-06 3.4E-10 84.7 32.2 151 17-168 37-193 (267)
234 1fwx_A Nitrous oxide reductase 98.8 4.9E-07 1.7E-11 105.3 23.2 291 30-380 17-405 (595)
235 1fwx_A Nitrous oxide reductase 98.8 1.4E-07 4.6E-12 110.0 18.3 229 27-342 100-407 (595)
236 1npe_A Nidogen, entactin; glyc 98.8 1.4E-05 4.7E-10 83.6 32.3 245 29-372 2-259 (267)
237 3hxj_A Pyrrolo-quinoline quino 98.7 9E-07 3.1E-11 94.5 23.2 217 28-352 107-324 (330)
238 1yiq_A Quinohemoprotein alcoho 98.7 1.2E-06 4E-11 105.5 25.9 102 37-138 182-345 (689)
239 3q7m_A Lipoprotein YFGL, BAMB; 98.6 5.3E-06 1.8E-10 91.0 26.2 257 27-349 102-375 (376)
240 1kv9_A Type II quinohemoprotei 98.6 6.9E-06 2.4E-10 98.4 28.3 150 28-190 117-337 (668)
241 2iwa_A Glutamine cyclotransfer 98.6 1.1E-05 3.8E-10 85.5 26.3 208 49-353 10-238 (266)
242 1mda_H Methylamine dehydrogena 98.6 4.9E-07 1.7E-11 100.5 16.3 259 8-332 59-366 (368)
243 4a2l_A BT_4663, two-component 98.5 0.00015 5E-09 88.3 37.1 312 18-388 133-480 (795)
244 2iwa_A Glutamine cyclotransfer 98.5 1.9E-05 6.5E-10 83.7 24.7 162 8-189 12-184 (266)
245 2ad6_A Methanol dehydrogenase 98.5 3E-05 1E-09 91.1 28.5 147 28-189 115-338 (571)
246 4a2l_A BT_4663, two-component 98.5 0.00041 1.4E-08 84.3 39.1 270 16-387 263-570 (795)
247 3nol_A Glutamine cyclotransfer 98.5 2.9E-05 9.9E-10 81.7 24.3 197 49-343 32-245 (262)
248 2fp8_A Strictosidine synthase; 98.4 0.00011 3.7E-09 79.0 28.1 149 16-168 19-211 (322)
249 1flg_A Protein (quinoprotein e 98.4 6.5E-05 2.2E-09 88.5 28.4 150 28-190 117-359 (582)
250 2p4o_A Hypothetical protein; p 98.4 0.00033 1.1E-08 74.8 31.6 155 8-168 25-193 (306)
251 1w6s_A Methanol dehydrogenase 98.4 4.3E-05 1.5E-09 90.2 25.9 144 31-189 124-345 (599)
252 2fp8_A Strictosidine synthase; 98.3 0.00018 6.1E-09 77.3 27.8 99 59-159 19-143 (322)
253 3nol_A Glutamine cyclotransfer 98.3 0.00011 3.7E-09 77.4 23.0 190 91-384 32-246 (262)
254 3v64_C Agrin; beta propeller, 98.2 0.0016 5.6E-08 71.3 32.9 150 15-168 33-186 (349)
255 3v9f_A Two-component system se 98.2 0.0031 1E-07 76.4 38.6 300 16-380 211-556 (781)
256 1kv9_A Type II quinohemoprotei 98.2 0.00017 5.8E-09 86.3 27.0 103 37-139 177-341 (668)
257 3mbr_X Glutamine cyclotransfer 98.2 0.00036 1.2E-08 72.7 25.4 197 49-343 10-224 (243)
258 3v9f_A Two-component system se 98.2 0.0039 1.3E-07 75.5 38.8 302 16-380 163-512 (781)
259 3nok_A Glutaminyl cyclase; bet 98.2 0.00011 3.7E-09 77.5 21.5 158 9-189 47-213 (268)
260 3nok_A Glutaminyl cyclase; bet 98.2 0.00015 5.2E-09 76.4 22.1 195 49-342 44-254 (268)
261 3v65_B Low-density lipoprotein 98.2 0.0016 5.6E-08 72.3 32.0 148 17-168 78-229 (386)
262 1w6s_A Methanol dehydrogenase 98.1 0.00032 1.1E-08 82.8 26.1 111 28-140 62-200 (599)
263 1k3i_A Galactose oxidase precu 98.1 7.3E-05 2.5E-09 89.1 20.8 165 20-188 190-380 (656)
264 2ad6_A Methanol dehydrogenase 98.1 0.0003 1E-08 82.6 25.6 110 29-139 161-343 (571)
265 2p4o_A Hypothetical protein; p 98.1 0.0019 6.7E-08 68.8 29.5 240 49-380 23-275 (306)
266 1ijq_A LDL receptor, low-densi 98.1 0.01 3.4E-07 63.8 34.7 137 30-168 3-147 (316)
267 1flg_A Protein (quinoprotein e 98.0 0.00051 1.8E-08 80.8 25.2 110 30-140 170-364 (582)
268 3qqz_A Putative uncharacterize 98.0 0.0013 4.5E-08 69.1 25.4 199 9-211 20-239 (255)
269 3p5b_L Low density lipoprotein 98.0 0.012 4E-07 65.7 34.7 138 29-168 84-229 (400)
270 2xbg_A YCF48-like protein; pho 98.0 0.015 5.1E-07 62.8 34.4 269 5-380 26-310 (327)
271 3mbr_X Glutamine cyclotransfer 98.0 0.0011 3.7E-08 69.1 24.0 190 91-384 10-225 (243)
272 2xe4_A Oligopeptidase B; hydro 98.0 0.00064 2.2E-08 82.4 25.9 140 17-161 175-337 (751)
273 3v64_C Agrin; beta propeller, 97.9 0.0057 1.9E-07 66.9 29.2 153 15-168 72-229 (349)
274 3tc9_A Hypothetical hydrolase; 97.9 0.0026 8.9E-08 71.8 26.9 148 17-168 138-296 (430)
275 3v65_B Low-density lipoprotein 97.9 0.0048 1.6E-07 68.5 28.2 155 14-168 114-272 (386)
276 4hw6_A Hypothetical protein, I 97.9 0.005 1.7E-07 69.6 28.0 149 17-168 140-299 (433)
277 1ijq_A LDL receptor, low-densi 97.8 0.018 6.3E-07 61.7 31.2 154 14-168 28-190 (316)
278 3p5b_L Low density lipoprotein 97.8 0.02 7E-07 63.8 32.6 157 12-168 108-272 (400)
279 3sov_A LRP-6, low-density lipo 97.8 0.011 3.6E-07 64.0 28.7 137 30-168 6-149 (318)
280 2xe4_A Oligopeptidase B; hydro 97.8 0.00087 3E-08 81.2 21.7 100 60-162 175-290 (751)
281 3qqz_A Putative uncharacterize 97.7 0.0082 2.8E-07 63.0 24.8 116 52-168 20-146 (255)
282 3s94_A LRP-6, low-density lipo 97.7 0.18 6.1E-06 59.6 38.9 336 16-378 84-450 (619)
283 3m0c_C LDL receptor, low-densi 97.7 0.027 9.3E-07 68.4 31.8 137 30-168 397-541 (791)
284 3s94_A LRP-6, low-density lipo 97.7 0.19 6.4E-06 59.4 40.5 154 15-168 39-197 (619)
285 3kya_A Putative phosphatase; s 97.6 0.011 3.9E-07 67.7 26.6 151 17-168 140-336 (496)
286 3sov_A LRP-6, low-density lipo 97.6 0.025 8.6E-07 61.0 26.7 152 17-168 36-192 (318)
287 3amr_A 3-phytase; beta-propell 97.4 0.023 7.7E-07 62.2 23.9 196 69-360 39-272 (355)
288 2xzh_A Clathrin heavy chain 1; 97.4 0.17 5.7E-06 54.8 29.3 120 20-145 71-202 (365)
289 4a0p_A LRP6, LRP-6, low-densit 97.4 0.28 9.5E-06 58.0 34.6 132 29-161 7-141 (628)
290 3m0c_C LDL receptor, low-densi 97.4 0.1 3.5E-06 63.4 31.3 158 11-168 419-584 (791)
291 2ism_A Putative oxidoreductase 97.3 0.077 2.6E-06 57.9 27.5 101 58-161 30-153 (352)
292 2ism_A Putative oxidoreductase 97.3 0.046 1.6E-06 59.7 25.6 108 7-118 22-152 (352)
293 3ei3_A DNA damage-binding prot 97.3 0.4 1.4E-05 60.7 36.4 114 16-134 514-641 (1158)
294 4hw6_A Hypothetical protein, I 97.2 0.11 3.8E-06 58.4 27.9 106 60-168 140-254 (433)
295 2xbg_A YCF48-like protein; pho 97.2 0.19 6.6E-06 53.9 28.0 145 15-168 79-229 (327)
296 1k3i_A Galactose oxidase precu 97.2 0.0042 1.4E-07 73.8 16.0 117 17-135 244-382 (656)
297 3tc9_A Hypothetical hydrolase; 97.1 0.02 6.9E-07 64.5 20.7 60 102-162 138-198 (430)
298 1bpo_A Protein (clathrin); cla 97.1 0.27 9.1E-06 55.1 28.6 125 20-150 70-206 (494)
299 3a9g_A Putative uncharacterize 97.1 0.21 7.2E-06 54.5 27.6 111 6-119 19-153 (354)
300 2p9w_A MAL S 1 allergenic prot 97.0 0.021 7.3E-07 61.9 18.5 157 11-168 8-210 (334)
301 1n7d_A LDL receptor, low-densi 97.0 0.0014 4.8E-08 78.8 10.3 122 37-159 385-512 (699)
302 3amr_A 3-phytase; beta-propell 97.0 0.095 3.2E-06 57.3 23.2 137 27-168 39-205 (355)
303 3a9g_A Putative uncharacterize 96.9 0.61 2.1E-05 50.8 29.7 102 58-161 28-153 (354)
304 2vpj_A Kelch-like protein 12; 96.9 0.039 1.3E-06 58.0 19.3 104 27-134 14-140 (301)
305 1bpo_A Protein (clathrin); cla 96.9 0.82 2.8E-05 51.2 36.3 247 37-380 47-319 (494)
306 1n7d_A LDL receptor, low-densi 96.9 0.0022 7.7E-08 77.0 10.3 153 16-168 406-566 (699)
307 2xzh_A Clathrin heavy chain 1; 96.8 0.74 2.5E-05 49.8 32.1 247 37-380 48-320 (365)
308 4a0p_A LRP6, LRP-6, low-densit 96.8 1.3 4.3E-05 52.3 40.9 150 16-168 80-232 (628)
309 2p9w_A MAL S 1 allergenic prot 96.8 0.23 7.8E-06 53.8 24.0 115 54-168 8-163 (334)
310 2g8s_A Glucose/sorbosone dehyd 96.7 0.31 1.1E-05 53.1 24.6 147 8-158 10-213 (353)
311 2xn4_A Kelch-like protein 2; s 96.5 0.2 7E-06 52.5 21.1 105 27-134 15-136 (302)
312 3ei3_A DNA damage-binding prot 96.5 1.4 4.8E-05 55.8 31.8 151 15-168 553-719 (1158)
313 3ii7_A Kelch-like protein 7; p 96.4 0.43 1.5E-05 50.1 23.1 104 28-134 12-130 (306)
314 3kya_A Putative phosphatase; s 95.9 0.31 1.1E-05 55.8 20.0 62 103-164 141-214 (496)
315 2g8s_A Glucose/sorbosone dehyd 95.8 2.6 9.1E-05 45.6 26.3 103 59-162 18-149 (353)
316 1zgk_A Kelch-like ECH-associat 95.8 0.28 9.6E-06 51.8 17.8 104 27-134 24-149 (308)
317 3pbp_A Nucleoporin NUP82; beta 95.7 0.51 1.7E-05 52.8 19.8 139 27-168 31-207 (452)
318 3ott_A Two-component system se 95.7 4.9 0.00017 47.9 33.2 140 15-168 21-169 (758)
319 2vpj_A Kelch-like protein 12; 95.7 0.44 1.5E-05 49.8 18.7 60 294-355 162-234 (301)
320 1xi4_A Clathrin heavy chain; a 95.6 1.2 4E-05 56.8 24.6 118 37-161 47-169 (1630)
321 4asc_A Kelch repeat and BTB do 95.6 1.7 5.7E-05 45.8 23.1 100 30-133 7-128 (315)
322 3das_A Putative oxidoreductase 95.5 3.5 0.00012 44.8 29.5 116 3-119 19-158 (347)
323 2xn4_A Kelch-like protein 2; s 95.4 1.3 4.5E-05 46.2 21.3 62 71-134 17-89 (302)
324 3ii7_A Kelch-like protein 7; p 95.4 1.4 4.7E-05 46.0 21.2 105 27-134 55-181 (306)
325 3sre_A PON1, serum paraoxonase 95.2 2.1 7.2E-05 46.7 22.5 107 54-160 45-182 (355)
326 3das_A Putative oxidoreductase 94.9 5.3 0.00018 43.4 31.2 111 52-162 25-159 (347)
327 3sre_A PON1, serum paraoxonase 94.8 2.6 8.8E-05 46.1 21.9 75 302-380 203-284 (355)
328 1xi4_A Clathrin heavy chain; a 94.8 0.76 2.6E-05 58.5 19.4 122 22-149 72-205 (1630)
329 2be1_A Serine/threonine-protei 94.8 0.59 2E-05 50.9 16.3 113 28-140 10-139 (339)
330 3pbp_A Nucleoporin NUP82; beta 94.5 1.6 5.6E-05 48.7 19.3 105 67-186 29-158 (452)
331 2woz_A Kelch repeat and BTB do 94.5 3.3 0.00011 43.5 21.3 101 30-134 18-139 (318)
332 1zgk_A Kelch-like ECH-associat 94.2 1.7 5.7E-05 45.7 18.1 60 294-355 171-243 (308)
333 4asc_A Kelch repeat and BTB do 94.2 1.9 6.4E-05 45.4 18.5 125 5-133 24-176 (315)
334 3sbq_A Nitrous-oxide reductase 94.0 5.4 0.00019 46.0 22.4 93 27-120 141-256 (638)
335 3ott_A Two-component system se 94.0 13 0.00046 44.1 35.6 144 16-168 63-215 (758)
336 1cru_A Protein (soluble quinop 93.9 2.6 8.8E-05 47.6 19.9 111 8-119 19-162 (454)
337 3sbq_A Nitrous-oxide reductase 93.8 9.9 0.00034 43.9 24.0 91 30-120 72-196 (638)
338 2woz_A Kelch repeat and BTB do 93.7 4.4 0.00015 42.5 20.5 105 27-134 56-187 (318)
339 2uvk_A YJHT; unknown function, 93.7 1.1 3.9E-05 47.9 15.9 55 303-359 286-349 (357)
340 1tl2_A L10, protein (tachylect 93.6 0.48 1.6E-05 48.4 11.6 143 16-168 41-205 (236)
341 1cru_A Protein (soluble quinop 93.3 13 0.00043 41.8 30.2 105 58-162 26-163 (454)
342 3s25_A Hypothetical 7-bladed b 91.3 17 0.00057 38.5 26.9 127 27-168 24-171 (302)
343 2uvk_A YJHT; unknown function, 90.6 5.7 0.0002 42.2 16.6 64 69-133 19-97 (357)
344 2zwa_A Leucine carboxyl methyl 88.0 16 0.00056 43.2 19.4 108 27-134 397-525 (695)
345 3s25_A Hypothetical 7-bladed b 83.1 49 0.0017 34.7 25.7 128 21-163 58-204 (302)
346 1tl2_A L10, protein (tachylect 81.4 2.7 9.1E-05 42.9 7.0 133 28-168 4-158 (236)
347 2be1_A Serine/threonine-protei 71.2 9.5 0.00032 41.3 8.4 107 71-190 11-134 (339)
348 3uc1_A DNA gyrase subunit A; D 71.2 1.1E+02 0.0038 32.5 18.4 151 16-168 95-274 (327)
349 2zwa_A Leucine carboxyl methyl 70.5 66 0.0023 37.9 16.4 106 27-133 451-579 (695)
350 3qhy_B Beta-lactamase inhibito 70.4 1E+02 0.0035 31.8 18.5 139 17-168 25-163 (282)
351 2wg3_C Hedgehog-interacting pr 69.6 1.5E+02 0.005 33.2 29.0 112 9-121 7-159 (463)
352 3b7f_A Glycosyl hydrolase, BNR 63.3 1.6E+02 0.0055 31.4 17.2 147 15-164 54-254 (394)
353 3l6v_A GYRA, DNA gyrase subuni 61.3 1.8E+02 0.0063 31.4 24.3 139 27-168 6-175 (370)
354 2wg3_C Hedgehog-interacting pr 59.0 2.2E+02 0.0077 31.6 26.8 106 59-164 14-160 (463)
355 4gq2_M Nucleoporin NUP120; bet 58.9 1.1E+02 0.0039 37.5 15.7 39 59-97 236-274 (950)
356 3no0_A DNA gyrase subunit A; D 56.5 1.8E+02 0.0063 29.9 18.5 147 15-165 67-236 (276)
357 1zi0_A DNA gyrase subunit A; b 51.1 2.3E+02 0.008 29.5 24.4 139 27-168 2-171 (307)
358 4gq2_M Nucleoporin NUP120; bet 50.2 1.3E+02 0.0043 37.1 14.1 38 102-139 237-274 (950)
359 3b7f_A Glycosyl hydrolase, BNR 49.3 2.6E+02 0.0087 29.7 15.2 138 28-168 22-203 (394)
360 1sqj_A OXG-RCBH, oligoxylogluc 44.4 4.7E+02 0.016 31.1 19.7 159 6-168 6-196 (789)
361 3no0_A DNA gyrase subunit A; D 43.5 2.9E+02 0.0099 28.4 21.4 157 8-168 13-191 (276)
362 3uc1_A DNA gyrase subunit A; D 42.4 3.3E+02 0.011 28.7 21.5 148 17-168 43-223 (327)
363 3qhy_B Beta-lactamase inhibito 41.7 3E+02 0.01 28.1 20.0 100 60-168 25-124 (282)
364 4fhn_B Nucleoporin NUP120; pro 41.3 2.1E+02 0.0071 35.9 14.3 38 102-139 239-276 (1139)
365 4a9v_A PHOX; hydrolase, beta-p 40.6 3.2E+02 0.011 31.5 14.4 61 59-119 476-549 (592)
366 4hvt_A Ritya.17583.B, post-pro 35.3 6.1E+02 0.021 29.8 22.5 80 300-380 318-413 (711)
367 1suu_A DNA gyrase subunit A; t 34.3 4.2E+02 0.014 27.6 26.0 139 27-168 7-176 (312)
368 4fhn_B Nucleoporin NUP120; pro 34.2 83 0.0028 39.5 9.1 38 60-97 239-276 (1139)
369 1juq_A ADP-ribosylation factor 33.9 31 0.0011 33.4 4.0 48 784-831 33-90 (171)
370 2cn3_A Xyloglucanase, beta-1,4 33.7 6.4E+02 0.022 29.5 17.2 114 6-120 13-152 (737)
371 1zi0_A DNA gyrase subunit A; b 32.8 4.4E+02 0.015 27.3 18.7 151 16-168 95-272 (307)
372 3q6k_A 43.2 kDa salivary prote 32.8 5.1E+02 0.017 28.1 20.6 151 16-168 87-301 (381)
373 3zwu_A Alkaline phosphatase PH 30.4 1.2E+02 0.0039 35.3 8.7 58 278-340 478-548 (592)
374 3f7f_A Nucleoporin NUP120; nuc 29.8 1.8E+02 0.0063 34.4 10.3 37 60-98 223-259 (729)
375 1suu_A DNA gyrase subunit A; t 28.8 5.1E+02 0.018 26.9 19.8 112 17-130 101-230 (312)
376 1mhq_A ADP-ribosylation factor 28.7 47 0.0016 31.2 4.2 47 785-831 22-78 (148)
377 1x5b_A Signal transducing adap 27.8 50 0.0017 31.6 4.3 48 784-831 35-92 (163)
378 3qil_A Clathrin heavy chain 1; 26.1 15 0.00053 33.4 0.3 56 479-536 32-92 (125)
379 4a9v_A PHOX; hydrolase, beta-p 25.3 2E+02 0.0067 33.3 9.2 62 275-341 475-549 (592)
380 3f7f_A Nucleoporin NUP120; nuc 24.7 1E+02 0.0035 36.5 6.9 38 16-56 222-259 (729)
381 3zwu_A Alkaline phosphatase PH 23.7 1.7E+02 0.0057 34.0 8.4 59 60-118 477-548 (592)
382 3l6v_A GYRA, DNA gyrase subuni 23.7 7E+02 0.024 26.7 19.2 151 16-168 99-311 (370)
383 3q6k_A 43.2 kDa salivary prote 22.0 7.7E+02 0.026 26.6 22.5 121 17-138 27-197 (381)
384 4hvt_A Ritya.17583.B, post-pro 21.1 1E+03 0.036 27.8 23.0 111 18-130 131-277 (711)
385 2rfe_E ERBB receptor feedback 20.4 40 0.0014 24.3 1.3 24 642-672 2-25 (40)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.5e-40 Score=371.50 Aligned_cols=302 Identities=22% Similarity=0.379 Sum_probs=268.2
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
...+.+|.+.|++++|+| ++.+|++|+.||+|+|||+.+++....+.+|...|.+++|+|++++|++|+.|++|++||+
T Consensus 101 ~~~l~gh~~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp SCEEECCSSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred eEeecccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 356889999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 88 ~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
.+++++..+.+|...|.+++|+|++++|++|+.|+.|++||++++.++..+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 180 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~ 247 (845)
+ ||+.++.. ...+.+|... +
T Consensus 260 v-------------wd~~~~~~--------------------~~~~~~h~~~-------v-------------------- 279 (410)
T 1vyh_C 260 V-------------WVVATKEC--------------------KAELREHRHV-------V-------------------- 279 (410)
T ss_dssp E-------------EETTTCCE--------------------EEEECCCSSC-------E--------------------
T ss_pred E-------------EECCCCce--------------------eeEecCCCce-------E--------------------
Confidence 9 99998877 6667777766 6
Q ss_pred hccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEE
Q psy467 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRR 327 (845)
Q Consensus 248 ~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vts 327 (845)
.++.|+|++..... .............++. +|++|+.|+.|++||+.++.++.++.+|...|++
T Consensus 280 -------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~-----~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~ 343 (410)
T 1vyh_C 280 -------ECISWAPESSYSSI----SEATGSETKKSGKPGP-----FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343 (410)
T ss_dssp -------EEEEECCSCGGGGG----GGCCSCC-------CC-----EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred -------EEEEEcCcccccch----hhhccccccccCCCCC-----EEEEEeCCCeEEEEECCCCceEEEEECCCCcEEE
Confidence 77888877542100 0000111122233455 8999999999999999999999999999999999
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEee
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSH 386 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~ 386 (845)
++|+|+|++|++|+.|+ |++||+.+++++..+.+|...|++++|+ ++.+|+++ |.+|..
T Consensus 344 v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 344 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 99999999999999999 9999999999999999999999999999 88888777 999964
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.2e-39 Score=348.95 Aligned_cols=288 Identities=22% Similarity=0.325 Sum_probs=254.5
Q ss_pred eeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEE
Q psy467 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 5 lw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~V 84 (845)
+...++|.+|.+.|++++|+| ++++|++|+.||+|++||+.++..+..+..|..+|.+++|+|++++|++|+.|++|++
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred ceeEEeecCCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEE
Confidence 344568999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEec-CCCEEEEEeC
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSP-DGQWIASGGE 162 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSP-dg~~Lasgs~ 162 (845)
||+.+++.+..+.+|...|.+++|+|++++|++|+.||+|++||++++ .....+.+|...|.+++|+| ++.+|++|+.
T Consensus 82 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred EECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999877 45677889999999999999 6789999999
Q ss_pred CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe-cCCCCCccceeeEeeeccccccccccc
Q psy467 163 DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT-KGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 163 DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~-~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
|+.|++ ||+.++.. ...+. ++... +
T Consensus 162 D~~v~i-------------wd~~~~~~--------------------~~~~~~~~~~~-------v-------------- 187 (304)
T 2ynn_A 162 DRTVKV-------------WSLGQSTP--------------------NFTLTTGQERG-------V-------------- 187 (304)
T ss_dssp TSEEEE-------------EETTCSSC--------------------SEEEECCCTTC-------E--------------
T ss_pred CCeEEE-------------EECCCCCc--------------------cceeccCCcCc-------E--------------
Confidence 999999 99987655 22222 22222 3
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN 321 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh 321 (845)
..+.|+|. +++. +|++|+.|+.|++||+++++++.++.+|
T Consensus 188 -------------~~~~~~~~----------------------~~~~-----~l~s~s~D~~i~iWd~~~~~~~~~~~~h 227 (304)
T 2ynn_A 188 -------------NYVDYYPL----------------------PDKP-----YMITASDDLTIKIWDYQTKSCVATLEGH 227 (304)
T ss_dssp -------------EEEEECCS----------------------TTCC-----EEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred -------------EEEEEEEc----------------------CCCC-----EEEEEcCCCeEEEEeCCCCccceeeCCC
Confidence 44455442 1233 8999999999999999999999999999
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCc--eEEEE----EEEEeeC
Q psy467 322 SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQ--LWFRR----VGTWSHQ 387 (845)
Q Consensus 322 ~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~--lLaaS----VsiW~~d 387 (845)
...|.+++|+|++++|++|+.|+ |+|||+.+++++..+..|...+++++|+ ++. +++++ +.+|.+.
T Consensus 228 ~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~ 301 (304)
T 2ynn_A 228 MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC
T ss_pred CCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEec
Confidence 99999999999999999999999 9999999999999999999999999998 553 46666 6777654
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.7e-39 Score=350.82 Aligned_cols=283 Identities=19% Similarity=0.312 Sum_probs=256.7
Q ss_pred eEEeccCCCcEEEEEEecC---CCCEEEEEeCCCeEEEEECCCCee--EEEecCCCCCeEEEEEcCCCCEEEEEECCCcE
Q psy467 8 AEDFMAHGASVNCLALGKK---SGQVLATGGDDKKVNLWALGKSNC--IMSLSGHSTPVESVQFGNGEETLSAGCQSGSI 82 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~---dg~~LaTgs~DG~I~IWdl~t~~~--i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV 82 (845)
.+.+.+|.+.|++++|+|+ ++.+|++|+.|++|+||++.+++. ...+.+|...|.+++|++++.++++++.|++|
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 104 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 3677899999999999873 467999999999999999977654 45689999999999999999999999999999
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~ 162 (845)
++||+.+++.+..+..|...+.+++|+|++++|++++.||.|++||+++++....+..+...|.+++|+|++++|++++.
T Consensus 105 ~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~ 184 (321)
T 3ow8_A 105 RLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAI 184 (321)
T ss_dssp EEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcC
Confidence 99999999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 163 DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 163 DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
||.|++ ||+++++. +..+.+|... |
T Consensus 185 dg~i~i-------------wd~~~~~~--------------------~~~~~~h~~~-------v--------------- 209 (321)
T 3ow8_A 185 DGIINI-------------FDIATGKL--------------------LHTLEGHAMP-------I--------------- 209 (321)
T ss_dssp TSCEEE-------------EETTTTEE--------------------EEEECCCSSC-------C---------------
T ss_pred CCeEEE-------------EECCCCcE--------------------EEEEcccCCc-------e---------------
Confidence 999999 99998877 6666666555 4
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS 322 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~ 322 (845)
.+++|+|++. +|++|+.|+.|++||+++++++.++.+|.
T Consensus 210 ------------~~l~~spd~~-----------------------------~l~s~s~dg~i~iwd~~~~~~~~~~~~h~ 248 (321)
T 3ow8_A 210 ------------RSLTFSPDSQ-----------------------------LLVTASDDGYIKIYDVQHANLAGTLSGHA 248 (321)
T ss_dssp ------------CEEEECTTSC-----------------------------EEEEECTTSCEEEEETTTCCEEEEECCCS
T ss_pred ------------eEEEEcCCCC-----------------------------EEEEEcCCCeEEEEECCCcceeEEEcCCC
Confidence 5566666655 99999999999999999999999999999
Q ss_pred CCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEee
Q psy467 323 STIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSH 386 (845)
Q Consensus 323 ~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~ 386 (845)
..|.+++|+|+|++|++++.|+ |+|||+.+++++.++.+|.+.|++++|+ ++++|+++ |.+|..
T Consensus 249 ~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 249 SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 9999999999999999999999 9999999999999999999999999999 88888776 899963
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.5e-38 Score=346.22 Aligned_cols=282 Identities=21% Similarity=0.306 Sum_probs=256.5
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
...++|.+|.+.|++++|+| ++++|++|+.||+|++||..+++.+..+..|...|.+++|+|++++|++|+.|+.|++|
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~-d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGT-DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp CEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred hhheeecCCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 44678999999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCC----cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe
Q psy467 86 NLAVP----TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 86 Dl~tg----~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs 161 (845)
++.++ .....+.+|.+.|.++.|++++ .+++++.|+.|++||+.+++++..+.+|...|.+++|+|+++++++|+
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~ 203 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGA 203 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEe
Confidence 99875 4567788999999999999887 489999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
.|+.|++ ||++++.. +..+.+|... |
T Consensus 204 ~d~~v~~-------------wd~~~~~~--------------------~~~~~~h~~~-------v-------------- 229 (340)
T 1got_B 204 CDASAKL-------------WDVREGMC--------------------RQTFTGHESD-------I-------------- 229 (340)
T ss_dssp TTSCEEE-------------EETTTCSE--------------------EEEECCCSSC-------E--------------
T ss_pred CCCcEEE-------------EECCCCee--------------------EEEEcCCcCC-------E--------------
Confidence 9999999 99998777 6666666655 5
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC-
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK- 320 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g- 320 (845)
.+++|+|++. +|++|+.||.|++||+++++.+..+..
T Consensus 230 -------------~~v~~~p~~~-----------------------------~l~s~s~d~~v~iwd~~~~~~~~~~~~~ 267 (340)
T 1got_B 230 -------------NAICFFPNGN-----------------------------AFATGSDDATCRLFDLRADQELMTYSHD 267 (340)
T ss_dssp -------------EEEEECTTSS-----------------------------EEEEEETTSCEEEEETTTTEEEEEECCT
T ss_pred -------------EEEEEcCCCC-----------------------------EEEEEcCCCcEEEEECCCCcEEEEEccC
Confidence 6666666666 999999999999999999988877763
Q ss_pred -CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEe
Q psy467 321 -NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWS 385 (845)
Q Consensus 321 -h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~ 385 (845)
+...|++++|+|+|++|++|+.|+ |++||+.+++.+..+.+|.+.|++++|+ +|++|+++ |.+|.
T Consensus 268 ~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 268 NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 335799999999999999999999 9999999999999999999999999999 88888877 88883
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.7e-37 Score=340.79 Aligned_cols=283 Identities=18% Similarity=0.281 Sum_probs=256.0
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
...++|.+|.+.|+|++|+| ++++||+|+.||+|+|||..+++....+..|...|.+++|+|++.+|++|+.|+.+++|
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~-d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCK-DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp CEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred EEEEEecCCCCeEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 34678999999999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCC------cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec--CCCEE
Q psy467 86 NLAVP------TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP--DGQWI 157 (845)
Q Consensus 86 Dl~tg------~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP--dg~~L 157 (845)
++... .....+..|...|.+++|+|++..|++++.|++|++||+++++++..+.+|...|.+++|+| ++++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEE
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEE
Confidence 98643 34566778999999999999999999999999999999999999999999999999999988 57899
Q ss_pred EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccc
Q psy467 158 ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE 237 (845)
Q Consensus 158 asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~ 237 (845)
++|+.||.|++ ||+++++. +..+.+|... |
T Consensus 214 ~sgs~Dg~v~~-------------wd~~~~~~--------------------~~~~~~h~~~-------v---------- 243 (354)
T 2pbi_B 214 VSGGCDKKAMV-------------WDMRSGQC--------------------VQAFETHESD-------V---------- 243 (354)
T ss_dssp EEEETTSCEEE-------------EETTTCCE--------------------EEEECCCSSC-------E----------
T ss_pred EEEeCCCeEEE-------------EECCCCcE--------------------EEEecCCCCC-------e----------
Confidence 99999999999 99998877 6666666665 5
Q ss_pred ccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE
Q psy467 238 DQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST 317 (845)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t 317 (845)
.+++|+|++. +|++|+.|+.|++||+++++.+..
T Consensus 244 -----------------~~v~~~p~~~-----------------------------~l~s~s~D~~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 244 -----------------NSVRYYPSGD-----------------------------AFASGSDDATCRLYDLRADREVAI 277 (354)
T ss_dssp -----------------EEEEECTTSS-----------------------------EEEEEETTSCEEEEETTTTEEEEE
T ss_pred -----------------EEEEEeCCCC-----------------------------EEEEEeCCCeEEEEECCCCcEEEE
Confidence 6666666666 999999999999999999988877
Q ss_pred ecCC--CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEe
Q psy467 318 TEKN--SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWS 385 (845)
Q Consensus 318 l~gh--~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~ 385 (845)
+..+ ...+++++|+|+|++|++|+.|+ |++||+.+++.+..+.+|.+.|++++|+ +|++|+++ |.+|.
T Consensus 278 ~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 278 YSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 7643 34789999999999999999999 9999999999999999999999999999 89988887 88883
No 6
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.6e-37 Score=328.93 Aligned_cols=283 Identities=21% Similarity=0.421 Sum_probs=251.8
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
..++.+|.+.|++++|+| ++++|++|+.||.|++|+..+++....+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 16 ~~~~~gh~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEcccCCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 457899999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 88 ~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
.+++.+..+.+|...|.+++|+|++++|++|+.||.|++||+++++++..+..|...|.+++|+|++++|++++.||.|+
T Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 174 (312)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEec-CCCCCccceeeEeeecccccccccccchhhh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTK-GRPGGTKAKIDVTRIEENAESEDQAGEEELF 246 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~-h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~ 246 (845)
+ ||+++++. +..+.. +... +
T Consensus 175 ~-------------wd~~~~~~--------------------~~~~~~~~~~~-------~------------------- 195 (312)
T 4ery_A 175 I-------------WDTASGQC--------------------LKTLIDDDNPP-------V------------------- 195 (312)
T ss_dssp E-------------EETTTCCE--------------------EEEECCSSCCC-------E-------------------
T ss_pred E-------------EECCCCce--------------------eeEEeccCCCc-------e-------------------
Confidence 9 99988766 333221 1111 2
Q ss_pred hhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEE
Q psy467 247 ATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vt 326 (845)
..++|+|++. +|++++.|+.|++||+.+++++..+.+|...+.
T Consensus 196 --------~~~~~~~~~~-----------------------------~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 238 (312)
T 4ery_A 196 --------SFVKFSPNGK-----------------------------YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 238 (312)
T ss_dssp --------EEEEECTTSS-----------------------------EEEEEETTTEEEEEETTTTEEEEEECSSCCSSS
T ss_pred --------EEEEECCCCC-----------------------------EEEEEcCCCeEEEEECCCCcEEEEEEecCCceE
Confidence 3444555544 999999999999999999999999998866433
Q ss_pred E--EEE-eCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-------EEEEeeC
Q psy467 327 R--LTF-SEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-------VGTWSHQ 387 (845)
Q Consensus 327 s--laf-SpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-------VsiW~~d 387 (845)
+ ..+ .+++.+|++|+.|+ |++||+.+++.+..+.+|...|.+++|+ ++.+++++ |.+|..+
T Consensus 239 ~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 239 CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 2 234 46899999999999 9999999999999999999999999999 88887765 8899754
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.2e-37 Score=367.51 Aligned_cols=348 Identities=17% Similarity=0.237 Sum_probs=277.0
Q ss_pred EEeccCCCcEEEEEEecCCCC-EEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 9 EDFMAHGASVNCLALGKKSGQ-VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~-~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
..+.+|.+.|++++|+| ++. .|++|+.|++|++||..+++....+.+|...|.+++|+|++++|++|+.|++|++||+
T Consensus 141 ~~l~gh~~~v~~v~f~p-~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~ 219 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKP-SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG 219 (611)
T ss_dssp BCCCCCSSCEEEEEECS-SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ceecCCCCCceEEEECC-CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEEC
Confidence 56889999999999999 665 7999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEc-------CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE-----------------------
Q psy467 88 AVPTVQRTLN-------GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT----------------------- 137 (845)
Q Consensus 88 ~tg~~v~~l~-------~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~----------------------- 137 (845)
.+++.+..+. +|.+.|.+++|+|++++|++++.|++|++||+.+++++..
T Consensus 220 ~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 299 (611)
T 1nr0_A 220 VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVS 299 (611)
T ss_dssp TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEE
T ss_pred CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEE
Confidence 9999988884 7999999999999999999999999999999988765443
Q ss_pred --------------------EcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC---C
Q psy467 138 --------------------YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP---P 194 (845)
Q Consensus 138 --------------------~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~---~ 194 (845)
+.+|...|.+++|+|+|++|++++.|+.|++ ||+.++...... +
T Consensus 300 ~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~-------------Wd~~~~~~~~~~~~~h 366 (611)
T 1nr0_A 300 ISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINS-------------WDISTGISNRVFPDVH 366 (611)
T ss_dssp EETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE-------------EETTTCCEEECSSCSC
T ss_pred EeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEE-------------EECCCCceeeecccCC
Confidence 3468889999999999999999999999999 999988764432 4
Q ss_pred CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCC-------
Q psy467 195 PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNR------- 267 (845)
Q Consensus 195 ~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~------- 267 (845)
...+.++++++++.++.. . .+..+.+|.+......... .... ........++++|++....
T Consensus 367 ~~~v~~~~~s~~~~l~s~-s------~d~~v~~w~~~~~~~~~~~----~~~~-~~~~~~~~~~~s~dg~~~~~~~~~~v 434 (611)
T 1nr0_A 367 ATMITGIKTTSKGDLFTV-S------WDDHLKVVPAGGSGVDSSK----AVAN-KLSSQPLGLAVSADGDIAVAACYKHI 434 (611)
T ss_dssp SSCEEEEEECTTSCEEEE-E------TTTEEEEECSSSSSSCTTS----CCEE-ECSSCEEEEEECTTSSCEEEEESSEE
T ss_pred cceEEEEEECCCCcEEEE-E------cCCceEEeecCCccccccc----eeee-ecCCCCcEEEEeCCCcEEEEEeCceE
Confidence 567788899987754432 1 1122334443321110000 0000 0011125567777763210
Q ss_pred ----CC--cccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE--EEEecCCCCCEEEEEEeCCCCEEEE
Q psy467 268 ----SG--TCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL--VSTTEKNSSTIRRLTFSEGGECLLG 339 (845)
Q Consensus 268 ----~~--~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~--l~tl~gh~~~VtslafSpdG~~Las 339 (845)
.+ ....+...+.+++|+|||+ +|++|+.|+.|++||+.++.. +.. .+|...|++++|||||++|++
T Consensus 435 ~~~~~~~~~~~~~~~~v~~va~spdg~-----~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las 508 (611)
T 1nr0_A 435 AIYSHGKLTEVPISYNSSCVALSNDKQ-----FVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVA 508 (611)
T ss_dssp EEEETTEEEEEECSSCEEEEEECTTSC-----EEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEE
T ss_pred EEEeCCceeeeecCCCceEEEEeCCCC-----EEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEE
Confidence 00 1112346688999999999 999999999999999987654 334 679999999999999999999
Q ss_pred EeCCC-EEEEEecC-CceEEE--ecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCC
Q psy467 340 GDTEG-LKVYGWEP-ARQYDA--QPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 340 gs~DG-I~IWDl~t-gk~l~t--l~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~ 388 (845)
++.|+ |++|++.+ ++++.. +..|...|++++|+ ||++|+++ |.+|.++.
T Consensus 509 ~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 509 TDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp EETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred EcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 99999 99999988 665543 34599999999999 99999887 99998764
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.3e-36 Score=329.06 Aligned_cols=283 Identities=23% Similarity=0.368 Sum_probs=250.4
Q ss_pred eeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC-----CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCc
Q psy467 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK-----SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGS 81 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t-----~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGt 81 (845)
...+|.+|.+.|++++|+|+++++|++|+.|++|++|++.. +..+..+.+|...|.+++|+|++++|++|+.|++
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 35689999999999999995568999999999999999853 3457788999999999999999999999999999
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecC------CC
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD------GQ 155 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPd------g~ 155 (845)
|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|+.|++||++ +.++..+.+|...|.+++|+|. +.
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 167 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSV 167 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CC
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999996 5678888899999999999984 45
Q ss_pred EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccc
Q psy467 156 WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAE 235 (845)
Q Consensus 156 ~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~ 235 (845)
.+++++.|+.|++ ||+.+++. ...+.+|... |
T Consensus 168 ~l~s~~~d~~i~~-------------wd~~~~~~--------------------~~~~~~h~~~-------v-------- 199 (319)
T 3frx_A 168 TIISAGNDKMVKA-------------WNLNQFQI--------------------EADFIGHNSN-------I-------- 199 (319)
T ss_dssp EEEEEETTSCEEE-------------EETTTTEE--------------------EEEECCCCSC-------E--------
T ss_pred EEEEEeCCCEEEE-------------EECCcchh--------------------heeecCCCCc-------E--------
Confidence 8999999999999 99987766 5666666665 5
Q ss_pred ccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE
Q psy467 236 SEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV 315 (845)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l 315 (845)
.+++|+|++. +|++|+.||.|++||+.+++++
T Consensus 200 -------------------~~~~~sp~g~-----------------------------~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 200 -------------------NTLTASPDGT-----------------------------LIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp -------------------EEEEECTTSS-----------------------------EEEEEETTCEEEEEETTTTEEE
T ss_pred -------------------EEEEEcCCCC-----------------------------EEEEEeCCCeEEEEECCCCcEE
Confidence 6666666666 9999999999999999999999
Q ss_pred EEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecC--------CCCCeEEEEEc-CCceEEEE-----E
Q psy467 316 STTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPM--------GWGKVQDLAVT-GTQLWFRR-----V 381 (845)
Q Consensus 316 ~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~--------h~~~VtsVafS-dg~lLaaS-----V 381 (845)
..+..+ ..|.+++|+|++.+|++++.+++++|+++.+..+..+.. |...+.+++|+ ||++|+++ |
T Consensus 232 ~~~~~~-~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i 310 (319)
T 3frx_A 232 YTLSAQ-DEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVI 310 (319)
T ss_dssp EEEECC-SCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEecCC-CcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceE
Confidence 998864 689999999999999999988899999998877766543 35679999999 99999888 9
Q ss_pred EEEeeC
Q psy467 382 GTWSHQ 387 (845)
Q Consensus 382 siW~~d 387 (845)
.+|.+.
T Consensus 311 ~vWd~~ 316 (319)
T 3frx_A 311 RVWQVM 316 (319)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999764
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=331.92 Aligned_cols=294 Identities=21% Similarity=0.340 Sum_probs=242.9
Q ss_pred CcceeeeeEEeccCCC-cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEE---EecCCCCCeEEEEEcCCCCEEEEE
Q psy467 1 MRAKVEKAEDFMAHGA-SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIM---SLSGHSTPVESVQFGNGEETLSAG 76 (845)
Q Consensus 1 ~~irlw~l~~L~gH~~-~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~---~l~~h~~~V~sLafSpdg~~LaSg 76 (845)
|+-.+..++++.+|.+ .|++++|+| +|++||+|+.|++|+||++.++.... ...+|...|.+++|+|++++|++|
T Consensus 1 ~~~~~~~~~~~~~h~~~~v~~l~~sp-~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~ 79 (345)
T 3fm0_A 1 MKDSLVLLGRVPAHPDSRCWFLAWNP-AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA 79 (345)
T ss_dssp ---CEEEEEEECCSTTSCEEEEEECT-TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEE
T ss_pred CCccEEEeeeecCCCCCcEEEEEECC-CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEE
Confidence 4556677899999998 999999999 99999999999999999998876432 236899999999999999999999
Q ss_pred ECCCcEEEEECCCC--cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC---ceEEEEcCCCCCeEEEEEe
Q psy467 77 CQSGSIKIWNLAVP--TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK---GCIYTYRGHSKSINSIRFS 151 (845)
Q Consensus 77 s~DGtV~VWDl~tg--~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~---~~l~~~~~h~~~V~sLafS 151 (845)
+.|++|++||+.++ +.+..+.+|...|.+++|+|++++|++|+.|+.|++||+.++ .++..+..|...|.+++|+
T Consensus 80 s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 80 SFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp ETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred ECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEEC
Confidence 99999999999876 457788999999999999999999999999999999999865 3466788899999999999
Q ss_pred cCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 152 PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 152 Pdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
|++++|++++.|+.|++ ||..++.. .....+.+|... |
T Consensus 160 p~~~~l~s~s~d~~i~~-------------w~~~~~~~------------------~~~~~~~~h~~~-------v---- 197 (345)
T 3fm0_A 160 PSQELLASASYDDTVKL-------------YREEEDDW------------------VCCATLEGHEST-------V---- 197 (345)
T ss_dssp SSSSCEEEEETTSCEEE-------------EEEETTEE------------------EEEEEECCCSSC-------E----
T ss_pred CCCCEEEEEeCCCcEEE-------------EEecCCCE------------------EEEEEecCCCCc-------e----
Confidence 99999999999999999 99876543 003344555544 4
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK 311 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s 311 (845)
.+++|+|++. +|++|+.|+.|++||...
T Consensus 198 -----------------------~~l~~sp~g~-----------------------------~l~s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 198 -----------------------WSLAFDPSGQ-----------------------------RLASCSDDRTVRIWRQYL 225 (345)
T ss_dssp -----------------------EEEEECTTSS-----------------------------EEEEEETTSCEEEEEEEC
T ss_pred -----------------------EEEEECCCCC-----------------------------EEEEEeCCCeEEEecccc
Confidence 5555555555 999999999999999622
Q ss_pred ---------------CeEEEEecC-CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCce---------EEEecCCCCC
Q psy467 312 ---------------FSLVSTTEK-NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ---------YDAQPMGWGK 365 (845)
Q Consensus 312 ---------------~~~l~tl~g-h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~---------l~tl~~h~~~ 365 (845)
++++.++.+ |...|.+++|+|++..|++++.|+ |++|+...+.. .....+|...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~ 305 (345)
T 3fm0_A 226 PGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQD 305 (345)
T ss_dssp TTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSC
T ss_pred CCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCc
Confidence 245566665 888999999999999999999999 99999976531 1234679999
Q ss_pred eEEEEEc-CC-ceEEEE-----EEEEeeCCC
Q psy467 366 VQDLAVT-GT-QLWFRR-----VGTWSHQDS 389 (845)
Q Consensus 366 VtsVafS-dg-~lLaaS-----VsiW~~d~~ 389 (845)
|++++|+ ++ .+|+++ |.+|.....
T Consensus 306 V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 306 VNCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp EEEEEECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred EeEeEEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 9999999 55 466665 999987543
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5e-37 Score=342.52 Aligned_cols=285 Identities=20% Similarity=0.314 Sum_probs=251.0
Q ss_pred eeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
..++|.+|.+.|++++|+| ++++|++|+.||+|+|||..+++....+..|...|.+++|+|++++|++|+.|+.|++||
T Consensus 58 ~~~~l~gH~~~V~~~~~sp-~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~ 136 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTP-EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFN 136 (380)
T ss_dssp EEEEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEE
T ss_pred EeecccccccEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEE
Confidence 4578999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCc-------EEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEE-----cCCCCCeEEEEEec-
Q psy467 87 LAVPT-------VQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTY-----RGHSKSINSIRFSP- 152 (845)
Q Consensus 87 l~tg~-------~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~-----~~h~~~V~sLafSP- 152 (845)
+.+.. ....+.+|.+.|.++.|+|++ ..|++|+.|++|++||+.+++.+..+ .+|...|.+++|++
T Consensus 137 ~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 216 (380)
T 3iz6_a 137 LSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSL 216 (380)
T ss_dssp CCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSS
T ss_pred CCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecC
Confidence 97532 345677899999999999974 57999999999999999999998887 57889999999987
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCC-ccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLV-HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg-~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
++++|++|+.|+.|++ ||++.. .. +..+.+|... |
T Consensus 217 ~~~~l~sgs~D~~v~~-------------wd~~~~~~~--------------------~~~~~~h~~~-------v---- 252 (380)
T 3iz6_a 217 NANMFISGSCDTTVRL-------------WDLRITSRA--------------------VRTYHGHEGD-------I---- 252 (380)
T ss_dssp SCCEEEEEETTSCEEE-------------EETTTTCCC--------------------CEEECCCSSC-------C----
T ss_pred CCCEEEEEECCCeEEE-------------EECCCCCcc--------------------eEEECCcCCC-------e----
Confidence 8899999999999999 999743 33 4555566555 4
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK 311 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s 311 (845)
.+++|+|++. +|++|+.||.|++||+++
T Consensus 253 -----------------------~~v~~~p~~~-----------------------------~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 253 -----------------------NSVKFFPDGQ-----------------------------RFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp -----------------------CEEEECTTSS-----------------------------EEEEECSSSCEEEEETTT
T ss_pred -----------------------EEEEEecCCC-----------------------------eEEEEcCCCeEEEEECCC
Confidence 5566666655 999999999999999999
Q ss_pred CeEEEEecCCC-------CCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe----cCCCCCeEEEEEc-CCceEE
Q psy467 312 FSLVSTTEKNS-------STIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ----PMGWGKVQDLAVT-GTQLWF 378 (845)
Q Consensus 312 ~~~l~tl~gh~-------~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl----~~h~~~VtsVafS-dg~lLa 378 (845)
++++..+..+. ..|++++|+|+|++|++|+.|| |++||+.+++.+..+ .+|.+.|++++|+ +|++|+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~ 360 (380)
T 3iz6_a 281 GHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALC 360 (380)
T ss_dssp TEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEE
T ss_pred CcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEE
Confidence 99998887543 2489999999999999999999 999999999888777 6799999999999 999998
Q ss_pred EE-----EEEEeeCC
Q psy467 379 RR-----VGTWSHQD 388 (845)
Q Consensus 379 aS-----VsiW~~d~ 388 (845)
++ |.+|...+
T Consensus 361 sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 361 TGSWDKNLKIWAFSG 375 (380)
T ss_dssp EECTTSCEEEEECCS
T ss_pred EeeCCCCEEEEecCC
Confidence 88 99998654
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=9.1e-36 Score=327.07 Aligned_cols=285 Identities=21% Similarity=0.349 Sum_probs=237.6
Q ss_pred eeeeeEEeccCCCcEEEEEE-----ecCCCCEEEEEeCCCeEEEEECCC-------CeeEEEecCCCCCeEEEEEcCCCC
Q psy467 4 KVEKAEDFMAHGASVNCLAL-----GKKSGQVLATGGDDKKVNLWALGK-------SNCIMSLSGHSTPVESVQFGNGEE 71 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~Laf-----Sp~dg~~LaTgs~DG~I~IWdl~t-------~~~i~~l~~h~~~V~sLafSpdg~ 71 (845)
.+.....|.+|.+.|++++| ++.++++|++|+.|++|++||+.+ +.....+.+|...|.+++|+|++.
T Consensus 10 ~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~ 89 (343)
T 2xzm_R 10 QVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC 89 (343)
T ss_dssp EEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred EeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence 44567789999999999999 655889999999999999999864 345678899999999999999999
Q ss_pred EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc---CCCCCeEEE
Q psy467 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR---GHSKSINSI 148 (845)
Q Consensus 72 ~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~---~h~~~V~sL 148 (845)
+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.. ....... .|...|.++
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCV 168 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeee
Confidence 999999999999999999999999999999999999999999999999999999999974 4444433 688899999
Q ss_pred EEecCC----------CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCC
Q psy467 149 RFSPDG----------QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRP 218 (845)
Q Consensus 149 afSPdg----------~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~ 218 (845)
+|+|++ .+|++++.||.|++ ||.. ... ...+.+|..
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i-------------wd~~-~~~--------------------~~~~~~h~~ 214 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKV-------------WNTN-FQI--------------------RYTFKAHES 214 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEE-------------EETT-TEE--------------------EEEEECCSS
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEE-------------EcCC-Cce--------------------eEEEcCccc
Confidence 999987 78999999999999 9942 333 445555655
Q ss_pred CCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEE
Q psy467 219 GGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS 298 (845)
Q Consensus 219 ~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg 298 (845)
. | .+++|+|++. +|++|
T Consensus 215 ~-------v---------------------------~~~~~s~~g~-----------------------------~l~sg 231 (343)
T 2xzm_R 215 N-------V---------------------------NHLSISPNGK-----------------------------YIATG 231 (343)
T ss_dssp C-------E---------------------------EEEEECTTSS-----------------------------EEEEE
T ss_pred c-------c---------------------------eEEEECCCCC-----------------------------EEEEE
Confidence 5 5 5566666665 99999
Q ss_pred eCCCeEEEEECCC-CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEE--Eec-----------CCCC
Q psy467 299 SADRTVNFWDLEK-FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYD--AQP-----------MGWG 364 (845)
Q Consensus 299 s~DG~I~IWDl~s-~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~--tl~-----------~h~~ 364 (845)
+.||.|++||+.. ......+. +...|.+++|+|++++|+++++++|++|++.+++... .+. +|..
T Consensus 232 s~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (343)
T 2xzm_R 232 GKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNP 310 (343)
T ss_dssp ETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCC
T ss_pred cCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCC
Confidence 9999999999943 44444443 4567999999999999987766569999998876543 443 6788
Q ss_pred CeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 365 KVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 365 ~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
.|++++|+ +|++|+++ |.+|..+
T Consensus 311 ~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 311 QCTSLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp CEEEEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred ceEEEEECCCCCeEEEecCCceEEEEEEE
Confidence 89999999 88888887 9999753
No 12
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.8e-36 Score=326.45 Aligned_cols=253 Identities=23% Similarity=0.406 Sum_probs=235.6
Q ss_pred cceeeee--------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEE
Q psy467 2 RAKVEKA--------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73 (845)
Q Consensus 2 ~irlw~l--------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~L 73 (845)
++++|++ ..+.+|...|.+++|++ ++.++++++.|++|++||+.+++.+..+..|...+.+++|+|++++|
T Consensus 59 ~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~-~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l 137 (321)
T 3ow8_A 59 LVKVWKWRDERLDLQWSLEGHQLGVVSVDISH-TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL 137 (321)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEE
T ss_pred CEEEEECCCCCeeeeeeeccCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEE
Confidence 4688874 35889999999999999 89999999999999999999999999999999999999999999999
Q ss_pred EEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecC
Q psy467 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153 (845)
Q Consensus 74 aSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPd 153 (845)
++|+.+|.|++|++++++....+..|...|.+++|+|++++|++|+.||.|++||+++++.+..+.+|...|.+++|+|+
T Consensus 138 ~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd 217 (321)
T 3ow8_A 138 ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD 217 (321)
T ss_dssp EEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTT
T ss_pred EEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCC
Confidence 99999999999999999999999989999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccc
Q psy467 154 GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEEN 233 (845)
Q Consensus 154 g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~ 233 (845)
+++|++++.|+.|++ ||++++.. +..+.+|... |
T Consensus 218 ~~~l~s~s~dg~i~i-------------wd~~~~~~--------------------~~~~~~h~~~-------v------ 251 (321)
T 3ow8_A 218 SQLLVTASDDGYIKI-------------YDVQHANL--------------------AGTLSGHASW-------V------ 251 (321)
T ss_dssp SCEEEEECTTSCEEE-------------EETTTCCE--------------------EEEECCCSSC-------E------
T ss_pred CCEEEEEcCCCeEEE-------------EECCCcce--------------------eEEEcCCCCc-------e------
Confidence 999999999999999 99988776 6666666666 5
Q ss_pred ccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe
Q psy467 234 AESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS 313 (845)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~ 313 (845)
.+++|+|++. +|++++.|+.|++||+.+++
T Consensus 252 ---------------------~~~~~sp~~~-----------------------------~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 252 ---------------------LNVAFCPDDT-----------------------------HFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp ---------------------EEEEECTTSS-----------------------------EEEEEETTSCEEEEETTTTE
T ss_pred ---------------------EEEEECCCCC-----------------------------EEEEEeCCCcEEEEeCCCCE
Confidence 6666666666 99999999999999999999
Q ss_pred EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 314 LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 314 ~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
++.++.+|...|.+++|+|+|++|++++.|+ |+|||..
T Consensus 282 ~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 282 CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999999999999 9999963
No 13
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.3e-36 Score=354.48 Aligned_cols=346 Identities=14% Similarity=0.186 Sum_probs=272.5
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-------CCCCCeEEEEEcC
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-------GHSTPVESVQFGN 68 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-------~h~~~V~sLafSp 68 (845)
++++|+ ++.+.+|.+.|++++|+| +|++||+|+.|++|++||+.+++.+..+. +|...|.+++|+|
T Consensus 171 ~v~lwd~~~~~~~~~l~~H~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp 249 (611)
T 1nr0_A 171 TVAIFEGPPFKFKSTFGEHTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP 249 (611)
T ss_dssp CEEEEETTTBEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT
T ss_pred eEEEEECCCCeEeeeeccccCceEEEEECC-CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC
Confidence 467776 467899999999999999 99999999999999999999999988884 7999999999999
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEE-------------------------------------------EEcCCCCCeEE
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPTVQR-------------------------------------------TLNGHKSSITS 105 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~~v~-------------------------------------------~l~~h~~~V~~ 105 (845)
++++|++++.|++|++||+.+++.+. .+.+|...|.+
T Consensus 250 dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~ 329 (611)
T 1nr0_A 250 DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITA 329 (611)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEE
Confidence 99999999999999999999876544 33578899999
Q ss_pred EEEccCCCEEEEEECCCeEEEEECCCCceEEEE-cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEEC
Q psy467 106 VDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDL 184 (845)
Q Consensus 106 lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~-~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl 184 (845)
++|+|++++|++++.|+.|++||+.++.+...+ ..|...|.+++|++++ .+++++.|+.+++ |++
T Consensus 330 l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~-------------w~~ 395 (611)
T 1nr0_A 330 LSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG-DLFTVSWDDHLKV-------------VPA 395 (611)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS-CEEEEETTTEEEE-------------ECS
T ss_pred EEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCC-cEEEEEcCCceEE-------------eec
Confidence 999999999999999999999999998887665 5688999999999765 6889999999999 988
Q ss_pred CCCccCCCC-----CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEE
Q psy467 185 SLVHPLGTP-----PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIF 259 (845)
Q Consensus 185 ~tg~~l~~~-----~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~f 259 (845)
..+...... .......+++++++..+..... ..+.++.... . ..........+++|
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~-------~~v~~~~~~~---~---------~~~~~~~~v~~va~ 456 (611)
T 1nr0_A 396 GGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACY-------KHIAIYSHGK---L---------TEVPISYNSSCVAL 456 (611)
T ss_dssp SSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEES-------SEEEEEETTE---E---------EEEECSSCEEEEEE
T ss_pred CCccccccceeeeecCCCCcEEEEeCCCcEEEEEeC-------ceEEEEeCCc---e---------eeeecCCCceEEEE
Confidence 765542211 1234456778888865544321 1122322100 0 00001122367788
Q ss_pred cCCCCcCCC--------------C-----cccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC-CeEEEE--
Q psy467 260 QPHRSLNRS--------------G-----TCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK-FSLVST-- 317 (845)
Q Consensus 260 spdg~~~~~--------------~-----~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s-~~~l~t-- 317 (845)
+|++..... + ....+...|++++|+|||+ +|++++.|+.|++||+.+ ++++..
T Consensus 457 spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~-----~las~s~d~~v~~w~~~~~~~~~~~~~ 531 (611)
T 1nr0_A 457 SNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGA-----FLVATDQSRKVIPYSVANNFELAHTNS 531 (611)
T ss_dssp CTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSS-----EEEEEETTSCEEEEEGGGTTEESCCCC
T ss_pred eCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCC-----EEEEEcCCCCEEEEEcCCCCceeeeee
Confidence 888764311 1 1123567799999999999 999999999999999987 666544
Q ss_pred ecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc-eE-EEecCC-CCCeEEEEEc-CCceEEEE----EEEEee
Q psy467 318 TEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR-QY-DAQPMG-WGKVQDLAVT-GTQLWFRR----VGTWSH 386 (845)
Q Consensus 318 l~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk-~l-~tl~~h-~~~VtsVafS-dg~lLaaS----VsiW~~ 386 (845)
+.+|...|++++|+|||++||+|+.|+ |+||+++++. .+ ..+.+| ...|++++|+ +++++.++ |.+|.+
T Consensus 532 ~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 532 WTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 609 (611)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTEEEEEETTSCEEEEEC
T ss_pred eeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCEEEEecCCCCEEEEec
Confidence 334999999999999999999999999 9999999875 33 667789 8999999999 88833444 999975
No 14
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.8e-35 Score=329.89 Aligned_cols=285 Identities=24% Similarity=0.397 Sum_probs=241.4
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCC------------------CeEEEEEcCCCCE
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHST------------------PVESVQFGNGEET 72 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~------------------~V~sLafSpdg~~ 72 (845)
..+|.+.|.|++|+| +|++||+|+ ++.+++|++.+++.+..+..|.. .|.+++|+|++++
T Consensus 60 ~~~h~~~V~~v~fsp-dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 137 (393)
T 1erj_A 60 SLDHTSVVCCVKFSN-DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 137 (393)
T ss_dssp EEECSSCCCEEEECT-TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred ecCCCCEEEEEEECC-CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCE
Confidence 347999999999999 999999986 67999999999998888876542 3999999999999
Q ss_pred EEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec
Q psy467 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 73 LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP 152 (845)
|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++++...+. +...+.+++|+|
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~ 216 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSP 216 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECS
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999888776 566799999999
Q ss_pred -CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 153 -DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 153 -dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
++++|++++.|+.|++ ||++++.. +..+......
T Consensus 217 ~~~~~l~~~s~d~~v~i-------------wd~~~~~~--------------------~~~~~~~~~~------------ 251 (393)
T 1erj_A 217 GDGKYIAAGSLDRAVRV-------------WDSETGFL--------------------VERLDSENES------------ 251 (393)
T ss_dssp TTCCEEEEEETTSCEEE-------------EETTTCCE--------------------EEEEC-----------------
T ss_pred CCCCEEEEEcCCCcEEE-------------EECCCCcE--------------------EEeecccccC------------
Confidence 8999999999999999 99988776 3332110000
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK 311 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s 311 (845)
...+...|.+++|+|+++ +|++|+.|+.|++||+.+
T Consensus 252 ---------------------------------------~~~h~~~v~~v~~~~~g~-----~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 252 ---------------------------------------GTGHKDSVYSVVFTRDGQ-----SVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp ----------------------------------------CCCSSCEEEEEECTTSS-----EEEEEETTSEEEEEEC--
T ss_pred ---------------------------------------CCCCCCCEEEEEECCCCC-----EEEEEeCCCEEEEEECCC
Confidence 001223456666666666 999999999999999975
Q ss_pred ------------CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEcC-----
Q psy467 312 ------------FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVTG----- 373 (845)
Q Consensus 312 ------------~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafSd----- 373 (845)
+.+...+.+|...|.+++|+|++++|++|+.|+ |++||+.+++.+..+.+|.+.|.+++|++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~ 367 (393)
T 1erj_A 288 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLG 367 (393)
T ss_dssp -------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTC
T ss_pred CCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcC
Confidence 345667889999999999999999999999999 99999999999999999999999999983
Q ss_pred --CceEEEE-----EEEEeeC
Q psy467 374 --TQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 374 --g~lLaaS-----VsiW~~d 387 (845)
+.+|+++ |.+|...
T Consensus 368 p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 368 PEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp TTCEEEEEEETTSEEEEEEEE
T ss_pred CCCCEEEEECCCCcEEECccc
Confidence 5667766 9999764
No 15
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.7e-35 Score=343.22 Aligned_cols=319 Identities=28% Similarity=0.419 Sum_probs=270.4
Q ss_pred ceeee-----eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE
Q psy467 3 AKVEK-----AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77 (845)
Q Consensus 3 irlw~-----l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs 77 (845)
+++|+ ++.+.+|...|++++|+| ++++|++++.|+.|++|+. +++.+..+.+|...|.+++|+|++++|++++
T Consensus 245 i~~w~~~~~~~~~~~~~~~~v~~v~~~~-d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~ 322 (577)
T 2ymu_A 245 VKLWNRNGQLLQTLTGHSSSVNGVAFRP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASAS 322 (577)
T ss_dssp EEEECTTSCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEe
Confidence 56675 568899999999999999 9999999999999999996 5677888999999999999999999999999
Q ss_pred CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEE
Q psy467 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWI 157 (845)
Q Consensus 78 ~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~L 157 (845)
.|+.|++||... ..+..+.+|...|.+++|+|++++|++++.||.|++||. +++.+..+..|...|.+++|+|++++|
T Consensus 323 ~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l 400 (577)
T 2ymu_A 323 DDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTI 400 (577)
T ss_dssp TTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred CCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEE
Confidence 999999999864 556778889999999999999999999999999999995 578888999999999999999999999
Q ss_pred EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCC--CCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccc
Q psy467 158 ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT--PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAE 235 (845)
Q Consensus 158 asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~--~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~ 235 (845)
++++.|+.|++ ||.. ++.+.. .+...+..++|+|+++.+...... ..+.+|+
T Consensus 401 ~~~~~d~~v~~-------------~~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d------~~v~~w~------ 454 (577)
T 2ymu_A 401 ASASDDKTVKL-------------WNRN-GQLLQTLTGHSSSVWGVAFSPDDQTIASASDD------KTVKLWN------ 454 (577)
T ss_dssp EEEETTSEEEE-------------ECTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETT------SEEEEEE------
T ss_pred EEEeCCCEEEE-------------EeCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEcCC------CEEEEEE------
Confidence 99999999999 8854 333222 235667788999999877653221 1222322
Q ss_pred ccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE
Q psy467 236 SEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV 315 (845)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l 315 (845)
.++.. ......+...|++++|+||++ +|++++.|+.|++||. +++++
T Consensus 455 -------------------------~~~~~--~~~~~~~~~~v~~~~~spd~~-----~las~~~d~~i~iw~~-~~~~~ 501 (577)
T 2ymu_A 455 -------------------------RNGQL--LQTLTGHSSSVRGVAFSPDGQ-----TIASASDDKTVKLWNR-NGQLL 501 (577)
T ss_dssp -------------------------TTSCE--EEEEECCSSCEEEEEECTTSC-----EEEEEETTSEEEEEET-TSCEE
T ss_pred -------------------------CCCCE--EEEEcCCCCCEEEEEEcCCCC-----EEEEEeCCCEEEEEcC-CCCEE
Confidence 11110 001122346789999999999 9999999999999995 67889
Q ss_pred EEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEe
Q psy467 316 STTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWS 385 (845)
Q Consensus 316 ~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~ 385 (845)
..+.+|...|++++|+|+|++||+++.|+ |+|||. +++++..+.+|.+.|++++|+ ||++|+++ |.+|.
T Consensus 502 ~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 502 QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999999999999999999999999999 999995 678999999999999999999 89888876 88884
No 16
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=332.88 Aligned_cols=290 Identities=18% Similarity=0.202 Sum_probs=227.1
Q ss_pred eeeeeE--EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC-----------CeeEEEecCCCCCeEEEEEcCCC
Q psy467 4 KVEKAE--DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK-----------SNCIMSLSGHSTPVESVQFGNGE 70 (845)
Q Consensus 4 rlw~l~--~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t-----------~~~i~~l~~h~~~V~sLafSpdg 70 (845)
|.|.+. ....|...|.+++|+| +|++|++++ |+++++||... .........|...|.+++|+|++
T Consensus 17 r~w~~~~~~~~~~~~~v~~~~fs~-dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~ 94 (344)
T 4gqb_B 17 REWNLPPNAPACMERQLEAARYRS-DGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER 94 (344)
T ss_dssp ------CCSCSSCCSEEEEEEECT-TSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT
T ss_pred cccCCCCCCcccccCCEEEEEECC-CCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC
Confidence 455543 2456888999999999 999999887 66788886310 01111122356789999999985
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEE----EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeE
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQRT----LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v~~----l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~ 146 (845)
.|++|+.||+|+|||+.+++.+.. ..+|...|++++|+|++++|++|+.||+|++||+++++++..+.+|...|.
T Consensus 95 -~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~ 173 (344)
T 4gqb_B 95 -GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVT 173 (344)
T ss_dssp -EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred -eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceE
Confidence 788999999999999998865433 457999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCC-CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 147 SIRFSPDG-QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 147 sLafSPdg-~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
+++|++++ .+|++++.|+.|++ ||+++++. +..+..+...
T Consensus 174 ~~~~~~~~~~~l~s~s~D~~v~i-------------wd~~~~~~--------------------~~~~~~~~~~------ 214 (344)
T 4gqb_B 174 CVAASPHKDSVFLSCSEDNRILL-------------WDTRCPKP--------------------ASQIGCSAPG------ 214 (344)
T ss_dssp EEEECSSCTTEEEEEETTSCEEE-------------EETTSSSC--------------------EEECC----C------
T ss_pred EEEecCCCCCceeeecccccccc-------------ccccccce--------------------eeeeecceee------
Confidence 99999987 47899999999999 99998877 3333211111
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
..+.+++|+|++.. +|++|+.||.|+
T Consensus 215 --------------------------------------------------~~~~~~~~~p~~~~----~l~sg~~dg~v~ 240 (344)
T 4gqb_B 215 --------------------------------------------------YLPTSLAWHPQQSE----VFVFGDENGTVS 240 (344)
T ss_dssp --------------------------------------------------CCEEEEEECSSCTT----EEEEEETTSEEE
T ss_pred --------------------------------------------------ccceeeeecCCCCc----ceEEeccCCcEE
Confidence 11234444443221 899999999999
Q ss_pred EEECCCCeEEEEecCCCCCEEEEEEeCCC-CEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCce-EEEE-
Q psy467 306 FWDLEKFSLVSTTEKNSSTIRRLTFSEGG-ECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQL-WFRR- 380 (845)
Q Consensus 306 IWDl~s~~~l~tl~gh~~~VtslafSpdG-~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~l-LaaS- 380 (845)
+||+++++++.++.+|...|++++|+|+| ++||+|+.|+ |+|||+.+++++ .+.+|.+.|++++|+ +++. ++++
T Consensus 241 ~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s 319 (344)
T 4gqb_B 241 LVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVG 319 (344)
T ss_dssp EEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEc
Confidence 99999999999999999999999999998 5899999999 999999998765 568899999999999 7764 4443
Q ss_pred ----EEEEeeCCCC
Q psy467 381 ----VGTWSHQDSG 390 (845)
Q Consensus 381 ----VsiW~~d~~~ 390 (845)
|.+|.++.++
T Consensus 320 ~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 320 WDHQVVHHVVPTEP 333 (344)
T ss_dssp TTSCEEEEECCC--
T ss_pred CCCeEEEEECCCCC
Confidence 9999876543
No 17
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-35 Score=318.70 Aligned_cols=286 Identities=19% Similarity=0.278 Sum_probs=231.5
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC--eeEEEe-cC-CCCCeEEEEEcCCCCEEEEEECCCc
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS--NCIMSL-SG-HSTPVESVQFGNGEETLSAGCQSGS 81 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~--~~i~~l-~~-h~~~V~sLafSpdg~~LaSgs~DGt 81 (845)
..+++|.+|.+.|++++|++ + +||+|+.|++|++|++..+ .....+ .+ |...|.+++|+|++++|++|+.|++
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~-~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~ 81 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQ-G--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDST 81 (330)
T ss_dssp EEEEEEECCSSCEEEEEEET-T--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred ccceeeccCCCceeeeccCC-C--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCc
Confidence 45788999999999999998 4 9999999999999999764 455556 44 9999999999999999999999999
Q ss_pred EEEEECCC-------CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC----CceEEEEcCCCCCeEEEEE
Q psy467 82 IKIWNLAV-------PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR----KGCIYTYRGHSKSINSIRF 150 (845)
Q Consensus 82 V~VWDl~t-------g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t----~~~l~~~~~h~~~V~sLaf 150 (845)
|++||+.. .+.+..+.+|...|.+++|+|++++|++|+.|++|++||++. .+++..+.+|...|.+++|
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 99999853 356778899999999999999999999999999999999943 2567788899999999999
Q ss_pred ecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeee
Q psy467 151 SPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRI 230 (845)
Q Consensus 151 SPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i 230 (845)
+|++++|++++.|+.|++ ||..++.. ..+..+.+|... |
T Consensus 162 ~p~~~~l~s~s~D~~i~i-------------W~~~~~~~------------------~~~~~~~~h~~~-------v--- 200 (330)
T 2hes_X 162 HPSEALLASSSYDDTVRI-------------WKDYDDDW------------------ECVAVLNGHEGT-------V--- 200 (330)
T ss_dssp CSSSSEEEEEETTSCEEE-------------EEEETTEE------------------EEEEEECCCSSC-------E---
T ss_pred CCCCCEEEEEcCCCeEEE-------------EECCCCCe------------------eEEEEccCCCCc-------E---
Confidence 999999999999999999 99765421 115566666666 5
Q ss_pred cccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC
Q psy467 231 EENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE 310 (845)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~ 310 (845)
.++.|+|++. +. +|++|+.|+.|++||+.
T Consensus 201 ------------------------~~~~~~~~~~----------------------~~-----~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 201 ------------------------WSSDFDKTEG----------------------VF-----RLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp ------------------------EEEEECCSSS----------------------SC-----EEEEEETTSCEEEEEEE
T ss_pred ------------------------EEEEecCCCC----------------------ee-----EEEEEeCCCeEEEEEec
Confidence 6666666621 22 89999999999999987
Q ss_pred CC--------eEEEEecC-CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc--eEEE-ecCCCC-CeEEEEEc---C
Q psy467 311 KF--------SLVSTTEK-NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR--QYDA-QPMGWG-KVQDLAVT---G 373 (845)
Q Consensus 311 s~--------~~l~tl~g-h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk--~l~t-l~~h~~-~VtsVafS---d 373 (845)
.+ .+...+.+ |...|.+++|++++ +|++++.|+ |+||+..+++ .+.. +.+|.. .|++++|+ +
T Consensus 230 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~ 308 (330)
T 2hes_X 230 GDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNG 308 (330)
T ss_dssp EECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC----
T ss_pred CCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCC
Confidence 54 45566665 89999999999765 889999999 9999998874 3333 367877 89999999 3
Q ss_pred CceEEEE-----EEEEeeC
Q psy467 374 TQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 374 g~lLaaS-----VsiW~~d 387 (845)
+++|+++ |.+|..+
T Consensus 309 ~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 309 KTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp -CCEEEEETTSEEEEEEC-
T ss_pred ceEEEEecCCCcEEEEEec
Confidence 6777766 9999764
No 18
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-35 Score=335.44 Aligned_cols=252 Identities=22% Similarity=0.423 Sum_probs=235.6
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
++++|+ .+.+.+|.+.|.+++|+| ++++|++|+.|++|++||+.+++++..+.+|...|.+++|+|++++|++
T Consensus 131 ~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s 209 (410)
T 1vyh_C 131 TIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVS 209 (410)
T ss_dssp CEEEEETTTCCCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEE
T ss_pred eEEEEECCCCcEEEEEeccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEE
Confidence 467887 468999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred EECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecC--
Q psy467 76 GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD-- 153 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPd-- 153 (845)
|+.|++|++||+.++.++..+.+|...|.+++|+|++.+|++|+.|+.|++||+.++++...+..|...|.+++|+|+
T Consensus 210 ~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 289 (410)
T 1vyh_C 210 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESS 289 (410)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCG
T ss_pred EeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred ------------------CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEec
Q psy467 154 ------------------GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTK 215 (845)
Q Consensus 154 ------------------g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~ 215 (845)
+.+|++|+.|+.|++ ||++++.. +..+.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~i-------------wd~~~~~~--------------------~~~~~~ 336 (410)
T 1vyh_C 290 YSSISEATGSETKKSGKPGPFLLSGSRDKTIKM-------------WDVSTGMC--------------------LMTLVG 336 (410)
T ss_dssp GGGGGGCCSCC-------CCEEEEEETTSEEEE-------------EETTTTEE--------------------EEEEEC
T ss_pred ccchhhhccccccccCCCCCEEEEEeCCCeEEE-------------EECCCCce--------------------EEEEEC
Confidence 678999999999999 99998887 777777
Q ss_pred CCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE
Q psy467 216 GRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT 295 (845)
Q Consensus 216 h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL 295 (845)
|... | .+++|+|++. +|
T Consensus 337 h~~~-------v---------------------------~~v~~~~~g~-----------------------------~l 353 (410)
T 1vyh_C 337 HDNW-------V---------------------------RGVLFHSGGK-----------------------------FI 353 (410)
T ss_dssp CSSC-------E---------------------------EEEEECSSSS-----------------------------CE
T ss_pred CCCc-------E---------------------------EEEEEcCCCC-----------------------------EE
Confidence 7666 5 6666777666 89
Q ss_pred EEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 296 TSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 296 atgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
++|+.|+.|++||+.+++++.++.+|...|++++|+|++.+|++|+.|+ |+||++
T Consensus 354 ~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 354 LSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 9999999999999999999999999999999999999999999999999 999986
No 19
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.6e-36 Score=330.09 Aligned_cols=288 Identities=15% Similarity=0.185 Sum_probs=226.9
Q ss_pred eeeee--EEeccCCCcEEEEEEecCCCCEEEEEeC------CCeEEEEECCCCeeE----EEecCCCCCeEEEEEcCCCC
Q psy467 4 KVEKA--EDFMAHGASVNCLALGKKSGQVLATGGD------DKKVNLWALGKSNCI----MSLSGHSTPVESVQFGNGEE 71 (845)
Q Consensus 4 rlw~l--~~L~gH~~~V~~LafSp~dg~~LaTgs~------DG~I~IWdl~t~~~i----~~l~~h~~~V~sLafSpdg~ 71 (845)
+.|.+ ....+|.+.|++++||| +|++||+|+. |+.|++|+..++... ....+|...|.+++|+|++.
T Consensus 29 ~~w~~p~~~p~~H~~~V~~v~fSp-DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~ 107 (357)
T 4g56_B 29 SAWGRPVTAPACMEVQIGAVRYRR-DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG 107 (357)
T ss_dssp -----------CCCSEEEEEEECS-SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE
T ss_pred cccCCCCCCcccccCCEEEEEECC-CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC
Confidence 45554 34567999999999999 9999999997 788999998766532 33456889999999999975
Q ss_pred EEEEEECCCcEEEEECCCCcEEE----EEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEE
Q psy467 72 TLSAGCQSGSIKIWNLAVPTVQR----TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147 (845)
Q Consensus 72 ~LaSgs~DGtV~VWDl~tg~~v~----~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~s 147 (845)
+++++.||+|+|||+.+++... ...+|...|.+++|+|++++|++|+.||.|++||+++++++..+.+|...|.+
T Consensus 108 -~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~ 186 (357)
T 4g56_B 108 -ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNC 186 (357)
T ss_dssp -EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred -EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEE
Confidence 5567789999999999876543 34579999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCC-EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceee
Q psy467 148 IRFSPDGQ-WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKID 226 (845)
Q Consensus 148 LafSPdg~-~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~ 226 (845)
++|++++. ++++++.||.|++ ||+++++.. ..+..+.
T Consensus 187 v~~s~~~~~~~~s~~~dg~v~~-------------wd~~~~~~~--------------------~~~~~~~--------- 224 (357)
T 4g56_B 187 VAACPGKDTIFLSCGEDGRILL-------------WDTRKPKPA--------------------TRIDFCA--------- 224 (357)
T ss_dssp EEECTTCSSCEEEEETTSCEEE-------------CCTTSSSCB--------------------CBCCCTT---------
T ss_pred EEEccCCCceeeeeccCCceEE-------------EECCCCcee--------------------eeeeecc---------
Confidence 99999875 7899999999999 999887762 1111100
Q ss_pred EeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEE
Q psy467 227 VTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNF 306 (845)
Q Consensus 227 V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~I 306 (845)
....+++++|+|++.. +|++|+.|+.|++
T Consensus 225 -----------------------------------------------~~~~v~~v~~sp~~~~----~la~g~~d~~i~~ 253 (357)
T 4g56_B 225 -----------------------------------------------SDTIPTSVTWHPEKDD----TFACGDETGNVSL 253 (357)
T ss_dssp -----------------------------------------------CCSCEEEEEECTTSTT----EEEEEESSSCEEE
T ss_pred -----------------------------------------------ccccccchhhhhcccc----eEEEeecccceeE
Confidence 0112344445544321 8999999999999
Q ss_pred EECCCCeEEEEecCCCCCEEEEEEeCCC-CEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc--CCceEEEE--
Q psy467 307 WDLEKFSLVSTTEKNSSTIRRLTFSEGG-ECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT--GTQLWFRR-- 380 (845)
Q Consensus 307 WDl~s~~~l~tl~gh~~~VtslafSpdG-~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS--dg~lLaaS-- 380 (845)
||+++++++.++.+|...|++++|+|++ ++||+|+.|+ |+|||+++++++..+ +|.+.|++++|+ ++++|+++
T Consensus 254 wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~ 332 (357)
T 4g56_B 254 VNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGW 332 (357)
T ss_dssp EESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEET
T ss_pred EECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcC
Confidence 9999999999999999999999999987 6899999999 999999999887665 799999999999 67877766
Q ss_pred ---EEEEeeC
Q psy467 381 ---VGTWSHQ 387 (845)
Q Consensus 381 ---VsiW~~d 387 (845)
|.+|.+.
T Consensus 333 Dg~v~iW~~~ 342 (357)
T 4g56_B 333 DHKVLHHHLP 342 (357)
T ss_dssp TSCEEEEECC
T ss_pred CCeEEEEECC
Confidence 9999864
No 20
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-34 Score=310.51 Aligned_cols=286 Identities=17% Similarity=0.261 Sum_probs=253.7
Q ss_pred eeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
...+...|.+|.+.|++++|+| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|+
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNK-EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIK 99 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECT-TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEE
T ss_pred cccccEEEEEeeceEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 3456678999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC-----CeEEEEECCCCc-----------eEEEEcCCCC--Ce
Q psy467 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD-----SFIKLWDLRRKG-----------CIYTYRGHSK--SI 145 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D-----G~I~IWDl~t~~-----------~l~~~~~h~~--~V 145 (845)
+||+.+++.+..+. +...|.+++|+|++++|++++.+ |.|.+||+.... .+..+..|.. .+
T Consensus 100 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 100 LWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp EEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred EEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 99999999999888 88899999999999999999999 999999997553 3344455555 89
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCC-CccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 146 NSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSL-VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~t-g~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
.+++|+|++++|++++.||.|++ ||+.+ +.. +..+..|...
T Consensus 179 ~~~~~~~~~~~l~~~~~dg~i~i-------------~d~~~~~~~--------------------~~~~~~~~~~----- 220 (369)
T 3zwl_B 179 TVAGWSTKGKYIIAGHKDGKISK-------------YDVSNNYEY--------------------VDSIDLHEKS----- 220 (369)
T ss_dssp EEEEECGGGCEEEEEETTSEEEE-------------EETTTTTEE--------------------EEEEECCSSC-----
T ss_pred eEEEEcCCCCEEEEEcCCCEEEE-------------EECCCCcEe--------------------EEEEecCCCc-----
Confidence 99999999999999999999999 99987 444 5555555544
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
+ ..++|+|++. +|++++.|+.|
T Consensus 221 --v---------------------------~~~~~~~~~~-----------------------------~l~~~~~d~~i 242 (369)
T 3zwl_B 221 --I---------------------------SDMQFSPDLT-----------------------------YFITSSRDTNS 242 (369)
T ss_dssp --E---------------------------EEEEECTTSS-----------------------------EEEEEETTSEE
T ss_pred --e---------------------------eEEEECCCCC-----------------------------EEEEecCCceE
Confidence 4 5556666555 99999999999
Q ss_pred EEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC---------------EEEEEecCCceEEEecCCCCCeEEE
Q psy467 305 NFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG---------------LKVYGWEPARQYDAQPMGWGKVQDL 369 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG---------------I~IWDl~tgk~l~tl~~h~~~VtsV 369 (845)
++||+.+++.+..+. +...+.+++|+|+++++++++.++ +++||+.+++.+..+.+|...|+++
T Consensus 243 ~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~ 321 (369)
T 3zwl_B 243 FLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTV 321 (369)
T ss_dssp EEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEE
Confidence 999999999998888 678899999999999999998764 8999999999999999999999999
Q ss_pred EEc-CCceEEEE-----EEEEeeCC
Q psy467 370 AVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 370 afS-dg~lLaaS-----VsiW~~d~ 388 (845)
+|+ ++++|+++ |.+|.++.
T Consensus 322 ~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 322 AISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp EECTTSSEEEEEETTSEEEEEEECH
T ss_pred EECCCCCEEEEEcCCCeEEEEECcc
Confidence 999 88888887 99998754
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.8e-34 Score=332.69 Aligned_cols=328 Identities=27% Similarity=0.419 Sum_probs=275.3
Q ss_pred ceeee-----eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE
Q psy467 3 AKVEK-----AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77 (845)
Q Consensus 3 irlw~-----l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs 77 (845)
+++|+ ++.+.+|.+.|.+++|+| ++.+|++++.|+.|++|+. +++.+..+.+|...|.+++|+|+++.|++++
T Consensus 204 v~~w~~~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~ 281 (577)
T 2ymu_A 204 VKLWNRNGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASAS 281 (577)
T ss_dssp EEEECTTSCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEeCCCcEEEEEecCCCCEEEEEECC-CCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEe
Confidence 45664 578899999999999999 9999999999999999996 5678888999999999999999999999999
Q ss_pred CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEE
Q psy467 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWI 157 (845)
Q Consensus 78 ~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~L 157 (845)
.|+.|++||.. ++.+..+.+|...|.+++|+|++++|++++.|+.|++||+. +..+..+..|...+.+++|+|++++|
T Consensus 282 ~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l 359 (577)
T 2ymu_A 282 DDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTI 359 (577)
T ss_dssp TTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEE
Confidence 99999999975 67788899999999999999999999999999999999986 45667788899999999999999999
Q ss_pred EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC--CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccc
Q psy467 158 ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP--PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAE 235 (845)
Q Consensus 158 asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~--~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~ 235 (845)
++++.|+.+++ ||.. ++.+..+ +...+.+++|+|+++.+..... +..+.+|+
T Consensus 360 ~~~~~dg~v~~-------------~~~~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~------d~~v~~~~------ 413 (577)
T 2ymu_A 360 ASASDDKTVKL-------------WNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASD------DKTVKLWN------ 413 (577)
T ss_dssp EEEETTSEEEE-------------EETT-CCEEEEEECCSSCEEEEEECTTSSCEEEEET------TSEEEEEC------
T ss_pred EEEeCCCEEEE-------------EcCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEeC------CCEEEEEe------
Confidence 99999999999 8854 3333222 3566788999999988765321 11222321
Q ss_pred ccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE
Q psy467 236 SEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV 315 (845)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l 315 (845)
.++.. ......+...|++++|+||++ +|++++.|+.|++||. +++.+
T Consensus 414 -------------------------~~~~~--~~~~~~~~~~v~~~~~s~d~~-----~l~~~~~d~~v~~w~~-~~~~~ 460 (577)
T 2ymu_A 414 -------------------------RNGQL--LQTLTGHSSSVWGVAFSPDDQ-----TIASASDDKTVKLWNR-NGQLL 460 (577)
T ss_dssp -------------------------TTCCE--EEEEECCSSCEEEEEECTTSS-----EEEEEETTSEEEEEET-TSCEE
T ss_pred -------------------------CCCCE--EEEecCCCCCeEEEEECCCCC-----EEEEEcCCCEEEEEEC-CCCEE
Confidence 11110 001122346788999999998 9999999999999996 46788
Q ss_pred EEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCC
Q psy467 316 STTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 316 ~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~ 388 (845)
..+.+|...|++++|+|+|++|++++.|+ |++||. +++++..+.+|...|++++|+ +|++|+++ |.+|..++
T Consensus 461 ~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 461 QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 89999999999999999999999999999 999994 678999999999999999999 99998887 99998666
Q ss_pred CCCccc
Q psy467 389 SGFSTL 394 (845)
Q Consensus 389 ~~~~~~ 394 (845)
+.+..+
T Consensus 540 ~~~~~~ 545 (577)
T 2ymu_A 540 QLLQTL 545 (577)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 554444
No 22
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-34 Score=315.60 Aligned_cols=317 Identities=16% Similarity=0.224 Sum_probs=261.6
Q ss_pred ccCCCcEEEEEEecCCCC-EEEEEeCCCeEEEEEC----CCCe------eEEEecC----------CCCCeEEEEEcCCC
Q psy467 12 MAHGASVNCLALGKKSGQ-VLATGGDDKKVNLWAL----GKSN------CIMSLSG----------HSTPVESVQFGNGE 70 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~-~LaTgs~DG~I~IWdl----~t~~------~i~~l~~----------h~~~V~sLafSpdg 70 (845)
..|.+.|++++|+| +++ +||+|+.||.|++|++ .+++ ....+.. |...|.+++|+|++
T Consensus 42 ~~~~~~v~~~~~s~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 120 (425)
T 1r5m_A 42 IVKLDNIVSSTWNP-LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG 120 (425)
T ss_dssp EEECSCCSEEEECS-SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS
T ss_pred eeccCceEEEEECC-CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC
Confidence 34669999999999 888 9999999999999999 8887 4555554 67899999999999
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCC------
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS------ 144 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~------ 144 (845)
++|++++.||.|++|| .+++.+..+..|...|.+++|+|++++|++++.||.|++||+.+++.+..+..+...
T Consensus 121 ~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 121 NSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINA 199 (425)
T ss_dssp SEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------
T ss_pred CEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceee
Confidence 9999999999999999 668889999999999999999999999999999999999999999999998877776
Q ss_pred ---------eEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC--CCCCCcceeecCCCCeEEEE
Q psy467 145 ---------INSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP--PPQYTSSVPFSHNTSLRKSF 213 (845)
Q Consensus 145 ---------V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~--~~~~i~svs~spdg~~l~~~ 213 (845)
+.+++|++++ .+++++.||.|++ ||+.+++.+... +...+..++|+|+++.+...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~-------------~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFV-------------YQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp ------CCCBSCCEEEETT-EEEEECGGGCEEE-------------EETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred ccccCCcceeeEEEEcCCC-EEEEEcCCCeEEE-------------EEcCCCceeeeeccCCCceEEEEECCCCCEEEEE
Confidence 9999999975 5888999999999 999988765443 35678899999999877654
Q ss_pred ecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccce
Q psy467 214 TKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFI 293 (845)
Q Consensus 214 ~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~ 293 (845)
.. . ..+.+|++.... ....+ ..+...+.+++|+|++
T Consensus 266 ~~-d-----~~i~i~d~~~~~--------------------~~~~~------------~~~~~~i~~~~~~~~~------ 301 (425)
T 1r5m_A 266 SD-D-----GTLRIWHGGNGN--------------------SQNCF------------YGHSQSIVSASWVGDD------ 301 (425)
T ss_dssp ET-T-----SCEEEECSSSBS--------------------CSEEE------------CCCSSCEEEEEEETTT------
T ss_pred cC-C-----CEEEEEECCCCc--------------------cceEe------------cCCCccEEEEEECCCC------
Confidence 31 1 123333322110 00111 1234578899999987
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc------------------
Q psy467 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR------------------ 354 (845)
Q Consensus 294 lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk------------------ 354 (845)
++++++.|+.|++||+.+++++..+..|...|.+++|+|+|++|++++.|+ |++||+.+++
T Consensus 302 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (425)
T 1r5m_A 302 KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLP 381 (425)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEE
T ss_pred EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCccc
Confidence 588999999999999999999999999999999999999999999999999 9999999888
Q ss_pred --eEEEecCCCC--CeEEEEEc-CCceEEEE-----EEEEeeCC
Q psy467 355 --QYDAQPMGWG--KVQDLAVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 355 --~l~tl~~h~~--~VtsVafS-dg~lLaaS-----VsiW~~d~ 388 (845)
.+..+..|.. .|++++|+ ++++|+++ |.+|.+++
T Consensus 382 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 382 IPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp CCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECCC
T ss_pred chhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeecC
Confidence 8899999976 99999999 88888777 89997653
No 23
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.7e-34 Score=312.11 Aligned_cols=252 Identities=23% Similarity=0.393 Sum_probs=224.2
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC----eeEEEecCCCCCeEEEEEcCCCC
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS----NCIMSLSGHSTPVESVQFGNGEE 71 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~----~~i~~l~~h~~~V~sLafSpdg~ 71 (845)
++++|+ +..+..|...|.+++|+| ++++|++|+.|+.|++|++.+. .....+.+|...|.++.|++++.
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 156 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ 156 (340)
T ss_dssp EEEEEETTTCCEEEEEECSSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE
T ss_pred cEEEEECCCCCcceEeecCCccEEEEEECC-CCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc
Confidence 467886 467889999999999999 9999999999999999999765 45677889999999999998764
Q ss_pred EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEe
Q psy467 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151 (845)
Q Consensus 72 ~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafS 151 (845)
+++++.|++|++||+.+++.+..+.+|...|.+++|+|++++|++|+.||.|++||++++.++..+.+|...|.+++|+
T Consensus 157 -l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~ 235 (340)
T 1got_B 157 -IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF 235 (340)
T ss_dssp -EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEEC
T ss_pred -EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEc
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 152 PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 152 Pdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
|++++|++++.||.|++ ||+++++. +..+..+..
T Consensus 236 p~~~~l~s~s~d~~v~i-------------wd~~~~~~--------------------~~~~~~~~~------------- 269 (340)
T 1got_B 236 PNGNAFATGSDDATCRL-------------FDLRADQE--------------------LMTYSHDNI------------- 269 (340)
T ss_dssp TTSSEEEEEETTSCEEE-------------EETTTTEE--------------------EEEECCTTC-------------
T ss_pred CCCCEEEEEcCCCcEEE-------------EECCCCcE--------------------EEEEccCCc-------------
Confidence 99999999999999999 99987765 333221100
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK 311 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s 311 (845)
...|++++|+|+|+ +|++|+.|+.|++||+.+
T Consensus 270 -------------------------------------------~~~v~~~~~s~~g~-----~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 270 -------------------------------------------ICGITSVSFSKSGR-----LLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp -------------------------------------------CSCEEEEEECTTSS-----EEEEEETTSEEEEEETTT
T ss_pred -------------------------------------------ccceEEEEECCCCC-----EEEEECCCCeEEEEEccc
Confidence 11344555555555 999999999999999999
Q ss_pred CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 312 FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 312 ~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
++.+..+.+|.+.|++++|+|+|.+|++|+.|+ |+|||
T Consensus 302 ~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 302 ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999999999999999999 99996
No 24
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.4e-34 Score=317.17 Aligned_cols=282 Identities=17% Similarity=0.192 Sum_probs=246.7
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe------eEEEecCCCCCeEEEEEcCC----C---CE
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN------CIMSLSGHSTPVESVQFGNG----E---ET 72 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~------~i~~l~~h~~~V~sLafSpd----g---~~ 72 (845)
...+.+.+|.+.|++++|+| ++|++|+.||.|++|++.+++ .+..+.+|...|.+++|+|+ + ++
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence 34567899999999999987 799999999999999999887 78888999999999999999 9 99
Q ss_pred EEEEECCCcEEEEECCCCcE-----EEEEcCC-----CCCeEEEEEc----cCCCE-EEEEECCCeEEEEECCC------
Q psy467 73 LSAGCQSGSIKIWNLAVPTV-----QRTLNGH-----KSSITSVDFH----PYGDY-LCSGSLDSFIKLWDLRR------ 131 (845)
Q Consensus 73 LaSgs~DGtV~VWDl~tg~~-----v~~l~~h-----~~~V~~lafs----pdg~~-Lasgs~DG~I~IWDl~t------ 131 (845)
|++++.||.|++||+.+++. ...+..| ...|.+++|+ |++++ |++++.||.|++||+.+
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999999999998886 8888888 5899999999 99999 99999999999999988
Q ss_pred CceEE-----EE-------cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCc
Q psy467 132 KGCIY-----TY-------RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTS 199 (845)
Q Consensus 132 ~~~l~-----~~-------~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~ 199 (845)
++.+. .+ ..|...|.+++|+|++ ++++++.||.|++ ||+++++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i-------------~d~~~~~~---------- 219 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQI-------------SELSTLRP---------- 219 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEE-------------EETTTTEE----------
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEE-------------EECCCCce----------
Confidence 66655 66 4488899999999999 9999999999999 99988776
Q ss_pred ceeecCCCCeEEEEec---C---CCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccc
Q psy467 200 SVPFSHNTSLRKSFTK---G---RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVP 273 (845)
Q Consensus 200 svs~spdg~~l~~~~~---h---~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~ 273 (845)
+..+.. | ... + .+++|+|++.
T Consensus 220 ----------~~~~~~~~~h~~~~~~-------i---------------------------~~i~~~~~~~--------- 246 (397)
T 1sq9_A 220 ----------LYNFESQHSMINNSNS-------I---------------------------RSVKFSPQGS--------- 246 (397)
T ss_dssp ----------EEEEECCC---CCCCC-------E---------------------------EEEEECSSTT---------
T ss_pred ----------eEEEeccccccccCCc-------c---------------------------ceEEECCCCC---------
Confidence 555554 4 333 3 4555555554
Q ss_pred cccCceeEEEcCCCCcccceEEEEEeCC---CeEEEEECCCCeEEEEecC-------------CCCCEEEEEEeCCCCEE
Q psy467 274 VSVSRTSLSILPQSPMLCFILTTSSSAD---RTVNFWDLEKFSLVSTTEK-------------NSSTIRRLTFSEGGECL 337 (845)
Q Consensus 274 ~~~~I~slafSPdg~~~~~~lLatgs~D---G~I~IWDl~s~~~l~tl~g-------------h~~~VtslafSpdG~~L 337 (845)
+|++++.| +.|++||+.+++++..+.+ |...|.+++|+|++++|
T Consensus 247 --------------------~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 306 (397)
T 1sq9_A 247 --------------------LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL 306 (397)
T ss_dssp --------------------EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEE
T ss_pred --------------------EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEE
Confidence 99999999 9999999999999999998 99999999999999999
Q ss_pred EEEeCCC-EEEEEecCCceEEEec------CC---------------CCCeEEEEEc-CC----------ceEEEE----
Q psy467 338 LGGDTEG-LKVYGWEPARQYDAQP------MG---------------WGKVQDLAVT-GT----------QLWFRR---- 380 (845)
Q Consensus 338 asgs~DG-I~IWDl~tgk~l~tl~------~h---------------~~~VtsVafS-dg----------~lLaaS---- 380 (845)
++++.|+ |++||+.+++.+..+. +| ...|++++|+ ++ ++|+++
T Consensus 307 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg 386 (397)
T 1sq9_A 307 CSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDR 386 (397)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTT
T ss_pred EEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCC
Confidence 9999999 9999999999999998 88 8999999999 76 577766
Q ss_pred -EEEEeeC
Q psy467 381 -VGTWSHQ 387 (845)
Q Consensus 381 -VsiW~~d 387 (845)
|.+|.++
T Consensus 387 ~i~iw~~~ 394 (397)
T 1sq9_A 387 SIRWFREA 394 (397)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEcC
Confidence 9999764
No 25
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=7.3e-33 Score=298.91 Aligned_cols=282 Identities=24% Similarity=0.343 Sum_probs=242.7
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC-----eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-----NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSI 82 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~-----~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV 82 (845)
..+|+||.+.|++|+|+|+++++||||+.||+|+|||+.+. .+...+.+|...|.+++|+|++++|++++.|+.|
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 45799999999999999966899999999999999998654 3567889999999999999999999999999999
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceE-EEEcCCCCCeEEEEEecCC--CEEEE
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI-YTYRGHSKSINSIRFSPDG--QWIAS 159 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l-~~~~~h~~~V~sLafSPdg--~~Las 159 (845)
++|+............+...+..+.+++++++|++++.|+.+++||+...... ....+|...+.+++|++++ .++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEE
Confidence 99999999888888888899999999999999999999999999999765443 3456788999999999864 57889
Q ss_pred EeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccc
Q psy467 160 GGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQ 239 (845)
Q Consensus 160 gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~ 239 (845)
++.|+.|++ ||+.+++. +..+.+|... |
T Consensus 191 ~~~d~~i~i-------------~d~~~~~~--------------------~~~~~~h~~~-------v------------ 218 (340)
T 4aow_A 191 CGWDKLVKV-------------WNLANCKL--------------------KTNHIGHTGY-------L------------ 218 (340)
T ss_dssp EETTSCEEE-------------EETTTTEE--------------------EEEECCCSSC-------E------------
T ss_pred EcCCCEEEE-------------EECCCCce--------------------eeEecCCCCc-------E------------
Confidence 999999999 99998877 6666666655 5
Q ss_pred ccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec
Q psy467 240 AGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE 319 (845)
Q Consensus 240 ~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~ 319 (845)
.+++|+|++. +|++|+.||.|++||+.+.+++..+.
T Consensus 219 ---------------~~~~~s~~~~-----------------------------~l~s~s~Dg~i~iwd~~~~~~~~~~~ 254 (340)
T 4aow_A 219 ---------------NTVTVSPDGS-----------------------------LCASGGKDGQAMLWDLNEGKHLYTLD 254 (340)
T ss_dssp ---------------EEEEECTTSS-----------------------------EEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ---------------EEEEECCCCC-----------------------------EEEEEeCCCeEEEEEeccCceeeeec
Confidence 5666666665 99999999999999999999999888
Q ss_pred CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe---------cCCCCCeEEEEEc-CCceEEEE-----EEE
Q psy467 320 KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ---------PMGWGKVQDLAVT-GTQLWFRR-----VGT 383 (845)
Q Consensus 320 gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl---------~~h~~~VtsVafS-dg~lLaaS-----Vsi 383 (845)
.+ ..|.+++|+|++.+++++ .|+ |++||++++..+..+ .+|...|++++|+ +|++|+++ |.+
T Consensus 255 ~~-~~v~~~~~~~~~~~~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~i 332 (340)
T 4aow_A 255 GG-DIINALCFSPNRYWLCAA-TGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 332 (340)
T ss_dssp CS-SCEEEEEECSSSSEEEEE-ETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CC-ceEEeeecCCCCceeecc-CCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 64 679999999998766555 567 999999988766554 3678899999999 99998887 999
Q ss_pred EeeC
Q psy467 384 WSHQ 387 (845)
Q Consensus 384 W~~d 387 (845)
|.+.
T Consensus 333 W~~~ 336 (340)
T 4aow_A 333 WQVT 336 (340)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 9754
No 26
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.3e-34 Score=315.42 Aligned_cols=244 Identities=22% Similarity=0.247 Sum_probs=209.8
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEE----ecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMS----LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~----l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
.|...|.+++|+| + ..|++|+.||+|+|||+.+++.+.. +.+|...|++++|+|++++|++|+.|++|++||+.
T Consensus 80 ~~~~~v~~~~~s~-d-~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 80 QTEAGVADLTWVG-E-RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EESSCEEEEEEET-T-TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ccCCCEEEEEEeC-C-CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 3567899999999 5 4788999999999999998875443 45899999999999999999999999999999999
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEEc--CCCCCeEEEEEec-CCCEEEEEeCCC
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYR--GHSKSINSIRFSP-DGQWIASGGEDG 164 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~~--~h~~~V~sLafSP-dg~~Lasgs~DG 164 (845)
+++++..+.+|...|.+++|++++ .+|++++.|++|++||++++++...+. .+...+.+++|+| ++++|++|+.||
T Consensus 158 ~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 158 QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 999999999999999999999988 478999999999999999999888774 3556789999999 467899999999
Q ss_pred cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchh
Q psy467 165 VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244 (845)
Q Consensus 165 ~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~ 244 (845)
.|++ ||+++++. +..+.+|... |
T Consensus 238 ~v~~-------------wd~~~~~~--------------------~~~~~~h~~~-------v----------------- 260 (344)
T 4gqb_B 238 TVSL-------------VDTKSTSC--------------------VLSSAVHSQC-------V----------------- 260 (344)
T ss_dssp EEEE-------------EESCC--C--------------------CEEEECCSSC-------E-----------------
T ss_pred cEEE-------------EECCCCcE--------------------EEEEcCCCCC-------E-----------------
Confidence 9999 99998887 6777777766 6
Q ss_pred hhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCC
Q psy467 245 LFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSST 324 (845)
Q Consensus 245 l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~ 324 (845)
.+++|+|++. + +|++|+.|+.|+|||+.+++++ .+.+|.+.
T Consensus 261 ----------~~v~fsp~g~-----------------------~-----~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~ 301 (344)
T 4gqb_B 261 ----------TGLVFSPHSV-----------------------P-----FLASLSEDCSLAVLDSSLSELF-RSQAHRDF 301 (344)
T ss_dssp ----------EEEEECSSSS-----------------------C-----CEEEEETTSCEEEECTTCCEEE-EECCCSSC
T ss_pred ----------EEEEEccCCC-----------------------e-----EEEEEeCCCeEEEEECCCCcEE-EEcCCCCC
Confidence 6666776653 1 7999999999999999988765 57899999
Q ss_pred EEEEEEeCCCC-EEEEEeCCC-EEEEEecCCc
Q psy467 325 IRRLTFSEGGE-CLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 325 VtslafSpdG~-~Lasgs~DG-I~IWDl~tgk 354 (845)
|++++|+|+|+ +|++++.|+ |++|++.+..
T Consensus 302 V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 302 VRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 99999999986 677999999 9999998754
No 27
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.2e-33 Score=300.40 Aligned_cols=278 Identities=18% Similarity=0.288 Sum_probs=239.9
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee---EEEec--CCCCCeEEEEEcCCCCEEEEEECCCcE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC---IMSLS--GHSTPVESVQFGNGEETLSAGCQSGSI 82 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~---i~~l~--~h~~~V~sLafSpdg~~LaSgs~DGtV 82 (845)
.....+|.+.|++++|+| ++++|++++ ||.|++|++.+++. +..+. +|...|.+++|+|++++|++++.||.|
T Consensus 44 ~~~~~~h~~~v~~~~~~~-~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 121 (337)
T 1gxr_A 44 QINTLNHGEVVCAVTISN-PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTL 121 (337)
T ss_dssp EEEEECCSSCCCEEEECS-SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEE
T ss_pred cceeccCCCceEEEEEec-CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcE
Confidence 344558999999999999 999999998 99999999987653 33333 799999999999999999999999999
Q ss_pred EEEECCCCc--EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEE
Q psy467 83 KIWNLAVPT--VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 83 ~VWDl~tg~--~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasg 160 (845)
++||+.+++ ....+..|...|.+++|+|++++|++++.||.|++||+++++.+..+..|...+.+++|+|++++|+++
T Consensus 122 ~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 201 (337)
T 1gxr_A 122 SIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG 201 (337)
T ss_dssp EEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEE
Confidence 999999887 667778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccc
Q psy467 161 GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQA 240 (845)
Q Consensus 161 s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~ 240 (845)
+.||.|++ ||+++++. +..+. +... +
T Consensus 202 ~~dg~i~~-------------~d~~~~~~--------------------~~~~~-~~~~-------v------------- 227 (337)
T 1gxr_A 202 GLDNTVRS-------------WDLREGRQ--------------------LQQHD-FTSQ-------I------------- 227 (337)
T ss_dssp ETTSEEEE-------------EETTTTEE--------------------EEEEE-CSSC-------E-------------
T ss_pred ecCCcEEE-------------EECCCCce--------------------Eeeec-CCCc-------e-------------
Confidence 99999999 99988766 33322 1122 2
Q ss_pred cchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy467 241 GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 241 ~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g 320 (845)
..++|+|++. ++++++.|+.|++||+.+++.. .+..
T Consensus 228 --------------~~~~~s~~~~-----------------------------~l~~~~~~~~i~~~~~~~~~~~-~~~~ 263 (337)
T 1gxr_A 228 --------------FSLGYCPTGE-----------------------------WLAVGMESSNVEVLHVNKPDKY-QLHL 263 (337)
T ss_dssp --------------EEEEECTTSS-----------------------------EEEEEETTSCEEEEETTSSCEE-EECC
T ss_pred --------------EEEEECCCCC-----------------------------EEEEEcCCCcEEEEECCCCCeE-EEcC
Confidence 4455555554 9999999999999999988754 6778
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEee
Q psy467 321 NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSH 386 (845)
Q Consensus 321 h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~ 386 (845)
|...|.+++|+|++++|++++.|+ |++|++.+++.+... .|...|.+++|+ ++++|+++ +.+|.+
T Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 999999999999999999999999 999999999887543 488999999999 88888877 889964
No 28
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.5e-33 Score=338.96 Aligned_cols=283 Identities=25% Similarity=0.367 Sum_probs=244.9
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC-----CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK-----SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSI 82 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t-----~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV 82 (845)
...+.+|.+.|+|++|+|+++++|++|+.|++|++|++.+ +.....+.+|...|.+++|+|++++|++|+.||+|
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 4578999999999999996678999999999999999865 34567889999999999999999999999999999
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE---cCCCCCeEEEEEecCC--CEE
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY---RGHSKSINSIRFSPDG--QWI 157 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~---~~h~~~V~sLafSPdg--~~L 157 (845)
++||+.++..+..+.+|...|.+++|+|++++|++|+.|++|++||+......... .+|...|.+++|+|++ ..+
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 99999999999999999999999999999999999999999999998654333222 3588889999999986 689
Q ss_pred EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccc
Q psy467 158 ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE 237 (845)
Q Consensus 158 asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~ 237 (845)
++++.|+.|++ ||+++++. ...+.+|... |
T Consensus 535 ~s~s~d~~v~v-------------wd~~~~~~--------------------~~~~~~h~~~-------v---------- 564 (694)
T 3dm0_A 535 VSASWDKTVKV-------------WNLSNCKL--------------------RSTLAGHTGY-------V---------- 564 (694)
T ss_dssp EEEETTSCEEE-------------EETTTCCE--------------------EEEECCCSSC-------E----------
T ss_pred EEEeCCCeEEE-------------EECCCCcE--------------------EEEEcCCCCC-------E----------
Confidence 99999999999 99987776 6666666665 5
Q ss_pred ccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE
Q psy467 238 DQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST 317 (845)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t 317 (845)
.+++|+|++. +|++|+.||.|++||+.+++++..
T Consensus 565 -----------------~~v~~spdg~-----------------------------~l~sg~~Dg~i~iwd~~~~~~~~~ 598 (694)
T 3dm0_A 565 -----------------STVAVSPDGS-----------------------------LCASGGKDGVVLLWDLAEGKKLYS 598 (694)
T ss_dssp -----------------EEEEECTTSS-----------------------------EEEEEETTSBCEEEETTTTEEEEC
T ss_pred -----------------EEEEEeCCCC-----------------------------EEEEEeCCCeEEEEECCCCceEEE
Confidence 6666666666 999999999999999999999888
Q ss_pred ecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecCCC-------------------CCeEEEEEc-CCceE
Q psy467 318 TEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPMGW-------------------GKVQDLAVT-GTQLW 377 (845)
Q Consensus 318 l~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~h~-------------------~~VtsVafS-dg~lL 377 (845)
+.. ...|.+++|+|++.+|++++.++|+|||+.+++++..+..+. ..+++++|+ +|++|
T Consensus 599 ~~~-~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l 677 (694)
T 3dm0_A 599 LEA-NSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTL 677 (694)
T ss_dssp CBC-SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEE
T ss_pred ecC-CCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEE
Confidence 775 467999999999999998887779999999998887765432 137899999 99999
Q ss_pred EEE-----EEEEeeC
Q psy467 378 FRR-----VGTWSHQ 387 (845)
Q Consensus 378 aaS-----VsiW~~d 387 (845)
+++ |.+|.+.
T Consensus 678 ~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 678 FSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEETTSEEEEEEC-
T ss_pred EEEcCCCeEEEEecc
Confidence 888 9999764
No 29
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9e-34 Score=361.20 Aligned_cols=365 Identities=21% Similarity=0.323 Sum_probs=295.6
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcC--CCCEE
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN--GEETL 73 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSp--dg~~L 73 (845)
++++|+ +.++.+|.+.|.+++|+| ++++||+++.||.|++||+.+++.+..+.+|...|.+++|+| ++.++
T Consensus 638 ~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 716 (1249)
T 3sfz_A 638 TLQVFKAETGEKLLDIKAHEDEVLCCAFSS-DDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLL 716 (1249)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEE
T ss_pred eEEEEECCCCCEEEEeccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEE
Confidence 467787 467899999999999999 999999999999999999999999999999999999999999 55689
Q ss_pred EEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce-------------------
Q psy467 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC------------------- 134 (845)
Q Consensus 74 aSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~------------------- 134 (845)
++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.++..
T Consensus 717 ~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1249)
T 3sfz_A 717 ATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPED 796 (1249)
T ss_dssp EEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------C
T ss_pred EEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999865432
Q ss_pred ------------------------------------------------------------------------------EE
Q psy467 135 ------------------------------------------------------------------------------IY 136 (845)
Q Consensus 135 ------------------------------------------------------------------------------l~ 136 (845)
+.
T Consensus 797 ~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~ 876 (1249)
T 3sfz_A 797 VEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVA 876 (1249)
T ss_dssp CCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEE
T ss_pred ccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceee
Confidence 22
Q ss_pred EEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeee--------------------------------------------
Q psy467 137 TYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF-------------------------------------------- 172 (845)
Q Consensus 137 ~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~-------------------------------------------- 172 (845)
.+.+|...|.+++|+|+|++|++++.||.+++|+.-
T Consensus 877 ~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (1249)
T 3sfz_A 877 DCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQI 956 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCE
T ss_pred ecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceE
Confidence 234566778889999999999999999999987621
Q ss_pred ----------------------ccCCceeEEEECCCCccCCCC--CCCCCcceeecCCCCeEEEEecCCCCCccceeeEe
Q psy467 173 ----------------------HLTNTSIHVVDLSLVHPLGTP--PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVT 228 (845)
Q Consensus 173 ----------------------~~~~~~I~vWDl~tg~~l~~~--~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~ 228 (845)
...++.+.+||+.++...... +...+.+++|+|+++.+.+.. .++.+.+|
T Consensus 957 ~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~------~dg~i~vw 1030 (1249)
T 3sfz_A 957 DYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSS------EDSVIQVW 1030 (1249)
T ss_dssp EEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEEC------SSSBEEEE
T ss_pred EEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEc------CCCEEEEE
Confidence 124467888888887765443 366788999999998877632 22345566
Q ss_pred eecccccccccccchhhhhhccCCCceeEEEcCCCCcC-------------CCCc----ccccccCceeEEEcCCCCccc
Q psy467 229 RIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLN-------------RSGT----CVPVSVSRTSLSILPQSPMLC 291 (845)
Q Consensus 229 ~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~-------------~~~~----~~~~~~~I~slafSPdg~~~~ 291 (845)
++........ .........+.|++++... ..+. ...+...|.+++|+|+++
T Consensus 1031 d~~~~~~~~~---------~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~--- 1098 (1249)
T 3sfz_A 1031 NWQTGDYVFL---------QAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDAT--- 1098 (1249)
T ss_dssp ETTTTEEECC---------BCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSS---
T ss_pred ECCCCceEEE---------ecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCC---
Confidence 5544322111 1112223556666654421 1111 223567889999999999
Q ss_pred ceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe---------cC
Q psy467 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ---------PM 361 (845)
Q Consensus 292 ~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl---------~~ 361 (845)
++++++.||.|++||+.+++++..+.+|.+.|++++|+|+|++|++|+.|| |++||+.+++.+..+ ..
T Consensus 1099 --~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 1176 (1249)
T 3sfz_A 1099 --KFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTAT 1176 (1249)
T ss_dssp --SCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------
T ss_pred --EEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccc
Confidence 899999999999999999999999999999999999999999999999999 999999999877665 67
Q ss_pred CCCCeEEEEEc-CCceEEEE---EEEEeeC
Q psy467 362 GWGKVQDLAVT-GTQLWFRR---VGTWSHQ 387 (845)
Q Consensus 362 h~~~VtsVafS-dg~lLaaS---VsiW~~d 387 (845)
|.+.|++++|+ +|++++++ +.+|...
T Consensus 1177 ~~~~v~~l~fs~dg~~l~s~~g~v~vwd~~ 1206 (1249)
T 3sfz_A 1177 HGGWVTDVCFSPDSKTLVSAGGYLKWWNVA 1206 (1249)
T ss_dssp CCSCCCEEEECTTSSCEEEESSSEEEBCSS
T ss_pred cCceEEEEEECCCCCEEEECCCeEEEEECC
Confidence 88999999999 99999887 9999764
No 30
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-33 Score=295.30 Aligned_cols=279 Identities=16% Similarity=0.210 Sum_probs=243.8
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
...+.+.+|.+.|++++| + ++++|++|+.||.|++||+.+++....+..|...|.+++|+|++++|++++.||.|++|
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-V-DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-E-ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-c-CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEE
Confidence 456789999999999999 7 89999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCC---cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec-CCCEEEEEe
Q psy467 86 NLAVP---TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP-DGQWIASGG 161 (845)
Q Consensus 86 Dl~tg---~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP-dg~~Lasgs 161 (845)
++... +.+..+..|...|.+++| +++++++++.||.|++|| .+..+..+..|...+.+++|+| +++++++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 162 (313)
T 3odt_A 87 PLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTAS 162 (313)
T ss_dssp ETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEE
T ss_pred EeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEE
Confidence 98764 567788889999999999 577999999999999999 6788888999999999999998 899999999
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEec-CCCCCccceeeEeeecccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTK-GRPGGTKAKIDVTRIEENAESEDQA 240 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~-h~~~~~~~~i~V~~i~~~~~~~~~~ 240 (845)
.||.+++ ||.. +. ...+.. +..
T Consensus 163 ~d~~i~i-------------~d~~--~~--------------------~~~~~~~~~~---------------------- 185 (313)
T 3odt_A 163 ADKTIKL-------------WQND--KV--------------------IKTFSGIHND---------------------- 185 (313)
T ss_dssp TTSCEEE-------------EETT--EE--------------------EEEECSSCSS----------------------
T ss_pred CCCCEEE-------------EecC--ce--------------------EEEEeccCcc----------------------
Confidence 9999999 9832 22 233322 222
Q ss_pred cchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy467 241 GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 241 ~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g 320 (845)
.+.+++|+|++ .+++++.||.|++||+++++++..+.+
T Consensus 186 ------------------------------------~i~~~~~~~~~------~~~~~~~dg~i~i~d~~~~~~~~~~~~ 223 (313)
T 3odt_A 186 ------------------------------------VVRHLAVVDDG------HFISCSNDGLIKLVDMHTGDVLRTYEG 223 (313)
T ss_dssp ------------------------------------CEEEEEEEETT------EEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred ------------------------------------cEEEEEEcCCC------eEEEccCCCeEEEEECCchhhhhhhhc
Confidence 23444444444 378899999999999999999999999
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE----EEEEeeCCCC
Q psy467 321 NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR----VGTWSHQDSG 390 (845)
Q Consensus 321 h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS----VsiW~~d~~~ 390 (845)
|...|++++|+|+| .|++++.|+ |++||+.+++.+..+..|...|++++|+ ++++++++ |.+|..+...
T Consensus 224 ~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 224 HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGG
T ss_pred CCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCc
Confidence 99999999999999 588999999 9999999999999999999999999999 88877766 9999876543
No 31
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.6e-33 Score=302.62 Aligned_cols=254 Identities=18% Similarity=0.352 Sum_probs=227.8
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
++++|+ ++.+.+|...|.+++|+| ++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++
T Consensus 36 ~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 114 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLS 114 (304)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEE
T ss_pred cEEEEECCCCceeEEeeccCCcEEEEEEeC-CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEE
Confidence 467887 467889999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred EECCCcEEEEECCCC-cEEEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEEc-CCCCCeEEEEEec
Q psy467 76 GCQSGSIKIWNLAVP-TVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTYR-GHSKSINSIRFSP 152 (845)
Q Consensus 76 gs~DGtV~VWDl~tg-~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~~-~h~~~V~sLafSP 152 (845)
|+.|++|++||++++ .....+.+|...|.+++|+| ++.+|++|+.|+.|++||++++.....+. .+...+..++|+|
T Consensus 115 gs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 194 (304)
T 2ynn_A 115 GSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYP 194 (304)
T ss_dssp EETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECC
T ss_pred ECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEE
Confidence 999999999999987 55677889999999999999 67899999999999999998877666554 4567899999987
Q ss_pred --CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeee
Q psy467 153 --DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRI 230 (845)
Q Consensus 153 --dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i 230 (845)
++.+|++++.|+.|++ ||++++++ +..+.+|... +
T Consensus 195 ~~~~~~l~s~s~D~~i~i-------------Wd~~~~~~--------------------~~~~~~h~~~-------v--- 231 (304)
T 2ynn_A 195 LPDKPYMITASDDLTIKI-------------WDYQTKSC--------------------VATLEGHMSN-------V--- 231 (304)
T ss_dssp STTCCEEEEEETTSEEEE-------------EETTTTEE--------------------EEEEECCSSC-------E---
T ss_pred cCCCCEEEEEcCCCeEEE-------------EeCCCCcc--------------------ceeeCCCCCC-------E---
Confidence 7789999999999999 99998887 7778888776 6
Q ss_pred cccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC
Q psy467 231 EENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE 310 (845)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~ 310 (845)
..++|+|++. +|++|+.||.|++||+.
T Consensus 232 ------------------------~~~~~~p~~~-----------------------------~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 232 ------------------------SFAVFHPTLP-----------------------------IIISGSEDGTLKIWNSS 258 (304)
T ss_dssp ------------------------EEEEECSSSS-----------------------------EEEEEETTSCEEEEETT
T ss_pred ------------------------EEEEECCCCC-----------------------------EEEEEcCCCeEEEEECC
Confidence 6677777776 99999999999999999
Q ss_pred CCeEEEEecCCCCCEEEEEEeCCCC--EEEEEeCCCEEEEEecC
Q psy467 311 KFSLVSTTEKNSSTIRRLTFSEGGE--CLLGGDTEGLKVYGWEP 352 (845)
Q Consensus 311 s~~~l~tl~gh~~~VtslafSpdG~--~Lasgs~DGI~IWDl~t 352 (845)
+++++.++..|...+.+++|+|++. ++++|+.||+.+|++..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~ 302 (304)
T 2ynn_A 259 TYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (304)
T ss_dssp TCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC-
T ss_pred CCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEecc
Confidence 9999999999999999999999875 68999988888888764
No 32
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.4e-33 Score=306.60 Aligned_cols=298 Identities=15% Similarity=0.182 Sum_probs=239.8
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe--eEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN--CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~--~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
.+..|.+.|++++|+| ++++|++++.|+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.||.|++||+
T Consensus 3 ~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp EEESCSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred eecccCCCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 3556999999999999 99999999999999999999887 88899999999999999999999999999999999999
Q ss_pred CCCcEEEEE--cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce---EEE-EcCCCCCeEEEEEecCCCEEEEEe
Q psy467 88 AVPTVQRTL--NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC---IYT-YRGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 88 ~tg~~v~~l--~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~---l~~-~~~h~~~V~sLafSPdg~~Lasgs 161 (845)
.+++....+ ..|...|.+++|+|++++|++++.||.|++||++.+.. ... ...|...|.+++|+|++++|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc
Confidence 988755443 66889999999999999999999999999999987762 333 356889999999999999999999
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
.||.|++ ||+............. .. .-.+.+..+..+..|
T Consensus 162 ~dg~i~~-------------~d~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~------------------------- 201 (372)
T 1k8k_C 162 CDFKCRI-------------FSAYIKEVEERPAPTP-WG-SKMPFGELMFESSSS------------------------- 201 (372)
T ss_dssp TTSCEEE-------------EECCCTTTSCCCCCBT-TB-SCCCTTCEEEECCCC-------------------------
T ss_pred CCCCEEE-------------EEcccccccccccccc-cc-cccchhhheEecCCC-------------------------
Confidence 9999999 9987544311100000 00 000011112222222
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN 321 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh 321 (845)
...+.+++|+|+++ +|++++.|+.|++||+++++++..+..|
T Consensus 202 ---------------------------------~~~v~~~~~~~~~~-----~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 243 (372)
T 1k8k_C 202 ---------------------------------CGWVHGVCFSANGS-----RVAWVSHDSTVCLADADKKMAVATLASE 243 (372)
T ss_dssp ---------------------------------SSCEEEEEECSSSS-----EEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred ---------------------------------CCeEEEEEECCCCC-----EEEEEeCCCEEEEEECCCCceeEEEccC
Confidence 23456666666666 9999999999999999999999999999
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC--Cce--------------------------------E------EEe-
Q psy467 322 SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP--ARQ--------------------------------Y------DAQ- 359 (845)
Q Consensus 322 ~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t--gk~--------------------------------l------~tl- 359 (845)
...|.+++|+|++++|++| .|+ |++|++.+ ++. . ..+
T Consensus 244 ~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (372)
T 1k8k_C 244 TLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLD 322 (372)
T ss_dssp SCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCS
T ss_pred CCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccccc
Confidence 9999999999999999888 777 99999988 421 0 223
Q ss_pred cCCCCCeEEEEEc--CC---ceEEEE-----EEEEeeC
Q psy467 360 PMGWGKVQDLAVT--GT---QLWFRR-----VGTWSHQ 387 (845)
Q Consensus 360 ~~h~~~VtsVafS--dg---~lLaaS-----VsiW~~d 387 (845)
.+|.+.|++++|+ +| .+|+++ |.+|.++
T Consensus 323 ~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 323 SLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp SSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred ccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 4899999999977 55 777777 9999763
No 33
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.2e-33 Score=302.54 Aligned_cols=252 Identities=25% Similarity=0.408 Sum_probs=220.9
Q ss_pred cceeeee-----------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCC
Q psy467 2 RAKVEKA-----------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70 (845)
Q Consensus 2 ~irlw~l-----------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg 70 (845)
++++|++ +.|.+|...|.+++|+| ++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++
T Consensus 41 ~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~ 119 (319)
T 3frx_A 41 TLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA-DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA 119 (319)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred cEEEecCCCCCccccccceEEeCCcccEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCC
Confidence 4677864 46889999999999999 99999999999999999999999999999999999999999999
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccC------CCEEEEEECCCeEEEEECCCCceEEEEcCCCCC
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPY------GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS 144 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspd------g~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~ 144 (845)
.+|++|+.|++|++||+. +..+..+.+|...|.+++|+|. +..|++++.|+.|++||+++.+....+.+|...
T Consensus 120 ~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~ 198 (319)
T 3frx_A 120 SMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSN 198 (319)
T ss_dssp CEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSC
T ss_pred CEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCc
Confidence 999999999999999997 5677888899999999999985 448999999999999999999999999999999
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 145 INSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 145 V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
|.+++|+|++++|++++.||.|++ ||+.+++. +..+..+ ..
T Consensus 199 v~~~~~sp~g~~l~s~~~dg~i~i-------------wd~~~~~~--------------------~~~~~~~-~~----- 239 (319)
T 3frx_A 199 INTLTASPDGTLIASAGKDGEIML-------------WNLAAKKA--------------------MYTLSAQ-DE----- 239 (319)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEE-------------EETTTTEE--------------------EEEEECC-SC-----
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEE-------------EECCCCcE--------------------EEEecCC-Cc-----
Confidence 999999999999999999999999 99998776 4444332 12
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
+ ..++|+|++. ++++++. +.+
T Consensus 240 --v---------------------------~~~~~sp~~~-----------------------------~la~~~~-~~i 260 (319)
T 3frx_A 240 --V---------------------------FSLAFSPNRY-----------------------------WLAAATA-TGI 260 (319)
T ss_dssp --E---------------------------EEEEECSSSS-----------------------------EEEEEET-TEE
T ss_pred --E---------------------------EEEEEcCCCC-----------------------------EEEEEcC-CCc
Confidence 3 4555555555 8888765 569
Q ss_pred EEEECCCCeEEEEecC--------CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 305 NFWDLEKFSLVSTTEK--------NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~g--------h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
++|++.....+..+.. |...+.+++|+|||++|++|+.|+ |+|||+.++
T Consensus 261 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 261 KVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred EEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 9999998887777653 356799999999999999999999 999999764
No 34
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.3e-33 Score=337.41 Aligned_cols=289 Identities=22% Similarity=0.328 Sum_probs=256.7
Q ss_pred eeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
++...+.|.+|.+.|++++|+| ++++||+|+.||.|+|||+.+++.+..+.+|...|.+++|+|++++|++|+.||.|+
T Consensus 2 ~l~~~~~~~~h~~~v~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 2 KLDIKKTFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (814)
T ss_dssp CCCCEEEEEEECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred CcccceeeecCCCceEEEEECC-CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEE
Confidence 3445678999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEec-CCCEEEEEe
Q psy467 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSP-DGQWIASGG 161 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSP-dg~~Lasgs 161 (845)
+||+.+++.+..+.+|...|++++|+|++++|++++.||.|++||+.++ .....+.+|...|.+++|+| +++.|++++
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe
Confidence 9999999999999999999999999999999999999999999999886 67788888999999999999 889999999
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCC-CCCccceeeEeeecccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGR-PGGTKAKIDVTRIEENAESEDQA 240 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~-~~~~~~~i~V~~i~~~~~~~~~~ 240 (845)
.||.|++ ||+.++.. ...+..+. .. +
T Consensus 161 ~dg~v~v-------------wd~~~~~~--------------------~~~~~~~~~~~-------v------------- 187 (814)
T 3mkq_A 161 LDRTVKV-------------WSLGQSTP--------------------NFTLTTGQERG-------V------------- 187 (814)
T ss_dssp TTSEEEE-------------EETTCSSC--------------------SEEEECCCTTC-------C-------------
T ss_pred CCCeEEE-------------EECCCCcc--------------------eeEEecCCCCC-------E-------------
Confidence 9999999 99987665 33332222 22 2
Q ss_pred cchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy467 241 GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 241 ~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g 320 (845)
..++|+|.. ++. ++++++.||.|++||+.+++++..+.+
T Consensus 188 --------------~~~~~~~~~----------------------~~~-----~l~~~~~dg~i~~~d~~~~~~~~~~~~ 226 (814)
T 3mkq_A 188 --------------NYVDYYPLP----------------------DKP-----YMITASDDLTIKIWDYQTKSCVATLEG 226 (814)
T ss_dssp --------------CEEEECCST----------------------TCC-----EEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred --------------EEEEEEECC----------------------CCC-----EEEEEeCCCEEEEEECCCCcEEEEEcC
Confidence 445555510 344 999999999999999999999999999
Q ss_pred CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCc--eEEEE----EEEEeeC
Q psy467 321 NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQ--LWFRR----VGTWSHQ 387 (845)
Q Consensus 321 h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~--lLaaS----VsiW~~d 387 (845)
|...|++++|+|+|++|++++.|| |++||+.+++.+..+..|...|++++|+ +++ +++++ +.+|...
T Consensus 227 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (814)
T 3mkq_A 227 HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (814)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECS
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcC
Confidence 999999999999999999999999 9999999999999999999999999999 766 45555 7777653
No 35
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-33 Score=315.93 Aligned_cols=298 Identities=15% Similarity=0.132 Sum_probs=253.7
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l 96 (845)
.+++++|+| ++++|++++.||.|++||+.+++....+..| ..+....|++++++|++|+.||.|++||+.+++....+
T Consensus 58 ~~~~~~~s~-~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 58 AGKGNTFEK-VGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID 135 (420)
T ss_dssp CCTTCEEEE-EETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEET
T ss_pred cccceeeee-cCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeec
Confidence 355899999 9999999999999999999887776666655 44555578999999999999999999999999988888
Q ss_pred cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCC
Q psy467 97 NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN 176 (845)
Q Consensus 97 ~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~ 176 (845)
.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~i-------- 207 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRL-------- 207 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEE--------
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEE--------
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCcee
Q psy467 177 TSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYS 256 (845)
Q Consensus 177 ~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 256 (845)
||+++++. +..+..+.... -.+ ..
T Consensus 208 -----wd~~~~~~--------------------~~~~~~~~~~~----~~v---------------------------~~ 231 (420)
T 3vl1_A 208 -----WECGTGTT--------------------IHTFNRKENPH----DGV---------------------------NS 231 (420)
T ss_dssp -----EETTTTEE--------------------EEEECBTTBTT----CCE---------------------------EE
T ss_pred -----eECCCCce--------------------eEEeecCCCCC----CCc---------------------------cE
Confidence 99998887 55555432210 003 56
Q ss_pred EEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec-CCCCCEEEEEEeCCCC
Q psy467 257 AIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE-KNSSTIRRLTFSEGGE 335 (845)
Q Consensus 257 l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~-gh~~~VtslafSpdG~ 335 (845)
+.+.+.+.. .........+.+++|+|+++ +|++|+.||.|++||+++++.+..+. .|...|++++|+|+++
T Consensus 232 ~~~~~~~~~---~~~~~~~~~v~~~~~s~~~~-----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 303 (420)
T 3vl1_A 232 IALFVGTDR---QLHEISTSKKNNLEFGTYGK-----YVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNA 303 (420)
T ss_dssp EEEEECCCS---SCGGGCCCCCCTTCSSCTTE-----EEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCT
T ss_pred EEEecCCcc---eeeecccCcccceEEcCCCC-----EEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCC
Confidence 667665541 12223356788999999998 99999999999999999998877775 4788999999999999
Q ss_pred -EEEEEeCCC-EEEEEecCCce-EEEecC-CCCCeEEEEEcCCceEEEE-----EEEEeeCC
Q psy467 336 -CLLGGDTEG-LKVYGWEPARQ-YDAQPM-GWGKVQDLAVTGTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 336 -~Lasgs~DG-I~IWDl~tgk~-l~tl~~-h~~~VtsVafSdg~lLaaS-----VsiW~~d~ 388 (845)
+|++|+.|| |++||+.+++. +..+.. |...|+++.|.++++|+++ |.+|.+..
T Consensus 304 ~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 304 NYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp TEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECC
T ss_pred CEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccC
Confidence 999999999 99999998754 677766 6778999977788888887 99998754
No 36
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.6e-33 Score=306.37 Aligned_cols=277 Identities=19% Similarity=0.305 Sum_probs=217.1
Q ss_pred cceeeeeE---------EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC--eeEEEecCCCCCeEEEEEcCCC
Q psy467 2 RAKVEKAE---------DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS--NCIMSLSGHSTPVESVQFGNGE 70 (845)
Q Consensus 2 ~irlw~l~---------~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~--~~i~~l~~h~~~V~sLafSpdg 70 (845)
++++|++. ...+|.+.|.+++|+| ++++||+|+.|++|+||++..+ +.+..+.+|...|.+++|+|++
T Consensus 39 ~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 117 (345)
T 3fm0_A 39 RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP-CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG 117 (345)
T ss_dssp CEEEEEEETTEEEEEEEECSSCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS
T ss_pred eEEEEEcCCCcceeeeeeccccCCcEEEEEECC-CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC
Confidence 47888753 2368999999999999 9999999999999999998766 4678899999999999999999
Q ss_pred CEEEEEECCCcEEEEECCCC---cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc--eEEEEcCCCCCe
Q psy467 71 ETLSAGCQSGSIKIWNLAVP---TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG--CIYTYRGHSKSI 145 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg---~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~--~l~~~~~h~~~V 145 (845)
++|++|+.|++|++||+.++ ..+..+.+|...|.+++|+|++++|++++.|+.|++||++++. +...+.+|...|
T Consensus 118 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v 197 (345)
T 3fm0_A 118 NLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTV 197 (345)
T ss_dssp SEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE
T ss_pred CEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCce
Confidence 99999999999999999876 3466788899999999999999999999999999999998775 457788999999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 146 NSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
.+++|+|+|++|++++.|+.|++ ||.......... ......+....+..+.+
T Consensus 198 ~~l~~sp~g~~l~s~s~D~~v~i-------------W~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---------- 249 (345)
T 3fm0_A 198 WSLAFDPSGQRLASCSDDRTVRI-------------WRQYLPGNEQGV-----ACSGSDPSWKCICTLSG---------- 249 (345)
T ss_dssp EEEEECTTSSEEEEEETTSCEEE-------------EEEECTTCTTCC-----CCC---CEEEEEEEECS----------
T ss_pred EEEEECCCCCEEEEEeCCCeEEE-------------eccccCCCCccc-----eeeccCCccceeEEecC----------
Confidence 99999999999999999999999 986433220000 00000000000111110
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
.+...|.+++|+|++. .|++++.|+.|+
T Consensus 250 -----------------------------------------------~h~~~v~~v~~~~~~~-----~l~s~~~d~~i~ 277 (345)
T 3fm0_A 250 -----------------------------------------------FHSRTIYDIAWCQLTG-----ALATACGDDAIR 277 (345)
T ss_dssp -----------------------------------------------SCSSCEEEEEECTTTC-----CEEEEETTSCEE
T ss_pred -----------------------------------------------CCCCcEEEEEEecCCC-----EEEEEeCCCeEE
Confidence 0224566777777777 899999999999
Q ss_pred EEECCCCe---------EEEEecCCCCCEEEEEEeCCC-CEEEEEeCCC-EEEEEecCCceEEEe
Q psy467 306 FWDLEKFS---------LVSTTEKNSSTIRRLTFSEGG-ECLLGGDTEG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 306 IWDl~s~~---------~l~tl~gh~~~VtslafSpdG-~~Lasgs~DG-I~IWDl~tgk~l~tl 359 (845)
+|+..... ......+|...|++++|+|++ .+||+|+.|| |++|++.+++....+
T Consensus 278 vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 278 VFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp EEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred EEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 99986542 223346899999999999998 5999999999 999999987765443
No 37
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.1e-33 Score=308.61 Aligned_cols=284 Identities=13% Similarity=0.171 Sum_probs=233.4
Q ss_pred eeEEeccCCCcEEEEEEecCCC-CEEEEEeCCCeEEEEECCCCeeEEEec--CCCCCeEEEEEcC-CCCEEEEEECCCcE
Q psy467 7 KAEDFMAHGASVNCLALGKKSG-QVLATGGDDKKVNLWALGKSNCIMSLS--GHSTPVESVQFGN-GEETLSAGCQSGSI 82 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg-~~LaTgs~DG~I~IWdl~t~~~i~~l~--~h~~~V~sLafSp-dg~~LaSgs~DGtV 82 (845)
..+.+.+|.+.|++++|+| ++ ++|++|+.||.|+|||+.+++....+. +|...|.+++|+| ++++|++++.|+.|
T Consensus 65 ~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHP-THPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp EEEEECCCSSCEEEEEECS-SCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred eEEeccCCCCCEEEEEECC-CCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 3568899999999999999 77 999999999999999999888777765 6999999999999 78999999999999
Q ss_pred EEEECCCCcEEEEEcCC---CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCC-EEE
Q psy467 83 KIWNLAVPTVQRTLNGH---KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ-WIA 158 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h---~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~-~La 158 (845)
++||+.+ ..+..+..+ ...|.+++|+|++++|++++.||.|++||+ +++.+..+..|...|.+++|+|+++ +|+
T Consensus 144 ~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 144 TLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMA 221 (383)
T ss_dssp EEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEE
T ss_pred EEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEE
Confidence 9999996 555555433 478999999999999999999999999999 5788899999999999999999998 999
Q ss_pred EEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccc
Q psy467 159 SGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238 (845)
Q Consensus 159 sgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~ 238 (845)
+++.|+.|++ ||+++++.. +..+..+ +|... +
T Consensus 222 s~~~d~~i~i-------------wd~~~~~~~----------------~~~~~~~-~~~~~-------v----------- 253 (383)
T 3ei3_B 222 TSSVDATVKL-------------WDLRNIKDK----------------NSYIAEM-PHEKP-------V----------- 253 (383)
T ss_dssp EEETTSEEEE-------------EEGGGCCST----------------TCEEEEE-ECSSC-------E-----------
T ss_pred EEeCCCEEEE-------------EeCCCCCcc----------------cceEEEe-cCCCc-------e-----------
Confidence 9999999999 999874430 1113322 33333 3
Q ss_pred cccchhhhhhccCCCceeEEEcC-CCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE
Q psy467 239 QAGEEELFATIANPCDYSAIFQP-HRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST 317 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fsp-dg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t 317 (845)
.+++|+| ++. +|++++.|+.|++||+++++.+..
T Consensus 254 ----------------~~~~~s~~~~~-----------------------------~l~~~~~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 254 ----------------NAAYFNPTDST-----------------------------KLLTTDQRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp ----------------EEEEECTTTSC-----------------------------EEEEEESSSEEEEEETTBTTSCSE
T ss_pred ----------------EEEEEcCCCCC-----------------------------EEEEEcCCCcEEEEECCCCccccc
Confidence 4455555 444 999999999999999998877666
Q ss_pred ecCCC-----------------CCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecC--CCCCeEEEEEc-CCce
Q psy467 318 TEKNS-----------------STIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPM--GWGKVQDLAVT-GTQL 376 (845)
Q Consensus 318 l~gh~-----------------~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~--h~~~VtsVafS-dg~l 376 (845)
+.+|. +.+..++|+|+|++ +++.|+ |+|||+.+++++..+.+ |...+..++|+ ++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~ 366 (383)
T 3ei3_B 289 IIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDV 366 (383)
T ss_dssp EEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSE
T ss_pred cccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccE
Confidence 65442 33445666666666 667888 99999999999999987 45778888999 9999
Q ss_pred EEEE----EEEEeeCC
Q psy467 377 WFRR----VGTWSHQD 388 (845)
Q Consensus 377 LaaS----VsiW~~d~ 388 (845)
|+++ |.+|.++.
T Consensus 367 l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 367 LASGMGFNILIWNRED 382 (383)
T ss_dssp EEEEETTEEEEEECC-
T ss_pred EEEecCCcEEEEecCC
Confidence 8887 99997653
No 38
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=8.8e-34 Score=308.33 Aligned_cols=308 Identities=17% Similarity=0.234 Sum_probs=246.5
Q ss_pred EeccCCCcEEEEEEecC---CCCEEEEEeCCCeEEEEECCCCeeEEEecC-----CCCCeEEEEEcCC----CCEEEEEE
Q psy467 10 DFMAHGASVNCLALGKK---SGQVLATGGDDKKVNLWALGKSNCIMSLSG-----HSTPVESVQFGNG----EETLSAGC 77 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~---dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~-----h~~~V~sLafSpd----g~~LaSgs 77 (845)
...+|.+.|++++|+|. ....+++++.++.|++|++.+++.+..+.. |...|.+++|+|+ +.+|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34589999999999983 345666666677999999998877766653 5678999999998 67999999
Q ss_pred CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEE---cCCCCCeEEEEEecC
Q psy467 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTY---RGHSKSINSIRFSPD 153 (845)
Q Consensus 78 ~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~---~~h~~~V~sLafSPd 153 (845)
.||.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++.+..+ ..|...|.+++|+|+
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC
Confidence 999999999999999999999999999999999 8999999999999999999999999888 679999999999999
Q ss_pred CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccc
Q psy467 154 GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEEN 233 (845)
Q Consensus 154 g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~ 233 (845)
+++|++++.||.|++ ||+++++...... ..+.+++++..+.....
T Consensus 173 ~~~l~~~~~dg~i~i-------------~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~~------------------ 217 (366)
T 3k26_A 173 GEKIMSCGMDHSLKL-------------WRINSKRMMNAIK----ESYDYNPNKTNRPFISQ------------------ 217 (366)
T ss_dssp SSEEEEEETTSCEEE-------------EESCSHHHHHHHH----HHHTCCGGGCSSCCCCE------------------
T ss_pred CCEEEEecCCCCEEE-------------EECCCCccccccc----eeEEecCCCCcccccce------------------
Confidence 999999999999999 9998876521110 01222232221111000
Q ss_pred ccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe
Q psy467 234 AESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS 313 (845)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~ 313 (845)
....+. ......+...|.+++|+ ++ ++++++.|+.|++||+.++.
T Consensus 218 -----------------------~~~~~~-----~~~~~~~~~~v~~~~~~--~~-----~l~~~~~d~~i~~wd~~~~~ 262 (366)
T 3k26_A 218 -----------------------KIHFPD-----FSTRDIHRNYVDCVRWL--GD-----LILSKSCENAIVCWKPGKME 262 (366)
T ss_dssp -----------------------EECCCS-----EEECSSCSSCCCEEEEE--TT-----EEEEECSSSEEEEEEESSTT
T ss_pred -----------------------eeccCc-----cccccCCcceEEEEEEc--CC-----EEEEEecCCEEEEEeCCCcc
Confidence 000000 00011234567888887 44 89999999999999998763
Q ss_pred --------------EEEEecCCCCCEEEEEEeCC--CCEEEEEeCCC-EEEEEecCCce----EEEecCC--CCCeEEEE
Q psy467 314 --------------LVSTTEKNSSTIRRLTFSEG--GECLLGGDTEG-LKVYGWEPARQ----YDAQPMG--WGKVQDLA 370 (845)
Q Consensus 314 --------------~l~tl~gh~~~VtslafSpd--G~~Lasgs~DG-I~IWDl~tgk~----l~tl~~h--~~~VtsVa 370 (845)
.+..+.+|...|++++|+|+ |++|++|+.|| |++||+.+++. ...+..| ...|++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~ 342 (366)
T 3k26_A 263 DDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTS 342 (366)
T ss_dssp CCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEE
T ss_pred ccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEE
Confidence 48888899999999999999 99999999999 99999998753 4477777 78999999
Q ss_pred Ec-CCceEEEE-----EEEEeeC
Q psy467 371 VT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 371 fS-dg~lLaaS-----VsiW~~d 387 (845)
|+ ++++|+++ |.+|.+.
T Consensus 343 ~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 343 FSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC-
T ss_pred eCCCCCeEEEEeCCCEEEEEEec
Confidence 99 89888887 8999753
No 39
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=9e-33 Score=322.82 Aligned_cols=352 Identities=14% Similarity=0.172 Sum_probs=268.6
Q ss_pred eEEeccCCCcEEEEEEecCCCC-EEEEEeCCCeEEEEECCCCeeEEEecCCCC---CeEEEEEcCC-CCEEEEEECCCcE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQ-VLATGGDDKKVNLWALGKSNCIMSLSGHST---PVESVQFGNG-EETLSAGCQSGSI 82 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~-~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~---~V~sLafSpd-g~~LaSgs~DGtV 82 (845)
+..+.+|.+.|.+++|+| ++. ++++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|+ +++|++++.||.|
T Consensus 153 ~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 231 (615)
T 1pgu_A 153 LGEVSGHSQRINACHLKQ-SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKI 231 (615)
T ss_dssp EEECCSCSSCEEEEEECS-SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCE
T ss_pred ceeeecCCccEEEEEECC-CCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeE
Confidence 567889999999999999 666 899999999999999999999999999999 9999999999 9999999999999
Q ss_pred EEEECCCCcEEEEE-c---CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCC----CCCeEEEEEecCC
Q psy467 83 KIWNLAVPTVQRTL-N---GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGH----SKSINSIRFSPDG 154 (845)
Q Consensus 83 ~VWDl~tg~~v~~l-~---~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h----~~~V~sLafSPdg 154 (845)
++||+.+++.+..+ . .|...|.+++|+ ++++|++++.||.|++||+++++.+..+..+ ...+.++.|+ ++
T Consensus 232 ~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 309 (615)
T 1pgu_A 232 SCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GN 309 (615)
T ss_dssp EEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ET
T ss_pred EEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CC
Confidence 99999999999999 5 799999999999 9999999999999999999999999888866 3678888886 89
Q ss_pred CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC--CCCCCcceeecCC--------------------------
Q psy467 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP--PPQYTSSVPFSHN-------------------------- 206 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~--~~~~i~svs~spd-------------------------- 206 (845)
+++++++.||.|++ ||+.+++.+..+ +...+.+++| |+
T Consensus 310 ~~l~~~~~~g~i~~-------------~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v 375 (615)
T 1pgu_A 310 GRIISLSLDGTLNF-------------YELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLI 375 (615)
T ss_dssp TEEEEEETTSCEEE-------------EETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCE
T ss_pred CeEEEEECCCCEEE-------------EECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCce
Confidence 99999999999999 666554433222 1333444444 33
Q ss_pred -------CCeEEEEecCCCCCccceeeEeeeccccccc---------c-------cccchhhhhh---------ccCCCc
Q psy467 207 -------TSLRKSFTKGRPGGTKAKIDVTRIEENAESE---------D-------QAGEEELFAT---------IANPCD 254 (845)
Q Consensus 207 -------g~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~---------~-------~~~~~~l~~~---------~~~~~~ 254 (845)
+..+.... ....+.+|++....... + ......++.. ......
T Consensus 376 ~~~~~~~~~~l~~~~------~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (615)
T 1pgu_A 376 VSLDNSKAQEYSSIS------WDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPG 449 (615)
T ss_dssp EEEECCSTTCCEEEE------TTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCE
T ss_pred EEEEECCCcEEEEEe------CCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCc
Confidence 22222111 11222333332211000 0 0000000000 001111
Q ss_pred eeEEEc--------C-CCCcC----CC-----CcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEE
Q psy467 255 YSAIFQ--------P-HRSLN----RS-----GTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS 316 (845)
Q Consensus 255 ~~l~fs--------p-dg~~~----~~-----~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~ 316 (845)
.+++|+ . ++... .. .....+...|++++|+|+++ +|++++.||.|++||+.+++++.
T Consensus 450 ~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-----~l~~~~~dg~i~iw~~~~~~~~~ 524 (615)
T 1pgu_A 450 SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET-----YIAAGDVMGKILLYDLQSREVKT 524 (615)
T ss_dssp EEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSS-----EEEEEETTSCEEEEETTTTEEEE
T ss_pred eEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCC-----EEEEcCCCCeEEEeeCCCCccee
Confidence 222222 1 11100 00 22234567899999999999 99999999999999999999999
Q ss_pred EecC-CCCCEEEEEEeC----------CCCEEEEEeCCC-EEEEEecCC-ceEEEecCCCCCeEEEEEc-CCceEEEE--
Q psy467 317 TTEK-NSSTIRRLTFSE----------GGECLLGGDTEG-LKVYGWEPA-RQYDAQPMGWGKVQDLAVT-GTQLWFRR-- 380 (845)
Q Consensus 317 tl~g-h~~~VtslafSp----------dG~~Lasgs~DG-I~IWDl~tg-k~l~tl~~h~~~VtsVafS-dg~lLaaS-- 380 (845)
.+.+ |...|++++|+| ++++|++++.|+ |++||+.++ +++..+.+|...|++++|+ +++ |+++
T Consensus 525 ~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~ 603 (615)
T 1pgu_A 525 SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGA 603 (615)
T ss_dssp CCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEET
T ss_pred EeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecC
Confidence 9988 999999999999 999999999999 999999998 7889999999999999999 888 6555
Q ss_pred ---EEEEeeCC
Q psy467 381 ---VGTWSHQD 388 (845)
Q Consensus 381 ---VsiW~~d~ 388 (845)
|.+|.++.
T Consensus 604 d~~v~iw~~~~ 614 (615)
T 1pgu_A 604 DACIKRWNVVL 614 (615)
T ss_dssp TSCEEEEEEC-
T ss_pred CceEEEEeeec
Confidence 99998753
No 40
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9.1e-33 Score=351.98 Aligned_cols=322 Identities=20% Similarity=0.297 Sum_probs=267.9
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
..+.+|.+.|++++|+| +|++||+|+.||+|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.
T Consensus 609 ~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQ-DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp EEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEecccccEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 46789999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEcCCCCCeEEEEEcc--CCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy467 89 VPTVQRTLNGHKSSITSVDFHP--YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafsp--dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I 166 (845)
+++.+..+.+|...|.+++|+| ++.++++|+.||.|++||+.+++++..+.+|...|.+++|+|+++++++++.||.|
T Consensus 688 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v 767 (1249)
T 3sfz_A 688 TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTL 767 (1249)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEE
T ss_pred CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeE
Confidence 9999999999999999999999 45689999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeeccCCceeEEEECCCCccCCCC---------------CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHPLGTP---------------PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~l~~~---------------~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
++ ||+.++...... ....+.+++|+|+|+.+...... .+.+|++.
T Consensus 768 ~v-------------wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~-------~v~~~d~~ 827 (1249)
T 3sfz_A 768 RL-------------WDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKN-------KVLLFDIH 827 (1249)
T ss_dssp EE-------------EEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETT-------EEEEEETT
T ss_pred EE-------------EeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCC-------cEEEEEec
Confidence 99 998776542211 12367789999999987765421 12232221
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK 311 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s 311 (845)
... ....+. ..+...+.+++|+|+++ ++++++.||.|++||+.+
T Consensus 828 ~~~--------------------~~~~~~-----------~~~~~~v~~~~~sp~~~-----~l~~~~~dg~v~vwd~~~ 871 (1249)
T 3sfz_A 828 TSG--------------------LLAEIH-----------TGHHSTIQYCDFSPYDH-----LAVIALSQYCVELWNIDS 871 (1249)
T ss_dssp TCC--------------------EEEEEE-----------CSSSSCCCEEEECSSTT-----EEEEECSSSCEEEEETTT
T ss_pred CCC--------------------ceeEEc-----------CCCCCceEEEEEcCCCC-----EEEEEeCCCeEEEEEcCC
Confidence 110 001111 12346788999999998 999999999999999999
Q ss_pred CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCce-----------------------------EEE---
Q psy467 312 FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ-----------------------------YDA--- 358 (845)
Q Consensus 312 ~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~-----------------------------l~t--- 358 (845)
+..+..+.+|...|++++|+|+|++|++++.|+ |++|++.+... +..
T Consensus 872 ~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 951 (1249)
T 3sfz_A 872 RLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAG 951 (1249)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEE
T ss_pred CceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEec
Confidence 999999999999999999999999999999999 99999653100 000
Q ss_pred -----ecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 359 -----QPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 359 -----l~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
...+...+++++|+ ++++++++ +.+|...
T Consensus 952 ~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~ 991 (1249)
T 3sfz_A 952 KTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELP 991 (1249)
T ss_dssp SSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETT
T ss_pred CcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcC
Confidence 01134568888888 78877777 7788654
No 41
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.4e-33 Score=305.47 Aligned_cols=253 Identities=24% Similarity=0.403 Sum_probs=222.8
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC------eeEEEecCCCCCeEEEEEcCC
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS------NCIMSLSGHSTPVESVQFGNG 69 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~------~~i~~l~~h~~~V~sLafSpd 69 (845)
++++|+ .+.+..|...|.+++|+| +|.+||+|+.|+.+++|++... .....+.+|...|.+++|+|+
T Consensus 87 ~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp-~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 165 (354)
T 2pbi_B 87 KVIVWDSFTTNKEHAVTMPCTWVMACAYAP-SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNS 165 (354)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCEEEECT-TSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSS
T ss_pred eEEEEECCCCCcceEEecCCCCEEEEEECC-CCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCC
Confidence 467886 467888999999999999 9999999999999999998543 345667789999999999999
Q ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEcc--CCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEE
Q psy467 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP--YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147 (845)
Q Consensus 70 g~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafsp--dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~s 147 (845)
+..|++++.|++|++||+++++.+..+.+|...|.+++|+| ++++|++|+.||.|++||+++++++..+..|...|.+
T Consensus 166 ~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~ 245 (354)
T 2pbi_B 166 DMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNS 245 (354)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEE
Confidence 99999999999999999999999999999999999999988 4689999999999999999999999999999999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeE
Q psy467 148 IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDV 227 (845)
Q Consensus 148 LafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V 227 (845)
++|+|++++|++++.|+.|++ ||++.+.. +..+..+..
T Consensus 246 v~~~p~~~~l~s~s~D~~v~l-------------wd~~~~~~--------------------~~~~~~~~~--------- 283 (354)
T 2pbi_B 246 VRYYPSGDAFASGSDDATCRL-------------YDLRADRE--------------------VAIYSKESI--------- 283 (354)
T ss_dssp EEECTTSSEEEEEETTSCEEE-------------EETTTTEE--------------------EEEECCTTC---------
T ss_pred EEEeCCCCEEEEEeCCCeEEE-------------EECCCCcE--------------------EEEEcCCCc---------
Confidence 999999999999999999999 99987655 333221110
Q ss_pred eeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEE
Q psy467 228 TRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFW 307 (845)
Q Consensus 228 ~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IW 307 (845)
...+.+++|+|+++ +|++|+.|+.|++|
T Consensus 284 -----------------------------------------------~~~~~~~~~s~~g~-----~l~~g~~d~~i~vw 311 (354)
T 2pbi_B 284 -----------------------------------------------IFGASSVDFSLSGR-----LLFAGYNDYTINVW 311 (354)
T ss_dssp -----------------------------------------------CSCEEEEEECTTSS-----EEEEEETTSCEEEE
T ss_pred -----------------------------------------------ccceeEEEEeCCCC-----EEEEEECCCcEEEE
Confidence 01234455555555 99999999999999
Q ss_pred ECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Q psy467 308 DLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 308 Dl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWD 349 (845)
|+.+++++..+.+|.+.|++++|+|+|++|++|+.|+ |+||+
T Consensus 312 d~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 312 DVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999999999999999999999999999999999 99996
No 42
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.3e-33 Score=303.20 Aligned_cols=282 Identities=17% Similarity=0.246 Sum_probs=233.2
Q ss_pred EEeccCCCcEEEEEEecCCCC-EEEEEeC---CCeEEEEECCCCeeEEEe-cCCCCCeEEEEEcCC---CCEEEEEECCC
Q psy467 9 EDFMAHGASVNCLALGKKSGQ-VLATGGD---DKKVNLWALGKSNCIMSL-SGHSTPVESVQFGNG---EETLSAGCQSG 80 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~-~LaTgs~---DG~I~IWdl~t~~~i~~l-~~h~~~V~sLafSpd---g~~LaSgs~DG 80 (845)
+.+.+|.+.|.+++|+| ++. ++++|+. ||.|++|++.+++..... .+|...|.+++|+|+ +.+|++|+.||
T Consensus 12 ~~~~~h~~~v~~~~~~p-~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVP-CSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEEECSSCEEEEEECT-TSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hhccCCCCceEEEEEcC-CCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 45688999999999999 664 5556665 899999999988765443 368999999999998 69999999999
Q ss_pred cEEEEECCCCc-EEEEEcCCCCCeEEEEE------ccCCCEEEEEECCCeEEEEECCCCc-eEEEEcCCCC----CeEEE
Q psy467 81 SIKIWNLAVPT-VQRTLNGHKSSITSVDF------HPYGDYLCSGSLDSFIKLWDLRRKG-CIYTYRGHSK----SINSI 148 (845)
Q Consensus 81 tV~VWDl~tg~-~v~~l~~h~~~V~~laf------spdg~~Lasgs~DG~I~IWDl~t~~-~l~~~~~h~~----~V~sL 148 (845)
.|++||+.+++ .+..+.+|...|.+++| +|++++|++++.||.|++||++++. .+..+..+.+ .+.++
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEE
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEE
Confidence 99999999988 88899999999999955 6789999999999999999999887 6777766554 78999
Q ss_pred E----EecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 149 R----FSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 149 a----fSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
+ |+|+++++++++.||.|++ ||+++++. ... ..+...
T Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i-------------~d~~~~~~--------------------~~~-~~~~~~----- 211 (357)
T 3i2n_A 171 AFGNAYNQEERVVCAGYDNGDIKL-------------FDLRNMAL--------------------RWE-TNIKNG----- 211 (357)
T ss_dssp EEECCCC-CCCEEEEEETTSEEEE-------------EETTTTEE--------------------EEE-EECSSC-----
T ss_pred EEEeccCCCCCEEEEEccCCeEEE-------------EECccCce--------------------eee-cCCCCc-----
Confidence 8 6789999999999999999 99987665 222 223333
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcC---CCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQP---HRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD 301 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fsp---dg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D 301 (845)
+ .++.|+| ++. ++++++.|
T Consensus 212 --v---------------------------~~~~~~~~~~~~~-----------------------------~l~~~~~d 233 (357)
T 3i2n_A 212 --V---------------------------CSLEFDRKDISMN-----------------------------KLVATSLE 233 (357)
T ss_dssp --E---------------------------EEEEESCSSSSCC-----------------------------EEEEEEST
T ss_pred --e---------------------------EEEEcCCCCCCCC-----------------------------EEEEECCC
Confidence 3 5555555 444 89999999
Q ss_pred CeEEEEECCCCeEEEEe-----cCCCCCEEEEEEeCCCC-EEEEEeCCC-EEEEEecCC-------------------ce
Q psy467 302 RTVNFWDLEKFSLVSTT-----EKNSSTIRRLTFSEGGE-CLLGGDTEG-LKVYGWEPA-------------------RQ 355 (845)
Q Consensus 302 G~I~IWDl~s~~~l~tl-----~gh~~~VtslafSpdG~-~Lasgs~DG-I~IWDl~tg-------------------k~ 355 (845)
|.|++||+++++++..+ .+|...|++++|+|+++ +|++++.|+ |++||+.++ +.
T Consensus 234 g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~ 313 (357)
T 3i2n_A 234 GKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSL 313 (357)
T ss_dssp TEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEE
T ss_pred CeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccce
Confidence 99999999876554433 48999999999999999 899999999 999999864 35
Q ss_pred EEEecCCCCCeEEEEEc-CCceEEE-E-----EEEEeeCC
Q psy467 356 YDAQPMGWGKVQDLAVT-GTQLWFR-R-----VGTWSHQD 388 (845)
Q Consensus 356 l~tl~~h~~~VtsVafS-dg~lLaa-S-----VsiW~~d~ 388 (845)
+..+.+|...|++++|+ ++++|++ + |.+|.+..
T Consensus 314 ~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 314 LQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred eeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 67888999999999999 8888873 4 99997653
No 43
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.6e-32 Score=305.76 Aligned_cols=251 Identities=21% Similarity=0.413 Sum_probs=210.9
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l 96 (845)
.|.+++|+| +|++||+|+.|+.|+|||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+.+++....+
T Consensus 125 ~v~~v~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 125 YIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp BEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred eEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE
Confidence 499999999 9999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred cCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEE-------cCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 97 NGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTY-------RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 97 ~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~-------~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
. +...+.+++|+| ++++|++|+.||.|++||++++..+..+ .+|...|.+++|+|++++|++++.|+.|++
T Consensus 204 ~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~ 282 (393)
T 1erj_A 204 S-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKL 282 (393)
T ss_dssp E-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred E-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 7 566799999999 8999999999999999999999888776 568899999999999999999999999999
Q ss_pred eeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
||+.+........ ....+.....+.+|..
T Consensus 283 -------------wd~~~~~~~~~~~--------~~~~~~~~~~~~~h~~------------------------------ 311 (393)
T 1erj_A 283 -------------WNLQNANNKSDSK--------TPNSGTCEVTYIGHKD------------------------------ 311 (393)
T ss_dssp -------------EEC-----------------------CEEEEEECCSS------------------------------
T ss_pred -------------EECCCCCCccccc--------CCCCCcceEEEecccC------------------------------
Confidence 9998655411000 0001111222233332
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEE
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vtsl 328 (845)
.|.+++|+|++. +|++|+.|+.|++||+.+++++..+.+|...|.++
T Consensus 312 ----------------------------~v~~~~~~~~~~-----~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v 358 (393)
T 1erj_A 312 ----------------------------FVLSVATTQNDE-----YILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV 358 (393)
T ss_dssp ----------------------------CEEEEEECGGGC-----EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred ----------------------------cEEEEEECCCCC-----EEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEE
Confidence 345556666655 99999999999999999999999999999999999
Q ss_pred EEeC------CCCEEEEEeCCC-EEEEEecCC
Q psy467 329 TFSE------GGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 329 afSp------dG~~Lasgs~DG-I~IWDl~tg 353 (845)
+|++ ++.+|++|+.|+ |+||++...
T Consensus 359 ~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 359 AVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 9986 688999999999 999998653
No 44
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.1e-32 Score=292.29 Aligned_cols=255 Identities=21% Similarity=0.404 Sum_probs=226.1
Q ss_pred cceeeee------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 2 RAKVEKA------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 2 ~irlw~l------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
.+++|.+ +.+.+|...|.+++|+| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++
T Consensus 46 ~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 124 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 124 (312)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEE
T ss_pred eEEEEeCCCcccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 3677763 67889999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred EECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc-CCCCCeEEEEEecCC
Q psy467 76 GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR-GHSKSINSIRFSPDG 154 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~-~h~~~V~sLafSPdg 154 (845)
|+.|+.|++||+++++.+..+..|...|.+++|+|++++|++++.||.|++||+++++.+..+. .+...+.+++|+|++
T Consensus 125 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (312)
T 4ery_A 125 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 204 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTS
T ss_pred EeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999999998887764 456789999999999
Q ss_pred CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
++|++++.|+.|++ ||+.+++. +..+.+|... ...
T Consensus 205 ~~l~~~~~d~~i~i-------------wd~~~~~~--------------------~~~~~~~~~~-------~~~----- 239 (312)
T 4ery_A 205 KYILAATLDNTLKL-------------WDYSKGKC--------------------LKTYTGHKNE-------KYC----- 239 (312)
T ss_dssp SEEEEEETTTEEEE-------------EETTTTEE--------------------EEEECSSCCS-------SSC-----
T ss_pred CEEEEEcCCCeEEE-------------EECCCCcE--------------------EEEEEecCCc-------eEE-----
Confidence 99999999999999 99998877 5666555433 100
Q ss_pred cccccccchhhhhhccCCCceeEEE-cCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIF-QPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS 313 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~f-spdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~ 313 (845)
....+ .+++. +|++|+.||.|++||+.+++
T Consensus 240 --------------------~~~~~~~~~~~-----------------------------~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 240 --------------------IFANFSVTGGK-----------------------------WIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp --------------------CCEEEECSSSC-----------------------------EEEECCTTSCEEEEETTTCC
T ss_pred --------------------EEEEEEeCCCc-----------------------------EEEEECCCCEEEEEECCCch
Confidence 11122 23344 89999999999999999999
Q ss_pred EEEEecCCCCCEEEEEEeCCCCEEEEEe--CCC-EEEEEec
Q psy467 314 LVSTTEKNSSTIRRLTFSEGGECLLGGD--TEG-LKVYGWE 351 (845)
Q Consensus 314 ~l~tl~gh~~~VtslafSpdG~~Lasgs--~DG-I~IWDl~ 351 (845)
.+..+.+|...|.+++|+|++.+|++++ .|+ |++|+.+
T Consensus 271 ~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 271 IVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred hhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 9999999999999999999999999997 578 9999864
No 45
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-34 Score=317.61 Aligned_cols=290 Identities=17% Similarity=0.234 Sum_probs=243.1
Q ss_pred cceeeeeEE--------eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC----CeeEEEecCCCCCeEEEEEcCC
Q psy467 2 RAKVEKAED--------FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK----SNCIMSLSGHSTPVESVQFGNG 69 (845)
Q Consensus 2 ~irlw~l~~--------L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t----~~~i~~l~~h~~~V~sLafSpd 69 (845)
.+++|++.. ...|...|++++|+| ++++|++|+.||.|++|++.+ .+.+..+.+|...|.+++|+|+
T Consensus 46 ~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 124 (416)
T 2pm9_A 46 SLELWSLLAADSEKPIASLQVDSKFNDLDWSH-NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAK 124 (416)
T ss_dssp CCEEEESSSGGGCSCSCCCCCSSCEEEEEECS-SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSS
T ss_pred eEEEEEccCCCCCcEEEEEecCCceEEEEECC-CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCC
Confidence 367887542 235889999999999 999999999999999999987 4588889999999999999998
Q ss_pred -CCEEEEEECCCcEEEEECCCCc------EEEE---EcCCCCCeEEEEEccC-CCEEEEEECCCeEEEEECCCCceEEEE
Q psy467 70 -EETLSAGCQSGSIKIWNLAVPT------VQRT---LNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTY 138 (845)
Q Consensus 70 -g~~LaSgs~DGtV~VWDl~tg~------~v~~---l~~h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~t~~~l~~~ 138 (845)
+++|++++.||.|++||+.+++ .... +..|...|.+++|+|+ +.+|++++.||.|++||+++++.+..+
T Consensus 125 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 204 (416)
T 2pm9_A 125 QDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHL 204 (416)
T ss_dssp STTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEE
Confidence 8999999999999999999876 3333 3568899999999999 789999999999999999999999888
Q ss_pred cCC------CCCeEEEEEecCC-CEEEEEeCCC---cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC
Q psy467 139 RGH------SKSINSIRFSPDG-QWIASGGEDG---VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS 208 (845)
Q Consensus 139 ~~h------~~~V~sLafSPdg-~~Lasgs~DG---~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~ 208 (845)
..+ ...|.+++|+|++ .++++++.|+ .|++ ||++++...
T Consensus 205 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~-------------~d~~~~~~~------------------ 253 (416)
T 2pm9_A 205 SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILI-------------WDLRNANTP------------------ 253 (416)
T ss_dssp CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCE-------------EETTSTTSC------------------
T ss_pred eccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEE-------------EeCCCCCCC------------------
Confidence 876 7889999999997 6899999998 9999 999876320
Q ss_pred eEEEEe-cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcC-CCCcCCCCcccccccCceeEEEcCC
Q psy467 209 LRKSFT-KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQP-HRSLNRSGTCVPVSVSRTSLSILPQ 286 (845)
Q Consensus 209 ~l~~~~-~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fsp-dg~~~~~~~~~~~~~~I~slafSPd 286 (845)
+..+. +|... + ..++|+| ++.
T Consensus 254 -~~~~~~~~~~~-------v---------------------------~~~~~s~~~~~---------------------- 276 (416)
T 2pm9_A 254 -LQTLNQGHQKG-------I---------------------------LSLDWCHQDEH---------------------- 276 (416)
T ss_dssp -SBCCCSCCSSC-------E---------------------------EEEEECSSCSS----------------------
T ss_pred -cEEeecCccCc-------e---------------------------eEEEeCCCCCC----------------------
Confidence 22222 33333 3 4555555 444
Q ss_pred CCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCC-CEEEEEeCCC-EEEEEecCCceEEEec----
Q psy467 287 SPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG-ECLLGGDTEG-LKVYGWEPARQYDAQP---- 360 (845)
Q Consensus 287 g~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG-~~Lasgs~DG-I~IWDl~tgk~l~tl~---- 360 (845)
+|++++.||.|++||+.+++++..+.+|...|++++|+|++ .+|++++.|+ |+||++.++.......
T Consensus 277 -------~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~ 349 (416)
T 2pm9_A 277 -------LLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETET 349 (416)
T ss_dssp -------CEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-----
T ss_pred -------eEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccc
Confidence 89999999999999999999999999999999999999999 8999999999 9999998765332211
Q ss_pred -------------------------------CCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 361 -------------------------------MGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 361 -------------------------------~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
.|...+++++|+ +|++|+++ |.+|.+.
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 350 KQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp -----------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred cccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 156778899999 99999887 8888764
No 46
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.3e-32 Score=296.09 Aligned_cols=254 Identities=20% Similarity=0.287 Sum_probs=210.9
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC--CeeEEEecCCCCCeEEEEEcC--CCCEEEEEECCCcEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK--SNCIMSLSGHSTPVESVQFGN--GEETLSAGCQSGSIKI 84 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t--~~~i~~l~~h~~~V~sLafSp--dg~~LaSgs~DGtV~V 84 (845)
..+.+|.+.|++++|+| +|++||+|+.|++|+||++.+ .+.+..+.+|...|.+++|++ ++++|++|+.|++|++
T Consensus 3 ~~~~~h~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp EECCSCSSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eeccCCcCceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 46789999999999999 999999999999999999964 467889999999999999986 3899999999999999
Q ss_pred EECCCCc--EEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeEEEEECCCCc--eEEEEcCCCCCeEEEEEecC-----
Q psy467 85 WNLAVPT--VQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKG--CIYTYRGHSKSINSIRFSPD----- 153 (845)
Q Consensus 85 WDl~tg~--~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~~--~l~~~~~h~~~V~sLafSPd----- 153 (845)
||+.+++ .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+.+|...|.+++|+|+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence 9999874 56677889999999999997 8899999999999999998753 24567789999999999997
Q ss_pred --------CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 154 --------GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 154 --------g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
+++|++|+.|+.|++ ||++++... ......+.+|...
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~l-------------wd~~~~~~~----------------~~~~~~l~~H~~~------ 206 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKI-------------WKYNSDAQT----------------YVLESTLEGHSDW------ 206 (297)
T ss_dssp --------CCEEEEEETTSCEEE-------------EEEETTTTE----------------EEEEEEECCCSSC------
T ss_pred ccCCCCCCcceEEEEcCCCcEEE-------------EEEcCCCce----------------EEEEEEecCCCCc------
Confidence 579999999999999 998765520 0013445555555
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
| .+++|+|++. .+. +|++++.|+.|+
T Consensus 207 -V---------------------------~~v~~sp~~~---------------------~~~-----~las~s~D~~v~ 232 (297)
T 2pm7_B 207 -V---------------------------RDVAWSPTVL---------------------LRS-----YMASVSQDRTCI 232 (297)
T ss_dssp -E---------------------------EEEEECCCCS---------------------SSE-----EEEEEETTSCEE
T ss_pred -e---------------------------EEEEECCCCC---------------------Cce-----EEEEEECCCcEE
Confidence 5 5556665531 012 899999999999
Q ss_pred EEECCCCe---EEEEe--cCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 306 FWDLEKFS---LVSTT--EKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 306 IWDl~s~~---~l~tl--~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
+||+++.. ....+ ..|...|.+++|+|+|++||+++.|+ |+||+...
T Consensus 233 iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 99997642 22334 46788999999999999999999999 99999874
No 47
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.1e-32 Score=300.31 Aligned_cols=252 Identities=23% Similarity=0.415 Sum_probs=209.3
Q ss_pred cceeeee-------------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcC
Q psy467 2 RAKVEKA-------------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN 68 (845)
Q Consensus 2 ~irlw~l-------------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSp 68 (845)
++++|++ +.+.+|...|.+++|+| ++.++++|+.|++|++||+.+++.+..+.+|...|.+++|+|
T Consensus 50 ~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp 128 (343)
T 2xzm_R 50 TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ-ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP 128 (343)
T ss_dssp CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS-STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECS
T ss_pred EEEEEECCcCCcccccccccchhccCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECC
Confidence 4678875 46889999999999999 999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEEEEc---CCCCCeEEEEEccCC----------CEEEEEECCCeEEEEECCCCceE
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLN---GHKSSITSVDFHPYG----------DYLCSGSLDSFIKLWDLRRKGCI 135 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~~v~~l~---~h~~~V~~lafspdg----------~~Lasgs~DG~I~IWDl~t~~~l 135 (845)
++++|++++.|++|++||+.. ....... .|...|.+++|+|++ .+|++++.||.|++||. +....
T Consensus 129 ~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~ 206 (343)
T 2xzm_R 129 DNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIR 206 (343)
T ss_dssp STTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEE
T ss_pred CCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCcee
Confidence 999999999999999999984 3343333 688899999999987 79999999999999994 56778
Q ss_pred EEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEec
Q psy467 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTK 215 (845)
Q Consensus 136 ~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~ 215 (845)
..+.+|...|.+++|+|+|++|++|+.||.|++ ||+...... ...+.
T Consensus 207 ~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~i-------------wd~~~~~~~-------------------~~~~~- 253 (343)
T 2xzm_R 207 YTFKAHESNVNHLSISPNGKYIATGGKDKKLLI-------------WDILNLTYP-------------------QREFD- 253 (343)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTCEEEE-------------EESSCCSSC-------------------SEEEE-
T ss_pred EEEcCccccceEEEECCCCCEEEEEcCCCeEEE-------------EECCCCccc-------------------ceeec-
Confidence 888999999999999999999999999999999 998543320 11111
Q ss_pred CCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE
Q psy467 216 GRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT 295 (845)
Q Consensus 216 h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL 295 (845)
+.. .|.+++|+|++. ++
T Consensus 254 ~~~----------------------------------------------------------~v~~v~~sp~~~-----~l 270 (343)
T 2xzm_R 254 AGS----------------------------------------------------------TINQIAFNPKLQ-----WV 270 (343)
T ss_dssp CSS----------------------------------------------------------CEEEEEECSSSC-----EE
T ss_pred CCC----------------------------------------------------------cEEEEEECCCCC-----EE
Confidence 111 234444555444 66
Q ss_pred EEEeCCCeEEEEECCCCeEEE--Eec-----------CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 296 TSSSADRTVNFWDLEKFSLVS--TTE-----------KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 296 atgs~DG~I~IWDl~s~~~l~--tl~-----------gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
+++ .|+.|++||+.+++... .+. +|...|++++|+|+|++|++|+.|| |++|+++++
T Consensus 271 a~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 271 AVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp EEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred EEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 655 58889999998765432 443 6788899999999999999999999 999998765
No 48
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2e-32 Score=293.28 Aligned_cols=260 Identities=15% Similarity=0.234 Sum_probs=216.0
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC----eeEEEecCCCCCeEEEEEcC--CCCEEEEEECCCcE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS----NCIMSLSGHSTPVESVQFGN--GEETLSAGCQSGSI 82 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~----~~i~~l~~h~~~V~sLafSp--dg~~LaSgs~DGtV 82 (845)
+.+.+|.+.|++++|+| ++++||+|+.||.|++||+.++ +....+.+|...|.+++|+| ++++|++++.||.|
T Consensus 5 ~~~~gH~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CEECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccCcccccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 45789999999999999 9999999999999999999876 46777889999999999999 69999999999999
Q ss_pred EEEECCCC---------cEEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeEEEEECCCCceEEEEc------------
Q psy467 83 KIWNLAVP---------TVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGCIYTYR------------ 139 (845)
Q Consensus 83 ~VWDl~tg---------~~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~~~l~~~~------------ 139 (845)
++||+.++ +.+..+..|...|.+++|+|+ +++|++++.||.|++||+++++.+..+.
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 99999987 567888899999999999999 9999999999999999998876543332
Q ss_pred -CCCCCeEEEEEecC---CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEec
Q psy467 140 -GHSKSINSIRFSPD---GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTK 215 (845)
Q Consensus 140 -~h~~~V~sLafSPd---g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~ 215 (845)
.+...+.+++|+|+ +.++++++.|+.+.+ |+...+.. ..+..+.+
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~-------------~~~~~~~~------------------~~~~~~~~ 212 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIY-------------QRGKDGKL------------------HVAAKLPG 212 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEE-------------EECTTSCE------------------EEEEECCC
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEE-------------EccCCCce------------------eeeeecCC
Confidence 57788999999997 899999999999977 77665443 01233333
Q ss_pred CCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE
Q psy467 216 GRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT 295 (845)
Q Consensus 216 h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL 295 (845)
|... | .+++|+|++.. .++ +|
T Consensus 213 h~~~-------i---------------------------~~~~~~p~~~~--------------------~~~-----~l 233 (351)
T 3f3f_A 213 HKSL-------I---------------------------RSISWAPSIGR--------------------WYQ-----LI 233 (351)
T ss_dssp CCSC-------E---------------------------EEEEECCCSSC--------------------SSE-----EE
T ss_pred CCcc-------e---------------------------eEEEECCCCCC--------------------cce-----EE
Confidence 4333 3 44555555410 003 89
Q ss_pred EEEeCCCeEEEEECCCC----------------------------------------------eEEEEecCCCCCEEEEE
Q psy467 296 TSSSADRTVNFWDLEKF----------------------------------------------SLVSTTEKNSSTIRRLT 329 (845)
Q Consensus 296 atgs~DG~I~IWDl~s~----------------------------------------------~~l~tl~gh~~~Vtsla 329 (845)
++|+.||.|++||++.+ +++..+.+|...|++++
T Consensus 234 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 313 (351)
T 3f3f_A 234 ATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVS 313 (351)
T ss_dssp EEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEE
T ss_pred EEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEE
Confidence 99999999999998764 67788889999999999
Q ss_pred EeCCCCEEEEEeCCC-EEEEEecCCceEEEe
Q psy467 330 FSEGGECLLGGDTEG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 330 fSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl 359 (845)
|+|+|++|++++.|| |+||++.+++.+..+
T Consensus 314 ~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 314 WNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp ECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred EcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 999999999999999 999999988655443
No 49
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-32 Score=297.17 Aligned_cols=262 Identities=19% Similarity=0.299 Sum_probs=204.0
Q ss_pred cceeeeeE--------Ee-cc-CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC-------CCeeEEEecCCCCCeEEE
Q psy467 2 RAKVEKAE--------DF-MA-HGASVNCLALGKKSGQVLATGGDDKKVNLWALG-------KSNCIMSLSGHSTPVESV 64 (845)
Q Consensus 2 ~irlw~l~--------~L-~g-H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~-------t~~~i~~l~~h~~~V~sL 64 (845)
++++|++. .+ .+ |.+.|.+++|+| ++++||+|+.|++|+||++. ..+.+..+.+|...|.++
T Consensus 35 ~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v 113 (330)
T 2hes_X 35 KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRP-HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGV 113 (330)
T ss_dssp CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECT-TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEE
T ss_pred EEEEEEecCCCeEEEEEEecCCccCCEEEEEECC-CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEE
Confidence 46777642 34 34 999999999999 89999999999999999984 345677889999999999
Q ss_pred EEcCCCCEEEEEECCCcEEEEECCC----CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC--ceEEEE
Q psy467 65 QFGNGEETLSAGCQSGSIKIWNLAV----PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK--GCIYTY 138 (845)
Q Consensus 65 afSpdg~~LaSgs~DGtV~VWDl~t----g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~--~~l~~~ 138 (845)
+|+|++++|++|+.|++|++||+.. .+++..+.+|...|.+++|+|++++|++++.|++|++||..++ +++..+
T Consensus 114 ~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~ 193 (330)
T 2hes_X 114 AWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVL 193 (330)
T ss_dssp EECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred EECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEc
Confidence 9999999999999999999999943 2567788999999999999999999999999999999999766 678889
Q ss_pred cCCCCCeEEEEEecC--CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecC
Q psy467 139 RGHSKSINSIRFSPD--GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKG 216 (845)
Q Consensus 139 ~~h~~~V~sLafSPd--g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h 216 (845)
.+|...|.+++|+|+ +.+|++++.|+.|++ ||+..+.... . ..
T Consensus 194 ~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~i-------------w~~~~~~~~~----------------~--~~---- 238 (330)
T 2hes_X 194 NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRV-------------WKYMGDDEDD----------------Q--QE---- 238 (330)
T ss_dssp CCCSSCEEEEEECCSSSSCEEEEEETTSCEEE-------------EEEEEECTTS----------------C--EE----
T ss_pred cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEE-------------EEecCCCccc----------------c--ce----
Confidence 999999999999998 778999999999999 9976443200 0 00
Q ss_pred CCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE
Q psy467 217 RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT 296 (845)
Q Consensus 217 ~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa 296 (845)
. ......+. .+...|.+++|++++ +|+
T Consensus 239 ----------~---------------------------~~~~~~~~----------~h~~~v~~v~~s~~~------~l~ 265 (330)
T 2hes_X 239 ----------W---------------------------VCEAILPD----------VHKRQVYNVAWGFNG------LIA 265 (330)
T ss_dssp ----------E---------------------------EEEEECCS----------CCSSCEEEEEECTTS------CEE
T ss_pred ----------e---------------------------EEeeeccc----------ccccceEEEEEcCCC------EEE
Confidence 0 00000010 012346666676544 689
Q ss_pred EEeCCCeEEEEECCCCe--EEEE-ecCCCC-CEEEEEEeC--CCCEEEEEeCCC-EEEEEecC
Q psy467 297 SSSADRTVNFWDLEKFS--LVST-TEKNSS-TIRRLTFSE--GGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 297 tgs~DG~I~IWDl~s~~--~l~t-l~gh~~-~VtslafSp--dG~~Lasgs~DG-I~IWDl~t 352 (845)
+++.||.|++||..+++ .+.. +.+|.. .|++++|+| ++++||+|+.|+ |+||+++.
T Consensus 266 s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 266 SVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 99999999999998774 3333 357876 899999999 799999999999 99999865
No 50
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6e-33 Score=309.51 Aligned_cols=263 Identities=25% Similarity=0.403 Sum_probs=225.7
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe-------eEEEecCCCCCeEEEEEcC
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN-------CIMSLSGHSTPVESVQFGN 68 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~-------~i~~l~~h~~~V~sLafSp 68 (845)
++++|+ .+.+.+|...|.+++|+| ++++||+|+.|+.|++|++.+.. ....+.+|...|.++.|+|
T Consensus 89 ~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~-~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~ 167 (380)
T 3iz6_a 89 RLIVWNALTSQKTHAIKLHCPWVMECAFAP-NGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVP 167 (380)
T ss_dssp EEEEEETTTTEEEEEEECCCTTCCCCEECT-TSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCS
T ss_pred eEEEEECCCCccceEEecCCCCEEEEEECC-CCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEec
Confidence 478887 467899999999999999 99999999999999999986432 3456789999999999999
Q ss_pred C-CCEEEEEECCCcEEEEECCCCcEEEEE-----cCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECC-CCceEEEEcC
Q psy467 69 G-EETLSAGCQSGSIKIWNLAVPTVQRTL-----NGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLR-RKGCIYTYRG 140 (845)
Q Consensus 69 d-g~~LaSgs~DGtV~VWDl~tg~~v~~l-----~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~-t~~~l~~~~~ 140 (845)
+ +..|++|+.|++|++||+.+++.+..+ .+|...|.+++|++ ++++|++|+.||.|++||++ .+..+..+.+
T Consensus 168 ~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~ 247 (380)
T 3iz6_a 168 DQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG 247 (380)
T ss_dssp SSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC
T ss_pred CCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC
Confidence 6 457999999999999999999998887 57899999999987 78999999999999999997 4578889999
Q ss_pred CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCC
Q psy467 141 HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 141 h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~ 220 (845)
|...|.+++|+|++++|++++.||.|++ ||+++++. +..+..+...
T Consensus 248 h~~~v~~v~~~p~~~~l~s~s~D~~i~l-------------wd~~~~~~--------------------~~~~~~~~~~- 293 (380)
T 3iz6_a 248 HEGDINSVKFFPDGQRFGTGSDDGTCRL-------------FDMRTGHQ--------------------LQVYNREPDR- 293 (380)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSCEEE-------------EETTTTEE--------------------EEEECCCCSS-
T ss_pred cCCCeEEEEEecCCCeEEEEcCCCeEEE-------------EECCCCcE--------------------EEEecccccc-
Confidence 9999999999999999999999999999 99998877 4444332211
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA 300 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~ 300 (845)
. ......+++++|+|+|+ +|++|+.
T Consensus 294 ------~--------------------------------------------~~~~~~v~~~~~s~~g~-----~l~~g~~ 318 (380)
T 3iz6_a 294 ------N--------------------------------------------DNELPIVTSVAFSISGR-----LLFAGYS 318 (380)
T ss_dssp ------S--------------------------------------------CCSSCSCSEEEECSSSS-----EEEEECT
T ss_pred ------c--------------------------------------------ccccCceEEEEECCCCC-----EEEEEEC
Confidence 0 00112356667777776 9999999
Q ss_pred CCeEEEEECCCCeEEEEe----cCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc
Q psy467 301 DRTVNFWDLEKFSLVSTT----EKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 301 DG~I~IWDl~s~~~l~tl----~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk 354 (845)
||.|++||+.+++.+..+ .+|.+.|++++|+|+|++|++|+.|+ |+||++...+
T Consensus 319 dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 319 NGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp TSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred CCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 999999999999988877 67999999999999999999999999 9999987654
No 51
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.9e-31 Score=300.37 Aligned_cols=282 Identities=21% Similarity=0.348 Sum_probs=246.0
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEc--CCCCEE
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG--NGEETL 73 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafS--pdg~~L 73 (845)
++++|+ +..+.+|.+.|++++|++ ++ +|++|+.||+|++||+.+++.+..+.+|...|.+++|+ +++.+|
T Consensus 143 ~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~-~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l 220 (464)
T 3v7d_B 143 MIRVYDSINKKFLLQLSGHDGGVWALKYAH-GG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYI 220 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECS-TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEE
T ss_pred cEEEEECCCCcEEEEEeCCCcCEEEEEEcC-CC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEE
Confidence 467787 467899999999999998 55 99999999999999999999999999999999999998 578899
Q ss_pred EEEECCCcEEEEECCCCc-----------------------EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECC
Q psy467 74 SAGCQSGSIKIWNLAVPT-----------------------VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130 (845)
Q Consensus 74 aSgs~DGtV~VWDl~tg~-----------------------~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~ 130 (845)
++|+.||.|++||+.++. .+..+.+|...|.++ +++++++++++.||.|++||++
T Consensus 221 ~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~ 298 (464)
T 3v7d_B 221 VTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVA 298 (464)
T ss_dssp EEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETT
T ss_pred EEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECC
Confidence 999999999999998765 255677888888877 5778999999999999999999
Q ss_pred CCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeE
Q psy467 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLR 210 (845)
Q Consensus 131 t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l 210 (845)
+++++..+.+|...|.+++|+|+++++++++.||.|++ ||+.+++. +
T Consensus 299 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~v-------------wd~~~~~~--------------------~ 345 (464)
T 3v7d_B 299 QMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRI-------------WDLENGEL--------------------M 345 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEE-------------EETTTTEE--------------------E
T ss_pred CCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEE-------------EECCCCcE--------------------E
Confidence 99999999999999999999999999999999999999 99998887 7
Q ss_pred EEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcc
Q psy467 211 KSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPML 290 (845)
Q Consensus 211 ~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~ 290 (845)
..+.+|... + ..+.++ +.
T Consensus 346 ~~~~~h~~~-------v---------------------------~~~~~~--~~-------------------------- 363 (464)
T 3v7d_B 346 YTLQGHTAL-------V---------------------------GLLRLS--DK-------------------------- 363 (464)
T ss_dssp EEECCCSSC-------E---------------------------EEEEEC--SS--------------------------
T ss_pred EEEeCCCCc-------E---------------------------EEEEEc--CC--------------------------
Confidence 777777666 5 555555 34
Q ss_pred cceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEE-ecCCCCCeEE
Q psy467 291 CFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDA-QPMGWGKVQD 368 (845)
Q Consensus 291 ~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~t-l~~h~~~Vts 368 (845)
++++|+.||.|++||+.++....... |...+..++|++++++|++|+ |+ |++||+.+++.+.. +..|.+.|++
T Consensus 364 ---~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~ 438 (464)
T 3v7d_B 364 ---FLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWS 438 (464)
T ss_dssp ---EEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEE
T ss_pred ---EEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEE
Confidence 89999999999999999988766664 567788999999999999999 67 99999999999876 6778899999
Q ss_pred EEEcCCceEEEE-----EEEEeeC
Q psy467 369 LAVTGTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 369 VafSdg~lLaaS-----VsiW~~d 387 (845)
++|+++.+++++ +.+|..|
T Consensus 439 v~~~~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 439 VNFKGKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp EEEETTEEEEEEEETTEEEEEEEE
T ss_pred EEecCCEEEEEEEeCCeEEEEEee
Confidence 999966666665 4555544
No 52
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.3e-32 Score=302.92 Aligned_cols=247 Identities=19% Similarity=0.240 Sum_probs=205.3
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE----EEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI----MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i----~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
...+|.+.|++++|+| ++. +++++.||+|+|||+.+++.. ....+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 89 ~~~~~~~~V~~~~~s~-d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVS-EKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp EEEECSSCEEEEEEET-TTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred ccCCCCCCEEEEEEcC-CCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 3457999999999999 665 556788999999999887654 2345799999999999999999999999999999
Q ss_pred ECCCCcEEEEEcCCCCCeEEEEEccCCC-EEEEEECCCeEEEEECCCCceEEEEc--CCCCCeEEEEEecC-CCEEEEEe
Q psy467 86 NLAVPTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWDLRRKGCIYTYR--GHSKSINSIRFSPD-GQWIASGG 161 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~V~~lafspdg~-~Lasgs~DG~I~IWDl~t~~~l~~~~--~h~~~V~sLafSPd-g~~Lasgs 161 (845)
|+.+++.+..+.+|...|.+++|++++. ++++++.||.|++||+++++++..+. .+...+.+++|+|+ +.+|++|+
T Consensus 167 d~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 167 DLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee
Confidence 9999999999999999999999999874 78999999999999999888766543 46778999999997 56899999
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
.|+.|++ ||+++++. +..+.+|... |
T Consensus 247 ~d~~i~~-------------wd~~~~~~--------------------~~~~~~~~~~-------v-------------- 272 (357)
T 4g56_B 247 ETGNVSL-------------VNIKNPDS--------------------AQTSAVHSQN-------I-------------- 272 (357)
T ss_dssp SSSCEEE-------------EESSCGGG--------------------CEEECCCSSC-------E--------------
T ss_pred cccceeE-------------EECCCCcE--------------------eEEEecccee-------E--------------
Confidence 9999999 99998877 5666666655 5
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN 321 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh 321 (845)
.+++|+|++. + +|++|+.|+.|+|||+++++++..+ +|
T Consensus 273 -------------~~l~~sp~~~-----------------------~-----~lasgs~D~~i~iwd~~~~~~~~~~-~H 310 (357)
T 4g56_B 273 -------------TGLAYSYHSS-----------------------P-----FLASISEDCTVAVLDADFSEVFRDL-SH 310 (357)
T ss_dssp -------------EEEEECSSSS-----------------------C-----CEEEEETTSCEEEECTTSCEEEEEC-CC
T ss_pred -------------EEEEEcCCCC-----------------------C-----EEEEEeCCCEEEEEECCCCcEeEEC-CC
Confidence 5666666543 1 7999999999999999999887665 79
Q ss_pred CCCEEEEEEeC-CCCEEEEEeCCC-EEEEEecCCc
Q psy467 322 SSTIRRLTFSE-GGECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 322 ~~~VtslafSp-dG~~Lasgs~DG-I~IWDl~tgk 354 (845)
.+.|++++|+| ++++|++++.|+ |++|++.+..
T Consensus 311 ~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 311 RDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred CCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 99999999998 899999999999 9999997643
No 53
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-32 Score=306.59 Aligned_cols=284 Identities=13% Similarity=0.185 Sum_probs=234.0
Q ss_pred eEEe-ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC---Ce---eEEEecCCCCCeEEEEEcCCCCEEEEEECCC
Q psy467 8 AEDF-MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK---SN---CIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80 (845)
Q Consensus 8 l~~L-~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t---~~---~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG 80 (845)
+.++ .+|.+.|++++|+|.++++||+|+.||+|+|||+.+ +. ....+ +|...|.+++|+|++++|++|+.||
T Consensus 55 ~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg 133 (437)
T 3gre_A 55 IATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDG 133 (437)
T ss_dssp EEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTS
T ss_pred EeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 5677 899999999999986789999999999999999865 33 23333 4999999999999999999999999
Q ss_pred cEEEEECC---CCcEEEEEcC------------CCCCeEEEE--EccCCCEEEEEECCCeEEEEECCCCceEEEEcC--C
Q psy467 81 SIKIWNLA---VPTVQRTLNG------------HKSSITSVD--FHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG--H 141 (845)
Q Consensus 81 tV~VWDl~---tg~~v~~l~~------------h~~~V~~la--fspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~--h 141 (845)
.|++||+. +++....+.. +...+.++. +++++.+|++++.||.|++||+++++++..+.. |
T Consensus 134 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h 213 (437)
T 3gre_A 134 QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPR 213 (437)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGG
T ss_pred EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCC
Confidence 99999995 5554443321 455667776 557899999999999999999999999999988 8
Q ss_pred CCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe-cCCCCC
Q psy467 142 SKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT-KGRPGG 220 (845)
Q Consensus 142 ~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~-~h~~~~ 220 (845)
...|.+++|+|++++|++|+.||.|++ ||+++++. +..+. .|...
T Consensus 214 ~~~v~~~~~s~~~~~l~s~~~dg~i~i-------------wd~~~~~~--------------------~~~~~~~~~~~- 259 (437)
T 3gre_A 214 HGAVSSICIDEECCVLILGTTRGIIDI-------------WDIRFNVL--------------------IRSWSFGDHAP- 259 (437)
T ss_dssp GCCEEEEEECTTSCEEEEEETTSCEEE-------------EETTTTEE--------------------EEEEBCTTCEE-
T ss_pred CCceEEEEECCCCCEEEEEcCCCeEEE-------------EEcCCccE--------------------EEEEecCCCCc-
Confidence 899999999999999999999999999 99998776 55543 33323
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA 300 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~ 300 (845)
| .+++|+|. |++++. +|++|+.
T Consensus 260 ------v---------------------------~~~~~~~~--------------------~s~~~~-----~l~s~~~ 281 (437)
T 3gre_A 260 ------I---------------------------THVEVCQF--------------------YGKNSV-----IVVGGSS 281 (437)
T ss_dssp ------E---------------------------EEEEECTT--------------------TCTTEE-----EEEEEST
T ss_pred ------e---------------------------EEEEeccc--------------------cCCCcc-----EEEEEcC
Confidence 4 55655543 234555 8999999
Q ss_pred CCeEEEEECCCCeEEEEecCC--------------------------CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 301 DRTVNFWDLEKFSLVSTTEKN--------------------------SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 301 DG~I~IWDl~s~~~l~tl~gh--------------------------~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
||.|++||+.+++++..+.+| ...|++++|+ ++++|++|+.|+ |++||+.++
T Consensus 282 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 282 KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp TEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCG
T ss_pred CCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCc
Confidence 999999999999998888754 4458889999 789999999999 999999998
Q ss_pred ceEEEecC-------------------------------------CCCCeEEEEEc-C--CceEEEE-----EEEEe
Q psy467 354 RQYDAQPM-------------------------------------GWGKVQDLAVT-G--TQLWFRR-----VGTWS 385 (845)
Q Consensus 354 k~l~tl~~-------------------------------------h~~~VtsVafS-d--g~lLaaS-----VsiW~ 385 (845)
+++..+.+ |.+.|++++|+ + +.+|+++ |.+|.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 361 SSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp GGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 87777665 78899999999 5 5667666 88884
No 54
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-32 Score=334.46 Aligned_cols=366 Identities=11% Similarity=0.071 Sum_probs=258.7
Q ss_pred cceeeeeE-----EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEE
Q psy467 2 RAKVEKAE-----DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAG 76 (845)
Q Consensus 2 ~irlw~l~-----~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSg 76 (845)
++++|... ....|...|.+++|+| +++|++++.|++|+|||+.+++.+..+. |...|++++|+|++++|++|
T Consensus 40 ~I~lw~~~~~~~~~~~~~~~~V~~l~fsp--g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sg 116 (902)
T 2oaj_A 40 EVHIYGQQQVEVVIKLEDRSAIKEMRFVK--GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIG 116 (902)
T ss_dssp EEEEECSTTCEEEEECSSCCCEEEEEEET--TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEE
T ss_pred EEEEEeCCCcEEEEEcCCCCCEEEEEEcC--CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEE
Confidence 46777632 2335888999999999 6699999999999999999999998887 77899999999999999999
Q ss_pred ECCCcEEEEECCCCcEE-----------EEEcCCCCCeEEEEEccC-CCEEEEEECCCeEEEEECCCCceEEEEcCC---
Q psy467 77 CQSGSIKIWNLAVPTVQ-----------RTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGH--- 141 (845)
Q Consensus 77 s~DGtV~VWDl~tg~~v-----------~~l~~h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~t~~~l~~~~~h--- 141 (845)
+.||.|++||+.+++.. ..+.+|.+.|.+++|+|+ +..|++|+.||.| +||+++++++..+..|
T Consensus 117 s~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~ 195 (902)
T 2oaj_A 117 LQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPP 195 (902)
T ss_dssp ETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCT
T ss_pred cCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCC
Confidence 99999999999988754 223568899999999996 4789999999999 9999999998888755
Q ss_pred ---------------CCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCC--C-----------
Q psy467 142 ---------------SKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT--P----------- 193 (845)
Q Consensus 142 ---------------~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~--~----------- 193 (845)
...|.+++|+|+|++|++++.||.|++ ||+++++.+.. +
T Consensus 196 g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~l-------------Wd~~~g~~~~~r~l~~~~~~~~~~~ 262 (902)
T 2oaj_A 196 FAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVF-------------WDANSGHMIMARTVFETEINVPQPD 262 (902)
T ss_dssp TCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEE-------------EETTTCCEEEEECSSCSCTTSCCTT
T ss_pred cCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEE-------------EECCCCcEEEEEeecccccCCCCCc
Confidence 467999999999999999999999999 99988775421 1
Q ss_pred -------CCCCCcceeecC----CCCeEEEEecCCCCCccceeeEeeeccc-----------------------------
Q psy467 194 -------PPQYTSSVPFSH----NTSLRKSFTKGRPGGTKAKIDVTRIEEN----------------------------- 233 (845)
Q Consensus 194 -------~~~~i~svs~sp----dg~~l~~~~~h~~~~~~~~i~V~~i~~~----------------------------- 233 (845)
....+..++|++ ++..+....+.........+.++.+...
T Consensus 263 ~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 342 (902)
T 2oaj_A 263 YIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTN 342 (902)
T ss_dssp CCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSS
T ss_pred CCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCC
Confidence 122477888854 3322222222211100011112221100
Q ss_pred ccccc------------------------cccchhhhhhc-----------------cCCCceeEEEcCCCC--c-----
Q psy467 234 AESED------------------------QAGEEELFATI-----------------ANPCDYSAIFQPHRS--L----- 265 (845)
Q Consensus 234 ~~~~~------------------------~~~~~~l~~~~-----------------~~~~~~~l~fspdg~--~----- 265 (845)
....+ .++...+|... ..+.+.++++++... |
T Consensus 343 ~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~ 422 (902)
T 2oaj_A 343 VPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALS 422 (902)
T ss_dssp SCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHH
T ss_pred CceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHh
Confidence 00000 00000000000 000111112211000 0
Q ss_pred ---CCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE----EE--ec-----CCCCCEEEEEEe
Q psy467 266 ---NRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV----ST--TE-----KNSSTIRRLTFS 331 (845)
Q Consensus 266 ---~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l----~t--l~-----gh~~~VtslafS 331 (845)
........+...+..++|+|+++ +|++|+.|++|++||+.++... .. +. +|...|++++|+
T Consensus 423 ~~~~~~~~l~G~~~~v~sv~~spdg~-----~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafs 497 (902)
T 2oaj_A 423 AAQNKDYLLKGGVRTKRQKLPAEYGT-----AFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFA 497 (902)
T ss_dssp TTBCCCCSCCCSBCCCCCCCCCSEEE-----EEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEE
T ss_pred cccCCCCcccCCcCCCCcccccccCc-----EEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEec
Confidence 00000111233455678889998 9999999999999999876421 11 22 788999999999
Q ss_pred CCCCEEEEEeCCC-EEEEEecCCc---------------------------------------------eEEEecCCCCC
Q psy467 332 EGGECLLGGDTEG-LKVYGWEPAR---------------------------------------------QYDAQPMGWGK 365 (845)
Q Consensus 332 pdG~~Lasgs~DG-I~IWDl~tgk---------------------------------------------~l~tl~~h~~~ 365 (845)
|||++||+|+.|+ |+||++.+++ ++..+.+|.+.
T Consensus 498 pdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~ 577 (902)
T 2oaj_A 498 AETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGK 577 (902)
T ss_dssp TTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCS
T ss_pred CCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCc
Confidence 9999999999999 9999998762 46778899999
Q ss_pred eEEEEEc-CCceEEEE-----EEEEeeCCCC
Q psy467 366 VQDLAVT-GTQLWFRR-----VGTWSHQDSG 390 (845)
Q Consensus 366 VtsVafS-dg~lLaaS-----VsiW~~d~~~ 390 (845)
|++++|| || +||++ |.+|.++...
T Consensus 578 V~svafSpdG-~lAsgs~D~tv~lwd~~~~~ 607 (902)
T 2oaj_A 578 TSAINNSNIG-FVGIAYAAGSLMLIDRRGPA 607 (902)
T ss_dssp EEEEEECBTS-EEEEEETTSEEEEEETTTTE
T ss_pred EEEEEecCCc-EEEEEeCCCcEEEEECCCCe
Confidence 9999999 88 88877 9999876543
No 55
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.5e-32 Score=302.14 Aligned_cols=288 Identities=16% Similarity=0.189 Sum_probs=234.2
Q ss_pred ceeeeeEE------eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEE
Q psy467 3 AKVEKAED------FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAG 76 (845)
Q Consensus 3 irlw~l~~------L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSg 76 (845)
+++|++.. +.+| ..+....|++ ++++||+|+.||.|++||+.+++....+.+|...|.+++|+|++++|++|
T Consensus 80 v~i~d~~~~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 157 (420)
T 3vl1_A 80 DFLFNTIIRDGSKMLKRA-DYTAVDTAKL-QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISS 157 (420)
T ss_dssp EEEEECCSEETTTTSCSC-CEEEEEEECS-SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEE
T ss_pred EEEEEecccceeeEEecC-CceEEEEEec-CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEE
Confidence 56777542 3344 4445556777 99999999999999999999999998889999999999999999999999
Q ss_pred ECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC---CCCCeEE------
Q psy467 77 CQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG---HSKSINS------ 147 (845)
Q Consensus 77 s~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~---h~~~V~s------ 147 (845)
+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+++++.+..+.. +...+.+
T Consensus 158 s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 237 (420)
T 3vl1_A 158 SQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVG 237 (420)
T ss_dssp ETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEEC
T ss_pred eCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999988874 3344444
Q ss_pred ---------------EEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEE
Q psy467 148 ---------------IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKS 212 (845)
Q Consensus 148 ---------------LafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~ 212 (845)
++|+|++++|++++.||.|++ ||+++++. +..
T Consensus 238 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i-------------~d~~~~~~--------------------~~~ 284 (420)
T 3vl1_A 238 TDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITV-------------HNVFSKEQ--------------------TIQ 284 (420)
T ss_dssp CCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEE-------------EETTTCCE--------------------EEE
T ss_pred CcceeeecccCcccceEEcCCCCEEEEEcCCCeEEE-------------EECCCCce--------------------eEE
Confidence 455788999999999999999 99987766 333
Q ss_pred Ee-cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCccc
Q psy467 213 FT-KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLC 291 (845)
Q Consensus 213 ~~-~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~ 291 (845)
+. .|.. .+.+++|+|+++.
T Consensus 285 ~~~~~~~----------------------------------------------------------~v~~~~~~~~~~~-- 304 (420)
T 3vl1_A 285 LPSKFTC----------------------------------------------------------SCNSLTVDGNNAN-- 304 (420)
T ss_dssp ECCTTSS----------------------------------------------------------CEEEEEECSSCTT--
T ss_pred cccccCC----------------------------------------------------------CceeEEEeCCCCC--
Confidence 22 1222 2344444454432
Q ss_pred ceEEEEEeCCCeEEEEECCCCe-EEEEecC-CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC---------ceEEEe
Q psy467 292 FILTTSSSADRTVNFWDLEKFS-LVSTTEK-NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA---------RQYDAQ 359 (845)
Q Consensus 292 ~~lLatgs~DG~I~IWDl~s~~-~l~tl~g-h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg---------k~l~tl 359 (845)
+|++|+.||.|++||+++++ ++..+.+ |...|+++.| +++++|++++.|+ |++|++... .....+
T Consensus 305 --~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~ 381 (420)
T 3vl1_A 305 --YIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFL 381 (420)
T ss_dssp --EEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEE
T ss_pred --EEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEE
Confidence 79999999999999999874 4667776 6677888855 5788999999999 999999873 223346
Q ss_pred cCCCCCeEEEEEc-CCc----eEEEE----EEEEeeCC
Q psy467 360 PMGWGKVQDLAVT-GTQ----LWFRR----VGTWSHQD 388 (845)
Q Consensus 360 ~~h~~~VtsVafS-dg~----lLaaS----VsiW~~d~ 388 (845)
..|.+.|.+++|+ +++ +++++ +.+|.+..
T Consensus 382 ~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 382 VSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 6788999999999 777 66666 88897653
No 56
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-33 Score=310.53 Aligned_cols=262 Identities=13% Similarity=0.107 Sum_probs=207.6
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC--eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS--NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~--~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
.+..|.+.|++++|+| ++++||+|+.|+.|+||++.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 6 ~~~~~~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNS-QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp EEEECSSCCSCCEECS-SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred eEecCCCcEEEEEECC-CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 4455778999999999 9999999999999999999988 778889999999999999999999999999999999999
Q ss_pred CCCc---EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc---eEEEEcC-CCCCeEEEEEecCCCEEEEE
Q psy467 88 AVPT---VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG---CIYTYRG-HSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 88 ~tg~---~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~---~l~~~~~-h~~~V~sLafSPdg~~Lasg 160 (845)
.+++ ....+..|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |...|.+++|+|++++|+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 9877 677788899999999999999999999999999999998876 4677777 99999999999999999999
Q ss_pred eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccc
Q psy467 161 GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQA 240 (845)
Q Consensus 161 s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~ 240 (845)
+.|+.|++ ||+........... .+.+. ... .
T Consensus 165 ~~d~~i~i-------------wd~~~~~~~~~~~~--------~~~~~--------~~~-------~------------- 195 (377)
T 3dwl_C 165 CADRKAYV-------------LSAYVRDVDAKPEA--------SVWGS--------RLP-------F------------- 195 (377)
T ss_dssp ESSSCEEE-------------EEECCSSCC-CCCS--------CSSCS--------CCC-------E-------------
T ss_pred eCCCEEEE-------------EEEEecccCCCccc--------ccccc--------ccc-------h-------------
Confidence 99999999 99876553111000 00000 000 0
Q ss_pred cchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE----EE
Q psy467 241 GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL----VS 316 (845)
Q Consensus 241 ~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~----l~ 316 (845)
......- .+...|++++|+|+++ +|++++.||.|++||+.++++ +.
T Consensus 196 --------------~~~~~~~-----------~~~~~v~~~~~sp~~~-----~l~~~~~d~~i~iwd~~~~~~~~~~~~ 245 (377)
T 3dwl_C 196 --------------NTVCAEY-----------PSGGWVHAVGFSPSGN-----ALAYAGHDSSVTIAYPSAPEQPPRALI 245 (377)
T ss_dssp --------------EEEEECC-----------CCSSSEEEEEECTTSS-----CEEEEETTTEEC-CEECSTTSCEEECC
T ss_pred --------------hhhhhcc-----------cCCceEEEEEECCCCC-----EEEEEeCCCcEEEEECCCCCCcceeeE
Confidence 0000000 1234577777778777 899999999999999999876 77
Q ss_pred EecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEec
Q psy467 317 TTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351 (845)
Q Consensus 317 tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~ 351 (845)
.+.+|...|.+++|+|+|++|++++.+++.+|+..
T Consensus 246 ~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 246 TVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp CEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred eecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 88899999999999999999999988886677765
No 57
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=8.5e-32 Score=302.71 Aligned_cols=297 Identities=14% Similarity=0.207 Sum_probs=232.0
Q ss_pred eeeeEEecc-------CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe-----------eEEEecCCC--------
Q psy467 5 VEKAEDFMA-------HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN-----------CIMSLSGHS-------- 58 (845)
Q Consensus 5 lw~l~~L~g-------H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~-----------~i~~l~~h~-------- 58 (845)
-|+..+..+ |.+.|++++|+| +|++||+|+.||.|+||++.+++ ....+.+|.
T Consensus 11 ~w~~~q~~~~~~~~~~~~~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 89 (447)
T 3dw8_B 11 QWCFSQVKGAVDDDVAEADIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKS 89 (447)
T ss_dssp CCEEEECCSCSSSCCCGGGSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGT
T ss_pred eEEEEEecccccccccccCcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccccccccccccc
Confidence 466555443 478999999999 99999999999999999998776 578889998
Q ss_pred ----CCeEEEEEcCCC--CEEEEEECCCcEEEEECCCCcEE---------------------------------------
Q psy467 59 ----TPVESVQFGNGE--ETLSAGCQSGSIKIWNLAVPTVQ--------------------------------------- 93 (845)
Q Consensus 59 ----~~V~sLafSpdg--~~LaSgs~DGtV~VWDl~tg~~v--------------------------------------- 93 (845)
..|.+++|+|++ .+|++++.|+.|++||+.++...
T Consensus 90 ~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (447)
T 3dw8_B 90 LEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPR 169 (447)
T ss_dssp EEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEE
T ss_pred ccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccce
Confidence 889999999998 79999999999999999764432
Q ss_pred EE-EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC-CceEEE-------EcCCCCCeEEEEEecCC-CEEEEEeCC
Q psy467 94 RT-LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-KGCIYT-------YRGHSKSINSIRFSPDG-QWIASGGED 163 (845)
Q Consensus 94 ~~-l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t-~~~l~~-------~~~h~~~V~sLafSPdg-~~Lasgs~D 163 (845)
.. ..+|...|.+++|+|++++|++| .|+.|++||+++ +..+.. +..|...|.+++|+|++ ++|++++.|
T Consensus 170 ~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 248 (447)
T 3dw8_B 170 RIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK 248 (447)
T ss_dssp EEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT
T ss_pred EEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC
Confidence 12 36799999999999999999998 799999999984 344442 45789999999999998 999999999
Q ss_pred CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccch
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEE 243 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~ 243 (845)
|.|++ ||+++++.... .+..+..+... .
T Consensus 249 g~i~i-------------wd~~~~~~~~~----------------~~~~~~~~~~~-------~---------------- 276 (447)
T 3dw8_B 249 GTIRL-------------CDMRASALCDR----------------HSKLFEEPEDP-------S---------------- 276 (447)
T ss_dssp SCEEE-------------EETTTCSSSCT----------------TCEEECCC---------------------------
T ss_pred CeEEE-------------EECcCCccccc----------------eeeEeccCCCc-------c----------------
Confidence 99999 99998775111 02233333221 0
Q ss_pred hhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC-CeEEEEecCCC
Q psy467 244 ELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK-FSLVSTTEKNS 322 (845)
Q Consensus 244 ~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s-~~~l~tl~gh~ 322 (845)
.......+...|.+++|+|+++ +|++++. +.|++||+++ ++++..+.+|.
T Consensus 277 -----------------------~~~~~~~~~~~v~~~~~s~~g~-----~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~ 327 (447)
T 3dw8_B 277 -----------------------NRSFFSEIISSISDVKFSHSGR-----YMMTRDY-LSVKVWDLNMENRPVETYQVHE 327 (447)
T ss_dssp ------------------------CCHHHHHTTCEEEEEECTTSS-----EEEEEES-SEEEEEETTCCSSCSCCEESCG
T ss_pred -----------------------ccccccccCceEEEEEECCCCC-----EEEEeeC-CeEEEEeCCCCccccceeeccc
Confidence 0000111234566777777776 8999998 9999999997 88888888875
Q ss_pred CC---------------EEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEec--------------------------
Q psy467 323 ST---------------IRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQP-------------------------- 360 (845)
Q Consensus 323 ~~---------------VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~-------------------------- 360 (845)
.. +..++|+|+|++|++|+.|+ |+|||+.+++.+. +.
T Consensus 328 ~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (447)
T 3dw8_B 328 YLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKD 406 (447)
T ss_dssp GGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTT
T ss_pred cccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCcccc
Confidence 32 33499999999999999999 9999999987653 22
Q ss_pred -------CCCCCeEEEEEc-CCceEEEE----EEEEe
Q psy467 361 -------MGWGKVQDLAVT-GTQLWFRR----VGTWS 385 (845)
Q Consensus 361 -------~h~~~VtsVafS-dg~lLaaS----VsiW~ 385 (845)
.+...|.+++|+ ++.+||++ +.+|.
T Consensus 407 ~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~ 443 (447)
T 3dw8_B 407 EISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQ 443 (447)
T ss_dssp CEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEE
T ss_pred cccccccccCCceeEEEECCCCCEEEEEecceeeeec
Confidence 234568999999 88999888 77775
No 58
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5e-31 Score=295.34 Aligned_cols=279 Identities=23% Similarity=0.341 Sum_probs=237.3
Q ss_pred EEeccCCCc--EEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC-CCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 9 EDFMAHGAS--VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG-HSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 9 ~~L~gH~~~--V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~-h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
....+|... +.+++|++ ..+++++.||.|++|++.+++....+.. |...|.+++|+|++++|++|+.||.|++|
T Consensus 85 ~~~~~~~~~~~~~~~~~s~---~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iw 161 (401)
T 4aez_A 85 LDAPGIIDDYYLNLLDWSN---LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIY 161 (401)
T ss_dssp EECTTCCCCTTCBCEEECT---TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeCCCCcCCceEEEEeecC---CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEE
Confidence 344577665 44566654 5577888999999999999998887765 88999999999999999999999999999
Q ss_pred ECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECC-CCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCC
Q psy467 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR-RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG 164 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~-t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG 164 (845)
|+.+++.+..+.+|...|.+++|+ +++|++++.||.|++||++ ....+..+..|...|.+++|+|++++|++++.||
T Consensus 162 d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 162 DVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 999999999999999999999994 6799999999999999998 5667888889999999999999999999999999
Q ss_pred cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchh
Q psy467 165 VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244 (845)
Q Consensus 165 ~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~ 244 (845)
.|++ ||++++.. +..+..|... +
T Consensus 240 ~v~i-------------wd~~~~~~--------------------~~~~~~~~~~-------v----------------- 262 (401)
T 4aez_A 240 VVQI-------------WDARSSIP--------------------KFTKTNHNAA-------V----------------- 262 (401)
T ss_dssp CEEE-------------EETTCSSE--------------------EEEECCCSSC-------C-----------------
T ss_pred eEEE-------------ccCCCCCc--------------------cEEecCCcce-------E-----------------
Confidence 9999 99998766 5555555444 4
Q ss_pred hhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe--CCCeEEEEECCCCeEEEEecCCC
Q psy467 245 LFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS--ADRTVNFWDLEKFSLVSTTEKNS 322 (845)
Q Consensus 245 l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs--~DG~I~IWDl~s~~~l~tl~gh~ 322 (845)
.+++|+|++. . ++++|+ .|+.|++||+.+++++..+. +.
T Consensus 263 ----------~~~~~~p~~~------------------------~----ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~ 303 (401)
T 4aez_A 263 ----------KAVAWCPWQS------------------------N----LLATGGGTMDKQIHFWNAATGARVNTVD-AG 303 (401)
T ss_dssp ----------CEEEECTTST------------------------T----EEEEECCTTTCEEEEEETTTCCEEEEEE-CS
T ss_pred ----------EEEEECCCCC------------------------C----EEEEecCCCCCEEEEEECCCCCEEEEEe-CC
Confidence 5555555443 1 777765 79999999999999998886 56
Q ss_pred CCEEEEEEeCCCCEEEEEe--CCC-EEEEEecCCceEE--EecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCC
Q psy467 323 STIRRLTFSEGGECLLGGD--TEG-LKVYGWEPARQYD--AQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 323 ~~VtslafSpdG~~Lasgs--~DG-I~IWDl~tgk~l~--tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~ 388 (845)
..|.+++|+|+|++|++++ .|+ |++|++.+++... .+.+|...|.+++|+ ++++|+++ +.+|.+..
T Consensus 304 ~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 304 SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 7899999999999999954 788 9999999976554 467899999999999 89988887 99997753
No 59
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.1e-30 Score=296.77 Aligned_cols=277 Identities=21% Similarity=0.393 Sum_probs=243.2
Q ss_pred eeEEeccCCCcE-EEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 7 KAEDFMAHGASV-NCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 7 ~l~~L~gH~~~V-~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
....+.+|.+.| .|+.+ ++++|++|+.||+|++||+.+++.+..+.+|...|.+++|++++ +|++|+.||+|++|
T Consensus 113 ~~~~l~~h~~~v~~~~~~---~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF---EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp EEEEEECCSSSCEEEEEE---ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred ceEEEcCCCCCcEEEEEE---CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 356899999885 67776 45799999999999999999999999999999999999999987 99999999999999
Q ss_pred ECCCCcEEEEEcCCCCCeEEEEEc--cCCCEEEEEECCCeEEEEECCCCce-----------------------EEEEcC
Q psy467 86 NLAVPTVQRTLNGHKSSITSVDFH--PYGDYLCSGSLDSFIKLWDLRRKGC-----------------------IYTYRG 140 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~V~~lafs--pdg~~Lasgs~DG~I~IWDl~t~~~-----------------------l~~~~~ 140 (845)
|+.+++.+..+.+|...|.+++|+ ++++++++|+.||.|++||+.++.. +..+.+
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 999999999999999999999999 4778999999999999999987652 556777
Q ss_pred CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCC
Q psy467 141 HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 141 h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~ 220 (845)
|...+.++ +++++++++++.||.|++ ||+.+++. +..+.+|...
T Consensus 269 ~~~~v~~~--~~~~~~l~~~~~d~~i~v-------------wd~~~~~~--------------------~~~~~~~~~~- 312 (464)
T 3v7d_B 269 HMASVRTV--SGHGNIVVSGSYDNTLIV-------------WDVAQMKC--------------------LYILSGHTDR- 312 (464)
T ss_dssp CSSCEEEE--EEETTEEEEEETTSCEEE-------------EETTTTEE--------------------EEEECCCSSC-
T ss_pred ccceEEEE--cCCCCEEEEEeCCCeEEE-------------EECCCCcE--------------------EEEecCCCCC-
Confidence 88888876 567999999999999999 99998877 6666666655
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA 300 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~ 300 (845)
+ .+++|+|++. ++++|+.
T Consensus 313 ------v---------------------------~~~~~~~~~~-----------------------------~l~sg~~ 330 (464)
T 3v7d_B 313 ------I---------------------------YSTIYDHERK-----------------------------RCISASM 330 (464)
T ss_dssp ------E---------------------------EEEEEETTTT-----------------------------EEEEEET
T ss_pred ------E---------------------------EEEEEcCCCC-----------------------------EEEEEeC
Confidence 5 6666666666 9999999
Q ss_pred CCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEE
Q psy467 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWF 378 (845)
Q Consensus 301 DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLa 378 (845)
||.|++||+.+++++.++.+|...|.+++|+ +.+|++++.|+ |++||+.++....... |...+..++|+ ++++++
T Consensus 331 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~ 407 (464)
T 3v7d_B 331 DTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILV 407 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEE
T ss_pred CCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEE
Confidence 9999999999999999999999999999997 57999999999 9999999987665553 66778888999 888888
Q ss_pred EE----EEEEeeCC
Q psy467 379 RR----VGTWSHQD 388 (845)
Q Consensus 379 aS----VsiW~~d~ 388 (845)
++ |.+|....
T Consensus 408 ~~~dg~i~iwd~~~ 421 (464)
T 3v7d_B 408 SGSENQFNIYNLRS 421 (464)
T ss_dssp EEETTEEEEEETTT
T ss_pred EecCCeEEEEECCC
Confidence 88 99997654
No 60
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.1e-32 Score=299.65 Aligned_cols=253 Identities=20% Similarity=0.257 Sum_probs=203.0
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe--eEEEecCCCCCeEEEEEcC--CCCEEEEEECCCcEEEE
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN--CIMSLSGHSTPVESVQFGN--GEETLSAGCQSGSIKIW 85 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~--~i~~l~~h~~~V~sLafSp--dg~~LaSgs~DGtV~VW 85 (845)
.+.+|.+.|++++|+| +|++||+|+.|++|+|||+.++. .+..+.+|...|.+++|++ ++++|++|+.|++|++|
T Consensus 8 ~~~~H~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 4679999999999999 99999999999999999998764 4678899999999999986 48999999999999999
Q ss_pred ECCCC--cEEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeEEEEECCCCce---EEEEcCCCCCeEEEEEecC-----
Q psy467 86 NLAVP--TVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGC---IYTYRGHSKSINSIRFSPD----- 153 (845)
Q Consensus 86 Dl~tg--~~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~~~---l~~~~~h~~~V~sLafSPd----- 153 (845)
|++++ .....+.+|...|.+++|+|+ +.+|++|+.|+.|++||++.+.. ...+.+|...|.+++|+|+
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 99987 466778899999999999998 78999999999999999987532 3445678889999999997
Q ss_pred ------------CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCc
Q psy467 154 ------------GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGT 221 (845)
Q Consensus 154 ------------g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~ 221 (845)
+++|++|+.|+.|++ ||++..... ..+..+.+|...
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~l-------------Wd~~~~~~~-----------------~~~~~l~~h~~~-- 214 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKL-------------WKEEEDGQW-----------------KEEQKLEAHSDW-- 214 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCE-------------EEECTTSCE-----------------EEEECCBCCSSC--
T ss_pred ccccccccCccccceEEEecCCCeEEE-------------EEeCCCCcc-----------------ceeeecccCCCc--
Confidence 468999999999999 998654210 013344555554
Q ss_pred cceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC
Q psy467 222 KAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD 301 (845)
Q Consensus 222 ~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D 301 (845)
| .+++|+|++. .++. +|++|+.|
T Consensus 215 -----V---------------------------~~v~~sp~~~--------------------~~~~-----~las~s~D 237 (316)
T 3bg1_A 215 -----V---------------------------RDVAWAPSIG--------------------LPTS-----TIASCSQD 237 (316)
T ss_dssp -----E---------------------------EEEECCCCSS--------------------CSCC-----EEEEEETT
T ss_pred -----e---------------------------EEEEecCCCC--------------------CCCc-----eEEEEcCC
Confidence 4 5556665541 0012 89999999
Q ss_pred CeEEEEECCCC---e-EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 302 RTVNFWDLEKF---S-LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 302 G~I~IWDl~s~---~-~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
++|++||+.+. . ....+..|...|.+++|+|+|++||+++.|+ |+||+...
T Consensus 238 ~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 238 GRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred CeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 99999998762 1 2234556888999999999999999999999 99999863
No 61
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=8.4e-32 Score=291.30 Aligned_cols=271 Identities=14% Similarity=0.135 Sum_probs=230.6
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe---eEEEecCCCCCeEEEEEcCCCC-EEEEEECCCcEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN---CIMSLSGHSTPVESVQFGNGEE-TLSAGCQSGSIKI 84 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~---~i~~l~~h~~~V~sLafSpdg~-~LaSgs~DGtV~V 84 (845)
+...+|.+.|++++|+| ++++|++++.||.|++|++.++. ....+.+|...|.+++|+|+++ +|++|+.||.|++
T Consensus 5 ~~~~~h~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp ECSSCCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred ecccCCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 34568999999999999 99999999999999999998776 3455668999999999999999 9999999999999
Q ss_pred EEC-CCCcEEEEEcC--CCCCeEEEEEccCCCEEEEEECCCeEEEEECCC---------CceEEEEcCCCCCeEEEEEec
Q psy467 85 WNL-AVPTVQRTLNG--HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR---------KGCIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 85 WDl-~tg~~v~~l~~--h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t---------~~~l~~~~~h~~~V~sLafSP 152 (845)
||+ .+++. ..+.+ |...|.+++|+| +++|++++.|+.|++||+++ ++++..+. |...|.+++|+|
T Consensus 84 wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 160 (342)
T 1yfq_A 84 VDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNS 160 (342)
T ss_dssp ECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECS
T ss_pred EEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecC
Confidence 999 87754 77788 999999999999 99999999999999999987 66666666 888999999998
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCC-CccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSL-VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~t-g~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
++ +++++.|+.|++ ||+++ +.... ......+..
T Consensus 161 ~~--l~~~~~d~~i~i-------------~d~~~~~~~~~------------------~~~~~~~~~------------- 194 (342)
T 1yfq_A 161 SR--LIVGMNNSQVQW-------------FRLPLCEDDNG------------------TIEESGLKY------------- 194 (342)
T ss_dssp SE--EEEEESTTEEEE-------------EESSCCTTCCC------------------EEEECSCSS-------------
T ss_pred Cc--EEEEeCCCeEEE-------------EECCccccccc------------------eeeecCCCC-------------
Confidence 87 999999999999 99987 44300 111111222
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC-CCCcccceEEEEEeCCCeEEEEECC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP-QSPMLCFILTTSSSADRTVNFWDLE 310 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP-dg~~~~~~lLatgs~DG~I~IWDl~ 310 (845)
.+.+++|+| +++ ++++++.||.|++||++
T Consensus 195 ---------------------------------------------~i~~i~~~~~~~~-----~l~~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 195 ---------------------------------------------QIRDVALLPKEQE-----GYACSSIDGRVAVEFFD 224 (342)
T ss_dssp ---------------------------------------------CEEEEEECSGGGC-----EEEEEETTSEEEEEECC
T ss_pred ---------------------------------------------ceeEEEECCCCCC-----EEEEEecCCcEEEEEEc
Confidence 234445555 444 99999999999999998
Q ss_pred CC------eEEEEecCCCC---------CEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCC-CCCeEEEEEcC
Q psy467 311 KF------SLVSTTEKNSS---------TIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMG-WGKVQDLAVTG 373 (845)
Q Consensus 311 s~------~~l~tl~gh~~---------~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h-~~~VtsVafSd 373 (845)
.. +....+..|.. .|++++|+|++++|++++.|| |++||+.+++.+..+.+| ...|++++ .+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~-~~ 303 (342)
T 1yfq_A 225 DQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA-CS 303 (342)
T ss_dssp TTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE-EC
T ss_pred CCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec-CC
Confidence 77 77788888755 999999999999999999999 999999999999999998 99999999 88
Q ss_pred CceEEEE
Q psy467 374 TQLWFRR 380 (845)
Q Consensus 374 g~lLaaS 380 (845)
+++|+++
T Consensus 304 ~~~l~s~ 310 (342)
T 1yfq_A 304 DNILCLA 310 (342)
T ss_dssp SSEEEEE
T ss_pred CCeEEEE
Confidence 8877766
No 62
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.9e-32 Score=309.22 Aligned_cols=285 Identities=12% Similarity=0.170 Sum_probs=228.4
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee--EEEecCCCCCeEEEEEcC-CCCEEEEEECCCcEEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC--IMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIW 85 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~--i~~l~~h~~~V~sLafSp-dg~~LaSgs~DGtV~VW 85 (845)
....+|...|+||+|+|.++++||+|+.||.|+|||+.+++. ...+.+|...|++|+|+| ++++|++|+.||+|++|
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 456789999999999997788999999999999999977654 445678999999999998 78999999999999999
Q ss_pred ECCCCcEEEEEcC--CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCC-EEEEEeC
Q psy467 86 NLAVPTVQRTLNG--HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ-WIASGGE 162 (845)
Q Consensus 86 Dl~tg~~v~~l~~--h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~-~Lasgs~ 162 (845)
|++++........ +...+.+++|+|++++|++|+.||.|++||++ ++.+..+.+|...|.+++|+|++. +|++++.
T Consensus 193 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 193 DFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp ETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEET
T ss_pred eccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecC
Confidence 9987654444333 34467899999999999999999999999996 466778889999999999999876 7889999
Q ss_pred CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 163 DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 163 DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
|+.|++ ||+++.+....+ ....+|.
T Consensus 272 d~~v~i-------------wd~~~~~~~~~~-----------------~~~~~h~------------------------- 296 (435)
T 4e54_B 272 DQTVKI-------------WDLRQVRGKASF-----------------LYSLPHR------------------------- 296 (435)
T ss_dssp TSBCCE-------------EETTTCCSSSCC-----------------SBCCBCS-------------------------
T ss_pred cceeeE-------------EecccccccceE-----------------EEeeecc-------------------------
Confidence 999999 999876651110 0011222
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS 322 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~ 322 (845)
..|++++|+|+|+ +|++|+.||.|+|||+.++.+...+..|.
T Consensus 297 ---------------------------------~~v~~~~~spdg~-----~l~s~~~D~~i~iwd~~~~~~~~~~~~~~ 338 (435)
T 4e54_B 297 ---------------------------------HPVNAACFSPDGA-----RLLTTDQKSEIRVYSASQWDCPLGLIPHP 338 (435)
T ss_dssp ---------------------------------SCEEECCBCTTSS-----EEEEEESSSCEEEEESSSSSSEEEECCCC
T ss_pred ---------------------------------ccccceeECCCCC-----eeEEEcCCCEEEEEECCCCccceEEeccc
Confidence 3345555666665 99999999999999999998887777654
Q ss_pred C------CEEEEEEeCCCCEEEEEe------------CCC-EEEEEecCCceEEEec-CCCCCeEEE-EEc-CCceEEEE
Q psy467 323 S------TIRRLTFSEGGECLLGGD------------TEG-LKVYGWEPARQYDAQP-MGWGKVQDL-AVT-GTQLWFRR 380 (845)
Q Consensus 323 ~------~VtslafSpdG~~Lasgs------------~DG-I~IWDl~tgk~l~tl~-~h~~~VtsV-afS-dg~lLaaS 380 (845)
. .+....|+|++.+++++. .++ |++||..+++++..+. +|...|.++ +|+ +|++|+++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg 418 (435)
T 4e54_B 339 HRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASA 418 (435)
T ss_dssp CCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEE
T ss_pred ccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEE
Confidence 2 234567777777777664 234 9999999999988765 678888887 699 99999887
Q ss_pred ----EEEEeeC
Q psy467 381 ----VGTWSHQ 387 (845)
Q Consensus 381 ----VsiW~~d 387 (845)
|.+|...
T Consensus 419 ~d~~i~iW~~~ 429 (435)
T 4e54_B 419 MGYHILIWSQQ 429 (435)
T ss_dssp CSSEEEECCCC
T ss_pred cCCcEEEEECC
Confidence 9999764
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-31 Score=291.23 Aligned_cols=259 Identities=21% Similarity=0.298 Sum_probs=215.2
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC--CCeeEEEecCCCCCeEEEEEcCC--CCEEEEEECCCcEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALG--KSNCIMSLSGHSTPVESVQFGNG--EETLSAGCQSGSIK 83 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~--t~~~i~~l~~h~~~V~sLafSpd--g~~LaSgs~DGtV~ 83 (845)
++.+.+|.+.|++++|+| ++++||+|+.||.|+||++. +++.+..+.+|...|.+++|+++ +++|++++.||.|+
T Consensus 4 ~~~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp -CCEEECCCCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred cEEecCCcccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 457899999999999999 99999999999999999997 56778889999999999999987 99999999999999
Q ss_pred EEECCCCc--EEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeEEEEECCCCc--eEEEEcCCCCCeEEEEEec-----
Q psy467 84 IWNLAVPT--VQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKG--CIYTYRGHSKSINSIRFSP----- 152 (845)
Q Consensus 84 VWDl~tg~--~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~~--~l~~~~~h~~~V~sLafSP----- 152 (845)
+||+.+++ .+..+..|...|.+++|+|+ +.+|++++.||.|++||++++. ....+..|...|.+++|+|
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccc
Confidence 99999987 77788889999999999999 9999999999999999998773 4456678999999999999
Q ss_pred --------CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 153 --------DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 153 --------dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
++.+|++++.||.|++ ||++++... ...+..+.+|...
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i-------------~d~~~~~~~----------------~~~~~~~~~h~~~----- 208 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKI-------------WKYNSDAQT----------------YVLESTLEGHSDW----- 208 (379)
T ss_dssp -------CTTCEEEEEETTSCEEE-------------EEEETTTTE----------------EEEEEEECCCSSC-----
T ss_pred cccccCCCCCCEEEEEeCCCeEEE-------------EEecCCCcc----------------eeeEEEEecccCc-----
Confidence 6999999999999999 999866540 0012333334333
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
+ .+++|+|++. .+. +|++++.||.|
T Consensus 209 --v---------------------------~~~~~sp~~~---------------------~~~-----~l~s~~~dg~i 233 (379)
T 3jrp_A 209 --V---------------------------RDVAWSPTVL---------------------LRS-----YLASVSQDRTC 233 (379)
T ss_dssp --E---------------------------EEEEECCCCS---------------------SSE-----EEEEEETTSCE
T ss_pred --E---------------------------eEEEECCCCC---------------------CCC-----eEEEEeCCCEE
Confidence 3 4444444410 034 99999999999
Q ss_pred EEEECCCCe---EEEEe--cCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceE
Q psy467 305 NFWDLEKFS---LVSTT--EKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQY 356 (845)
Q Consensus 305 ~IWDl~s~~---~l~tl--~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l 356 (845)
++||+.++. ....+ ..|...|++++|+|+|++|++++.|| |++|++..+...
T Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~ 291 (379)
T 3jrp_A 234 IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKW 291 (379)
T ss_dssp EEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEE
T ss_pred EEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcc
Confidence 999998863 22333 34888999999999999999999999 999999865443
No 64
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-33 Score=307.16 Aligned_cols=284 Identities=17% Similarity=0.274 Sum_probs=238.3
Q ss_pred CCcEEEEEEecCCCC-EEEEE----------eCCCeEEEEECCCCe---eEEEecCCCCCeEEEEEcCCCCEEEEEECCC
Q psy467 15 GASVNCLALGKKSGQ-VLATG----------GDDKKVNLWALGKSN---CIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80 (845)
Q Consensus 15 ~~~V~~LafSp~dg~-~LaTg----------s~DG~I~IWdl~t~~---~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG 80 (845)
...|.+++|+| +++ +|++| +.|+.|+||++.++. .+..+ .|...|.+++|+|++++|++++.||
T Consensus 12 ~~~v~~~~~sp-~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 12 FSRTATFAWSH-DKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp EEESCBCCBCS-SSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhcceEeeCC-CCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCC
Confidence 34789999999 665 99999 889999999998775 33334 4889999999999999999999999
Q ss_pred cEEEEECCC----CcEEEEEcCCCCCeEEEEEccC-CCEEEEEECCCeEEEEECCCCc------eEEE---EcCCCCCeE
Q psy467 81 SIKIWNLAV----PTVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKG------CIYT---YRGHSKSIN 146 (845)
Q Consensus 81 tV~VWDl~t----g~~v~~l~~h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~t~~------~l~~---~~~h~~~V~ 146 (845)
.|++||+.+ .+.+..+.+|...|.+++|+|+ +++|++++.||.|++||+.+++ .... +..|...|.
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI 169 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence 999999987 4588889999999999999998 8999999999999999998876 3322 356889999
Q ss_pred EEEEecC-CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 147 SIRFSPD-GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 147 sLafSPd-g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
+++|+|+ +.+|++++.||.|++ ||+++++. +..+..+...
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~i-------------wd~~~~~~--------------------~~~~~~~~~~------ 210 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASI-------------WDLKAKKE--------------------VIHLSYTSPN------ 210 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEE-------------EETTTTEE--------------------EEEECCCCCS------
T ss_pred EEEeCCCCCcEEEEEcCCCCEEE-------------EECCCCCc--------------------ceEEeccccc------
Confidence 9999998 789999999999999 99998776 4444332110
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCC---
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR--- 302 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG--- 302 (845)
..+...+.+++|+|++.. ++++++.|+
T Consensus 211 ----------------------------------------------~~~~~~v~~~~~~~~~~~----~l~~~~~d~~~~ 240 (416)
T 2pm9_A 211 ----------------------------------------------SGIKQQLSVVEWHPKNST----RVATATGSDNDP 240 (416)
T ss_dssp ----------------------------------------------SCCCCCEEEEEECSSCTT----EEEEEECCSSSC
T ss_pred ----------------------------------------------cccCCceEEEEECCCCCC----EEEEEECCCCCc
Confidence 001233455556665422 899999998
Q ss_pred eEEEEECCCC-eEEEEec-CCCCCEEEEEEeC-CCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CC-ce
Q psy467 303 TVNFWDLEKF-SLVSTTE-KNSSTIRRLTFSE-GGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GT-QL 376 (845)
Q Consensus 303 ~I~IWDl~s~-~~l~tl~-gh~~~VtslafSp-dG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg-~l 376 (845)
.|++||++++ .++..+. +|...|++++|+| ++++|++++.|+ |++||+.+++.+..+.+|...|++++|+ ++ ++
T Consensus 241 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 320 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDL 320 (416)
T ss_dssp CCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTE
T ss_pred eEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCE
Confidence 9999999986 6777888 8999999999999 999999999999 9999999999999999999999999999 77 67
Q ss_pred EEEE-----EEEEeeCCC
Q psy467 377 WFRR-----VGTWSHQDS 389 (845)
Q Consensus 377 LaaS-----VsiW~~d~~ 389 (845)
++++ |.+|.+...
T Consensus 321 l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 321 FACASFDNKIEVQTLQNL 338 (416)
T ss_dssp EEECCSSSEEEEEESCCC
T ss_pred EEEEecCCcEEEEEccCC
Confidence 7766 999987644
No 65
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-31 Score=289.13 Aligned_cols=283 Identities=12% Similarity=0.158 Sum_probs=232.6
Q ss_pred eeeeeEEeccCCCcEEEEEEecCC--CCEEEEEeCCCeEEEEECCC-CeeE-EEecCCCCCeEEEEEcCCCCEEEEEECC
Q psy467 4 KVEKAEDFMAHGASVNCLALGKKS--GQVLATGGDDKKVNLWALGK-SNCI-MSLSGHSTPVESVQFGNGEETLSAGCQS 79 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~LafSp~d--g~~LaTgs~DG~I~IWdl~t-~~~i-~~l~~h~~~V~sLafSpdg~~LaSgs~D 79 (845)
..+.++.+.+|.+.|+|++|+|+. |++|++|+.||.|++||+.+ +..+ ..+.+|...|.+++|+|++++|++++.|
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 107 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD 107 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC
Confidence 345678899999999999999933 79999999999999999986 5544 7888999999999999999999999999
Q ss_pred CcEEEEECCCCcEEEEEcCCCCCeEEEEE--ccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEE
Q psy467 80 GSIKIWNLAVPTVQRTLNGHKSSITSVDF--HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWI 157 (845)
Q Consensus 80 GtV~VWDl~tg~~v~~l~~h~~~V~~laf--spdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~L 157 (845)
|.|++||+.+++.+.. ..|...|.+++| ++++++|++++.||.|++||+++++.+..+..+. .+.++.+. +..+
T Consensus 108 g~v~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~ 183 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQI-AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMA 183 (368)
T ss_dssp SEEEEEETTTTEEEEE-EECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TTEE
T ss_pred CcEEEEEcCCCCceee-ccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec--CCee
Confidence 9999999999887764 459999999999 8899999999999999999999999998888654 56677776 4588
Q ss_pred EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccc
Q psy467 158 ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE 237 (845)
Q Consensus 158 asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~ 237 (845)
++++.++.+.+ |++..... .......... .. .
T Consensus 184 ~~~~~~~~i~~-------------~~~~~~~~--------------------~~~~~~~~~~---~~--~---------- 215 (368)
T 3mmy_A 184 VVATAERGLIV-------------YQLENQPS--------------------EFRRIESPLK---HQ--H---------- 215 (368)
T ss_dssp EEEEGGGCEEE-------------EECSSSCE--------------------EEEECCCSCS---SC--E----------
T ss_pred EEEeCCCcEEE-------------EEeccccc--------------------hhhhcccccc---CC--C----------
Confidence 89999999999 99876543 1111000000 00 1
Q ss_pred ccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC---eE
Q psy467 238 DQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF---SL 314 (845)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~---~~ 314 (845)
..+.+.++.. .. ...+++++.||.|++||++.. ..
T Consensus 216 -----------------~~~~~~~~~~----------------------~~---~~~~~~~~~dg~i~i~~~~~~~~~~~ 253 (368)
T 3mmy_A 216 -----------------RCVAIFKDKQ----------------------NK---PTGFALGSIEGRVAIHYINPPNPAKD 253 (368)
T ss_dssp -----------------EEEEEEECTT----------------------SC---EEEEEEEETTSEEEEEESSCSCHHHH
T ss_pred -----------------ceEEEcccCC----------------------CC---CCeEEEecCCCcEEEEecCCCCcccc
Confidence 2333333322 00 015999999999999999887 55
Q ss_pred EEEecCCCC------------CEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 315 VSTTEKNSS------------TIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 315 l~tl~gh~~------------~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
+..+.+|.. .|++++|+|++++|++++.|| |++||+.+++++..+.+|...|++++|+ +|++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 333 (368)
T 3mmy_A 254 NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYA 333 (368)
T ss_dssp SEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEE
T ss_pred ceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEE
Confidence 677777765 799999999999999999999 9999999999999999999999999999 88888877
No 66
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.8e-30 Score=291.55 Aligned_cols=305 Identities=20% Similarity=0.361 Sum_probs=204.6
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v 93 (845)
....+.|+.++. ++|++|+.||.|++||+.+++.+..+.+|...|.+++|+ +++|++|+.||+|++||+.+++.+
T Consensus 118 ~~~v~~~~~~~g---~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~ 192 (445)
T 2ovr_B 118 DDHVITCLQFCG---NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECI 192 (445)
T ss_dssp TTSCEEEEEEET---TEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCcEEEEEEcC---CEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEE
Confidence 344566677777 467777777777777777777777777777777777776 456777777777777777777777
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeec
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~ 173 (845)
..+.+|...|.+++|+ ++.+++|+.||.|++||+.+++.+..+.+|...|.+++| +++++++++.||.|++
T Consensus 193 ~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i----- 263 (445)
T 2ovr_B 193 HTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV----- 263 (445)
T ss_dssp EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEE-----
T ss_pred EEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEE-----
Confidence 7777777777777774 456777777777777777777777777677777777777 4666777777777777
Q ss_pred cCCceeEEEECCCCccCCCCC--CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccC
Q psy467 174 LTNTSIHVVDLSLVHPLGTPP--PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIAN 251 (845)
Q Consensus 174 ~~~~~I~vWDl~tg~~l~~~~--~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~ 251 (845)
||+++++.+..+. ...+.++.+ ++..+..... ++.+.+|++....
T Consensus 264 --------wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~------d~~i~i~d~~~~~----------------- 310 (445)
T 2ovr_B 264 --------WDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL------DTSIRVWDVETGN----------------- 310 (445)
T ss_dssp --------EEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEET------TSCEEEEETTTCC-----------------
T ss_pred --------EECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeC------CCeEEEEECCCCC-----------------
Confidence 6666666543322 233344444 3333332111 1112222221100
Q ss_pred CCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC---CCCCEEEE
Q psy467 252 PCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK---NSSTIRRL 328 (845)
Q Consensus 252 ~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g---h~~~Vtsl 328 (845)
....+. .+...+.+++++ ++ ++++|+.||.|++||+.+++++..+.+ |...|+++
T Consensus 311 ---~~~~~~------------~~~~~v~~~~~~--~~-----~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 368 (445)
T 2ovr_B 311 ---CIHTLT------------GHQSLTSGMELK--DN-----ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 368 (445)
T ss_dssp ---EEEEEC------------CCCSCEEEEEEE--TT-----EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEE
T ss_pred ---EEEEEc------------CCcccEEEEEEe--CC-----EEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEE
Confidence 000010 112233444443 33 899999999999999999999999986 88899999
Q ss_pred EEeCCCCEEEEEeCCC-EEEEEecCCceEEEe-----cCCCCCeEEEEEc-CCceEEEE---------EEEEeeCCC
Q psy467 329 TFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ-----PMGWGKVQDLAVT-GTQLWFRR---------VGTWSHQDS 389 (845)
Q Consensus 329 afSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl-----~~h~~~VtsVafS-dg~lLaaS---------VsiW~~d~~ 389 (845)
+|+ +++|++|+.|| |++||+.+++.+..+ ..|.+.|++++|+ ++.+++++ +.+|..+..
T Consensus 369 ~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 369 QFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 995 67999999999 999999999998887 4678899999999 77887776 667766543
No 67
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.8e-31 Score=283.39 Aligned_cols=276 Identities=18% Similarity=0.223 Sum_probs=236.1
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcE-
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTV- 92 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~- 92 (845)
|.+.|.+++|+| +|++++++..++.+.+|............+|...|.+++|+|++++|++++ ||.|++||+.++..
T Consensus 8 ~~~~v~~~~~s~-dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 8 GSKPAYSFHVTA-DGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK 85 (337)
T ss_dssp EEEECCEEEECS-SSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC
T ss_pred cCCceeEEEECC-CCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce
Confidence 567899999999 999999998888787777665555555567999999999999999999998 99999999987653
Q ss_pred --EEEEc--CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc--eEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy467 93 --QRTLN--GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG--CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166 (845)
Q Consensus 93 --v~~l~--~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~--~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I 166 (845)
+..+. .|...|.+++|+|++++|++++.||.|++||+.+++ ....+..|...|.+++|+|+++++++++.||.|
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v 165 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 23333 688999999999999999999999999999999877 667778899999999999999999999999999
Q ss_pred EEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhh
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELF 246 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~ 246 (845)
++ ||+++++. +..+..|... +
T Consensus 166 ~~-------------~d~~~~~~--------------------~~~~~~~~~~-------i------------------- 186 (337)
T 1gxr_A 166 AV-------------WDLHNQTL--------------------VRQFQGHTDG-------A------------------- 186 (337)
T ss_dssp EE-------------EETTTTEE--------------------EEEECCCSSC-------E-------------------
T ss_pred EE-------------EeCCCCce--------------------eeeeecccCc-------e-------------------
Confidence 99 99988776 5555555544 4
Q ss_pred hhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEE
Q psy467 247 ATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vt 326 (845)
..++|+|++. +|++++.||.|++||+++++.+..+. +...+.
T Consensus 187 --------~~~~~~~~~~-----------------------------~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~ 228 (337)
T 1gxr_A 187 --------SCIDISNDGT-----------------------------KLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIF 228 (337)
T ss_dssp --------EEEEECTTSS-----------------------------EEEEEETTSEEEEEETTTTEEEEEEE-CSSCEE
T ss_pred --------EEEEECCCCC-----------------------------EEEEEecCCcEEEEECCCCceEeeec-CCCceE
Confidence 5566666655 99999999999999999999888775 678899
Q ss_pred EEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeCCC
Q psy467 327 RLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQDS 389 (845)
Q Consensus 327 slafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~~ 389 (845)
+++|+|++++|++++.++ |++||+.+++. ..+..|...|++++|+ ++++++++ +.+|.....
T Consensus 229 ~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 229 SLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCC
Confidence 999999999999999999 99999998775 4677899999999999 88888877 899976543
No 68
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=9.6e-31 Score=296.23 Aligned_cols=270 Identities=21% Similarity=0.404 Sum_probs=237.3
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg 90 (845)
..+|...|.|+++ ++++|++|+.||.|++||+.+++.+..+.+|...|.+++| ++++|++|+.||.|++||+.++
T Consensus 129 ~~~~~~~v~~~~~---d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 129 RSETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp CCSSCCCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred ccCCCCcEEEEEE---CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC
Confidence 3467778999988 6799999999999999999999999999999999999999 7889999999999999999999
Q ss_pred cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceE---EEEcCCCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI---YTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 91 ~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l---~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
+.+..+.+|...|.+++|+ +.++++|+.||.|++||+.++... ..+.+|...|.+++| +++++++++.||.|+
T Consensus 204 ~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~ 279 (435)
T 1p22_A 204 EMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 279 (435)
T ss_dssp CEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEE
T ss_pred cEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEE
Confidence 9999999999999999997 459999999999999999887655 677889999999999 589999999999999
Q ss_pred EeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~ 247 (845)
+ ||+++++. +..+.+|... +
T Consensus 280 v-------------wd~~~~~~--------------------~~~~~~~~~~-------v-------------------- 299 (435)
T 1p22_A 280 V-------------WNTSTCEF--------------------VRTLNGHKRG-------I-------------------- 299 (435)
T ss_dssp E-------------EETTTCCE--------------------EEEEECCSSC-------E--------------------
T ss_pred E-------------EECCcCcE--------------------EEEEcCCCCc-------E--------------------
Confidence 9 99998877 6677766665 5
Q ss_pred hccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEE
Q psy467 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRR 327 (845)
Q Consensus 248 ~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vts 327 (845)
.++.+ ++. ++++|+.||.|++||+++++++.++.+|...|.+
T Consensus 300 -------~~~~~--~~~-----------------------------~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 341 (435)
T 1p22_A 300 -------ACLQY--RDR-----------------------------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC 341 (435)
T ss_dssp -------EEEEE--ETT-----------------------------EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred -------EEEEe--CCC-----------------------------EEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEE
Confidence 55555 234 8999999999999999999999999999999999
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEecCCc---------eEEEecCCCCCeEEEEEcCCceEEEE-----EEEEeeCCCC
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGWEPAR---------QYDAQPMGWGKVQDLAVTGTQLWFRR-----VGTWSHQDSG 390 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl~tgk---------~l~tl~~h~~~VtsVafSdg~lLaaS-----VsiW~~d~~~ 390 (845)
++| ++.+|++|+.|| |++||+.+++ ++..+.+|.+.|++++| ++++|+++ |.+|.+....
T Consensus 342 ~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 342 IRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp EEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE-CSSCEEECCSSSEEEEEC-----
T ss_pred EEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe-CCCEEEEEeCCCEEEEEECCCCC
Confidence 999 788999999999 9999998766 88899999999999999 56666665 9999876543
No 69
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-31 Score=290.58 Aligned_cols=278 Identities=17% Similarity=0.208 Sum_probs=234.6
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v 93 (845)
|.+.|++++|+| ++++|++|+.||.|++|+ .+++.+..+..|...|.+++|+|++++|++++.||.|++||+.+++.+
T Consensus 107 ~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 107 TTNQVTCLAWSH-DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp -CBCEEEEEECT-TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE
T ss_pred CCCceEEEEEcC-CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE
Confidence 688999999999 999999999999999999 678889999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCC---------------eEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEE
Q psy467 94 RTLNGHKSS---------------ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 94 ~~l~~h~~~---------------V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~La 158 (845)
..+..+... +.+++|++++ .+++++.+|.|++||+.+++.+..+..|...|.+++|+|++++|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 263 (425)
T 1r5m_A 185 QHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLL 263 (425)
T ss_dssp EEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEE
T ss_pred EEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEE
Confidence 999877776 9999999975 688999999999999999999999999999999999999999999
Q ss_pred EEeCCCcEEEeeeeccCCceeEEEECCCCccCCCC--CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 159 SGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP--PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 159 sgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~--~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
+++.||.|++ ||+.+++.+... +...+..+.|+|++ .+.... . ...+.+|++....
T Consensus 264 ~~~~d~~i~i-------------~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~-~-----d~~i~i~d~~~~~-- 321 (425)
T 1r5m_A 264 SASDDGTLRI-------------WHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCS-M-----DGSVRLWSLKQNT-- 321 (425)
T ss_dssp EEETTSCEEE-------------ECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEE-T-----TSEEEEEETTTTE--
T ss_pred EEcCCCEEEE-------------EECCCCccceEecCCCccEEEEEECCCC-EEEEEe-C-----CCcEEEEECCCCc--
Confidence 9999999999 999987765443 35678899999998 444322 1 1233343332110
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe---
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS--- 313 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~--- 313 (845)
....+. .+...+.+++|+|+++ +|++++.||.|++||+.+++
T Consensus 322 ------------------~~~~~~------------~~~~~i~~~~~s~~~~-----~l~~~~~dg~i~i~~~~~~~~~~ 366 (425)
T 1r5m_A 322 ------------------LLALSI------------VDGVPIFAGRISQDGQ-----KYAVAFMDGQVNVYDLKKLNSKS 366 (425)
T ss_dssp ------------------EEEEEE------------CTTCCEEEEEECTTSS-----EEEEEETTSCEEEEECHHHHC--
T ss_pred ------------------EeEecc------------cCCccEEEEEEcCCCC-----EEEEEECCCeEEEEECCCCccce
Confidence 011111 1235688999999998 99999999999999999888
Q ss_pred -----------------EEEEecCCCC--CEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 314 -----------------LVSTTEKNSS--TIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 314 -----------------~l~tl~gh~~--~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
++..+.+|.. .|++++|+|++++|++++.|| |++|+++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 367 RSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred eeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 8999999976 999999999999999999999 9999985
No 70
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.4e-30 Score=276.42 Aligned_cols=254 Identities=24% Similarity=0.401 Sum_probs=220.0
Q ss_pred cceeeee-----------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCC
Q psy467 2 RAKVEKA-----------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70 (845)
Q Consensus 2 ~irlw~l-----------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg 70 (845)
++++|++ +.+.+|...|.+++|+| ++++|++++.|+.|++|+............+...+..+.+++++
T Consensus 62 ~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~-dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (340)
T 4aow_A 62 TIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS-DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 140 (340)
T ss_dssp CEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred eEEEEECCCCCcccceeeEEEeCCCCCEEEEEECC-CCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecC
Confidence 4788874 56889999999999999 99999999999999999999999999899899999999999999
Q ss_pred CEEEEEECCCcEEEEECCCCcEE-EEEcCCCCCeEEEEEccCC--CEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEE
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDFHPYG--DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v-~~l~~h~~~V~~lafspdg--~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~s 147 (845)
.+|++++.|+.+++||+...... ....+|...+.+++|++++ .++++++.|+.|++||+++++.+..+.+|...|.+
T Consensus 141 ~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~ 220 (340)
T 4aow_A 141 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 220 (340)
T ss_dssp SCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred ccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEE
Confidence 99999999999999999876543 3456788999999999865 57899999999999999999999999999999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeE
Q psy467 148 IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDV 227 (845)
Q Consensus 148 LafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V 227 (845)
++|+|++++|++++.||.|++ ||+.+.+. +..+..+. . +
T Consensus 221 ~~~s~~~~~l~s~s~Dg~i~i-------------wd~~~~~~--------------------~~~~~~~~-~-------v 259 (340)
T 4aow_A 221 VTVSPDGSLCASGGKDGQAML-------------WDLNEGKH--------------------LYTLDGGD-I-------I 259 (340)
T ss_dssp EEECTTSSEEEEEETTCEEEE-------------EETTTTEE--------------------EEEEECSS-C-------E
T ss_pred EEECCCCCEEEEEeCCCeEEE-------------EEeccCce--------------------eeeecCCc-e-------E
Confidence 999999999999999999999 99998776 54444332 2 3
Q ss_pred eeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEE
Q psy467 228 TRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFW 307 (845)
Q Consensus 228 ~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IW 307 (845)
..+.|+|++. +++++.|+.|++|
T Consensus 260 ---------------------------~~~~~~~~~~------------------------------~~~~~~d~~i~iw 282 (340)
T 4aow_A 260 ---------------------------NALCFSPNRY------------------------------WLCAATGPSIKIW 282 (340)
T ss_dssp ---------------------------EEEEECSSSS------------------------------EEEEEETTEEEEE
T ss_pred ---------------------------EeeecCCCCc------------------------------eeeccCCCEEEEE
Confidence 4555555544 4566679999999
Q ss_pred ECCCCeEEEEec---------CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCc
Q psy467 308 DLEKFSLVSTTE---------KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 308 Dl~s~~~l~tl~---------gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk 354 (845)
|++++..+..+. +|...|++++|+|||++|++|+.|| |+|||+.+|.
T Consensus 283 d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 283 DLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 999988776654 5788999999999999999999999 9999999985
No 71
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-30 Score=320.90 Aligned_cols=349 Identities=9% Similarity=0.020 Sum_probs=246.6
Q ss_pred cceeeee------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE-----------EEecCCCCCeEEE
Q psy467 2 RAKVEKA------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI-----------MSLSGHSTPVESV 64 (845)
Q Consensus 2 ~irlw~l------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i-----------~~l~~h~~~V~sL 64 (845)
++++|++ +.+. |.+.|++++|+| ++++|++|+.||.|++||+.+++.. ..+.+|...|.++
T Consensus 80 ~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl 157 (902)
T 2oaj_A 80 TVYVLSLYSQKVLTTVF-VPGKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSI 157 (902)
T ss_dssp EEEEEETTTCSEEEEEE-CSSCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEE
T ss_pred eEEEEECCCCcEEEEEc-CCCCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEE
Confidence 4678874 4554 778999999999 9999999999999999999988764 2346799999999
Q ss_pred EEcCC-CCEEEEEECCCcEEEEECCCCcEEEEEcCC------------------CCCeEEEEEccCCCEEEEEECCCeEE
Q psy467 65 QFGNG-EETLSAGCQSGSIKIWNLAVPTVQRTLNGH------------------KSSITSVDFHPYGDYLCSGSLDSFIK 125 (845)
Q Consensus 65 afSpd-g~~LaSgs~DGtV~VWDl~tg~~v~~l~~h------------------~~~V~~lafspdg~~Lasgs~DG~I~ 125 (845)
+|+|+ +..|++|+.||.| +||+++++.+..+..| ...|.+++|+|+|++|++|+.||.|+
T Consensus 158 ~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~ 236 (902)
T 2oaj_A 158 QWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLV 236 (902)
T ss_dssp EEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEE
T ss_pred EEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEE
Confidence 99996 5789999999999 9999999998888765 46799999999999999999999999
Q ss_pred EEECCCCceEEE--Ec---C-------------CCCCeEEEEEec----CC-CEEEEEeCCC-----cEEEeeee-----
Q psy467 126 LWDLRRKGCIYT--YR---G-------------HSKSINSIRFSP----DG-QWIASGGEDG-----VVRIGASF----- 172 (845)
Q Consensus 126 IWDl~t~~~l~~--~~---~-------------h~~~V~sLafSP----dg-~~Lasgs~DG-----~I~I~~~~----- 172 (845)
+||+++++++.. +. . |...|.+++|++ ++ .+|++|+.|. .+.+|..-
T Consensus 237 lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~ 316 (902)
T 2oaj_A 237 FWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRY 316 (902)
T ss_dssp EEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCG
T ss_pred EEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCc
Confidence 999999887754 21 1 244799999964 43 4677776652 55554310
Q ss_pred ---------------------c--------------------------------cCCceeEEEECCCCccCCCC------
Q psy467 173 ---------------------H--------------------------------LTNTSIHVVDLSLVHPLGTP------ 193 (845)
Q Consensus 173 ---------------------~--------------------------------~~~~~I~vWDl~tg~~l~~~------ 193 (845)
. ..++.+.+||+.++......
T Consensus 317 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~ 396 (902)
T 2oaj_A 317 SITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQN 396 (902)
T ss_dssp GGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGG
T ss_pred cccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCc
Confidence 0 01245777777655321110
Q ss_pred ---CCCCCc----------------------------------ceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 194 ---PPQYTS----------------------------------SVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 194 ---~~~~i~----------------------------------svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
+...+. .++|+|+++.+++-. . +..+.+|++......
T Consensus 397 l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs--~----DgtVrlWd~~~g~~~ 470 (902)
T 2oaj_A 397 LSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGH--S----NGSVRIYDASHGDIQ 470 (902)
T ss_dssp GTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEE--T----TSEEEEEESSCCTTT
T ss_pred ccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEec--C----CCcEEEEECCCcccc
Confidence 011122 223333333332211 0 112222222111000
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC----
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF---- 312 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~---- 312 (845)
. . ..+..... + .....+...|++++|+|||+ +||+|+.||+|+|||+.++
T Consensus 471 ~--------------~--~~~~~~l~-~----~~~~~h~~~V~svafspdg~-----~LAsgs~DgtV~lwd~~~~~~~~ 524 (902)
T 2oaj_A 471 D--------------N--ASFEVNLS-R----TLNKAKELAVDKISFAAETL-----ELAVSIETGDVVLFKYEVNQFYS 524 (902)
T ss_dssp T--------------T--BCEEEEHH-H----HTTCSSSCCEEEEEEETTTT-----EEEEEETTSCEEEEEEEECCC--
T ss_pred C--------------C--ceEEeech-h----hcCCCCCCceeEEEecCCCC-----eEEEEecCcEEEEEEecCccccC
Confidence 0 0 00000000 0 00013456899999999999 9999999999999998765
Q ss_pred -----------------------------------------eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 313 -----------------------------------------SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 313 -----------------------------------------~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
+++.++.+|.+.|++++||||| +||+|+.|+ |+|||+
T Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~ 603 (902)
T 2oaj_A 525 VENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDR 603 (902)
T ss_dssp -------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEET
T ss_pred ccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEEC
Confidence 3577888999999999999999 999999999 999999
Q ss_pred cCCceEE-----Eec-CCCCCeEEEEEc-----CC----ceEEEE-----EEEEee
Q psy467 351 EPARQYD-----AQP-MGWGKVQDLAVT-----GT----QLWFRR-----VGTWSH 386 (845)
Q Consensus 351 ~tgk~l~-----tl~-~h~~~VtsVafS-----dg----~lLaaS-----VsiW~~ 386 (845)
+++..+. .+. +|.+.|++|+|+ ++ ++|+++ |.+|.+
T Consensus 604 ~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 604 RGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp TTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred CCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 8877653 233 889999999999 43 677766 999986
No 72
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.4e-29 Score=285.59 Aligned_cols=274 Identities=20% Similarity=0.340 Sum_probs=229.8
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec--CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS--GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR 94 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~--~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~ 94 (845)
..+.|+||+ + ++||+|. |++|+|||..+++....+. +|...|++|+|+|+|++|++|+.||.|++||+.+++.+.
T Consensus 107 y~~~l~wS~-~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 107 YLNLVDWSS-G-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp TCBCEEECT-T-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cceeEEECC-C-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 467899997 3 5888876 8999999999998877664 678889999999999999999999999999999999999
Q ss_pred EEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeec
Q psy467 95 TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173 (845)
Q Consensus 95 ~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~ 173 (845)
.+.+|...+.+++++ +..|++|+.|+.+++||.... ..+..+.+|...+.++.|+|+++++++++.|+.+++
T Consensus 184 ~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i----- 256 (420)
T 4gga_A 184 NMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNV----- 256 (420)
T ss_dssp EECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE-----
T ss_pred EEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceE-----
Confidence 999999999988875 679999999999999999764 456778899999999999999999999999999999
Q ss_pred cCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCC
Q psy467 174 LTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPC 253 (845)
Q Consensus 174 ~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~ 253 (845)
||..+++.... .+.....|... |
T Consensus 257 --------~~~~~~~~~~~----------------~~~~~~~~~~~-------V-------------------------- 279 (420)
T 4gga_A 257 --------WPSAPGEGGWV----------------PLQTFTQHQGA-------V-------------------------- 279 (420)
T ss_dssp --------EESSCCSSCSC----------------CSEEECCCSSC-------E--------------------------
T ss_pred --------Eeeccccccce----------------eeeeecccCCc-------e--------------------------
Confidence 99987665110 02222333333 3
Q ss_pred ceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEE--EeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEe
Q psy467 254 DYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTS--SSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS 331 (845)
Q Consensus 254 ~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLat--gs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafS 331 (845)
..++|+| ++.. ++++ |+.|+.|++||+.+++++..+..| ..+.++.|+
T Consensus 280 -~~~~~~p------------------------~~~~----~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~ 329 (420)
T 4gga_A 280 -KAVAWCP------------------------WQSN----VLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWS 329 (420)
T ss_dssp -EEEEECT------------------------TCTT----EEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEE
T ss_pred -eeeeeCC------------------------Cccc----EEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeec
Confidence 4444444 4332 5554 457999999999999999988865 578999999
Q ss_pred CCCCEEEEEe--CCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 332 EGGECLLGGD--TEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 332 pdG~~Lasgs--~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
++++.+++++ .|+ |+|||+.+++++.++.+|.+.|++++|+ ||++|+++ |.+|.+.
T Consensus 330 ~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 330 PHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp TTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred CCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 9999998876 577 9999999999999999999999999999 89888877 9999764
No 73
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7e-31 Score=290.50 Aligned_cols=262 Identities=17% Similarity=0.233 Sum_probs=219.3
Q ss_pred eEEeccCCCcEEEEEEecCC----C---CEEEEEeCCCeEEEEECCCCee-----EEEecCC-----CCCeEEEEEc---
Q psy467 8 AEDFMAHGASVNCLALGKKS----G---QVLATGGDDKKVNLWALGKSNC-----IMSLSGH-----STPVESVQFG--- 67 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~d----g---~~LaTgs~DG~I~IWdl~t~~~-----i~~l~~h-----~~~V~sLafS--- 67 (845)
+..+.+|...|.+++|+| + + ++|++++.||.|++|++.+++. +..+..| ...|.+++|+
T Consensus 55 ~~~~~~h~~~v~~~~~~~-~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 55 SYSHFVHKSGLHHVDVLQ-AIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp EEEEECCTTCEEEEEEEE-EEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred ceEEecCCCcEEEEEEec-ccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 456779999999999999 7 8 9999999999999999988876 8888888 5999999999
Q ss_pred -CCCCE-EEEEECCCcEEEEECCC------CcEEE-----EE-------cCCCCCeEEEEEccCCCEEEEEECCCeEEEE
Q psy467 68 -NGEET-LSAGCQSGSIKIWNLAV------PTVQR-----TL-------NGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127 (845)
Q Consensus 68 -pdg~~-LaSgs~DGtV~VWDl~t------g~~v~-----~l-------~~h~~~V~~lafspdg~~Lasgs~DG~I~IW 127 (845)
|++++ |++++.||.|++||+.+ ++.+. .+ ..|...|.+++|+|++ +|++++.||.|++|
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 212 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEE
Confidence 99999 99999999999999998 65555 66 4588999999999999 99999999999999
Q ss_pred ECCCCceEEEEcC---C---CCCeEEEEEecCCCEEEEEeCC---CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCC
Q psy467 128 DLRRKGCIYTYRG---H---SKSINSIRFSPDGQWIASGGED---GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYT 198 (845)
Q Consensus 128 Dl~t~~~l~~~~~---h---~~~V~sLafSPdg~~Lasgs~D---G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i 198 (845)
|+++++.+..+.. | ...|.+++|+|++++|++++.| |.|++ ||+.+++.
T Consensus 213 d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i-------------~d~~~~~~--------- 270 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITL-------------YETEFGER--------- 270 (397)
T ss_dssp ETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEE-------------EETTTCCE---------
T ss_pred ECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEE-------------EECCCCcc---------
Confidence 9999999999998 8 9999999999999999999999 99999 99998776
Q ss_pred cceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCc
Q psy467 199 SSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSR 278 (845)
Q Consensus 199 ~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I 278 (845)
+..+...... - .... ....+...|
T Consensus 271 -----------~~~~~~~~~~-------~----------------------------~~~~----------~~~~~~~~v 294 (397)
T 1sq9_A 271 -----------IGSLSVPTHS-------S----------------------------QASL----------GEFAHSSWV 294 (397)
T ss_dssp -----------EEEECBC-----------------------------------------------------CCBSBSSCE
T ss_pred -----------cceeccCccc-------c----------------------------cccc----------cccccCCcE
Confidence 4444331110 0 0000 001123456
Q ss_pred eeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEec------CC---------------CCCEEEEEEeCCC---
Q psy467 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE------KN---------------SSTIRRLTFSEGG--- 334 (845)
Q Consensus 279 ~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~------gh---------------~~~VtslafSpdG--- 334 (845)
.+++|+|+++ +|++++.||.|++||+.+++++..+. +| ...|++++|+|+|
T Consensus 295 ~~~~~~~~~~-----~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~ 369 (397)
T 1sq9_A 295 MSLSFNDSGE-----TLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRS 369 (397)
T ss_dssp EEEEECSSSS-----EEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSB
T ss_pred EEEEECCCCC-----EEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccc
Confidence 6777777776 99999999999999999999999999 88 8999999999998
Q ss_pred -------CEEEEEeCCC-EEEEEecCCc
Q psy467 335 -------ECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 335 -------~~Lasgs~DG-I~IWDl~tgk 354 (845)
++|++++.|+ |++|++.+|+
T Consensus 370 ~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 370 GMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp STTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccccccceEEEecCCCcEEEEEcCCCC
Confidence 7999999999 9999998864
No 74
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.7e-30 Score=312.50 Aligned_cols=251 Identities=27% Similarity=0.445 Sum_probs=213.9
Q ss_pred cceeeee-----------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCC
Q psy467 2 RAKVEKA-----------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70 (845)
Q Consensus 2 ~irlw~l-----------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg 70 (845)
++++|++ +.+.+|...|.+++|+| ++++|++|+.||+|+|||+.++..+..+.+|...|.+++|+|++
T Consensus 406 ~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~ 484 (694)
T 3dm0_A 406 SIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS-DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDN 484 (694)
T ss_dssp EEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred cEEEEEccCCCcccccccceecCCCCcEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCC
Confidence 4678864 46889999999999999 99999999999999999999999999999999999999999999
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEEE---cCCCCCeEEEEEccCC--CEEEEEECCCeEEEEECCCCceEEEEcCCCCCe
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQRTL---NGHKSSITSVDFHPYG--DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI 145 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v~~l---~~h~~~V~~lafspdg--~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V 145 (845)
++|++|+.|++|++||.......... .+|...|.+++|+|++ ..|++++.|+.|++||++++++...+.+|...|
T Consensus 485 ~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v 564 (694)
T 3dm0_A 485 RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYV 564 (694)
T ss_dssp SCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred CEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE
Confidence 99999999999999998755433332 3688899999999987 689999999999999999999999999999999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 146 NSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
.+++|+|++++|++++.||.|++ ||+.+++. +..+..+ ..
T Consensus 565 ~~v~~spdg~~l~sg~~Dg~i~i-------------wd~~~~~~--------------------~~~~~~~-~~------ 604 (694)
T 3dm0_A 565 STVAVSPDGSLCASGGKDGVVLL-------------WDLAEGKK--------------------LYSLEAN-SV------ 604 (694)
T ss_dssp EEEEECTTSSEEEEEETTSBCEE-------------EETTTTEE--------------------EECCBCS-SC------
T ss_pred EEEEEeCCCCEEEEEeCCCeEEE-------------EECCCCce--------------------EEEecCC-Cc------
Confidence 99999999999999999999999 99998776 3322211 11
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
+ .+++|+|++. ++++++ ++.|+
T Consensus 605 -v---------------------------~~~~~sp~~~-----------------------------~l~~~~-~~~i~ 626 (694)
T 3dm0_A 605 -I---------------------------HALCFSPNRY-----------------------------WLCAAT-EHGIK 626 (694)
T ss_dssp -E---------------------------EEEEECSSSS-----------------------------EEEEEE-TTEEE
T ss_pred -E---------------------------EEEEEcCCCc-----------------------------EEEEEc-CCCEE
Confidence 2 4455555544 666655 66799
Q ss_pred EEECCCCeEEEEecCCC-------------------CCEEEEEEeCCCCEEEEEeCCC-EEEEEec
Q psy467 306 FWDLEKFSLVSTTEKNS-------------------STIRRLTFSEGGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 306 IWDl~s~~~l~tl~gh~-------------------~~VtslafSpdG~~Lasgs~DG-I~IWDl~ 351 (845)
+||+.+++.+..+..+. ..+++++|||+|++|++|+.|| |+||++.
T Consensus 627 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 627 IWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 99999999888775321 2378999999999999999999 9999975
No 75
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-30 Score=276.79 Aligned_cols=254 Identities=19% Similarity=0.320 Sum_probs=223.2
Q ss_pred ceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEE
Q psy467 3 AKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAG 76 (845)
Q Consensus 3 irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSg 76 (845)
+++|+ ++.+.+|.+.|.+++|+| ++++|++++.||.|++||+.+++.+..+. |...|.+++|+|++++|+++
T Consensus 56 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 133 (369)
T 3zwl_B 56 ASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAI 133 (369)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEE
T ss_pred EEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEe
Confidence 56776 467899999999999999 99999999999999999999999999888 88999999999999999999
Q ss_pred ECC-----CcEEEEECCCCc-----------EEEEEcCCCC--CeEEEEEccCCCEEEEEECCCeEEEEECCC-CceEEE
Q psy467 77 CQS-----GSIKIWNLAVPT-----------VQRTLNGHKS--SITSVDFHPYGDYLCSGSLDSFIKLWDLRR-KGCIYT 137 (845)
Q Consensus 77 s~D-----GtV~VWDl~tg~-----------~v~~l~~h~~--~V~~lafspdg~~Lasgs~DG~I~IWDl~t-~~~l~~ 137 (845)
+.+ |.|.+||+..+. ....+..|.. .+.+++|+|++++|++++.||.|++||+++ +..+..
T Consensus 134 ~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 213 (369)
T 3zwl_B 134 LDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDS 213 (369)
T ss_dssp ECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEE
T ss_pred cCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEE
Confidence 998 999999997653 3344445665 899999999999999999999999999998 788889
Q ss_pred EcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCC
Q psy467 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGR 217 (845)
Q Consensus 138 ~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~ 217 (845)
+..|...|.+++|+|++++|++++.||.|++ ||+.+++. +..+. +.
T Consensus 214 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v-------------~d~~~~~~--------------------~~~~~-~~ 259 (369)
T 3zwl_B 214 IDLHEKSISDMQFSPDLTYFITSSRDTNSFL-------------VDVSTLQV--------------------LKKYE-TD 259 (369)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEE-------------EETTTCCE--------------------EEEEE-CS
T ss_pred EecCCCceeEEEECCCCCEEEEecCCceEEE-------------EECCCCce--------------------eeeec-CC
Confidence 9999999999999999999999999999999 99988776 44443 22
Q ss_pred CCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEE
Q psy467 218 PGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTS 297 (845)
Q Consensus 218 ~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLat 297 (845)
.. + ..+.|+|++. ++++
T Consensus 260 ~~-------~---------------------------~~~~~~~~~~-----------------------------~l~~ 276 (369)
T 3zwl_B 260 CP-------L---------------------------NTAVITPLKE-----------------------------FIIL 276 (369)
T ss_dssp SC-------E---------------------------EEEEECSSSS-----------------------------EEEE
T ss_pred CC-------c---------------------------eeEEecCCCc-----------------------------eEEE
Confidence 22 2 4555555555 8888
Q ss_pred EeCCC--------------eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCce
Q psy467 298 SSADR--------------TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ 355 (845)
Q Consensus 298 gs~DG--------------~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~ 355 (845)
++.++ .+++||..+++++..+.+|...|++++|+|+|++|++++.|| |+||+++++..
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 277 GGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp EECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred eecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 88887 899999999999999999999999999999999999999999 99999987643
No 76
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.98 E-value=4.9e-30 Score=283.02 Aligned_cols=300 Identities=15% Similarity=0.200 Sum_probs=239.2
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-------------CCCCCeEEEEEcC-CCCEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-------------GHSTPVESVQFGN-GEETLS 74 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-------------~h~~~V~sLafSp-dg~~La 74 (845)
..+.+|.+.|++++|+|.++++||+|+.||.|++||+.+++....+. +|...|.+++|+| ++.+|+
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 46788999999999998778999999999999999998876544332 5999999999999 788999
Q ss_pred EEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCC---CEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEe
Q psy467 75 AGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG---DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151 (845)
Q Consensus 75 Sgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg---~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafS 151 (845)
+++.||.|++||+.+++....+. +...+.++.|++.+ .++++++.||.|++||+++++.+..+..|...|.+++|+
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~ 195 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWS 195 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEEC
T ss_pred EEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEEC
Confidence 99999999999999999888887 77889999999854 599999999999999999999999999999999999999
Q ss_pred cCCC-EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeee
Q psy467 152 PDGQ-WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRI 230 (845)
Q Consensus 152 Pdg~-~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i 230 (845)
|+++ ++++++.||.|++ ||++++... +..+..+... .
T Consensus 196 ~~~~~ll~~~~~dg~i~i-------------~d~~~~~~~-------------------~~~~~~~~~~-------~--- 233 (408)
T 4a11_B 196 PRYDYILATASADSRVKL-------------WDVRRASGC-------------------LITLDQHNGK-------K--- 233 (408)
T ss_dssp SSCTTEEEEEETTSCEEE-------------EETTCSSCC-------------------SEECCTTTTC-------S---
T ss_pred CCCCcEEEEEcCCCcEEE-------------EECCCCCcc-------------------cccccccccc-------c---
Confidence 9998 5899999999999 999876631 2222221111 0
Q ss_pred cccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC
Q psy467 231 EENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE 310 (845)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~ 310 (845)
..........+...|.+++|+|+++ +|++++.||.|++||+.
T Consensus 234 ---------------------------------~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~dg~i~vwd~~ 275 (408)
T 4a11_B 234 ---------------------------------SQAVESANTAHNGKVNGLCFTSDGL-----HLLTVGTDNRMRLWNSS 275 (408)
T ss_dssp ---------------------------------CCCTTTSSCSCSSCEEEEEECTTSS-----EEEEEETTSCEEEEETT
T ss_pred ---------------------------------ceeeccccccccCceeEEEEcCCCC-----EEEEecCCCeEEEEECC
Confidence 0000011123345677888888887 99999999999999999
Q ss_pred CCeEEEEecCC-----CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE---
Q psy467 311 KFSLVSTTEKN-----SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR--- 380 (845)
Q Consensus 311 s~~~l~tl~gh-----~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS--- 380 (845)
+++....+..+ ...+........+..+++++.++ |++||+.+++.+..+.+|.+.|++++|+ ++++|+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 355 (408)
T 4a11_B 276 NGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRD 355 (408)
T ss_dssp TCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred CCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCC
Confidence 98765544432 11222222233445566667777 9999999999999999999999999999 88888877
Q ss_pred --EEEEeeCCC
Q psy467 381 --VGTWSHQDS 389 (845)
Q Consensus 381 --VsiW~~d~~ 389 (845)
|.+|..+..
T Consensus 356 g~i~iw~~~~~ 366 (408)
T 4a11_B 356 CNILAWVPSLY 366 (408)
T ss_dssp SCEEEEEECC-
T ss_pred CeEEEEeCCCC
Confidence 999987643
No 77
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.98 E-value=1.2e-30 Score=283.64 Aligned_cols=254 Identities=16% Similarity=0.267 Sum_probs=209.3
Q ss_pred CCCcEEEEEEecCC----CCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcC-CCCEEEEEECCCcEEEEECC
Q psy467 14 HGASVNCLALGKKS----GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 14 H~~~V~~LafSp~d----g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSp-dg~~LaSgs~DGtV~VWDl~ 88 (845)
|...|.+++|+| + +.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+.
T Consensus 68 ~~~~v~~~~~~~-~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 68 ADENFYTCAWTY-DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp TTCCEEEEEEEE-CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCCcEEEEEecc-CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 668899999999 6 67999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCcEEEEE---cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc--------------------------
Q psy467 89 VPTVQRTL---NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR-------------------------- 139 (845)
Q Consensus 89 tg~~v~~l---~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~-------------------------- 139 (845)
+++.+..+ ..|...|.+++|+|++++|++++.||.|++||+++++....+.
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 99999888 6899999999999999999999999999999998765543333
Q ss_pred --CCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCC
Q psy467 140 --GHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGR 217 (845)
Q Consensus 140 --~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~ 217 (845)
.|...|.+++|+ ++++++++.|+.|++ ||+.++.......... ......+..+..|
T Consensus 227 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~-------------wd~~~~~~~~~~~~~~------~~~~~~~~~~~~~- 284 (366)
T 3k26_A 227 RDIHRNYVDCVRWL--GDLILSKSCENAIVC-------------WKPGKMEDDIDKIKPS------ESNVTILGRFDYS- 284 (366)
T ss_dssp CSSCSSCCCEEEEE--TTEEEEECSSSEEEE-------------EEESSTTCCGGGCCTT------CCCEEEEEEEECS-
T ss_pred ccCCcceEEEEEEc--CCEEEEEecCCEEEE-------------EeCCCccccccccccC------Ccchheecccccc-
Confidence 388999999999 789999999999999 9988765410000000 0000011112222
Q ss_pred CCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC--CCcccceEE
Q psy467 218 PGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ--SPMLCFILT 295 (845)
Q Consensus 218 ~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd--g~~~~~~lL 295 (845)
...+++++|+|+ ++ +|
T Consensus 285 ---------------------------------------------------------~~~v~~~~~s~~~~~~-----~l 302 (366)
T 3k26_A 285 ---------------------------------------------------------QCDIWYMRFSMDFWQK-----ML 302 (366)
T ss_dssp ---------------------------------------------------------SCCSSCCCCEECTTSS-----EE
T ss_pred ---------------------------------------------------------CCcEEEEEEcCCCCCc-----EE
Confidence 134556666666 66 99
Q ss_pred EEEeCCCeEEEEECCCCe----EEEEecCC--CCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 296 TSSSADRTVNFWDLEKFS----LVSTTEKN--SSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 296 atgs~DG~I~IWDl~s~~----~l~tl~gh--~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
++|+.||.|++||+.+++ ....+.+| ...|++++|+|+|++|++++.|| |++||+.+
T Consensus 303 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 303 ALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 999999999999999874 55577777 78999999999999999999999 99999853
No 78
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.98 E-value=1.7e-30 Score=287.56 Aligned_cols=266 Identities=18% Similarity=0.233 Sum_probs=220.4
Q ss_pred cceeeeeE------Ee--ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCC---CCCeEEEEEcCCC
Q psy467 2 RAKVEKAE------DF--MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGH---STPVESVQFGNGE 70 (845)
Q Consensus 2 ~irlw~l~------~L--~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h---~~~V~sLafSpdg 70 (845)
.+++|++. .+ .+|.+.|.+++|+|+++++|++++.|+.|++||+.+ ..+..+..| ...|.+++|+|++
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~ 175 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSR 175 (383)
T ss_dssp CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTT
T ss_pred eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCC
Confidence 36777742 33 379999999999996679999999999999999986 555555444 4889999999999
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCC-EEEEEECCCeEEEEECCC----CceEEEEcCCCCCe
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWDLRR----KGCIYTYRGHSKSI 145 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~-~Lasgs~DG~I~IWDl~t----~~~l~~~~~h~~~V 145 (845)
++|++|+.|+.|++||+ +++.+..+..|...|.+++|+|+++ +|++++.|+.|++||+++ +.++..+ .|...|
T Consensus 176 ~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v 253 (383)
T 3ei3_B 176 QMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPV 253 (383)
T ss_dssp TEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCE
T ss_pred CEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCce
Confidence 99999999999999999 5788889999999999999999998 999999999999999987 6667666 589999
Q ss_pred EEEEEec-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 146 NSIRFSP-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 146 ~sLafSP-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
.+++|+| ++++|++++.|+.|++ ||+++++. +..+.+|...
T Consensus 254 ~~~~~s~~~~~~l~~~~~d~~i~i-------------wd~~~~~~--------------------~~~~~~~~~~----- 295 (383)
T 3ei3_B 254 NAAYFNPTDSTKLLTTDQRNEIRV-------------YSSYDWSK--------------------PDQIIIHPHR----- 295 (383)
T ss_dssp EEEEECTTTSCEEEEEESSSEEEE-------------EETTBTTS--------------------CSEEEECCBC-----
T ss_pred EEEEEcCCCCCEEEEEcCCCcEEE-------------EECCCCcc--------------------cccccccccc-----
Confidence 9999999 9999999999999999 99998877 3333333222
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
.. .........|+|++. +..++|+|+++ + +|+.|+.|
T Consensus 296 --~~---------------------~~~~~~~~~~~p~~~-------------~~~~~~s~dg~-----~--s~s~d~~i 332 (383)
T 3ei3_B 296 --QF---------------------QHLTPIKATWHPMYD-------------LIVAGRYPDDQ-----L--LLNDKRTI 332 (383)
T ss_dssp --CC---------------------TTSCCCCCEECSSSS-------------EEEEECBCCTT-----T--CTTCCCCE
T ss_pred --cc---------------------ccccceEEeccCCCC-------------ceEEEecCCcc-----c--ccCCCCeE
Confidence 00 000002346777655 56788889987 5 88899999
Q ss_pred EEEECCCCeEEEEecC--CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 305 NFWDLEKFSLVSTTEK--NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~g--h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
++||+.+++++..+.+ |...+.+++|+|+|++|++|+ |+ |+|||+++
T Consensus 333 ~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 333 DIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred EEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 9999999999999987 457788889999999999997 78 99999864
No 79
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.98 E-value=1.7e-29 Score=269.84 Aligned_cols=277 Identities=21% Similarity=0.301 Sum_probs=219.7
Q ss_pred EEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec--CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE
Q psy467 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS--GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 18 V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~--~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~ 95 (845)
.++|+||+ ++ +||+|. |++|+|||+.+++.+..+. +|...|.+++|+|++++|++|+.||+|++||+++++.+..
T Consensus 28 ~~~l~WS~-~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 28 LNLVDWSS-GN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp CBCEEECT-TS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceEEEECC-CC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 57899998 54 777765 8999999999999887764 6788899999999999999999999999999999999999
Q ss_pred EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeecc
Q psy467 96 LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHL 174 (845)
Q Consensus 96 l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~ 174 (845)
+.+|...+.++.+ ++..+++++.++.+++|+.... ..+..+.+|...+.++.++++++++++++.||.|++
T Consensus 105 ~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i------ 176 (318)
T 4ggc_A 105 MTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNV------ 176 (318)
T ss_dssp EECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE------
T ss_pred ecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeE------
Confidence 9999988876555 5679999999999999999765 456778889999999999999999999999999999
Q ss_pred CCceeEEEECCCCccCCCC------CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 175 TNTSIHVVDLSLVHPLGTP------PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 175 ~~~~I~vWDl~tg~~l~~~------~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
||+++++..... ....+..+.+.+++..+......... ..+.+|+....
T Consensus 177 -------wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~i~lwd~~~~--------------- 231 (318)
T 4ggc_A 177 -------WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD---RHIRIWNVCSG--------------- 231 (318)
T ss_dssp -------EESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT---CEEEEEETTTC---------------
T ss_pred -------EECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC---CEEEEEecccc---------------
Confidence 999887653322 13455667777766544433222211 12223221110
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEE--eCCCeEEEEECCCCeEEEEecCCCCCEE
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS--SADRTVNFWDLEKFSLVSTTEKNSSTIR 326 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg--s~DG~I~IWDl~s~~~l~tl~gh~~~Vt 326 (845)
. ..........+..++|+|++. .++++ +.|+.|++||+.+++++.++.+|.+.|+
T Consensus 232 ------~------------~~~~~~~~~~v~~~~~~~~~~-----~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~ 288 (318)
T 4ggc_A 232 ------A------------CLSAVDAHSQVCSILWSPHYK-----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVL 288 (318)
T ss_dssp ------C------------EEEEEECSSCEEEEEEETTTT-----EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEE
T ss_pred ------c------------ccccccceeeeeeeeeccccc-----ceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEE
Confidence 0 001112234577888888887 55544 4799999999999999999999999999
Q ss_pred EEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 327 RLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 327 slafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
+++|+|+|++||+|+.|+ |+|||+...
T Consensus 289 ~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 289 SLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 999999999999999999 999998653
No 80
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.98 E-value=1.6e-29 Score=286.37 Aligned_cols=262 Identities=19% Similarity=0.306 Sum_probs=210.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEE
Q psy467 57 HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIY 136 (845)
Q Consensus 57 h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~ 136 (845)
....+.++.++ +++|++|+.||.|++||+.+++.+..+.+|...|.+++|+ ++++++|+.||.|++||+.+++.+.
T Consensus 118 ~~~v~~~~~~~--g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~ 193 (445)
T 2ovr_B 118 DDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIH 193 (445)
T ss_dssp TTSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCcEEEEEEc--CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEE
Confidence 34557788888 6799999999999999999999999999999999999998 6799999999999999999999999
Q ss_pred EEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC--CCCCcceeecCCCCeEEEEe
Q psy467 137 TYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP--PQYTSSVPFSHNTSLRKSFT 214 (845)
Q Consensus 137 ~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~--~~~i~svs~spdg~~l~~~~ 214 (845)
.+.+|...|.+++|+ ++.+++++.||.|++ ||+.+++.+.... ...+.++.+ ++..+....
T Consensus 194 ~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~-------------wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~ 256 (445)
T 2ovr_B 194 TLYGHTSTVRCMHLH--EKRVVSGSRDATLRV-------------WDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGA 256 (445)
T ss_dssp EECCCSSCEEEEEEE--TTEEEEEETTSEEEE-------------EESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEE
T ss_pred EECCCCCcEEEEEec--CCEEEEEeCCCEEEE-------------EECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEc
Confidence 999999999999997 678999999999999 9999998854432 344555555 444444322
Q ss_pred cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceE
Q psy467 215 KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFIL 294 (845)
Q Consensus 215 ~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~l 294 (845)
. ++.+.+|++.... ....+ ..+...+.+++| ++. +
T Consensus 257 ~------dg~i~iwd~~~~~--------------------~~~~~------------~~~~~~v~~~~~--~~~-----~ 291 (445)
T 2ovr_B 257 Y------DFMVKVWDPETET--------------------CLHTL------------QGHTNRVYSLQF--DGI-----H 291 (445)
T ss_dssp T------TSCEEEEEGGGTE--------------------EEEEE------------CCCSSCEEEEEE--CSS-----E
T ss_pred C------CCEEEEEECCCCc--------------------EeEEe------------cCCCCceEEEEE--CCC-----E
Confidence 1 1122333322110 00011 122356778888 566 8
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecC---CCCCeEEEE
Q psy467 295 TTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPM---GWGKVQDLA 370 (845)
Q Consensus 295 Latgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~---h~~~VtsVa 370 (845)
+++|+.||.|++||+.+++++..+.+|...+.++.++ +.+|++|+.|+ |++||+.+++.+..+.. |...|++++
T Consensus 292 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 369 (445)
T 2ovr_B 292 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQ 369 (445)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEE
Confidence 9999999999999999999999999999999988875 66999999999 99999999999999886 888999999
Q ss_pred EcCCceEEEE-----EEEEeeC
Q psy467 371 VTGTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 371 fSdg~lLaaS-----VsiW~~d 387 (845)
|++ ++++++ |.+|...
T Consensus 370 ~~~-~~l~s~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 370 FNK-NFVITSSDDGTVKLWDLK 390 (445)
T ss_dssp ECS-SEEEEEETTSEEEEEETT
T ss_pred ECC-CEEEEEeCCCeEEEEECC
Confidence 974 555555 9999765
No 81
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=4.2e-30 Score=300.18 Aligned_cols=275 Identities=16% Similarity=0.240 Sum_probs=244.0
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC----eeEEEecCCCCC-eEEEEEcC--CCCEEEEEECCCcEEE
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS----NCIMSLSGHSTP-VESVQFGN--GEETLSAGCQSGSIKI 84 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~----~~i~~l~~h~~~-V~sLafSp--dg~~LaSgs~DGtV~V 84 (845)
..|.+.|.+++|+| ++++||+++ ++.|++|++.++ +....+.+|... |.+++|+| ++++|++|+.||.|++
T Consensus 15 ~~~~~~v~~~~~sp-dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~v 92 (615)
T 1pgu_A 15 STQRNFTTHLSYDP-TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIV 92 (615)
T ss_dssp CCCTTCCCCCEEET-TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEE
T ss_pred CCccCceeEEEECC-CCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEE
Confidence 46899999999999 999999998 789999999998 899999999999 99999999 9999999999999999
Q ss_pred EECCCC--------cEEEEEcCCCCCeEEEEEccCCCEEEEEECC----CeEEEEECCCCceEEEEcCCCCCeEEEEEec
Q psy467 85 WNLAVP--------TVQRTLNGHKSSITSVDFHPYGDYLCSGSLD----SFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 85 WDl~tg--------~~v~~l~~h~~~V~~lafspdg~~Lasgs~D----G~I~IWDl~t~~~l~~~~~h~~~V~sLafSP 152 (845)
||+.++ +....+..|...|.+++|+|++++|++++.+ +.|++|| .++.+..+..|...|.+++|+|
T Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~ 170 (615)
T 1pgu_A 93 WGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQ 170 (615)
T ss_dssp EEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECS
T ss_pred EeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECC
Confidence 999754 6777888899999999999999999999987 6888888 5678889999999999999999
Q ss_pred CCC-EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCC---CCccceeeEe
Q psy467 153 DGQ-WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRP---GGTKAKIDVT 228 (845)
Q Consensus 153 dg~-~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~---~~~~~~i~V~ 228 (845)
+++ .+++++.|+.|++ ||+.+++. +..+.+|.. . +
T Consensus 171 ~~~~~l~~~~~d~~v~v-------------wd~~~~~~--------------------~~~~~~~~~~~~~-------v- 209 (615)
T 1pgu_A 171 SRPMRSMTVGDDGSVVF-------------YQGPPFKF--------------------SASDRTHHKQGSF-------V- 209 (615)
T ss_dssp SSSCEEEEEETTTEEEE-------------EETTTBEE--------------------EEEECSSSCTTCC-------E-
T ss_pred CCCcEEEEEeCCCcEEE-------------EeCCCcce--------------------eeeecccCCCCce-------E-
Confidence 998 8999999999999 99887776 556655554 3 4
Q ss_pred eecccccccccccchhhhhhccCCCceeEEEcCC-CCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEE
Q psy467 229 RIEENAESEDQAGEEELFATIANPCDYSAIFQPH-RSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFW 307 (845)
Q Consensus 229 ~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspd-g~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IW 307 (845)
.+++|+|+ +. +|++++.||.|++|
T Consensus 210 --------------------------~~~~~~~~~~~-----------------------------~l~~~~~dg~i~vw 234 (615)
T 1pgu_A 210 --------------------------RDVEFSPDSGE-----------------------------FVITVGSDRKISCF 234 (615)
T ss_dssp --------------------------EEEEECSTTCC-----------------------------EEEEEETTCCEEEE
T ss_pred --------------------------EEEEECCCCCC-----------------------------EEEEEeCCCeEEEE
Confidence 55555555 55 99999999999999
Q ss_pred ECCCCeEEEEe-c---CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCC----CCCeEEEEEcCCceEE
Q psy467 308 DLEKFSLVSTT-E---KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMG----WGKVQDLAVTGTQLWF 378 (845)
Q Consensus 308 Dl~s~~~l~tl-~---gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h----~~~VtsVafSdg~lLa 378 (845)
|+.+++.+..+ . .|...|.+++|+ ++++|++++.|+ |++||+.+++.+..+..+ ...+.++.|+++.+++
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 313 (615)
T 1pgu_A 235 DGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRII 313 (615)
T ss_dssp ETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEE
T ss_pred ECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEE
Confidence 99999999999 6 899999999999 999999999999 999999999999888877 3678899998666666
Q ss_pred EE-----EEEEeeC
Q psy467 379 RR-----VGTWSHQ 387 (845)
Q Consensus 379 aS-----VsiW~~d 387 (845)
++ +.+|...
T Consensus 314 ~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 314 SLSLDGTLNFYELG 327 (615)
T ss_dssp EEETTSCEEEEETT
T ss_pred EEECCCCEEEEECC
Confidence 66 8999765
No 82
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=3.8e-30 Score=288.20 Aligned_cols=257 Identities=20% Similarity=0.331 Sum_probs=215.1
Q ss_pred ceeeee------EEecc-CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 3 AKVEKA------EDFMA-HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 3 irlw~l------~~L~g-H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
+++|++ +.+.. |.+.|.+++|+| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+ +++|++
T Consensus 115 v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~ 191 (401)
T 4aez_A 115 VYVWNADSGSVSALAETDESTYVASVKWSH-DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSS 191 (401)
T ss_dssp EEEEETTTCCEEEEEECCTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEE
T ss_pred EEEeeCCCCcEeEeeecCCCCCEEEEEECC-CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEE
Confidence 567763 23443 899999999999 99999999999999999999999999999999999999994 679999
Q ss_pred EECCCcEEEEECC-CCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCC
Q psy467 76 GCQSGSIKIWNLA-VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154 (845)
Q Consensus 76 gs~DGtV~VWDl~-tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg 154 (845)
|+.||.|++||+. .+..+..+.+|...|.+++|+|++++|++|+.||.|++||++++..+..+..|...|.+++|+|++
T Consensus 192 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~ 271 (401)
T 4aez_A 192 GSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQ 271 (401)
T ss_dssp EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTS
T ss_pred EcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCC
Confidence 9999999999999 567788888999999999999999999999999999999999999999999999999999999976
Q ss_pred C-EEEEEe--CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 155 Q-WIASGG--EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 155 ~-~Lasgs--~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
. ++++++ .|+.|++ ||+.+++. +..+..+ .. +
T Consensus 272 ~~ll~~~~gs~d~~i~i-------------~d~~~~~~--------------------~~~~~~~-~~-------v---- 306 (401)
T 4aez_A 272 SNLLATGGGTMDKQIHF-------------WNAATGAR--------------------VNTVDAG-SQ-------V---- 306 (401)
T ss_dssp TTEEEEECCTTTCEEEE-------------EETTTCCE--------------------EEEEECS-SC-------E----
T ss_pred CCEEEEecCCCCCEEEE-------------EECCCCCE--------------------EEEEeCC-Cc-------E----
Confidence 4 566654 7999999 99998776 4444321 12 3
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEE--EeCCCeEEEEEC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTS--SSADRTVNFWDL 309 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLat--gs~DG~I~IWDl 309 (845)
..++|+|++. ++++ |+.||.|++||+
T Consensus 307 -----------------------~~~~~s~~~~-----------------------------~l~~~~g~~dg~i~v~~~ 334 (401)
T 4aez_A 307 -----------------------TSLIWSPHSK-----------------------------EIMSTHGFPDNNLSIWSY 334 (401)
T ss_dssp -----------------------EEEEECSSSS-----------------------------EEEEEECTTTCEEEEEEE
T ss_pred -----------------------EEEEECCCCC-----------------------------eEEEEeecCCCcEEEEec
Confidence 4555555555 7777 448999999999
Q ss_pred CCCeEEE--EecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe
Q psy467 310 EKFSLVS--TTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 310 ~s~~~l~--tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl 359 (845)
.++.... .+.+|...|.+++|+|+|++|++++.|| |++|++.+++.+...
T Consensus 335 ~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 335 SSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp ETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred CCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 9865544 4678999999999999999999999999 999999998877554
No 83
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.98 E-value=1.2e-29 Score=286.27 Aligned_cols=265 Identities=21% Similarity=0.340 Sum_probs=218.5
Q ss_pred cceeeee--------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEE
Q psy467 2 RAKVEKA--------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73 (845)
Q Consensus 2 ~irlw~l--------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~L 73 (845)
++++|++ ..+.+|...|+||+|+| +|++||+|+.||.|+|||+.+++.+..+.+|...|.+++|+ +..|
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l 202 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYIL 202 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECC-CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEE
Confidence 4678873 24557888999999999 99999999999999999999999999999999999998885 6799
Q ss_pred EEEECCCcEEEEECCCC-cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc----eEEEEcCCCCCeEEE
Q psy467 74 SAGCQSGSIKIWNLAVP-TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG----CIYTYRGHSKSINSI 148 (845)
Q Consensus 74 aSgs~DGtV~VWDl~tg-~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~----~l~~~~~h~~~V~sL 148 (845)
++|+.|+.+++||.... ..+..+.+|...+..+.|+|+++++++++.|+.|++|+..+++ .+.....|...|.++
T Consensus 203 ~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~ 282 (420)
T 4gga_A 203 SSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAV 282 (420)
T ss_dssp EEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEE
T ss_pred EEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeee
Confidence 99999999999999864 5667888999999999999999999999999999999998764 456677899999999
Q ss_pred EEecCC-CEEEEE--eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 149 RFSPDG-QWIASG--GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 149 afSPdg-~~Lasg--s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
+|+|++ ..++++ +.|+.|++ ||+.++.. +..+..+..
T Consensus 283 ~~~p~~~~~la~~~gs~D~~I~i-------------wd~~t~~~--------------------~~~~~~~~~------- 322 (420)
T 4gga_A 283 AWCPWQSNVLATGGGTSDRHIRI-------------WNVCSGAC--------------------LSAVDAHSQ------- 322 (420)
T ss_dssp EECTTCTTEEEEEECTTTCEEEE-------------EETTTTEE--------------------EEEEECSSC-------
T ss_pred eeCCCcccEEEEEeecCCCEEEE-------------EeCCcccc--------------------ceeeccccc-------
Confidence 999965 455554 47999999 99998887 555444332
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe--CCCe
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS--ADRT 303 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs--~DG~ 303 (845)
+ ..+.|++++. .+++++ .|+.
T Consensus 323 -v---------------------------~~~~~~~~~~-----------------------------~lv~~sg~~d~~ 345 (420)
T 4gga_A 323 -V---------------------------CSILWSPHYK-----------------------------ELISGHGFAQNQ 345 (420)
T ss_dssp -E---------------------------EEEEEETTTT-----------------------------EEEEEECTTTCC
T ss_pred -e---------------------------eeeeecCCCC-----------------------------eEEEEEecCCCE
Confidence 2 5566666655 565544 7999
Q ss_pred EEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCe
Q psy467 304 VNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKV 366 (845)
Q Consensus 304 I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~V 366 (845)
|+|||+.+++++.++.+|.+.|++++|+|||++|++|+.|+ |+|||+...........+...+
T Consensus 346 I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~ 409 (420)
T 4gga_A 346 LVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASA 409 (420)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC----------
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCc
Confidence 99999999999999999999999999999999999999999 9999998766555554444433
No 84
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=1.1e-29 Score=273.09 Aligned_cols=255 Identities=18% Similarity=0.237 Sum_probs=206.2
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC--CcEEEEEcCCCCCeEEEEEcc--CCCEEEEEECCCeEEEE
Q psy467 52 MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV--PTVQRTLNGHKSSITSVDFHP--YGDYLCSGSLDSFIKLW 127 (845)
Q Consensus 52 ~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t--g~~v~~l~~h~~~V~~lafsp--dg~~Lasgs~DG~I~IW 127 (845)
..+.+|...|.+++|+|+|++||+|+.|++|+|||+.+ .+.+..+.+|.+.|.+++|++ ++++|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 45778999999999999999999999999999999974 367788999999999999986 38999999999999999
Q ss_pred ECCCCc--eEEEEcCCCCCeEEEEEecC--CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceee
Q psy467 128 DLRRKG--CIYTYRGHSKSINSIRFSPD--GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPF 203 (845)
Q Consensus 128 Dl~t~~--~l~~~~~h~~~V~sLafSPd--g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~ 203 (845)
|+++++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++ ||++++....
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~-------------wd~~~~~~~~------------ 137 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSV-------------VEFKENGTTS------------ 137 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE-------------EEBCSSSCBC------------
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEE-------------EEecCCCcee------------
Confidence 998774 56777889999999999997 899999999999999 9998654200
Q ss_pred cCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEE
Q psy467 204 SHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSI 283 (845)
Q Consensus 204 spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slaf 283 (845)
...+.+|... + .+++|+|++.... .....
T Consensus 138 ------~~~~~~h~~~-------v---------------------------~~~~~~p~~~~~~-----------~~~~~ 166 (297)
T 2pm7_B 138 ------PIIIDAHAIG-------V---------------------------NSASWAPATIEED-----------GEHNG 166 (297)
T ss_dssp ------CEEEECCSSC-------E---------------------------EEEEECCCC--------------------
T ss_pred ------eeeeecccCc-------c---------------------------ceEeecCCccccc-----------ccCCC
Confidence 2334556655 5 6777777643100 00001
Q ss_pred cCCCCcccceEEEEEeCCCeEEEEECCCCe----EEEEecCCCCCEEEEEEeCCC---CEEEEEeCCC-EEEEEecCCc-
Q psy467 284 LPQSPMLCFILTTSSSADRTVNFWDLEKFS----LVSTTEKNSSTIRRLTFSEGG---ECLLGGDTEG-LKVYGWEPAR- 354 (845)
Q Consensus 284 SPdg~~~~~~lLatgs~DG~I~IWDl~s~~----~l~tl~gh~~~VtslafSpdG---~~Lasgs~DG-I~IWDl~tgk- 354 (845)
.++++ +|++|+.|+.|++||+++++ +..++.+|...|.+++|+|++ .+||+++.|+ |+|||++++.
T Consensus 167 ~~~~~-----~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~ 241 (297)
T 2pm7_B 167 TKESR-----KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG 241 (297)
T ss_dssp ---CC-----EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred CCCcc-----eEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC
Confidence 12344 89999999999999998765 677889999999999999985 8999999999 9999998753
Q ss_pred --eEEEe--cCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 355 --QYDAQ--PMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 355 --~l~tl--~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
....+ ..|...|.+++|+ ++++|+++ |.+|...
T Consensus 242 ~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred ccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 12233 4678899999999 89888877 9999765
No 85
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=1.7e-29 Score=306.55 Aligned_cols=288 Identities=16% Similarity=0.264 Sum_probs=249.1
Q ss_pred ceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEE
Q psy467 3 AKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAG 76 (845)
Q Consensus 3 irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSg 76 (845)
+++|+ ++.+.+|.+.|++++|+| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++.+|+++
T Consensus 37 v~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 115 (814)
T 3mkq_A 37 VEIWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSG 115 (814)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEE
T ss_pred EEEEECCCCceEEEEecCCCcEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEE
Confidence 56777 367889999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ECCCcEEEEECCCC-cEEEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEEcCCC-CCeEEEEEec-
Q psy467 77 CQSGSIKIWNLAVP-TVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS-KSINSIRFSP- 152 (845)
Q Consensus 77 s~DGtV~VWDl~tg-~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~-~~V~sLafSP- 152 (845)
+.||.|++||+.++ .....+.+|...|.+++|+| +++.|++++.||.|++||+.++.....+..+. ..+.+++|+|
T Consensus 116 ~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 195 (814)
T 3mkq_A 116 SDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL 195 (814)
T ss_dssp ETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCS
T ss_pred cCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEEC
Confidence 99999999999987 67788888999999999999 88999999999999999999888877776554 8899999999
Q ss_pred -CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 153 -DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 153 -dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
++.++++++.||.|++ ||+.+++. +..+.+|... +
T Consensus 196 ~~~~~l~~~~~dg~i~~-------------~d~~~~~~--------------------~~~~~~~~~~-------v---- 231 (814)
T 3mkq_A 196 PDKPYMITASDDLTIKI-------------WDYQTKSC--------------------VATLEGHMSN-------V---- 231 (814)
T ss_dssp TTCCEEEEECTTSEEEE-------------EETTTTEE--------------------EEEEECCSSC-------E----
T ss_pred CCCCEEEEEeCCCEEEE-------------EECCCCcE--------------------EEEEcCCCCC-------E----
Confidence 9999999999999999 99988776 6666666555 5
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK 311 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s 311 (845)
.+++|+|++. ++++++.||.|++||+.+
T Consensus 232 -----------------------~~~~~~~~~~-----------------------------~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 232 -----------------------SFAVFHPTLP-----------------------------IIISGSEDGTLKIWNSST 259 (814)
T ss_dssp -----------------------EEEEECSSSS-----------------------------EEEEEETTSCEEEEETTT
T ss_pred -----------------------EEEEEcCCCC-----------------------------EEEEEeCCCeEEEEECCC
Confidence 5666666666 999999999999999999
Q ss_pred CeEEEEecCCCCCEEEEEEeCCCC--EEEEEeCCCEEEEEecCCce----------EE----------------------
Q psy467 312 FSLVSTTEKNSSTIRRLTFSEGGE--CLLGGDTEGLKVYGWEPARQ----------YD---------------------- 357 (845)
Q Consensus 312 ~~~l~tl~gh~~~VtslafSpdG~--~Lasgs~DGI~IWDl~tgk~----------l~---------------------- 357 (845)
++.+..+..|...+.+++|+|+|. ++++++.+++.+|++..+.. +.
T Consensus 260 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (814)
T 3mkq_A 260 YKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEV 339 (814)
T ss_dssp CSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCC
T ss_pred CcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeeccccccc
Confidence 999999999999999999999987 57777766688888764321 11
Q ss_pred -----------EecCCCCCeEEEEEc-CCceEEEE----EEEEeeC
Q psy467 358 -----------AQPMGWGKVQDLAVT-GTQLWFRR----VGTWSHQ 387 (845)
Q Consensus 358 -----------tl~~h~~~VtsVafS-dg~lLaaS----VsiW~~d 387 (845)
.+..+...+++++|+ +|++++++ +.+|...
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~ 385 (814)
T 3mkq_A 340 EQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTAL 385 (814)
T ss_dssp CSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEETTEEEEEETT
T ss_pred ccCccceeeeecCCCCccCCceeEECCCCCEEEEecCCEEEEEECc
Confidence 112344568899999 99988887 7788743
No 86
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.2e-31 Score=311.19 Aligned_cols=289 Identities=11% Similarity=0.070 Sum_probs=221.6
Q ss_pred cceeeee----------EEeccCCCcEEEEEEecC-----CCCEEEEEeCCCeEEEEECCCCee-----------EEEec
Q psy467 2 RAKVEKA----------EDFMAHGASVNCLALGKK-----SGQVLATGGDDKKVNLWALGKSNC-----------IMSLS 55 (845)
Q Consensus 2 ~irlw~l----------~~L~gH~~~V~~LafSp~-----dg~~LaTgs~DG~I~IWdl~t~~~-----------i~~l~ 55 (845)
++++|++ ..+.+|.+.|.+++|+|+ ++.+||+++.||+|+|||+.++.. ...+.
T Consensus 184 tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~ 263 (524)
T 2j04_B 184 CIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLS 263 (524)
T ss_dssp EEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEEC
T ss_pred eEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEE
Confidence 3678875 236678899999999993 267999999999999999976532 34678
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC-cEEEEEcCCCCCeEEE--EEccCC-CEEEEEECCCeEEEEECCC
Q psy467 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP-TVQRTLNGHKSSITSV--DFHPYG-DYLCSGSLDSFIKLWDLRR 131 (845)
Q Consensus 56 ~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg-~~v~~l~~h~~~V~~l--afspdg-~~Lasgs~DG~I~IWDl~t 131 (845)
+|...|++++|+++ ..|++|+.||+|++||++++ .+...+.+|...|.++ +|++++ .+|++|+.|++|++||+++
T Consensus 264 ~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 264 LADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp CTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG
T ss_pred cCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC
Confidence 89999999999986 48999999999999999976 3456688899999999 578887 8999999999999999998
Q ss_pred CceEEEEcCCCC--CeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCe
Q psy467 132 KGCIYTYRGHSK--SINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSL 209 (845)
Q Consensus 132 ~~~l~~~~~h~~--~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~ 209 (845)
++++..+.+|.. .|.+++|+|+++.+++++.|++|++ ||++++.+
T Consensus 343 ~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~l-------------wd~~~~~~-------------------- 389 (524)
T 2j04_B 343 IATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRA-------------VPSRAAFA-------------------- 389 (524)
T ss_dssp HHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEE-------------EETTCTTC--------------------
T ss_pred CCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEE-------------EECccccc--------------------
Confidence 887766666543 5889999999999999999999999 99998776
Q ss_pred EEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCc
Q psy467 210 RKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPM 289 (845)
Q Consensus 210 l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~ 289 (845)
+..+.+|... | .+++|+|++.
T Consensus 390 ~~~l~gH~~~-------V---------------------------~sva~Sp~g~------------------------- 410 (524)
T 2j04_B 390 VHPLVSRETT-------I---------------------------TAIGVSRLHP------------------------- 410 (524)
T ss_dssp CEEEEECSSC-------E---------------------------EEEECCSSCC-------------------------
T ss_pred ceeeecCCCc-------e---------------------------EEEEeCCCCC-------------------------
Confidence 5666677666 6 6666666666
Q ss_pred ccceEEEEEeCCCeEEEEECCCCeEEEEecC-----CCCCEEEEEEeCCCCEEEEEeCCCEEEEEec-CCceEEEecCCC
Q psy467 290 LCFILTTSSSADRTVNFWDLEKFSLVSTTEK-----NSSTIRRLTFSEGGECLLGGDTEGLKVYGWE-PARQYDAQPMGW 363 (845)
Q Consensus 290 ~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g-----h~~~VtslafSpdG~~Lasgs~DGI~IWDl~-tgk~l~tl~~h~ 363 (845)
+|++|+.||+|++||+..+ .+..... +...|.+++|+|+|..+.. .+++.+|++. ++.++..+.+|.
T Consensus 411 ----~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~--~~~~~~~~~~~~g~~~~~l~gh~ 483 (524)
T 2j04_B 411 ----MVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYRI--DSSYEVYPLTVNDVSKAKIDAHG 483 (524)
T ss_dssp ----BCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEEE--CCCCCCCC-------------CC
T ss_pred ----eEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEEc--cCCceecccccCCcceeeecCCC
Confidence 8999999999999998654 2111111 1124789999999996532 3344556554 567888899999
Q ss_pred CCeEEEEEc-CC---ceEEEE-----EEEEeeCCCC
Q psy467 364 GKVQDLAVT-GT---QLWFRR-----VGTWSHQDSG 390 (845)
Q Consensus 364 ~~VtsVafS-dg---~lLaaS-----VsiW~~d~~~ 390 (845)
..|++|+|+ ++ .++|++ |.+|.++++.
T Consensus 484 ~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 484 INITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEH 519 (524)
T ss_dssp CSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC-
T ss_pred ceEEEEECCCCCCccHHHHhhccCceEEEEEccccc
Confidence 999999999 64 488887 9999988764
No 87
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=6.9e-30 Score=279.13 Aligned_cols=249 Identities=14% Similarity=0.236 Sum_probs=212.9
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
++.+.+|.+.|.+++|+| ++++|++++.||.|++||+.+++.... +..|...|.+++|+|++++|++++.||.|++|
T Consensus 45 ~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~ 123 (372)
T 1k8k_C 45 VHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISIC 123 (372)
T ss_dssp EEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEE
T ss_pred eeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEE
Confidence 466889999999999999 999999999999999999988875444 46799999999999999999999999999999
Q ss_pred ECCCCcE---EEE-EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEEC------------------CCCceEEEEcCCCC
Q psy467 86 NLAVPTV---QRT-LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL------------------RRKGCIYTYRGHSK 143 (845)
Q Consensus 86 Dl~tg~~---v~~-l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl------------------~t~~~l~~~~~h~~ 143 (845)
|+..+.. ... ...|...|.+++|+|++++|++++.||.|++||+ ..++.+..+..|..
T Consensus 124 d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (372)
T 1k8k_C 124 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG 203 (372)
T ss_dssp EEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS
T ss_pred EecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCC
Confidence 9998762 333 3668899999999999999999999999999995 36788889989999
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccc
Q psy467 144 SINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKA 223 (845)
Q Consensus 144 ~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~ 223 (845)
.|.+++|+|++++|++++.||.|++ ||+++++. +..+..|...
T Consensus 204 ~v~~~~~~~~~~~l~~~~~d~~i~i-------------~d~~~~~~--------------------~~~~~~~~~~---- 246 (372)
T 1k8k_C 204 WVHGVCFSANGSRVAWVSHDSTVCL-------------ADADKKMA--------------------VATLASETLP---- 246 (372)
T ss_dssp CEEEEEECSSSSEEEEEETTTEEEE-------------EEGGGTTE--------------------EEEEECSSCC----
T ss_pred eEEEEEECCCCCEEEEEeCCCEEEE-------------EECCCCce--------------------eEEEccCCCC----
Confidence 9999999999999999999999999 99998777 6666665544
Q ss_pred eeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCe
Q psy467 224 KIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRT 303 (845)
Q Consensus 224 ~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~ 303 (845)
+ ..++|+|++. ++++| .|+.
T Consensus 247 ---v---------------------------~~~~~~~~~~-----------------------------~l~~~-~d~~ 266 (372)
T 1k8k_C 247 ---L---------------------------LAVTFITESS-----------------------------LVAAG-HDCF 266 (372)
T ss_dssp ---E---------------------------EEEEEEETTE-----------------------------EEEEE-TTSS
T ss_pred ---e---------------------------EEEEEecCCC-----------------------------EEEEE-eCCe
Confidence 4 5566666655 78777 8999
Q ss_pred EEEEECCC--CeE--E------------------------------------EEe-cCCCCCEEEEEEe-CCC---CEEE
Q psy467 304 VNFWDLEK--FSL--V------------------------------------STT-EKNSSTIRRLTFS-EGG---ECLL 338 (845)
Q Consensus 304 I~IWDl~s--~~~--l------------------------------------~tl-~gh~~~VtslafS-pdG---~~La 338 (845)
|++||+.+ ++. + ..+ .+|...|++++|+ ++| .+|+
T Consensus 267 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~ 346 (372)
T 1k8k_C 267 PVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFC 346 (372)
T ss_dssp CEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEE
T ss_pred EEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEE
Confidence 99999987 421 0 223 3899999999966 677 9999
Q ss_pred EEeCCC-EEEEEecCCc
Q psy467 339 GGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 339 sgs~DG-I~IWDl~tgk 354 (845)
+|+.|| |++|++.+++
T Consensus 347 s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 347 TTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp EEETTSEEEEEEHHHHH
T ss_pred EecCCCceEEEEecChh
Confidence 999999 9999998754
No 88
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=4.3e-30 Score=278.72 Aligned_cols=262 Identities=18% Similarity=0.314 Sum_probs=212.1
Q ss_pred ceeeeeE-------EeccCCCcEEEEEEecCC--CCEEEEEeCCCeEEEEECCCCe-eEEEecCCCCCeEEEEE------
Q psy467 3 AKVEKAE-------DFMAHGASVNCLALGKKS--GQVLATGGDDKKVNLWALGKSN-CIMSLSGHSTPVESVQF------ 66 (845)
Q Consensus 3 irlw~l~-------~L~gH~~~V~~LafSp~d--g~~LaTgs~DG~I~IWdl~t~~-~i~~l~~h~~~V~sLaf------ 66 (845)
+++|++. ...+|.+.|.+++|+|+. +.+|++|+.||.|++||+.+++ .+..+.+|...|.+++|
T Consensus 46 v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 125 (357)
T 3i2n_A 46 IQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGI 125 (357)
T ss_dssp EEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGC
T ss_pred EEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeecccccc
Confidence 6777753 233799999999999932 7999999999999999999888 88999999999999955
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCc-EEEEEcCCCC----CeEEEE----EccCCCEEEEEECCCeEEEEECCCCceEEE
Q psy467 67 GNGEETLSAGCQSGSIKIWNLAVPT-VQRTLNGHKS----SITSVD----FHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137 (845)
Q Consensus 67 Spdg~~LaSgs~DGtV~VWDl~tg~-~v~~l~~h~~----~V~~la----fspdg~~Lasgs~DG~I~IWDl~t~~~l~~ 137 (845)
+|++++|++++.||.|++||+.+++ .+..+..|.+ .+.+++ |+|++++|++++.||.|++||+++++....
T Consensus 126 s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 205 (357)
T 3i2n_A 126 GEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE 205 (357)
T ss_dssp C-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee
Confidence 6799999999999999999999886 6777765554 788998 788999999999999999999999887555
Q ss_pred EcCCCCCeEEEEEec---CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe
Q psy467 138 YRGHSKSINSIRFSP---DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT 214 (845)
Q Consensus 138 ~~~h~~~V~sLafSP---dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~ 214 (845)
..|...|.+++|+| ++++|++++.||.|++ ||+++++...... ...+.
T Consensus 206 -~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i-------------~d~~~~~~~~~~~---------------~~~~~ 256 (357)
T 3i2n_A 206 -TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHV-------------FDMRTQHPTKGFA---------------SVSEK 256 (357)
T ss_dssp -EECSSCEEEEEESCSSSSCCEEEEEESTTEEEE-------------EEEEEEETTTEEE---------------EEEEE
T ss_pred -cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEE-------------EeCcCCCccccee---------------eeccC
Confidence 45888999999999 9999999999999999 9988765511000 00111
Q ss_pred cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceE
Q psy467 215 KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFIL 294 (845)
Q Consensus 215 ~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~l 294 (845)
+|.. .|++++|+|+++. +
T Consensus 257 ~~~~----------------------------------------------------------~v~~~~~~~~~~~----~ 274 (357)
T 3i2n_A 257 AHKS----------------------------------------------------------TVWQVRHLPQNRE----L 274 (357)
T ss_dssp CCSS----------------------------------------------------------CEEEEEEETTEEE----E
T ss_pred CCcC----------------------------------------------------------CEEEEEECCCCCc----E
Confidence 3332 3455555555542 7
Q ss_pred EEEEeCCCeEEEEECCCC-------------------eEEEEecCCCCCEEEEEEeCCCCEEE-EEeCCC-EEEEEecCC
Q psy467 295 TTSSSADRTVNFWDLEKF-------------------SLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEG-LKVYGWEPA 353 (845)
Q Consensus 295 Latgs~DG~I~IWDl~s~-------------------~~l~tl~gh~~~VtslafSpdG~~La-sgs~DG-I~IWDl~tg 353 (845)
+++|+.||.|++||++++ +++..+.+|...|++++|+|+|++|+ +++.|+ |+|||+.+.
T Consensus 275 l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 275 FLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 999999999999998753 46788889999999999999999998 799999 999999876
Q ss_pred ce
Q psy467 354 RQ 355 (845)
Q Consensus 354 k~ 355 (845)
+.
T Consensus 355 ~~ 356 (357)
T 3i2n_A 355 NK 356 (357)
T ss_dssp --
T ss_pred cc
Confidence 53
No 89
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8e-31 Score=295.44 Aligned_cols=263 Identities=12% Similarity=0.193 Sum_probs=218.7
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC---CCeeEEEec----------C--CCCCeEEEE--EcCCCCEEEE
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALG---KSNCIMSLS----------G--HSTPVESVQ--FGNGEETLSA 75 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~---t~~~i~~l~----------~--h~~~V~sLa--fSpdg~~LaS 75 (845)
+|.+.|++++|+| ++++|++|+.||.|++||+. +++....+. . +...+.++. +++++.+|++
T Consensus 109 ~h~~~v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (437)
T 3gre_A 109 DCSSTVTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA 187 (437)
T ss_dssp ECSSCEEEEEECT-TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEE
T ss_pred cCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEE
Confidence 6999999999999 99999999999999999984 454443332 2 566777777 5688999999
Q ss_pred EECCCcEEEEECCCCcEEEEEcC--CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc-CCCCCeEEEEEec
Q psy467 76 GCQSGSIKIWNLAVPTVQRTLNG--HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR-GHSKSINSIRFSP 152 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v~~l~~--h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~-~h~~~V~sLafSP 152 (845)
|+.||.|++||+.+++.+..+.. |...|++++|+|++++|++|+.||.|++||+++++++..+. .|...|.+++|+|
T Consensus 188 ~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 267 (437)
T 3gre_A 188 LTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQ 267 (437)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECT
T ss_pred EeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecc
Confidence 99999999999999999999987 88999999999999999999999999999999999999886 6788999996665
Q ss_pred ----CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEe
Q psy467 153 ----DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVT 228 (845)
Q Consensus 153 ----dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~ 228 (845)
++.+|++++.||.|++ ||+.+++. +..+.++... +
T Consensus 268 ~~s~~~~~l~s~~~dg~i~i-------------wd~~~~~~--------------------~~~~~~~~~~-------~- 306 (437)
T 3gre_A 268 FYGKNSVIVVGGSSKTFLTI-------------WNFVKGHC--------------------QYAFINSDEQ-------P- 306 (437)
T ss_dssp TTCTTEEEEEEESTTEEEEE-------------EETTTTEE--------------------EEEEESSSSC-------C-
T ss_pred ccCCCccEEEEEcCCCcEEE-------------EEcCCCcE--------------------EEEEEcCCCC-------C-
Confidence 6779999999999999 99998887 6677766655 3
Q ss_pred eecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCccc--ccccCceeEEEcCCCCcccceEEEEEeCCCeEEE
Q psy467 229 RIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCV--PVSVSRTSLSILPQSPMLCFILTTSSSADRTVNF 306 (845)
Q Consensus 229 ~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~--~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~I 306 (845)
..+.|+|++......... .+...|++++|+ +++ +|++|+.|+.|++
T Consensus 307 --------------------------~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-----~l~s~~~d~~i~~ 354 (437)
T 3gre_A 307 --------------------------SMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-----ILLTDEATSSIVM 354 (437)
T ss_dssp --------------------------CGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-----EEEEEGGGTEEEE
T ss_pred --------------------------ccceecccccccccceecccccCCceEEEEEC-Cce-----EEEecCCCCeEEE
Confidence 333344444322222222 256778999999 666 8999999999999
Q ss_pred EECCCCeEEEEecC-------------------------------------CCCCEEEEEEeCC--CCEEEEEeCCC-EE
Q psy467 307 WDLEKFSLVSTTEK-------------------------------------NSSTIRRLTFSEG--GECLLGGDTEG-LK 346 (845)
Q Consensus 307 WDl~s~~~l~tl~g-------------------------------------h~~~VtslafSpd--G~~Lasgs~DG-I~ 346 (845)
||+.++++...+.+ |...|++++|+++ +.+|++|+.|| |+
T Consensus 355 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~ 434 (437)
T 3gre_A 355 FSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIG 434 (437)
T ss_dssp EETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEE
T ss_pred EECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEE
Confidence 99998876666654 8889999999998 88999999999 99
Q ss_pred EEE
Q psy467 347 VYG 349 (845)
Q Consensus 347 IWD 349 (845)
||+
T Consensus 435 iw~ 437 (437)
T 3gre_A 435 IFQ 437 (437)
T ss_dssp EEC
T ss_pred EeC
Confidence 995
No 90
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.8e-30 Score=290.28 Aligned_cols=280 Identities=18% Similarity=0.297 Sum_probs=226.9
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe----eEEEecCCCCCeEEEEEcC-CCCEEEEEECCCcEEEEECCCC
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN----CIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~----~i~~l~~h~~~V~sLafSp-dg~~LaSgs~DGtV~VWDl~tg 90 (845)
.....++++|+...++++++.||.|+||++.+.. .+..+.+|...|.+++|+| ++++|++|+.||.|++||+.++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 3455688888333445567889999999996542 3456788999999999999 9999999999999999999987
Q ss_pred -------cEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEE--cCCCCCeEEEEEecCCCEEEEE
Q psy467 91 -------TVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTY--RGHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 91 -------~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~--~~h~~~V~sLafSPdg~~Lasg 160 (845)
+.+..+.+|...|.+++|+|++ ++|++++.||.|++||+++++.+..+ ..|...|.+++|+|++++|+++
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 194 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS 194 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence 5678888999999999999998 69999999999999999999999999 7899999999999999999999
Q ss_pred eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEE-ecCCCCCccceeeEeeeccccccccc
Q psy467 161 GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSF-TKGRPGGTKAKIDVTRIEENAESEDQ 239 (845)
Q Consensus 161 s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~-~~h~~~~~~~~i~V~~i~~~~~~~~~ 239 (845)
+.||.|++ ||+++++. +..+ ..|... .+
T Consensus 195 ~~d~~i~i-------------wd~~~~~~--------------------~~~~~~~~~~~------~~------------ 223 (402)
T 2aq5_A 195 CRDKRVRV-------------IEPRKGTV--------------------VAEKDRPHEGT------RP------------ 223 (402)
T ss_dssp ETTSEEEE-------------EETTTTEE--------------------EEEEECSSCSS------SC------------
T ss_pred ecCCcEEE-------------EeCCCCce--------------------eeeeccCCCCC------cc------------
Confidence 99999999 99998776 5444 333221 01
Q ss_pred ccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEE---eCCCeEEEEECCCCeE-E
Q psy467 240 AGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS---SADRTVNFWDLEKFSL-V 315 (845)
Q Consensus 240 ~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg---s~DG~I~IWDl~s~~~-l 315 (845)
..+.|+|++. +|++| +.|+.|++||+++++. +
T Consensus 224 ---------------~~~~~~~~~~-----------------------------~l~~g~~~~~d~~i~iwd~~~~~~~~ 259 (402)
T 2aq5_A 224 ---------------VHAVFVSEGK-----------------------------ILTTGFSRMSERQVALWDTKHLEEPL 259 (402)
T ss_dssp ---------------CEEEECSTTE-----------------------------EEEEEECTTCCEEEEEEETTBCSSCS
T ss_pred ---------------eEEEEcCCCc-----------------------------EEEEeccCCCCceEEEEcCccccCCc
Confidence 3445555544 89998 7899999999988653 3
Q ss_pred EEec-CCCCCEEEEEEeCCCCEEEE-EeCCC-EEEEEecCCce-EEEecC--CCCCeEEEEEc-CCceEEEE---EEEEe
Q psy467 316 STTE-KNSSTIRRLTFSEGGECLLG-GDTEG-LKVYGWEPARQ-YDAQPM--GWGKVQDLAVT-GTQLWFRR---VGTWS 385 (845)
Q Consensus 316 ~tl~-gh~~~VtslafSpdG~~Las-gs~DG-I~IWDl~tgk~-l~tl~~--h~~~VtsVafS-dg~lLaaS---VsiW~ 385 (845)
.... .|...+.+++|+|++++|++ |+.|+ |++||+.+++. +..+.. |...|++++|+ ++.+++++ +.+|.
T Consensus 260 ~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~~~~~~~ 339 (402)
T 2aq5_A 260 SLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYK 339 (402)
T ss_dssp EEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTEEEEEEE
T ss_pred eEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecceeEEEEE
Confidence 2332 46778999999999999975 44688 99999999874 444443 56899999999 77777655 88897
Q ss_pred eCCCC
Q psy467 386 HQDSG 390 (845)
Q Consensus 386 ~d~~~ 390 (845)
+....
T Consensus 340 l~~~~ 344 (402)
T 2aq5_A 340 LHERK 344 (402)
T ss_dssp EETTE
T ss_pred cCCCc
Confidence 76543
No 91
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=7.1e-30 Score=283.96 Aligned_cols=272 Identities=8% Similarity=0.112 Sum_probs=211.3
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCC-------eEEEEECCCCee----------EEEecCCCCCeEEEEEcCCCCEEEEEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDK-------KVNLWALGKSNC----------IMSLSGHSTPVESVQFGNGEETLSAGC 77 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG-------~I~IWdl~t~~~----------i~~l~~h~~~V~sLafSpdg~~LaSgs 77 (845)
.-+|.|++|+| ++++|++|+.+. .|++|++..+.. ...+.+|...|.+++++ ++.+++|+
T Consensus 14 g~PV~sv~fs~-dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~ 90 (365)
T 4h5i_A 14 GYPAYGAKFLN-NDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGC 90 (365)
T ss_dssp SSCEEEEEEEE-TTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEEC
T ss_pred CCCEEEEEEeC-CCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEE
Confidence 45899999999 999999997543 599999865431 13467788899888775 55677664
Q ss_pred -----------CCCcEEEEECCCCcEE----EEEc-----CCCCCeEEEEEccCCCEEEEEE--CCCeEEEEECCCCceE
Q psy467 78 -----------QSGSIKIWNLAVPTVQ----RTLN-----GHKSSITSVDFHPYGDYLCSGS--LDSFIKLWDLRRKGCI 135 (845)
Q Consensus 78 -----------~DGtV~VWDl~tg~~v----~~l~-----~h~~~V~~lafspdg~~Lasgs--~DG~I~IWDl~t~~~l 135 (845)
.|+.+++|++.+.... .... .+...+.+++|+|||+++++++ .|++|++||+.+++++
T Consensus 91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~ 170 (365)
T 4h5i_A 91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK 170 (365)
T ss_dssp CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE
Confidence 4678999998764321 2221 2345688999999999987654 7899999999999999
Q ss_pred EEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEE--
Q psy467 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSF-- 213 (845)
Q Consensus 136 ~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~-- 213 (845)
..+. |...|.+++|+|||+++++++.+ .+.+ |+..++.. +...
T Consensus 171 ~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~-------------~~~~~~~~--------------------~~~~~~ 215 (365)
T 4h5i_A 171 FEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEV-------------ISTVTGSC--------------------IARKTD 215 (365)
T ss_dssp EEEE-CSSCCCEEEECTTSSEEEEECSS-CEEE-------------EETTTCCE--------------------EEEECC
T ss_pred EEeC-CCCceEEEEEccCCceEEeccce-eEEE-------------EEeccCcc--------------------eeeeec
Confidence 8886 77889999999999999999865 5666 77666554 2211
Q ss_pred ecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccce
Q psy467 214 TKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFI 293 (845)
Q Consensus 214 ~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~ 293 (845)
..|. ..+.+++|+|+++
T Consensus 216 ~~~~----------------------------------------------------------~~v~~v~fspdg~----- 232 (365)
T 4h5i_A 216 FDKN----------------------------------------------------------WSLSKINFIADDT----- 232 (365)
T ss_dssp CCTT----------------------------------------------------------EEEEEEEEEETTE-----
T ss_pred CCCC----------------------------------------------------------CCEEEEEEcCCCC-----
Confidence 1111 2234445555554
Q ss_pred EEEEEeCCC----eEEEEECCCCeE----EEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe-cCCC
Q psy467 294 LTTSSSADR----TVNFWDLEKFSL----VSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ-PMGW 363 (845)
Q Consensus 294 lLatgs~DG----~I~IWDl~s~~~----l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl-~~h~ 363 (845)
++++++.|+ .+++||+..... ...+.+|...|++++|||||++||+|+.|+ |+|||+.+++++..+ .+|.
T Consensus 233 ~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~ 312 (365)
T 4h5i_A 233 VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHS 312 (365)
T ss_dssp EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSS
T ss_pred EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCccc
Confidence 889988887 688999877643 456778999999999999999999999999 999999999999875 7899
Q ss_pred CCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 364 GKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 364 ~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
..|++|+|+ ||++|+++ |.+|.+.
T Consensus 313 ~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 313 FAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 999999999 99999887 9999874
No 92
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-28 Score=261.70 Aligned_cols=251 Identities=21% Similarity=0.367 Sum_probs=217.5
Q ss_pred ceeeee------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC---eeEEEecCCCCCeEEEEEcCCCCEE
Q psy467 3 AKVEKA------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS---NCIMSLSGHSTPVESVQFGNGEETL 73 (845)
Q Consensus 3 irlw~l------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~---~~i~~l~~h~~~V~sLafSpdg~~L 73 (845)
+++|++ ..+..|.+.|.+++|+| ++++|++++.||.|++|++.+. +.+..+.+|...|.+++| ++++|
T Consensus 41 v~vw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l 117 (313)
T 3odt_A 41 VRLWSKDDQWLGTVVYTGQGFLNSVCYDS-EKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVV 117 (313)
T ss_dssp EEEEEESSSEEEEEEEECSSCEEEEEEET-TTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEE
T ss_pred EEEEECCCCEEEEEeecCCccEEEEEECC-CCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEE
Confidence 677774 56789999999999999 9999999999999999998654 567788999999999999 57899
Q ss_pred EEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEEcC-CCCCeEEEEEe
Q psy467 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-HSKSINSIRFS 151 (845)
Q Consensus 74 aSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-h~~~V~sLafS 151 (845)
++++.||.|++|| .++....+..|...+.+++|+| +++++++++.||.|++|| ..+....+.. |...+.+++|+
T Consensus 118 ~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~ 193 (313)
T 3odt_A 118 ISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVV 193 (313)
T ss_dssp EEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEE
T ss_pred EEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEc
Confidence 9999999999999 6788888889999999999998 899999999999999999 4567777776 88999999999
Q ss_pred cCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec
Q psy467 152 PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 152 Pdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~ 231 (845)
|++. +++++.||.|++ ||+++++. +..+.+|... +
T Consensus 194 ~~~~-~~~~~~dg~i~i-------------~d~~~~~~--------------------~~~~~~~~~~-------i---- 228 (313)
T 3odt_A 194 DDGH-FISCSNDGLIKL-------------VDMHTGDV--------------------LRTYEGHESF-------V---- 228 (313)
T ss_dssp ETTE-EEEEETTSEEEE-------------EETTTCCE--------------------EEEEECCSSC-------E----
T ss_pred CCCe-EEEccCCCeEEE-------------EECCchhh--------------------hhhhhcCCce-------E----
Confidence 9988 999999999999 99998777 6666666555 5
Q ss_pred ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK 311 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s 311 (845)
..++|+|++. +++++.||.|++||+.+
T Consensus 229 -----------------------~~~~~~~~~~------------------------------l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 229 -----------------------YCIKLLPNGD------------------------------IVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp -----------------------EEEEECTTSC------------------------------EEEEETTSEEEEECTTT
T ss_pred -----------------------EEEEEecCCC------------------------------EEEEecCCEEEEEECCC
Confidence 5556665554 77889999999999999
Q ss_pred CeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe
Q psy467 312 FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 312 ~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl 359 (845)
++++..+..|...|.+++|+|+|+ +++++.|+ |++|++.+++.....
T Consensus 256 ~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 256 GSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp CCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC--
T ss_pred CceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehh
Confidence 999999999999999999999998 55688888 999999987765443
No 93
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=1.3e-30 Score=295.81 Aligned_cols=276 Identities=17% Similarity=0.218 Sum_probs=212.6
Q ss_pred cceeeee--------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC--CCCCeEEEEEcCCCC
Q psy467 2 RAKVEKA--------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG--HSTPVESVQFGNGEE 71 (845)
Q Consensus 2 ~irlw~l--------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~--h~~~V~sLafSpdg~ 71 (845)
++++|++ ..+.+|.+.|++|+|+|.++++|++|+.||+|++||+.++........ +...+.+++|+|++.
T Consensus 143 ~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSR 222 (435)
T ss_dssp CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTT
T ss_pred EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCC
Confidence 4678874 346789999999999987789999999999999999987654443333 345688999999999
Q ss_pred EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCC-EEEEEECCCeEEEEECCCCceEEE---EcCCCCCeEE
Q psy467 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWDLRRKGCIYT---YRGHSKSINS 147 (845)
Q Consensus 72 ~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~-~Lasgs~DG~I~IWDl~t~~~l~~---~~~h~~~V~s 147 (845)
+|++|+.||.|++||++ ++.+..+.+|...|.+++|+|++. +|++|+.|+.|++||+++.+.... ..+|...|.+
T Consensus 223 ~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~ 301 (435)
T 4e54_B 223 MVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNA 301 (435)
T ss_dssp EEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEE
T ss_pred EEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccc
Confidence 99999999999999997 456677889999999999999876 788999999999999987654433 3568899999
Q ss_pred EEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeE
Q psy467 148 IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDV 227 (845)
Q Consensus 148 LafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V 227 (845)
++|+|+|++|++++.||.|++ ||+.++.. ...+..|...... ....
T Consensus 302 ~~~spdg~~l~s~~~D~~i~i-------------wd~~~~~~--------------------~~~~~~~~~~~~~-~~~~ 347 (435)
T 4e54_B 302 ACFSPDGARLLTTDQKSEIRV-------------YSASQWDC--------------------PLGLIPHPHRHFQ-HLTP 347 (435)
T ss_dssp CCBCTTSSEEEEEESSSCEEE-------------EESSSSSS--------------------EEEECCCCCCCCS-SSCC
T ss_pred eeECCCCCeeEEEcCCCEEEE-------------EECCCCcc--------------------ceEEecccccccc-ccee
Confidence 999999999999999999999 99998877 4444444322000 0000
Q ss_pred eeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEE
Q psy467 228 TRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFW 307 (845)
Q Consensus 228 ~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IW 307 (845)
....|+|++. +..+++++++.. +++++..++.|++|
T Consensus 348 ---------------------------~~~~~~~~~~-------------~~~~~~~~d~~~----~~~~~~~~~~i~iw 383 (435)
T 4e54_B 348 ---------------------------IKAAWHPRYN-------------LIVVGRYPDPNF----KSCTPYELRTIDVF 383 (435)
T ss_dssp ---------------------------CBCEECSSSS-------------CEEEECCCCTTS----CCSSTTCCCCEEEE
T ss_pred ---------------------------EEEEEcCCCC-------------EEEEEEcCCCCe----EEEEecCCCEEEEE
Confidence 3345566554 344556666662 34444456789999
Q ss_pred ECCCCeEEEEec-CCCCCEEEE-EEeCCCCEEEEEeCCCEEEEEecCCceE
Q psy467 308 DLEKFSLVSTTE-KNSSTIRRL-TFSEGGECLLGGDTEGLKVYGWEPARQY 356 (845)
Q Consensus 308 Dl~s~~~l~tl~-gh~~~Vtsl-afSpdG~~Lasgs~DGI~IWDl~tgk~l 356 (845)
|..+++++..+. +|...|.++ +|+|+|++|++|+++.|+||++++++..
T Consensus 384 d~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 384 DGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTR 434 (435)
T ss_dssp CSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC-----
T ss_pred ECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeee
Confidence 999999988875 678888887 6999999999987433999999988653
No 94
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.2e-29 Score=281.46 Aligned_cols=264 Identities=11% Similarity=0.060 Sum_probs=221.0
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe---eEEEecC------------------------------------
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN---CIMSLSG------------------------------------ 56 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~---~i~~l~~------------------------------------ 56 (845)
.+|.+++|++ +|++|+++ .++.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~-dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSR-DGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECS-SSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecC-CCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 5789999999 88876666 47799999999888 6655543
Q ss_pred ------------------CCCCeEEEEEcCCCCEE-EEEECCCcEEEEECC--CCcEEEEEc--CCCCCeEEEEEccCCC
Q psy467 57 ------------------HSTPVESVQFGNGEETL-SAGCQSGSIKIWNLA--VPTVQRTLN--GHKSSITSVDFHPYGD 113 (845)
Q Consensus 57 ------------------h~~~V~sLafSpdg~~L-aSgs~DGtV~VWDl~--tg~~v~~l~--~h~~~V~~lafspdg~ 113 (845)
|...|.+++|+|++++| ++++.||.|++||+. +++.+..+. .|...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 33379999999999996 889899999999999 888888775 5678899999999999
Q ss_pred EEEEEECCCeEEEEECCCCceEE----EEcCCCCCeEEEEEecC---CCEEEEEeCCCcEEEeeeeccCCceeEEEECCC
Q psy467 114 YLCSGSLDSFIKLWDLRRKGCIY----TYRGHSKSINSIRFSPD---GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSL 186 (845)
Q Consensus 114 ~Lasgs~DG~I~IWDl~t~~~l~----~~~~h~~~V~sLafSPd---g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~t 186 (845)
+|++|+.+|.|++|++.++.... .+.+|...|.+++|+|+ +++|++++.|+.|++ ||+.+
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~v-------------wd~~~ 229 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKI-------------SHYPQ 229 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEE-------------EEESC
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEE-------------EECCC
Confidence 99999999999999998776543 67789999999999999 999999999999999 99988
Q ss_pred CccCCCCCCCCCcceeecCCCCeEEE-EecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCc
Q psy467 187 VHPLGTPPPQYTSSVPFSHNTSLRKS-FTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSL 265 (845)
Q Consensus 187 g~~l~~~~~~~i~svs~spdg~~l~~-~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~ 265 (845)
++. +.. +.+|... | .+++|+ ++.
T Consensus 230 ~~~--------------------~~~~~~~h~~~-------v---------------------------~~~~~s-d~~- 253 (450)
T 2vdu_B 230 CFI--------------------VDKWLFGHKHF-------V---------------------------SSICCG-KDY- 253 (450)
T ss_dssp TTC--------------------EEEECCCCSSC-------E---------------------------EEEEEC-STT-
T ss_pred Cce--------------------eeeeecCCCCc-------e---------------------------EEEEEC-CCC-
Confidence 776 444 3345444 4 555666 555
Q ss_pred CCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC-------------------------
Q psy467 266 NRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK------------------------- 320 (845)
Q Consensus 266 ~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g------------------------- 320 (845)
+|++|+.|+.|++||+.+++++..+..
T Consensus 254 ----------------------------~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (450)
T 2vdu_B 254 ----------------------------LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDI 305 (450)
T ss_dssp ----------------------------EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------C
T ss_pred ----------------------------EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccccc
Confidence 999999999999999999998888763
Q ss_pred CCCCEEEEEEeCCCCEEEEEe-CCC-EEEEEe--cCC---ceEEEecCCCCCeEEEEEcCCceEEE
Q psy467 321 NSSTIRRLTFSEGGECLLGGD-TEG-LKVYGW--EPA---RQYDAQPMGWGKVQDLAVTGTQLWFR 379 (845)
Q Consensus 321 h~~~VtslafSpdG~~Lasgs-~DG-I~IWDl--~tg---k~l~tl~~h~~~VtsVafSdg~lLaa 379 (845)
+...|.+++|+|++++|++++ .++ |+||++ .++ +.+..+..| +.|.+++|+++.++++
T Consensus 306 ~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~ 370 (450)
T 2vdu_B 306 IEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVT 370 (450)
T ss_dssp BCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEE
T ss_pred ceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEE
Confidence 235799999999999999999 788 999999 665 667788888 8899999996555554
No 95
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=8.4e-29 Score=265.01 Aligned_cols=254 Identities=20% Similarity=0.283 Sum_probs=211.1
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC----cEEEEEcCCCCCeEEEEEcc--CCCEEEEEECCCeEE
Q psy467 52 MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP----TVQRTLNGHKSSITSVDFHP--YGDYLCSGSLDSFIK 125 (845)
Q Consensus 52 ~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg----~~v~~l~~h~~~V~~lafsp--dg~~Lasgs~DG~I~ 125 (845)
..+.+|...|++++|+|++++|++|+.||.|++||+.++ +....+.+|...|.+++|+| ++++|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 346789999999999999999999999999999999876 46777889999999999999 699999999999999
Q ss_pred EEECCCC---------ceEEEEcCCCCCeEEEEEecC--CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC
Q psy467 126 LWDLRRK---------GCIYTYRGHSKSINSIRFSPD--GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP 194 (845)
Q Consensus 126 IWDl~t~---------~~l~~~~~h~~~V~sLafSPd--g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~ 194 (845)
+||++++ +.+..+..|...|.+++|+|+ +++|++++.||.|++ ||+++++.+....
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~i-------------wd~~~~~~~~~~~ 151 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRL-------------YDALEPSDLRSWT 151 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEE-------------EECSSTTCTTCCE
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEE-------------ecCCChHHhcccc
Confidence 9999876 567888899999999999999 999999999999999 9999877632210
Q ss_pred CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCccccc
Q psy467 195 PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPV 274 (845)
Q Consensus 195 ~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~ 274 (845)
... . + ..+.+.+. .+
T Consensus 152 ---------------~~~-~------------~---------------------------~~~~~~~~----------~~ 166 (351)
T 3f3f_A 152 ---------------LTS-E------------M---------------------------KVLSIPPA----------NH 166 (351)
T ss_dssp ---------------EEE-E------------E---------------------------ESCSCCCS----------SC
T ss_pred ---------------ccc-c------------c---------------------------cccccccC----------Cc
Confidence 000 0 0 00111111 12
Q ss_pred ccCceeEEEcCC---CCcccceEEEEEeCCCeEEEEECCCCeE--EEEecCCCCCEEEEEEeCCC----CEEEEEeCCC-
Q psy467 275 SVSRTSLSILPQ---SPMLCFILTTSSSADRTVNFWDLEKFSL--VSTTEKNSSTIRRLTFSEGG----ECLLGGDTEG- 344 (845)
Q Consensus 275 ~~~I~slafSPd---g~~~~~~lLatgs~DG~I~IWDl~s~~~--l~tl~gh~~~VtslafSpdG----~~Lasgs~DG- 344 (845)
...+.+++|+|+ +. ++++++.|+.+.+|+...++. +..+.+|...|++++|+|++ ++|++++.|+
T Consensus 167 ~~~~~~~~~~p~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPE-----KLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp SCCCEEEEECCCSSSCC-----EEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred ccceeEEEeccCCCCCc-----EEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 345666777765 55 899999999999998887765 77888999999999999998 8999999999
Q ss_pred EEEEEecCC----------------------------------------------ceEEEecCCCCCeEEEEEc-CCceE
Q psy467 345 LKVYGWEPA----------------------------------------------RQYDAQPMGWGKVQDLAVT-GTQLW 377 (845)
Q Consensus 345 I~IWDl~tg----------------------------------------------k~l~tl~~h~~~VtsVafS-dg~lL 377 (845)
|++||+.++ +.+..+.+|...|++++|+ ++++|
T Consensus 242 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 321 (351)
T 3f3f_A 242 IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTIL 321 (351)
T ss_dssp EEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCE
T ss_pred EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEE
Confidence 999999875 5677888999999999999 88888
Q ss_pred EEE-----EEEEeeCC
Q psy467 378 FRR-----VGTWSHQD 388 (845)
Q Consensus 378 aaS-----VsiW~~d~ 388 (845)
+++ |.+|....
T Consensus 322 ~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 322 SSAGDDGKVRLWKATY 337 (351)
T ss_dssp EEEETTSCEEEEEECT
T ss_pred EEecCCCcEEEEecCc
Confidence 877 99998753
No 96
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=1.5e-28 Score=271.17 Aligned_cols=256 Identities=17% Similarity=0.222 Sum_probs=207.5
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCC---CCEEEEEECCCcEEEEECCC
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG---EETLSAGCQSGSIKIWNLAV 89 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpd---g~~LaSgs~DGtV~VWDl~t 89 (845)
+|.+.|.+++|+|+++.+|++++.||.|++||+.+++....+. +...+.++.|++. +.++++++.+|.|++||+.+
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 5999999999999778899999999999999999999888887 7888999999984 45999999999999999999
Q ss_pred CcEEEEEcCCCCCeEEEEEccCCC-EEEEEECCCeEEEEECCCCc-eEEEE---------------cCCCCCeEEEEEec
Q psy467 90 PTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWDLRRKG-CIYTY---------------RGHSKSINSIRFSP 152 (845)
Q Consensus 90 g~~v~~l~~h~~~V~~lafspdg~-~Lasgs~DG~I~IWDl~t~~-~l~~~---------------~~h~~~V~sLafSP 152 (845)
++.+..+..|...|.+++|+|+++ .|++++.||.|++||++++. ++..+ ..|...|.+++|+|
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 999999999999999999999998 58999999999999998765 44444 46888999999999
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
++++|++++.||.|++ ||+.+++..... ..+..... .
T Consensus 256 ~~~~l~~~~~dg~i~v-------------wd~~~~~~~~~~--------------------~~~~~~~~-----~----- 292 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRL-------------WNSSNGENTLVN--------------------YGKVCNNS-----K----- 292 (408)
T ss_dssp TSSEEEEEETTSCEEE-------------EETTTCCBCCCC--------------------CCCCCCCC-----S-----
T ss_pred CCCEEEEecCCCeEEE-------------EECCCCccceec--------------------cccccccc-----c-----
Confidence 9999999999999999 999987762111 11100000 0
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF 312 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~ 312 (845)
.. ....+... .+. .+++++.|+.|++||+.++
T Consensus 293 ------------------~~--~~~~~~~~-----------------------~~~-----~~~~~~~~~~i~v~d~~~~ 324 (408)
T 4a11_B 293 ------------------KG--LKFTVSCG-----------------------CSS-----EFVFVPYGSTIAVYTVYSG 324 (408)
T ss_dssp ------------------SC--CCCEECCS-----------------------SSS-----CEEEEEETTEEEEEETTTC
T ss_pred ------------------cc--ceeEEecC-----------------------CCc-----eEEEEecCCEEEEEECcCC
Confidence 00 01111111 111 5667778999999999999
Q ss_pred eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEec
Q psy467 313 SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQP 360 (845)
Q Consensus 313 ~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~ 360 (845)
+++..+.+|...|++++|+|++++|++++.|| |++|++.+++.+....
T Consensus 325 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~ 373 (408)
T 4a11_B 325 EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDD 373 (408)
T ss_dssp CEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--------
T ss_pred cceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCC
Confidence 99999999999999999999999999999999 9999999988776544
No 97
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-28 Score=269.05 Aligned_cols=258 Identities=19% Similarity=0.243 Sum_probs=209.5
Q ss_pred eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC--CCcEEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeE
Q psy467 49 NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA--VPTVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFI 124 (845)
Q Consensus 49 ~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~--tg~~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I 124 (845)
+.+..+.+|...|.+++|+|++++|++|+.||.|++||+. +++.+..+.+|...|++++|+++ +++|++++.||.|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 4566788999999999999999999999999999999998 56777889999999999999987 8999999999999
Q ss_pred EEEECCCCc--eEEEEcCCCCCeEEEEEecC--CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcc
Q psy467 125 KLWDLRRKG--CIYTYRGHSKSINSIRFSPD--GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSS 200 (845)
Q Consensus 125 ~IWDl~t~~--~l~~~~~h~~~V~sLafSPd--g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~s 200 (845)
++||+.+++ .+..+..|...|.+++|+|+ +++|++++.|+.|++ ||+.++....
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v-------------~d~~~~~~~~--------- 139 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV-------------VEFKENGTTS--------- 139 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE-------------EECCTTSCCC---------
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEE-------------EecCCCCcee---------
Confidence 999999887 77788889999999999999 999999999999999 9998764411
Q ss_pred eeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCcee
Q psy467 201 VPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTS 280 (845)
Q Consensus 201 vs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~s 280 (845)
...+..|... + .+++|+|... .....
T Consensus 140 ---------~~~~~~~~~~-------v---------------------------~~~~~~~~~~-----------~~~~~ 165 (379)
T 3jrp_A 140 ---------PIIIDAHAIG-------V---------------------------NSASWAPATI-----------EEDGE 165 (379)
T ss_dssp ---------EEEEECCTTC-------E---------------------------EEEEECCCC-----------------
T ss_pred ---------eEEecCCCCc-------e---------------------------EEEEEcCccc-----------ccccc
Confidence 3334455555 5 6667776422 00001
Q ss_pred EEEcCCCCcccceEEEEEeCCCeEEEEECCCCe----EEEEecCCCCCEEEEEEeCC---CCEEEEEeCCC-EEEEEecC
Q psy467 281 LSILPQSPMLCFILTTSSSADRTVNFWDLEKFS----LVSTTEKNSSTIRRLTFSEG---GECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 281 lafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~----~l~tl~gh~~~VtslafSpd---G~~Lasgs~DG-I~IWDl~t 352 (845)
....+++. ++++|+.||.|++||++++. ++..+.+|...|++++|+|+ +++|++++.|+ |++||+.+
T Consensus 166 ~~~~~~~~-----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 166 HNGTKESR-----KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp ----CTTC-----EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred ccCCCCCC-----EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 11133455 89999999999999997653 56778899999999999999 89999999999 99999998
Q ss_pred Cc---eEEE--ecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 353 AR---QYDA--QPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 353 gk---~l~t--l~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
+. .... ...|...|++++|+ ++++|+++ +.+|..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 241 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred CCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 74 2222 33488899999999 88888876 9999775
No 98
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=5.5e-29 Score=282.11 Aligned_cols=252 Identities=20% Similarity=0.337 Sum_probs=216.2
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC----------CeeEEEecCCCCCeEEEEEcCCCC-EEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK----------SNCIMSLSGHSTPVESVQFGNGEE-TLSAG 76 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t----------~~~i~~l~~h~~~V~sLafSpdg~-~LaSg 76 (845)
.....+|.+.|++++|+|+++.+||+++.||.|++|++.+ ...+..+.+|...|.+++|+|++. +|++|
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 3556789999999999994478999999999999999976 677888999999999999999988 99999
Q ss_pred ECCCcEEEEECCCCcE-------EEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCC---ceEEEEcCCCCCe
Q psy467 77 CQSGSIKIWNLAVPTV-------QRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRK---GCIYTYRGHSKSI 145 (845)
Q Consensus 77 s~DGtV~VWDl~tg~~-------v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~---~~l~~~~~h~~~V 145 (845)
+.||.|++||+.++.. ...+.+|...|.+++|+| ++.+|++++.||.|++||++++ ..+..+..|...|
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 9999999999987321 456678999999999999 6789999999999999999987 5777888899999
Q ss_pred EEEEEecCCC-EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 146 NSIRFSPDGQ-WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 146 ~sLafSPdg~-~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
.+++|+|++. ++++|+.||.|++ ||+++... .+..+..|...
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~v-------------wd~~~~~~-------------------~~~~~~~h~~~----- 323 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVAL-------------WDLRNLKL-------------------KLHSFESHKDE----- 323 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEE-------------EETTCTTS-------------------CSEEEECCSSC-----
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEE-------------EeCCCCCC-------------------CeEEeecCCCC-----
Confidence 9999999887 6889999999999 99987432 04555555555
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
+ .++.|+|++. . +|++++.|+.|
T Consensus 324 --v---------------------------~~i~~sp~~~------------------------~----~l~s~~~d~~i 346 (430)
T 2xyi_A 324 --I---------------------------FQVQWSPHNE------------------------T----ILASSGTDRRL 346 (430)
T ss_dssp --E---------------------------EEEEECSSCT------------------------T----EEEEEETTSCC
T ss_pred --E---------------------------EEEEECCCCC------------------------C----EEEEEeCCCcE
Confidence 5 5566666553 1 79999999999
Q ss_pred EEEECCC--------------CeEEEEecCCCCCEEEEEEeCCCC-EEEEEeCCC-EEEEEecCC
Q psy467 305 NFWDLEK--------------FSLVSTTEKNSSTIRRLTFSEGGE-CLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 305 ~IWDl~s--------------~~~l~tl~gh~~~VtslafSpdG~-~Lasgs~DG-I~IWDl~tg 353 (845)
++||+.. .+++..+.+|...|++++|+|+++ +|++++.|+ |+||++...
T Consensus 347 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 347 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 9999986 367888889999999999999999 899999999 999998753
No 99
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=3.6e-29 Score=279.70 Aligned_cols=249 Identities=16% Similarity=0.258 Sum_probs=208.7
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC-------eeEEEecCCCCCeEEEEEcCCC-CEEEEEECCCc
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-------NCIMSLSGHSTPVESVQFGNGE-ETLSAGCQSGS 81 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~-------~~i~~l~~h~~~V~sLafSpdg-~~LaSgs~DGt 81 (845)
.+.+|.+.|++++|+|.++++|++|+.||.|+||++.++ +.+..+.+|...|.+++|+|++ ++|++++.||.
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~ 155 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV 155 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE
Confidence 477899999999999977899999999999999999887 6688899999999999999998 69999999999
Q ss_pred EEEEECCCCcEEEEE--cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE-cCCCCC-eEEEEEecCCCEE
Q psy467 82 IKIWNLAVPTVQRTL--NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY-RGHSKS-INSIRFSPDGQWI 157 (845)
Q Consensus 82 V~VWDl~tg~~v~~l--~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~-~~h~~~-V~sLafSPdg~~L 157 (845)
|++||+.+++.+..+ ..|...|.+++|+|++++|++++.||.|++||+++++.+..+ ..|.+. +.+++|+|++++|
T Consensus 156 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKIL 235 (402)
T ss_dssp EEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEE
T ss_pred EEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEE
Confidence 999999999999999 789999999999999999999999999999999999999988 678765 8999999999999
Q ss_pred EEE---eCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe-cCCCCCccceeeEeeeccc
Q psy467 158 ASG---GEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT-KGRPGGTKAKIDVTRIEEN 233 (845)
Q Consensus 158 asg---s~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~-~h~~~~~~~~i~V~~i~~~ 233 (845)
++| +.|+.|++ ||++++... +.... .+.
T Consensus 236 ~~g~~~~~d~~i~i-------------wd~~~~~~~-------------------~~~~~~~~~---------------- 267 (402)
T 2aq5_A 236 TTGFSRMSERQVAL-------------WDTKHLEEP-------------------LSLQELDTS---------------- 267 (402)
T ss_dssp EEEECTTCCEEEEE-------------EETTBCSSC-------------------SEEEECCCC----------------
T ss_pred EEeccCCCCceEEE-------------EcCccccCC-------------------ceEEeccCC----------------
Confidence 999 78999999 999876540 11111 111
Q ss_pred ccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE-EEeCCCeEEEEECCCC
Q psy467 234 AESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT-SSSADRTVNFWDLEKF 312 (845)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa-tgs~DG~I~IWDl~s~ 312 (845)
..+.+++|+|+++ +|+ +|+.||.|++||+.++
T Consensus 268 ------------------------------------------~~v~~~~~s~~~~-----~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 268 ------------------------------------------SGVLLPFFDPDTN-----IVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp ------------------------------------------SSCEEEEEETTTT-----EEEEEETTCSCEEEEEECSS
T ss_pred ------------------------------------------CceeEEEEcCCCC-----EEEEEEcCCCeEEEEEecCC
Confidence 1234445555554 665 5667999999999988
Q ss_pred eE-EEEecC--CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCce
Q psy467 313 SL-VSTTEK--NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ 355 (845)
Q Consensus 313 ~~-l~tl~g--h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~ 355 (845)
+. +..+.. |...|.+++|+|++.++++ .++ +++|++.++++
T Consensus 301 ~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 301 APFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp TTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred CcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 73 444443 5689999999999998875 455 99999988653
No 100
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.7e-30 Score=300.93 Aligned_cols=267 Identities=16% Similarity=0.143 Sum_probs=209.0
Q ss_pred CCCcEEEEEEecCCC---------CEEEEE-------------------eCCCeEEEEECCCCeeE----EEecCCCCCe
Q psy467 14 HGASVNCLALGKKSG---------QVLATG-------------------GDDKKVNLWALGKSNCI----MSLSGHSTPV 61 (845)
Q Consensus 14 H~~~V~~LafSp~dg---------~~LaTg-------------------s~DG~I~IWdl~t~~~i----~~l~~h~~~V 61 (845)
+.+.|.+|+|+| ++ ++||+| +.|++|+||++.+++.. ..+.+|.+.|
T Consensus 132 ~~~~V~sv~w~p-~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V 210 (524)
T 2j04_B 132 VGGLVTDIAWLN-IEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEV 210 (524)
T ss_dssp CCC--CCCSCEE-ECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSE
T ss_pred CCCceeEEEecc-cCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcE
Confidence 678999999999 54 567664 47789999999776542 4467788999
Q ss_pred EEEEEcCC------CCEEEEEECCCcEEEEECCCCcE-----------EEEEcCCCCCeEEEEEccCCCEEEEEECCCeE
Q psy467 62 ESVQFGNG------EETLSAGCQSGSIKIWNLAVPTV-----------QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFI 124 (845)
Q Consensus 62 ~sLafSpd------g~~LaSgs~DGtV~VWDl~tg~~-----------v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I 124 (845)
.+++|+|+ +.+||+++.||+|++||+.++.. ...+.+|...|++++|++++ .|++|+.||+|
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV 289 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFV 289 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEE
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEE
Confidence 99999996 57999999999999999987632 24678899999999999864 89999999999
Q ss_pred EEEECCCCc-eEEEEcCCCCCeEEE--EEecCC-CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcc
Q psy467 125 KLWDLRRKG-CIYTYRGHSKSINSI--RFSPDG-QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSS 200 (845)
Q Consensus 125 ~IWDl~t~~-~l~~~~~h~~~V~sL--afSPdg-~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~s 200 (845)
++||++++. +...+.+|...|.++ +|+|++ ++|++++.|++|++ ||+++++.
T Consensus 290 ~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvkl-------------WD~~~~~~----------- 345 (524)
T 2j04_B 290 AEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYI-------------FNPKDIAT----------- 345 (524)
T ss_dssp EEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEE-------------ECGGGHHH-----------
T ss_pred EEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEE-------------EECCCCCc-----------
Confidence 999998764 456688999999999 578887 89999999999999 99987766
Q ss_pred eeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCcee
Q psy467 201 VPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTS 280 (845)
Q Consensus 201 vs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~s 280 (845)
+..+.+|.... .+ .+++|+|++.
T Consensus 346 ---------~~~~~~~~~~~-----~v---------------------------~~v~fsp~~~---------------- 368 (524)
T 2j04_B 346 ---------TKTTVSRFRGS-----NL---------------------------VPVVYCPQIY---------------- 368 (524)
T ss_dssp ---------HCEEEEECSCC-----SC---------------------------CCEEEETTTT----------------
T ss_pred ---------ccccccccccC-----cc---------------------------cceEeCCCcC----------------
Confidence 33333332110 01 3444555444
Q ss_pred EEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe
Q psy467 281 LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 281 lafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl 359 (845)
.+++++.|+.|++||++++.++.++.+|.+.|++++|||+|++|++|+.|+ |+|||.... .+...
T Consensus 369 -------------~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~ 434 (524)
T 2j04_B 369 -------------SYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGI 434 (524)
T ss_dssp -------------EEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC
T ss_pred -------------eEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hcccc
Confidence 899999999999999999998888999999999999999999999999999 999998653 32222
Q ss_pred cC-----CCCCeEEEEEc-CCceE
Q psy467 360 PM-----GWGKVQDLAVT-GTQLW 377 (845)
Q Consensus 360 ~~-----h~~~VtsVafS-dg~lL 377 (845)
.. +...|++++|+ +++.+
T Consensus 435 ~~~~~~~~~~~v~~v~~sp~g~~~ 458 (524)
T 2j04_B 435 KNSSATQKSLRLWKWDYSIKDDKY 458 (524)
T ss_dssp ------CCCCEEEECBCCSSSCEE
T ss_pred ccCccceeeeEEEEeccCCCCCeE
Confidence 11 11247899999 77744
No 101
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=2.7e-29 Score=272.89 Aligned_cols=259 Identities=17% Similarity=0.241 Sum_probs=195.8
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc--EEEEEcCCCCCeEEEEEcc--CCCEEEEEECCCeEEEEE
Q psy467 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT--VQRTLNGHKSSITSVDFHP--YGDYLCSGSLDSFIKLWD 128 (845)
Q Consensus 53 ~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~--~v~~l~~h~~~V~~lafsp--dg~~Lasgs~DG~I~IWD 128 (845)
.+.+|...|++++|+|+|++||+|+.|++|++||+.++. .+..+.+|...|.+++|++ ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456899999999999999999999999999999998875 4677889999999999986 488999999999999999
Q ss_pred CCCC--ceEEEEcCCCCCeEEEEEecC--CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeec
Q psy467 129 LRRK--GCIYTYRGHSKSINSIRFSPD--GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFS 204 (845)
Q Consensus 129 l~t~--~~l~~~~~h~~~V~sLafSPd--g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~s 204 (845)
++++ ..+..+.+|...|.+++|+|+ +.+|++++.|+.|++ ||++.+.....
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~l-------------wd~~~~~~~~~------------ 142 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISL-------------LTYTGEGQWEV------------ 142 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEE-------------EEECSSSCEEE------------
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEE-------------EecCCCCCcce------------
Confidence 9876 466778889999999999997 789999999999999 99876532000
Q ss_pred CCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEc
Q psy467 205 HNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSIL 284 (845)
Q Consensus 205 pdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafS 284 (845)
...+.+|... + ..+.|+|+... +........ ...
T Consensus 143 -----~~~~~~h~~~-------v---------------------------~~~~~~~~~~~---~~~~~~~~~----~~~ 176 (316)
T 3bg1_A 143 -----KKINNAHTIG-------C---------------------------NAVSWAPAVVP---GSLIDHPSG----QKP 176 (316)
T ss_dssp -----CCBTTSSSSC-------B---------------------------CCCEECCCCCC---------CCS----CCC
T ss_pred -----eeeeccccCC-------c---------------------------ceEEEccccCC---ccccccccc----cCc
Confidence 0011122222 2 34445544220 000000000 001
Q ss_pred CCCCcccceEEEEEeCCCeEEEEECCCC---eEEEEecCCCCCEEEEEEeCCC----CEEEEEeCCC-EEEEEecCC---
Q psy467 285 PQSPMLCFILTTSSSADRTVNFWDLEKF---SLVSTTEKNSSTIRRLTFSEGG----ECLLGGDTEG-LKVYGWEPA--- 353 (845)
Q Consensus 285 Pdg~~~~~~lLatgs~DG~I~IWDl~s~---~~l~tl~gh~~~VtslafSpdG----~~Lasgs~DG-I~IWDl~tg--- 353 (845)
.+++ +|++|+.|+.|++||++.. +++..+.+|...|.+++|+|++ .+|++++.|+ |+||++.+.
T Consensus 177 ~~~~-----~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~ 251 (316)
T 3bg1_A 177 NYIK-----RFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSN 251 (316)
T ss_dssp CCCC-----BEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCC
T ss_pred cccc-----eEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCcccc
Confidence 1233 7999999999999999754 5778889999999999999986 8999999999 999999863
Q ss_pred c-eEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 354 R-QYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 354 k-~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
+ ....+..|...|++++|+ ++++|+++ |.+|...
T Consensus 252 ~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 252 TWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred chhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 1 223456788999999999 88888877 9999765
No 102
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.1e-29 Score=279.72 Aligned_cols=243 Identities=15% Similarity=0.183 Sum_probs=196.8
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC--cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC
Q psy467 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP--TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131 (845)
Q Consensus 54 l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg--~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t 131 (845)
+..+..+|++++|+|++++|++|+.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.||.|++||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 3446779999999999999999999999999999988 77788889999999999999999999999999999999998
Q ss_pred Cc---eEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC
Q psy467 132 KG---CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS 208 (845)
Q Consensus 132 ~~---~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~ 208 (845)
+. ....+..|...|.+++|+|++++|++++.|+.|++ ||+.+++....
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i-------------wd~~~~~~~~~---------------- 137 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISV-------------CYFEQENDWWV---------------- 137 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEE-------------CCC-----CCC----------------
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEE-------------EEECCccccee----------------
Confidence 76 67778889999999999999999999999999999 99987653100
Q ss_pred eEEEEec-CCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCC
Q psy467 209 LRKSFTK-GRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQS 287 (845)
Q Consensus 209 ~l~~~~~-h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg 287 (845)
...+.. |... + .+++|+ |++
T Consensus 138 -~~~~~~~h~~~-------v---------------------------~~~~~~------------------------~~~ 158 (377)
T 3dwl_C 138 -SKHLKRPLRST-------I---------------------------LSLDWH------------------------PNN 158 (377)
T ss_dssp -CEEECSSCCSC-------E---------------------------EEEEEC------------------------TTS
T ss_pred -eeEeecccCCC-------e---------------------------EEEEEc------------------------CCC
Confidence 222332 3333 3 444444 444
Q ss_pred CcccceEEEEEeCCCeEEEEECC------------------CCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEE
Q psy467 288 PMLCFILTTSSSADRTVNFWDLE------------------KFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348 (845)
Q Consensus 288 ~~~~~~lLatgs~DG~I~IWDl~------------------s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IW 348 (845)
+ +|++++.|+.|++||+. .++++..+ +|...|++++|+|+|++|++++.|+ |++|
T Consensus 159 ~-----~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iw 232 (377)
T 3dwl_C 159 V-----LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIA 232 (377)
T ss_dssp S-----EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-C
T ss_pred C-----EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 4 99999999999999985 35677777 8999999999999999999999999 9999
Q ss_pred EecCCce----EEEecCCCCCeEEEEEc-CCceEEEE----EEEEeeCCCC
Q psy467 349 GWEPARQ----YDAQPMGWGKVQDLAVT-GTQLWFRR----VGTWSHQDSG 390 (845)
Q Consensus 349 Dl~tgk~----l~tl~~h~~~VtsVafS-dg~lLaaS----VsiW~~d~~~ 390 (845)
|+.+++. +..+.+|...|++++|+ ++++|+++ +.+|..+...
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~ 283 (377)
T 3dwl_C 233 YPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESG 283 (377)
T ss_dssp EECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC--
T ss_pred ECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCc
Confidence 9999987 78889999999999999 99999888 6677655433
No 103
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=2e-28 Score=272.30 Aligned_cols=247 Identities=13% Similarity=0.142 Sum_probs=192.1
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEe-----------CCCeEEEEECCCCeeE----EEe-----cCCCCCeEEEEEcCC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGG-----------DDKKVNLWALGKSNCI----MSL-----SGHSTPVESVQFGNG 69 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs-----------~DG~I~IWdl~t~~~i----~~l-----~~h~~~V~sLafSpd 69 (845)
.|.+|...|.+++++. +.+++|. .|+.+++|++.+.... ... ..+...+.+++||||
T Consensus 68 ~l~~~~~~v~s~~~~~---~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD 144 (365)
T 4h5i_A 68 ALEDNDDSPTAIDASK---GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE 144 (365)
T ss_dssp ECCTTSCCCCEEEEET---TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT
T ss_pred EccCCCCceEEEEeCC---CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC
Confidence 4778999999998854 6777664 4778999998654322 111 234566999999999
Q ss_pred CCEEEEEE--CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE--EcCCCCCe
Q psy467 70 EETLSAGC--QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT--YRGHSKSI 145 (845)
Q Consensus 70 g~~LaSgs--~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~--~~~h~~~V 145 (845)
|++|++++ .|++|+|||+.+++++..+. |...|.+++|+|||+++++++.+ .+.+|+..++..+.. ...|...|
T Consensus 145 g~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v 222 (365)
T 4h5i_A 145 GTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSL 222 (365)
T ss_dssp SSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEE
T ss_pred CCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCE
Confidence 99987654 68999999999999998887 77889999999999999999855 577777777776544 34578889
Q ss_pred EEEEEecCCCEEEEEeCCC----cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCc
Q psy467 146 NSIRFSPDGQWIASGGEDG----VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGT 221 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG----~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~ 221 (845)
.+++|+|+++++++++.|+ .+.. ||+....... .....+.+|..
T Consensus 223 ~~v~fspdg~~l~~~s~d~~~~~~i~~-------------~~~~~~~~~~----------------~~~~~~~~~~~--- 270 (365)
T 4h5i_A 223 SKINFIADDTVLIAASLKKGKGIVLTK-------------ISIKSGNTSV----------------LRSKQVTNRFK--- 270 (365)
T ss_dssp EEEEEEETTEEEEEEEESSSCCEEEEE-------------EEEETTEEEE----------------EEEEEEESSCS---
T ss_pred EEEEEcCCCCEEEEEecCCcceeEEee-------------cccccceecc----------------eeeeeecCCCC---
Confidence 9999999999999999887 3555 8776544300 00112222322
Q ss_pred cceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC
Q psy467 222 KAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD 301 (845)
Q Consensus 222 ~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D 301 (845)
.|++++|+|||+ +||+|+.|
T Consensus 271 -------------------------------------------------------~V~~~~~Spdg~-----~lasgs~D 290 (365)
T 4h5i_A 271 -------------------------------------------------------GITSMDVDMKGE-----LAVLASND 290 (365)
T ss_dssp -------------------------------------------------------CEEEEEECTTSC-----EEEEEETT
T ss_pred -------------------------------------------------------CeEeEEECCCCC-----ceEEEcCC
Confidence 345556666665 99999999
Q ss_pred CeEEEEECCCCeEEEEe-cCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 302 RTVNFWDLEKFSLVSTT-EKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 302 G~I~IWDl~s~~~l~tl-~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
+.|+|||+.+++++.++ .+|...|++++|||||++||+|+.|+ |+||++...
T Consensus 291 ~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 291 NSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp SCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999885 68999999999999999999999999 999999653
No 104
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.4e-29 Score=304.85 Aligned_cols=255 Identities=21% Similarity=0.291 Sum_probs=210.2
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC--CCeeEEEecCCCCCeEEEEEcCC--CCEEEEEECCCcEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALG--KSNCIMSLSGHSTPVESVQFGNG--EETLSAGCQSGSIKI 84 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~--t~~~i~~l~~h~~~V~sLafSpd--g~~LaSgs~DGtV~V 84 (845)
..+.+|.+.|++++|+| ++++|++|+.||.|+||++. ++..+..+.+|...|.+++|+++ +++|++|+.||.|++
T Consensus 3 ~~l~gH~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 3 VIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp -----CCCCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eecccCcceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 56889999999999999 89999999999999999997 55778889999999999999988 999999999999999
Q ss_pred EECCCCc--EEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeEEEEECCCC--ceEEEEcCCCCCeEEEEEec------
Q psy467 85 WNLAVPT--VQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRK--GCIYTYRGHSKSINSIRFSP------ 152 (845)
Q Consensus 85 WDl~tg~--~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~--~~l~~~~~h~~~V~sLafSP------ 152 (845)
||+.+++ .+..+.+|...|.+++|+|+ ++++++|+.||.|++||++++ .....+..|...|.+++|+|
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC----
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccc
Confidence 9999986 77788889999999999999 999999999999999999876 34456678999999999999
Q ss_pred -------CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 153 -------DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 153 -------dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
++.++++|+.||.|++ ||++++... ......+.+|...
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~i-------------wd~~~~~~~----------------~~~~~~~~~h~~~------ 206 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKI-------------WKYNSDAQT----------------YVLESTLEGHSDW------ 206 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEE-------------EEEETTTTE----------------EEEEEEECCCSSC------
T ss_pred cccccCCCCCEEEEEECCCeEEE-------------EeccCCccc----------------ceeeeeecCCCCc------
Confidence 5899999999999999 999876430 0013333444443
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
| .+++|+|++. .++ ++++|+.||.|+
T Consensus 207 -V---------------------------~~l~~sp~~~---------------------~~~-----~l~s~s~Dg~I~ 232 (753)
T 3jro_A 207 -V---------------------------RDVAWSPTVL---------------------LRS-----YLASVSQDRTCI 232 (753)
T ss_dssp -E---------------------------EEEEECCCCS---------------------SSE-----EEEEEESSSCEE
T ss_pred -E---------------------------EEEEeccCCC---------------------CCC-----EEEEEecCCEEE
Confidence 3 4445554410 034 999999999999
Q ss_pred EEECCCCe-----EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 306 FWDLEKFS-----LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 306 IWDl~s~~-----~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
+||+.++. .+.....|...|++++|+|+|++|++|+.|| |++|++.++
T Consensus 233 iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp EEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred EecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 99998864 2333445888999999999999999999999 999999853
No 105
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=2.4e-28 Score=274.59 Aligned_cols=258 Identities=16% Similarity=0.249 Sum_probs=200.9
Q ss_pred eEEeccCC------------CcEEEEEEecCCC--CEEEEEeCCCeEEEEECCCCeeE----------------------
Q psy467 8 AEDFMAHG------------ASVNCLALGKKSG--QVLATGGDDKKVNLWALGKSNCI---------------------- 51 (845)
Q Consensus 8 l~~L~gH~------------~~V~~LafSp~dg--~~LaTgs~DG~I~IWdl~t~~~i---------------------- 51 (845)
+..+.+|. +.|++++|+| ++ .+|++++.|+.|++|++.++...
T Consensus 74 ~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~-~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 152 (447)
T 3dw8_B 74 YSTFQSHEPEFDYLKSLEIEEKINKIRWLP-QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTL 152 (447)
T ss_dssp EEEEECCCCEEEGGGTEEECCCCCEEEECC-CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSC
T ss_pred ecccccccccccccccccccCceEEEEEcC-CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccce
Confidence 45788998 8899999999 66 79999999999999998764432
Q ss_pred -----------------EE-ecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC-CcEEEE-------EcCCCCCeEE
Q psy467 52 -----------------MS-LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV-PTVQRT-------LNGHKSSITS 105 (845)
Q Consensus 52 -----------------~~-l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t-g~~v~~-------l~~h~~~V~~ 105 (845)
.. ..+|...|.+++|+|++++|++| .|+.|++||+.+ ++.+.. +.+|...|.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~ 231 (447)
T 3dw8_B 153 RVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITA 231 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEE
T ss_pred EeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEE
Confidence 12 36799999999999999999999 799999999994 444442 4579999999
Q ss_pred EEEccCC-CEEEEEECCCeEEEEECCCCce----EEEEcCCCC------------CeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 106 VDFHPYG-DYLCSGSLDSFIKLWDLRRKGC----IYTYRGHSK------------SINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 106 lafspdg-~~Lasgs~DG~I~IWDl~t~~~----l~~~~~h~~------------~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
++|+|++ ++|++|+.||.|++||+++++. +..+..|.. .|.+++|+|++++|++++. +.|++
T Consensus 232 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~i 310 (447)
T 3dw8_B 232 AEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKV 310 (447)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEE
T ss_pred EEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEE
Confidence 9999998 9999999999999999998886 788888776 8999999999999999999 99999
Q ss_pred eeeeccCCceeEEEECCC-CccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh
Q psy467 169 GASFHLTNTSIHVVDLSL-VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~t-g~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~ 247 (845)
||+++ ++. +..+.+|... + ..+..
T Consensus 311 -------------wd~~~~~~~--------------------~~~~~~~~~~-------~---------------~~l~~ 335 (447)
T 3dw8_B 311 -------------WDLNMENRP--------------------VETYQVHEYL-------R---------------SKLCS 335 (447)
T ss_dssp -------------EETTCCSSC--------------------SCCEESCGGG-------T---------------TTHHH
T ss_pred -------------EeCCCCccc--------------------cceeeccccc-------c---------------ccccc
Confidence 99986 555 3334443221 0 00000
Q ss_pred hccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC-------
Q psy467 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK------- 320 (845)
Q Consensus 248 ~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g------- 320 (845)
.. ..+ ....+..++|+|+++ +|++|+.||.|++||+.+++.+. +.+
T Consensus 336 ~~----------~~~-----------~i~~~~~~~~s~~~~-----~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~ 388 (447)
T 3dw8_B 336 LY----------END-----------CIFDKFECCWNGSDS-----VVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKP 388 (447)
T ss_dssp HH----------HTS-----------GGGCCCCEEECTTSS-----EEEEECSTTEEEEEETTTCCEEE-EECCSTTCCT
T ss_pred cc----------ccc-----------ccccceEEEECCCCC-----EEEEeccCCEEEEEEcCCCccee-eeeccccccc
Confidence 00 000 001123456666665 89999999999999999987763 222
Q ss_pred --------------------------CCCCEEEEEEeCCCCEEEEEeCCCEEEEEe
Q psy467 321 --------------------------NSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350 (845)
Q Consensus 321 --------------------------h~~~VtslafSpdG~~Lasgs~DGI~IWDl 350 (845)
+...|.+++|+|+|.+||+++.+++++|.-
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~ 444 (447)
T 3dw8_B 389 RTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQD 444 (447)
T ss_dssp TCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEEC
T ss_pred ccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecceeeeecc
Confidence 235688999999999999999999888874
No 106
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=4.3e-28 Score=274.46 Aligned_cols=248 Identities=24% Similarity=0.416 Sum_probs=214.0
Q ss_pred cceeee------eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 2 RAKVEK------AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 2 ~irlw~------l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
++++|+ +..+.+|.+.|.+++| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|++ .+|++
T Consensus 154 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s 228 (435)
T 1p22_A 154 TIKIWDKNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVT 228 (435)
T ss_dssp CEEEEESSSCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEE
T ss_pred eEEEEeCCCCeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEE
Confidence 367776 4578899999999999 578999999999999999999999999999999999999974 59999
Q ss_pred EECCCcEEEEECCCCcEE---EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEec
Q psy467 76 GCQSGSIKIWNLAVPTVQ---RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v---~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSP 152 (845)
|+.||.|++||+.++... ..+.+|...|.+++| +++++++|+.||.|++||+++++.+..+.+|...|.+++|+
T Consensus 229 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~- 305 (435)
T 1p22_A 229 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR- 305 (435)
T ss_dssp EETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE-
T ss_pred eeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC-
Confidence 999999999999987654 677889999999999 68899999999999999999999999999999999999995
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
++++++|+.||.|++ ||+++++. +..+.+|... +
T Consensus 306 -~~~l~~g~~dg~i~i-------------wd~~~~~~--------------------~~~~~~h~~~-------v----- 339 (435)
T 1p22_A 306 -DRLVVSGSSDNTIRL-------------WDIECGAC--------------------LRVLEGHEEL-------V----- 339 (435)
T ss_dssp -TTEEEEEETTSCEEE-------------EETTTCCE--------------------EEEECCCSSC-------E-----
T ss_pred -CCEEEEEeCCCeEEE-------------EECCCCCE--------------------EEEEeCCcCc-------E-----
Confidence 789999999999999 99998887 7777776665 5
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF 312 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~ 312 (845)
.++.| ++. +|++|+.||.|++||+.++
T Consensus 340 ----------------------~~~~~--~~~-----------------------------~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 340 ----------------------RCIRF--DNK-----------------------------RIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp ----------------------EEEEC--CSS-----------------------------EEEEEETTSCEEEEEHHHH
T ss_pred ----------------------EEEEe--cCC-----------------------------EEEEEeCCCcEEEEECCCC
Confidence 55555 444 8999999999999999766
Q ss_pred e---------EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEE
Q psy467 313 S---------LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDA 358 (845)
Q Consensus 313 ~---------~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~t 358 (845)
. ++..+.+|.+.|++++| ++.+|++|+.|| |++||+.+......
T Consensus 367 ~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 420 (435)
T 1p22_A 367 LDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQA 420 (435)
T ss_dssp TSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC---------
T ss_pred CCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 5 88999999999999999 788999999999 99999988755433
No 107
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.4e-28 Score=275.81 Aligned_cols=248 Identities=16% Similarity=0.139 Sum_probs=183.4
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEE-----EecCCCCCeEEEEEcC--------CCCEEEEEECCCcEEEEECCCCcEE
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIM-----SLSGHSTPVESVQFGN--------GEETLSAGCQSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~-----~l~~h~~~V~sLafSp--------dg~~LaSgs~DGtV~VWDl~tg~~v 93 (845)
++.+||+++.|++|+|||..+++... .+.+|.+.|++++|+| |+++||+|+.|++|+|||+.++..+
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 56689999999999999998876543 3578999999999998 7899999999999999999988888
Q ss_pred EEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEE-------------------------cCCCCCeEE
Q psy467 94 RTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTY-------------------------RGHSKSINS 147 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~-------------------------~~h~~~V~s 147 (845)
..+..|...|.+++|+|++ .+|++++.||+|++||+++++..... .+|...+.+
T Consensus 180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~ 259 (393)
T 4gq1_A 180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLAN 259 (393)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSE
T ss_pred eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccccee
Confidence 8888899999999999987 47999999999999999877543322 356778889
Q ss_pred EEEe-cCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceee
Q psy467 148 IRFS-PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKID 226 (845)
Q Consensus 148 LafS-Pdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~ 226 (845)
+.|+ +|++.+++++.|+.+++ ||+..+.. ...+..+...
T Consensus 260 v~~~~~dg~~l~s~s~d~~i~v-------------wd~~~~~~--------------------~~~l~~~~~~------- 299 (393)
T 4gq1_A 260 VRWIGSDGSGILAMCKSGAWLR-------------WNLFANND--------------------YNEISDSTMK------- 299 (393)
T ss_dssp EEEETTTTCEEEEECTTSEEEE-------------EEC------------------------------------------
T ss_pred eeeecCCCCEEEEEeCCCCEEE-------------EECccCCC--------------------CceEeeecCc-------
Confidence 9987 79999999999999999 99988766 2222222222
Q ss_pred EeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC-CCCcccceEEEEEeCCCeEE
Q psy467 227 VTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP-QSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 227 V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP-dg~~~~~~lLatgs~DG~I~ 305 (845)
+ ..+.+.++... ...........|+| .+.. ++++|+.||.|+
T Consensus 300 ~---------------------------~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~----~~~sgs~Dg~V~ 342 (393)
T 4gq1_A 300 L---------------------------GPKNLLPNVQG------ISLFPSLLGACPHPRYMDY----FATAHSQHGLIQ 342 (393)
T ss_dssp -------------------------------CCSCSEEE------ECSSCCSSCCEECSSCTTE----EEEEETTTTEEE
T ss_pred c---------------------------ccEEEcccccc------ccccCcceeEEEccCCCCE----EEEEECCCCEEE
Confidence 2 11122222110 00001112223333 2221 678888999999
Q ss_pred EEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEec
Q psy467 306 FWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351 (845)
Q Consensus 306 IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~ 351 (845)
+||+.+++++..+.+|..+|++++|||||++||+++.+|+.+|.+.
T Consensus 343 lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 343 LINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp EEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred EEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 9999999988888889999999999999999999999998887764
No 108
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.1e-26 Score=260.54 Aligned_cols=279 Identities=10% Similarity=0.092 Sum_probs=230.6
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEE-----EecCCCCCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIM-----SLSGHSTPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~-----~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
..+..+ ..+.+++|+| ++.++++++.++.|++||+.+++... .+.+|...|.+++|++++.++++++.|+.|+
T Consensus 117 ~~~~~~-~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~ 194 (433)
T 3bws_A 117 SRFKTG-FQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVH 194 (433)
T ss_dssp EEEECS-SCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEE
T ss_pred EEEcCC-CCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEE
Confidence 344444 4567999999 88899999999999999999998887 3457899999999999999999999999999
Q ss_pred EEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-
Q psy467 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG- 161 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs- 161 (845)
+||+++++.+..+..|...+.+++|+|+++++++++ .|+.|++||+++++.+..+.. ...+.+++|+|+++++++++
T Consensus 195 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 195 VFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp EEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEEEE
T ss_pred EEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEEEC
Confidence 999999999999988999999999999999886555 799999999999988888775 45699999999999999887
Q ss_pred -------CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 162 -------EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 162 -------~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
.|+.|++ ||+.+++. +..+. +... +
T Consensus 274 ~~~~~~~~dg~i~~-------------~d~~~~~~--------------------~~~~~-~~~~-------~------- 305 (433)
T 3bws_A 274 SASNQESGGGRLGI-------------YSMDKEKL--------------------IDTIG-PPGN-------K------- 305 (433)
T ss_dssp ESCTTCSCCEEEEE-------------EETTTTEE--------------------EEEEE-EEEC-------E-------
T ss_pred CCCccccCCCeEEE-------------EECCCCcE--------------------Eeecc-CCCC-------c-------
Confidence 4778888 99987765 32221 1111 2
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL 314 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~ 314 (845)
..++|+|++. . ++++++.|+.|++||+.+++.
T Consensus 306 --------------------~~~~~~~~g~------------------------~----l~~~~~~~~~v~v~d~~~~~~ 337 (433)
T 3bws_A 306 --------------------RHIVSGNTEN------------------------K----IYVSDMCCSKIEVYDLKEKKV 337 (433)
T ss_dssp --------------------EEEEECSSTT------------------------E----EEEEETTTTEEEEEETTTTEE
T ss_pred --------------------ceEEECCCCC------------------------E----EEEEecCCCEEEEEECCCCcE
Confidence 3445555543 1 567778999999999999998
Q ss_pred EEEecCCCCCEEEEEEeCCCCEEEEEeC---------------CC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceE
Q psy467 315 VSTTEKNSSTIRRLTFSEGGECLLGGDT---------------EG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLW 377 (845)
Q Consensus 315 l~tl~gh~~~VtslafSpdG~~Lasgs~---------------DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lL 377 (845)
+..+. +...+.+++|+|+|++|++++. || |++||+.+++.+..+.. ...+.+++|+ +|++|
T Consensus 338 ~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l 415 (433)
T 3bws_A 338 QKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYL 415 (433)
T ss_dssp EEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEE
T ss_pred EEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEE
Confidence 88876 5678999999999999998876 57 99999999998888876 4679999999 88888
Q ss_pred EEE------EEEEeeCC
Q psy467 378 FRR------VGTWSHQD 388 (845)
Q Consensus 378 aaS------VsiW~~d~ 388 (845)
+++ +.+|.+++
T Consensus 416 ~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 416 VISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEETTTTEEEEEEETT
T ss_pred EEEECCCCeEEEEEecC
Confidence 766 88997753
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=3.4e-27 Score=255.04 Aligned_cols=242 Identities=14% Similarity=0.164 Sum_probs=204.6
Q ss_pred eEEeccCCCcEEEEEEecCCCC-EEEEEeCCCeEEEEEC-CCCeeEEEecC--CCCCeEEEEEcCCCCEEEEEECCCcEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQ-VLATGGDDKKVNLWAL-GKSNCIMSLSG--HSTPVESVQFGNGEETLSAGCQSGSIK 83 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~-~LaTgs~DG~I~IWdl-~t~~~i~~l~~--h~~~V~sLafSpdg~~LaSgs~DGtV~ 83 (845)
+..+.+|...|.+++|+| +++ +|++|+.||.|++|++ .+++. ..+.+ |...|.+++|+| +++|++++.|+.|+
T Consensus 49 ~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~ 125 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFID-NTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIE 125 (342)
T ss_dssp EEEEEECSSCEEEEEEEE-SSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEE
T ss_pred ceeeeecCCceEEEEECC-CCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEE
Confidence 455678999999999999 899 9999999999999999 77654 77888 999999999999 99999999999999
Q ss_pred EEECCC---------CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC-Cc--eEEEEcCCCCCeEEEEEe
Q psy467 84 IWNLAV---------PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-KG--CIYTYRGHSKSINSIRFS 151 (845)
Q Consensus 84 VWDl~t---------g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t-~~--~l~~~~~h~~~V~sLafS 151 (845)
+||+.+ ++.+..+. |...|.+++|++++ +++++.|+.|++||+++ +. .......|...+.+++|+
T Consensus 126 iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~ 202 (342)
T 1yfq_A 126 VIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL 202 (342)
T ss_dssp EECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC
T ss_pred EEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEEC
Confidence 999987 66666666 88999999999887 99999999999999987 54 334455688899999999
Q ss_pred c-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCC------ccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccce
Q psy467 152 P-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLV------HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAK 224 (845)
Q Consensus 152 P-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg------~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~ 224 (845)
| +++++++++.||.+++ |++... +. ...+..|...
T Consensus 203 ~~~~~~l~~~~~dg~i~i-------------~~~~~~~~~~~~~~--------------------~~~~~~~~~~----- 244 (342)
T 1yfq_A 203 PKEQEGYACSSIDGRVAV-------------EFFDDQGDDYNSSK--------------------RFAFRCHRLN----- 244 (342)
T ss_dssp SGGGCEEEEEETTSEEEE-------------EECCTTCCSTTCTT--------------------CEEEECCCCC-----
T ss_pred CCCCCEEEEEecCCcEEE-------------EEEcCCCccccccc--------------------ceeeeccccc-----
Confidence 9 9999999999999999 999876 22 3444444321
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
. .+ ..+...|.+++|+|+++ +|++|+.||.|
T Consensus 245 --~----------------------------------~~--------~~~~~~i~~~~~s~~~~-----~l~~~~~dg~i 275 (342)
T 1yfq_A 245 --L----------------------------------KD--------TNLAYPVNSIEFSPRHK-----FLYTAGSDGII 275 (342)
T ss_dssp --T----------------------------------TC--------CSSCCCEEEEEECTTTC-----CEEEEETTSCE
T ss_pred --c----------------------------------cc--------cccceeEEEEEEcCCCC-----EEEEecCCceE
Confidence 0 00 01234566677777776 89999999999
Q ss_pred EEEECCCCeEEEEecCC-CCCEEEEEEeCCCCEEEEEeCCC
Q psy467 305 NFWDLEKFSLVSTTEKN-SSTIRRLTFSEGGECLLGGDTEG 344 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~gh-~~~VtslafSpdG~~Lasgs~DG 344 (845)
++||+.+++++..+.+| ...|++++ |+|++|++++.|+
T Consensus 276 ~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 276 SCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp EEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECT
T ss_pred EEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCC
Confidence 99999999999999998 99999999 9999999999998
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.7e-26 Score=255.32 Aligned_cols=285 Identities=11% Similarity=0.045 Sum_probs=203.8
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEE-EEEECCCcEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL-SAGCQSGSIKIWN 86 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~L-aSgs~DGtV~VWD 86 (845)
++++.+|.+.|+|++|+| +|++||+|+.++ ++||+..+++.......+ .+..+++.++++.+ ++++.|++|++||
T Consensus 12 ~~~~~~h~~~V~~v~fs~-dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQ-DQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp -------CCCCCEEEECT-TSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred ccccccCCCceEEEEECC-CCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 446789999999999999 999999998775 789999887766654432 58888999988887 4567789999999
Q ss_pred CCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-ceEEEEcCCCCCeEEEEEecCCCEEEE--EeCC
Q psy467 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSPDGQWIAS--GGED 163 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-~~l~~~~~h~~~V~sLafSPdg~~Las--gs~D 163 (845)
+.+++.+..+. +...|.+++|+++. ++++ .|+.|++||+.++ +.+..+.. ....+++++ .++++ |+.|
T Consensus 88 ~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~ 158 (355)
T 3vu4_A 88 DVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNL 158 (355)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCT
T ss_pred CCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcC
Confidence 99999999887 66789999998764 4444 4789999999987 66655543 445567776 66666 5789
Q ss_pred CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCe-EEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSL-RKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~-l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
|.|++ ||+.++......... ..... -.. +..+.+|
T Consensus 159 g~v~i-------------wd~~~~~~~~~~~~~-~~~~~----~~p~~~~~~~h-------------------------- 194 (355)
T 3vu4_A 159 GQIHI-------------TKLQSSGSATTQDQG-VQQKA----ILGKGVLIKAH-------------------------- 194 (355)
T ss_dssp TCEEE-------------EECCC-----------------------CCEEECCC--------------------------
T ss_pred cEEEE-------------EECCCCCcccccccc-ccccc----cCcccEEEEcc--------------------------
Confidence 99999 999876641100000 00000 000 1122222
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCe-EEEEECCCCeEEEEec-C
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRT-VNFWDLEKFSLVSTTE-K 320 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~-I~IWDl~s~~~l~tl~-g 320 (845)
...|++++|+|+|+ +|++|+.|++ |++||+.+++++.++. +
T Consensus 195 --------------------------------~~~v~~~~~s~~g~-----~l~s~s~d~~~v~iwd~~~~~~~~~~~~g 237 (355)
T 3vu4_A 195 --------------------------------TNPIKMVRLNRKSD-----MVATCSQDGTIIRVFKTEDGVLVREFRRG 237 (355)
T ss_dssp --------------------------------SSCEEEEEECTTSS-----EEEEEETTCSEEEEEETTTCCEEEEEECT
T ss_pred --------------------------------CCceEEEEECCCCC-----EEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 34566666666666 9999999998 9999999999999998 5
Q ss_pred -CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceE--EEec---------------------CCCCCeEEEEEc-CC
Q psy467 321 -NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQY--DAQP---------------------MGWGKVQDLAVT-GT 374 (845)
Q Consensus 321 -h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l--~tl~---------------------~h~~~VtsVafS-dg 374 (845)
|...|++++|+|+|++|++++.|+ |+|||+..+... ..+. .+......++|+ ++
T Consensus 238 ~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~ 317 (355)
T 3vu4_A 238 LDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISES 317 (355)
T ss_dssp TCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSS
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCC
Confidence 999999999999999999999999 999999765311 1111 112234678999 88
Q ss_pred ceEEEE-----EEEEee
Q psy467 375 QLWFRR-----VGTWSH 386 (845)
Q Consensus 375 ~lLaaS-----VsiW~~ 386 (845)
+.|+++ +.+|.+
T Consensus 318 ~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 318 SLVVVWPHTRMIETFKV 334 (355)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred CEEEEEeCCCeEEEEEE
Confidence 888887 777754
No 111
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=1.1e-26 Score=263.16 Aligned_cols=283 Identities=17% Similarity=0.217 Sum_probs=223.6
Q ss_pred CcEEEEEEecCCC---------CEEEEEeC----CCeEEEEECC--------------------------CCee-EEEec
Q psy467 16 ASVNCLALGKKSG---------QVLATGGD----DKKVNLWALG--------------------------KSNC-IMSLS 55 (845)
Q Consensus 16 ~~V~~LafSp~dg---------~~LaTgs~----DG~I~IWdl~--------------------------t~~~-i~~l~ 55 (845)
-+..|+.|.|+.. .++++|+. ...|.++++. +++. .....
T Consensus 46 wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 125 (430)
T 2xyi_A 46 WPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKI 125 (430)
T ss_dssp SCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEE
T ss_pred CCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEE
Confidence 3678899988321 46777754 3467777532 1111 24455
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEECCCcEEEEECCC----------CcEEEEEcCCCCCeEEEEEccCCC-EEEEEECCCe
Q psy467 56 GHSTPVESVQFGNG-EETLSAGCQSGSIKIWNLAV----------PTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSF 123 (845)
Q Consensus 56 ~h~~~V~sLafSpd-g~~LaSgs~DGtV~VWDl~t----------g~~v~~l~~h~~~V~~lafspdg~-~Lasgs~DG~ 123 (845)
.|.+.|++++|+|+ +.+|++++.+|.|++||+.+ ...+..+.+|...|.+++|+|++. +|++|+.||.
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 205 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHT 205 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSC
T ss_pred cCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCe
Confidence 69999999999997 78999999999999999986 567788889999999999999988 9999999999
Q ss_pred EEEEECCCCce-------EEEEcCCCCCeEEEEEec-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCC
Q psy467 124 IKLWDLRRKGC-------IYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPP 195 (845)
Q Consensus 124 I~IWDl~t~~~-------l~~~~~h~~~V~sLafSP-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~ 195 (845)
|++||+.++.. ...+..|...|.+++|+| ++.+|++++.||.|++ ||++++...
T Consensus 206 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i-------------~d~~~~~~~----- 267 (430)
T 2xyi_A 206 ICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMI-------------WDTRNNNTS----- 267 (430)
T ss_dssp EEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEE-------------EETTCSCSS-----
T ss_pred EEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEE-------------EECCCCCCC-----
Confidence 99999987322 456778999999999999 7789999999999999 999876420
Q ss_pred CCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccc
Q psy467 196 QYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVS 275 (845)
Q Consensus 196 ~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~ 275 (845)
..+..+..|... + .+++|+|++
T Consensus 268 ------------~~~~~~~~~~~~-------v---------------------------~~i~~~p~~------------ 289 (430)
T 2xyi_A 268 ------------KPSHTVDAHTAE-------V---------------------------NCLSFNPYS------------ 289 (430)
T ss_dssp ------------SCSEEEECCSSC-------E---------------------------EEEEECSSC------------
T ss_pred ------------cceeEeecCCCC-------e---------------------------EEEEeCCCC------------
Confidence 003333344433 3 445555544
Q ss_pred cCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC-CeEEEEecCCCCCEEEEEEeCCCC-EEEEEeCCC-EEEEEecC
Q psy467 276 VSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK-FSLVSTTEKNSSTIRRLTFSEGGE-CLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 276 ~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s-~~~l~tl~gh~~~VtslafSpdG~-~Lasgs~DG-I~IWDl~t 352 (845)
+. ++++|+.||.|++||+++ ..++..+.+|...|++++|+|+++ +|++++.|+ |+|||+..
T Consensus 290 ------------~~----~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 290 ------------EF----ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ------------TT----EEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred ------------CC----EEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 32 799999999999999998 567888999999999999999985 689999999 99999987
Q ss_pred --------------CceEEEecCCCCCeEEEEEc-CCc-eEEEE-----EEEEeeCCCC
Q psy467 353 --------------ARQYDAQPMGWGKVQDLAVT-GTQ-LWFRR-----VGTWSHQDSG 390 (845)
Q Consensus 353 --------------gk~l~tl~~h~~~VtsVafS-dg~-lLaaS-----VsiW~~d~~~ 390 (845)
.+.+..+.+|...|++++|+ ++. +++++ |.+|.++...
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 354 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp TTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred CccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 36778888999999999999 777 55555 8999876443
No 112
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2e-27 Score=260.41 Aligned_cols=226 Identities=13% Similarity=0.121 Sum_probs=182.8
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC---------CCcEEEEEc
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA---------VPTVQRTLN 97 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~---------tg~~v~~l~ 97 (845)
++.+|++|+.||.|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+.. +++.+..+.
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~ 121 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE 121 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEee
Confidence 67899999999999999999999888876 467888889988 9999999999999665 555454443
Q ss_pred -CCCCCeEEEEEcc--CCCEEEEEECCCeEEEEECCCCceEEEEcC-CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeec
Q psy467 98 -GHKSSITSVDFHP--YGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-HSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173 (845)
Q Consensus 98 -~h~~~V~~lafsp--dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~ 173 (845)
.|...|.+++|+| ++++|++++.||.|++||+++++++..... +...+.+++|+|++.+|++|+.||.|++
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i----- 196 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV----- 196 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE-----
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE-----
Confidence 6778899999999 999999999999999999999988776643 5558999999999999999999999999
Q ss_pred cCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeE-EEEec-CCCCCccceeeEeeecccccccccccchhhhhhccC
Q psy467 174 LTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLR-KSFTK-GRPGGTKAKIDVTRIEENAESEDQAGEEELFATIAN 251 (845)
Q Consensus 174 ~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l-~~~~~-h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~ 251 (845)
||+++++. + ..+.. |... |
T Consensus 197 --------wd~~~~~~--------------------~~~~~~~~h~~~-------v------------------------ 217 (343)
T 3lrv_A 197 --------YNLSSPDQ--------------------ASSRFPVDEEAK-------I------------------------ 217 (343)
T ss_dssp --------EESSCTTS--------------------CCEECCCCTTSC-------E------------------------
T ss_pred --------EECCCCCC--------------------CccEEeccCCCC-------E------------------------
Confidence 99998876 3 34444 4444 4
Q ss_pred CCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC---CCCCEE--
Q psy467 252 PCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK---NSSTIR-- 326 (845)
Q Consensus 252 ~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g---h~~~Vt-- 326 (845)
.+++|+|++. +|++++ |+.|++||+++++.+..+.. |...+.
T Consensus 218 ---~~l~fs~~g~-----------------------------~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 264 (343)
T 3lrv_A 218 ---KEVKFADNGY-----------------------------WMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTV 264 (343)
T ss_dssp ---EEEEECTTSS-----------------------------EEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCE
T ss_pred ---EEEEEeCCCC-----------------------------EEEEEe-CCeEEEEEcCCCCcceeecccccccccccce
Confidence 5555655555 899999 55999999998876555443 333444
Q ss_pred EEEEeCCCCEEEEEeC-CC-EEEEEecCCc
Q psy467 327 RLTFSEGGECLLGGDT-EG-LKVYGWEPAR 354 (845)
Q Consensus 327 slafSpdG~~Lasgs~-DG-I~IWDl~tgk 354 (845)
+++|+|+|++|++++. |+ |+||+++...
T Consensus 265 ~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 265 TYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred EEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 6999999999999998 88 9999997653
No 113
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.7e-27 Score=271.03 Aligned_cols=269 Identities=10% Similarity=0.105 Sum_probs=206.7
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEE-----------------E----------EECCCCeeEEEec-CCCCCeEE
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVN-----------------L----------WALGKSNCIMSLS-GHSTPVES 63 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~-----------------I----------Wdl~t~~~i~~l~-~h~~~V~s 63 (845)
+.....|.+++|+| ||+++|+++.|++|+ + |++.+++....+. .|...|.+
T Consensus 12 ~~~~~~v~sv~~Sp-DG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~ 90 (588)
T 2j04_A 12 KEFEDWKNNLTWAR-DGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRV 90 (588)
T ss_dssp CCCSSSSCCEEECT-TSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEE
T ss_pred hHhhccEEEEEECC-CCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEE
Confidence 34568899999999 999999999999994 1 2222222111222 46788999
Q ss_pred EEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCC-----CeEEEEEccCCCEEEEEECCCeEEEEECCCCc-----
Q psy467 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKS-----SITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG----- 133 (845)
Q Consensus 64 LafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~-----~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~----- 133 (845)
++|||+|++||+++.||.|++||.++ ++..+. |.. .|.+++|||||++|++|+.||+|++||+.++.
T Consensus 91 vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 91 CKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPE 167 (588)
T ss_dssp EEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccc
Confidence 99999999999999999999999654 666677 665 49999999999999999999999999999875
Q ss_pred --eEEEE----cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCC
Q psy467 134 --CIYTY----RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNT 207 (845)
Q Consensus 134 --~l~~~----~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg 207 (845)
.+.++ .+|...|.+++|+||| +++++.|+.+++ ||+..+....
T Consensus 168 ~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrl-------------Wd~~~~~~~~---------------- 216 (588)
T 2j04_A 168 FYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFS-------------MTVSASSHQP---------------- 216 (588)
T ss_dssp CEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEE-------------ECCCSSSSCC----------------
T ss_pred ceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEE-------------EECCCCcccc----------------
Confidence 35676 5677899999999999 888999999999 9998766400
Q ss_pred CeEEEEe-cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC
Q psy467 208 SLRKSFT-KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ 286 (845)
Q Consensus 208 ~~l~~~~-~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd 286 (845)
....+. +|... | ..++|+ +.
T Consensus 217 -~~~tL~~~h~~~-------V---------------------------~svaFs--g~---------------------- 237 (588)
T 2j04_A 217 -VSRMIQNASRRK-------I---------------------------TDLKIV--DY---------------------- 237 (588)
T ss_dssp -CEEEEECCCSSC-------C---------------------------CCEEEE--TT----------------------
T ss_pred -ceeeecccccCc-------E---------------------------EEEEEE--CC----------------------
Confidence 023332 34333 4 555555 34
Q ss_pred CCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEE--eCCCCEEEEEeCCCEEEEEecC------C-----
Q psy467 287 SPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTF--SEGGECLLGGDTEGLKVYGWEP------A----- 353 (845)
Q Consensus 287 g~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vtslaf--SpdG~~Lasgs~DGI~IWDl~t------g----- 353 (845)
.+|+++ ++.|++||+.+++......+|...|..++| +||+..|++++.+|.++|..+. +
T Consensus 238 -------~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~klw~~d~~~~spd~~l~a~ 309 (588)
T 2j04_A 238 -------KVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSYKVLLEDELHVTADNIIAPY 309 (588)
T ss_dssp -------EEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEEEEEESSSEEEECCCSSHHH
T ss_pred -------EEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCCEEEeeccEEECCCceEEEE
Confidence 788887 699999999988875444489999999999 9999999999988878888631 1
Q ss_pred ------------ceEEEecCCCCCeEEEEEc-CCceEEEEEEE
Q psy467 354 ------------RQYDAQPMGWGKVQDLAVT-GTQLWFRRVGT 383 (845)
Q Consensus 354 ------------k~l~tl~~h~~~VtsVafS-dg~lLaaSVsi 383 (845)
..+..+.+ ...|.+++|| ||+.+|++-.+
T Consensus 310 ~d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPdG~~lA~~~~i 351 (588)
T 2j04_A 310 LEKKFKKWSTIWNEFNNYET-TLVIHGISLSPDGYSIAIVYDM 351 (588)
T ss_dssp HHHHHHHTTTTTTSSSSSCC-EEEEEEEEECTTSSEEEEEEEE
T ss_pred cCCEEEEEECCCCceeeecc-ceEEEEEEECCCCCEEEEEEec
Confidence 11122222 3459999999 99999888444
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=4e-25 Score=244.42 Aligned_cols=257 Identities=14% Similarity=0.145 Sum_probs=212.3
Q ss_pred CEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEE-EEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEE
Q psy467 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL-SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVD 107 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~L-aSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~la 107 (845)
.++++++.|+.|++||+.+++.+..+..|. .+.+++|+|++++| ++++.++.|++||+.+++.+..+..+. .+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 468888999999999999999999988765 58999999999987 566689999999999999998888555 899999
Q ss_pred EccCCCEEEEEE-CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEE-EEEeCCCcEEEeeeeccCCceeEEEECC
Q psy467 108 FHPYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWI-ASGGEDGVVRIGASFHLTNTSIHVVDLS 185 (845)
Q Consensus 108 fspdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~L-asgs~DG~I~I~~~~~~~~~~I~vWDl~ 185 (845)
|+|++++|++++ .++.|++||+.+++.+..+.. ...+.+++|+|+++++ ++++.++.|++ ||+.
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~-------------~d~~ 146 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSV-------------INTV 146 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEE-------------EETT
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEE-------------EECC
Confidence 999999886555 679999999999998888874 4568999999999987 67778999999 9998
Q ss_pred CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCc
Q psy467 186 LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSL 265 (845)
Q Consensus 186 tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~ 265 (845)
+++. +..+..+.. + ..++|+|++.
T Consensus 147 ~~~~--------------------~~~~~~~~~--------~---------------------------~~~~~~~dg~- 170 (391)
T 1l0q_A 147 TKAV--------------------INTVSVGRS--------P---------------------------KGIAVTPDGT- 170 (391)
T ss_dssp TTEE--------------------EEEEECCSS--------E---------------------------EEEEECTTSS-
T ss_pred CCcE--------------------EEEEecCCC--------c---------------------------ceEEECCCCC-
Confidence 8776 444333221 1 4455555554
Q ss_pred CCCCcccccccCceeEEEcCCCCcccceEE-EEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEe---
Q psy467 266 NRSGTCVPVSVSRTSLSILPQSPMLCFILT-TSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGD--- 341 (845)
Q Consensus 266 ~~~~~~~~~~~~I~slafSPdg~~~~~~lL-atgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs--- 341 (845)
.+ ++++.++.|++||+.+++.+..+.. ...+.+++|+|+|++|++++
T Consensus 171 ----------------------------~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~ 221 (391)
T 1l0q_A 171 ----------------------------KVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDK 221 (391)
T ss_dssp ----------------------------EEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEECS
T ss_pred ----------------------------EEEEEeCCCCEEEEEECCCCeEEEEEec-CCCccceEECCCCCEEEEEecCc
Confidence 55 6778899999999999988887764 56799999999999999888
Q ss_pred CCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE------EEEEeeC
Q psy467 342 TEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR------VGTWSHQ 387 (845)
Q Consensus 342 ~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS------VsiW~~d 387 (845)
.++ |++||+.+++.+..+..|. .+.+++|+ ++++++++ +.+|...
T Consensus 222 ~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 222 YFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp SCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 577 9999999999888888765 58899999 88877544 8899765
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.7e-26 Score=259.10 Aligned_cols=269 Identities=13% Similarity=0.107 Sum_probs=207.6
Q ss_pred EeccCCCcEEEEEEecCCCCEE-EEEeCCCeEEEEECC--CCeeEEEec--CCCCCeEEEEEcCCCCEEEEEECCCcEEE
Q psy467 10 DFMAHGASVNCLALGKKSGQVL-ATGGDDKKVNLWALG--KSNCIMSLS--GHSTPVESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~L-aTgs~DG~I~IWdl~--t~~~i~~l~--~h~~~V~sLafSpdg~~LaSgs~DGtV~V 84 (845)
...+|.+.|++++|+| ++++| ++|+.||.|+||++. +++.+..+. .|...|.+++|+|++++|++|+.+|.|++
T Consensus 97 ~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~ 175 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYS 175 (450)
T ss_dssp ---CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEE
Confidence 3457888999999999 88886 899999999999998 888888876 57789999999999999999999999999
Q ss_pred EECCCCcEEE----EEcCCCCCeEEEEEccC---CCEEEEEECCCeEEEEECCCCceEEE-EcCCCCCeEEEEEecCCCE
Q psy467 85 WNLAVPTVQR----TLNGHKSSITSVDFHPY---GDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 85 WDl~tg~~v~----~l~~h~~~V~~lafspd---g~~Lasgs~DG~I~IWDl~t~~~l~~-~~~h~~~V~sLafSPdg~~ 156 (845)
|++.++.... .+.+|...|.+++|+|+ +++|++|+.|+.|++||+.++.++.. +.+|...|.+++|+ ++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~ 254 (450)
T 2vdu_B 176 IDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYL 254 (450)
T ss_dssp EETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTE
T ss_pred EecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCE
Confidence 9998876543 66779999999999999 99999999999999999999988877 55899999999999 9999
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
|++++.|+.|++ ||+.+++. +..+..+... .. +
T Consensus 255 l~s~~~d~~v~v-------------wd~~~~~~--------------------~~~~~~~~~~---~~--~--------- 287 (450)
T 2vdu_B 255 LLSAGGDDKIFA-------------WDWKTGKN--------------------LSTFDYNSLI---KP--Y--------- 287 (450)
T ss_dssp EEEEESSSEEEE-------------EETTTCCE--------------------EEEEECHHHH---GG--G---------
T ss_pred EEEEeCCCeEEE-------------EECCCCcE--------------------eeeecchhhh---hh--h---------
Confidence 999999999999 99998887 4444321100 00 0
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEEC--CCC-
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDL--EKF- 312 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl--~s~- 312 (845)
...... ....|..... ......+.+++|+|+++ ++++++ .|+.|++||+ .++
T Consensus 288 --------~~~~~~----~~~~~~~~~~-------~~~~~~v~~i~~~~~~~-----~l~~~~~~d~~i~iw~~~~~~~~ 343 (450)
T 2vdu_B 288 --------LNDQHL----APPRFQNENN-------DIIEFAVSKIIKSKNLP-----FVAFFVEATKCIIILEMSEKQKG 343 (450)
T ss_dssp --------CCTTSB----C-----------------CBCCCEEEEEECSSSS-----EEEEEETTCSEEEEEEECSSSTT
T ss_pred --------hhhccc----cccccccccc-------ccceEEEEEEEEeCCCC-----EEEEEECCCCeEEEEEeccCCCC
Confidence 000000 0000000000 01234577888888888 888888 8999999999 555
Q ss_pred --eEEEEecCCCCCEEEEEEeCCCCEEEEEeC------CC-EEEEEecC
Q psy467 313 --SLVSTTEKNSSTIRRLTFSEGGECLLGGDT------EG-LKVYGWEP 352 (845)
Q Consensus 313 --~~l~tl~gh~~~VtslafSpdG~~Lasgs~------DG-I~IWDl~t 352 (845)
+.+..+..| +.|.+++|+|++.++++++. +. |.+|.++.
T Consensus 344 ~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 344 DLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp CEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred ceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 778888887 88999999996544444443 34 88988764
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=4.3e-26 Score=247.36 Aligned_cols=256 Identities=15% Similarity=0.214 Sum_probs=204.5
Q ss_pred ceeeee--------EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEE--cCCCCE
Q psy467 3 AKVEKA--------EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF--GNGEET 72 (845)
Q Consensus 3 irlw~l--------~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLaf--Spdg~~ 72 (845)
+++|++ ..+.+|.+.|++++|+| ++++|++++.||.|++||+.+++.+. +..|...|.+++| ++++.+
T Consensus 66 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~ 143 (368)
T 3mmy_A 66 VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSD-DGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSC 143 (368)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEE
T ss_pred EEEEEcCCCCceeEEEeccccCCEEEEEECc-CCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCE
Confidence 567764 56889999999999999 99999999999999999999988776 5569999999999 899999
Q ss_pred EEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc--CCCCCeEEEEE
Q psy467 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR--GHSKSINSIRF 150 (845)
Q Consensus 73 LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~--~h~~~V~sLaf 150 (845)
|++++.||.|++||+.+++.+..+..+. .+.++.+. ...+++++.++.+.+|+++......... .+...+.++++
T Consensus 144 l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (368)
T 3mmy_A 144 VMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAI 220 (368)
T ss_dssp EEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEE
T ss_pred EEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEE
Confidence 9999999999999999999888888654 56666666 4588999999999999998765443332 24456677777
Q ss_pred ecCCCE----EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceee
Q psy467 151 SPDGQW----IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKID 226 (845)
Q Consensus 151 SPdg~~----Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~ 226 (845)
.++... +++++.||.|++ ||+...... ..+..+.+|...
T Consensus 221 ~~~~~~~~~~~~~~~~dg~i~i-------------~~~~~~~~~-----------------~~~~~~~~~~~~------- 263 (368)
T 3mmy_A 221 FKDKQNKPTGFALGSIEGRVAI-------------HYINPPNPA-----------------KDNFTFKCHRSN------- 263 (368)
T ss_dssp EECTTSCEEEEEEEETTSEEEE-------------EESSCSCHH-----------------HHSEEEECSEEC-------
T ss_pred cccCCCCCCeEEEecCCCcEEE-------------EecCCCCcc-----------------ccceeeeeeecc-------
Confidence 766554 999999999999 999876320 003333333221
Q ss_pred EeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEE
Q psy467 227 VTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNF 306 (845)
Q Consensus 227 V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~I 306 (845)
. . ......+...|++++|+|+++ +|++|+.||.|++
T Consensus 264 ~---------------------------~------------~~~~~~~~~~v~~~~~sp~~~-----~l~s~~~dg~i~i 299 (368)
T 3mmy_A 264 G---------------------------T------------NTSAPQDIYAVNGIAFHPVHG-----TLATVGSDGRFSF 299 (368)
T ss_dssp -------------------------------------------CCCEEECCEEEEEECTTTC-----CEEEEETTSCEEE
T ss_pred c---------------------------c------------cccccccccceEEEEEecCCC-----EEEEEccCCeEEE
Confidence 0 0 000112234577788888877 8999999999999
Q ss_pred EECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC
Q psy467 307 WDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344 (845)
Q Consensus 307 WDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG 344 (845)
||+.+++++..+.+|...|++++|+|+|++|++++.|+
T Consensus 300 wd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 300 WDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp EETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCC
T ss_pred EECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccc
Confidence 99999999999999999999999999999999999987
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=7.4e-25 Score=242.28 Aligned_cols=260 Identities=12% Similarity=0.126 Sum_probs=209.9
Q ss_pred ceeeee------EEeccCCCcEEEEEEecCCCCEE-EEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE
Q psy467 3 AKVEKA------EDFMAHGASVNCLALGKKSGQVL-ATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 3 irlw~l------~~L~gH~~~V~~LafSp~dg~~L-aTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS 75 (845)
+++|++ +.+.+|. .+.+++|+| +++++ ++++.|+.|++||+.+++.+..+..+. .+.+++|+|++++|++
T Consensus 14 v~v~d~~~~~~~~~~~~~~-~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~ 90 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIPVGS-NPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYV 90 (391)
T ss_dssp EEEEETTTTEEEEEEECSS-SEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEE
T ss_pred EEEEECCCCeEEEEeecCC-CcceEEECC-CCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEE
Confidence 566763 4566664 599999999 88766 677789999999999999998888655 8999999999998865
Q ss_pred EE-CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEE-EEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecC
Q psy467 76 GC-QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153 (845)
Q Consensus 76 gs-~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~L-asgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPd 153 (845)
++ .++.|++||+.+++.+..+..+ ..+.+++|+|+++++ ++++.++.|++||+.+++.+..+..+ ..+.+++|+|+
T Consensus 91 ~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~d 168 (391)
T 1l0q_A 91 TNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPD 168 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTT
T ss_pred EECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCC
Confidence 54 5799999999999988888754 468999999999977 67778999999999999998888755 45799999999
Q ss_pred CCEE-EEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 154 GQWI-ASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 154 g~~L-asgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
++++ ++++.++.|++ ||+.+++. +..+..+ .. +
T Consensus 169 g~~l~~~~~~~~~v~~-------------~d~~~~~~--------------------~~~~~~~-~~-------~----- 202 (391)
T 1l0q_A 169 GTKVYVANFDSMSISV-------------IDTVTNSV--------------------IDTVKVE-AA-------P----- 202 (391)
T ss_dssp SSEEEEEETTTTEEEE-------------EETTTTEE--------------------EEEEECS-SE-------E-----
T ss_pred CCEEEEEeCCCCEEEE-------------EECCCCeE--------------------EEEEecC-CC-------c-----
Confidence 9987 56778899999 99987766 3333211 11 2
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe---CCCeEEEEEC
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS---ADRTVNFWDL 309 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs---~DG~I~IWDl 309 (845)
..++|+|++. ++++++ .++.|++||+
T Consensus 203 ----------------------~~~~~~~~g~-----------------------------~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 203 ----------------------SGIAVNPEGT-----------------------------KAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp ----------------------EEEEECTTSS-----------------------------EEEEEEECSSCCEEEEEET
T ss_pred ----------------------cceEECCCCC-----------------------------EEEEEecCcCCCcEEEEEC
Confidence 4445555554 777776 6899999999
Q ss_pred CCCeEEEEecCCCCCEEEEEEeCCCCEE-EEEeCCC-EEEEEecCCceEEEecCCCCC
Q psy467 310 EKFSLVSTTEKNSSTIRRLTFSEGGECL-LGGDTEG-LKVYGWEPARQYDAQPMGWGK 365 (845)
Q Consensus 310 ~s~~~l~tl~gh~~~VtslafSpdG~~L-asgs~DG-I~IWDl~tgk~l~tl~~h~~~ 365 (845)
.+++.+..+..|. .+.+++|+|+|++| ++++.|+ |++||+.+++.+..+..|..+
T Consensus 232 ~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~ 288 (391)
T 1l0q_A 232 GTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNP 288 (391)
T ss_dssp TTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSE
T ss_pred CCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCC
Confidence 9999998888764 58999999999988 5667788 999999999998888776543
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=9.1e-27 Score=261.14 Aligned_cols=298 Identities=12% Similarity=0.106 Sum_probs=197.0
Q ss_pred CcEEEEEEe---cCCCCEEEEEeCCCeEEEEECCCC----------eeEEEecCCCCCeEEEEEc---------------
Q psy467 16 ASVNCLALG---KKSGQVLATGGDDKKVNLWALGKS----------NCIMSLSGHSTPVESVQFG--------------- 67 (845)
Q Consensus 16 ~~V~~LafS---p~dg~~LaTgs~DG~I~IWdl~t~----------~~i~~l~~h~~~V~sLafS--------------- 67 (845)
....++.|. ++..+++++|. ++.|.+|+.... ..+..+ .+...+..+.|+
T Consensus 16 ~~p~~~~w~~~~~~~~~l~a~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (393)
T 4gq1_A 16 VRPYTTTWCSQSPSCSNLLAIGH-DTGITIYCASEEQTPGSTGLTLQELFTI-QTGLPTLHLSFSSSCSYSENLHDGDGN 93 (393)
T ss_dssp CCEEEEEECTTSGGGTTEEEEEE-SSEEEEEEEEECCSSSCCSEEEEEEEEE-ECSSCEEEEEECTTCEEECC-------
T ss_pred CCCeEEEEeCCCCCCCCEEEEEC-CCCEEEEECCCCCcccccccceeeeEEE-ecCCCeeeEeecCCccccccccCCCcc
Confidence 445667774 43445666654 778999975211 111112 244445555544
Q ss_pred -----CCCCEEEEEECCCcEEEEECCCCcEEE-----EEcCCCCCeEEEEEcc--------CCCEEEEEECCCeEEEEEC
Q psy467 68 -----NGEETLSAGCQSGSIKIWNLAVPTVQR-----TLNGHKSSITSVDFHP--------YGDYLCSGSLDSFIKLWDL 129 (845)
Q Consensus 68 -----pdg~~LaSgs~DGtV~VWDl~tg~~v~-----~l~~h~~~V~~lafsp--------dg~~Lasgs~DG~I~IWDl 129 (845)
+++.+|++++.|++|++||++++.... .+.+|.+.|++++|+| |+++|++|+.|++|++||+
T Consensus 94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 455689999999999999999886543 3578999999999998 7899999999999999999
Q ss_pred CCCceEEEEcCCCCCeEEEEEecCC-CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC
Q psy467 130 RRKGCIYTYRGHSKSINSIRFSPDG-QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS 208 (845)
Q Consensus 130 ~t~~~l~~~~~h~~~V~sLafSPdg-~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~ 208 (845)
.++.++..+..|...+.+++|+|++ ++|++++.|+.|++ ||+++++.....
T Consensus 174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~-------------wd~~t~~~~~~~--------------- 225 (393)
T 4gq1_A 174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRI-------------FDWTLNLSAEEN--------------- 225 (393)
T ss_dssp ETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEE-------------EETTCCC--------------------
T ss_pred CCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEE-------------EECCCCcccccc---------------
Confidence 9888888888899999999999987 47999999999999 999988762211
Q ss_pred eEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEc-CCC
Q psy467 209 LRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSIL-PQS 287 (845)
Q Consensus 209 ~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafS-Pdg 287 (845)
..+...... ..+.+..... ........+...+.+++|+ +|+
T Consensus 226 -----~~~~~~~~~--------------------------------~~~s~~~~~~-~~~~~~~~~~~~v~~v~~~~~dg 267 (393)
T 4gq1_A 226 -----SQTELVKNP--------------------------------WLLTLNTLPL-VNTCHSSGIASSLANVRWIGSDG 267 (393)
T ss_dssp ----------CSCC--------------------------------CSEEEESGGG-C------CCSSSCSEEEEETTTT
T ss_pred -----cccCCcccc--------------------------------eEEecccccc-eeeeecccccccceeeeeecCCC
Confidence 111111000 0011111000 0000111234556777775 677
Q ss_pred CcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeC--------------------CCCEEEEEeCCC-EE
Q psy467 288 PMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE--------------------GGECLLGGDTEG-LK 346 (845)
Q Consensus 288 ~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSp--------------------dG~~Lasgs~DG-I~ 346 (845)
+ .+++++.|+.+++||+..+.....+..|...+..+.++| ++.++++|+.|+ |+
T Consensus 268 ~-----~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~ 342 (393)
T 4gq1_A 268 S-----GILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQ 342 (393)
T ss_dssp C-----EEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEE
T ss_pred C-----EEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEE
Confidence 7 899999999999999998877776666655444443332 344677888899 99
Q ss_pred EEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE----EEEEee
Q psy467 347 VYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR----VGTWSH 386 (845)
Q Consensus 347 IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS----VsiW~~ 386 (845)
|||+.+++++..+..|...|++++|+ ||++||++ +.+|.+
T Consensus 343 lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL 387 (393)
T 4gq1_A 343 LINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRL 387 (393)
T ss_dssp EEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEE
T ss_pred EEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 99999999988888899999999999 99999988 655643
No 119
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.5e-26 Score=279.60 Aligned_cols=256 Identities=19% Similarity=0.239 Sum_probs=207.8
Q ss_pred EEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC--CCcEEEEEcCCCCCeEEEEEccC--CCEEEEEECCCeEEE
Q psy467 51 IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA--VPTVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKL 126 (845)
Q Consensus 51 i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~--tg~~v~~l~~h~~~V~~lafspd--g~~Lasgs~DG~I~I 126 (845)
+..+.+|.+.|++++|+|++++|++|+.||.|++||+. +++.+..+.+|.+.|++++|+++ +++|++|+.||.|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 34678999999999999999999999999999999998 55777889999999999999988 899999999999999
Q ss_pred EECCCCc--eEEEEcCCCCCeEEEEEecC--CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCccee
Q psy467 127 WDLRRKG--CIYTYRGHSKSINSIRFSPD--GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVP 202 (845)
Q Consensus 127 WDl~t~~--~l~~~~~h~~~V~sLafSPd--g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs 202 (845)
||+.+++ .+..+..|...|.+++|+|+ ++++++|+.||.|++ ||+.++....
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~v-------------wdl~~~~~~~----------- 137 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV-------------VEFKENGTTS----------- 137 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE-------------EECCSSSCCC-----------
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEE-------------EEeecCCCcc-----------
Confidence 9999887 77788889999999999999 999999999999999 9998764411
Q ss_pred ecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEE
Q psy467 203 FSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLS 282 (845)
Q Consensus 203 ~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~sla 282 (845)
...+.+|... + .++.|+|... .......
T Consensus 138 -------~~~~~~~~~~-------v---------------------------~~l~~~p~~~-----------~~~~~~~ 165 (753)
T 3jro_A 138 -------PIIIDAHAIG-------V---------------------------NSASWAPATI-----------EEDGEHN 165 (753)
T ss_dssp -------CEEEECCSSC-------E---------------------------EEEEECCCC-------------------
T ss_pred -------eeEeecCCCc-------e---------------------------EEEEecCccc-----------ccccccc
Confidence 2334455554 5 6677776421 0000111
Q ss_pred EcCCCCcccceEEEEEeCCCeEEEEECCCC----eEEEEecCCCCCEEEEEEeCC---CCEEEEEeCCC-EEEEEecCCc
Q psy467 283 ILPQSPMLCFILTTSSSADRTVNFWDLEKF----SLVSTTEKNSSTIRRLTFSEG---GECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 283 fSPdg~~~~~~lLatgs~DG~I~IWDl~s~----~~l~tl~gh~~~VtslafSpd---G~~Lasgs~DG-I~IWDl~tgk 354 (845)
..+++. ++++|+.||.|++||++++ .+...+.+|...|++++|+|+ +++|++|+.|| |++||+.+++
T Consensus 166 ~~~d~~-----~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 166 GTKESR-----KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp -CGGGC-----CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred cCCCCC-----EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 133455 8999999999999999876 677788899999999999999 99999999999 9999999864
Q ss_pred -----eEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 355 -----QYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 355 -----~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
.+.....|.+.|++++|+ +|++++++ |.+|..+
T Consensus 241 ~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp SCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred CcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 333445688999999999 88888887 9999765
No 120
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=1.8e-24 Score=230.87 Aligned_cols=273 Identities=15% Similarity=0.249 Sum_probs=209.4
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEc--CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE
Q psy467 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLN--GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137 (845)
Q Consensus 60 ~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~--~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~ 137 (845)
..++|+||+++ +||+| .|++|+|||+.+++++..+. +|...|++++|+|++++|++|+.||.|++||+++++++..
T Consensus 27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred cceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 35789999875 77776 59999999999999888764 5778899999999999999999999999999999999999
Q ss_pred EcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCC---CCCCCCCcceeecCCCCeEEEEe
Q psy467 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLG---TPPPQYTSSVPFSHNTSLRKSFT 214 (845)
Q Consensus 138 ~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~---~~~~~~i~svs~spdg~~l~~~~ 214 (845)
+.+|...+.++.+. +..+++++.++.+.+ |+........ ..+...+..+.+.++++.+.+..
T Consensus 105 ~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 169 (318)
T 4ggc_A 105 MTSHSARVGSLSWN--SYILSSGSRSGHIHH-------------HDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG 169 (318)
T ss_dssp EECCSSCEEEEEEE--TTEEEEEETTSEEEE-------------EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred ecCccceEEEeecC--CCEEEEEecCCceEe-------------eecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEe
Confidence 99999888776554 789999999999999 8877654321 12245566777788887665532
Q ss_pred cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceE
Q psy467 215 KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFIL 294 (845)
Q Consensus 215 ~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~l 294 (845)
. ++.+.+|++...... .........+...+.+++++|++..+. .
T Consensus 170 ~------d~~i~iwd~~~~~~~----------------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~--~ 213 (318)
T 4ggc_A 170 N------DNLVNVWPSAPGEGG----------------------------WVPLQTFTQHQGAVKAVAWCPWQSNVL--A 213 (318)
T ss_dssp T------TSCEEEEESSCBTTB----------------------------SCCSEEECCCCSCEEEEEECTTSTTEE--E
T ss_pred c------CcceeEEECCCCccc----------------------------ccceeeecccCCceEEEEecCCCCcEE--E
Confidence 2 112334333211100 000011112345678888888876421 3
Q ss_pred EEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEe--CCC-EEEEEecCCceEEEecCCCCCeEEEEE
Q psy467 295 TTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGD--TEG-LKVYGWEPARQYDAQPMGWGKVQDLAV 371 (845)
Q Consensus 295 Latgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs--~DG-I~IWDl~tgk~l~tl~~h~~~VtsVaf 371 (845)
+++++.++.|++||........... +...+..++|++++..+++++ .|+ |+|||+.+++++.++.+|.+.|++++|
T Consensus 214 ~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~ 292 (318)
T 4ggc_A 214 TGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTM 292 (318)
T ss_dssp EEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 4567788999999999888776655 567899999999999988765 678 999999999999999999999999999
Q ss_pred c-CCceEEEE-----EEEEee
Q psy467 372 T-GTQLWFRR-----VGTWSH 386 (845)
Q Consensus 372 S-dg~lLaaS-----VsiW~~ 386 (845)
+ +|++|+++ |.+|.+
T Consensus 293 spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 293 SPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp CTTSSCEEEEETTTEEEEECC
T ss_pred cCCCCEEEEEecCCeEEEEEC
Confidence 9 89888877 999965
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=4.4e-24 Score=239.41 Aligned_cols=242 Identities=12% Similarity=0.051 Sum_probs=200.2
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLA 88 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~ 88 (845)
.+.+|.+.|.+++|++ ++.++++++.|+.|++||+.+++.+..+..|...+.+++|+|+++++++++ .++.|++||+.
T Consensus 164 ~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~ 242 (433)
T 3bws_A 164 KYKKKLGFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRK 242 (433)
T ss_dssp HHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cccccCCceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECC
Confidence 3558999999999998 899999999999999999999999999999999999999999999886554 79999999999
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCCCEEEEEE--------CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEE-EE
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGS--------LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWI-AS 159 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg~~Lasgs--------~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~L-as 159 (845)
+++.+..+..+ ..+.+++|+|+++++++++ .||.|++||+.+++.+..+. +...+.+++|+|+++.+ ++
T Consensus 243 ~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~ 320 (433)
T 3bws_A 243 TKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVS 320 (433)
T ss_dssp TTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEE
T ss_pred CCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEE
Confidence 99988888754 5599999999999999888 48899999999988777663 55688999999999755 56
Q ss_pred EeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccc
Q psy467 160 GGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQ 239 (845)
Q Consensus 160 gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~ 239 (845)
++.|+.+++ ||+.+++. +..+. +... +
T Consensus 321 ~~~~~~v~v-------------~d~~~~~~--------------------~~~~~-~~~~-------~------------ 347 (433)
T 3bws_A 321 DMCCSKIEV-------------YDLKEKKV--------------------QKSIP-VFDK-------P------------ 347 (433)
T ss_dssp ETTTTEEEE-------------EETTTTEE--------------------EEEEE-CSSS-------E------------
T ss_pred ecCCCEEEE-------------EECCCCcE--------------------EEEec-CCCC-------C------------
Confidence 688999999 99987766 33332 1111 2
Q ss_pred ccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC---------------CCeE
Q psy467 240 AGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA---------------DRTV 304 (845)
Q Consensus 240 ~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~---------------DG~I 304 (845)
..++|+|++. ++++++. ||.|
T Consensus 348 ---------------~~~~~s~dg~-----------------------------~l~~~~~~~~~~~~~~~~~g~~dg~v 383 (433)
T 3bws_A 348 ---------------NTIALSPDGK-----------------------------YLYVSCRGPNHPTEGYLKKGLVLGKV 383 (433)
T ss_dssp ---------------EEEEECTTSS-----------------------------EEEEEECCCCCTTTCTTSCCSSCCEE
T ss_pred ---------------CeEEEcCCCC-----------------------------EEEEEecCCCccccccccccccceEE
Confidence 4455555544 5555554 6799
Q ss_pred EEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeC-CC-EEEEEecC
Q psy467 305 NFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDT-EG-LKVYGWEP 352 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~-DG-I~IWDl~t 352 (845)
++||+.+++.+..+.. ...+.+++|+|+|++|++++. |+ |++|+++.
T Consensus 384 ~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 384 YVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 9999999999988886 457999999999999998875 88 99999864
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=2e-24 Score=236.60 Aligned_cols=249 Identities=12% Similarity=0.131 Sum_probs=178.6
Q ss_pred eeEEeccCCC----cEEEEEEecCCCC---EEEEEeCCCeEEEEECCCC---eeEEEecCCCC-----------------
Q psy467 7 KAEDFMAHGA----SVNCLALGKKSGQ---VLATGGDDKKVNLWALGKS---NCIMSLSGHST----------------- 59 (845)
Q Consensus 7 ~l~~L~gH~~----~V~~LafSp~dg~---~LaTgs~DG~I~IWdl~t~---~~i~~l~~h~~----------------- 59 (845)
-+.+|+.-.+ .+.++-|-. .+- .++++++ ..|++|+..++ +.++++..|..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 104 (356)
T 2w18_A 27 LVSELKNPSGSCSVDVSAMFWER-AGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCV 104 (356)
T ss_dssp EEEEECCCCSSCEEEEEEEEEC-----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEE
T ss_pred eeehhcCCCCCeEEEEeeeeecc-CCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeee
Confidence 3455665444 356666644 333 5667775 48999999888 88888887765
Q ss_pred --------CeEEEEEcCC----CCEEEEEEC--------------------CCcEEEEEC-CCCcEEEEEcCCCCCeEEE
Q psy467 60 --------PVESVQFGNG----EETLSAGCQ--------------------SGSIKIWNL-AVPTVQRTLNGHKSSITSV 106 (845)
Q Consensus 60 --------~V~sLafSpd----g~~LaSgs~--------------------DGtV~VWDl-~tg~~v~~l~~h~~~V~~l 106 (845)
.|+.++|+|+ ++++++++. |+.|++|++ .+++.+..+..|...+..+
T Consensus 105 ~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l 184 (356)
T 2w18_A 105 ALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETIL 184 (356)
T ss_dssp EECSSSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEE
T ss_pred eeccccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeE
Confidence 4556667778 777777653 788888888 4477777777888888888
Q ss_pred EEcc---CCCEEEEEECCCeEEEEECCCCceEEEEcCCC---CCeEEEEEecCCCEE------------EEEeCCCcEEE
Q psy467 107 DFHP---YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS---KSINSIRFSPDGQWI------------ASGGEDGVVRI 168 (845)
Q Consensus 107 afsp---dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~---~~V~sLafSPdg~~L------------asgs~DG~I~I 168 (845)
+|++ ++.+|++++.|++|++||+.++++++++.+|. ..+.+++|+|+|.++ ++|+.|+++++
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 8888 67899999999999999999999999998654 367788999999987 45667777777
Q ss_pred eeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
||..+++. +..+.
T Consensus 265 -------------Wd~~tgk~--------------------l~v~~---------------------------------- 277 (356)
T 2w18_A 265 -------------INPKTTLS--------------------VGVML---------------------------------- 277 (356)
T ss_dssp -------------EETTTTEE--------------------EEEEE----------------------------------
T ss_pred -------------EECCCCEE--------------------EEEEE----------------------------------
Confidence 99988876 32211
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEE-E
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR-R 327 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vt-s 327 (845)
+.+ |++.. ....+..++ +. ++++|+.|++|+|||+.+++++.++.+|...+. +
T Consensus 278 --------~~~-p~Gh~----------~~~lsg~~s--g~-----~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~ 331 (356)
T 2w18_A 278 --------YCL-PPGQA----------GRFLEGDVK--DH-----CAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSF 331 (356)
T ss_dssp --------ECC-CTTCC----------CCEEEEEEE--TT-----EEEEEETTSCEEEEETTTCSEEEEECCC--CCCCE
T ss_pred --------eec-cCCCc----------ceeEccccC--CC-----EEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEE
Confidence 000 11110 000011111 33 899999999999999999999999999877655 6
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl 350 (845)
++|||||++|++|+.|+ |+|||+
T Consensus 332 vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 332 VKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEECCCCCEEEEEECCCcEEEecC
Confidence 89999999999999999 999996
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.5e-24 Score=237.46 Aligned_cols=248 Identities=11% Similarity=0.068 Sum_probs=188.5
Q ss_pred cceeeeeE------EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC---------CCeeEEEec-CCCCCeEEEE
Q psy467 2 RAKVEKAE------DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALG---------KSNCIMSLS-GHSTPVESVQ 65 (845)
Q Consensus 2 ~irlw~l~------~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~---------t~~~i~~l~-~h~~~V~sLa 65 (845)
++++|++. .+. ...|.++.|+| + +++++.|++|++|+.. +++.+..+. +|...|.+++
T Consensus 59 ~v~iwd~~~~~~~~~~~--~~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 132 (343)
T 3lrv_A 59 ALHFTQLKDSKTITTIT--TPNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMY 132 (343)
T ss_dssp EEEEEEESSSSCEEEEE--EECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEE
T ss_pred cEEEEECCCCcEEEEEe--cCCceeeeeCC-c---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEE
Confidence 35677753 232 46788889988 4 9999999999999765 455454443 6778999999
Q ss_pred EcC--CCCEEEEEECCCcEEEEECCCCcEEEEEc-CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceE-EEEcC-
Q psy467 66 FGN--GEETLSAGCQSGSIKIWNLAVPTVQRTLN-GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI-YTYRG- 140 (845)
Q Consensus 66 fSp--dg~~LaSgs~DGtV~VWDl~tg~~v~~l~-~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l-~~~~~- 140 (845)
|+| ++++|++++.||+|++||+++++...... .+...|.+++|+|++.+|++|+.||.|++||+++++.+ ..+..
T Consensus 133 ~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~ 212 (343)
T 3lrv_A 133 GHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVD 212 (343)
T ss_dssp CCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCC
T ss_pred cCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEecc
Confidence 999 99999999999999999999999877664 45568999999999999999999999999999999887 78888
Q ss_pred CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCC
Q psy467 141 HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 141 h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~ 220 (845)
|...|.+++|+|++.+|++++. +.|++ ||+++++....+. .+..+...
T Consensus 213 h~~~v~~l~fs~~g~~l~s~~~-~~v~i-------------wd~~~~~~~~~~~-----------------~~~~~~~~- 260 (343)
T 3lrv_A 213 EEAKIKEVKFADNGYWMVVECD-QTVVC-------------FDLRKDVGTLAYP-----------------TYTIPEFK- 260 (343)
T ss_dssp TTSCEEEEEECTTSSEEEEEES-SBEEE-------------EETTSSTTCBSSC-----------------CCBC-----
T ss_pred CCCCEEEEEEeCCCCEEEEEeC-CeEEE-------------EEcCCCCcceeec-----------------cccccccc-
Confidence 9999999999999999999994 59999 9999876621100 00001010
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA 300 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~ 300 (845)
+ .. .+++|+|+|+ +|++++.
T Consensus 261 ------~---------------------------~~----------------------~~~~~~~~g~-----~l~~~s~ 280 (343)
T 3lrv_A 261 ------T---------------------------GT----------------------VTYDIDDSGK-----NMIAYSN 280 (343)
T ss_dssp ----------------------------------CC----------------------EEEEECTTSS-----EEEEEET
T ss_pred ------c---------------------------cc----------------------eEEEECCCCC-----EEEEecC
Confidence 1 00 2344555554 8999888
Q ss_pred -CCeEEEEECCCCeEEEEecCCCCCEEEEEEeC---CCCEEEEEeCCC-EEEEEec
Q psy467 301 -DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE---GGECLLGGDTEG-LKVYGWE 351 (845)
Q Consensus 301 -DG~I~IWDl~s~~~l~tl~gh~~~VtslafSp---dG~~Lasgs~DG-I~IWDl~ 351 (845)
|+.|++|++.+....... .++..++|++ +++.|++++.|+ +.++-..
T Consensus 281 ~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 281 ESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp TTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred CCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 999999998665432222 4678888988 888999999999 7776543
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=9.5e-24 Score=238.92 Aligned_cols=268 Identities=13% Similarity=0.085 Sum_probs=206.6
Q ss_pred cceeeee----------EEeccCCCcEEEEEEecC-------------CCCEEEEEeCC------CeEEEEECCCCeeEE
Q psy467 2 RAKVEKA----------EDFMAHGASVNCLALGKK-------------SGQVLATGGDD------KKVNLWALGKSNCIM 52 (845)
Q Consensus 2 ~irlw~l----------~~L~gH~~~V~~LafSp~-------------dg~~LaTgs~D------G~I~IWdl~t~~~i~ 52 (845)
++++|++ +.+.+|...+.++++++. .+..++.++.+ +.|++||+.. ....
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~ 172 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQF 172 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCE
T ss_pred EEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCE
Confidence 4678877 457889888888887641 15667766654 7999999974 5567
Q ss_pred EecCCCCCeEEEEEcCCCCEEEEEECCC---cEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEE-EEECCC--eEEE
Q psy467 53 SLSGHSTPVESVQFGNGEETLSAGCQSG---SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC-SGSLDS--FIKL 126 (845)
Q Consensus 53 ~l~~h~~~V~sLafSpdg~~LaSgs~DG---tV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~La-sgs~DG--~I~I 126 (845)
.+.+|...|.+++|+|+|++|++++.++ .|++||+.+++.. .+..|...+.+++|+|||++|+ +++.++ .|++
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~ 251 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYV 251 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEE
Confidence 7788999999999999999999999875 9999999998875 4556888899999999999887 666655 4999
Q ss_pred EECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-CC--cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceee
Q psy467 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE-DG--VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPF 203 (845)
Q Consensus 127 WDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~-DG--~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~ 203 (845)
||+.+++. ..+..|...+.+++|+|||++|++++. ++ .|.+ ||+.+++.
T Consensus 252 ~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~-------------~d~~~~~~-------------- 303 (415)
T 2hqs_A 252 MDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK-------------VNINGGAP-------------- 303 (415)
T ss_dssp EETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE-------------EETTSSCC--------------
T ss_pred EECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE-------------EECCCCCE--------------
Confidence 99988765 567778888999999999999988876 45 4555 78876654
Q ss_pred cCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEE
Q psy467 204 SHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSI 283 (845)
Q Consensus 204 spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slaf 283 (845)
. .+..+... + ..++|+|++.
T Consensus 304 ------~-~l~~~~~~-------~---------------------------~~~~~spdG~------------------- 323 (415)
T 2hqs_A 304 ------Q-RITWEGSQ-------N---------------------------QDADVSSDGK------------------- 323 (415)
T ss_dssp ------E-ECCCSSSE-------E---------------------------EEEEECTTSS-------------------
T ss_pred ------E-EEecCCCc-------c---------------------------cCeEECCCCC-------------------
Confidence 1 11111111 2 3445555555
Q ss_pred cCCCCcccceEEEEEeCC---CeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC----EEEEEecCCceE
Q psy467 284 LPQSPMLCFILTTSSSAD---RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG----LKVYGWEPARQY 356 (845)
Q Consensus 284 SPdg~~~~~~lLatgs~D---G~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG----I~IWDl~tgk~l 356 (845)
+|++++.+ ..|++||+.+++.. .+..+. .+.+++|+|||++|++++.++ |++||+. ++..
T Consensus 324 ----------~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~ 390 (415)
T 2hqs_A 324 ----------FMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFK 390 (415)
T ss_dssp ----------EEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCE
T ss_pred ----------EEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcE
Confidence 77777654 58999999988774 455554 899999999999998887654 8888876 5667
Q ss_pred EEecCCCCCeEEEEEc
Q psy467 357 DAQPMGWGKVQDLAVT 372 (845)
Q Consensus 357 ~tl~~h~~~VtsVafS 372 (845)
..+..|.+.|++++|+
T Consensus 391 ~~l~~~~~~v~~~~~~ 406 (415)
T 2hqs_A 391 ARLPATDGQVKFPAWS 406 (415)
T ss_dssp EECCCSSSEEEEEEEC
T ss_pred EEeeCCCCCCcCCccc
Confidence 8889999999999999
No 125
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.7e-24 Score=248.18 Aligned_cols=244 Identities=10% Similarity=0.112 Sum_probs=181.9
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCC-----CeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHST-----PVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~-----~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
+|...|.+++||| +|++||+++.||.|+||+.+. ++..+. |.. .|.+++|||||++||+|+.||+|++||+
T Consensus 83 ~~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 83 QPVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp SCSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred CCCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 6788999999999 999999999999999999654 666677 665 5999999999999999999999999999
Q ss_pred CCCc-------EEEEE----cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce---EEEE-cCCCCCeEEEEEec
Q psy467 88 AVPT-------VQRTL----NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC---IYTY-RGHSKSINSIRFSP 152 (845)
Q Consensus 88 ~tg~-------~v~~l----~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~---l~~~-~~h~~~V~sLafSP 152 (845)
.++. .+.++ .+|...|.+++|+||| +++++.|+.|++||+.++.. ..++ .+|...|.+++|+
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs- 235 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV- 235 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-
Confidence 9885 36776 6778899999999999 88999999999999987763 3566 4788899999999
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc-CCC-CCCCCCcceee--cCCCCeEEEEecCCCCCccceeeEe
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP-LGT-PPPQYTSSVPF--SHNTSLRKSFTKGRPGGTKAKIDVT 228 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~-l~~-~~~~~i~svs~--spdg~~l~~~~~h~~~~~~~~i~V~ 228 (845)
|+.||+++ ++.|++ ||+.+++. ... -+...+.+++| +|++..+... ...+ . .+|
T Consensus 236 -g~~LASa~-~~tIkL-------------Wd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a--~edG----~-klw 293 (588)
T 2j04_A 236 -DYKVVLTC-PGYVHK-------------IDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMS--NKTS----Y-KVL 293 (588)
T ss_dssp -TTEEEEEC-SSEEEE-------------EETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEEC--SSCE----E-EEE
T ss_pred -CCEEEEEe-CCeEEE-------------EECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEE--cCCC----C-EEE
Confidence 68899887 699999 99987766 111 12344445555 5555333221 1000 0 011
Q ss_pred eecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEE
Q psy467 229 RIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWD 308 (845)
Q Consensus 229 ~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWD 308 (845)
.. + .++++||+. ++++. |+++++|+
T Consensus 294 ~~-------------------------------d-----------------~~~~spd~~-----l~a~~--d~~v~lW~ 318 (588)
T 2j04_A 294 LE-------------------------------D-----------------ELHVTADNI-----IAPYL--EKKFKKWS 318 (588)
T ss_dssp ES-------------------------------S-----------------SEEEECCCS-----SHHHH--HHHHHHTT
T ss_pred ee-------------------------------c-----------------cEEECCCce-----EEEEc--CCEEEEEE
Confidence 00 0 234555555 44443 78888887
Q ss_pred CCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeC
Q psy467 309 LEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDT 342 (845)
Q Consensus 309 l~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~ 342 (845)
...+. +..+.+ ...|.+++|||||+.+|+++.
T Consensus 319 ~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 319 TIWNE-FNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp TTTTS-SSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred CCCCc-eeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 65443 333333 556999999999999998864
No 126
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.92 E-value=2.3e-23 Score=230.27 Aligned_cols=240 Identities=11% Similarity=0.117 Sum_probs=179.9
Q ss_pred EEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEE-EEEEC
Q psy467 42 LWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSL 120 (845)
Q Consensus 42 IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~L-asgs~ 120 (845)
||++.+...+.....|...|.+++|+|||++|++|+.++ +++|++.+++....... ..+..+++.++++.+ ++++.
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 79 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGV 79 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECC
Confidence 566667777777889999999999999999999997665 78999998776655442 247888999988877 56778
Q ss_pred CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCC-ccCCCCCCCCCc
Q psy467 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLV-HPLGTPPPQYTS 199 (845)
Q Consensus 121 DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg-~~l~~~~~~~i~ 199 (845)
|+.|++||+.+++++..+. +...|.+++|+++. ++++ .|+.|++ ||+.++ +.+..
T Consensus 80 d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i-------------~d~~~~~~~~~~------- 135 (355)
T 3vu4_A 80 KEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISV-------------FKFGNPWKRITD------- 135 (355)
T ss_dssp TTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEE-------------EESSTTCCBSSC-------
T ss_pred ccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEE-------------EECCCCceeeEE-------
Confidence 8999999999999999887 66789999999764 4444 4778999 999877 44211
Q ss_pred ceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCce
Q psy467 200 SVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRT 279 (845)
Q Consensus 200 svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~ 279 (845)
+.. . . ..+++++ .
T Consensus 136 -------------~~~---~-------~---------------------------~~~~~s~--~--------------- 148 (355)
T 3vu4_A 136 -------------DIR---F-------G---------------------------GVCEFSN--G--------------- 148 (355)
T ss_dssp -------------CEE---E-------E---------------------------EEEEEET--T---------------
T ss_pred -------------ecc---C-------C---------------------------ceEEEEc--c---------------
Confidence 111 0 1 2233444 2
Q ss_pred eEEEcCCCCcccceEEEE--EeCCCeEEEEECCCCe----------------EEEEecCCCCCEEEEEEeCCCCEEEEEe
Q psy467 280 SLSILPQSPMLCFILTTS--SSADRTVNFWDLEKFS----------------LVSTTEKNSSTIRRLTFSEGGECLLGGD 341 (845)
Q Consensus 280 slafSPdg~~~~~~lLat--gs~DG~I~IWDl~s~~----------------~l~tl~gh~~~VtslafSpdG~~Lasgs 341 (845)
++++ |+.||.|++||+.++. ++..+.+|.+.|++++|+|+|++||+|+
T Consensus 149 --------------~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s 214 (355)
T 3vu4_A 149 --------------LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCS 214 (355)
T ss_dssp --------------EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred --------------EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEe
Confidence 4554 6889999999999865 2678899999999999999999999999
Q ss_pred CCC--EEEEEecCCceEEEec-C-CCCCeEEEEEc-CCceEEEE-----EEEEeeCCC
Q psy467 342 TEG--LKVYGWEPARQYDAQP-M-GWGKVQDLAVT-GTQLWFRR-----VGTWSHQDS 389 (845)
Q Consensus 342 ~DG--I~IWDl~tgk~l~tl~-~-h~~~VtsVafS-dg~lLaaS-----VsiW~~d~~ 389 (845)
.|+ |+|||+.+++++..+. + |...|++++|+ ++++|+++ |.+|.+...
T Consensus 215 ~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 215 QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 998 9999999999999998 5 99999999999 89988887 999987544
No 127
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=3.5e-22 Score=240.69 Aligned_cols=326 Identities=12% Similarity=0.127 Sum_probs=227.2
Q ss_pred CCcEEEEEEecCCCCEEEEEeC-CC-----eEEEEECCCCeeEEEecCCCC------------------------CeEEE
Q psy467 15 GASVNCLALGKKSGQVLATGGD-DK-----KVNLWALGKSNCIMSLSGHST------------------------PVESV 64 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~-DG-----~I~IWdl~t~~~i~~l~~h~~------------------------~V~sL 64 (845)
...|.+++||| +|++|++++. |+ .|++||+.+++....+..+.. .|.++
T Consensus 36 ~~~~~~~~~Sp-dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAP-DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECT-TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEec-CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 45799999999 9999999998 88 899999999988777765433 38899
Q ss_pred EEcCCCCEEEEEECCCcEEEEECCCCc--EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCC
Q psy467 65 QFGNGEETLSAGCQSGSIKIWNLAVPT--VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS 142 (845)
Q Consensus 65 afSpdg~~LaSgs~DGtV~VWDl~tg~--~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~ 142 (845)
+|||||++|++++. +.|.+||+.++. ....+..|...+.+++|+|||++|++++ ++.|++||+.+++.......+.
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCc
Confidence 99999999999986 999999999872 3455666788899999999999999887 4689999999877665444333
Q ss_pred CC----------------eEEEEEecCCCEEEEEeCCCc-EEEe--------------eeecc-----CCceeEEEECCC
Q psy467 143 KS----------------INSIRFSPDGQWIASGGEDGV-VRIG--------------ASFHL-----TNTSIHVVDLSL 186 (845)
Q Consensus 143 ~~----------------V~sLafSPdg~~Lasgs~DG~-I~I~--------------~~~~~-----~~~~I~vWDl~t 186 (845)
.. +.+++|+|||++|++++.|+. +..+ ..|.. ....+++||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 32 477999999999999876651 0000 00100 111566699987
Q ss_pred -CccCCCC----CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcC
Q psy467 187 -VHPLGTP----PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQP 261 (845)
Q Consensus 187 -g~~l~~~----~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fsp 261 (845)
++..... ....+..++| |||+.+......... ....+.++++..... ..+.-..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~-~~~~i~~~d~~~g~~-------------------~~~~~~~ 331 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQ-KKLDLVEVTLASNQQ-------------------RVLAHET 331 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTS-SEEEEEEEETTTCCE-------------------EEEEEEE
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccC-CeEEEEEEECCCCce-------------------EEEEEcC
Confidence 7653222 2345678999 999988765432211 112222222111000 0000000
Q ss_pred CCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC-CCeEEEEecCCCCCEEEE-EEeCCCCEEEE
Q psy467 262 HRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE-KFSLVSTTEKNSSTIRRL-TFSEGGECLLG 339 (845)
Q Consensus 262 dg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~-s~~~l~tl~gh~~~Vtsl-afSpdG~~Las 339 (845)
... ....+..++|+|||+ ++++++.||.++||.+. ++. ...+..|...|..+ .|+|+|+.|+.
T Consensus 332 ~~~---------~~~~~~~~~~spdg~-----~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~ 396 (741)
T 2ecf_A 332 SPT---------WVPLHNSLRFLDDGS-----ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYF 396 (741)
T ss_dssp CSS---------CCCCCSCCEECTTSC-----EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEE
T ss_pred CCC---------cCCcCCceEECCCCe-----EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEE
Confidence 000 001345788999998 88999999987777665 345 77788888888887 59999997754
Q ss_pred -EeCCC---EEEEEecC-CceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 340 -GDTEG---LKVYGWEP-ARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 340 -gs~DG---I~IWDl~t-gk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
++.++ ++||++.. +.....+.. ...+.+++|+ ||+.|+..
T Consensus 397 ~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~ 442 (741)
T 2ecf_A 397 RAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDS 442 (741)
T ss_dssp EECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEE
T ss_pred EEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEE
Confidence 44443 89999985 555666665 6678999999 99988876
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=1.2e-21 Score=229.89 Aligned_cols=305 Identities=11% Similarity=0.064 Sum_probs=230.8
Q ss_pred EEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC--CCCcEEEEEcCC
Q psy467 22 ALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL--AVPTVQRTLNGH 99 (845)
Q Consensus 22 afSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl--~tg~~v~~l~~h 99 (845)
+|+| ++.++++++.|++|.+||..+++++.++..+.. +.+++|+|||++|++++.|++|.+||+ .+++.+.++. +
T Consensus 144 ~~~p-~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~ 220 (543)
T 1nir_A 144 DLDL-PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-I 220 (543)
T ss_dssp CCCG-GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-C
T ss_pred ccCC-CCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-c
Confidence 4888 888999999999999999999999999984333 899999999999999999999999999 8899888888 4
Q ss_pred CCCeEEEEEcc----CCCEEEEEE-CCCeEEEEECCCCceEEEEcCC-----------CCCeEEEEEecCCCE-EEEEeC
Q psy467 100 KSSITSVDFHP----YGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGH-----------SKSINSIRFSPDGQW-IASGGE 162 (845)
Q Consensus 100 ~~~V~~lafsp----dg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h-----------~~~V~sLafSPdg~~-Lasgs~ 162 (845)
...+..++|+| ||+++++++ .+++|.+||..+++++..+..+ ...+.++.++|++.. +++...
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 55689999999 999999888 4899999999999998887642 236889999997765 556667
Q ss_pred CCcEEEeeeeccCCceeEEEECCCCccCC--CC-CCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccc
Q psy467 163 DGVVRIGASFHLTNTSIHVVDLSLVHPLG--TP-PPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQ 239 (845)
Q Consensus 163 DG~I~I~~~~~~~~~~I~vWDl~tg~~l~--~~-~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~ 239 (845)
++.|.+ ||..+.+.+. .. .......+.|+|+|+++......... +.+++.....
T Consensus 301 ~g~i~v-------------vd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~-----v~v~D~~tg~----- 357 (543)
T 1nir_A 301 TGKVLL-------------VNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNK-----VAVIDSKDRR----- 357 (543)
T ss_dssp TTEEEE-------------EECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTE-----EEEEETTTTE-----
T ss_pred CCeEEE-------------EEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCe-----EEEEECCCCe-----
Confidence 899999 9988765432 11 24567789999999977554332222 2232222110
Q ss_pred ccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECCC-------
Q psy467 240 AGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLEK------- 311 (845)
Q Consensus 240 ~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~s------- 311 (845)
.+..-+-+. .++......+ ++|++.. +++++. .|++|.+||+.+
T Consensus 358 ----------------l~~~i~~g~-------~ph~g~g~~~-~~p~~g~----~~~s~~~~d~~V~v~d~~~~~~~~~~ 409 (543)
T 1nir_A 358 ----------------LSALVDVGK-------TPHPGRGANF-VHPKYGP----VWSTSHLGDGSISLIGTDPKNHPQYA 409 (543)
T ss_dssp ----------------EEEEEECSS-------SBCCTTCEEE-EETTTEE----EEEEEBSSSSEEEEEECCTTTCTTTB
T ss_pred ----------------EEEeeccCC-------CCCCCCCccc-CCCCCcc----EEEeccCCCceEEEEEeCCCCCchhc
Confidence 111111111 1111111122 4666331 677775 689999999998
Q ss_pred CeEEEEecCCCCCEEEEEEeCCCCEEEEEe-------CCC-EEEEEecCCceE-EEe--------cCCCCCeEEEEEc-C
Q psy467 312 FSLVSTTEKNSSTIRRLTFSEGGECLLGGD-------TEG-LKVYGWEPARQY-DAQ--------PMGWGKVQDLAVT-G 373 (845)
Q Consensus 312 ~~~l~tl~gh~~~VtslafSpdG~~Lasgs-------~DG-I~IWDl~tgk~l-~tl--------~~h~~~VtsVafS-d 373 (845)
+++++++.+|.+.+..++|+|+|++|++++ .++ |.|||+.+++.. ..+ ..+...+..++|+ +
T Consensus 410 ~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 489 (543)
T 1nir_A 410 WKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKR 489 (543)
T ss_dssp TSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSS
T ss_pred CeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCC
Confidence 899999999988899999999999999987 144 999999998876 544 3567789999999 9
Q ss_pred CceEEEE
Q psy467 374 TQLWFRR 380 (845)
Q Consensus 374 g~lLaaS 380 (845)
|+.+.++
T Consensus 490 g~~~~~s 496 (543)
T 1nir_A 490 GDEVWFS 496 (543)
T ss_dssp SSEEEEE
T ss_pred CCEEEEE
Confidence 9998865
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=1.7e-22 Score=228.54 Aligned_cols=264 Identities=12% Similarity=0.087 Sum_probs=201.9
Q ss_pred CCcEEEEEEecCCCCEEEEEe----CCC----eEEEEEC--CCCeeE--EEecCCCCCeEEEEEcC--------------
Q psy467 15 GASVNCLALGKKSGQVLATGG----DDK----KVNLWAL--GKSNCI--MSLSGHSTPVESVQFGN-------------- 68 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs----~DG----~I~IWdl--~t~~~i--~~l~~h~~~V~sLafSp-------------- 68 (845)
...|...+|++.+.+++++|+ .+| .|+|||+ .+++.+ ..+.+|...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 346778888885567887886 567 8999999 888877 55888888888887764
Q ss_pred CCCEEEEEECC------CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC---eEEEEECCCCceEEEEc
Q psy467 69 GEETLSAGCQS------GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS---FIKLWDLRRKGCIYTYR 139 (845)
Q Consensus 69 dg~~LaSgs~D------GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG---~I~IWDl~t~~~l~~~~ 139 (845)
.+..++.++.+ +.|++||++. .....+..|...+.+++|+|||++|++++.++ .|++||+.+++.. .+.
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~ 219 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVA 219 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEE
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eee
Confidence 25667666654 7999999985 44566777889999999999999999999875 9999999988775 456
Q ss_pred CCCCCeEEEEEecCCCEEE-EEeCCCc--EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecC
Q psy467 140 GHSKSINSIRFSPDGQWIA-SGGEDGV--VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKG 216 (845)
Q Consensus 140 ~h~~~V~sLafSPdg~~La-sgs~DG~--I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h 216 (845)
.+...+.+++|+|||++|+ +++.++. |++ ||+.+++. ..+..+
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~-------------~d~~~~~~---------------------~~l~~~ 265 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYV-------------MDLASGQI---------------------RQVTDG 265 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEE-------------EETTTCCE---------------------EECCCC
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEE-------------EECCCCCE---------------------EeCcCC
Confidence 6788899999999999888 5666655 666 99887654 222222
Q ss_pred CCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE
Q psy467 217 RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT 296 (845)
Q Consensus 217 ~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa 296 (845)
... + ..+.|+|++. .|+
T Consensus 266 ~~~-------~---------------------------~~~~~spdg~-----------------------------~l~ 282 (415)
T 2hqs_A 266 RSN-------N---------------------------TEPTWFPDSQ-----------------------------NLA 282 (415)
T ss_dssp SSC-------E---------------------------EEEEECTTSS-----------------------------EEE
T ss_pred CCc-------c---------------------------cceEECCCCC-----------------------------EEE
Confidence 222 2 4455555555 777
Q ss_pred EEeC-CC--eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCC---C-EEEEEecCCceEEEecCCCCCeEEE
Q psy467 297 SSSA-DR--TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE---G-LKVYGWEPARQYDAQPMGWGKVQDL 369 (845)
Q Consensus 297 tgs~-DG--~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~D---G-I~IWDl~tgk~l~tl~~h~~~VtsV 369 (845)
+++. ++ .|++||+.+++. ..+..+...+.+++|+|||++|++++.+ . |++||+.+++.. .+..+. .+.++
T Consensus 283 ~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~ 359 (415)
T 2hqs_A 283 FTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETP 359 (415)
T ss_dssp EEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEE
T ss_pred EEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCe
Confidence 7775 44 788889988764 3455567789999999999999988764 3 999999998764 455554 89999
Q ss_pred EEc-CCceEEEE
Q psy467 370 AVT-GTQLWFRR 380 (845)
Q Consensus 370 afS-dg~lLaaS 380 (845)
+|+ +|++|+.+
T Consensus 360 ~~spdg~~l~~~ 371 (415)
T 2hqs_A 360 SLAPNGTMVIYS 371 (415)
T ss_dssp EECTTSSEEEEE
T ss_pred EEcCCCCEEEEE
Confidence 999 89887766
No 130
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=8e-21 Score=205.94 Aligned_cols=270 Identities=10% Similarity=0.017 Sum_probs=210.1
Q ss_pred CCCcEEEEEEecCCCCEEEEEeC-------CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEE
Q psy467 14 HGASVNCLALGKKSGQVLATGGD-------DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIW 85 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~-------DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VW 85 (845)
....+..++|+| +++++++++. ++.|.+||..+++.+..+.. ...+..++|+|+++++++++ .++.|.+|
T Consensus 39 ~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 39 VGKGAYEMAYSQ-QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp EESSEEEEEEET-TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred hccCccceEECC-CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 345788999999 8888887764 56899999999998888764 34578899999999665554 47999999
Q ss_pred ECCCCcEEEEEcCCCCC---------eEEEEEccCCCEEEEEE--CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCC
Q psy467 86 NLAVPTVQRTLNGHKSS---------ITSVDFHPYGDYLCSGS--LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~---------V~~lafspdg~~Lasgs--~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg 154 (845)
|..+++.+..+..+... +.+++|+|+++++++++ .++.|.+||..+++.+..+..+...+.+++|+|+|
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 99999988888754422 68899999999887776 47899999999999988887566668899999999
Q ss_pred CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
+++++++.++.+.+ ||..+++. +..+......
T Consensus 197 ~~l~~~~~~~~i~~-------------~d~~~~~~--------------------~~~~~~~~~~--------------- 228 (353)
T 3vgz_A 197 KRLYTTNADGELIT-------------IDTADNKI--------------------LSRKKLLDDG--------------- 228 (353)
T ss_dssp TEEEEECTTSEEEE-------------EETTTTEE--------------------EEEEECCCSS---------------
T ss_pred CEEEEEcCCCeEEE-------------EECCCCeE--------------------EEEEEcCCCC---------------
Confidence 99999999999999 99988776 3333221110
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECCCCe
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLEKFS 313 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~s~~ 313 (845)
. ...+..++|+|+++ .+++++ .++.|.+||+.+++
T Consensus 229 -----------------------------~----------~~~~~~~~~s~dg~-----~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 229 -----------------------------K----------EHFFINISLDTARQ-----RAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp -----------------------------S----------CCCEEEEEEETTTT-----EEEEEESSSSEEEEEETTTCC
T ss_pred -----------------------------C----------CcccceEEECCCCC-----EEEEEeCCCCEEEEEECCCCc
Confidence 0 01223445555554 555554 55999999999999
Q ss_pred EEEEecCCCCCEEEEEEeCCCCEEEEEe-CCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 314 LVSTTEKNSSTIRRLTFSEGGECLLGGD-TEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 314 ~l~tl~gh~~~VtslafSpdG~~Lasgs-~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
.+..+.... ..+++|+|+|+++++++ .++ |.+||..+++.+..+..+ ..+.+++|+ +|++|+++
T Consensus 265 ~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~ 331 (353)
T 3vgz_A 265 ILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVS 331 (353)
T ss_dssp EEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEE
T ss_pred EEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEE
Confidence 888887543 26799999999777666 466 999999999988887654 478999999 99977766
No 131
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.89 E-value=8e-22 Score=216.09 Aligned_cols=195 Identities=14% Similarity=0.103 Sum_probs=151.5
Q ss_pred cEEEEEEecCC----CCEEEEEeC--------------------CCeEEEEEC-CCCeeEEEecCCCCCeEEEEEcC---
Q psy467 17 SVNCLALGKKS----GQVLATGGD--------------------DKKVNLWAL-GKSNCIMSLSGHSTPVESVQFGN--- 68 (845)
Q Consensus 17 ~V~~LafSp~d----g~~LaTgs~--------------------DG~I~IWdl-~t~~~i~~l~~h~~~V~sLafSp--- 68 (845)
.|++++|+| + ++++++++. |+.|++|++ .+++.+..+..|...+..++|++
T Consensus 113 ~v~sla~sp-d~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g 191 (356)
T 2w18_A 113 EIRALFCSS-DDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQG 191 (356)
T ss_dssp EEEEECC-------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEET
T ss_pred ceEEEEECC-CccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCC
Confidence 456666666 6 677777553 788888888 55777777888888888888888
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEEEEcCCC---CCeEEEEEccCCCEE------------EEEECCCeEEEEECCCCc
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK---SSITSVDFHPYGDYL------------CSGSLDSFIKLWDLRRKG 133 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~---~~V~~lafspdg~~L------------asgs~DG~I~IWDl~t~~ 133 (845)
++.+|++|+.|++|+|||+.++++++++.+|. ..+.+++|+|+|.++ ++|+.|++|++||..+++
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 77899999999999999999999999998654 367788999999876 567889999999999998
Q ss_pred eEEEE-----cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC
Q psy467 134 CIYTY-----RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS 208 (845)
Q Consensus 134 ~l~~~-----~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~ 208 (845)
.+..+ .+|...+.+..++ +.++++++.|++|++ ||+.+++.
T Consensus 272 ~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkI-------------WDl~tGk~------------------- 317 (356)
T 2w18_A 272 SVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAI-------------WDLLLGQC------------------- 317 (356)
T ss_dssp EEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEE-------------EETTTCSE-------------------
T ss_pred EEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEE-------------EECCCCcE-------------------
Confidence 87765 3566655555554 889999999999999 99999998
Q ss_pred eEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCC
Q psy467 209 LRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSP 288 (845)
Q Consensus 209 ~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~ 288 (845)
+.++.+|... + ...++|+|+++
T Consensus 318 -l~tL~gH~~~-------v--------------------------vs~vafSPDG~------------------------ 339 (356)
T 2w18_A 318 -TALLPPVSDQ-------H--------------------------WSFVKWSGTDS------------------------ 339 (356)
T ss_dssp -EEEECCC--C-------C--------------------------CCEEEECSSSS------------------------
T ss_pred -EEEecCCCCC-------e--------------------------EEEEEECCCCC------------------------
Confidence 7887777654 3 02356666666
Q ss_pred cccceEEEEEeCCCeEEEEEC
Q psy467 289 MLCFILTTSSSADRTVNFWDL 309 (845)
Q Consensus 289 ~~~~~lLatgs~DG~I~IWDl 309 (845)
+|++|+.|++|+|||+
T Consensus 340 -----~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 340 -----HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -----EEEEECTTSCEEEEEE
T ss_pred -----EEEEEECCCcEEEecC
Confidence 9999999999999995
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=8.7e-21 Score=204.64 Aligned_cols=283 Identities=8% Similarity=0.043 Sum_probs=204.1
Q ss_pred EEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC-CCcEEEEECCCCcE-EEEEcC
Q psy467 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ-SGSIKIWNLAVPTV-QRTLNG 98 (845)
Q Consensus 21 LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~-DGtV~VWDl~tg~~-v~~l~~ 98 (845)
..|.++.+..+++++.++.|.+||..+++....+..+...+ +++|+|+++++++++. ++.|.+||+.+++. ...+..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 34555345567788889999999999999988887777777 9999999997777666 88999999999987 777776
Q ss_pred CCCCeEEEEEccCCCEEEEEECCC---eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEE-eCCCc-EEEeeeec
Q psy467 99 HKSSITSVDFHPYGDYLCSGSLDS---FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG-GEDGV-VRIGASFH 173 (845)
Q Consensus 99 h~~~V~~lafspdg~~Lasgs~DG---~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasg-s~DG~-I~I~~~~~ 173 (845)
+..+..+++|+|++++++++..++ .|.+||+.+++.+..+.. .....+++|+|||++++++ ..++. +.+
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~----- 155 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRR----- 155 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEE-----
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEE-----
Confidence 666666599999999999655553 899999999998888764 4457999999999865554 55577 999
Q ss_pred cCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCC
Q psy467 174 LTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPC 253 (845)
Q Consensus 174 ~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~ 253 (845)
|++..... +.....
T Consensus 156 --------~~~~~~g~--------------------~~~~~~-------------------------------------- 169 (331)
T 3u4y_A 156 --------FKIDADGV--------------------LFDTGQ-------------------------------------- 169 (331)
T ss_dssp --------EEECTTCC--------------------EEEEEE--------------------------------------
T ss_pred --------EEECCCCc--------------------EeecCC--------------------------------------
Confidence 99875333 111000
Q ss_pred ceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE---EEEecCCCCCEEEEEE
Q psy467 254 DYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL---VSTTEKNSSTIRRLTF 330 (845)
Q Consensus 254 ~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~---l~tl~gh~~~Vtslaf 330 (845)
.. + +.+ .....++|+|||+. +++++..++.|.+||+.+++. +..+..+ ..+..++|
T Consensus 170 -~~--~-~~~------------~~~~~~~~spdg~~----l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~ 228 (331)
T 3u4y_A 170 -EF--I-SGG------------TRPFNITFTPDGNF----AFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVV 228 (331)
T ss_dssp -EE--E-CSS------------SSEEEEEECTTSSE----EEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEE
T ss_pred -cc--c-cCC------------CCccceEECCCCCE----EEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEE
Confidence 00 0 111 12345666666652 445555789999999998887 7777653 56789999
Q ss_pred eCCCCEEEEEeC-CC-EEEEEecCCce--EEEecCC----CC---CeEEEEEc-CCceEEEE------EEEEeeCCCCCc
Q psy467 331 SEGGECLLGGDT-EG-LKVYGWEPARQ--YDAQPMG----WG---KVQDLAVT-GTQLWFRR------VGTWSHQDSGFS 392 (845)
Q Consensus 331 SpdG~~Lasgs~-DG-I~IWDl~tgk~--l~tl~~h----~~---~VtsVafS-dg~lLaaS------VsiW~~d~~~~~ 392 (845)
+|||++|++++. ++ |.+||..+++. +..+..+ .. .+..++|+ ||++|+++ |.+|.+......
T Consensus 229 spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 229 SRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVG 308 (331)
T ss_dssp CTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEE
T ss_pred CCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCccc
Confidence 999998877765 44 99999999877 4444322 22 23568999 89888665 899988766554
Q ss_pred cccCC
Q psy467 393 TLDSY 397 (845)
Q Consensus 393 ~~~~~ 397 (845)
.....
T Consensus 309 ~~~~~ 313 (331)
T 3u4y_A 309 YVAGI 313 (331)
T ss_dssp ECTTC
T ss_pred ceecc
Confidence 44333
No 133
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.88 E-value=7.3e-21 Score=239.39 Aligned_cols=338 Identities=9% Similarity=0.012 Sum_probs=234.7
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCC------CeEEEEECCCCeeEEEecCCCCCe-------EEEEEcCCCCEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDD------KKVNLWALGKSNCIMSLSGHSTPV-------ESVQFGNGEETLS 74 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~D------G~I~IWdl~t~~~i~~l~~h~~~V-------~sLafSpdg~~La 74 (845)
.+.+.+|.+.|.+++||| +|++||+++.+ ..|++|++.+++ ...+..|...+ .+++|+|||+.++
T Consensus 45 ~~~lt~~~~~v~~~~~SP-DG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~ 122 (1045)
T 1k32_A 45 TRKIVSNLGVINNARFFP-DGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLII 122 (1045)
T ss_dssp EEEEECSSSEEEEEEECT-TSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEE
T ss_pred EEEeeeCCCcccCeEECC-CCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEEE
Confidence 467889999999999999 99999988643 379999998876 67788888888 9999999999777
Q ss_pred EEECC------CcEEEEECCCCcEE-------------------------------------------------EEEcCC
Q psy467 75 AGCQS------GSIKIWNLAVPTVQ-------------------------------------------------RTLNGH 99 (845)
Q Consensus 75 Sgs~D------GtV~VWDl~tg~~v-------------------------------------------------~~l~~h 99 (845)
+++.+ ..|.+|++.+++.. ..+.+|
T Consensus 123 ~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~ 202 (1045)
T 1k32_A 123 STDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDM 202 (1045)
T ss_dssp EECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECC
T ss_pred EECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCC
Confidence 77644 35888887655432 122346
Q ss_pred CCCeEEEEEccCCCEEEEEECCCeEEEEECCC-CceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCce
Q psy467 100 KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTS 178 (845)
Q Consensus 100 ~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t-~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~ 178 (845)
...+.++.|+++ ..+++++.++.+.+|.+.. +.....+..|. .+..++|+|||++|+.+ .++.|.+
T Consensus 203 ~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~---------- 269 (1045)
T 1k32_A 203 STHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYI---------- 269 (1045)
T ss_dssp SSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEE----------
T ss_pred CCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEE----------
Confidence 667788889887 5667778889889998753 44455555554 46778999999998887 4788998
Q ss_pred eEEEECCCCccCCCCCC-------------CCCcceeec-CCCCeEEEEecCCCCCccceeeEeeecccccccccccch-
Q psy467 179 IHVVDLSLVHPLGTPPP-------------QYTSSVPFS-HNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEE- 243 (845)
Q Consensus 179 I~vWDl~tg~~l~~~~~-------------~~i~svs~s-pdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~- 243 (845)
||+...... .+.. ..+..++|+ |+|+.++..... .+.++.+.............
T Consensus 270 ---~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~-------~i~~~~~~~~~~~~~~~~~~~ 338 (1045)
T 1k32_A 270 ---FNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRG-------QAFIQDVSGTYVLKVPEPLRI 338 (1045)
T ss_dssp ---ECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETT-------EEEEECTTSSBEEECSCCSCE
T ss_pred ---ecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEEcC-------EEEEEcCCCCceEEccCCCcc
Confidence 887433322 2221 257889999 999987765411 11122211111000000000
Q ss_pred hh----h------hhccCCCceeE-EEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCC
Q psy467 244 EL----F------ATIANPCDYSA-IFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKF 312 (845)
Q Consensus 244 ~l----~------~~~~~~~~~~l-~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~ 312 (845)
.. + ..... ..... .+...+... .....+...+..++|||||+ +|++++.++.|++||+.++
T Consensus 339 ~~~~~~~sdg~~l~~~s~-~~~l~~~~d~~~~~~--~~l~~~~~~~~~~~~SpDG~-----~la~~~~~~~v~~~d~~tg 410 (1045)
T 1k32_A 339 RYVRRGGDTKVAFIHGTR-EGDFLGIYDYRTGKA--EKFEENLGNVFAMGVDRNGK-----FAVVANDRFEIMTVDLETG 410 (1045)
T ss_dssp EEEEECSSSEEEEEEEET-TEEEEEEEETTTCCE--EECCCCCCSEEEEEECTTSS-----EEEEEETTSEEEEEETTTC
T ss_pred eEEeeeEcCCCeEEEEEC-CCceEEEEECCCCCc--eEecCCccceeeeEECCCCC-----EEEEECCCCeEEEEECCCC
Confidence 00 0 00000 00111 122222100 01113345678999999999 8999999999999999999
Q ss_pred eEEEEecCCCCCEEEEEEeCCCCEEEEEeCC----------C-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 313 SLVSTTEKNSSTIRRLTFSEGGECLLGGDTE----------G-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 313 ~~l~tl~gh~~~VtslafSpdG~~Lasgs~D----------G-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
+....+.+|.+.+.+++|||||++|++++.+ + |++||+.+++ +..+..|...+.+++|+ ||+.|+..
T Consensus 411 ~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 411 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEE
T ss_pred ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEE
Confidence 9888887898999999999999999887642 3 9999999887 67788888899999999 99988766
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=2.3e-20 Score=200.30 Aligned_cols=298 Identities=11% Similarity=0.038 Sum_probs=203.7
Q ss_pred CEEEEEeCCCeEEEEECCCCeeEEEecCCCC--CeEEEEEcCCCCEEEE-EECCCcEEEEECCCCcEEEEEcCCC-----
Q psy467 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHST--PVESVQFGNGEETLSA-GCQSGSIKIWNLAVPTVQRTLNGHK----- 100 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~--~V~sLafSpdg~~LaS-gs~DGtV~VWDl~tg~~v~~l~~h~----- 100 (845)
+++++++.++.|.+||..+++.+..+..... .+.+++|+|+++++++ +..++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 5789999999999999999998888763322 5889999999987654 4557899999999999887775321
Q ss_pred CCeEEEEEccCCCEEEEEE------------CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 101 SSITSVDFHPYGDYLCSGS------------LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 101 ~~V~~lafspdg~~Lasgs------------~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
..+.+++|+|+|+++++++ .++.|.+||+.+++.+..+.. ...+.+++|+|+|++|+++ ++.+.+
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 2577899999999998886 579999999999888877764 4568889999999988887 578999
Q ss_pred eeeeccCCceeEEEECCCCccCCCCC-CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhh
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLGTPP-PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~~~~-~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~ 247 (845)
||+.+++...... ......+.++|+++.+......... ...++....... +.... .
T Consensus 159 -------------~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~----~~~~~~~~~~~~-----~~~~~-~ 215 (337)
T 1pby_B 159 -------------MDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGV----MATPFYTARKDI-----DPADP-T 215 (337)
T ss_dssp -------------EETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTE----EEEEEEEEBTTS-----CTTSG-G
T ss_pred -------------EECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCc----eeeeeecccccc-----ccccc-c
Confidence 9998887653333 1223455788888755322111110 000000000000 00000 0
Q ss_pred hccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEE
Q psy467 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRR 327 (845)
Q Consensus 248 ~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vts 327 (845)
. .......+..................+.+++|+|||+ +++++ ++.|.+||+.+++.+..+..+ ..+.+
T Consensus 216 ~---~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~-----~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~ 284 (337)
T 1pby_B 216 A---YRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKT-----RAFGA--YNVLESFDLEKNASIKRVPLP-HSYYS 284 (337)
T ss_dssp G---EEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSS-----EEEEE--ESEEEEEETTTTEEEEEEECS-SCCCE
T ss_pred c---cccceEEEeCCCCCceEeecCCCCCceeeEEECCCCC-----EEEEe--CCeEEEEECCCCcCcceecCC-Cceee
Confidence 0 0000112222211000000011123566799999998 67776 799999999999988887753 46789
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCC
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGW 363 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~ 363 (845)
++|+|+|++|++++.++ |++||+.+++.+..+..+.
T Consensus 285 ~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 285 VNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp EEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred EEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 99999999999998888 9999999999888876543
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.88 E-value=8.7e-22 Score=236.32 Aligned_cols=328 Identities=10% Similarity=0.063 Sum_probs=217.8
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCC---CeEEEEEcCCCCEEEEEECC---------CcEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHST---PVESVQFGNGEETLSAGCQS---------GSIK 83 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~---~V~sLafSpdg~~LaSgs~D---------GtV~ 83 (845)
..+.+++|+| +|+++++ +.||+|++||+.+++....+..|.. .|.+++|||||++|++++.+ +.|.
T Consensus 17 ~~~~~~~~sp-dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 17 IHDPEAKWIS-DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCCBSS-SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred ccccccEEcC-CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 3578899999 8887776 7899999999999988888887765 49999999999999999764 7888
Q ss_pred EEECCCCcEEEEEc---CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCe---------------
Q psy467 84 IWNLAVPTVQRTLN---GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI--------------- 145 (845)
Q Consensus 84 VWDl~tg~~v~~l~---~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V--------------- 145 (845)
+||+.+++. ..+. .|...+..++|+|||+.|+.++. +.|++||+.+++.......+...+
T Consensus 95 ~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 95 LSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp EEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred EEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEec
Confidence 999998876 3443 34445889999999999999886 799999999887776655444333
Q ss_pred ---EEEEEecCCCEEEEEeCCC-cEEEeeee---------------c-----cCCceeEEEECCCCccCCCCC-------
Q psy467 146 ---NSIRFSPDGQWIASGGEDG-VVRIGASF---------------H-----LTNTSIHVVDLSLVHPLGTPP------- 194 (845)
Q Consensus 146 ---~sLafSPdg~~Lasgs~DG-~I~I~~~~---------------~-----~~~~~I~vWDl~tg~~l~~~~------- 194 (845)
.+++|+|||++|++++.|+ .+.+|... . .....+.+||+.+++....+.
T Consensus 173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence 7899999999999887553 23222211 0 012367889998887432222
Q ss_pred -CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccc
Q psy467 195 -PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVP 273 (845)
Q Consensus 195 -~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~ 273 (845)
...+..++|+|||+.+........ ....+.++++...... ..+.....+.
T Consensus 253 ~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~i~~~d~~~g~~~------------------~~~~~~~~~~--------- 303 (723)
T 1xfd_A 253 REYYITMVKWATSTKVAVTWLNRAQ--NVSILTLCDATTGVCT------------------KKHEDESEAW--------- 303 (723)
T ss_dssp SSEEEEEEEESSSSEEEEEEEETTS--CEEEEEEEETTTCCEE------------------EEEEEECSSC---------
T ss_pred ccceeEEEEEeCCCeEEEEEEcCCC--CeEEEEEEeCCCCcce------------------EEEEeccCCE---------
Confidence 234667999999997755433211 1122222221110000 0000000010
Q ss_pred cccCceeEEEcCCCCcccceEEEE-EeCCC------eEEEEE-CCCCe--EEEEecCCCCCEEE-EEEeCCCCEEEEEeC
Q psy467 274 VSVSRTSLSILPQSPMLCFILTTS-SSADR------TVNFWD-LEKFS--LVSTTEKNSSTIRR-LTFSEGGECLLGGDT 342 (845)
Q Consensus 274 ~~~~I~slafSPdg~~~~~~lLat-gs~DG------~I~IWD-l~s~~--~l~tl~gh~~~Vts-lafSpdG~~Lasgs~ 342 (845)
.......++|+|||+. ++++ +..++ .|++|| ...+. +...+..+...+.. ++|||||+.|+..+.
T Consensus 304 ~~~~~~~~~~spdg~~----l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~ 379 (723)
T 1xfd_A 304 LHRQNEEPVFSKDGRK----FFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLST 379 (723)
T ss_dssp CCCCCCCCEECTTSCS----EEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEES
T ss_pred EeccCCCceEcCCCCe----EEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEc
Confidence 0000136789999984 3333 55677 577788 34444 14445433344554 699999999986655
Q ss_pred C---C-EEEEEecCCc--eEEEecC---CCCCeEEEEEc-CCceEEEE
Q psy467 343 E---G-LKVYGWEPAR--QYDAQPM---GWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 343 D---G-I~IWDl~tgk--~l~tl~~---h~~~VtsVafS-dg~lLaaS 380 (845)
+ + ++||+++... ....+.. |...+..++|+ ||++++..
T Consensus 380 ~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 380 EDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp SSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred CCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence 4 6 9999987532 3444543 66779999999 99988876
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=2.9e-21 Score=202.01 Aligned_cols=246 Identities=13% Similarity=0.081 Sum_probs=183.8
Q ss_pred EeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC-CcEEEEEcCC-CCCeEEEEEccC
Q psy467 34 GGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV-PTVQRTLNGH-KSSITSVDFHPY 111 (845)
Q Consensus 34 gs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t-g~~v~~l~~h-~~~V~~lafspd 111 (845)
++.|+.|++||+.+++... +..|...|.+++|+|++++|++++ ++.|.+||+.+ ++.......+ ...+.+++|+|+
T Consensus 18 ~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred CCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 4578899999999887664 455889999999999999999986 88999999999 8777666555 367899999999
Q ss_pred CCEEEEEEC--CC--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEE-EEeCCCcEEEeeeeccCCceeEEEECC-
Q psy467 112 GDYLCSGSL--DS--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIA-SGGEDGVVRIGASFHLTNTSIHVVDLS- 185 (845)
Q Consensus 112 g~~Lasgs~--DG--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~La-sgs~DG~I~I~~~~~~~~~~I~vWDl~- 185 (845)
+++|++++. ++ .|..|++.++. ...+..+ ..+.+++|+|++++|+ +++.++.+.+ |++.
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l-------------~~~~~ 160 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDI-------------YSMDI 160 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEE-------------EEEET
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEE-------------EEEEC
Confidence 999999983 34 45555555544 3444433 3489999999999877 7778898888 7753
Q ss_pred -CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCC
Q psy467 186 -LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRS 264 (845)
Q Consensus 186 -tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~ 264 (845)
++.. ..+..+..
T Consensus 161 ~~~~~---------------------~~~~~~~~---------------------------------------------- 173 (297)
T 2ojh_A 161 DSGVE---------------------TRLTHGEG---------------------------------------------- 173 (297)
T ss_dssp TTCCE---------------------EECCCSSS----------------------------------------------
T ss_pred CCCcc---------------------eEcccCCC----------------------------------------------
Confidence 2221 11111111
Q ss_pred cCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECC-CCeEEEEecCCCCCEEEEEEeCCCCEEEEEeC
Q psy467 265 LNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLE-KFSLVSTTEKNSSTIRRLTFSEGGECLLGGDT 342 (845)
Q Consensus 265 ~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~-s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~ 342 (845)
.+.+++|+|+++ ++++++ .++.+.+|++. .+..+..+..|...+.+++|+|+|++|++++.
T Consensus 174 ------------~~~~~~~s~dg~-----~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 174 ------------RNDGPDYSPDGR-----WIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp ------------CEEEEEECTTSS-----EEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEE
T ss_pred ------------ccccceECCCCC-----EEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEc
Confidence 223444445544 666555 58899999886 45667778888888999999999999998876
Q ss_pred C-----------C-EEEEEecCCce--EEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 343 E-----------G-LKVYGWEPARQ--YDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 343 D-----------G-I~IWDl~tgk~--l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
+ + |.+||+.+++. +..+.+|...+.+++|+ +++.|+++
T Consensus 237 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 289 (297)
T 2ojh_A 237 DADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYV 289 (297)
T ss_dssp ETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEE
T ss_pred CCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEE
Confidence 5 4 99999998865 34455788899999999 88888765
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.88 E-value=1.8e-20 Score=219.94 Aligned_cols=305 Identities=9% Similarity=0.064 Sum_probs=214.8
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEEC--CCCeeEEEecCCCCCeEEEEEcC----CCCEEEEEEC-CC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWAL--GKSNCIMSLSGHSTPVESVQFGN----GEETLSAGCQ-SG 80 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl--~t~~~i~~l~~h~~~V~sLafSp----dg~~LaSgs~-DG 80 (845)
++++..+.. +.+++|+| +|++|++++.|+.|.+||+ .+++.+.++. +...+..++|+| +|++|++++. ++
T Consensus 172 ~~~i~~g~~-~~~v~~sp-dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~ 248 (543)
T 1nir_A 172 VKVIDTGYA-VHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPP 248 (543)
T ss_dssp EEEEECSTT-EEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESS
T ss_pred EEEEecCcc-cceEEECC-CCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCC
Confidence 355663333 89999999 9999999999999999999 8899888888 456689999999 9999999884 89
Q ss_pred cEEEEECCCCcEEEEEcCC-----------CCCeEEEEEccCCCE-EEEEECCCeEEEEECCCCceEE--EEcCCCCCeE
Q psy467 81 SIKIWNLAVPTVQRTLNGH-----------KSSITSVDFHPYGDY-LCSGSLDSFIKLWDLRRKGCIY--TYRGHSKSIN 146 (845)
Q Consensus 81 tV~VWDl~tg~~v~~l~~h-----------~~~V~~lafspdg~~-Lasgs~DG~I~IWDl~t~~~l~--~~~~h~~~V~ 146 (845)
+|.+||..+++++..+..+ ...+..+.++|++.. +++...++.|.+||+.+.+.+. .+. +...+.
T Consensus 249 ~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~ 327 (543)
T 1nir_A 249 QFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLH 327 (543)
T ss_dssp EEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCC
T ss_pred eEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCcc
Confidence 9999999999999888642 236889999998765 4566778999999998766543 443 566788
Q ss_pred EEEEecCCCEEEEEe-CCCcEEEeeeeccCCceeEEEECCCCccCCCCCC----CCCccee-ecCCCCeEEEEecCCCCC
Q psy467 147 SIRFSPDGQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPP----QYTSSVP-FSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 147 sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~----~~i~svs-~spdg~~l~~~~~h~~~~ 220 (845)
+++|+|+|+++++++ .+++|.+ ||..+++.+..+.. ..-+... ++|++..+.. ..+...
T Consensus 328 ~~~~spdg~~l~va~~~~~~v~v-------------~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~-s~~~~d- 392 (543)
T 1nir_A 328 DGGWDSSHRYFMTAANNSNKVAV-------------IDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWS-TSHLGD- 392 (543)
T ss_dssp CEEECTTSCEEEEEEGGGTEEEE-------------EETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEE-EEBSSS-
T ss_pred CceECCCCCEEEEEecCCCeEEE-------------EECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEE-eccCCC-
Confidence 999999999877655 5789999 99999887443221 1111222 2455332222 111111
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS- 299 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs- 299 (845)
..+.++++..... ++..+........+...+..++++|+|+ .|++++
T Consensus 393 --~~V~v~d~~~~~~-------------------------~~~~~~~v~~l~~~g~~~~~v~~~pdg~-----~l~v~~~ 440 (543)
T 1nir_A 393 --GSISLIGTDPKNH-------------------------PQYAWKKVAELQGQGGGSLFIKTHPKSS-----HLYVDTT 440 (543)
T ss_dssp --SEEEEEECCTTTC-------------------------TTTBTSEEEEEECSCSCCCCEECCTTCC-----EEEECCT
T ss_pred --ceEEEEEeCCCCC-------------------------chhcCeEEEEEEcCCCCceEEEcCCCCC-----cEEEecC
Confidence 1122322211000 0000000001111123456788999998 788876
Q ss_pred ------CCCeEEEEECCCCeEE-EEe--------cCCCCCEEEEEEeCCCCEEEEEe-----CCC-EEEEEecCCceEEE
Q psy467 300 ------ADRTVNFWDLEKFSLV-STT--------EKNSSTIRRLTFSEGGECLLGGD-----TEG-LKVYGWEPARQYDA 358 (845)
Q Consensus 300 ------~DG~I~IWDl~s~~~l-~tl--------~gh~~~VtslafSpdG~~Lasgs-----~DG-I~IWDl~tgk~l~t 358 (845)
.+++|.+||+.+++.. ..+ ..+...+..+.|+|+|+.|+++. .++ |.|||..+++++.+
T Consensus 441 ~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~ 520 (543)
T 1nir_A 441 FNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAV 520 (543)
T ss_dssp TCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEE
T ss_pred CCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEe
Confidence 2679999999998776 443 34567899999999999998763 357 99999999999999
Q ss_pred ecCCC
Q psy467 359 QPMGW 363 (845)
Q Consensus 359 l~~h~ 363 (845)
++.+.
T Consensus 521 i~~~~ 525 (543)
T 1nir_A 521 VKDPR 525 (543)
T ss_dssp ECCTT
T ss_pred ecCCC
Confidence 88543
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.87 E-value=1.2e-19 Score=195.33 Aligned_cols=268 Identities=11% Similarity=0.115 Sum_probs=187.2
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCC-CeEEEEECC--CCe--eEEEecCCCCCeEEEEEcCCCCEEEEEEC-CCcEEEE
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDD-KKVNLWALG--KSN--CIMSLSGHSTPVESVQFGNGEETLSAGCQ-SGSIKIW 85 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~D-G~I~IWdl~--t~~--~i~~l~~h~~~V~sLafSpdg~~LaSgs~-DGtV~VW 85 (845)
..|...+.+++|+| +|++|++++.+ +.|.+|++. +++ .+..+..+. .+.+++|+|++++|++++. ++.|.+|
T Consensus 34 ~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 34 VDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp EECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EecCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 45788899999999 89988888876 899999997 544 344555444 7899999999998877765 8889999
Q ss_pred ECC---CCcEEEEEcCCCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCC-CceEE----EEcC-CCCCeEEEEEecCCC
Q psy467 86 NLA---VPTVQRTLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRR-KGCIY----TYRG-HSKSINSIRFSPDGQ 155 (845)
Q Consensus 86 Dl~---tg~~v~~l~~h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t-~~~l~----~~~~-h~~~V~sLafSPdg~ 155 (845)
|+. +.+.+..+..+ ..+.+++|+|+++++++++ .++.|.+||+.+ ++... .+.. ....+.+++|+|+++
T Consensus 112 d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred ECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 994 34455555533 4588999999999888887 899999999987 54432 2222 345788999999999
Q ss_pred EEEEEe-CCCcEEEeeeeccCCceeEEEECCC--CccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 156 WIASGG-EDGVVRIGASFHLTNTSIHVVDLSL--VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 156 ~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~t--g~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
++++++ .++.+.+ ||+.. +.. .....+..
T Consensus 191 ~l~~~~~~~~~i~~-------------~~~~~~~g~~------------------~~~~~~~~----------------- 222 (343)
T 1ri6_A 191 YAYCVNELNSSVDV-------------WELKDPHGNI------------------ECVQTLDM----------------- 222 (343)
T ss_dssp EEEEEETTTTEEEE-------------EESSCTTSCC------------------EEEEEEEC-----------------
T ss_pred EEEEEeCCCCEEEE-------------EEecCCCCcE------------------EEEeeccc-----------------
Confidence 776655 7889999 99853 222 00011000
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE-EEeCCCeEEEEECC-
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT-SSSADRTVNFWDLE- 310 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa-tgs~DG~I~IWDl~- 310 (845)
.+.+. .....+..++|+|+|+ +|+ ++..++.|.+||+.
T Consensus 223 ---------------------------~~~~~--------~~~~~~~~i~~s~dg~-----~l~v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 223 ---------------------------MPENF--------SDTRWAADIHITPDGR-----HLYACDRTASLITVFSVSE 262 (343)
T ss_dssp ---------------------------SCTTC--------CSCCCEEEEEECTTSS-----EEEEEETTTTEEEEEEECT
T ss_pred ---------------------------cCccc--------cccCCccceEECCCCC-----EEEEEecCCCEEEEEEEcC
Confidence 00000 0012234566666665 554 55579999999998
Q ss_pred ---CCeEEEEecCCCCCEEEEEEeCCCCEEEEEe-CCC-EEEEEec--CCc--eEEEecCCCCCeEEEEEc
Q psy467 311 ---KFSLVSTTEKNSSTIRRLTFSEGGECLLGGD-TEG-LKVYGWE--PAR--QYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 311 ---s~~~l~tl~gh~~~VtslafSpdG~~Lasgs-~DG-I~IWDl~--tgk--~l~tl~~h~~~VtsVafS 372 (845)
+.+.+..+..+.. +.+++|+|+|++|++++ .++ |.+|+++ +++ .+..+.. .....+++|.
T Consensus 263 ~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~ 331 (343)
T 1ri6_A 263 DGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVN 331 (343)
T ss_dssp TSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEE
T ss_pred CCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEE
Confidence 3345556655444 89999999999999888 466 9999766 553 3344443 2456677776
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=1.1e-20 Score=197.76 Aligned_cols=237 Identities=13% Similarity=0.106 Sum_probs=175.0
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC-CeeEEEecCC-CCCeEEEEEcCCCCEEEEEEC--CCcEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK-SNCIMSLSGH-STPVESVQFGNGEETLSAGCQ--SGSIK 83 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t-~~~i~~l~~h-~~~V~sLafSpdg~~LaSgs~--DGtV~ 83 (845)
...+..|...|.+++|+| +|++|++++ ++.|.+||+.+ ++.......| ...+.+++|+|++++|++++. ++.+.
T Consensus 34 ~~~~~~~~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 111 (297)
T 2ojh_A 34 MRVVWQTPELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSA 111 (297)
T ss_dssp EEEEEEESSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCE
T ss_pred eeeeccCCcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcce
Confidence 356778999999999999 999999987 78999999998 8777666665 467899999999999999983 34455
Q ss_pred EE--ECCCCcEEEEEcCCCCCeEEEEEccCCCEEE-EEECCCeEEEEECC-CCceEEEEcCCCCCeEEEEEecCCCEEEE
Q psy467 84 IW--NLAVPTVQRTLNGHKSSITSVDFHPYGDYLC-SGSLDSFIKLWDLR-RKGCIYTYRGHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 84 VW--Dl~tg~~v~~l~~h~~~V~~lafspdg~~La-sgs~DG~I~IWDl~-t~~~l~~~~~h~~~V~sLafSPdg~~Las 159 (845)
|| +..++. ...+..+ ..+.+++|+|++++|+ +++.++.+.+|++. .......+..+...+.+++|+|++++|+.
T Consensus 112 l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 189 (297)
T 2ojh_A 112 IYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYF 189 (297)
T ss_dssp EEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEE
T ss_pred EEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEE
Confidence 54 555554 4445433 3489999999999887 77889999999863 23344566667888999999999998887
Q ss_pred Ee-CCCcEEEeeeeccCCceeEEEECC-CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccc
Q psy467 160 GG-EDGVVRIGASFHLTNTSIHVVDLS-LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE 237 (845)
Q Consensus 160 gs-~DG~I~I~~~~~~~~~~I~vWDl~-tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~ 237 (845)
++ .++.+.+ |++. .+.. +..+..+... +
T Consensus 190 ~~~~~~~~~i-------------~~~~~~~~~--------------------~~~~~~~~~~-------~---------- 219 (297)
T 2ojh_A 190 NSSRTGQMQI-------------WRVRVDGSS--------------------VERITDSAYG-------D---------- 219 (297)
T ss_dssp EECTTSSCEE-------------EEEETTSSC--------------------EEECCCCSEE-------E----------
T ss_pred EecCCCCccE-------------EEECCCCCC--------------------cEEEecCCcc-------c----------
Confidence 66 5888888 8765 2222 2222221111 2
Q ss_pred ccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC-----------CeEEE
Q psy467 238 DQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD-----------RTVNF 306 (845)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D-----------G~I~I 306 (845)
..+.|+|++. +|++++.+ +.|++
T Consensus 220 -----------------~~~~~s~dg~-----------------------------~l~~~~~~~~~~~~~~~~~~~l~~ 253 (297)
T 2ojh_A 220 -----------------WFPHPSPSGD-----------------------------KVVFVSYDADVFDHPRDLDVRVQL 253 (297)
T ss_dssp -----------------EEEEECTTSS-----------------------------EEEEEEEETTCCSCCSSEEEEEEE
T ss_pred -----------------CCeEECCCCC-----------------------------EEEEEEcCCCCCcccccCceEEEE
Confidence 3444555544 77777655 56999
Q ss_pred EECCCCeE--EEEecCCCCCEEEEEEeCCCCEEEEEeCCC
Q psy467 307 WDLEKFSL--VSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344 (845)
Q Consensus 307 WDl~s~~~--l~tl~gh~~~VtslafSpdG~~Lasgs~DG 344 (845)
||+.+++. +..+.+|...+.+++|+|+|++|++++.+.
T Consensus 254 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 254 MDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 99988754 445557888999999999999998887653
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=1.8e-19 Score=193.77 Aligned_cols=264 Identities=13% Similarity=0.201 Sum_probs=183.7
Q ss_pred EEEEEeCCCeEEEEECC-CC--eeEEEecCCCCCeEEEEEcCCCCEEEEEECC-CcEEEEECC--CCc--EEEEEcCCCC
Q psy467 30 VLATGGDDKKVNLWALG-KS--NCIMSLSGHSTPVESVQFGNGEETLSAGCQS-GSIKIWNLA--VPT--VQRTLNGHKS 101 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~-t~--~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D-GtV~VWDl~--tg~--~v~~l~~h~~ 101 (845)
++++++.|+.|++|++. ++ +.+..+ .|...+.+++|+|++++|++++.+ +.|.+|++. +++ .+..+..+.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~- 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG- 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-
Confidence 44444779999999985 33 333333 477789999999999999998886 999999998 554 344555444
Q ss_pred CeEEEEEccCCCEEEEEEC-CCeEEEEECC---CCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEEeeeeccCC
Q psy467 102 SITSVDFHPYGDYLCSGSL-DSFIKLWDLR---RKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRIGASFHLTN 176 (845)
Q Consensus 102 ~V~~lafspdg~~Lasgs~-DG~I~IWDl~---t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~ 176 (845)
.+.+++|+|++++|++++. ++.|.+||+. ....+..+.. ...+.+++|+|+|+++++++ .++.|.+
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~-------- 155 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICL-------- 155 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEE--------
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEE--------
Confidence 7889999999998877765 8899999994 3344555543 34688999999999888887 8899999
Q ss_pred ceeEEEECCC-CccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCce
Q psy467 177 TSIHVVDLSL-VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDY 255 (845)
Q Consensus 177 ~~I~vWDl~t-g~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~ 255 (845)
||+.+ ++. ......
T Consensus 156 -----~d~~~~~~~--------------------~~~~~~---------------------------------------- 170 (343)
T 1ri6_A 156 -----FTVSDDGHL--------------------VAQDPA---------------------------------------- 170 (343)
T ss_dssp -----EEECTTSCE--------------------EEEEEE----------------------------------------
T ss_pred -----EEecCCCce--------------------eeeccc----------------------------------------
Confidence 99876 332 110000
Q ss_pred eEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE-EEeCCCeEEEEECCC--CeE--EEEec----CC--CCC
Q psy467 256 SAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT-SSSADRTVNFWDLEK--FSL--VSTTE----KN--SST 324 (845)
Q Consensus 256 ~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa-tgs~DG~I~IWDl~s--~~~--l~tl~----gh--~~~ 324 (845)
.... +.+ ..+..++|+|+++ +++ ++..++.|.+||+.. ++. ...+. ++ ...
T Consensus 171 ~~~~-~~~------------~~~~~~~~~pdg~-----~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 232 (343)
T 1ri6_A 171 EVTT-VEG------------AGPRHMVFHPNEQ-----YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRW 232 (343)
T ss_dssp EEEC-STT------------CCEEEEEECTTSS-----EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCC
T ss_pred cccc-CCC------------CCcceEEECCCCC-----EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCC
Confidence 0000 000 1233455666655 554 555889999999953 332 33332 11 235
Q ss_pred EEEEEEeCCCCEEEEEe-CCC-EEEEEec--CC--ceEEEecCCCCCeEEEEEc-CCceEEEE------EEEEeeCC
Q psy467 325 IRRLTFSEGGECLLGGD-TEG-LKVYGWE--PA--RQYDAQPMGWGKVQDLAVT-GTQLWFRR------VGTWSHQD 388 (845)
Q Consensus 325 VtslafSpdG~~Lasgs-~DG-I~IWDl~--tg--k~l~tl~~h~~~VtsVafS-dg~lLaaS------VsiW~~d~ 388 (845)
+.+++|+|+|++|+++. .++ |.+|++. ++ +.+..+..+.. +.+++|+ +|++|+++ +.+|.++.
T Consensus 233 ~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 233 AADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred ccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 77899999999888555 577 9999998 33 44555555544 8999999 89888777 89997763
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=1.3e-19 Score=228.19 Aligned_cols=342 Identities=7% Similarity=-0.029 Sum_probs=226.1
Q ss_pred ceeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC---
Q psy467 3 AKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS--- 79 (845)
Q Consensus 3 irlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D--- 79 (845)
.++|..... .+.+.+.+.+||+ +.||.++. +.|++|++.+++ ...+..|...+.+++|||||++||+++.+
T Consensus 3 ~kl~~~~g~-~~~~~~~~~~~S~---~~iaf~~~-~~l~~~~~~gg~-~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~ 76 (1045)
T 1k32_A 3 FKLHEMHGL-CMPNLLLNPDIHG---DRIIFVCC-DDLWEHDLKSGS-TRKIVSNLGVINNARFFPDGRKIAIRVMRGSS 76 (1045)
T ss_dssp -----------CCCCCEEEEEET---TEEEEEET-TEEEEEETTTCC-EEEEECSSSEEEEEEECTTSSEEEEEEEESTT
T ss_pred ccccccccc-cccceEeCcEEeC---CEEEEEEC-CcEEEEECCCCc-EEEeeeCCCcccCeEECCCCCEEEEEEeeccC
Confidence 455554333 3567899999986 57887775 689999998765 45677899999999999999999988643
Q ss_pred ---CcEEEEECCCCcEEEEEcCCCCCe-------EEEEEccCCCEEEEEECC------CeEEEEECCCCceEE-------
Q psy467 80 ---GSIKIWNLAVPTVQRTLNGHKSSI-------TSVDFHPYGDYLCSGSLD------SFIKLWDLRRKGCIY------- 136 (845)
Q Consensus 80 ---GtV~VWDl~tg~~v~~l~~h~~~V-------~~lafspdg~~Lasgs~D------G~I~IWDl~t~~~l~------- 136 (845)
..|.+|++.+++ ...+..|...+ ..++|+|||+.+++++.+ ..|.+||+.++....
T Consensus 77 ~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~ 155 (1045)
T 1k32_A 77 LNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPAT 155 (1045)
T ss_dssp CCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCS
T ss_pred CCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcc
Confidence 479999998776 56777788878 899999999977777644 468888876554321
Q ss_pred ------------------------------------------EEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeecc
Q psy467 137 ------------------------------------------TYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHL 174 (845)
Q Consensus 137 ------------------------------------------~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~ 174 (845)
.+.+|...+.++.|+++ .++++++.|+.+.+
T Consensus 156 ~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l------ 228 (1045)
T 1k32_A 156 HILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQI------ 228 (1045)
T ss_dssp EEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEE------
T ss_pred eeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEE------
Confidence 11234444555555554 34444555555555
Q ss_pred CCceeEEEECC--CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccch---hhhhhc
Q psy467 175 TNTSIHVVDLS--LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEE---ELFATI 249 (845)
Q Consensus 175 ~~~~I~vWDl~--tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~---~l~~~~ 249 (845)
|.+. .+..............+|+|+|+.+..... ..+.++++...... ...... ......
T Consensus 229 -------~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~-------~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~ 293 (1045)
T 1k32_A 229 -------YSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKG-------GSIYIFNPDTEKIE-KIEIGDLESPEDRII 293 (1045)
T ss_dssp -------EEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEET-------TEEEEECTTTCCEE-ECCCCCCCBCCSEEE
T ss_pred -------EEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeC-------CEEEEecCCceEee-eeccCcccccccccc
Confidence 6654 222211112233556799999997766421 12223322110000 000000 000000
Q ss_pred cCCCceeEEEc-CCCCcCC-------------CCcc---ccccc-CceeEEEcCCCCcccceEEEEEeCCCeEE-EEECC
Q psy467 250 ANPCDYSAIFQ-PHRSLNR-------------SGTC---VPVSV-SRTSLSILPQSPMLCFILTTSSSADRTVN-FWDLE 310 (845)
Q Consensus 250 ~~~~~~~l~fs-pdg~~~~-------------~~~~---~~~~~-~I~slafSPdg~~~~~~lLatgs~DG~I~-IWDl~ 310 (845)
.......++|+ |++..+. .+.. ..+.. .+..++|+ ||+ .+++++.++.+. +||+.
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~-----~l~~~s~~~~l~~~~d~~ 367 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKV-----AFIHGTREGDFLGIYDYR 367 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEE-----EEEEEETTEEEEEEEETT
T ss_pred cccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCC-----eEEEEECCCceEEEEECC
Confidence 01123678888 8876331 1111 11223 67789999 998 788888888899 99998
Q ss_pred CCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 311 KFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 311 s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
+++... +.+|...+.+++|||||++|++++.++ |++||+.+++....+.+|.+.+.+++|| ||++|+++
T Consensus 368 ~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~ 438 (1045)
T 1k32_A 368 TGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYG 438 (1045)
T ss_dssp TCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEE
T ss_pred CCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEE
Confidence 876554 447888999999999999999999999 9999999999888887899999999999 99988654
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=1.7e-19 Score=216.09 Aligned_cols=275 Identities=10% Similarity=0.042 Sum_probs=200.0
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC-----C
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV-----P 90 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t-----g 90 (845)
..|.+++||| + ..++.+. ++.|++||+.+++... +..+...+.+++|+|||++|+++ .++.|.+||+.+ +
T Consensus 82 ~~v~~~~~sp-d-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 82 FPSFRTLDAG-R-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp CCCEEEEETT-T-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred cCceeEEECC-C-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC
Confidence 5699999999 6 5555553 5899999998887654 44567789999999999999996 689999999998 7
Q ss_pred cEEEEEcCCCCC--------------eEEEEEccCCCEEEEEE---------------------------------CCCe
Q psy467 91 TVQRTLNGHKSS--------------ITSVDFHPYGDYLCSGS---------------------------------LDSF 123 (845)
Q Consensus 91 ~~v~~l~~h~~~--------------V~~lafspdg~~Lasgs---------------------------------~DG~ 123 (845)
+.......+... +.+++|+|||++|++++ .+..
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 157 RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 766544433332 48899999999999987 4467
Q ss_pred EEEEECCCCceEEEEc--CCCCCeEEEEEecCCCEEEEEeCCC-----cEEEeeeeccCCceeEEEECCCCccCCCCCCC
Q psy467 124 IKLWDLRRKGCIYTYR--GHSKSINSIRFSPDGQWIASGGEDG-----VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQ 196 (845)
Q Consensus 124 I~IWDl~t~~~l~~~~--~h~~~V~sLafSPdg~~Lasgs~DG-----~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~ 196 (845)
|++||+.+++...... .+...+.+++|+|||++|++++.++ .|.+ ||+.+++.
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~-------------~d~~~g~~------- 296 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNA-------------YDAETGRF------- 296 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEE-------------EETTTCCE-------
T ss_pred EEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEE-------------EECCCCce-------
Confidence 9999999887654432 3566789999999999999887665 6667 99988743
Q ss_pred CCcceeecCCCCeEEEEe-cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccc
Q psy467 197 YTSSVPFSHNTSLRKSFT-KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVS 275 (845)
Q Consensus 197 ~i~svs~spdg~~l~~~~-~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~ 275 (845)
...+. ..... . .
T Consensus 297 -------------~~~~~~~~~~~--------------------------------------------~----------~ 309 (706)
T 2z3z_A 297 -------------VRTLFVETDKH--------------------------------------------Y----------V 309 (706)
T ss_dssp -------------EEEEEEEECSS--------------------------------------------C----------C
T ss_pred -------------eeEEEEccCCC--------------------------------------------e----------E
Confidence 11111 00000 0 0
Q ss_pred cCceeEEEcC--CCCcccceEEEEEeCCCeEEEEECC-CCeEEEEecCCCCCEEE-EEEeCCCCEEEEEeCC-C-----E
Q psy467 276 VSRTSLSILP--QSPMLCFILTTSSSADRTVNFWDLE-KFSLVSTTEKNSSTIRR-LTFSEGGECLLGGDTE-G-----L 345 (845)
Q Consensus 276 ~~I~slafSP--dg~~~~~~lLatgs~DG~I~IWDl~-s~~~l~tl~gh~~~Vts-lafSpdG~~Lasgs~D-G-----I 345 (845)
..+..++|+| ||+ ++++++.|+.++||++. ++..+..+..|...+.+ ++|+|+|+.|++++.+ + |
T Consensus 310 ~~~~~~~~sp~~dg~-----~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l 384 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQ-----FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHF 384 (706)
T ss_dssp CCCSCCEECTTCSSE-----EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEE
T ss_pred CccCCceeecCCCCE-----EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEE
Confidence 0123455666 665 88999999999999876 67778888888777877 8999999988766543 2 4
Q ss_pred EEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE---------EEEEeeCCC
Q psy467 346 KVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR---------VGTWSHQDS 389 (845)
Q Consensus 346 ~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS---------VsiW~~d~~ 389 (845)
..||+.+++ ...+. |...+.+++|+ ||++++.+ +.+|..+..
T Consensus 385 ~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 385 YCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred EEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 445555554 34443 67789999999 99888766 556655443
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=2e-19 Score=194.21 Aligned_cols=301 Identities=11% Similarity=0.056 Sum_probs=191.3
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCC-CCeEEEEEcCCCCEEEE-EECCCcEEEEECCCCcEEEEEc
Q psy467 20 CLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHS-TPVESVQFGNGEETLSA-GCQSGSIKIWNLAVPTVQRTLN 97 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~-~~V~sLafSpdg~~LaS-gs~DGtV~VWDl~tg~~v~~l~ 97 (845)
.+++++ ++.++++++.++.|.+||..+++.+..+..+. ..+..++|+|+++++++ +..++.|.+||+.+++.+..+.
T Consensus 4 g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cccccC-CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 456777 88899999999999999999999888887443 25789999999987654 4468999999999998887776
Q ss_pred CCC------CCeEEEEEccCCCEEEEEECC------------CeEEEEECCCCc---eEEEEcCCCCCeEEEEEecCCCE
Q psy467 98 GHK------SSITSVDFHPYGDYLCSGSLD------------SFIKLWDLRRKG---CIYTYRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 98 ~h~------~~V~~lafspdg~~Lasgs~D------------G~I~IWDl~t~~---~l~~~~~h~~~V~sLafSPdg~~ 156 (845)
.+. ..+.+++|+|+|+++++++.+ +.|.+||+.+++ .+..+. +...+.+++|+|||+
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS- 160 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-
Confidence 332 237889999999999998865 899999998743 334444 344688999999999
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCC-CcceeecCCCCeEEEEecCCCCCccceeeEeeeccccc
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQY-TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAE 235 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~-i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~ 235 (845)
+++++. .|.+ ||..+++......... .......++... .+...... ........+.....
T Consensus 161 l~~~~~--~i~~-------------~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~d 221 (349)
T 1jmx_B 161 LYVAGP--DIYK-------------MDVKTGKYTVALPLRNWNRKGYSAPDVLY--FWPHQSPR--HEFSMLYTIARFKD 221 (349)
T ss_dssp EEEESS--SEEE-------------ECTTTCCEEEEECSTTCCCTTBCCCBCCC--CCCCCCTT--CEEEEEEEEEEC--
T ss_pred EEEccC--cEEE-------------EeCCCCceeccccccccCCccccCcccee--eecCCCcc--eeEEeeeeeeecCC
Confidence 555543 4888 9988877532221000 000000000000 00000000 00000000000000
Q ss_pred cc----ccccchhhh-hhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC-CCCcccceEEEEEeCCCeEEEEEC
Q psy467 236 SE----DQAGEEELF-ATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP-QSPMLCFILTTSSSADRTVNFWDL 309 (845)
Q Consensus 236 ~~----~~~~~~~l~-~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP-dg~~~~~~lLatgs~DG~I~IWDl 309 (845)
.. ........+ ..........+.+.+ ....+..++|+| |++ +++++ ++.|.+||+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~sp~dg~-----~l~~~--~~~v~~~d~ 282 (349)
T 1jmx_B 222 DKQDPATADLLYGYLSVDLKTGKTHTQEFAD------------LTELYFTGLRSPKDPN-----QIYGV--LNRLAKYDL 282 (349)
T ss_dssp -----CCCEEEEEEEEEETTTCCEEEEEEEE------------CSSCEEEEEECSSCTT-----EEEEE--ESEEEEEET
T ss_pred CcCCccccccceeEEEEeccCCcEEeccccc------------CCCcceeeEecCCCCC-----EEEEE--cCeEEEEEC
Confidence 00 000000000 000000001111111 223567889999 988 67776 889999999
Q ss_pred CCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCC
Q psy467 310 EKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMG 362 (845)
Q Consensus 310 ~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h 362 (845)
.+++.+..+... ..+.+++|+|+|++|++++.++ |++||+.+++.+..+...
T Consensus 283 ~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 283 KQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp TTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred ccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 999988887643 4578999999999998888888 999999999988887654
No 144
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.84 E-value=1.2e-18 Score=187.87 Aligned_cols=249 Identities=9% Similarity=0.091 Sum_probs=177.1
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeC-CCeEEEEECCCCee-EEEecCCCCCeEEEEEcCCCCEEEEEECCC---cEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGD-DKKVNLWALGKSNC-IMSLSGHSTPVESVQFGNGEETLSAGCQSG---SIK 83 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~-DG~I~IWdl~t~~~-i~~l~~h~~~V~sLafSpdg~~LaSgs~DG---tV~ 83 (845)
..+..+...+ +++|+| +|+++++++. ++.|.+||..+++. ...+..+..+..+++|+|++++|+++..++ .|.
T Consensus 34 ~~~~~~~~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~ 111 (331)
T 3u4y_A 34 NQITLGYDFV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQ 111 (331)
T ss_dssp EEEECCCCEE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEE
T ss_pred eeEEccCCcc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEE
Confidence 3455566667 999999 8886666655 88999999999887 777777777776699999999999655453 899
Q ss_pred EEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEE-ECCCe-EEEEECCCCceEE----EEcCCCCCeEEEEEecCCCEE
Q psy467 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG-SLDSF-IKLWDLRRKGCIY----TYRGHSKSINSIRFSPDGQWI 157 (845)
Q Consensus 84 VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasg-s~DG~-I~IWDl~t~~~l~----~~~~h~~~V~sLafSPdg~~L 157 (845)
+||+.+++.+..+..+ ....+++|+|+|++++++ ..++. |.+|++.....+. ........+.+++|+|+|+++
T Consensus 112 v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l 190 (331)
T 3u4y_A 112 SYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFA 190 (331)
T ss_dssp EEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEE
T ss_pred EEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEE
Confidence 9999999988888744 456899999999866554 55578 9999997544331 222344568999999999976
Q ss_pred EEEe-CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 158 ASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 158 asgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
++++ .++.|.+ ||+.+++... .+..+..+
T Consensus 191 ~v~~~~~~~v~v-------------~d~~~~~~~~-----------------~~~~~~~~-------------------- 220 (331)
T 3u4y_A 191 FVANLIGNSIGI-------------LETQNPENIT-----------------LLNAVGTN-------------------- 220 (331)
T ss_dssp EEEETTTTEEEE-------------EECSSTTSCE-----------------EEEEEECS--------------------
T ss_pred EEEeCCCCeEEE-------------EECCCCcccc-----------------eeeeccCC--------------------
Confidence 5555 6788999 9988665400 01111111
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEE-eCCCeEEEEECCCCeE-
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS-SADRTVNFWDLEKFSL- 314 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg-s~DG~I~IWDl~s~~~- 314 (845)
..+..++|+|||+ +++++ ..++.|.+||+.+++.
T Consensus 221 ---------------------------------------~~~~~~~~spdg~-----~l~v~~~~~~~i~~~d~~~~~~~ 256 (331)
T 3u4y_A 221 ---------------------------------------NLPGTIVVSRDGS-----TVYVLTESTVDVFNFNQLSGTLS 256 (331)
T ss_dssp ---------------------------------------SCCCCEEECTTSS-----EEEEECSSEEEEEEEETTTTEEE
T ss_pred ---------------------------------------CCCceEEECCCCC-----EEEEEEcCCCEEEEEECCCCcee
Confidence 1123445555555 55544 4578899999999877
Q ss_pred -EEEecCC----CC---CEEEEEEeCCCCEEEEEeCCC--EEEEEecCCc
Q psy467 315 -VSTTEKN----SS---TIRRLTFSEGGECLLGGDTEG--LKVYGWEPAR 354 (845)
Q Consensus 315 -l~tl~gh----~~---~VtslafSpdG~~Lasgs~DG--I~IWDl~tgk 354 (845)
+..+..+ .. .+..++|+|||++|++++.++ |.+||+....
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 257 FVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp EEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred eecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 4444432 21 235689999999997776654 9999997744
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.84 E-value=2.6e-19 Score=215.61 Aligned_cols=303 Identities=11% Similarity=0.081 Sum_probs=204.7
Q ss_pred CCCeEEEEEcCCCCEEEEEEC-CC-----cEEEEECCCCcEEEEEcCCCC------------------------CeEEEE
Q psy467 58 STPVESVQFGNGEETLSAGCQ-SG-----SIKIWNLAVPTVQRTLNGHKS------------------------SITSVD 107 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~-DG-----tV~VWDl~tg~~v~~l~~h~~------------------------~V~~la 107 (845)
...+.+++|+|||++|++++. |+ .|++||+.+++....+..+.. .+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999998 88 899999999988777764433 278999
Q ss_pred EccCCCEEEEEECCCeEEEEECCCCc--eEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECC
Q psy467 108 FHPYGDYLCSGSLDSFIKLWDLRRKG--CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLS 185 (845)
Q Consensus 108 fspdg~~Lasgs~DG~I~IWDl~t~~--~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~ 185 (845)
|+|||++|++++. +.|++||+.++. ....+..+...+.+++|+|||++|+.++. +.|++ ||+.
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~-------------~d~~ 180 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWV-------------IDLA 180 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEE-------------EETT
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEE-------------EecC
Confidence 9999999999886 999999998873 44456667788999999999999998874 57888 9998
Q ss_pred CCccCCCCCCCC------------------CcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhh-
Q psy467 186 LVHPLGTPPPQY------------------TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELF- 246 (845)
Q Consensus 186 tg~~l~~~~~~~------------------i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~- 246 (845)
+++......... +..+.|+|||+.+......... ...+....... .. ........-
T Consensus 181 ~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~--~~~~~~~~~~p--~~-~~~~~~~~~~ 255 (741)
T 2ecf_A 181 SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESP--VPVQKRYEVYA--DR-TDVIEQRYPA 255 (741)
T ss_dssp TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTT--SCEEEEEEECS--SC-EEEEEEECCB
T ss_pred CCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCC--CceEecCCCCC--Cc-ccceEeecCC
Confidence 876543332111 4789999999988765432211 00000000000 00 000000000
Q ss_pred hhccCCCceeEEEcCCC-CcCCCCcc-cccccCceeEEEcCCCCcccceEEEEEeC-----CCeEEEEECCCCeEEEEec
Q psy467 247 ATIANPCDYSAIFQPHR-SLNRSGTC-VPVSVSRTSLSILPQSPMLCFILTTSSSA-----DRTVNFWDLEKFSLVSTTE 319 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg-~~~~~~~~-~~~~~~I~slafSPdg~~~~~~lLatgs~-----DG~I~IWDl~s~~~l~tl~ 319 (845)
....+.......++.++ ........ ..+...+..++| |||+ .|++++. +..|++||+.++++...+.
T Consensus 256 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~-----~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~ 329 (741)
T 2ecf_A 256 AGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQ-----HLSFQRQSRDQKKLDLVEVTLASNQQRVLAH 329 (741)
T ss_dssp TTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETT-----EEEEEEEETTSSEEEEEEEETTTCCEEEEEE
T ss_pred CCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCC-----EEEEEEecccCCeEEEEEEECCCCceEEEEE
Confidence 00000000112233322 10000000 023456789999 9999 6665543 5689999999998877776
Q ss_pred CCCC----CEEEEEEeCCCCEEEEEeCCC-EEEEEec-CCceEEEecCCCCCeEEE-EEc-CCceEEEE--------EEE
Q psy467 320 KNSS----TIRRLTFSEGGECLLGGDTEG-LKVYGWE-PARQYDAQPMGWGKVQDL-AVT-GTQLWFRR--------VGT 383 (845)
Q Consensus 320 gh~~----~VtslafSpdG~~Lasgs~DG-I~IWDl~-tgk~l~tl~~h~~~VtsV-afS-dg~lLaaS--------Vsi 383 (845)
.+.. .+.+++|+|||+++++++.++ ++||.++ .++ ...+..|...|.++ .|+ +|+.|+++ +.+
T Consensus 330 ~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l 408 (741)
T 2ecf_A 330 ETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQI 408 (741)
T ss_dssp EECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEE
T ss_pred cCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEE
Confidence 5543 456899999999999999998 8888876 455 77888888889887 599 88877654 568
Q ss_pred EeeC
Q psy467 384 WSHQ 387 (845)
Q Consensus 384 W~~d 387 (845)
|.++
T Consensus 409 ~~~~ 412 (741)
T 2ecf_A 409 YAVP 412 (741)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 146
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.84 E-value=2.3e-19 Score=210.61 Aligned_cols=263 Identities=17% Similarity=0.113 Sum_probs=190.3
Q ss_pred CCcEEEEEEecCCCCEEEEEeC-CCeEEEEECCCCeeEEEecCCC-CCeEEEEEcCCCCEEEEEEC---CCcEEEEECCC
Q psy467 15 GASVNCLALGKKSGQVLATGGD-DKKVNLWALGKSNCIMSLSGHS-TPVESVQFGNGEETLSAGCQ---SGSIKIWNLAV 89 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~-DG~I~IWdl~t~~~i~~l~~h~-~~V~sLafSpdg~~LaSgs~---DGtV~VWDl~t 89 (845)
..+|.+++|+| ||+.||+++. ||+++||++.+++.. .+..|. ..+..++|+|| +.+++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~-DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVV-DGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCC-CCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 45799999999 9999999877 999999999666554 455555 68999999999 77777765 45556655432
Q ss_pred ---CcEEEEEcCCCCCeEEEEEccCCCE-EEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC--
Q psy467 90 ---PTVQRTLNGHKSSITSVDFHPYGDY-LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED-- 163 (845)
Q Consensus 90 ---g~~v~~l~~h~~~V~~lafspdg~~-Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D-- 163 (845)
+... .+.... .+...+|+|+++. +++.+.++.+.+||+.+++.......+ . .+++|+|||++|++++.+
T Consensus 98 ~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 98 SRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp TSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEET
T ss_pred cCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCC
Confidence 3322 444332 3557789998863 344444555669999988765554433 2 889999999999988766
Q ss_pred --CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 164 --GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 164 --G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
+.|++ ||+.+++. . .+..+... +
T Consensus 173 ~~~~i~~-------------~d~~~g~~--------------------~-~l~~~~~~-------~-------------- 197 (582)
T 3o4h_A 173 GRVSLFT-------------SNLSSGGL--------------------R-VFDSGEGS-------F-------------- 197 (582)
T ss_dssp TEEEEEE-------------EETTTCCC--------------------E-EECCSSCE-------E--------------
T ss_pred CCeEEEE-------------EcCCCCCc--------------------e-EeecCCCc-------c--------------
Confidence 56777 99887765 2 22333222 2
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCC--eEEEEECCCCeEEEEec
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR--TVNFWDLEKFSLVSTTE 319 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG--~I~IWDl~s~~~l~tl~ 319 (845)
..++|+|||+ .|+++..++ .|++||+.+++.. .+.
T Consensus 198 -------------~~~~~SpDG~-----------------------------~l~~~~~~~~~~i~~~d~~~~~~~-~~~ 234 (582)
T 3o4h_A 198 -------------SSASISPGMK-----------------------------VTAGLETAREARLVTVDPRDGSVE-DLE 234 (582)
T ss_dssp -------------EEEEECTTSC-----------------------------EEEEEECSSCEEEEEECTTTCCEE-ECC
T ss_pred -------------ccceECCCCC-----------------------------EEEEccCCCeeEEEEEcCCCCcEE-Ecc
Confidence 4455555555 888888888 8999999999887 777
Q ss_pred CCCCCEEEEE--------EeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEcCCceEEEE------EEEE
Q psy467 320 KNSSTIRRLT--------FSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVTGTQLWFRR------VGTW 384 (845)
Q Consensus 320 gh~~~Vtsla--------fSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafSdg~lLaaS------VsiW 384 (845)
+|...+..++ |||||.++++++.++ ++||++ ++... ...+.|.+++|+++++++++ -.+|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~sdg~~l~~~s~~~~p~~l~ 309 (582)
T 3o4h_A 235 LPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLWRGKLVTSHTSLSTPPRIV 309 (582)
T ss_dssp CSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred CCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEecCCEEEEEEcCCCCCCeEE
Confidence 7877777777 999999999999999 999999 66554 34467899999988877655 4456
Q ss_pred eeCC
Q psy467 385 SHQD 388 (845)
Q Consensus 385 ~~d~ 388 (845)
..+.
T Consensus 310 ~~d~ 313 (582)
T 3o4h_A 310 SLPS 313 (582)
T ss_dssp EETT
T ss_pred EEcC
Confidence 5553
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.82 E-value=1.3e-17 Score=180.63 Aligned_cols=231 Identities=12% Similarity=0.072 Sum_probs=181.0
Q ss_pred CCcEEEEEEecCCCCEEE-EEeCCCeEEEEECCCCeeEEEecCCCCC---------eEEEEEcCCCCEEEEEE--CCCcE
Q psy467 15 GASVNCLALGKKSGQVLA-TGGDDKKVNLWALGKSNCIMSLSGHSTP---------VESVQFGNGEETLSAGC--QSGSI 82 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~La-Tgs~DG~I~IWdl~t~~~i~~l~~h~~~---------V~sLafSpdg~~LaSgs--~DGtV 82 (845)
...+.+++|+| +|++++ ++..++.|.+||..+++.+..+..+... +.+++|+|+++++++++ .++.|
T Consensus 88 ~~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i 166 (353)
T 3vgz_A 88 DLKPFGATINN-TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVI 166 (353)
T ss_dssp SSCCCSEEEET-TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEE
T ss_pred CCCcceEEECC-CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceE
Confidence 44578899999 777555 4555799999999999988888765432 78999999999888776 47889
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC----CCCCeEEEEEecCCCEEE
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG----HSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~----h~~~V~sLafSPdg~~La 158 (845)
.+||..+++.+..+..+...+.+++|+|+++++++++.++.|.+||+.+++.+..+.. +...+.+++|+|++++++
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 246 (353)
T 3vgz_A 167 WVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAF 246 (353)
T ss_dssp EEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred EEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence 9999999999988875666688999999999999999999999999999998877764 455688899999999877
Q ss_pred EEeCC-CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccc
Q psy467 159 SGGED-GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE 237 (845)
Q Consensus 159 sgs~D-G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~ 237 (845)
+++.+ +.|.+ ||..+++. +..+.... .
T Consensus 247 ~~~~~~~~v~~-------------~d~~~~~~--------------------~~~~~~~~-~------------------ 274 (353)
T 3vgz_A 247 ITDSKAAEVLV-------------VDTRNGNI--------------------LAKVAAPE-S------------------ 274 (353)
T ss_dssp EEESSSSEEEE-------------EETTTCCE--------------------EEEEECSS-C------------------
T ss_pred EEeCCCCEEEE-------------EECCCCcE--------------------EEEEEcCC-C------------------
Confidence 76654 88888 99987776 33322110 0
Q ss_pred ccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE
Q psy467 238 DQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST 317 (845)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t 317 (845)
..++|+|++. . ++++...++.|.+||+.+++.+..
T Consensus 275 -----------------~~~~~s~dg~------------------------~----l~v~~~~~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 275 -----------------LAVLFNPARN------------------------E----AYVTHRQAGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp -----------------CCEEEETTTT------------------------E----EEEEETTTTEEEEEETTTTEEEEE
T ss_pred -----------------ceEEECCCCC------------------------E----EEEEECCCCeEEEEECCCCeEEEE
Confidence 2344445444 1 344444789999999999999888
Q ss_pred ecCCCCCEEEEEEeCCCCEEEEEeCCC
Q psy467 318 TEKNSSTIRRLTFSEGGECLLGGDTEG 344 (845)
Q Consensus 318 l~gh~~~VtslafSpdG~~Lasgs~DG 344 (845)
+..+ ..+.+++|+|||++|+++..++
T Consensus 310 ~~~~-~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 310 FDTP-THPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EECC-SEEEEEEECTTSCEEEEEEECC
T ss_pred EecC-CCCCeEEEcCCCCEEEEEEccc
Confidence 8754 4689999999999887776653
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=3.6e-18 Score=186.14 Aligned_cols=274 Identities=9% Similarity=0.066 Sum_probs=178.4
Q ss_pred CCeEEEEEC--CCCeeEE-EecCCCCCeEEEEEcCCCCEEEEEEC---CCcEEEEECCCCc--EEEEEcCCCCCeEEEEE
Q psy467 37 DKKVNLWAL--GKSNCIM-SLSGHSTPVESVQFGNGEETLSAGCQ---SGSIKIWNLAVPT--VQRTLNGHKSSITSVDF 108 (845)
Q Consensus 37 DG~I~IWdl--~t~~~i~-~l~~h~~~V~sLafSpdg~~LaSgs~---DGtV~VWDl~tg~--~v~~l~~h~~~V~~laf 108 (845)
++.|.+|.+ .+++... ....+...+..++|+|+|+ |++++. ++.|.+|++.+++ .+..+..+...+..++|
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 456777765 4555433 2334556788899999999 555544 6899999998765 34444456777889999
Q ss_pred ccCCCEEEEEE-CCCeEEEEECCC-C--ceEEEEcCC---------CCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccC
Q psy467 109 HPYGDYLCSGS-LDSFIKLWDLRR-K--GCIYTYRGH---------SKSINSIRFSPDGQWIASGGEDGVVRIGASFHLT 175 (845)
Q Consensus 109 spdg~~Lasgs-~DG~I~IWDl~t-~--~~l~~~~~h---------~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~ 175 (845)
+|+|++|++++ .++.|.+|++.. + ..+..+... ...+.+++|+|||+++++...++.|.+
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~------- 166 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYV------- 166 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEE-------
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEE-------
Confidence 99999998888 679999999963 2 233333211 124889999999996666666888999
Q ss_pred CceeEEEECC-CCccC-----CCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhc
Q psy467 176 NTSIHVVDLS-LVHPL-----GTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI 249 (845)
Q Consensus 176 ~~~I~vWDl~-tg~~l-----~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~ 249 (845)
||+. ++... ..........++|+|+|+.+........ .+.++.+...... ....
T Consensus 167 ------~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~-----~v~v~~~~~~~g~------~~~~--- 226 (347)
T 3hfq_A 167 ------YNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS-----QIASLKYDTQTGA------FTQL--- 226 (347)
T ss_dssp ------EEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT-----EEEEEEEETTTTE------EEEE---
T ss_pred ------EEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCC-----EEEEEEecCCCCc------eEEe---
Confidence 8887 34321 1112335667999999997665443322 2223332210000 0000
Q ss_pred cCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE-EEEeCCCeEEEEECC---CCeEEEEecCCCCCE
Q psy467 250 ANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT-TSSSADRTVNFWDLE---KFSLVSTTEKNSSTI 325 (845)
Q Consensus 250 ~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL-atgs~DG~I~IWDl~---s~~~l~tl~gh~~~V 325 (845)
..+...+.+. .....+..++|+|||+ +| +++..++.|.+||+. ..+.+..+..+...+
T Consensus 227 -----~~~~~~~~~~--------~~~~~~~~i~~spdG~-----~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~ 288 (347)
T 3hfq_A 227 -----GIVKTIPADY--------TAHNGAAAIRLSHDGH-----FLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFP 288 (347)
T ss_dssp -----EEEESSCTTC--------CSCCEEEEEEECTTSC-----EEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCC
T ss_pred -----eeeeecCCCC--------CCCCcceeEEECCCCC-----EEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCc
Confidence 0011111110 0113467899999998 55 666678999999997 335666677666778
Q ss_pred EEEEEeCCCCEEEEEeCC-C-EEEEEec--CCceE
Q psy467 326 RRLTFSEGGECLLGGDTE-G-LKVYGWE--PARQY 356 (845)
Q Consensus 326 tslafSpdG~~Lasgs~D-G-I~IWDl~--tgk~l 356 (845)
.+++|+|||++|++++.+ + |.+|+++ +++..
T Consensus 289 ~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 289 RDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp CEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 999999999999988876 5 9999654 56544
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.82 E-value=9e-19 Score=210.07 Aligned_cols=289 Identities=10% Similarity=0.006 Sum_probs=193.9
Q ss_pred ceeeee------EEeccCCC---cEEEEEEecCCCCEEEEEeCC---------CeEEEEECCCCeeEEEec---CCCCCe
Q psy467 3 AKVEKA------EDFMAHGA---SVNCLALGKKSGQVLATGGDD---------KKVNLWALGKSNCIMSLS---GHSTPV 61 (845)
Q Consensus 3 irlw~l------~~L~gH~~---~V~~LafSp~dg~~LaTgs~D---------G~I~IWdl~t~~~i~~l~---~h~~~V 61 (845)
+++|++ ..+.+|.. .|.+++||| +|++|++++.+ +.|.+||+.+++. ..+. +|...+
T Consensus 39 i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~ 116 (723)
T 1xfd_A 39 VRLWNVETNTSTVLIEGKKIESLRAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKL 116 (723)
T ss_dssp EEEBCGGGCCCEEEECTTTTTTTTCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCC
T ss_pred EEEEECCCCcEEEEeccccccccccceEEECC-CCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccc
Confidence 456653 34555654 499999999 99999999764 7889999998876 3343 345558
Q ss_pred EEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCe------------------EEEEEccCCCEEEEEECCC-
Q psy467 62 ESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI------------------TSVDFHPYGDYLCSGSLDS- 122 (845)
Q Consensus 62 ~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V------------------~~lafspdg~~Lasgs~DG- 122 (845)
.+++|||||++||+++. +.|++||+.+++.......+...+ .+++|+|||++|++++.|+
T Consensus 117 ~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~ 195 (723)
T 1xfd_A 117 QYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDS 195 (723)
T ss_dssp SBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECT
T ss_pred cccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCC
Confidence 99999999999999975 799999999988776665444333 7899999999999887553
Q ss_pred ---------------------------------eEEEEECCCCceEEEEcCC------CCCeEEEEEecCCCEEEEEeCC
Q psy467 123 ---------------------------------FIKLWDLRRKGCIYTYRGH------SKSINSIRFSPDGQWIASGGED 163 (845)
Q Consensus 123 ---------------------------------~I~IWDl~t~~~l~~~~~h------~~~V~sLafSPdg~~Lasgs~D 163 (845)
.|++||+.+++....+..+ ...+.+++|+|||+++++....
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~ 275 (723)
T 1xfd_A 196 RVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNR 275 (723)
T ss_dssp TSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEET
T ss_pred ccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcC
Confidence 7999999988765666543 5678999999999988776533
Q ss_pred ----CcEEEeeeeccCCceeEEEECCCCccCCCC---CCCCC----cceeecCCCCeEEEE-ecCCCCCccceeeEeeec
Q psy467 164 ----GVVRIGASFHLTNTSIHVVDLSLVHPLGTP---PPQYT----SSVPFSHNTSLRKSF-TKGRPGGTKAKIDVTRIE 231 (845)
Q Consensus 164 ----G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~---~~~~i----~svs~spdg~~l~~~-~~h~~~~~~~~i~V~~i~ 231 (845)
..|.+ ||+.+++..... ...++ ..+.|+|||+.+... ...... ......++
T Consensus 276 ~~~~~~i~~-------------~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~-~~~~~~l~--- 338 (723)
T 1xfd_A 276 AQNVSILTL-------------CDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGG-RGKFYHIT--- 338 (723)
T ss_dssp TSCEEEEEE-------------EETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSS-SSCEEEEE---
T ss_pred CCCeEEEEE-------------EeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCC-CcceeEEE---
Confidence 34555 999888754322 12222 378999999987765 222221 00111121
Q ss_pred ccccccccccchhhhhhccCCCceeEEEc-CCCCcC-CCCcccccccCcee-EEEcCCCCcccceEEEEEeCC---CeEE
Q psy467 232 ENAESEDQAGEEELFATIANPCDYSAIFQ-PHRSLN-RSGTCVPVSVSRTS-LSILPQSPMLCFILTTSSSAD---RTVN 305 (845)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~l~fs-pdg~~~-~~~~~~~~~~~I~s-lafSPdg~~~~~~lLatgs~D---G~I~ 305 (845)
.+. ..+... ...........+.. ++|+|||+ .|+..+.+ +.++
T Consensus 339 --------------------------~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~-----~l~~~~~~~~~~~~~ 387 (723)
T 1xfd_A 339 --------------------------VSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGN-----KIYFLSTEDLPRRRQ 387 (723)
T ss_dssp --------------------------EECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTT-----EEEEEESSSCTTCCE
T ss_pred --------------------------EEeccCCCCccceeEeecCCeEEEeeeEEcCCCC-----EEEEEEcCCCCcceE
Confidence 122 111100 00000011122333 68889888 66655544 7899
Q ss_pred EEECCCC--eEEEEecC---CCCCEEEEEEeCCCCEEEEEeC
Q psy467 306 FWDLEKF--SLVSTTEK---NSSTIRRLTFSEGGECLLGGDT 342 (845)
Q Consensus 306 IWDl~s~--~~l~tl~g---h~~~VtslafSpdG~~Lasgs~ 342 (845)
+|++... .....+.. |...+..++|||||++|+....
T Consensus 388 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 388 LYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp EEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred EEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 9987642 23334443 5667899999999999887644
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.82 E-value=8.3e-19 Score=210.20 Aligned_cols=298 Identities=15% Similarity=0.142 Sum_probs=185.5
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE-EEecCCC-----------------CCeEEEEEcCCCCEEEEEEC
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI-MSLSGHS-----------------TPVESVQFGNGEETLSAGCQ 78 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i-~~l~~h~-----------------~~V~sLafSpdg~~LaSgs~ 78 (845)
.+..+.|+ |+.+++++.++ | +||+.+++.+ ..+..|. ..|.+++|+|| ..++.+.
T Consensus 27 ~~~~~~w~---g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~- 99 (706)
T 2z3z_A 27 YVVGLQWM---GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT- 99 (706)
T ss_dssp -CTTCEEE---TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-
T ss_pred cCCCCcCc---CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-
Confidence 35567786 56677777787 8 9999998873 3333332 57999999999 6666664
Q ss_pred CCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC-----CceEEEEcCCCCC---------
Q psy467 79 SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-----KGCIYTYRGHSKS--------- 144 (845)
Q Consensus 79 DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t-----~~~l~~~~~h~~~--------- 144 (845)
++.|++||+.+++..... .+...+.+++|+|||++|+++ .++.|++||+.+ ++.......+...
T Consensus 100 ~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 100 QGGLVGFDMLARKVTYLF-DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQ 177 (706)
T ss_dssp TTEEEEEETTTTEEEEEE-CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGG
T ss_pred CCEEEEEECCCCceEEcc-CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhh
Confidence 699999999988765544 466778899999999999885 689999999988 7766544433332
Q ss_pred -----eEEEEEecCCCEEEEEeCCC-cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCC
Q psy467 145 -----INSIRFSPDGQWIASGGEDG-VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRP 218 (845)
Q Consensus 145 -----V~sLafSPdg~~Lasgs~DG-~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~ 218 (845)
+.+++|+|||++|++++.|. .+.. ..+.+...... ......-...
T Consensus 178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~----------~~~~~~~~~~~-------------------~~~~~~y~~~ 228 (706)
T 2z3z_A 178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKP----------TPIVDYHPLEA-------------------ESKPLYYPMA 228 (706)
T ss_dssp GCTTCCCSEEECTTSSEEEEEEEECTTSCC----------EEEEECCSSSC-------------------EEEEECCCBT
T ss_pred hhcCCCceEEECCCCCEEEEEEECCCCCce----------EEeeccCCCCC-------------------ceEEeeCCCC
Confidence 47899999999999887331 1111 00011111000 0000000000
Q ss_pred --CCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE
Q psy467 219 --GGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT 296 (845)
Q Consensus 219 --~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa 296 (845)
......+.++++... ....... ...+...+..++|+|||+ .|+
T Consensus 229 g~~~~~~~l~~~d~~~~---------------------~~~~~~~---------~~~~~~~~~~~~~spdg~-----~l~ 273 (706)
T 2z3z_A 229 GTPSHHVTVGIYHLATG---------------------KTVYLQT---------GEPKEKFLTNLSWSPDEN-----ILY 273 (706)
T ss_dssp TSCCCEEEEEEEETTTT---------------------EEEECCC---------CSCTTCEEEEEEECTTSS-----EEE
T ss_pred CCCCCeeEEEEEECCCC---------------------ceEeecc---------CCCCceeEeeEEEECCCC-----EEE
Confidence 000001111111000 0000000 001123456777777777 788
Q ss_pred EEeCCC-----eEEEEECCCCeEEEEec--CCCC---CEEEEEEeC--CCCEEEEEeCCC-EEEEEec-CCceEEEecCC
Q psy467 297 SSSADR-----TVNFWDLEKFSLVSTTE--KNSS---TIRRLTFSE--GGECLLGGDTEG-LKVYGWE-PARQYDAQPMG 362 (845)
Q Consensus 297 tgs~DG-----~I~IWDl~s~~~l~tl~--gh~~---~VtslafSp--dG~~Lasgs~DG-I~IWDl~-tgk~l~tl~~h 362 (845)
+++.++ .|++||+.+++....+. .+.. .+.+++|+| ||++|++++.++ ++||.++ +++.+..+..|
T Consensus 274 ~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~ 353 (706)
T 2z3z_A 274 VAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKG 353 (706)
T ss_dssp EEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCS
T ss_pred EEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCC
Confidence 877665 89999999984333332 2222 346789999 999999999998 9999987 67778888888
Q ss_pred CCCeEE-EEEc-CCceEEEE--------EEEEeeC
Q psy467 363 WGKVQD-LAVT-GTQLWFRR--------VGTWSHQ 387 (845)
Q Consensus 363 ~~~Vts-VafS-dg~lLaaS--------VsiW~~d 387 (845)
...+.+ ++|+ +|+.|+++ +.+|..+
T Consensus 354 ~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 354 EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 888877 7999 88877655 3666654
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.81 E-value=3.2e-17 Score=179.78 Aligned_cols=264 Identities=12% Similarity=0.132 Sum_probs=178.9
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCC----CeEEEEECCC--Ce--eEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEE
Q psy467 14 HGASVNCLALGKKSGQVLATGGDD----KKVNLWALGK--SN--CIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKI 84 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~D----G~I~IWdl~t--~~--~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~V 84 (845)
|...+..++|+| +|++|++++.+ +.|.+|++.. ++ .+.....+......+++ ++++|++++ .++.|.+
T Consensus 48 ~~~~p~~l~~sp-dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSA-DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITV 124 (361)
T ss_dssp ECSCCCSEEECT-TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEE
T ss_pred cCCCCceEEECC-CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEE
Confidence 677888999999 89999998875 7999998865 43 33444445667888888 788887776 5789999
Q ss_pred EECCCCcEEEE----E--cC--------CCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCCCc-------e------EE
Q psy467 85 WNLAVPTVQRT----L--NG--------HKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRRKG-------C------IY 136 (845)
Q Consensus 85 WDl~tg~~v~~----l--~~--------h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t~~-------~------l~ 136 (845)
|++.....+.. + .+ +...+.+++|+|+|+++++++ .++.|.+|++.... . ..
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 99975432211 1 11 123358899999999776665 47899999987543 1 11
Q ss_pred EEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEec
Q psy467 137 TYRGHSKSINSIRFSPDGQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTK 215 (845)
Q Consensus 137 ~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~ 215 (845)
........+.+++|+|||+++++++ .++.|.+ ||+.++... .+..+..
T Consensus 205 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v-------------~~~~~g~~~------------------~~~~~~~ 253 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIA-------------FRYADGMLD------------------EIQTVAA 253 (361)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTCEEEE-------------EEEETTEEE------------------EEEEEES
T ss_pred eecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEE-------------EEecCCceE------------------EeEEEec
Confidence 1223455688999999999888777 5889999 998755430 0111110
Q ss_pred CCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE
Q psy467 216 GRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT 295 (845)
Q Consensus 216 h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL 295 (845)
.+.+. .....++|+|||+ +|
T Consensus 254 --------------------------------------------~~~~~-----------~~~~~i~~spdg~-----~l 273 (361)
T 3scy_A 254 --------------------------------------------DTVNA-----------QGSGDIHLSPDGK-----YL 273 (361)
T ss_dssp --------------------------------------------CSSCC-----------CCEEEEEECTTSS-----EE
T ss_pred --------------------------------------------CCCCC-----------CCcccEEECCCCC-----EE
Confidence 01000 1224566666666 66
Q ss_pred EEEeC--CCeEEEEECC--CCe--EEEEecCCCCCEEEEEEeCCCCEEEEEeC-CC-EEEEEec--CCceEEEec-CCCC
Q psy467 296 TSSSA--DRTVNFWDLE--KFS--LVSTTEKNSSTIRRLTFSEGGECLLGGDT-EG-LKVYGWE--PARQYDAQP-MGWG 364 (845)
Q Consensus 296 atgs~--DG~I~IWDl~--s~~--~l~tl~gh~~~VtslafSpdG~~Lasgs~-DG-I~IWDl~--tgk~l~tl~-~h~~ 364 (845)
+++.. ++.|.+|++. +++ .+..+.. ...+.+++|+|||++|++++. ++ |.+|.++ +++...... .+..
T Consensus 274 ~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~ 352 (361)
T 3scy_A 274 YASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVD 352 (361)
T ss_dssp EEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECS
T ss_pred EEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCC
Confidence 55554 5899999985 444 4555554 557889999999999999884 45 9997665 566544332 2446
Q ss_pred CeEEEEEc
Q psy467 365 KVQDLAVT 372 (845)
Q Consensus 365 ~VtsVafS 372 (845)
.+.+++|.
T Consensus 353 ~p~~v~~~ 360 (361)
T 3scy_A 353 KPVCLKFV 360 (361)
T ss_dssp SEEEEEEE
T ss_pred CCeEEEEc
Confidence 78898885
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=4.9e-18 Score=204.14 Aligned_cols=322 Identities=10% Similarity=0.056 Sum_probs=206.3
Q ss_pred EEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCC---CeEEEEEcCCCCEEEEEEC---------CCcEEEEE
Q psy467 19 NCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHST---PVESVQFGNGEETLSAGCQ---------SGSIKIWN 86 (845)
Q Consensus 19 ~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~---~V~sLafSpdg~~LaSgs~---------DGtV~VWD 86 (845)
.+++|+| +|+++++ +.|+.|++||+.+++....+.+|.. .+.+++|||||++|++++. ++.|++||
T Consensus 19 ~~~~~s~-dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 19 FFPNWIS-GQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCCEESS-SSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CccEECC-CCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 3789999 8865554 4699999999999988777765543 4899999999999999876 68999999
Q ss_pred CCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE-cCCCCCe-----------------EEE
Q psy467 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY-RGHSKSI-----------------NSI 148 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~-~~h~~~V-----------------~sL 148 (845)
+.+++.+.... ....+..++|+|||+.|+.+. ++.|++||+.+++..... .++...+ .++
T Consensus 97 ~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 97 LSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 99887621111 235688999999999999886 789999999887765432 2222222 489
Q ss_pred EEecCCCEEEEEeCC-CcEEEeeee--------------------ccCCceeEEEECCCCccC---CC-------CCCCC
Q psy467 149 RFSPDGQWIASGGED-GVVRIGASF--------------------HLTNTSIHVVDLSLVHPL---GT-------PPPQY 197 (845)
Q Consensus 149 afSPdg~~Lasgs~D-G~I~I~~~~--------------------~~~~~~I~vWDl~tg~~l---~~-------~~~~~ 197 (845)
+|||||++|++++.| +.+.++... ......+++||+.+++.. .. .+...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 999999999988765 222221100 011236777999987642 11 12345
Q ss_pred CcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCccc-----
Q psy467 198 TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCV----- 272 (845)
Q Consensus 198 i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~----- 272 (845)
+..++|+||++++......... ...+.++++... ..... .....
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~--~~~l~~~d~~~~---------------------------~~~g~--~~~~~~~~~~ 303 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQN--VSVLSICDFRED---------------------------WQTWD--CPKTQEHIEE 303 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTT--EEEEEEEEECSS---------------------------SSSEE--CCGGGEEEEE
T ss_pred EEEeEEeCCCeEEEEEeccccC--eEEEEEEcccCC---------------------------CCCCc--eEEEEecccc
Confidence 6789999998766553332211 111212110000 00000 00000
Q ss_pred ccccCce-----eEEEcCCCCcccceEEEEEeCCC--eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCC--
Q psy467 273 PVSVSRT-----SLSILPQSPMLCFILTTSSSADR--TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-- 343 (845)
Q Consensus 273 ~~~~~I~-----slafSPdg~~~~~~lLatgs~DG--~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~D-- 343 (845)
.+...+. .++|+|||+.+ +++++..+| .|.+||+.+++ ...+..+...+..+.++ +++.|+..+.+
T Consensus 304 ~~~~~~~~~~~~~~~~spdg~~l---~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~ 378 (719)
T 1z68_A 304 SRTGWAGGFFVSTPVFSYDAISY---YKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFE 378 (719)
T ss_dssp CSSSCSSSSSCCCCEECTTSSCE---EEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGG
T ss_pred cCCceEccccCCccEECCCCCeE---EEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCC
Confidence 0112233 67888888831 222344555 57778887766 44555556678888888 88888777655
Q ss_pred ---C-EEEEEecC--Cc-eEEEec----CCCCCeEEEEEc-CCceEEEE
Q psy467 344 ---G-LKVYGWEP--AR-QYDAQP----MGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 344 ---G-I~IWDl~t--gk-~l~tl~----~h~~~VtsVafS-dg~lLaaS 380 (845)
+ +++|.+.. +. ....+. +|...+..+.|+ ++++++.+
T Consensus 379 ~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~ 427 (719)
T 1z68_A 379 EYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALV 427 (719)
T ss_dssp GCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEE
T ss_pred CCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEE
Confidence 5 88998875 32 123333 266788899999 88877754
No 153
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.79 E-value=1.1e-17 Score=184.42 Aligned_cols=283 Identities=11% Similarity=0.003 Sum_probs=191.2
Q ss_pred eEEeccCCCcEEE-----EEEecCCCCEEEEEeC-CC--eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC
Q psy467 8 AEDFMAHGASVNC-----LALGKKSGQVLATGGD-DK--KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS 79 (845)
Q Consensus 8 l~~L~gH~~~V~~-----LafSp~dg~~LaTgs~-DG--~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D 79 (845)
+..+..|...+.. .+||| +|++|++++. +| .|.+||+.+++......++...+..++|+|||+.|+.++.+
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTR-DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred eEEecCCcccccchhhcCccCCC-CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 5678888877776 89999 9999998887 66 48888999988877777776666678899999999999999
Q ss_pred CcEEEEECCCCcEEEEEcCCCCCeEEEE--EccCCCEEEEEE----------------------CCCeEEEEECCCCceE
Q psy467 80 GSIKIWNLAVPTVQRTLNGHKSSITSVD--FHPYGDYLCSGS----------------------LDSFIKLWDLRRKGCI 135 (845)
Q Consensus 80 GtV~VWDl~tg~~v~~l~~h~~~V~~la--fspdg~~Lasgs----------------------~DG~I~IWDl~t~~~l 135 (845)
+.|.+||+.+++....+..+...+.... +++++++++... .++.|.+||+.+++..
T Consensus 102 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 181 (388)
T 3pe7_A 102 RNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST 181 (388)
T ss_dssp TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE
T ss_pred CeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE
Confidence 9999999999987776665665554444 489999887432 3467999999988654
Q ss_pred EEEcCCCCCeEEEEEec-CCCEEEEEeCCC------cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC
Q psy467 136 YTYRGHSKSINSIRFSP-DGQWIASGGEDG------VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS 208 (845)
Q Consensus 136 ~~~~~h~~~V~sLafSP-dg~~Lasgs~DG------~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~ 208 (845)
. +..+...+..++|+| ||+.|+.+..++ .|.+ +|...+..
T Consensus 182 ~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~-------------~d~~~~~~------------------- 228 (388)
T 3pe7_A 182 V-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWL-------------INEDGTNM------------------- 228 (388)
T ss_dssp E-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEE-------------EETTSCCC-------------------
T ss_pred E-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEE-------------EeCCCCce-------------------
Confidence 4 434666789999999 999988776532 4444 77654433
Q ss_pred eEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCC
Q psy467 209 LRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSP 288 (845)
Q Consensus 209 ~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~ 288 (845)
..+..+... ..+..++|+|||+
T Consensus 229 --~~l~~~~~~--------------------------------------------------------~~~~~~~~spdg~ 250 (388)
T 3pe7_A 229 --RKVKTHAEG--------------------------------------------------------ESCTHEFWVPDGS 250 (388)
T ss_dssp --EESCCCCTT--------------------------------------------------------EEEEEEEECTTSS
T ss_pred --EEeeeCCCC--------------------------------------------------------cccccceECCCCC
Confidence 111111100 0122334455554
Q ss_pred cccceEEEE-EeCCC----eEEEEECCCCeEE--EEecCCCCC---EEEEEEeCCCCEEEEE---------eCCC-EEEE
Q psy467 289 MLCFILTTS-SSADR----TVNFWDLEKFSLV--STTEKNSST---IRRLTFSEGGECLLGG---------DTEG-LKVY 348 (845)
Q Consensus 289 ~~~~~lLat-gs~DG----~I~IWDl~s~~~l--~tl~gh~~~---VtslafSpdG~~Lasg---------s~DG-I~IW 348 (845)
.|+. +..++ .|++||+.+++.. ..+.++... ...++|+|||+.|+.. ..+. |++|
T Consensus 251 -----~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~ 325 (388)
T 3pe7_A 251 -----ALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVF 325 (388)
T ss_dssp -----CEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEE
T ss_pred -----EEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEE
Confidence 4433 32222 3999999988743 333331000 1123799999988864 3344 9999
Q ss_pred EecCCceEEEecCCCC-----------CeEEEEEc-CCceEEEE------EEEEeeCC
Q psy467 349 GWEPARQYDAQPMGWG-----------KVQDLAVT-GTQLWFRR------VGTWSHQD 388 (845)
Q Consensus 349 Dl~tgk~l~tl~~h~~-----------~VtsVafS-dg~lLaaS------VsiW~~d~ 388 (845)
|+.+++. ..+..+.. .+.+++|+ ||+.|+.+ ..+|.++.
T Consensus 326 d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 326 NMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp ETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred eccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 9988765 44555554 57889999 99877765 55665543
No 154
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.78 E-value=4.8e-18 Score=193.64 Aligned_cols=153 Identities=16% Similarity=0.242 Sum_probs=127.1
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC----------eeEEE-----ecCCCCCeEEEEEcCCCCEEE----
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS----------NCIMS-----LSGHSTPVESVQFGNGEETLS---- 74 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~----------~~i~~-----l~~h~~~V~sLafSpdg~~La---- 74 (845)
+...++++++++ ++.++++++.++ +++|+.... ..+.. ...+...|.+++|+|++++|+
T Consensus 35 ~~~~~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 35 PKERSSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CCSCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEE
T ss_pred CCCCccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEe
Confidence 345689999999 888999999887 888875210 01111 113567899999999999999
Q ss_pred EEECCCcEEEEECCCC--------c---EEEEEcCCCCCeEEEEEccC-CCEEEEEECCCeEEEEECCCCceEEEEcCCC
Q psy467 75 AGCQSGSIKIWNLAVP--------T---VQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS 142 (845)
Q Consensus 75 Sgs~DGtV~VWDl~tg--------~---~v~~l~~h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~ 142 (845)
+|+.|+.|++||+.++ + .+..+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+....+|.
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~ 192 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST 192 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence 7788999999998754 1 24556679999999999998 7899999999999999999987777777788
Q ss_pred CCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 143 KSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 143 ~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
..|.+++|+|+|++|++|+.||.|++
T Consensus 193 ~~v~~v~wspdg~~lasgs~dg~v~i 218 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQNGTVVQ 218 (434)
T ss_dssp GCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred CceeEEEEcCCCCEEEEEcCCCcEEE
Confidence 89999999999999999999999999
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.77 E-value=4e-16 Score=171.05 Aligned_cols=275 Identities=9% Similarity=0.135 Sum_probs=178.5
Q ss_pred CCEEEEEe----CCCeEEEEEC--CCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC----CcEEEEECCC--Cc--EE
Q psy467 28 GQVLATGG----DDKKVNLWAL--GKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS----GSIKIWNLAV--PT--VQ 93 (845)
Q Consensus 28 g~~LaTgs----~DG~I~IWdl--~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D----GtV~VWDl~t--g~--~v 93 (845)
..++++|+ .++.|.+|.+ .+++.......+...+..++|+|++++|++++.+ +.|.+|++.. ++ .+
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe
Confidence 34566664 4568999976 4554433222267778889999999999999875 7999998875 43 33
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCCCceEEE------EcC--------CCCCeEEEEEecCCCEEE
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRRKGCIYT------YRG--------HSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t~~~l~~------~~~--------h~~~V~sLafSPdg~~La 158 (845)
.....+......+++ ++++|++++ .++.|.+|++.....+.. ..+ +...+.+++|+|||++++
T Consensus 93 ~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~ 170 (361)
T 3scy_A 93 NTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLL 170 (361)
T ss_dssp EEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEE
T ss_pred eEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEE
Confidence 344445556777888 788887776 578999999975432211 111 123458899999999776
Q ss_pred EEe-CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC-eEEEEecCCCCCccceeeEeeecccccc
Q psy467 159 SGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS-LRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 159 sgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~-~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
+++ .++.+.+ |++......... + +... + . .
T Consensus 171 ~~~~~~~~v~v-------------~~~~~~~~~~~~--------------~~l~~~--~---~-------~--------- 202 (361)
T 3scy_A 171 ADDLGTDQIHK-------------FNINPNANADNK--------------EKFLTK--G---T-------P--------- 202 (361)
T ss_dssp EEETTTTEEEE-------------EEECTTCCTTTC--------------CCCEEE--E---E-------E---------
T ss_pred EEeCCCCEEEE-------------EEEcCCCCcccc--------------cceeec--c---c-------c---------
Confidence 665 4788888 887643210000 0 0000 0 0 0
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECCCCeE-
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLEKFSL- 314 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~s~~~- 314 (845)
.....+.+ .....++|+|||+ ++++++ .++.|.+||+.+++.
T Consensus 203 -------------------~~~~~~~~------------~~~~~~~~spdg~-----~l~v~~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 203 -------------------EAFKVAPG------------SGPRHLIFNSDGK-----FAYLINEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp -------------------EEEECCTT------------CCEEEEEECTTSS-----EEEEEETTTCEEEEEEEETTEEE
T ss_pred -------------------cceecCCC------------CCCeEEEEcCCCC-----EEEEEcCCCCeEEEEEecCCceE
Confidence 00000011 1234566666665 666655 689999999987754
Q ss_pred -EEEec---CCCCCEEEEEEeCCCCEEEEEeCC--C-EEEEEec--CCc--eEEEecCCCCCeEEEEEc-CCceEEEE--
Q psy467 315 -VSTTE---KNSSTIRRLTFSEGGECLLGGDTE--G-LKVYGWE--PAR--QYDAQPMGWGKVQDLAVT-GTQLWFRR-- 380 (845)
Q Consensus 315 -l~tl~---gh~~~VtslafSpdG~~Lasgs~D--G-I~IWDl~--tgk--~l~tl~~h~~~VtsVafS-dg~lLaaS-- 380 (845)
+..+. .+.....+++|+|||++|+++..+ + |.+|+++ +++ .+..+.. ...+.+++|+ +|++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 247 EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEET
T ss_pred EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEEC
Confidence 33332 334567899999999999877765 5 9999996 454 4445554 5678999999 99988777
Q ss_pred ----EEEEeeCCC
Q psy467 381 ----VGTWSHQDS 389 (845)
Q Consensus 381 ----VsiW~~d~~ 389 (845)
+.+|.++..
T Consensus 326 ~~~~v~v~~~d~~ 338 (361)
T 3scy_A 326 DTNVIQIFERDQA 338 (361)
T ss_dssp TTTEEEEEEECTT
T ss_pred CCCCEEEEEEECC
Confidence 888877643
No 156
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.76 E-value=3.5e-17 Score=198.38 Aligned_cols=309 Identities=12% Similarity=0.095 Sum_probs=188.6
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCC-----eEEEEEcCCCCEEEEEECC---------C
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP-----VESVQFGNGEETLSAGCQS---------G 80 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~-----V~sLafSpdg~~LaSgs~D---------G 80 (845)
.....+++|+| +|++++++ |+.|++||+.+++....+.+|... ...++|||||++|+.++.+ +
T Consensus 16 ~~~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 16 RLKLYSLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCCEEECS-SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred cccccccEECC-CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 34567899999 88888886 899999999999988888877643 2347899999999998875 5
Q ss_pred cEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE-cCCCCCe--------------
Q psy467 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY-RGHSKSI-------------- 145 (845)
Q Consensus 81 tV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~-~~h~~~V-------------- 145 (845)
.+.+||+.+++.. .+..+...+...+|||||+.||.+. ++.|++||+.++...+.. .++...+
T Consensus 93 ~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 93 SYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 6779999998754 4666778899999999999998885 689999999887754322 2222222
Q ss_pred ---EEEEEecCCCEEEEEeCCCc-EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCc
Q psy467 146 ---NSIRFSPDGQWIASGGEDGV-VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGT 221 (845)
Q Consensus 146 ---~sLafSPdg~~Lasgs~DG~-I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~ 221 (845)
..+.|||||++||.++.|.. +.+ |++....... ........+.+...|... .
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~-------------~~~~~~~~~~-~~~~~~~~~~yp~~G~~~----------~ 226 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPL-------------IEYSFYSDES-LQYPKTVRVPYPKAGAVN----------P 226 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCE-------------EEEEECCSTT-CSSCEEEEEECCBTTSCC----------C
T ss_pred CCCcceEECCCCCEEEEEEEcccCCce-------------EEEEeecCCC-CCCCcceeecCCCCcCcC----------C
Confidence 35899999999998875543 666 5543211100 001111222232222110 0
Q ss_pred cceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC-
Q psy467 222 KAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA- 300 (845)
Q Consensus 222 ~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~- 300 (845)
...+.++++..... +.......+.... ....+...+..++|+|||+ +++....
T Consensus 227 ~~~l~v~d~~~~~~---------------~~~~~~~~l~~~~------~~~~~~~~~~~~~wspdg~-----~~~~~~~r 280 (740)
T 4a5s_A 227 TVKFFVVNTDSLSS---------------VTNATSIQITAPA------SMLIGDHYLCDVTWATQER-----ISLQWLRR 280 (740)
T ss_dssp EEEEEEEETTSCCS---------------SSCCCEEEECCCH------HHHTSCEEEEEEEEEETTE-----EEEEEEES
T ss_pred eeEEEEEECCCCCC---------------CCcceEEEecCCc------cCCCCCeEEEEEEEeCCCe-----EEEEEeCC
Confidence 01111222211000 0000000111000 0001223467788888887 5554432
Q ss_pred ---CCeEEEEECCCCe----EEE--Ee--cCCCCCEE-----EEEEeCCCCEEE-EEe-CCC---EEEEEecCCceEEEe
Q psy467 301 ---DRTVNFWDLEKFS----LVS--TT--EKNSSTIR-----RLTFSEGGECLL-GGD-TEG---LKVYGWEPARQYDAQ 359 (845)
Q Consensus 301 ---DG~I~IWDl~s~~----~l~--tl--~gh~~~Vt-----slafSpdG~~La-sgs-~DG---I~IWDl~tgk~l~tl 359 (845)
+..|++||+.+++ +.. .+ .+|...|. .++|+|||+.|+ ..+ .+| |.+|+.++++.. .+
T Consensus 281 ~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~l 359 (740)
T 4a5s_A 281 IQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FI 359 (740)
T ss_dssp STTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ES
T ss_pred CCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ec
Confidence 3479999998886 321 12 34665554 789999999877 665 444 888888776654 44
Q ss_pred cCCCCCeEEEEEcCCceEEE
Q psy467 360 PMGWGKVQDLAVTGTQLWFR 379 (845)
Q Consensus 360 ~~h~~~VtsVafSdg~lLaa 379 (845)
......|..+.+-|++.|+.
T Consensus 360 T~g~~~v~~~~~~d~~~i~f 379 (740)
T 4a5s_A 360 TKGTWEVIGIEALTSDYLYY 379 (740)
T ss_dssp CCSSSCEEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEEEeCCEEEE
Confidence 44445566554334554443
No 157
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.75 E-value=1.2e-15 Score=169.34 Aligned_cols=298 Identities=9% Similarity=0.044 Sum_probs=195.5
Q ss_pred CCCEEEEEe------CCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC----------CCcEEEEECCCC
Q psy467 27 SGQVLATGG------DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ----------SGSIKIWNLAVP 90 (845)
Q Consensus 27 dg~~LaTgs------~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~----------DGtV~VWDl~tg 90 (845)
+++++++.. .|+.|.+||..+++.+..+..+..+ .++|+||+++|++++. ++.|.+||..++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 556666654 3679999999999998888776655 8999999999998863 577999999999
Q ss_pred cEEEEEcCC------CCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEE-EcCCCCCeEEEEEecCC-CEEEEE
Q psy467 91 TVQRTLNGH------KSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYT-YRGHSKSINSIRFSPDG-QWIASG 160 (845)
Q Consensus 91 ~~v~~l~~h------~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~-~~~h~~~V~sLafSPdg-~~Lasg 160 (845)
+.+..+... ......++|+|||++|+++.. ++.|.+||+.+++.+.. +.. . ....+.+.|++ ..+++.
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~ 169 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTI 169 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEEEEEECTTSSSEEEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-C-CcceeEEcCCCCeeEEEE
Confidence 988887532 245678999999999998874 57999999999988877 542 2 23446677765 567788
Q ss_pred eCCCcEEEeeeeccCCceeEEEECCC-CccC------CCCC-CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 161 GEDGVVRIGASFHLTNTSIHVVDLSL-VHPL------GTPP-PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 161 s~DG~I~I~~~~~~~~~~I~vWDl~t-g~~l------~~~~-~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
+.||.+.+ |+... ++.. .... ......+.+++++..+.... .... +.+.++..
T Consensus 170 ~~dg~~~~-------------v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~-----v~v~d~~~ 230 (361)
T 2oiz_A 170 CGDGGLLT-------------INLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVS-YYGN-----VYSADFSG 230 (361)
T ss_dssp ETTSSEEE-------------EEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEB-TTSE-----EEEEECSS
T ss_pred CCCCcEEE-------------EEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEe-CCCe-----EEEEEecC
Confidence 88998888 65543 2221 0000 11111223344444332221 1111 11111100
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC-----------C
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA-----------D 301 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~-----------D 301 (845)
..... .....+... ......|.| .....++|+|+++ .+.++.. .
T Consensus 231 ~~~~~--~~~~~~~~~----~~~~~~~~p--------------~g~~~~a~~~dg~-----~lyv~~~~~~~~~~~~~~~ 285 (361)
T 2oiz_A 231 DEVKV--DGPWSLLND----EDKAKNWVP--------------GGYNLVGLHRASG-----RMYVFMHPDGKEGTHKFPA 285 (361)
T ss_dssp SSCEE--EEEEESCCH----HHHHTTCEE--------------CCSSCEEEETTTT-----EEEEEEESSCCTTCTTCCC
T ss_pred CCcee--cccccccCc----ccccccccc--------------CCeeEEEEecCCC-----eEEEEEccCCCcccccCCC
Confidence 00000 000000000 000000011 1122367888876 4444322 3
Q ss_pred CeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC--ceEEEecCCCCCeEEEEEc-CCc
Q psy467 302 RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA--RQYDAQPMGWGKVQDLAVT-GTQ 375 (845)
Q Consensus 302 G~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg--k~l~tl~~h~~~VtsVafS-dg~ 375 (845)
+.|.+||+.+++.+.++..+. +.+++|+|||++|++++. + |.+||..++ +.+.++..+......++++ +|+
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred ceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 589999999999999999876 999999999999999887 6 999999999 9999987777888999999 765
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.74 E-value=5.3e-17 Score=195.12 Aligned_cols=287 Identities=10% Similarity=0.062 Sum_probs=187.8
Q ss_pred cEEEEEEecCCCCEEEEEeC---------CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 17 SVNCLALGKKSGQVLATGGD---------DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~---------DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
.|.+++||| +|++||+++. ++.|++||+.+++.+... .....+.+++|||||+.||++. ++.|++|++
T Consensus 61 ~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~-~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~ 137 (719)
T 1z68_A 61 NASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN-ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQR 137 (719)
T ss_dssp TCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS-CCCSSBCCEEECSSTTCEEEEE-TTEEEEESS
T ss_pred ceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECCCCccccce-ecCcccccceECCCCCEEEEEE-CCeEEEEeC
Confidence 399999999 9999998876 689999999988763111 1235688999999999999985 789999999
Q ss_pred CCCcEEEEE-cCCCCCe-----------------EEEEEccCCCEEEEEECCC---------------------------
Q psy467 88 AVPTVQRTL-NGHKSSI-----------------TSVDFHPYGDYLCSGSLDS--------------------------- 122 (845)
Q Consensus 88 ~tg~~v~~l-~~h~~~V-----------------~~lafspdg~~Lasgs~DG--------------------------- 122 (845)
.+++..... .++...| .+++|+|||++|++++.|.
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~ 217 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKA 217 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBT
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCC
Confidence 988765433 2222222 4899999999999987652
Q ss_pred -------eEEEEECCCCceE--EE------EcCCCCCeEEEEEecCCCEEEEEeCCC----cEEEeeeeccCCceeEEEE
Q psy467 123 -------FIKLWDLRRKGCI--YT------YRGHSKSINSIRFSPDGQWIASGGEDG----VVRIGASFHLTNTSIHVVD 183 (845)
Q Consensus 123 -------~I~IWDl~t~~~l--~~------~~~h~~~V~sLafSPdg~~Lasgs~DG----~I~I~~~~~~~~~~I~vWD 183 (845)
.|++||+.+++.. .. +..|...+.+++|+||++++++....+ .|.+ ||
T Consensus 218 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~-------------~d 284 (719)
T 1z68_A 218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSI-------------CD 284 (719)
T ss_dssp TSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEE-------------EE
T ss_pred CCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEE-------------Ec
Confidence 7889999887642 11 235777899999999987776644322 2555 89
Q ss_pred ----CCCCccCCCC------CCCCCc-----ceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 184 ----LSLVHPLGTP------PPQYTS-----SVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 184 ----l~tg~~l~~~------~~~~i~-----svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
+.+++..... +..++. .+.|+|||+.+......... ...+
T Consensus 285 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g----~~~l--------------------- 339 (719)
T 1z68_A 285 FREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG----YKHI--------------------- 339 (719)
T ss_dssp ECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS----CEEE---------------------
T ss_pred ccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCC----ceEE---------------------
Confidence 7776654433 234444 78899999976654332222 1112
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC-----CCeEEEEECCC--Ce-EEEEec-
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA-----DRTVNFWDLEK--FS-LVSTTE- 319 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~-----DG~I~IWDl~s--~~-~l~tl~- 319 (845)
..+..++.. ..........+..+.++ +++ .++..+. ++.+++|.+.. +. ....+.
T Consensus 340 --------~~~~~~~~~--~~~lt~~~~~v~~~~~~-d~~-----~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~ 403 (719)
T 1z68_A 340 --------HYIKDTVEN--AIQITSGKWEAINIFRV-TQD-----SLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTC 403 (719)
T ss_dssp --------EEESSCSTT--CEECSCSSSCEEEEEEE-CSS-----EEEEEESCGGGCTTCBEEEEEECSSSSCCEEESST
T ss_pred --------EEEECCCCc--eEecccCceEEEEEEEE-eCC-----EEEEEEecCCCCCceEEEEEEeCCCCCCCceeccC
Confidence 112221110 00011112335556666 666 4544444 47788887653 42 123333
Q ss_pred ---CCCCCEEEEEEeCCCCEEEE-EeCCC---EEEEEecCCceEEEec
Q psy467 320 ---KNSSTIRRLTFSEGGECLLG-GDTEG---LKVYGWEPARQYDAQP 360 (845)
Q Consensus 320 ---gh~~~VtslafSpdG~~Las-gs~DG---I~IWDl~tgk~l~tl~ 360 (845)
+|...+..+.|+|+|++++. ++... +.+||+.+++++..+.
T Consensus 404 ~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~~~~~ 451 (719)
T 1z68_A 404 HLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKILE 451 (719)
T ss_dssp TTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCEEEEEE
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCEEEEee
Confidence 25567889999999988774 33332 8999998887665543
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.73 E-value=1.6e-15 Score=162.44 Aligned_cols=256 Identities=11% Similarity=0.068 Sum_probs=180.8
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEEEcCCCC--CeEEEEEccCCCEEE-EEECCCeEEEEECCCCceEEEEcCCC-----
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKS--SITSVDFHPYGDYLC-SGSLDSFIKLWDLRRKGCIYTYRGHS----- 142 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~--~V~~lafspdg~~La-sgs~DG~I~IWDl~t~~~l~~~~~h~----- 142 (845)
++|++++.++.|.+||+.+++.+..+..... .+.+++|+|++++++ +++.++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4789999999999999999998888863322 478999999998765 45567899999999998887765321
Q ss_pred CCeEEEEEecCCCEEEEEe------------CCCcEEEeeeeccCCceeEEEECCCCccCCCCC-CCCCcceeecCCCCe
Q psy467 143 KSINSIRFSPDGQWIASGG------------EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP-PQYTSSVPFSHNTSL 209 (845)
Q Consensus 143 ~~V~sLafSPdg~~Lasgs------------~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~-~~~i~svs~spdg~~ 209 (845)
..+.+++|+|+|+++++++ .++.|.+ ||+.+++...... ...+..++|+|+++.
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v-------------~d~~~~~~~~~~~~~~~~~~~~~s~dg~~ 148 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL-------------YDAETLSRRKAFEAPRQITMLAWARDGSK 148 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE-------------EETTTTEEEEEEECCSSCCCEEECTTSSC
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEE-------------EECCCCcEEEEEeCCCCcceeEECCCCCE
Confidence 2577899999999988886 5678888 9998876644332 445678899999987
Q ss_pred EEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCc
Q psy467 210 RKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPM 289 (845)
Q Consensus 210 l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~ 289 (845)
+.... . .+.++++.... ....+.... ....++|+|++..
T Consensus 149 l~~~~---~-----~i~~~d~~~~~--------------------~~~~~~~~~-------------~~~~~~~s~dg~~ 187 (337)
T 1pby_B 149 LYGLG---R-----DLHVMDPEAGT--------------------LVEDKPIQS-------------WEAETYAQPDVLA 187 (337)
T ss_dssp EEEES---S-----SEEEEETTTTE--------------------EEEEECSTT-------------TTTTTBCCCBCCC
T ss_pred EEEeC---C-----eEEEEECCCCc--------------------Eeeeeeccc-------------cCCCceeCCCccE
Confidence 76541 1 12232221100 000111110 0112367888873
Q ss_pred ccceEEEEEeCCC-----------------------eEEEEECCCCeEE-EEecCCCCCEEEEEEeCCCCEEEEEeCCC-
Q psy467 290 LCFILTTSSSADR-----------------------TVNFWDLEKFSLV-STTEKNSSTIRRLTFSEGGECLLGGDTEG- 344 (845)
Q Consensus 290 ~~~~lLatgs~DG-----------------------~I~IWDl~s~~~l-~tl~gh~~~VtslafSpdG~~Lasgs~DG- 344 (845)
+++++..++ .|.+||+.+++.. ..+..+...+.+++|+|||++|+++ ++
T Consensus 188 ----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~ 261 (337)
T 1pby_B 188 ----VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNV 261 (337)
T ss_dssp ----CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESE
T ss_pred ----EeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCe
Confidence 222222222 4789999998764 2334566678999999999999988 56
Q ss_pred EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 345 LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 345 I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
|.+||+.+++.+..+..+ ..+.+++|+ +|++++++ +.+|...
T Consensus 262 v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 262 LESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp EEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred EEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECc
Confidence 999999999888777643 567899999 89888777 8888654
No 160
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.73 E-value=4.6e-16 Score=169.35 Aligned_cols=252 Identities=13% Similarity=0.160 Sum_probs=162.7
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeC--CCeEEEEECCCCe--eEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEE
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGD--DKKVNLWALGKSN--CIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIW 85 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~--DG~I~IWdl~t~~--~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VW 85 (845)
...+...+..++|+| +|++++++.. ++.|.+|++.+++ .+..+..+...+..++|+|+|++|++++ .++.|.+|
T Consensus 35 ~~~~~~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 35 LLAATQNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp EEEECSCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eeeccCCcceEEEcc-CCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 345667788999999 8884444432 6899999997765 4445455778889999999999998888 67999999
Q ss_pred ECCC-C--cEEEEEcC---------CCCCeEEEEEccCCCEEEEEECCCeEEEEECC-CCceEE--EEcC-CCCCeEEEE
Q psy467 86 NLAV-P--TVQRTLNG---------HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR-RKGCIY--TYRG-HSKSINSIR 149 (845)
Q Consensus 86 Dl~t-g--~~v~~l~~---------h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~-t~~~l~--~~~~-h~~~V~sLa 149 (845)
++.. + ..+..+.. +...+.+++|+|+|+.+++...++.|.+|++. +++... .+.. ....+..++
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE
Confidence 9963 3 33333321 12248899999999966666678899999998 454332 2222 233678899
Q ss_pred EecCCCEEEEE-eCCCcEEEeeeeccCCceeEEEECCC--Ccc-----CCCCC-----CCCCcceeecCCCCeEEEEecC
Q psy467 150 FSPDGQWIASG-GEDGVVRIGASFHLTNTSIHVVDLSL--VHP-----LGTPP-----PQYTSSVPFSHNTSLRKSFTKG 216 (845)
Q Consensus 150 fSPdg~~Lasg-s~DG~I~I~~~~~~~~~~I~vWDl~t--g~~-----l~~~~-----~~~i~svs~spdg~~l~~~~~h 216 (845)
|+|||++++++ ..++.+.+ |++.. ++. +.... ......++|+|+|+.+......
T Consensus 194 ~spdg~~l~v~~~~~~~v~v-------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~ 260 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIAS-------------LKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG 260 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEE-------------EEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET
T ss_pred ECCCCCEEEEEeCCCCEEEE-------------EEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC
Confidence 99999976664 56788888 76653 321 11111 1346679999999977554332
Q ss_pred CCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE
Q psy467 217 RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT 296 (845)
Q Consensus 217 ~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa 296 (845)
.. .+.++++..... . ..+...+. ....+..++|+|||+ +|+
T Consensus 261 ~~-----~v~v~~~~~~g~-------~-----------~~~~~~~~-----------~~~~~~~~~~spdg~-----~l~ 301 (347)
T 3hfq_A 261 YN-----TLAVFAVTADGH-------L-----------TLIQQIST-----------EGDFPRDFDLDPTEA-----FVV 301 (347)
T ss_dssp TT-----EEEEEEECGGGC-------E-----------EEEEEEEC-----------SSSCCCEEEECTTSS-----EEE
T ss_pred CC-----EEEEEEECCCCc-------E-----------EEeEEEec-----------CCCCcCeEEECCCCC-----EEE
Confidence 22 233433321000 0 11111111 112457888999998 677
Q ss_pred EEeC-CCeEEEE--ECCCCeEE
Q psy467 297 SSSA-DRTVNFW--DLEKFSLV 315 (845)
Q Consensus 297 tgs~-DG~I~IW--Dl~s~~~l 315 (845)
+++. ++.|.+| |..+++..
T Consensus 302 v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 302 VVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEETTTTEEEEEEECTTTCCEE
T ss_pred EEEcCCCcEEEEEEeCCCCeEE
Confidence 6665 5899999 55666654
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.73 E-value=1.1e-15 Score=168.97 Aligned_cols=258 Identities=12% Similarity=0.143 Sum_probs=171.5
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECC-CCeeEEEecC-CCCCeEEEEEcCCCCE--EEEEE------------
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALG-KSNCIMSLSG-HSTPVESVQFGNGEET--LSAGC------------ 77 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~-t~~~i~~l~~-h~~~V~sLafSpdg~~--LaSgs------------ 77 (845)
+...+..++|+| +|++|++++.+ .|.+|++. +++....... ..+.+.+++|+|+|++ ++++.
T Consensus 38 ~~~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 38 QDEPISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TTCCCSEEEECT-TSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCCcEEEECC-CCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 445788999999 99999999888 99999997 7776543321 1123567899999994 44543
Q ss_pred -CCCcEEEEECC-CCcEEEEEc----CCCCCeEEEEEccCCCEEEEEEC-CCeEEEEECC-CCceE--EEEc--CCCCCe
Q psy467 78 -QSGSIKIWNLA-VPTVQRTLN----GHKSSITSVDFHPYGDYLCSGSL-DSFIKLWDLR-RKGCI--YTYR--GHSKSI 145 (845)
Q Consensus 78 -~DGtV~VWDl~-tg~~v~~l~----~h~~~V~~lafspdg~~Lasgs~-DG~I~IWDl~-t~~~l--~~~~--~h~~~V 145 (845)
.+|.+.+|++. +++....+. .+...+.+++|+|||+++++++. ++.|.+||+. +++.. ..+. .+...+
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCE
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCC
Confidence 68999999997 466554443 24567999999999998887764 6799999998 67643 3333 235679
Q ss_pred EEEEEecCCCEEEEEeC-CCcEEEeeeeccCCceeEEEECC--CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcc
Q psy467 146 NSIRFSPDGQWIASGGE-DGVVRIGASFHLTNTSIHVVDLS--LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTK 222 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~-DG~I~I~~~~~~~~~~I~vWDl~--tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~ 222 (845)
..++|+|||+++++++. ++.+.+ |++. +++. ......
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v-------------~~~~~~~g~~--------------------~~~~~~------- 235 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICE-------------YVIDPATHMP--------------------VYTHHS------- 235 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEE-------------EEECTTTCCE--------------------EEEEEE-------
T ss_pred CEeEECCCCCEEEEEECCCCeEEE-------------EEEeCCCCcE--------------------EEccce-------
Confidence 99999999999888775 678888 7764 3332 110000
Q ss_pred ceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEE-EcCCCCcccceEEEEEeC-
Q psy467 223 AKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLS-ILPQSPMLCFILTTSSSA- 300 (845)
Q Consensus 223 ~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~sla-fSPdg~~~~~~lLatgs~- 300 (845)
+ ...|.+....... ......+..++ |+|||+ +|++++.
T Consensus 236 ----~------------------------------~~~~~~~~g~~~~-~~~~~~~~~i~~~spdG~-----~l~v~~~~ 275 (365)
T 1jof_A 236 ----F------------------------------PLIPPGIPDRDPE-TGKGLYRADVCALTFSGK-----YMFASSRA 275 (365)
T ss_dssp ----E------------------------------ESSCTTCCCBCTT-TSSBSEEEEEEEECTTSS-----EEEEEEEE
T ss_pred ----E------------------------------EcCCCCcCCcccc-cccccccccEEEECCCCC-----EEEEECCC
Confidence 0 0000000000000 00001245566 677776 6655543
Q ss_pred CC-----eEEEEECC-CCeEEE---EecCCCCCEEEEEEeC---CCCEEEEEeCC-C-EEEEEecCC
Q psy467 301 DR-----TVNFWDLE-KFSLVS---TTEKNSSTIRRLTFSE---GGECLLGGDTE-G-LKVYGWEPA 353 (845)
Q Consensus 301 DG-----~I~IWDl~-s~~~l~---tl~gh~~~VtslafSp---dG~~Lasgs~D-G-I~IWDl~tg 353 (845)
++ .|.+|++. +++... ....+...+..++|+| ||++|++++.+ + |.+|+++..
T Consensus 276 ~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 276 NKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 22 89999986 566543 2333455677899999 89999999875 5 999999876
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.73 E-value=2.5e-16 Score=187.16 Aligned_cols=290 Identities=10% Similarity=0.015 Sum_probs=194.4
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEE--eCCCeEEEEECCCCeeEEEecCCCCCeE---------EEEEc--CCCCE-EE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATG--GDDKKVNLWALGKSNCIMSLSGHSTPVE---------SVQFG--NGEET-LS 74 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTg--s~DG~I~IWdl~t~~~i~~l~~h~~~V~---------sLafS--pdg~~-La 74 (845)
+.+.+|...|..++|++ ++-+++.. +.++...||....+.....+..|...+. ...|+ |||+. |+
T Consensus 17 ~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 17 ALVASRSGRPACVGAVG-DEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHHHTCSCCEEEEEET-TEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HHHhhcCCccceeEEcC-CeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 45778999999999998 66566666 5578999999655566777877777766 66676 99998 77
Q ss_pred EEEC-CCcEEEEECC--C-CcEEEEEcC-----CCCCeEEEEEccCCCEEEEEECC----------CeEEEEECCC----
Q psy467 75 AGCQ-SGSIKIWNLA--V-PTVQRTLNG-----HKSSITSVDFHPYGDYLCSGSLD----------SFIKLWDLRR---- 131 (845)
Q Consensus 75 Sgs~-DGtV~VWDl~--t-g~~v~~l~~-----h~~~V~~lafspdg~~Lasgs~D----------G~I~IWDl~t---- 131 (845)
.++. +..|.+|++. . +. ...+.. |...+.+++|+|||+.|++++.+ ..|++||+.+
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred EEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 6654 5667777765 2 43 445554 56678899999999999988876 5899999987
Q ss_pred --CceEEEEc-CCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECC-CCccCCCCCCCCCcceeecCCC
Q psy467 132 --KGCIYTYR-GHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLS-LVHPLGTPPPQYTSSVPFSHNT 207 (845)
Q Consensus 132 --~~~l~~~~-~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~-tg~~l~~~~~~~i~svs~spdg 207 (845)
+.. ..+. .+...+..++|||||++|+.++.++... ......|++||+. ++...
T Consensus 175 ~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~-----~~~~~~i~~~d~~~~g~~~----------------- 231 (662)
T 3azo_A 175 DRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRM-----PWEGTELKTARVTEDGRFA----------------- 231 (662)
T ss_dssp CGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCC-----TTTCEEEEEEEECTTSCEE-----------------
T ss_pred cCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCC-----CCCCcEEEEEEECCCCccc-----------------
Confidence 444 4555 5566788899999999999887553100 0011123338887 45210
Q ss_pred CeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCC
Q psy467 208 SLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQS 287 (845)
Q Consensus 208 ~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg 287 (845)
.......++... + ..+.|+|+ |
T Consensus 232 ~~~~l~~~~~~~-------~---------------------------~~~~~spd------------------------g 253 (662)
T 3azo_A 232 DTRTLLGGPEEA-------I---------------------------AQAEWAPD------------------------G 253 (662)
T ss_dssp EEEEEEEETTBC-------E---------------------------EEEEECTT------------------------S
T ss_pred ccEEeCCCCCce-------E---------------------------cceEECCC------------------------C
Confidence 001111111111 2 34444544 4
Q ss_pred CcccceEEEEEeCCC--eEEEEECCCCeEEEEecCCCCC--------EEEEEEeCCCCEEEEEeCCC-EEEEEecC-Cce
Q psy467 288 PMLCFILTTSSSADR--TVNFWDLEKFSLVSTTEKNSST--------IRRLTFSEGGECLLGGDTEG-LKVYGWEP-ARQ 355 (845)
Q Consensus 288 ~~~~~~lLatgs~DG--~I~IWDl~s~~~l~tl~gh~~~--------VtslafSpdG~~Lasgs~DG-I~IWDl~t-gk~ 355 (845)
+ +++++..++ .|++||+.+++.......+... +.+++|+++++++++++. + ++||.++. +..
T Consensus 254 ~-----l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 254 S-----LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp C-----EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred e-----EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence 4 788888888 6777787777765444433222 567899999999999998 8 88885542 234
Q ss_pred EEEecCCCCCeEEE-EEcCCceEEEE------EEEEeeC
Q psy467 356 YDAQPMGWGKVQDL-AVTGTQLWFRR------VGTWSHQ 387 (845)
Q Consensus 356 l~tl~~h~~~VtsV-afSdg~lLaaS------VsiW~~d 387 (845)
+..+..|...+..+ +++++.+++++ ..+|..+
T Consensus 328 ~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 328 LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEE
T ss_pred EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEE
Confidence 67788888888877 66555555444 5677655
No 163
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.72 E-value=8.5e-17 Score=183.29 Aligned_cols=210 Identities=12% Similarity=0.061 Sum_probs=155.5
Q ss_pred CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC----------cEE------EEEcCCCC
Q psy467 38 KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP----------TVQ------RTLNGHKS 101 (845)
Q Consensus 38 G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg----------~~v------~~l~~h~~ 101 (845)
+.+++|+.... .+...++.+++++++.++++++.++ +++|+.... ..+ ..+ .+..
T Consensus 23 ~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 93 (434)
T 2oit_A 23 KKVRIFDSPEE-------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKF 93 (434)
T ss_dssp CEEECSCCCSS-------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSS
T ss_pred eeEEecCCccc-------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCC
Confidence 46888865311 1345689999999999999998887 888875311 111 122 2566
Q ss_pred CeEEEEEccCCCEEE----EEECCCeEEEEECCCC--------ce---EEEEcCCCCCeEEEEEecC-CCEEEEEeCCCc
Q psy467 102 SITSVDFHPYGDYLC----SGSLDSFIKLWDLRRK--------GC---IYTYRGHSKSINSIRFSPD-GQWIASGGEDGV 165 (845)
Q Consensus 102 ~V~~lafspdg~~La----sgs~DG~I~IWDl~t~--------~~---l~~~~~h~~~V~sLafSPd-g~~Lasgs~DG~ 165 (845)
.|.+++|+|++++|+ +|+.|+.|++||+.++ +. +..+.+|...|.+++|+|+ +++|++++.||.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 799999999999999 7888999999998654 22 4555678999999999997 889999999999
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhh
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
|++ ||++++.. +....+|... +
T Consensus 174 v~i-------------wD~~~~~~--------------------~~~~~~~~~~-------v------------------ 195 (434)
T 2oit_A 174 IAV-------------LQVTETVK--------------------VCATLPSTVA-------V------------------ 195 (434)
T ss_dssp EEE-------------EEESSSEE--------------------EEEEECGGGC-------E------------------
T ss_pred EEE-------------EEcCCCcc--------------------eeeccCCCCc-------e------------------
Confidence 999 99987654 3333333333 3
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC---
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS--- 322 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~--- 322 (845)
.+++|+|++. +|++|+.||.|++||++ ++....+..|.
T Consensus 196 ---------~~v~wspdg~-----------------------------~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~ 236 (434)
T 2oit_A 196 ---------TSVCWSPKGK-----------------------------QLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYE 236 (434)
T ss_dssp ---------EEEEECTTSS-----------------------------CEEEEETTSCEEEECTT-CCEEEEECCCTTCC
T ss_pred ---------eEEEEcCCCC-----------------------------EEEEEcCCCcEEEEccC-CcccccccCCcccC
Confidence 4455555554 89999999999999998 66666665442
Q ss_pred ----CCEEEEEEeCCCCEEEEEe-CC------C-EEEEEecCC
Q psy467 323 ----STIRRLTFSEGGECLLGGD-TE------G-LKVYGWEPA 353 (845)
Q Consensus 323 ----~~VtslafSpdG~~Lasgs-~D------G-I~IWDl~tg 353 (845)
..|.+++|++++.++++.+ .+ . +++|++...
T Consensus 237 ~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 237 SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 3799999999998886543 22 1 889999764
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.72 E-value=2.6e-15 Score=165.89 Aligned_cols=270 Identities=8% Similarity=0.055 Sum_probs=175.9
Q ss_pred EEEEEeCC--CeEEEEEC--CCCeeEE--Eec-CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC-CCcEEEEEcC-CC
Q psy467 30 VLATGGDD--KKVNLWAL--GKSNCIM--SLS-GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA-VPTVQRTLNG-HK 100 (845)
Q Consensus 30 ~LaTgs~D--G~I~IWdl--~t~~~i~--~l~-~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~-tg~~v~~l~~-h~ 100 (845)
.+++|+.. +.|.+|++ .+++... ... .....+..++|+|++++|++++.+ .|.+|++. +++....... ..
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 35566543 56877765 4555432 221 234568899999999999998887 99999997 7776543321 11
Q ss_pred CCeEEEEEccCCCE--EEEEE-------------CCCeEEEEECC-CCceEEEEc----CCCCCeEEEEEecCCCEEEEE
Q psy467 101 SSITSVDFHPYGDY--LCSGS-------------LDSFIKLWDLR-RKGCIYTYR----GHSKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 101 ~~V~~lafspdg~~--Lasgs-------------~DG~I~IWDl~-t~~~l~~~~----~h~~~V~sLafSPdg~~Lasg 160 (845)
+...+++|+|+|++ +++++ .+|.+.+|++. +++....+. .+...+.+++|+|||++++++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 23567899999984 44543 68999999997 465544333 245679999999999988877
Q ss_pred eC-CCcEEEeeeeccCCceeEEEECC-CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccc
Q psy467 161 GE-DGVVRIGASFHLTNTSIHVVDLS-LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238 (845)
Q Consensus 161 s~-DG~I~I~~~~~~~~~~I~vWDl~-tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~ 238 (845)
+. ++.|.+ ||+. +++.. .+..+...
T Consensus 163 ~~~~~~v~~-------------~~~~~~g~~~------------------~~~~~~~~---------------------- 189 (365)
T 1jof_A 163 DLTANKLWT-------------HRKLASGEVE------------------LVGSVDAP---------------------- 189 (365)
T ss_dssp ETTTTEEEE-------------EEECTTSCEE------------------EEEEEECS----------------------
T ss_pred cCCCCEEEE-------------EEECCCCCEE------------------EeeeEecC----------------------
Confidence 64 578888 9987 45430 01111100
Q ss_pred cccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECC--CCeEE
Q psy467 239 QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLE--KFSLV 315 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~--s~~~l 315 (845)
..+ ..+..++|+|||+ ++++++ .++.|.+|++. +++..
T Consensus 190 ----------------------~~g------------~~p~~~~~spdg~-----~l~v~~~~~~~v~v~~~~~~~g~~~ 230 (365)
T 1jof_A 190 ----------------------DPG------------DHPRWVAMHPTGN-----YLYALMEAGNRICEYVIDPATHMPV 230 (365)
T ss_dssp ----------------------STT------------CCEEEEEECTTSS-----EEEEEETTTTEEEEEEECTTTCCEE
T ss_pred ----------------------CCC------------CCCCEeEECCCCC-----EEEEEECCCCeEEEEEEeCCCCcEE
Confidence 000 1234455555555 666665 47899999765 56542
Q ss_pred ---EEec---C----CCC------CEEEEE-EeCCCCEEEEEeC--C-----CEEEEEec-CCceEE---EecCCCCCeE
Q psy467 316 ---STTE---K----NSS------TIRRLT-FSEGGECLLGGDT--E-----GLKVYGWE-PARQYD---AQPMGWGKVQ 367 (845)
Q Consensus 316 ---~tl~---g----h~~------~Vtsla-fSpdG~~Lasgs~--D-----GI~IWDl~-tgk~l~---tl~~h~~~Vt 367 (845)
..+. . |.. .+..++ |+|||++|++++. + .|.+|+++ +++... ....+...+.
T Consensus 231 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~ 310 (365)
T 1jof_A 231 YTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGH 310 (365)
T ss_dssp EEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTT
T ss_pred EccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcc
Confidence 2222 1 122 588999 9999999887653 3 39999996 566543 2334555677
Q ss_pred EEEEcC----CceEEEE------EEEEeeCCCCCc
Q psy467 368 DLAVTG----TQLWFRR------VGTWSHQDSGFS 392 (845)
Q Consensus 368 sVafSd----g~lLaaS------VsiW~~d~~~~~ 392 (845)
.++|++ |++|+++ |.+|..+...+.
T Consensus 311 ~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l~ 345 (365)
T 1jof_A 311 SNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLH 345 (365)
T ss_dssp CCCEEECTTCTTEEEEECSSSCEEEEEEEETTEEE
T ss_pred cceecCCCcCCCEEEEEEcCCCeEEEEEEchhhCc
Confidence 888883 8888887 899988766443
No 165
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.71 E-value=2.2e-16 Score=173.67 Aligned_cols=285 Identities=11% Similarity=0.025 Sum_probs=180.9
Q ss_pred eEEeccCCCc-----EEEEEEecCCCCEEEEEeCC---CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC
Q psy467 8 AEDFMAHGAS-----VNCLALGKKSGQVLATGGDD---KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS 79 (845)
Q Consensus 8 l~~L~gH~~~-----V~~LafSp~dg~~LaTgs~D---G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D 79 (845)
++.+..+... +.+++|+| +|++|+..... ..|.+|++.+++......++......+.|+|||++|+.++.+
T Consensus 23 ~~~l~~~~~~~~~~~~~~~~~Sp-dG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~ 101 (396)
T 3c5m_A 23 VTRLTPTDIICHRNYFYQKCFTQ-DGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE 101 (396)
T ss_dssp EEECSCTTSCEECCCTTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT
T ss_pred eEEEecCCCCccceeeecCcCCC-CCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC
Confidence 4556655444 78899999 89988877543 478889998887654434333333347899999999999999
Q ss_pred CcEEEEECCCCcEEEEEcCCCCCeEE-------------------EEEccCCCEEEEE-----ECCCeEEEEECCCCceE
Q psy467 80 GSIKIWNLAVPTVQRTLNGHKSSITS-------------------VDFHPYGDYLCSG-----SLDSFIKLWDLRRKGCI 135 (845)
Q Consensus 80 GtV~VWDl~tg~~v~~l~~h~~~V~~-------------------lafspdg~~Lasg-----s~DG~I~IWDl~t~~~l 135 (845)
+.|.+||+.+++.......+...... +.|+|+++.++.+ ..+..|.+||+.+++..
T Consensus 102 ~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 181 (396)
T 3c5m_A 102 LNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELE 181 (396)
T ss_dssp TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEE
T ss_pred CcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEE
Confidence 99999999988766655544432222 3456777766543 35668999999887765
Q ss_pred EEEcCCCCCeEEEEEec-CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEe
Q psy467 136 YTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFT 214 (845)
Q Consensus 136 ~~~~~h~~~V~sLafSP-dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~ 214 (845)
... .+...+..+.|+| +++.|+.++.++. ......+++||+..+.. . .+.
T Consensus 182 ~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~-------~~~~~~l~~~d~~~~~~--------------------~-~l~ 232 (396)
T 3c5m_A 182 VIH-QDTAWLGHPIYRPFDDSTVGFCHEGPH-------DLVDARMWLVNEDGSNV--------------------R-KIK 232 (396)
T ss_dssp EEE-EESSCEEEEEEETTEEEEEEEEECSCS-------SSCSCCCEEEETTSCCC--------------------E-ESS
T ss_pred eec-cCCcccccceECCCCCCEEEEEecCCC-------CCCCceEEEEECCCCce--------------------e-Eee
Confidence 544 4567789999999 7887777654321 00001223377754432 1 110
Q ss_pred cCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceE
Q psy467 215 KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFIL 294 (845)
Q Consensus 215 ~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~l 294 (845)
.+... ..+..++|+|||+ .
T Consensus 233 ~~~~~--------------------------------------------------------~~~~~~~~spdg~-----~ 251 (396)
T 3c5m_A 233 EHAEG--------------------------------------------------------ESCTHEFWIPDGS-----A 251 (396)
T ss_dssp CCCTT--------------------------------------------------------EEEEEEEECTTSS-----C
T ss_pred ccCCC--------------------------------------------------------ccccceEECCCCC-----E
Confidence 00000 0122344444444 5
Q ss_pred EEEEeCC-----CeEEEEECCCCeEEEEecCCCCCEEEEEEeC-CCCEEEEEe----------------CCC-EEEEEec
Q psy467 295 TTSSSAD-----RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE-GGECLLGGD----------------TEG-LKVYGWE 351 (845)
Q Consensus 295 Latgs~D-----G~I~IWDl~s~~~l~tl~gh~~~VtslafSp-dG~~Lasgs----------------~DG-I~IWDl~ 351 (845)
|+.++.+ +.|++||+.+++....... . ... +.|+| ||+++++++ .+. |.+||+.
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 252 MAYVSYFKGQTDRVIYKANPETLENEEVMVM-P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp EEEEEEETTTCCEEEEEECTTTCCEEEEEEC-C-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred EEEEecCCCCccceEEEEECCCCCeEEeeeC-C-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 5555433 4599999998865443322 1 233 89999 999888764 234 9999998
Q ss_pred CCceEEEecCCCC-----------CeEEEEEc-CCceEEEE------EEEEeeC
Q psy467 352 PARQYDAQPMGWG-----------KVQDLAVT-GTQLWFRR------VGTWSHQ 387 (845)
Q Consensus 352 tgk~l~tl~~h~~-----------~VtsVafS-dg~lLaaS------VsiW~~d 387 (845)
+++.. .+..+.. .+..++|+ ||+.|+.. ..+|.++
T Consensus 329 ~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 329 AKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp TTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 87643 3444443 26678999 88877655 4566544
No 166
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.71 E-value=1.6e-15 Score=163.52 Aligned_cols=271 Identities=14% Similarity=0.038 Sum_probs=172.3
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCC-CCeEEEEEccCCCEEEE-EECCCeEEEEECCCCceEEEEcC
Q psy467 63 SVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK-SSITSVDFHPYGDYLCS-GSLDSFIKLWDLRRKGCIYTYRG 140 (845)
Q Consensus 63 sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~-~~V~~lafspdg~~Las-gs~DG~I~IWDl~t~~~l~~~~~ 140 (845)
.+++++++.++++++.++.|.+||+.+++.+..+..+. ..+..++|+|+++++++ +..++.|.+||+.+++.+..+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45678888999999999999999999999888887443 25789999999987654 45689999999999988877763
Q ss_pred CC------CCeEEEEEecCCCEEEEEeCC------------CcEEEeeeeccCCceeEEEECCCCccCCCC----CCCCC
Q psy467 141 HS------KSINSIRFSPDGQWIASGGED------------GVVRIGASFHLTNTSIHVVDLSLVHPLGTP----PPQYT 198 (845)
Q Consensus 141 h~------~~V~sLafSPdg~~Lasgs~D------------G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~----~~~~i 198 (845)
.. ..+.+++|+|||+++++++.+ +.|.+ ||+.+++..... .+..+
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~-------------~d~~~~~~~~~~~~~~~~~~~ 150 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEV-------------FSTADGLEAKPVRTFPMPRQV 150 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE-------------EEGGGGGGBCCSEEEECCSSC
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEE-------------EECCCccccceeeeccCCCcc
Confidence 32 237889999999999998865 67777 999875543322 13456
Q ss_pred cceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCc
Q psy467 199 SSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSR 278 (845)
Q Consensus 199 ~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I 278 (845)
..++|+|+|+ +... +. . +.++++.... ....+ +.+.+... .....
T Consensus 151 ~~~~~s~dg~-l~~~-~~--~-----i~~~d~~~~~--------------------~~~~~-~~~~~~~~-----~~~~~ 195 (349)
T 1jmx_B 151 YLMRAADDGS-LYVA-GP--D-----IYKMDVKTGK--------------------YTVAL-PLRNWNRK-----GYSAP 195 (349)
T ss_dssp CCEEECTTSC-EEEE-SS--S-----EEEECTTTCC--------------------EEEEE-CSTTCCCT-----TBCCC
T ss_pred cceeECCCCc-EEEc-cC--c-----EEEEeCCCCc--------------------eeccc-cccccCCc-----cccCc
Confidence 7788999998 4332 11 1 2222111100 00011 11100000 00000
Q ss_pred eeE-EEcCCCCcccceEEE-----EEeCC-----------CeEEEEECCCCeE-EEEecCCCCCEEEEEEeC-CCCEEEE
Q psy467 279 TSL-SILPQSPMLCFILTT-----SSSAD-----------RTVNFWDLEKFSL-VSTTEKNSSTIRRLTFSE-GGECLLG 339 (845)
Q Consensus 279 ~sl-afSPdg~~~~~~lLa-----tgs~D-----------G~I~IWDl~s~~~-l~tl~gh~~~VtslafSp-dG~~Las 339 (845)
..+ .|...+... .+. .-+.| ..+..+|..+++. ...+..+...+.+++|+| +|++|++
T Consensus 196 ~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~ 272 (349)
T 1jmx_B 196 DVLYFWPHQSPRH---EFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYG 272 (349)
T ss_dssp BCCCCCCCCCTTC---EEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEE
T ss_pred cceeeecCCCcce---eEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEE
Confidence 111 222222110 111 11111 1222356665543 222334556789999999 9999998
Q ss_pred EeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE-----EEEEeeC
Q psy467 340 GDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR-----VGTWSHQ 387 (845)
Q Consensus 340 gs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS-----VsiW~~d 387 (845)
+ ++ |.+||+.+++.+..+..+ ..+.+++|+ +|++|+++ +.+|..+
T Consensus 273 ~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 273 V--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp E--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred E--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEecc
Confidence 8 66 999999999888777643 457899999 88877776 7888654
No 167
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.71 E-value=7.4e-16 Score=180.76 Aligned_cols=254 Identities=12% Similarity=0.035 Sum_probs=173.3
Q ss_pred ceeeee-----EEeccCC-CcEEEEEEecCCCCEEEEEeC---CCeEEEEECCC---CeeEEEecCCCCCeEEEEEcCCC
Q psy467 3 AKVEKA-----EDFMAHG-ASVNCLALGKKSGQVLATGGD---DKKVNLWALGK---SNCIMSLSGHSTPVESVQFGNGE 70 (845)
Q Consensus 3 irlw~l-----~~L~gH~-~~V~~LafSp~dg~~LaTgs~---DG~I~IWdl~t---~~~i~~l~~h~~~V~sLafSpdg 70 (845)
+++|.+ +.+..|. ..|.+++|+| + +++++++. +....||.+.. +... .+..+ ..+...+|+|++
T Consensus 46 ~~lw~~~~g~~~~lt~~~~~~~~~~~~sp-d-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg 121 (582)
T 3o4h_A 46 VNAYLYDGGETVKLNREPINSVLDPHYGV-G-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTG 121 (582)
T ss_dssp EEEEEEETTEEEECCSSCCSEECEECTTC-S-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEECS
T ss_pred eeEEEEcCCCcEeeecccccccccccCCC-C-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCC-CCceeeeeCCCC
Confidence 456764 4566676 6899999999 6 77777765 45556655432 3333 44422 245577888888
Q ss_pred CE-EEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC----CeEEEEECCCCceEEEEcCCCCCe
Q psy467 71 ET-LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD----SFIKLWDLRRKGCIYTYRGHSKSI 145 (845)
Q Consensus 71 ~~-LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D----G~I~IWDl~t~~~l~~~~~h~~~V 145 (845)
+. +++.+.++.+.+||+.+++.......+ . .+++|+|||++|++++.+ +.|++||+.+++.. .+..+...+
T Consensus 122 ~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~ 197 (582)
T 3o4h_A 122 EAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSF 197 (582)
T ss_dssp SCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEE
T ss_pred CeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCcc
Confidence 63 333344555669999988766555433 2 789999999999988777 78999999887754 667788889
Q ss_pred EEEEEecCCCEEEEEeCCC--cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccc
Q psy467 146 NSIRFSPDGQWIASGGEDG--VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKA 223 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG--~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~ 223 (845)
..++|+|||++|+++..++ .|++ ||+.+++. . .+.++...
T Consensus 198 ~~~~~SpDG~~l~~~~~~~~~~i~~-------------~d~~~~~~--------------------~-~~~~~~~~---- 239 (582)
T 3o4h_A 198 SSASISPGMKVTAGLETAREARLVT-------------VDPRDGSV--------------------E-DLELPSKD---- 239 (582)
T ss_dssp EEEEECTTSCEEEEEECSSCEEEEE-------------ECTTTCCE--------------------E-ECCCSCSH----
T ss_pred ccceECCCCCEEEEccCCCeeEEEE-------------EcCCCCcE--------------------E-EccCCCcC----
Confidence 9999999999999888888 6777 99987776 3 22222221
Q ss_pred eeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCe
Q psy467 224 KIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRT 303 (845)
Q Consensus 224 ~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~ 303 (845)
+ ..+. + ......+|+|||. ++++++.|+.
T Consensus 240 ---~---------------------------~~~~----~------------~~~~~~~~spdg~-----~~~~~~~~g~ 268 (582)
T 3o4h_A 240 ---F---------------------------SSYR----P------------TAITWLGYLPDGR-----LAVVARREGR 268 (582)
T ss_dssp ---H---------------------------HHHC----C------------SEEEEEEECTTSC-----EEEEEEETTE
T ss_pred ---h---------------------------hhhh----h------------ccccceeEcCCCc-----EEEEEEcCCc
Confidence 1 0111 0 0011233555554 8999999999
Q ss_pred EEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC--EEEEEecCCceEEEe
Q psy467 304 VNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG--LKVYGWEPARQYDAQ 359 (845)
Q Consensus 304 I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG--I~IWDl~tgk~l~tl 359 (845)
+++|++ ++.+. .+.+.|.+++|+ +|+++++++.+. -.+|.++....+..+
T Consensus 269 ~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~~~~~l 320 (582)
T 3o4h_A 269 SAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGEPLLEG 320 (582)
T ss_dssp EEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEECC
T ss_pred EEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCCceEEE
Confidence 999999 66554 334679999999 999999888776 455555433233333
No 168
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=1.3e-14 Score=157.38 Aligned_cols=263 Identities=9% Similarity=0.066 Sum_probs=175.1
Q ss_pred eeeeeEEeccCCCcEEEEEEecCCCCEEEEEe---------CCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEE
Q psy467 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGG---------DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS 74 (845)
Q Consensus 4 rlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs---------~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~La 74 (845)
+...+..+.. -..+..+++ +|+.++... .++.|.+|++.+++... + ..+..++|+|||++|+
T Consensus 4 ~~~~~~~l~~-~~~~~~~~~---dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la 74 (347)
T 2gop_A 4 IEWNEKTFAK-FAYLSDPRT---KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIA 74 (347)
T ss_dssp ------CCCC-SCEEEEEEE---ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEE
T ss_pred ccCCccccee-eEEcccceE---CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEE
Confidence 3344444443 345778888 577776542 25679999998876543 3 4688999999999999
Q ss_pred EEECC---C--cEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC---------------------------C
Q psy467 75 AGCQS---G--SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD---------------------------S 122 (845)
Q Consensus 75 Sgs~D---G--tV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D---------------------------G 122 (845)
.++.+ + .|.+|++.+++.......+ . +..++|+|||+.|+.++.+ .
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 152 (347)
T 2gop_A 75 FMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKT 152 (347)
T ss_dssp EEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEE
T ss_pred EEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccc
Confidence 87754 3 4888899888766555433 3 9999999999998887642 5
Q ss_pred eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCC-------cEEEeeeeccCCceeEEEECCCCccCCCCCC
Q psy467 123 FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG-------VVRIGASFHLTNTSIHVVDLSLVHPLGTPPP 195 (845)
Q Consensus 123 ~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG-------~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~ 195 (845)
.|.+||+.+++.+..+.. . .+..++|+||| +++++..++ ...+ +.+| +++.
T Consensus 153 ~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l-----------~~~d--~~~~------ 210 (347)
T 2gop_A 153 TFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDI-----------YIWE--DGKE------ 210 (347)
T ss_dssp EEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEE-----------EEEE--TTEE------
T ss_pred eEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccE-----------EEeC--CCce------
Confidence 799999988876455554 3 78899999999 777775542 2233 2244 2222
Q ss_pred CCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccc
Q psy467 196 QYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVS 275 (845)
Q Consensus 196 ~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~ 275 (845)
..+..+ .. + . .++|+|+
T Consensus 211 ---------------~~l~~~-~~-------~---------------------------~--~~spdg~----------- 227 (347)
T 2gop_A 211 ---------------EKMFEK-VS-------F---------------------------Y--AVDSDGE----------- 227 (347)
T ss_dssp ---------------EEEEEE-ES-------E---------------------------E--EEEECSS-----------
T ss_pred ---------------EEeccC-cc-------e---------------------------e--eECCCCC-----------
Confidence 111111 11 1 1 1255555
Q ss_pred cCceeEEEcCCCCcccceEEEEEeCC--------CeEEEEECCCCeEEEEecCCCCCEEE-EEEeCCCCEEEEEeCCC-E
Q psy467 276 VSRTSLSILPQSPMLCFILTTSSSAD--------RTVNFWDLEKFSLVSTTEKNSSTIRR-LTFSEGGECLLGGDTEG-L 345 (845)
Q Consensus 276 ~~I~slafSPdg~~~~~~lLatgs~D--------G~I~IWDl~s~~~l~tl~gh~~~Vts-lafSpdG~~Lasgs~DG-I 345 (845)
.|+.++.+ ..|.+|| +++......+|...+.. +.|+ || ++++++.++ +
T Consensus 228 ------------------~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~ 285 (347)
T 2gop_A 228 ------------------RILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSV 285 (347)
T ss_dssp ------------------CEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEE
T ss_pred ------------------EEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcE
Confidence 56555533 4788888 56655555566778886 9999 88 888999999 9
Q ss_pred EEEEecCCceEEEecCCCCCeEEEEEcCCceEEEE------EEEEeeC
Q psy467 346 KVYGWEPARQYDAQPMGWGKVQDLAVTGTQLWFRR------VGTWSHQ 387 (845)
Q Consensus 346 ~IWDl~tgk~l~tl~~h~~~VtsVafSdg~lLaaS------VsiW~~d 387 (845)
+|| +.+++.. .+..+.+.|.+++|++ ++++++ ..+|..+
T Consensus 286 ~l~-~~~g~~~-~~~~~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 286 NLY-IWDGEIK-PIAKGRHWIMGFDVDE-IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEE-EESSSEE-EEECSSSEEEEEEESS-SEEEEEECSSSCCEEEEES
T ss_pred EEE-EcCCceE-EEecCCCeEEeeeeeC-cEEEEEcCCCChHHheEeC
Confidence 999 8866654 4444577899999999 666555 3678766
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.68 E-value=1.5e-14 Score=157.71 Aligned_cols=249 Identities=11% Similarity=0.099 Sum_probs=182.8
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCC------------------------CeEEEEECCCCeeEEEec-CCCCCeEEEEEcC
Q psy467 14 HGASVNCLALGKKSGQVLATGGDD------------------------KKVNLWALGKSNCIMSLS-GHSTPVESVQFGN 68 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~D------------------------G~I~IWdl~t~~~i~~l~-~h~~~V~sLafSp 68 (845)
--+.|.++++++ +|+++++...+ +.|.+||..+++.+..+. ++......+++++
T Consensus 22 ~l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 22 LPGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CCSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT
T ss_pred ecCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC
Confidence 346799999999 89999888777 479999998888877664 4556899999999
Q ss_pred CCCEEEEEECCCcEEEEECCCCc-EEEEE---------cCCCCCeEEEEEcc-CCCEEEEEE-CCCeEEEEECCCCceEE
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPT-VQRTL---------NGHKSSITSVDFHP-YGDYLCSGS-LDSFIKLWDLRRKGCIY 136 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~-~v~~l---------~~h~~~V~~lafsp-dg~~Lasgs-~DG~I~IWDl~t~~~l~ 136 (845)
+|+++++...++.|++||..... .+..+ ..+......++++| ++..+++.+ .++.|++|| .++..+.
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~ 179 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVT 179 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEE
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEE
Confidence 99988888888999999986542 45555 23444688999999 787777776 689999999 5677777
Q ss_pred EEcCCC----------CCeEEEEEecC-CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecC
Q psy467 137 TYRGHS----------KSINSIRFSPD-GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSH 205 (845)
Q Consensus 137 ~~~~h~----------~~V~sLafSPd-g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~sp 205 (845)
.+.... ....+++++|+ ++++++...++.|++ ||..+++.
T Consensus 180 ~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~-------------~~~~~G~~---------------- 230 (329)
T 3fvz_A 180 QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQC-------------FKTDTKEF---------------- 230 (329)
T ss_dssp EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEE-------------EETTTCCE----------------
T ss_pred EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEE-------------EECCCCcE----------------
Confidence 764222 23889999998 666777777888999 99887766
Q ss_pred CCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC
Q psy467 206 NTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP 285 (845)
Q Consensus 206 dg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP 285 (845)
+..+....... .+ ..++++| +. .+..
T Consensus 231 ----~~~~~~~~~~~-----~~---------------------------~~~~~~p-g~-----------------~~~~ 256 (329)
T 3fvz_A 231 ----VREIKHASFGR-----NV---------------------------FAISYIP-GF-----------------LFAV 256 (329)
T ss_dssp ----EEEECCTTTTT-----CE---------------------------EEEEEET-TE-----------------EEEE
T ss_pred ----EEEEeccccCC-----Cc---------------------------ceeeecC-CE-----------------EEEe
Confidence 44432211110 01 4455555 22 1112
Q ss_pred CCCcccceEEEEEeCCCeEEEEECCCCeEEEEec---CCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecC
Q psy467 286 QSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE---KNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352 (845)
Q Consensus 286 dg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~---gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~t 352 (845)
+|+ .+++...+..|++||..+++.+..+. ++...+..++++|+|.++++...++ |++|+++.
T Consensus 257 ~g~-----~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 257 NGK-----PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp ECC-----CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CCC-----EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 332 33444456689999999999998884 5667899999999997777777777 99999864
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.67 E-value=5.3e-14 Score=148.92 Aligned_cols=240 Identities=9% Similarity=0.146 Sum_probs=173.6
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec------CCCCCeEEEEEc-CCCCEEEEEEC-CCcEEE
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS------GHSTPVESVQFG-NGEETLSAGCQ-SGSIKI 84 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~------~h~~~V~sLafS-pdg~~LaSgs~-DGtV~V 84 (845)
+|-..+.++++++ +++++++...++.|.+||.. ++.+..+. ++...+.+++++ +++..+++... ++.|.+
T Consensus 27 g~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECT-TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECC-CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 4456899999999 88988888889999999986 66666653 244678999994 67766666543 889999
Q ss_pred EECCCCcEEEEEcC-CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc--CCCCCeEEEEEecCCCEEEEEe
Q psy467 85 WNLAVPTVQRTLNG-HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR--GHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 85 WDl~tg~~v~~l~~-h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~--~h~~~V~sLafSPdg~~Lasgs 161 (845)
|| .+++.+..+.. +...+.+++++++|+.+++...++.|.+||.. ++.+..+. .+...+.+++++++|+++++..
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 99 56777777743 34568999999999977777778999999964 56666654 3445689999999999777777
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
.++.|.+ ||.. ++. +..+.....
T Consensus 183 ~~~~i~~-------------~~~~-g~~--------------------~~~~~~~g~----------------------- 205 (286)
T 1q7f_A 183 RAHCVKV-------------FNYE-GQY--------------------LRQIGGEGI----------------------- 205 (286)
T ss_dssp GGTEEEE-------------EETT-CCE--------------------EEEESCTTT-----------------------
T ss_pred CCCEEEE-------------EcCC-CCE--------------------EEEEccCCc-----------------------
Confidence 7889999 9863 322 222211100
Q ss_pred chhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCC-eEEEEECCCCeEEEEecC
Q psy467 242 EEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR-TVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG-~I~IWDl~s~~~l~tl~g 320 (845)
...+..++++++|+ ++++...++ .|.+||. +++.+..+..
T Consensus 206 ---------------------------------~~~p~~i~~d~~G~-----l~v~~~~~~~~i~~~~~-~g~~~~~~~~ 246 (286)
T 1q7f_A 206 ---------------------------------TNYPIGVGINSNGE-----ILIADNHNNFNLTIFTQ-DGQLISALES 246 (286)
T ss_dssp ---------------------------------SCSEEEEEECTTCC-----EEEEECSSSCEEEEECT-TSCEEEEEEE
T ss_pred ---------------------------------cCCCcEEEECCCCC-----EEEEeCCCCEEEEEECC-CCCEEEEEcc
Confidence 01123444555554 788887776 9999995 4666666665
Q ss_pred CC--CCEEEEEEeCCCCEEEEEeCCC-EEEEEecCC
Q psy467 321 NS--STIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353 (845)
Q Consensus 321 h~--~~VtslafSpdG~~Lasgs~DG-I~IWDl~tg 353 (845)
+. ..+.+++++|+|+++++ +.++ |++|++...
T Consensus 247 ~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 247 KVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp SSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred cCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 43 34789999999987766 5677 999998654
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.67 E-value=4.4e-15 Score=176.45 Aligned_cols=265 Identities=13% Similarity=0.060 Sum_probs=174.3
Q ss_pred eEEeccCCCcEE---------EEEEe--cCCCCE-EEEEeC-CCeEEEEECC--CCeeEEEecC-----CCCCeEEEEEc
Q psy467 8 AEDFMAHGASVN---------CLALG--KKSGQV-LATGGD-DKKVNLWALG--KSNCIMSLSG-----HSTPVESVQFG 67 (845)
Q Consensus 8 l~~L~gH~~~V~---------~LafS--p~dg~~-LaTgs~-DG~I~IWdl~--t~~~i~~l~~-----h~~~V~sLafS 67 (845)
.+++..|...|. +..|+ | +|+. |+.++. +..|.+|++. +......+.. |...+.+++|+
T Consensus 60 ~~~l~~~~~~~~~~~~~~~~~~~~~~~SP-Dg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~s 138 (662)
T 3azo_A 60 EESALPAPWNVRNRVFEYSGFPWAGVPRP-AGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLL 138 (662)
T ss_dssp EEESSCTTCCBCCCGGGTCCCCEEEECCS-SSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEE
T ss_pred cceeCCCCccccccccccCCccceeeeec-CCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEEC
Confidence 357778877777 67776 8 7777 766554 5667777765 2034555665 66788999999
Q ss_pred CCCCEEEEEECC----------CcEEEEECCC------CcEEEEEc-CCCCCeEEEEEccCCCEEEEEECC--------C
Q psy467 68 NGEETLSAGCQS----------GSIKIWNLAV------PTVQRTLN-GHKSSITSVDFHPYGDYLCSGSLD--------S 122 (845)
Q Consensus 68 pdg~~LaSgs~D----------GtV~VWDl~t------g~~v~~l~-~h~~~V~~lafspdg~~Lasgs~D--------G 122 (845)
|||+.|++++.+ ..|.+||+.+ ++. ..+. .+...+..++|+|||++|+.++.+ .
T Consensus 139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~ 217 (662)
T 3azo_A 139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGT 217 (662)
T ss_dssp TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCE
T ss_pred CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCc
Confidence 999999998876 5899999988 554 4454 556678889999999999987755 3
Q ss_pred eEEEEECC-CC---ceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCC
Q psy467 123 FIKLWDLR-RK---GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYT 198 (845)
Q Consensus 123 ~I~IWDl~-t~---~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i 198 (845)
.|++||+. ++ ........+...+..++|+|||++++++..++...+ +.||+.+++.
T Consensus 218 ~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l-----------~~~~~~~~~~--------- 277 (662)
T 3azo_A 218 ELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNL-----------HRVDPATGAA--------- 277 (662)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEE-----------EEECTTTCCE---------
T ss_pred EEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEE-----------EEEECCCCce---------
Confidence 79999998 56 444444445678999999999998888878884444 1166655443
Q ss_pred cceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCc
Q psy467 199 SSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSR 278 (845)
Q Consensus 199 ~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I 278 (845)
. .+..+... + ....|+++ +
T Consensus 278 -----------~-~l~~~~~~-------~---------------------------~~p~w~~~---------------~ 296 (662)
T 3azo_A 278 -----------T-QLCRREEE-------F---------------------------AGPLWTPG---------------M 296 (662)
T ss_dssp -----------E-ESSCCSSB-------S---------------------------SCCCCSTT---------------C
T ss_pred -----------e-eccccccc-------c---------------------------cCcccccc---------------C
Confidence 1 11111110 0 11112222 2
Q ss_pred eeEEEcCCCCcccceEEEEEeCCCeEEEE--ECCCCeEEEEecCCCCCEEEE-EEeCCCCEEEEEeCCC-EEEE--EecC
Q psy467 279 TSLSILPQSPMLCFILTTSSSADRTVNFW--DLEKFSLVSTTEKNSSTIRRL-TFSEGGECLLGGDTEG-LKVY--GWEP 352 (845)
Q Consensus 279 ~slafSPdg~~~~~~lLatgs~DG~I~IW--Dl~s~~~l~tl~gh~~~Vtsl-afSpdG~~Lasgs~DG-I~IW--Dl~t 352 (845)
..++|+|+++ ++++++. +.++|| |+.+++ +..+..|...+..+ +++.+.-++++++.+. ..|| |+.+
T Consensus 297 ~~~~~~~~~~-----~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~ 369 (662)
T 3azo_A 297 RWFAPLANGL-----IAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVT 369 (662)
T ss_dssp CSEEECTTSC-----EEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTT
T ss_pred ceEeEeCCCE-----EEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 3466666666 8888888 998998 666665 67777777778777 5544333444555555 4555 5556
Q ss_pred CceEEEecCC
Q psy467 353 ARQYDAQPMG 362 (845)
Q Consensus 353 gk~l~tl~~h 362 (845)
++.......+
T Consensus 370 g~~~~l~~~~ 379 (662)
T 3azo_A 370 GRARTIGARH 379 (662)
T ss_dssp CCEEEEESCC
T ss_pred CceEEeecCC
Confidence 6654333333
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.65 E-value=3.4e-14 Score=153.63 Aligned_cols=263 Identities=10% Similarity=0.063 Sum_probs=182.9
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR 94 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~ 94 (845)
...|.+++|++ ++..++..+.++.++.| .++....+..+...+.+++|++++++++++..++.|.+||..+++...
T Consensus 5 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~ 80 (333)
T 2dg1_A 5 QQDLPTLFYSG-KSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR 80 (333)
T ss_dssp -CCCCBCCSCG-GGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE
T ss_pred ccccceeeecC-CccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE
Confidence 34578899998 66667766778899999 456677777788889999999999988888889999999999887665
Q ss_pred EEcCCCCCeEEEEEccCCCEEEEEECC----CeEEEEECCCCceEEEEc--CCCCCeEEEEEecCCCEEEEEeCC-----
Q psy467 95 TLNGHKSSITSVDFHPYGDYLCSGSLD----SFIKLWDLRRKGCIYTYR--GHSKSINSIRFSPDGQWIASGGED----- 163 (845)
Q Consensus 95 ~l~~h~~~V~~lafspdg~~Lasgs~D----G~I~IWDl~t~~~l~~~~--~h~~~V~sLafSPdg~~Lasgs~D----- 163 (845)
....+...+.+++|+++|+++++...+ +.|.+||..++.....+. .....+.+++++|+|+++++...+
T Consensus 81 ~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 81 PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 554466789999999999887777666 689999998776553333 234578999999999877765431
Q ss_pred -CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 164 -GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 164 -G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
+.|.. ||..+++. ..+....
T Consensus 161 ~~~l~~-------------~~~~~~~~---------------------~~~~~~~------------------------- 181 (333)
T 2dg1_A 161 LGGVYY-------------VSPDFRTV---------------------TPIIQNI------------------------- 181 (333)
T ss_dssp CEEEEE-------------ECTTSCCE---------------------EEEEEEE-------------------------
T ss_pred CceEEE-------------EeCCCCEE---------------------EEeecCC-------------------------
Confidence 33333 55443322 1110000
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE-EEEeCCCeEEEEECCC-CeEEE----
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT-TSSSADRTVNFWDLEK-FSLVS---- 316 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL-atgs~DG~I~IWDl~s-~~~l~---- 316 (845)
..+..++|+|+|+ .+ ++.+.++.|.+||+.+ +..+.
T Consensus 182 ---------------------------------~~~~~i~~~~dg~-----~l~v~~~~~~~i~~~d~~~~g~~~~~~~~ 223 (333)
T 2dg1_A 182 ---------------------------------SVANGIALSTDEK-----VLWVTETTANRLHRIALEDDGVTIQPFGA 223 (333)
T ss_dssp ---------------------------------SSEEEEEECTTSS-----EEEEEEGGGTEEEEEEECTTSSSEEEEEE
T ss_pred ---------------------------------CcccceEECCCCC-----EEEEEeCCCCeEEEEEecCCCcCcccccc
Confidence 0123344555544 44 4555678999999863 32221
Q ss_pred ----EecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCC------CeEEEEEc-CCceEEEE
Q psy467 317 ----TTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWG------KVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 317 ----tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~------~VtsVafS-dg~lLaaS 380 (845)
.+.++ ..+..++++++|++.++...++ |.+||. .++.+..+..+.. .+.+++|+ |++.|.++
T Consensus 224 ~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~ 297 (333)
T 2dg1_A 224 TIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIIC 297 (333)
T ss_dssp EEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEE
T ss_pred eEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEE
Confidence 12222 4678899999999888777777 999998 5666776655433 68999999 76665544
No 173
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.64 E-value=4.3e-15 Score=180.06 Aligned_cols=254 Identities=11% Similarity=0.076 Sum_probs=171.5
Q ss_pred CCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCC-----eEEEEEccCCCEEEEEECC---------CeE
Q psy467 59 TPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS-----ITSVDFHPYGDYLCSGSLD---------SFI 124 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~-----V~~lafspdg~~Lasgs~D---------G~I 124 (845)
....+++|+||+++|+++ |++|++||+.+++....+.+|... ...++|||||++|+.++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 346689999999988886 999999999999988888776543 2347899999999998876 567
Q ss_pred EEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCC---------
Q psy467 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPP--------- 195 (845)
Q Consensus 125 ~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~--------- 195 (845)
.+||+.+++.. .+..+...+...+|||||+.||.+. ++.|++ ||+.++........
T Consensus 95 ~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~-------------~~~~~~~~~~lt~~g~~~~~~~g 159 (740)
T 4a5s_A 95 DIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYV-------------KIEPNLPSYRITWTGKEDIIYNG 159 (740)
T ss_dssp EEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEE-------------ESSTTSCCEECCSCCBTTTEEES
T ss_pred EEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEE-------------EECCCCceEEEcCCCCccceecC
Confidence 79999988754 4566778899999999999998884 678998 99887765322111
Q ss_pred -----------CCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCC
Q psy467 196 -----------QYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRS 264 (845)
Q Consensus 196 -----------~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~ 264 (845)
.....+.|||||+.++........ +.+ ..+.+.....
T Consensus 160 ~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~-----v~~---------------------------~~~~~~~~~~ 207 (740)
T 4a5s_A 160 ITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTE-----VPL---------------------------IEYSFYSDES 207 (740)
T ss_dssp BCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTT-----CCE---------------------------EEEEECCSTT
T ss_pred cccccccchhcCCCcceEECCCCCEEEEEEEcccC-----Cce---------------------------EEEEeecCCC
Confidence 111236677777766654332221 001 1121111110
Q ss_pred cCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCC---C---eEEEEec-----CCCCCEEEEEEeCC
Q psy467 265 LNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEK---F---SLVSTTE-----KNSSTIRRLTFSEG 333 (845)
Q Consensus 265 ~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s---~---~~l~tl~-----gh~~~VtslafSpd 333 (845)
.....+..+.+.+.|.. .....|++||+.+ + +...... +|...+..++||||
T Consensus 208 --------~~~~~~~~~~yp~~G~~---------~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspd 270 (740)
T 4a5s_A 208 --------LQYPKTVRVPYPKAGAV---------NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQ 270 (740)
T ss_dssp --------CSSCEEEEEECCBTTSC---------CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEET
T ss_pred --------CCCCcceeecCCCCcCc---------CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCC
Confidence 11233455666666641 1123689999998 7 4433222 37778999999999
Q ss_pred CCEEEEEeC----CC-EEEEEecCCc----eE--EEe--cCCCCCeE-----EEEEc-CCceEE
Q psy467 334 GECLLGGDT----EG-LKVYGWEPAR----QY--DAQ--PMGWGKVQ-----DLAVT-GTQLWF 378 (845)
Q Consensus 334 G~~Lasgs~----DG-I~IWDl~tgk----~l--~tl--~~h~~~Vt-----sVafS-dg~lLa 378 (845)
|+.++.... +. |.+||+.+++ +. ..+ ..|...|. .++|+ ||+.|+
T Consensus 271 g~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 271 ERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp TEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEE
T ss_pred CeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEE
Confidence 997765532 22 9999999987 33 222 44665554 78999 998766
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.63 E-value=2.9e-14 Score=156.90 Aligned_cols=162 Identities=11% Similarity=0.005 Sum_probs=119.6
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEE--cCCCCEEEEEE------------
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF--GNGEETLSAGC------------ 77 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLaf--Spdg~~LaSgs------------ 77 (845)
.+|...+.+++|+| +|+.|++++.++.|++||+.+++....+..+...+....| ++++.+++...
T Consensus 77 ~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~ 155 (388)
T 3pe7_A 77 EGRGDNTFGGFLSP-DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDW 155 (388)
T ss_dssp CSSCBCSSSCEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH
T ss_pred eCCCCCccceEEcC-CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccccccc
Confidence 34555556789999 9999999999999999999999887777766665654444 89999887532
Q ss_pred ----------CCCcEEEEECCCCcEEEEEcCCCCCeEEEEEcc-CCCEEEEEECC------CeEEEEECCCCceEEEEcC
Q psy467 78 ----------QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLD------SFIKLWDLRRKGCIYTYRG 140 (845)
Q Consensus 78 ----------~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~D------G~I~IWDl~t~~~l~~~~~ 140 (845)
.++.|.+||+.+++..... .+...+..++|+| ||+.|+.+..+ ..|.++|+..+.. ..+..
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~ 233 (388)
T 3pe7_A 156 KKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKT 233 (388)
T ss_dssp HHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCC
T ss_pred chhhhhhccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeee
Confidence 3468999999998755444 4667789999999 99988877753 3788888865543 44443
Q ss_pred CC--CCeEEEEEecCCCEEEEEeC-CC----cEEEeeeeccCCceeEEEECCCCcc
Q psy467 141 HS--KSINSIRFSPDGQWIASGGE-DG----VVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 141 h~--~~V~sLafSPdg~~Lasgs~-DG----~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
+. ..+..++|+|||+.|+..+. ++ .|++ ||+.+++.
T Consensus 234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~-------------~d~~~g~~ 276 (388)
T 3pe7_A 234 HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYS-------------ADPETLEN 276 (388)
T ss_dssp CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEE-------------ECTTTCCE
T ss_pred CCCCcccccceECCCCCEEEEEecCCCCCcceEEE-------------EecCCCce
Confidence 43 24778899999997765443 22 2666 99988764
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.62 E-value=1.6e-13 Score=146.21 Aligned_cols=245 Identities=10% Similarity=0.004 Sum_probs=175.1
Q ss_pred eEEeccCCCcEEEEEEecCCCC-EEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQ-VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~-~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
+..+..+.....+++|+| +|+ +++++..++.|..|+..++ ...+..+...+.+++++++|+++++...++.|.+||
T Consensus 20 ~~~l~~~~~~~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVP-ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp CEEEECCCSSEEEEEEEG-GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred EEEEecCCccccCCeEeC-CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 456667778899999999 777 8888888999999999877 666777788899999999999887776678999999
Q ss_pred CCCCcEEEEEcCC----CCCeEEEEEccCCCEEEEE----E-------------CCCeEEEEECCCCceEEEEcCCCCCe
Q psy467 87 LAVPTVQRTLNGH----KSSITSVDFHPYGDYLCSG----S-------------LDSFIKLWDLRRKGCIYTYRGHSKSI 145 (845)
Q Consensus 87 l~tg~~v~~l~~h----~~~V~~lafspdg~~Lasg----s-------------~DG~I~IWDl~t~~~l~~~~~h~~~V 145 (845)
..+++........ ...+..++++|+|+++++. + ..+.|..++.. ++ +..+..+....
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~ 174 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKP 174 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCC
Confidence 9888765443221 2346789999999988873 2 13456666654 44 34445566678
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeE-EEEecCCCCCccce
Q psy467 146 NSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLR-KSFTKGRPGGTKAK 224 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l-~~~~~h~~~~~~~~ 224 (845)
..++|+|+++.+++.+.++.|.+ ||+..... + ....
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~-------------~~~~~~g~--------------------~~~~~~---------- 211 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHR-------------YCLNARGE--------------------TEYQGV---------- 211 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEE-------------EEECSSSC--------------------EEEEEE----------
T ss_pred ccEEECCCCCEEEEeCCCCeEEE-------------EEECCCCc--------------------CcCCCe----------
Confidence 99999999998877777788888 88762111 1 0000
Q ss_pred eeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeE
Q psy467 225 IDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTV 304 (845)
Q Consensus 225 i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I 304 (845)
+ +.. . ...+..++++++|+ ++++. ++.|
T Consensus 212 --~-------------------------------~~~-~-----------~~~p~~i~~d~~G~-----l~v~~--~~~v 239 (296)
T 3e5z_A 212 --H-------------------------------FTV-E-----------PGKTDGLRVDAGGL-----IWASA--GDGV 239 (296)
T ss_dssp --E-------------------------------ECC-S-----------SSCCCSEEEBTTSC-----EEEEE--TTEE
T ss_pred --E-------------------------------eeC-C-----------CCCCCeEEECCCCC-----EEEEc--CCeE
Confidence 0 000 0 01123455555555 66555 7899
Q ss_pred EEEECCCCeEEEEecCCCCCEEEEEE-eCCCCEEEEEeCCCEEEEEecCCc
Q psy467 305 NFWDLEKFSLVSTTEKNSSTIRRLTF-SEGGECLLGGDTEGLKVYGWEPAR 354 (845)
Q Consensus 305 ~IWDl~s~~~l~tl~gh~~~Vtslaf-SpdG~~Lasgs~DGI~IWDl~tgk 354 (845)
.+||.. ++.+..+..+.. +++++| +|+++.|++++.+++.-++..+.+
T Consensus 240 ~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~ 288 (296)
T 3e5z_A 240 HVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNVRG 288 (296)
T ss_dssp EEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEECSCCB
T ss_pred EEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEccccc
Confidence 999987 778888887767 999999 589999999998876556665544
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.61 E-value=3.3e-13 Score=162.65 Aligned_cols=246 Identities=7% Similarity=0.005 Sum_probs=171.0
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCC-----eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCc-------
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDK-----KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGS------- 81 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG-----~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGt------- 81 (845)
|...+.+++||| +|++||.+..++ .|++||+.+++.......+ ..+..++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 123 GTVALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp SCEEEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCEEEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 445689999999 999998776543 8999999999877643322 23678999999999999988766
Q ss_pred ---------EEEEECCCCcE--EEEE--cCCCCCeEEEEEccCCCEEEEEEC-----CCeEEEEECCC------Cc-eEE
Q psy467 82 ---------IKIWNLAVPTV--QRTL--NGHKSSITSVDFHPYGDYLCSGSL-----DSFIKLWDLRR------KG-CIY 136 (845)
Q Consensus 82 ---------V~VWDl~tg~~--v~~l--~~h~~~V~~lafspdg~~Lasgs~-----DG~I~IWDl~t------~~-~l~ 136 (845)
|.+|++.+++. ...+ ..+...+..+.|+|||++|+.++. +..|++||+.+ +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 99999988752 2222 334556789999999999987764 56899999976 43 355
Q ss_pred EEcCCCCCeEEEEEecCCCEEEEEeCCC----cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEE
Q psy467 137 TYRGHSKSINSIRFSPDGQWIASGGEDG----VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKS 212 (845)
Q Consensus 137 ~~~~h~~~V~sLafSPdg~~Lasgs~DG----~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~ 212 (845)
.+..+...+.. .|+|+|+.|+..+..+ .|.+ ||+.++... ....
T Consensus 281 ~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~-------------~d~~~~~~~------------------~~~~ 328 (710)
T 2xdw_A 281 KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLIN-------------IDFTDPEES------------------KWKV 328 (710)
T ss_dssp EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEE-------------EETTSCCGG------------------GCEE
T ss_pred EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEE-------------EeCCCCCcc------------------ccee
Confidence 56556555554 5889999887766533 3555 888765320 0112
Q ss_pred EecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccc
Q psy467 213 FTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCF 292 (845)
Q Consensus 213 ~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~ 292 (845)
+..+... ..+ ..+.|++++.
T Consensus 329 l~~~~~~-----~~~---------------------------~~~~~~~~~~---------------------------- 348 (710)
T 2xdw_A 329 LVPEHEK-----DVL---------------------------EWVACVRSNF---------------------------- 348 (710)
T ss_dssp EECCCSS-----CEE---------------------------EEEEEETTTE----------------------------
T ss_pred ccCCCCC-----CeE---------------------------EEEEEEcCCE----------------------------
Confidence 2222110 001 3344444443
Q ss_pred eEEEEEeCCCe--EEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEE-eC---CC-EEEEEecCCc
Q psy467 293 ILTTSSSADRT--VNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DT---EG-LKVYGWEPAR 354 (845)
Q Consensus 293 ~lLatgs~DG~--I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasg-s~---DG-I~IWDl~tgk 354 (845)
++++...|+. |++||+.+++.+..+..+.+.+..++++|+++.|+.. +. .+ |.+||+.+++
T Consensus 349 -lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 349 -LVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp -EEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred -EEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 7888888874 6677887788888888777789999999999876644 22 23 8899988876
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.59 E-value=4.4e-13 Score=146.07 Aligned_cols=243 Identities=9% Similarity=0.097 Sum_probs=174.7
Q ss_pred CCCeEEEEEcCCCCEEEEEECC------------------------CcEEEEECCCCcEEEEEc-CCCCCeEEEEEccCC
Q psy467 58 STPVESVQFGNGEETLSAGCQS------------------------GSIKIWNLAVPTVQRTLN-GHKSSITSVDFHPYG 112 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~D------------------------GtV~VWDl~tg~~v~~l~-~h~~~V~~lafspdg 112 (845)
-..+.+++++++|+++++...+ +.|.+||..+++.+..+. .+......++++++|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999999888766 479999999998877765 344578899999999
Q ss_pred CEEEEEECCCeEEEEECCCCc-eEEEEc---------CCCCCeEEEEEec-CCCEEEEEe-CCCcEEEeeeeccCCceeE
Q psy467 113 DYLCSGSLDSFIKLWDLRRKG-CIYTYR---------GHSKSINSIRFSP-DGQWIASGG-EDGVVRIGASFHLTNTSIH 180 (845)
Q Consensus 113 ~~Lasgs~DG~I~IWDl~t~~-~l~~~~---------~h~~~V~sLafSP-dg~~Lasgs-~DG~I~I~~~~~~~~~~I~ 180 (845)
+++++...++.|++||..... .+..+. .+-....+++++| +++++++.+ .++.|++
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~------------ 170 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQ------------ 170 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEE------------
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEE------------
Confidence 988888888999999986432 555552 3344689999999 788877776 6888988
Q ss_pred EEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEc
Q psy467 181 VVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQ 260 (845)
Q Consensus 181 vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fs 260 (845)
|| .++.. +..+...... .
T Consensus 171 -~~-~~g~~--------------------~~~~~~~g~~-------~--------------------------------- 188 (329)
T 3fvz_A 171 -FS-PSGKF--------------------VTQWGEESSG-------S--------------------------------- 188 (329)
T ss_dssp -EC-TTSCE--------------------EEEECEECCS-------S---------------------------------
T ss_pred -Ec-CCCCE--------------------EEEeccCCCC-------C---------------------------------
Confidence 88 33443 3332211100 0
Q ss_pred CCCCcCCCCcccccccCceeEEEcCC-CCcccceEEEEEeCCCeEEEEECCCCeEEEEec--CCCCCEEEEEEeCCCCEE
Q psy467 261 PHRSLNRSGTCVPVSVSRTSLSILPQ-SPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE--KNSSTIRRLTFSEGGECL 337 (845)
Q Consensus 261 pdg~~~~~~~~~~~~~~I~slafSPd-g~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~--gh~~~VtslafSpdG~~L 337 (845)
............++++|+ +. ++++...++.|++||..+++.+..+. .+...+.+++|+| |..+
T Consensus 189 --------~~~~~~~~~p~gia~d~~~g~-----l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~ 254 (329)
T 3fvz_A 189 --------SPRPGQFSVPHSLALVPHLDQ-----LCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLF 254 (329)
T ss_dssp --------SCCTTEESCEEEEEEETTTTE-----EEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEE
T ss_pred --------CCCCcccCCCcEEEEECCCCE-----EEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEE
Confidence 000000122345666665 44 78888889999999999899888885 4566789999999 3333
Q ss_pred EE-------EeCCC-EEEEEecCCceEEEec---CCCCCeEEEEEc-CCceEEEE-----EEEEeeCC
Q psy467 338 LG-------GDTEG-LKVYGWEPARQYDAQP---MGWGKVQDLAVT-GTQLWFRR-----VGTWSHQD 388 (845)
Q Consensus 338 as-------gs~DG-I~IWDl~tgk~l~tl~---~h~~~VtsVafS-dg~lLaaS-----VsiW~~d~ 388 (845)
++ ...+. |++|+..+++.+..+. .+...+.+++++ +|.++++. |..|..++
T Consensus 255 ~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 255 AVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 33 23344 9999999999998874 677789999999 88655555 78887654
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.59 E-value=3.5e-12 Score=137.71 Aligned_cols=243 Identities=10% Similarity=0.042 Sum_probs=167.4
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC----CcEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS----GSIKI 84 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D----GtV~V 84 (845)
..+.++...+.+++|++ +|++++++..++.|.+||..+++.......+...+.+++|+++++++++...+ +.|.+
T Consensus 38 ~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EEEESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred EEEeccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 45667778899999998 88988888889999999998887665554567789999999999988877666 68999
Q ss_pred EECCCCcEEEEEc--CCCCCeEEEEEccCCCEEEEEEC------CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCE
Q psy467 85 WNLAVPTVQRTLN--GHKSSITSVDFHPYGDYLCSGSL------DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 85 WDl~tg~~v~~l~--~h~~~V~~lafspdg~~Lasgs~------DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~ 156 (845)
||.+++.....+. .+...+.+++++|+|+.+++... .+.|..||..+++... +......+.+++|+|+|+.
T Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKV 195 (333)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSE
T ss_pred EeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCE
Confidence 9998877554443 24457899999999987776653 3556667765544433 2223345789999999986
Q ss_pred EEEE-eCCCcEEEeeeeccCCceeEEEECCC-CccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 157 IASG-GEDGVVRIGASFHLTNTSIHVVDLSL-VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 157 Lasg-s~DG~I~I~~~~~~~~~~I~vWDl~t-g~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
++.+ +.++.|.+ ||+.+ +.. +..+... +
T Consensus 196 l~v~~~~~~~i~~-------------~d~~~~g~~--------------------~~~~~~~----------~------- 225 (333)
T 2dg1_A 196 LWVTETTANRLHR-------------IALEDDGVT--------------------IQPFGAT----------I------- 225 (333)
T ss_dssp EEEEEGGGTEEEE-------------EEECTTSSS--------------------EEEEEEE----------E-------
T ss_pred EEEEeCCCCeEEE-------------EEecCCCcC--------------------cccccce----------E-------
Confidence 6544 45778888 98763 332 1111000 0
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL 314 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~ 314 (845)
...+. +. ..+..++++++|+ ++++...++.|.+||. +++.
T Consensus 226 ---------------------~~~~~--~~-----------~~~~~i~~d~~G~-----l~v~~~~~~~v~~~d~-~g~~ 265 (333)
T 2dg1_A 226 ---------------------PYYFT--GH-----------EGPDSCCIDSDDN-----LYVAMYGQGRVLVFNK-RGYP 265 (333)
T ss_dssp ---------------------EEECC--SS-----------SEEEEEEEBTTCC-----EEEEEETTTEEEEECT-TSCE
T ss_pred ---------------------EEecC--CC-----------CCCCceEECCCCC-----EEEEEcCCCEEEEECC-CCCE
Confidence 00000 00 1123455555555 7777777899999998 4666
Q ss_pred EEEecCCCC------CEEEEEEeCCCCEEEEEeCC
Q psy467 315 VSTTEKNSS------TIRRLTFSEGGECLLGGDTE 343 (845)
Q Consensus 315 l~tl~gh~~------~VtslafSpdG~~Lasgs~D 343 (845)
+..+..+.. .+.+++|++||+.|++++.+
T Consensus 266 ~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 266 IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 666654432 68999999998877766554
No 179
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.58 E-value=2.5e-11 Score=127.73 Aligned_cols=269 Identities=9% Similarity=0.038 Sum_probs=183.6
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEE-ecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMS-LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 10 ~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~-l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
.+..+...+.++++++ +|+++++...++.|.+||.. ++.... ...+...+.++++++++..+++...++.|..||..
T Consensus 9 ~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 9 NLTNQDTGPYGITVSD-KGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp ECCSSSCCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred cCCCcCCCccceEECC-CCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 4556677899999999 88877776667899999987 544332 23356789999999999988777668899999986
Q ss_pred CCcEE-EEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE-EcCCCCCeEEEEEecCCCEEEEEeCCCcE
Q psy467 89 VPTVQ-RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRFSPDGQWIASGGEDGVV 166 (845)
Q Consensus 89 tg~~v-~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~-~~~h~~~V~sLafSPdg~~Lasgs~DG~I 166 (845)
++.. ..+......+.++++.++++.+++...++.|..||. +++.... .......+.+++++++|+++++...++.|
T Consensus 87 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 87 -GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp -SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred -CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 4432 222234557899999999988777777889999998 5554432 22344578999999999877776667788
Q ss_pred EEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhh
Q psy467 167 RIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELF 246 (845)
Q Consensus 167 ~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~ 246 (845)
.. ||. +++. .. +.....
T Consensus 165 ~~-------------~~~-~g~~--------------------~~-~~~~~~---------------------------- 181 (299)
T 2z2n_A 165 GR-------------ITE-SGDI--------------------TE-FKIPTP---------------------------- 181 (299)
T ss_dssp EE-------------ECT-TCCE--------------------EE-EECSST----------------------------
T ss_pred EE-------------EcC-CCcE--------------------EE-eeCCCC----------------------------
Confidence 88 887 4433 11 100000
Q ss_pred hhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE-ecCCCCCE
Q psy467 247 ATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST-TEKNSSTI 325 (845)
Q Consensus 247 ~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t-l~gh~~~V 325 (845)
...+..++++++|. ++++...++.|.+||. +++.... +..+...+
T Consensus 182 ----------------------------~~~~~~i~~~~~g~-----l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 227 (299)
T 2z2n_A 182 ----------------------------ASGPVGITKGNDDA-----LWFVEIIGNKIGRITT-SGEITEFKIPTPNARP 227 (299)
T ss_dssp ----------------------------TCCEEEEEECTTSS-----EEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred ----------------------------CCcceeEEECCCCC-----EEEEccCCceEEEECC-CCcEEEEECCCCCCCc
Confidence 01123344444444 7777667889999999 6654332 33345679
Q ss_pred EEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEE-ecCCCCCeEEEEEcCCceEEEE
Q psy467 326 RRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDA-QPMGWGKVQDLAVTGTQLWFRR 380 (845)
Q Consensus 326 tslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~t-l~~h~~~VtsVafSdg~lLaaS 380 (845)
.+++++++|++.++...++ |.+||. +++.... +..+...+.++++.+|+++++.
T Consensus 228 ~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~g~l~v~~ 283 (299)
T 2z2n_A 228 HAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICFDGETIWFAM 283 (299)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEECSSCEEEEE
T ss_pred eeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEecCCCEEEEe
Confidence 9999999999666654556 999998 4543222 3345567899988656665554
No 180
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.58 E-value=8.2e-13 Score=141.22 Aligned_cols=242 Identities=12% Similarity=0.049 Sum_probs=184.9
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCC-CCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCC-CCeE
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHS-TPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK-SSIT 104 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~-~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~-~~V~ 104 (845)
.+++|++++.++.|.+||.++++.+.++..+. ..+.++.++|+|++|+ +.++.|..||. +++.+..+..+. ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 36889999999999999999999999998776 5789999999999888 35788999999 799999988653 4788
Q ss_pred EEEEccCCCEEEEEEC-CCeEEEEECCCCceEEEEcC------CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCc
Q psy467 105 SVDFHPYGDYLCSGSL-DSFIKLWDLRRKGCIYTYRG------HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNT 177 (845)
Q Consensus 105 ~lafspdg~~Lasgs~-DG~I~IWDl~t~~~l~~~~~------h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~ 177 (845)
++.+.++|+++++.+. ++.|..+|. +++.+..+.. +......+++.++|+++++...++.|..
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~--------- 150 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVRE--------- 150 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEE---------
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEE---------
Confidence 9999999999999887 778888886 6787777652 1123556778999999999999999999
Q ss_pred eeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeE
Q psy467 178 SIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSA 257 (845)
Q Consensus 178 ~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l 257 (845)
||.. |+. +..+...... ...
T Consensus 151 ----~d~~-G~~--------------------~w~~~~~~~~-----------------------------------~~~ 170 (276)
T 3no2_A 151 ----IAPN-GQL--------------------LNSVKLSGTP-----------------------------------FSS 170 (276)
T ss_dssp ----ECTT-SCE--------------------EEEEECSSCC-----------------------------------CEE
T ss_pred ----ECCC-CCE--------------------EEEEECCCCc-----------------------------------cce
Confidence 9987 776 4444332111 334
Q ss_pred EEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC------CCEEEEEEe
Q psy467 258 IFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS------STIRRLTFS 331 (845)
Q Consensus 258 ~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~------~~VtslafS 331 (845)
...+++. ++++++.++.|..+|..+++.+.++..+. ..+..++..
T Consensus 171 ~~~~~g~-----------------------------~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~ 221 (276)
T 3no2_A 171 AFLDNGD-----------------------------CLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPL 221 (276)
T ss_dssp EECTTSC-----------------------------EEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEEC
T ss_pred eEcCCCC-----------------------------EEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEc
Confidence 4445555 88888888899999999999999886432 237889999
Q ss_pred CCCCEEEEEeCC--------C-EEEEEe-cCCceEEEecCCC--CCeEEEE
Q psy467 332 EGGECLLGGDTE--------G-LKVYGW-EPARQYDAQPMGW--GKVQDLA 370 (845)
Q Consensus 332 pdG~~Lasgs~D--------G-I~IWDl-~tgk~l~tl~~h~--~~VtsVa 370 (845)
++|..+++.... + .+++.+ .+++.+-.+..+. +.+++++
T Consensus 222 ~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~ 272 (276)
T 3no2_A 222 QNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMISTIC 272 (276)
T ss_dssp TTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCTTTSCCCCEEE
T ss_pred CCCCEEEEeccCccccccccCCceEEEECCCCCEEEEecCcccccceeeee
Confidence 999999887522 2 467777 4667766665433 4565554
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.58 E-value=5.9e-13 Score=160.40 Aligned_cols=258 Identities=10% Similarity=0.033 Sum_probs=171.2
Q ss_pred cCCCCEEEEEeCC-C----eEEEEECCCCeeEEEec------CCCCCeEEEEEcCCCCEEEEEECCC-----cEEEEECC
Q psy467 25 KKSGQVLATGGDD-K----KVNLWALGKSNCIMSLS------GHSTPVESVQFGNGEETLSAGCQSG-----SIKIWNLA 88 (845)
Q Consensus 25 p~dg~~LaTgs~D-G----~I~IWdl~t~~~i~~l~------~h~~~V~sLafSpdg~~LaSgs~DG-----tV~VWDl~ 88 (845)
| +|++++....+ + .|.+.+..+++....+. +|...+..++|||||++||.+..++ .|++||+.
T Consensus 81 ~-dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~ 159 (710)
T 2xdw_A 81 K-KGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD 159 (710)
T ss_dssp E-ETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT
T ss_pred E-ECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC
Confidence 6 77777765432 2 34444444444332221 2444688999999999998876543 89999999
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCe----------------EEEEECCCCce----EEEEcCCCCCeEEE
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF----------------IKLWDLRRKGC----IYTYRGHSKSINSI 148 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~----------------I~IWDl~t~~~----l~~~~~h~~~V~sL 148 (845)
+++.+.....+ ..+..++|+|||+.|+.++.++. |++|++.++.. +.....+...+..+
T Consensus 160 tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~ 238 (710)
T 2xdw_A 160 GAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGA 238 (710)
T ss_dssp TTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred CCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEE
Confidence 99876543222 23678999999999999887765 99999988752 22222345567899
Q ss_pred EEecCCCEEEEEeC-----CCcEEEeeeeccCCceeEEEECCC------CccCCCCCCCCCcceeecCCCCeEEEEecCC
Q psy467 149 RFSPDGQWIASGGE-----DGVVRIGASFHLTNTSIHVVDLSL------VHPLGTPPPQYTSSVPFSHNTSLRKSFTKGR 217 (845)
Q Consensus 149 afSPdg~~Lasgs~-----DG~I~I~~~~~~~~~~I~vWDl~t------g~~l~~~~~~~i~svs~spdg~~l~~~~~h~ 217 (845)
.|+|||++|+.++. +..+++ ||+.+ +.. ....+..+.
T Consensus 239 ~~SpDg~~l~~~~~~~~~~~~~l~~-------------~d~~~~~~~~~~~~-------------------~~~~l~~~~ 286 (710)
T 2xdw_A 239 ELSDDGRYVLLSIREGCDPVNRLWY-------------CDLQQESNGITGIL-------------------KWVKLIDNF 286 (710)
T ss_dssp EECTTSCEEEEEEECSSSSCCEEEE-------------EEGGGSSSSSCSSC-------------------CCEEEECSS
T ss_pred EEcCCCCEEEEEEEccCCCccEEEE-------------EECcccccccCCcc-------------------ceEEeeCCC
Confidence 99999999887764 445666 88865 211 012222222
Q ss_pred CCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEE
Q psy467 218 PGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTS 297 (845)
Q Consensus 218 ~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLat 297 (845)
.. ....|++++. .|+.
T Consensus 287 ~~-----------------------------------~~~~~s~dg~-----------------------------~l~~ 302 (710)
T 2xdw_A 287 EG-----------------------------------EYDYVTNEGT-----------------------------VFTF 302 (710)
T ss_dssp SS-----------------------------------CEEEEEEETT-----------------------------EEEE
T ss_pred Cc-----------------------------------EEEEEeccCC-----------------------------EEEE
Confidence 21 1123445544 4444
Q ss_pred EeC----CCeEEEEECCCCe--EEEEecCCCC--CEEEEEEeCCCCEEEEEeCCC---EEEEEecCCceEEEecCCCCCe
Q psy467 298 SSA----DRTVNFWDLEKFS--LVSTTEKNSS--TIRRLTFSEGGECLLGGDTEG---LKVYGWEPARQYDAQPMGWGKV 366 (845)
Q Consensus 298 gs~----DG~I~IWDl~s~~--~l~tl~gh~~--~VtslafSpdG~~Lasgs~DG---I~IWDl~tgk~l~tl~~h~~~V 366 (845)
.+. .+.|.+||+.++. ....+..|.. .+..++|++++.++++...++ |.+|++.+++.+..+..+.+.|
T Consensus 303 ~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v 382 (710)
T 2xdw_A 303 KTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSV 382 (710)
T ss_dssp EECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEE
T ss_pred EECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceE
Confidence 443 3469999998764 2234444433 688899998888888888888 5666766788888888888889
Q ss_pred EEEEEc-CCceEEEE
Q psy467 367 QDLAVT-GTQLWFRR 380 (845)
Q Consensus 367 tsVafS-dg~lLaaS 380 (845)
..++++ ++..++.+
T Consensus 383 ~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 383 VGYSGQKKDTEIFYQ 397 (710)
T ss_dssp EEEECCTTCSEEEEE
T ss_pred EEEecCCCCCEEEEE
Confidence 999999 77666644
No 182
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.57 E-value=3.9e-12 Score=134.42 Aligned_cols=232 Identities=11% Similarity=0.116 Sum_probs=167.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcC------CCCCeEEEEEc-cCCCEEEEEEC-CCeEEEE
Q psy467 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG------HKSSITSVDFH-PYGDYLCSGSL-DSFIKLW 127 (845)
Q Consensus 56 ~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~------h~~~V~~lafs-pdg~~Lasgs~-DG~I~IW 127 (845)
++-..+.+++++++++++++...++.|.+||.. ++.+..+.. +...+.++++. ++++++++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 455679999999999988888889999999987 666666642 33568899994 66665555533 8899999
Q ss_pred ECCCCceEEEEcC-CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCC
Q psy467 128 DLRRKGCIYTYRG-HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHN 206 (845)
Q Consensus 128 Dl~t~~~l~~~~~-h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spd 206 (845)
| .+++.+..+.. +...+.+++++++|+++++...++.|.+ ||.. ++.
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~-------------~~~~-g~~----------------- 153 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVII-------------FDQN-GNV----------------- 153 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEE-------------ECTT-SCE-----------------
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEE-------------EcCC-CCE-----------------
Confidence 9 56777776643 3457899999999998877777888988 8853 332
Q ss_pred CCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC
Q psy467 207 TSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ 286 (845)
Q Consensus 207 g~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd 286 (845)
+..+..... ...+..++++++
T Consensus 154 ---~~~~~~~~~--------------------------------------------------------~~~p~~i~~~~~ 174 (286)
T 1q7f_A 154 ---LHKFGCSKH--------------------------------------------------------LEFPNGVVVNDK 174 (286)
T ss_dssp ---EEEEECTTT--------------------------------------------------------CSSEEEEEECSS
T ss_pred ---EEEeCCCCc--------------------------------------------------------cCCcEEEEECCC
Confidence 222211000 012334555555
Q ss_pred CCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC--CCCEEEEEEeCCCCEEEEEeCC-C-EEEEEecCCceEEEecCC
Q psy467 287 SPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN--SSTIRRLTFSEGGECLLGGDTE-G-LKVYGWEPARQYDAQPMG 362 (845)
Q Consensus 287 g~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh--~~~VtslafSpdG~~Lasgs~D-G-I~IWDl~tgk~l~tl~~h 362 (845)
|+ ++++...++.|++||.. ++.+..+..+ ...+..++++++|+++++...+ + |.+|+. +++.+..+..+
T Consensus 175 g~-----l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~ 247 (286)
T 1q7f_A 175 QE-----IFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESK 247 (286)
T ss_dssp SE-----EEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEES
T ss_pred CC-----EEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEccc
Confidence 54 78888889999999974 5666666543 3578999999999988888766 3 999994 56777776654
Q ss_pred C--CCeEEEEEc-CCceEEEE----EEEEee
Q psy467 363 W--GKVQDLAVT-GTQLWFRR----VGTWSH 386 (845)
Q Consensus 363 ~--~~VtsVafS-dg~lLaaS----VsiW~~ 386 (845)
. ..+.+++++ +|++++++ |.+|..
T Consensus 248 ~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~ 278 (286)
T 1q7f_A 248 VKHAQCFDVALMDDGSVVLASKDYRLYIYRY 278 (286)
T ss_dssp SCCSCEEEEEEETTTEEEEEETTTEEEEEEC
T ss_pred CCCCcceeEEECCCCcEEEECCCCeEEEEEc
Confidence 3 347899999 88877776 888864
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.55 E-value=7.7e-13 Score=143.39 Aligned_cols=243 Identities=11% Similarity=0.065 Sum_probs=154.9
Q ss_pred CcEEEEEEecCCCCEEEEEeCC---C--eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC-----------
Q psy467 16 ASVNCLALGKKSGQVLATGGDD---K--KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS----------- 79 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~D---G--~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D----------- 79 (845)
..+.+++||| +|++||.++.+ + .|.+|++.+++.......+ . +..++|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 59 ENATMPRISP-DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp ESCEEEEECT-TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC--------
T ss_pred ccCCCeEECC-CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 4688899999 99988887653 3 4888888887766555433 3 9999999999999888642
Q ss_pred ----------------CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC-------eEEEEECCCCceEE
Q psy467 80 ----------------GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS-------FIKLWDLRRKGCIY 136 (845)
Q Consensus 80 ----------------GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG-------~I~IWDl~t~~~l~ 136 (845)
..|.+||+.+++.+..+.. . .+..++|+||| .++++..++ ...+|.+.+++. .
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~ 211 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-E 211 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-E
T ss_pred ccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-E
Confidence 5799999998876455544 3 78899999999 777776542 334444434443 3
Q ss_pred EEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecC
Q psy467 137 TYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKG 216 (845)
Q Consensus 137 ~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h 216 (845)
.+..+ ..+..+ +|||++|+.++.++.-. ......+++|| +++. ......+
T Consensus 212 ~l~~~-~~~~~~--spdg~~l~~~~~~~~~~-----~~~~~~l~~~d--~~~~--------------------~~l~~~~ 261 (347)
T 2gop_A 212 KMFEK-VSFYAV--DSDGERILLYGKPEKKY-----MSEHNKLYIYD--GKEV--------------------MGILDEV 261 (347)
T ss_dssp EEEEE-ESEEEE--EECSSCEEEEECCSSSC-----CCSSCEEEEEC--SSCE--------------------EESSTTC
T ss_pred EeccC-cceeeE--CCCCCEEEEEEccccCC-----ccccceEEEEC--CCce--------------------EeccccC
Confidence 44334 445444 99999888877543100 00011222266 3332 1111111
Q ss_pred CCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEE
Q psy467 217 RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTT 296 (845)
Q Consensus 217 ~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLa 296 (845)
... + .. .++|+ |+ +++
T Consensus 262 ~~~-------~---------------------------~~-----------------------~~~~s-dg------~~~ 277 (347)
T 2gop_A 262 DRG-------V---------------------------GQ-----------------------AKIKD-GK------VYF 277 (347)
T ss_dssp CSE-------E---------------------------EE-----------------------EEEET-TE------EEE
T ss_pred Ccc-------c---------------------------CC-----------------------ccEEc-Cc------EEE
Confidence 111 1 21 13344 32 577
Q ss_pred EEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC--EEEEEecCCceEEEecCCCCC
Q psy467 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG--LKVYGWEPARQYDAQPMGWGK 365 (845)
Q Consensus 297 tgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG--I~IWDl~tgk~l~tl~~h~~~ 365 (845)
+++.++.++|| +.+++....+ .+.+.|.+++|+| .++++++.++ ..||.++ ++ ...+..|...
T Consensus 278 ~~~~~~~~~l~-~~~g~~~~~~-~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~ 342 (347)
T 2gop_A 278 TLFEEGSVNLY-IWDGEIKPIA-KGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDP 342 (347)
T ss_dssp EEEETTEEEEE-EESSSEEEEE-CSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTST
T ss_pred EEecCCcEEEE-EcCCceEEEe-cCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHh
Confidence 78889999999 8766654444 4477899999999 6777777666 4888887 54 4556655543
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.55 E-value=1.1e-13 Score=152.09 Aligned_cols=165 Identities=6% Similarity=-0.076 Sum_probs=115.1
Q ss_pred EEeccCCCcEE-EEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEE-------------------EEEcC
Q psy467 9 EDFMAHGASVN-CLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES-------------------VQFGN 68 (845)
Q Consensus 9 ~~L~gH~~~V~-~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~s-------------------LafSp 68 (845)
..+..+...+. ++.|+| +|++|+.++.++.|++|++.+++.......+...... +.|+|
T Consensus 73 ~~l~~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp 151 (396)
T 3c5m_A 73 VQLTEGKGDNTFGGFIST-DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP 151 (396)
T ss_dssp EECCCSSCBCTTTCEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred EEeecCCCCccccceECC-CCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCC
Confidence 34444444433 488999 9999999999999999999888766655544442222 34677
Q ss_pred CCCEEEEE-----ECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEcc-CCCEEEEEECC------CeEEEEECCCCceEE
Q psy467 69 GEETLSAG-----CQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLD------SFIKLWDLRRKGCIY 136 (845)
Q Consensus 69 dg~~LaSg-----s~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafsp-dg~~Lasgs~D------G~I~IWDl~t~~~l~ 136 (845)
+++.++.+ ..+..|.+||+.+++..... .+...+..+.|+| +++.|+.++.+ ..|.+||+..+.. .
T Consensus 152 dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~ 229 (396)
T 3c5m_A 152 LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-R 229 (396)
T ss_dssp CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-E
T ss_pred CCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-e
Confidence 77766554 35678999999988765555 3667789999999 78877766543 3688999876543 3
Q ss_pred EEcCC--CCCeEEEEEecCCCEEEEEeCC-----CcEEEeeeeccCCceeEEEECCCCcc
Q psy467 137 TYRGH--SKSINSIRFSPDGQWIASGGED-----GVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 137 ~~~~h--~~~V~sLafSPdg~~Lasgs~D-----G~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.+..+ ...+..++|+|||++|+.++.+ +.|++ ||+.+++.
T Consensus 230 ~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~-------------~d~~~g~~ 276 (396)
T 3c5m_A 230 KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK-------------ANPETLEN 276 (396)
T ss_dssp ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEE-------------ECTTTCCE
T ss_pred EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEE-------------EECCCCCe
Confidence 33323 2257789999999987776543 23666 99877654
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.54 E-value=6.8e-13 Score=138.51 Aligned_cols=239 Identities=6% Similarity=-0.043 Sum_probs=162.1
Q ss_pred cEEEEEEecCCCCEEE-EEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE
Q psy467 17 SVNCLALGKKSGQVLA-TGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 17 ~V~~LafSp~dg~~La-Tgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~ 95 (845)
...++++++ +|++++ +...++.|.+|+..+.........+...+.+++++++++.+++.. ++.|.+||...... ..
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~ 101 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TV 101 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EE
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-ee
Confidence 788999999 888777 446788999999765543322233445788999999998666654 88999999876543 33
Q ss_pred Ec-CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeecc
Q psy467 96 LN-GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHL 174 (845)
Q Consensus 96 l~-~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~ 174 (845)
+. .....+.+++++++|+.+++...++.|.+|+..+.............+.+++++++|+++++...++.|.+
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~------ 175 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVK------ 175 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEE------
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEE------
Confidence 32 23356899999999987777777889999987655443322233346788999999997777666788888
Q ss_pred CCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCc
Q psy467 175 TNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCD 254 (845)
Q Consensus 175 ~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~ 254 (845)
||...... ......+.
T Consensus 176 -------~~~~~~~~--------------------~~~~~~~~------------------------------------- 191 (270)
T 1rwi_B 176 -------LEAESNNQ--------------------VVLPFTDI------------------------------------- 191 (270)
T ss_dssp -------ECTTTCCE--------------------EECCCSSC-------------------------------------
T ss_pred -------EecCCCce--------------------EeecccCC-------------------------------------
Confidence 88764433 11000000
Q ss_pred eeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCC
Q psy467 255 YSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334 (845)
Q Consensus 255 ~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG 334 (845)
..+..++++++|. ++++...++.|.+||............+...+.+++++++|
T Consensus 192 ---------------------~~p~~i~~d~~g~-----l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g 245 (270)
T 1rwi_B 192 ---------------------TAPWGIAVDEAGT-----VYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDR 245 (270)
T ss_dssp ---------------------CSEEEEEECTTCC-----EEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTC
T ss_pred ---------------------CCceEEEECCCCC-----EEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCC
Confidence 1123344444443 77777778899999987654433222334578999999999
Q ss_pred CEEEEEeCCC-EEEEEecCCc
Q psy467 335 ECLLGGDTEG-LKVYGWEPAR 354 (845)
Q Consensus 335 ~~Lasgs~DG-I~IWDl~tgk 354 (845)
+++++...++ |++|++...+
T Consensus 246 ~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 246 TVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CEEEEEGGGTEEEEECCCGGG
T ss_pred CEEEEECCCCEEEEEcCCCcc
Confidence 9888877788 9999987654
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.53 E-value=3.5e-12 Score=135.85 Aligned_cols=251 Identities=12% Similarity=0.077 Sum_probs=164.2
Q ss_pred CeeEEEecCCCCCeEEEEEcCCCC-EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEE
Q psy467 48 SNCIMSLSGHSTPVESVQFGNGEE-TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126 (845)
Q Consensus 48 ~~~i~~l~~h~~~V~sLafSpdg~-~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~I 126 (845)
+..+..+..+.....+++|+|+++ .++++..++.|..||..++ ...+..+...+.+++++++|+++++...++.|.+
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLER 94 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEE
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEE
Confidence 344455656677789999999998 7778888999999999987 5666667778999999999998777767789999
Q ss_pred EECCCCceEEEEcCC----CCCeEEEEEecCCCEEEEEeCCCcEEEee----eeccCCceeEEEECCCCccCCCCCCCCC
Q psy467 127 WDLRRKGCIYTYRGH----SKSINSIRFSPDGQWIASGGEDGVVRIGA----SFHLTNTSIHVVDLSLVHPLGTPPPQYT 198 (845)
Q Consensus 127 WDl~t~~~l~~~~~h----~~~V~sLafSPdg~~Lasgs~DG~I~I~~----~~~~~~~~I~vWDl~tg~~l~~~~~~~i 198 (845)
||..+++........ ...+.+++++|+|+++++....|....+. ......+.++.++.. ++.
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~--------- 164 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL--------- 164 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE---------
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE---------
Confidence 999887755433221 23467899999999877743211110000 000000011113322 111
Q ss_pred cceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCc
Q psy467 199 SSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSR 278 (845)
Q Consensus 199 ~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I 278 (845)
..+..+. ...
T Consensus 165 ------------~~~~~~~----------------------------------------------------------~~~ 174 (296)
T 3e5z_A 165 ------------SAPIRDR----------------------------------------------------------VKP 174 (296)
T ss_dssp ------------EEEECCC----------------------------------------------------------SSE
T ss_pred ------------EEeecCC----------------------------------------------------------CCC
Confidence 1111110 112
Q ss_pred eeEEEcCCCCcccceEEEEEeCCCeEEEEECC-CCeE---EEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCc
Q psy467 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLE-KFSL---VSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPAR 354 (845)
Q Consensus 279 ~slafSPdg~~~~~~lLatgs~DG~I~IWDl~-s~~~---l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk 354 (845)
..++|+|+++ ++++.+.++.|++||+. +++. ...+..+...+..++++++|++.++. .++|.+|+.+ ++
T Consensus 175 ~gi~~s~dg~-----~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~ 247 (296)
T 3e5z_A 175 NGLAFLPSGN-----LLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GD 247 (296)
T ss_dssp EEEEECTTSC-----EEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SC
T ss_pred ccEEECCCCC-----EEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CC
Confidence 4455666665 67777788999999986 5554 33443345567889999999976666 3339999986 78
Q ss_pred eEEEecCCCCCeEEEEEc--CCceEEEE--EEEEeeCC
Q psy467 355 QYDAQPMGWGKVQDLAVT--GTQLWFRR--VGTWSHQD 388 (845)
Q Consensus 355 ~l~tl~~h~~~VtsVafS--dg~lLaaS--VsiW~~d~ 388 (845)
.+..+..+.. +++++|. +++.|.++ -.+|.++.
T Consensus 248 ~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~ 284 (296)
T 3e5z_A 248 ELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIET 284 (296)
T ss_dssp EEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEEC
T ss_pred EEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEc
Confidence 8888887777 9999995 66766655 45665443
No 187
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.51 E-value=2.8e-12 Score=142.16 Aligned_cols=270 Identities=14% Similarity=0.006 Sum_probs=171.9
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeC----------CCeEEEEECCCCeeEEEecCC------CCCeEEEEEcCCCCE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGD----------DKKVNLWALGKSNCIMSLSGH------STPVESVQFGNGEET 72 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~----------DG~I~IWdl~t~~~i~~l~~h------~~~V~sLafSpdg~~ 72 (845)
.++..+..+ .++|+| +|+++++++. ++.|.+||..+++.+.++... ......++|+|||++
T Consensus 45 ~~i~~g~~p--~i~~sp-dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 45 GMVPTAFNG--HVQVSN-DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKF 121 (361)
T ss_dssp EEEECCEEE--EEEECT-TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSE
T ss_pred EEecCCCCC--ceEECC-CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCE
Confidence 455555555 899999 9999998863 568999999999888877532 345778999999999
Q ss_pred EEEEEC--CCcEEEEECCCCcEEEE-EcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCC-CceEEEE------cCC
Q psy467 73 LSAGCQ--SGSIKIWNLAVPTVQRT-LNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRR-KGCIYTY------RGH 141 (845)
Q Consensus 73 LaSgs~--DGtV~VWDl~tg~~v~~-l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t-~~~l~~~------~~h 141 (845)
|+++.. ++.|.+||+.+++.+.. +.. . ....+.+.|++ ..+++.+.||.+.+|+... ++..... ...
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~ 199 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVK 199 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTT
T ss_pred EEEECCCCCCeEEEEECCCCcEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCC
Confidence 998874 58999999999998888 652 2 23335677766 6778888999999999865 4444221 111
Q ss_pred CCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEEC------------CCCccCCCCCCCCCcceeecCCCCe
Q psy467 142 SKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDL------------SLVHPLGTPPPQYTSSVPFSHNTSL 209 (845)
Q Consensus 142 ~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl------------~tg~~l~~~~~~~i~svs~spdg~~ 209 (845)
..+ ..+.+++++..++..+.++.+.+++.-......+..|++ ..... ++++++++.
T Consensus 200 ~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~-----------~a~~~dg~~ 267 (361)
T 2oiz_A 200 DDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNL-----------VGLHRASGR 267 (361)
T ss_dssp TSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSC-----------EEEETTTTE
T ss_pred CCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeE-----------EEEecCCCe
Confidence 222 233446677777767777777773321111111112222 12344 356777665
Q ss_pred EEEEec-CCC--CC--ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEc
Q psy467 210 RKSFTK-GRP--GG--TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSIL 284 (845)
Q Consensus 210 l~~~~~-h~~--~~--~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafS 284 (845)
+..... ... .. ....+.++++.... .+ ..+.... ..+++|+
T Consensus 268 lyv~~~~~~~~~~~~~~~~~v~viD~~t~~---------------------~v------------~~i~~~~-p~~ia~s 313 (361)
T 2oiz_A 268 MYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ---------------------RV------------ARIPGRD-ALSMTID 313 (361)
T ss_dssp EEEEEESSCCTTCTTCCCSEEEEEETTTTE---------------------EE------------EEEECTT-CCEEEEE
T ss_pred EEEEEccCCCcccccCCCceEEEEECCCCc---------------------EE------------EEEecCC-eeEEEEC
Confidence 554432 100 00 00112221111100 00 0011122 6677888
Q ss_pred CCCCcccceEEEEEeCCCeEEEEECCCC--eEEEEecCCCCCEEEEEEeCCCC
Q psy467 285 PQSPMLCFILTTSSSADRTVNFWDLEKF--SLVSTTEKNSSTIRRLTFSEGGE 335 (845)
Q Consensus 285 Pdg~~~~~~lLatgs~DG~I~IWDl~s~--~~l~tl~gh~~~VtslafSpdG~ 335 (845)
|||+ +|++++. +.|.+||..++ +.+.++..+......++++|+|+
T Consensus 314 pdg~-----~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 314 QQRN-----LMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTTT-----EEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCCC-----EEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 8887 7777776 99999999999 99999877777889999999986
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.51 E-value=1.5e-12 Score=156.64 Aligned_cols=269 Identities=10% Similarity=0.003 Sum_probs=172.9
Q ss_pred cCCCCEEEEEeCCC-----eEEEEECCCCeeEEEec------CCCCCeEEEEEcCCCCEEEEE-----ECCCcEEEEECC
Q psy467 25 KKSGQVLATGGDDK-----KVNLWALGKSNCIMSLS------GHSTPVESVQFGNGEETLSAG-----CQSGSIKIWNLA 88 (845)
Q Consensus 25 p~dg~~LaTgs~DG-----~I~IWdl~t~~~i~~l~------~h~~~V~sLafSpdg~~LaSg-----s~DGtV~VWDl~ 88 (845)
| +|++++....++ .|.+.+...++....+. +|...+.+++|||||++||.+ +.+.+|++||+.
T Consensus 77 ~-dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 77 R-RNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp E-ETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred E-ECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 6 778777665433 34444544444333332 355579999999999999843 345689999999
Q ss_pred CCcEEEEEcCCCCCe--EEEEEccCCCEEEEEECCCe-------------EEEEECCCCc----eEEEEcCCCCCeEEEE
Q psy467 89 VPTVQRTLNGHKSSI--TSVDFHPYGDYLCSGSLDSF-------------IKLWDLRRKG----CIYTYRGHSKSINSIR 149 (845)
Q Consensus 89 tg~~v~~l~~h~~~V--~~lafspdg~~Lasgs~DG~-------------I~IWDl~t~~----~l~~~~~h~~~V~sLa 149 (845)
+++.+. ..+...+ ..++|+|||+.|+.++.|.. |++|++.++. ++.....+...+.++.
T Consensus 156 tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~ 233 (695)
T 2bkl_A 156 SGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD 233 (695)
T ss_dssp TCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE
T ss_pred CCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE
Confidence 987641 1111122 67899999999999988776 9999998776 3333334556788999
Q ss_pred EecCCCEEEEEeCCC----cEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 150 FSPDGQWIASGGEDG----VVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 150 fSPdg~~Lasgs~DG----~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
|+|||++|+.++.++ .|.+ ||..++.. ..+..+...
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~-------------~~~~~~~~---------------------~~l~~~~~~------ 273 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYW-------------KRPGEKDF---------------------RLLVKGVGA------ 273 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEE-------------ECTTCSSC---------------------EEEEECSSC------
T ss_pred ECCCCCEEEEEEeCCCCceEEEE-------------EcCCCCce---------------------EEeecCCCc------
Confidence 999999988877655 3444 65443332 122222211
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe---CCC
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS---ADR 302 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs---~DG 302 (845)
+ ....+ +++. +++.+. .++
T Consensus 274 -~---------------------------~~~~~-~~g~-----------------------------l~~~s~~~~~~~ 295 (695)
T 2bkl_A 274 -K---------------------------YEVHA-WKDR-----------------------------FYVLTDEGAPRQ 295 (695)
T ss_dssp -C---------------------------EEEEE-ETTE-----------------------------EEEEECTTCTTC
T ss_pred -e---------------------------EEEEe-cCCc-----------------------------EEEEECCCCCCC
Confidence 1 22222 3332 344443 358
Q ss_pred eEEEEECCCCeE---EEEecCC-CCCEEEEEEeCCCCEEEEEeCCC-EEEEEec-CCceEEEecCC-CCCeEEEEEc-CC
Q psy467 303 TVNFWDLEKFSL---VSTTEKN-SSTIRRLTFSEGGECLLGGDTEG-LKVYGWE-PARQYDAQPMG-WGKVQDLAVT-GT 374 (845)
Q Consensus 303 ~I~IWDl~s~~~---l~tl~gh-~~~VtslafSpdG~~Lasgs~DG-I~IWDl~-tgk~l~tl~~h-~~~VtsVafS-dg 374 (845)
.|.+||+.++.. ...+..+ ...+..++|+ ++.++++...|+ .+||.++ +++....+..+ .+.|..++++ ++
T Consensus 296 ~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~ 374 (695)
T 2bkl_A 296 RVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDL 374 (695)
T ss_dssp EEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTC
T ss_pred EEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCC
Confidence 899999987652 3333333 4568889998 777888888898 7787776 46666667655 5678888888 77
Q ss_pred ceEEEE---------EEEEeeCCCCCcccc
Q psy467 375 QLWFRR---------VGTWSHQDSGFSTLD 395 (845)
Q Consensus 375 ~lLaaS---------VsiW~~d~~~~~~~~ 395 (845)
+.++.+ +..|..+......+.
T Consensus 375 ~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 375 DDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp SEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred CEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 766644 556655444343343
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.51 E-value=1.1e-11 Score=145.89 Aligned_cols=303 Identities=13% Similarity=0.098 Sum_probs=205.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC--CCcEEEEEcCCCCCeE
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA--VPTVQRTLNGHKSSIT 104 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~--tg~~v~~l~~h~~~V~ 104 (845)
.+.++++...++.|.+||..+++.+.++.. ...+..+.|+|||+++++++.++.|.+||+. +++.+..+.... ...
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~ 243 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EAR 243 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCc
Confidence 445666777889999999999999988873 4467899999999999999999999999996 888888887543 467
Q ss_pred EEEEc----cCCCEEEEEE-CCCeEEEEECCCCceEEEEcCC-----------CCCeEEEEEecCCCE-EEEEeCCCcEE
Q psy467 105 SVDFH----PYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGH-----------SKSINSIRFSPDGQW-IASGGEDGVVR 167 (845)
Q Consensus 105 ~lafs----pdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h-----------~~~V~sLafSPdg~~-Lasgs~DG~I~ 167 (845)
.++|+ |||+++++++ .+++|.++|..+.+.+..+... ...+..+..++++.. ++....+|.|.
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~ 323 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL 323 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence 89999 6999887766 4589999999999988876521 125778888887655 44455668888
Q ss_pred EeeeeccCCceeEEEECCCCccCCC---CCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchh
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPLGT---PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE 244 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l~~---~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~ 244 (845)
+ +|....+.+.. ........+.|+++++++......... +.+.+..+.
T Consensus 324 ~-------------vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~-----V~ViD~~t~----------- 374 (567)
T 1qks_A 324 L-------------VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNK-----LVVIDTKEG----------- 374 (567)
T ss_dssp E-------------EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTE-----EEEEETTTT-----------
T ss_pred E-------------EecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCe-----EEEEECCCC-----------
Confidence 8 77765432110 012345578899999987665443332 222111110
Q ss_pred hhhhccCCCceeEEEcCC-CCcCCCCcccccccCceeEE-EcCCCCcccceEEEEEe-CCCeEEEEECCC-------CeE
Q psy467 245 LFATIANPCDYSAIFQPH-RSLNRSGTCVPVSVSRTSLS-ILPQSPMLCFILTTSSS-ADRTVNFWDLEK-------FSL 314 (845)
Q Consensus 245 l~~~~~~~~~~~l~fspd-g~~~~~~~~~~~~~~I~sla-fSPdg~~~~~~lLatgs-~DG~I~IWDl~s-------~~~ 314 (845)
..+...+- +. .++.. ..+. ++|++.. +++++. .++.|.++|..+ ++.
T Consensus 375 ----------kl~~~i~vgg~-------~Phpg--~g~~~~~p~~g~----v~~t~~~g~~~Vsvid~~~~~~~~~~~kv 431 (567)
T 1qks_A 375 ----------KLVAIEDTGGQ-------TPHPG--RGANFVHPTFGP----VWATSHMGDDSVALIGTDPEGHPDNAWKI 431 (567)
T ss_dssp ----------EEEEEEECSSS-------SBCCT--TCEEEEETTTEE----EEEEEBSSSSEEEEEECCTTTCTTTBTSE
T ss_pred ----------cEEEEEeccCc-------CCCCc--cceeeECCCCCc----EEEeCCCCCCeEEEecCCCCCCccccCEE
Confidence 00111111 11 11111 1222 4676441 455553 468999999988 788
Q ss_pred EEEecCCCCCEEEEEEeCCCCEEEEEeC-------C-CEEEEEecCC-----c-eEEEec--------CCCCCeEEEEEc
Q psy467 315 VSTTEKNSSTIRRLTFSEGGECLLGGDT-------E-GLKVYGWEPA-----R-QYDAQP--------MGWGKVQDLAVT 372 (845)
Q Consensus 315 l~tl~gh~~~VtslafSpdG~~Lasgs~-------D-GI~IWDl~tg-----k-~l~tl~--------~h~~~VtsVafS 372 (845)
+.++......-..+..+|++++|.+... . .|.++|+.+. . .+..+. .....+..+.|+
T Consensus 432 v~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (567)
T 1qks_A 432 LDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFN 511 (567)
T ss_dssp EEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEEC
T ss_pred EEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeEC
Confidence 8888865444455778999999998762 2 3999999876 2 223332 123578999999
Q ss_pred -CCceEEEEEEEEe
Q psy467 373 -GTQLWFRRVGTWS 385 (845)
Q Consensus 373 -dg~lLaaSVsiW~ 385 (845)
+|+.+.+| +|.
T Consensus 512 ~~G~~~~~s--~~~ 523 (567)
T 1qks_A 512 KDGTEVWFS--VWN 523 (567)
T ss_dssp TTSSEEEEE--EEC
T ss_pred CCCCEEEEE--eec
Confidence 99988755 664
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.49 E-value=1.4e-12 Score=156.72 Aligned_cols=244 Identities=12% Similarity=-0.006 Sum_probs=161.1
Q ss_pred cCCCcEEEEEEecCCCCEEEEE-----eCCCeEEEEECCCCeeEEEecCCCCCe--EEEEEcCCCCEEEEEECCCc----
Q psy467 13 AHGASVNCLALGKKSGQVLATG-----GDDKKVNLWALGKSNCIMSLSGHSTPV--ESVQFGNGEETLSAGCQSGS---- 81 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTg-----s~DG~I~IWdl~t~~~i~~l~~h~~~V--~sLafSpdg~~LaSgs~DGt---- 81 (845)
+|...+.+++||| +|++||.+ +.+..|++||+.+++.+. ..+...+ ..++|+|||+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCc
Confidence 4666799999999 99999843 445689999999988641 1122222 67899999999999988776
Q ss_pred ---------EEEEECCCCc----EEEEEcCCCCCeEEEEEccCCCEEEEEECCC----eEEEEECCCCceEEEEcCCCCC
Q psy467 82 ---------IKIWNLAVPT----VQRTLNGHKSSITSVDFHPYGDYLCSGSLDS----FIKLWDLRRKGCIYTYRGHSKS 144 (845)
Q Consensus 82 ---------V~VWDl~tg~----~v~~l~~h~~~V~~lafspdg~~Lasgs~DG----~I~IWDl~t~~~l~~~~~h~~~ 144 (845)
|++|++.++. ++.....+...+..+.|+|||++|+.++.++ .|.+|+..++.. ..+..+...
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~ 273 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGA 273 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSC
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCc
Confidence 9999999876 3333344556788999999999998877665 677777655543 344445555
Q ss_pred eEEEEEecCCCEEEEEeC----CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCC
Q psy467 145 INSIRFSPDGQWIASGGE----DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 145 V~sLafSPdg~~Lasgs~----DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~ 220 (845)
+....+ ++|. ++..+. ++.|.+ ||+.++.... ...+..+...
T Consensus 274 ~~~~~~-~~g~-l~~~s~~~~~~~~l~~-------------~d~~~~~~~~------------------~~~l~~~~~~- 319 (695)
T 2bkl_A 274 KYEVHA-WKDR-FYVLTDEGAPRQRVFE-------------VDPAKPARAS------------------WKEIVPEDSS- 319 (695)
T ss_dssp CEEEEE-ETTE-EEEEECTTCTTCEEEE-------------EBTTBCSGGG------------------CEEEECCCSS-
T ss_pred eEEEEe-cCCc-EEEEECCCCCCCEEEE-------------EeCCCCCccC------------------CeEEecCCCC-
Confidence 666666 5666 444443 456666 8887654200 0111111100
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA 300 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~ 300 (845)
..+ ..+.++ ++. ++++...
T Consensus 320 ----~~l---------------------------~~~~~~-~~~-----------------------------lv~~~~~ 338 (695)
T 2bkl_A 320 ----ASL---------------------------LSVSIV-GGH-----------------------------LSLEYLK 338 (695)
T ss_dssp ----CEE---------------------------EEEEEE-TTE-----------------------------EEEEEEE
T ss_pred ----CeE---------------------------EEEEEE-CCE-----------------------------EEEEEEE
Confidence 001 223333 333 8888888
Q ss_pred CCeEEEEECC-CCeEEEEecCC-CCCEEEEEEeCCCCEEEEEeC----CC-EEEEEecCCce
Q psy467 301 DRTVNFWDLE-KFSLVSTTEKN-SSTIRRLTFSEGGECLLGGDT----EG-LKVYGWEPARQ 355 (845)
Q Consensus 301 DG~I~IWDl~-s~~~l~tl~gh-~~~VtslafSpdG~~Lasgs~----DG-I~IWDl~tgk~ 355 (845)
|+..+||.+. +++....+..+ .+.+..++++|+++.|+.... .+ |++||+.+++.
T Consensus 339 dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 339 DATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp TTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 9988887654 45566666654 567888999999987764332 23 89999988763
No 191
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.48 E-value=2.6e-11 Score=132.31 Aligned_cols=255 Identities=10% Similarity=-0.013 Sum_probs=176.1
Q ss_pred CCCeEEEEECCCCeeEEEec------CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEc
Q psy467 36 DDKKVNLWALGKSNCIMSLS------GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFH 109 (845)
Q Consensus 36 ~DG~I~IWdl~t~~~i~~l~------~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafs 109 (845)
.++.|.+||.++++....+. ........+++. ++...++...++.|.+||..+++.+.++. .......++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 37899999999988765441 123456788885 34455555567999999999999988886 34668899999
Q ss_pred cCCCEEEEEE-CCCeEEEEECCCCceEEEEcCCC-----CCeEEEEEecCCCEEEEEe--CCCcEEEeeeeccCCceeEE
Q psy467 110 PYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGHS-----KSINSIRFSPDGQWIASGG--EDGVVRIGASFHLTNTSIHV 181 (845)
Q Consensus 110 pdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h~-----~~V~sLafSPdg~~Lasgs--~DG~I~I~~~~~~~~~~I~v 181 (845)
++++ ++++. .++.|.+||..+++....+.... .....+++ ++..++++. .++.|.+
T Consensus 93 ~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~v------------- 156 (328)
T 3dsm_A 93 SDEK-AYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILK------------- 156 (328)
T ss_dssp ETTE-EEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEE-------------
T ss_pred CCCe-EEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEE-------------
Confidence 9984 55555 88999999999998887776433 14567777 345555554 4788888
Q ss_pred EECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcC
Q psy467 182 VDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQP 261 (845)
Q Consensus 182 WDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fsp 261 (845)
||..+++. +..+...... ..+
T Consensus 157 iD~~t~~~--------------------~~~i~~g~~p-----------------------------------~~i---- 177 (328)
T 3dsm_A 157 IDTETDKV--------------------VDELTIGIQP-----------------------------------TSL---- 177 (328)
T ss_dssp EETTTTEE--------------------EEEEECSSCB-----------------------------------CCC----
T ss_pred EECCCCeE--------------------EEEEEcCCCc-----------------------------------cce----
Confidence 99988776 3332211111 233
Q ss_pred CCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCC----------CeEEEEECCCCeEEEEecCC-CCCEEEEEE
Q psy467 262 HRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD----------RTVNFWDLEKFSLVSTTEKN-SSTIRRLTF 330 (845)
Q Consensus 262 dg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D----------G~I~IWDl~s~~~l~tl~gh-~~~Vtslaf 330 (845)
+++|+|+ +++++..+ +.|.+||..+++....+... ......++|
T Consensus 178 --------------------~~~~dG~-----l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~ 232 (328)
T 3dsm_A 178 --------------------VMDKYNK-----MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQL 232 (328)
T ss_dssp --------------------EECTTSE-----EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEE
T ss_pred --------------------EEcCCCC-----EEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEE
Confidence 4444444 66665544 78999999999888777532 246899999
Q ss_pred eCCCCEEEEEeCCCEEEEEecCCceEE--EecCCCCCeEEEEEc--CCceEEEE---------EEEEeeCCCCCcc
Q psy467 331 SEGGECLLGGDTEGLKVYGWEPARQYD--AQPMGWGKVQDLAVT--GTQLWFRR---------VGTWSHQDSGFST 393 (845)
Q Consensus 331 SpdG~~Lasgs~DGI~IWDl~tgk~l~--tl~~h~~~VtsVafS--dg~lLaaS---------VsiW~~d~~~~~~ 393 (845)
+|+++.|+++.. .|.+||..+++... .+..+.....+++++ +++++++. |.+|..+++.+..
T Consensus 233 ~~d~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~ 307 (328)
T 3dsm_A 233 NGTRDTLYWINN-DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDE 307 (328)
T ss_dssp CTTSCEEEEESS-SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEE
T ss_pred ecCCCEEEEEcc-EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEE
Confidence 999999988766 68999998887542 122224678999998 45555542 6677666554433
No 192
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.47 E-value=1.6e-11 Score=133.86 Aligned_cols=251 Identities=10% Similarity=0.017 Sum_probs=170.9
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~ 95 (845)
.....+++. ++.++++...++.|.+||..+++.+.++. .......+++++++...++...++.|.+||..+++....
T Consensus 44 ~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~ 120 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGY 120 (328)
T ss_dssp SCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEE
T ss_pred ccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEE
Confidence 346778884 45666666678999999999999988886 456789999999885444443789999999999998877
Q ss_pred EcCCC-----CCeEEEEEccCCCEEEEEE--CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC-----
Q psy467 96 LNGHK-----SSITSVDFHPYGDYLCSGS--LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED----- 163 (845)
Q Consensus 96 l~~h~-----~~V~~lafspdg~~Lasgs--~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D----- 163 (845)
+.... .....+++ ++..+++++ .++.|.+||+.+++.+..+... .....++++|+|++++++..+
T Consensus 121 i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp EECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCS
T ss_pred EEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCc
Confidence 76433 14556777 355555555 4889999999999988887643 346789999999876665543
Q ss_pred -----CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccc
Q psy467 164 -----GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238 (845)
Q Consensus 164 -----G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~ 238 (845)
+.|.+ ||..+++. ...+....
T Consensus 198 ~~~~~~~v~~-------------id~~t~~v--------------------~~~~~~~~--------------------- 223 (328)
T 3dsm_A 198 YGYEAPSLYR-------------IDAETFTV--------------------EKQFKFKL--------------------- 223 (328)
T ss_dssp SCBCCCEEEE-------------EETTTTEE--------------------EEEEECCT---------------------
T ss_pred cccCCceEEE-------------EECCCCeE--------------------EEEEecCC---------------------
Confidence 56777 89877665 32222100
Q ss_pred cccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE-
Q psy467 239 QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST- 317 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t- 317 (845)
+ .....++|+|+++ .|.++.. .|.+||..+++....
T Consensus 224 ------------------------g------------~~p~~la~~~d~~-----~lyv~~~--~v~~~d~~t~~~~~~~ 260 (328)
T 3dsm_A 224 ------------------------G------------DWPSEVQLNGTRD-----TLYWINN--DIWRMPVEADRVPVRP 260 (328)
T ss_dssp ------------------------T------------CCCEEEEECTTSC-----EEEEESS--SEEEEETTCSSCCSSC
T ss_pred ------------------------C------------CCceeEEEecCCC-----EEEEEcc--EEEEEECCCCceeeee
Confidence 0 0123444444444 6666544 899999988775321
Q ss_pred -ecCCCCCEEEEEEeCC-CCEEEEE----eCCC-EEEEEecCCceEEEecCCCCCeEEEEE
Q psy467 318 -TEKNSSTIRRLTFSEG-GECLLGG----DTEG-LKVYGWEPARQYDAQPMGWGKVQDLAV 371 (845)
Q Consensus 318 -l~gh~~~VtslafSpd-G~~Lasg----s~DG-I~IWDl~tgk~l~tl~~h~~~VtsVaf 371 (845)
+..+......++++|+ +.+.++. ..++ |.+||.+ ++.+.++.. ......++|
T Consensus 261 ~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~~~~~ 319 (328)
T 3dsm_A 261 FLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPGAFCW 319 (328)
T ss_dssp SBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEEEEEE
T ss_pred eecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcceEEE
Confidence 1112356899999995 5444444 3556 9999998 888887753 233455554
No 193
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.46 E-value=3.1e-10 Score=119.40 Aligned_cols=267 Identities=7% Similarity=-0.025 Sum_probs=181.3
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEE-EecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIM-SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~-~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg 90 (845)
......+.++++.+ +|+++++...++.|.+|+.. ++... .+..+...+.+++++++++..++...++.|..||.. +
T Consensus 16 ~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 16 SIPDSGPYGITSSE-DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp SSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCCCCcceeeECC-CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 34567899999999 88888877778999999987 55433 233344679999999999877776667899999988 6
Q ss_pred cEEE-EEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE-EcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 91 TVQR-TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 91 ~~v~-~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~-~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
+... .+......+.++++.++++++++...++.|..||.. ++.... +......+.+++++++|+++++...++.|..
T Consensus 93 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 171 (300)
T 2qc5_A 93 GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGR 171 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred CeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEE
Confidence 5432 222234678999999999877777668899999987 554422 2334567899999999996666655677887
Q ss_pred eeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhh
Q psy467 169 GASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248 (845)
Q Consensus 169 ~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~ 248 (845)
||. +++. .. +.....
T Consensus 172 -------------~~~-~g~~--------------------~~-~~~~~~------------------------------ 186 (300)
T 2qc5_A 172 -------------ITN-TGKL--------------------EE-YPLPTN------------------------------ 186 (300)
T ss_dssp -------------ECT-TCCE--------------------EE-EECSST------------------------------
T ss_pred -------------ECC-CCcE--------------------EE-eeCCCC------------------------------
Confidence 776 3332 11 110000
Q ss_pred ccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE-ecCCCCCEEE
Q psy467 249 IANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST-TEKNSSTIRR 327 (845)
Q Consensus 249 ~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t-l~gh~~~Vts 327 (845)
...+..+++.++|. ++++....+.|.+||. +++.... +..+...+.+
T Consensus 187 --------------------------~~~~~~i~~d~~g~-----l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~ 234 (300)
T 2qc5_A 187 --------------------------AAAPVGITSGNDGA-----LWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHA 234 (300)
T ss_dssp --------------------------TCCEEEEEECTTSS-----EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEE
T ss_pred --------------------------CCCcceEEECCCCC-----EEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceE
Confidence 01123344444444 6777666788999998 4544332 3344567899
Q ss_pred EEEeCCCCEEEEEeCCC-EEEEEecCCceEE-EecCCCCCeEEEEEc-CCceEEEE
Q psy467 328 LTFSEGGECLLGGDTEG-LKVYGWEPARQYD-AQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 328 lafSpdG~~Lasgs~DG-I~IWDl~tgk~l~-tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
++++++|++.++...++ |..|+. +++... .+......+.+++++ +|++++++
T Consensus 235 i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 235 ITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFAL 289 (300)
T ss_dssp EEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEEC
T ss_pred EEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEc
Confidence 99999998666665556 999997 444332 233345678899998 77765543
No 194
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.44 E-value=3.8e-11 Score=127.86 Aligned_cols=249 Identities=8% Similarity=0.023 Sum_probs=165.0
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEE-------EeCCCeEEEEECCCCeeEEEec----CCCCCeEEEEEcCC-CCEEEEE
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLAT-------GGDDKKVNLWALGKSNCIMSLS----GHSTPVESVQFGNG-EETLSAG 76 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaT-------gs~DG~I~IWdl~t~~~i~~l~----~h~~~V~sLafSpd-g~~LaSg 76 (845)
..+...-....+++|++ ++.++++ +..++.|.+|+..+++...... ++...+.+++++++ ++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~- 88 (314)
T 1pjx_A 11 TKVTEDIPGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA- 88 (314)
T ss_dssp EEEECCCTTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE-
T ss_pred hhhhccCCCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE-
Confidence 34455556788999998 8888887 5678899999987776543222 24567999999999 654444
Q ss_pred ECCCcEEEEECCCCcEEEE-EcC----CCCCeEEEEEccCCCEEEEEECC---------------CeEEEEECCCCceEE
Q psy467 77 CQSGSIKIWNLAVPTVQRT-LNG----HKSSITSVDFHPYGDYLCSGSLD---------------SFIKLWDLRRKGCIY 136 (845)
Q Consensus 77 s~DGtV~VWDl~tg~~v~~-l~~----h~~~V~~lafspdg~~Lasgs~D---------------G~I~IWDl~t~~~l~ 136 (845)
+..+.|.+||.+ ++.... ... ....+.+++++++|+++++...+ +.|..||.. ++...
T Consensus 89 ~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 89 DMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp ETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE
T ss_pred ECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE
Confidence 445589999998 765433 221 12347899999999877776654 567777765 55433
Q ss_pred EEcCCCCCeEEEEEe----cCCCEEEEE-eCCCcEEEeeeeccCCceeEEEECC-CCccCCCCCCCCCcceeecCCCCeE
Q psy467 137 TYRGHSKSINSIRFS----PDGQWIASG-GEDGVVRIGASFHLTNTSIHVVDLS-LVHPLGTPPPQYTSSVPFSHNTSLR 210 (845)
Q Consensus 137 ~~~~h~~~V~sLafS----Pdg~~Lasg-s~DG~I~I~~~~~~~~~~I~vWDl~-tg~~l~~~~~~~i~svs~spdg~~l 210 (845)
.. .+......++|+ |+++.++++ ..++.|.+ ||.. ++.... ....
T Consensus 167 ~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~-------------~~~~~~g~~~~---------------~~~~ 217 (314)
T 1pjx_A 167 VD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWS-------------YDIKGPAKIEN---------------KKVW 217 (314)
T ss_dssp EE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEE-------------EEEEETTEEEE---------------EEEE
T ss_pred ec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEE-------------EECCCCCcccc---------------ceEE
Confidence 32 233457889999 999766555 45678888 8765 222100 0000
Q ss_pred EEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcc
Q psy467 211 KSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPML 290 (845)
Q Consensus 211 ~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~ 290 (845)
..+..+. ......++++++|+
T Consensus 218 ~~~~~~~---------------------------------------------------------~~~p~~i~~d~~G~-- 238 (314)
T 1pjx_A 218 GHIPGTH---------------------------------------------------------EGGADGMDFDEDNN-- 238 (314)
T ss_dssp EECCCCS---------------------------------------------------------SCEEEEEEEBTTCC--
T ss_pred EECCCCC---------------------------------------------------------CCCCCceEECCCCC--
Confidence 0000000 01123455555555
Q ss_pred cceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCC-C-EEEEEecC
Q psy467 291 CFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-G-LKVYGWEP 352 (845)
Q Consensus 291 ~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~D-G-I~IWDl~t 352 (845)
++++...++.|.+||..+++.+..+..+...+.+++|+++|+.|++++.+ + |..|++..
T Consensus 239 ---l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 239 ---LLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp ---EEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred ---EEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 77777788999999998777666666666789999999999977666554 5 88888765
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.43 E-value=4.1e-10 Score=125.63 Aligned_cols=248 Identities=10% Similarity=-0.019 Sum_probs=167.6
Q ss_pred EEEEecCCCCEEEEEe----------CCCeEEEEECCCCeeEEEecCC-------CCCeEEEEEcCCCCEEEEEEC--CC
Q psy467 20 CLALGKKSGQVLATGG----------DDKKVNLWALGKSNCIMSLSGH-------STPVESVQFGNGEETLSAGCQ--SG 80 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs----------~DG~I~IWdl~t~~~i~~l~~h-------~~~V~sLafSpdg~~LaSgs~--DG 80 (845)
.++++| +|++++++. .++.|.+||..+.+.+.++.-. ......++|+|||++|++++. ++
T Consensus 70 ~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~ 148 (373)
T 2mad_H 70 NPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP 148 (373)
T ss_pred CeEECC-CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCC
Confidence 899999 899888886 3678999999988887766422 123568999999999998874 57
Q ss_pred cEEEEECCCCcEEEE-EcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCCCceEEEEc-----CCCCC-eEEEEEec
Q psy467 81 SIKIWNLAVPTVQRT-LNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYR-----GHSKS-INSIRFSP 152 (845)
Q Consensus 81 tV~VWDl~tg~~v~~-l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t~~~l~~~~-----~h~~~-V~sLafSP 152 (845)
.|.++| .+++.+.. +... . |+.+.|++ +.+++.+.||.+.++|. +++...... ....+ .....+.+
T Consensus 149 ~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 149 AVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred eEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe
Confidence 899999 99998888 6532 2 24555665 45667778999999999 877663322 11112 12345666
Q ss_pred CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecc
Q psy467 153 DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232 (845)
Q Consensus 153 dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~ 232 (845)
++..++..+.++.+.+ .|+...... .+..+...... .
T Consensus 223 ~~~~~~~~~~~~~v~v-------------id~~~~~~~------------------v~~~~~~~~~~-------~----- 259 (373)
T 2mad_H 223 KSGRIVWPVYSGKILQ-------------ADISAAGAT------------------NKAPIDALSGG-------R----- 259 (373)
T ss_pred cCCEEEEEcCCceEEE-------------EeccCCcce------------------EeeeeeecCCc-------c-----
Confidence 6655554456777777 887654320 01111100000 0
Q ss_pred cccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC----------CC
Q psy467 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA----------DR 302 (845)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~----------DG 302 (845)
....|.|.+. ..++++||++ .+.++.. .+
T Consensus 260 ----------------------~~~~~~p~g~--------------~~~~~s~d~~-----~lyV~~~~~~~~~~~~~~~ 298 (373)
T 2mad_H 260 ----------------------KADTWRPGGW--------------QQVAYLKSSD-----GIYLLTSEQSAWKLHAAAK 298 (373)
T ss_pred ----------------------cccceecCce--------------EeEEECCCCC-----EEEEEeccCCcccccCCCC
Confidence 1223344432 3456677766 4444332 35
Q ss_pred eEEEEECCCCeEEEEecCCCCCEEEEEEeCCCC-EEEEEe-CCC-EEEEEecCCceEEEe
Q psy467 303 TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE-CLLGGD-TEG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 303 ~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~-~Lasgs-~DG-I~IWDl~tgk~l~tl 359 (845)
.|.++|+.+++.+.++.. .....+++|+|||+ .++++. .++ |.+||..+++.+..+
T Consensus 299 ~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 299 EVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred eEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 899999999999998864 34689999999999 777776 366 999999999998874
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.42 E-value=2.9e-11 Score=129.20 Aligned_cols=216 Identities=14% Similarity=0.052 Sum_probs=162.3
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEEEEcCCC-CCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCC-CCeE
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK-SSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS-KSIN 146 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~-~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~-~~V~ 146 (845)
.++.|++++.++.|.+||.++|+.+.++..+. ..+.++.++|+|++++ +.++.|..||. +++.+..+..+. ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 46789999999999999999999999998765 4789999999999888 45788999999 899999998653 4788
Q ss_pred EEEEecCCCEEEEEeC-CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCcccee
Q psy467 147 SIRFSPDGQWIASGGE-DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKI 225 (845)
Q Consensus 147 sLafSPdg~~Lasgs~-DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i 225 (845)
++.+.++|+++++.+. ++.+.. +|. +++. +..+......
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~-------------vd~-~Gk~--------------------l~~~~~~~~~------ 120 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILE-------------VNM-KGEV--------------------LSKTEFETGI------ 120 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEE-------------ECT-TSCE--------------------EEEEEECCSC------
T ss_pred ccEECCCCCEEEEecCCCCEEEE-------------EeC-CCCE--------------------EEEEeccCCC------
Confidence 9999999999998877 666665 553 3443 4333211000
Q ss_pred eEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEE
Q psy467 226 DVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVN 305 (845)
Q Consensus 226 ~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~ 305 (845)
. ........+++.++|+ ++++...++.|.
T Consensus 121 --------------------------------------~--------~~~~~~~~v~~~~~G~-----~lv~~~~~~~v~ 149 (276)
T 3no2_A 121 --------------------------------------E--------RPHAQFRQINKNKKGN-----YLVPLFATSEVR 149 (276)
T ss_dssp --------------------------------------S--------SGGGSCSCCEECTTSC-----EEEEETTTTEEE
T ss_pred --------------------------------------C--------cccccccCceECCCCC-----EEEEecCCCEEE
Confidence 0 0001122334455555 899999999999
Q ss_pred EEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCC------CCeEEEEEc-CCceE
Q psy467 306 FWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGW------GKVQDLAVT-GTQLW 377 (845)
Q Consensus 306 IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~------~~VtsVafS-dg~lL 377 (845)
.||.. ++.+.++..+ ..+.++.+.++|..+++++.++ |..+|.++|+.+..+..+. ..+..++.. +|.++
T Consensus 150 ~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~ 227 (276)
T 3no2_A 150 EIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLY 227 (276)
T ss_dssp EECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEE
T ss_pred EECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEE
Confidence 99998 9999998864 4566788899999999998888 9999999999987775432 236777777 77776
Q ss_pred EEE
Q psy467 378 FRR 380 (845)
Q Consensus 378 aaS 380 (845)
+++
T Consensus 228 v~~ 230 (276)
T 3no2_A 228 ICN 230 (276)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.41 E-value=4.6e-11 Score=124.50 Aligned_cols=230 Identities=7% Similarity=-0.028 Sum_probs=152.0
Q ss_pred CeEEEEEcCCCCEEE-EEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE
Q psy467 60 PVESVQFGNGEETLS-AGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY 138 (845)
Q Consensus 60 ~V~sLafSpdg~~La-Sgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~ 138 (845)
...+++++++++.++ +.+.++.|.+||..++........+...+.+++++++++.+++.. ++.|.+||...... ..+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EEC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eee
Confidence 788999999998776 446788999999876543322223335678999999998555554 88999999875543 333
Q ss_pred c-CCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCC
Q psy467 139 R-GHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGR 217 (845)
Q Consensus 139 ~-~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~ 217 (845)
. .....+.+++++++|+++++...++.|.+ |+..+... .......
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~-------------~~~~~~~~--------------------~~~~~~~- 148 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVK-------------LAAGSKTQ--------------------TVLPFTG- 148 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEE-------------ECTTCCSC--------------------EECCCCS-
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEE-------------EECCCcee--------------------Eeecccc-
Confidence 2 23357899999999997777767788888 76443222 1000000
Q ss_pred CCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEE
Q psy467 218 PGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTS 297 (845)
Q Consensus 218 ~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLat 297 (845)
...+..++++++|+ ++++
T Consensus 149 ---------------------------------------------------------~~~p~~i~~~~~g~-----l~v~ 166 (270)
T 1rwi_B 149 ---------------------------------------------------------LNDPDGVAVDNSGN-----VYVT 166 (270)
T ss_dssp ---------------------------------------------------------CCSCCCEEECTTCC-----EEEE
T ss_pred ---------------------------------------------------------CCCceeEEEeCCCC-----EEEE
Confidence 01123344444444 7777
Q ss_pred EeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCc
Q psy467 298 SSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQ 375 (845)
Q Consensus 298 gs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~ 375 (845)
...++.|.+||............+...+.+++++++|.+.++...++ |.+|+............+...+.+++++ +|+
T Consensus 167 ~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~ 246 (270)
T 1rwi_B 167 DTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRT 246 (270)
T ss_dssp EGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCC
T ss_pred ECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCC
Confidence 77788999999987765544334446789999999997777666666 9999987654433222344679999999 888
Q ss_pred eEEEE-----EEEEeeC
Q psy467 376 LWFRR-----VGTWSHQ 387 (845)
Q Consensus 376 lLaaS-----VsiW~~d 387 (845)
++++. |.++..+
T Consensus 247 l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 247 VYVADRGNDRVVKLTSL 263 (270)
T ss_dssp EEEEEGGGTEEEEECCC
T ss_pred EEEEECCCCEEEEEcCC
Confidence 66665 6666543
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.41 E-value=7.2e-10 Score=116.47 Aligned_cols=240 Identities=9% Similarity=0.009 Sum_probs=163.3
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee-EEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC-IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~-i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~ 91 (845)
.+...+.++++++ +|.++++...++.|..|+.. ++. ...+......+.++++++++..+++...++.|.+||. +++
T Consensus 54 ~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 54 TPDAKVMCLTISS-DGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp STTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC
T ss_pred cccCceeeEEECC-CCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC
Confidence 3457899999998 88888877778899999976 332 2222235567999999999988887767889999999 555
Q ss_pred EEEE-EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE-EcCCCCCeEEEEEecCCCEEEEEeCCCcEEEe
Q psy467 92 VQRT-LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169 (845)
Q Consensus 92 ~v~~-l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~-~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~ 169 (845)
.... .......+.++++.++|+.+++...++.|..||. +++.... .......+.+++++++|+++++...++.|..
T Consensus 131 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~- 208 (299)
T 2z2n_A 131 IREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGR- 208 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE-
T ss_pred EEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEE-
Confidence 4433 2334567899999999987777767789999998 6665433 2334456889999999987766666778888
Q ss_pred eeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhc
Q psy467 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATI 249 (845)
Q Consensus 170 ~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~ 249 (845)
||. ++.. . .+.....
T Consensus 209 ------------~~~-~g~~--------------------~-~~~~~~~------------------------------- 223 (299)
T 2z2n_A 209 ------------ITT-SGEI--------------------T-EFKIPTP------------------------------- 223 (299)
T ss_dssp ------------ECT-TCCE--------------------E-EEECSST-------------------------------
T ss_pred ------------ECC-CCcE--------------------E-EEECCCC-------------------------------
Confidence 887 4433 1 1100000
Q ss_pred cCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEE-ecCCCCCEEEE
Q psy467 250 ANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST-TEKNSSTIRRL 328 (845)
Q Consensus 250 ~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~t-l~gh~~~Vtsl 328 (845)
...+.+++++++|+ ++++...++.|..||. +++.... +..+...+.++
T Consensus 224 -------------------------~~~~~~i~~~~~g~-----l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i 272 (299)
T 2z2n_A 224 -------------------------NARPHAITAGAGID-----LWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGI 272 (299)
T ss_dssp -------------------------TCCEEEEEECSTTC-----EEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEE
T ss_pred -------------------------CCCceeEEECCCCC-----EEEeccCCceEEEECC-CCceEEEeCCCCCCccceE
Confidence 01223444444444 6777667889999998 4543322 33445679999
Q ss_pred EEeCCCCEEEEEeCCCEEEEEecCCc
Q psy467 329 TFSEGGECLLGGDTEGLKVYGWEPAR 354 (845)
Q Consensus 329 afSpdG~~Lasgs~DGI~IWDl~tgk 354 (845)
++ ++|.+.++...++|..++.++++
T Consensus 273 ~~-~~g~l~v~~~~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 273 CF-DGETIWFAMECDKIGKLTLIKDN 297 (299)
T ss_dssp EE-CSSCEEEEETTTEEEEEEEC---
T ss_pred Ee-cCCCEEEEecCCcEEEEEcCccc
Confidence 99 88887777665557778876643
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.41 E-value=4.6e-11 Score=144.79 Aligned_cols=255 Identities=12% Similarity=0.126 Sum_probs=162.1
Q ss_pred cCCCCEEEEEeCCC---eEEEEE--CC---CCeeEEEe------cCCCCCeEEEEEcCCCCEEEEEECC-----CcEEEE
Q psy467 25 KKSGQVLATGGDDK---KVNLWA--LG---KSNCIMSL------SGHSTPVESVQFGNGEETLSAGCQS-----GSIKIW 85 (845)
Q Consensus 25 p~dg~~LaTgs~DG---~I~IWd--l~---t~~~i~~l------~~h~~~V~sLafSpdg~~LaSgs~D-----GtV~VW 85 (845)
| +|++++....++ .-.+|. .. .++....+ .+|...+..++|||||++||.++.+ ..|++|
T Consensus 116 p-dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 116 R-RGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp E-ETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred E-ECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 6 788877665433 244554 33 33332222 2233468899999999999887653 469999
Q ss_pred ECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCe--------------EEEEECCCCce--EEEEc--CCCCCeEE
Q psy467 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF--------------IKLWDLRRKGC--IYTYR--GHSKSINS 147 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~--------------I~IWDl~t~~~--l~~~~--~h~~~V~s 147 (845)
|+.+++.+.... +...+..++|+|| +.|+.++.++. |++|++.++.. ...+. .+...+..
T Consensus 195 dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 195 GVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp ETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred ECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 999998765321 2222357899999 99988876654 89999977652 22232 23345889
Q ss_pred EEEecCCCEEEEEeCCC-----cEEEeeeeccCCceeEEEECCCC--ccCCCCCCCCCcceeecCCCCeEEEEecCCCCC
Q psy467 148 IRFSPDGQWIASGGEDG-----VVRIGASFHLTNTSIHVVDLSLV--HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 148 LafSPdg~~Lasgs~DG-----~I~I~~~~~~~~~~I~vWDl~tg--~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~ 220 (845)
+.|+|||++|+..+.++ .|++ ||+.++ .. ...+..+...
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~-------------~d~~~~~~~~--------------------~~~l~~~~~~- 318 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHV-------------ARVTNGKIGP--------------------VTALIPDLKA- 318 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEE-------------EEEETTEECC--------------------CEEEECSSSS-
T ss_pred EEECCCCCEEEEEEEccCCCcceEEE-------------EECCCCCCcc--------------------cEEecCCCCc-
Confidence 99999999988877544 5555 888765 31 1112222111
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA 300 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~ 300 (845)
. ... +++++. .|+..+.
T Consensus 319 ------~---------------------------~~~-~~~dg~-----------------------------~l~~~s~ 335 (741)
T 1yr2_A 319 ------Q---------------------------WDF-VDGVGD-----------------------------QLWFVSG 335 (741)
T ss_dssp ------C---------------------------EEE-EEEETT-----------------------------EEEEEEC
T ss_pred ------e---------------------------EEE-EeccCC-----------------------------EEEEEEC
Confidence 1 111 224544 5555554
Q ss_pred ----CCeEEEEECCCC--eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEec-CCceEEEecC-CCCCeEEEEE
Q psy467 301 ----DRTVNFWDLEKF--SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWE-PARQYDAQPM-GWGKVQDLAV 371 (845)
Q Consensus 301 ----DG~I~IWDl~s~--~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~-tgk~l~tl~~-h~~~VtsVaf 371 (845)
++.|.+||+.++ .....+..+...+..++|+ ++.++++...|+ .+||.++ +++....+.. +.+.|..+++
T Consensus 336 ~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~ 414 (741)
T 1yr2_A 336 DGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSG 414 (741)
T ss_dssp TTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEEC
T ss_pred CCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeec
Confidence 456999999874 4444455555567778888 667788888888 7777665 4666666665 3677889999
Q ss_pred c-CCceEEEE
Q psy467 372 T-GTQLWFRR 380 (845)
Q Consensus 372 S-dg~lLaaS 380 (845)
+ +++.++.+
T Consensus 415 s~d~~~l~~~ 424 (741)
T 1yr2_A 415 RPGDRHAYLS 424 (741)
T ss_dssp CBTCSCEEEE
T ss_pred CCCCCEEEEE
Confidence 9 77766544
No 200
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.40 E-value=2.5e-10 Score=127.46 Aligned_cols=299 Identities=11% Similarity=0.036 Sum_probs=185.0
Q ss_pred EEEecCCCCEEEEEeC-----CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE----------CCCcEEEE
Q psy467 21 LALGKKSGQVLATGGD-----DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC----------QSGSIKIW 85 (845)
Q Consensus 21 LafSp~dg~~LaTgs~-----DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs----------~DGtV~VW 85 (845)
....| +++.+++... ++.|.++|..+++.+.++.....+ . ++++|||+++++++ .++.|.+|
T Consensus 38 ~~~~p-d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 38 EAPAP-DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCC-CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccCC-CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 34456 7888887765 679999999999999988765555 4 99999999887775 36789999
Q ss_pred ECCCCcEEEEEcCCC-------CCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCE
Q psy467 86 NLAVPTVQRTLNGHK-------SSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~-------~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~ 156 (845)
|..+++.+..+.... ..-..++|+|||++++++.. ++.|.++|+.+++.+.++... + . ...+....+.
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g-~-~~~~P~g~~~ 191 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-D-C-YHIFPTAPDT 191 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-S-E-EEEEEEETTE
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-C-c-ceeecCCCce
Confidence 999999988875321 24567999999999988874 689999999999999888532 2 1 2233334556
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCC-CccCC----CCC--CCCCc-ceee-cCCCCeEEEEecCCCCCccceeeE
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSL-VHPLG----TPP--PQYTS-SVPF-SHNTSLRKSFTKGRPGGTKAKIDV 227 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~t-g~~l~----~~~--~~~i~-svs~-spdg~~l~~~~~h~~~~~~~~i~V 227 (845)
+++.+.||.+.+ .++.+ ++... .+. ...+. ...| .++|+++.. .. .. .+.+
T Consensus 192 ~~~~~~DG~~~~-------------v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~v-s~-~g-----~V~v 251 (386)
T 3sjl_D 192 FFMHCRDGSLAK-------------VAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWP-TY-TG-----KIHQ 251 (386)
T ss_dssp EEEEETTSCEEE-------------EECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEE-BT-TS-----EEEE
T ss_pred eEEECCCCCEEE-------------EECCCCCeEEEeecceeccccccccccceeEcCCCcEEEE-eC-CC-----EEEE
Confidence 777788888877 56554 33210 000 01111 1233 245543321 11 11 1111
Q ss_pred eeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeC-------
Q psy467 228 TRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA------- 300 (845)
Q Consensus 228 ~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~------- 300 (845)
.+...... .......++... .....|.|. ....++++++++ .+.....
T Consensus 252 ~d~~~~~~--~v~~~~~~~~~~----~~~~g~~p~--------------g~q~~a~~~~~~-----~lyV~~~~~~~~~h 306 (386)
T 3sjl_D 252 IDLSSGDA--KFLPAVEALTEA----ERADGWRPG--------------GWQQVAYHRALD-----RIYLLVDQRDEWRH 306 (386)
T ss_dssp EECTTSSC--EECCCEESSCHH----HHHTTEEEC--------------SSSCEEEETTTT-----EEEEEEEECCTTCT
T ss_pred EECCCCcc--eeecceeccccc----cccccccCC--------------CcceeeECCCCC-----eEEEEecccccccc
Confidence 11100000 000000000000 000002222 224567777777 3433321
Q ss_pred ---CCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCC-EEEEEeC-CC-EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 301 ---DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE-CLLGGDT-EG-LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 301 ---DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~-~Lasgs~-DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
.+.|.++|+.+++.+.++.. ...+..+++++|++ .|+++.. ++ |.++|..+++.+.++... +....+.++
T Consensus 307 k~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s 382 (386)
T 3sjl_D 307 KTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITT 382 (386)
T ss_dssp TSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEE
T ss_pred CCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEEC
Confidence 25799999999999998874 23688999999997 7777654 66 999999999999888643 333444444
No 201
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.40 E-value=3e-10 Score=133.62 Aligned_cols=297 Identities=11% Similarity=0.076 Sum_probs=191.5
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECC--CCeeEEEecCCCCCeEEEEEc----CCCCEEEEEEC-CCcEEEEEC
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALG--KSNCIMSLSGHSTPVESVQFG----NGEETLSAGCQ-SGSIKIWNL 87 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~--t~~~i~~l~~h~~~V~sLafS----pdg~~LaSgs~-DGtV~VWDl 87 (845)
...+.+++|+| +|+++++++.|+.|.+||+. +++.+.++... .....++|+ |||+++++++. +++|.++|.
T Consensus 196 g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~ 273 (567)
T 1qks_A 196 GYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG 273 (567)
T ss_dssp SSCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred CCCccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence 34577999999 99999999999999999995 78888887743 346899999 69999887765 699999999
Q ss_pred CCCcEEEEEcCC-----------CCCeEEEEEccCCCEE-EEEECCCeEEEEECCCCceE--EEEcCCCCCeEEEEEecC
Q psy467 88 AVPTVQRTLNGH-----------KSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRRKGCI--YTYRGHSKSINSIRFSPD 153 (845)
Q Consensus 88 ~tg~~v~~l~~h-----------~~~V~~lafspdg~~L-asgs~DG~I~IWDl~t~~~l--~~~~~h~~~V~sLafSPd 153 (845)
.+.+.+..+... ...+..+..++++..+ +....+|.|.++|..+.+.+ ..+. ......++.|+|+
T Consensus 274 ~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pd 352 (567)
T 1qks_A 274 ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGS 352 (567)
T ss_dssp TTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTT
T ss_pred CCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECCC
Confidence 999998877532 2257788889887655 44556799999999765432 2222 3446778999999
Q ss_pred CCEEEEEe-CCCcEEEeeeeccCCceeEEEECCCCccCCCCCC-----CCCccee-ecCCCCeEEEEecCCCCCccceee
Q psy467 154 GQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPP-----QYTSSVP-FSHNTSLRKSFTKGRPGGTKAKID 226 (845)
Q Consensus 154 g~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~-----~~i~svs-~spdg~~l~~~~~h~~~~~~~~i~ 226 (845)
|++++++. .++.|.+ +|+.+++....... ...+... ++|++..+.. ..+... ..+.
T Consensus 353 gr~~~va~~~sn~V~V-------------iD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~-t~~~g~---~~Vs 415 (567)
T 1qks_A 353 HRYFITAANARNKLVV-------------IDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWA-TSHMGD---DSVA 415 (567)
T ss_dssp SCEEEEEEGGGTEEEE-------------EETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEE-EEBSSS---SEEE
T ss_pred CCEEEEEeCCCCeEEE-------------EECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEE-eCCCCC---CeEE
Confidence 99987765 5678888 99988876322211 1112222 3565443332 122111 0111
Q ss_pred EeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccc-cCceeEEEcCCCCcccceEEEEEeC-----
Q psy467 227 VTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVS-VSRTSLSILPQSPMLCFILTTSSSA----- 300 (845)
Q Consensus 227 V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~-~~I~slafSPdg~~~~~~lLatgs~----- 300 (845)
+.+... .... +..|... ..+... ..-..+..+|+++ ++.+...
T Consensus 416 vid~~~--~~~~-----------------------~~~~kvv-~~i~~~g~g~~~i~~~p~~~-----~l~v~~~~~~~~ 464 (567)
T 1qks_A 416 LIGTDP--EGHP-----------------------DNAWKIL-DSFPALGGGSLFIKTHPNSQ-----YLYVDATLNPEA 464 (567)
T ss_dssp EEECCT--TTCT-----------------------TTBTSEE-EEEECSCSCCCCEECCTTCS-----EEEEECTTCSSH
T ss_pred EecCCC--CCCc-----------------------cccCEEE-EEEecCCCCCEEEEeCCCCC-----eEEEecCCCCCc
Confidence 211110 0000 0000000 000000 1113466788887 5665442
Q ss_pred --CCeEEEEECCCC-----e-EEEEec--------CCCCCEEEEEEeCCCCEEEEEeC-----CC-EEEEEecCCceEEE
Q psy467 301 --DRTVNFWDLEKF-----S-LVSTTE--------KNSSTIRRLTFSEGGECLLGGDT-----EG-LKVYGWEPARQYDA 358 (845)
Q Consensus 301 --DG~I~IWDl~s~-----~-~l~tl~--------gh~~~VtslafSpdG~~Lasgs~-----DG-I~IWDl~tgk~l~t 358 (845)
.+.|.+||+.+. . ....+. .....+..+.|+++|+++.++.. ++ |.|+|..+++.+.+
T Consensus 465 ~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~ 544 (567)
T 1qks_A 465 EISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHV 544 (567)
T ss_dssp HHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEE
T ss_pred ccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEE
Confidence 358999999876 2 222332 12457899999999999887632 46 99999999999888
Q ss_pred ecCC
Q psy467 359 QPMG 362 (845)
Q Consensus 359 l~~h 362 (845)
++..
T Consensus 545 i~~~ 548 (567)
T 1qks_A 545 IKDE 548 (567)
T ss_dssp ECCT
T ss_pred eCCC
Confidence 8753
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.39 E-value=1.5e-11 Score=149.04 Aligned_cols=241 Identities=12% Similarity=0.076 Sum_probs=157.6
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCC-----CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCc-------
Q psy467 14 HGASVNCLALGKKSGQVLATGGDD-----KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGS------- 81 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~D-----G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGt------- 81 (845)
|...+.+++||| +|++||.+..+ ..|++||+.+++.+.... +...+..++|+|| +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 161 GATALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp --EEEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred CCEEEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 334788999999 99999887643 469999999988765321 2222357899999 99988877654
Q ss_pred -------EEEEECCCCcE--EEEEc--CCCCCeEEEEEccCCCEEEEEECCC-----eEEEEECCCC--ceEEEEcCCCC
Q psy467 82 -------IKIWNLAVPTV--QRTLN--GHKSSITSVDFHPYGDYLCSGSLDS-----FIKLWDLRRK--GCIYTYRGHSK 143 (845)
Q Consensus 82 -------V~VWDl~tg~~--v~~l~--~h~~~V~~lafspdg~~Lasgs~DG-----~I~IWDl~t~--~~l~~~~~h~~ 143 (845)
|.+|++.++.. ...+. .+...+..+.|+|||++|+..+.++ .|++||+.++ .+...+..+..
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence 89999987652 22333 3334588999999999998877544 8999999876 31445554554
Q ss_pred CeEEEEEecCCCEEEEEeCCC----cEEEeeeeccCCceeEEEECCCCc-cCCCCCCCCCcceeecCCCCeEEEEecCCC
Q psy467 144 SINSIRFSPDGQWIASGGEDG----VVRIGASFHLTNTSIHVVDLSLVH-PLGTPPPQYTSSVPFSHNTSLRKSFTKGRP 218 (845)
Q Consensus 144 ~V~sLafSPdg~~Lasgs~DG----~I~I~~~~~~~~~~I~vWDl~tg~-~l~~~~~~~i~svs~spdg~~l~~~~~h~~ 218 (845)
.+... ++|+|+.|+..+.++ .|.+ ||+.++. . ...+..+..
T Consensus 318 ~~~~~-~~~dg~~l~~~s~~~~~~~~l~~-------------~d~~~~~~~--------------------~~~l~~~~~ 363 (741)
T 1yr2_A 318 AQWDF-VDGVGDQLWFVSGDGAPLKKIVR-------------VDLSGSTPR--------------------FDTVVPESK 363 (741)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEE-------------EECSSSSCE--------------------EEEEECCCS
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEE-------------EeCCCCccc--------------------cEEEecCCC
Confidence 45544 358899888777643 3555 8876531 1 111111111
Q ss_pred CCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEE
Q psy467 219 GGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS 298 (845)
Q Consensus 219 ~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg 298 (845)
. .+ ..+.++ ++. ++++.
T Consensus 364 ~------~l---------------------------~~~~~~-~~~-----------------------------lv~~~ 380 (741)
T 1yr2_A 364 D------NL---------------------------ESVGIA-GNR-----------------------------LFASY 380 (741)
T ss_dssp S------EE---------------------------EEEEEE-BTE-----------------------------EEEEE
T ss_pred C------eE---------------------------EEEEEE-CCE-----------------------------EEEEE
Confidence 1 01 223333 223 78888
Q ss_pred eCCCeEEEEECC-CCeEEEEecC-CCCCEEEEEEeCCCCEEEEE-eC---CC-EEEEEecCCc
Q psy467 299 SADRTVNFWDLE-KFSLVSTTEK-NSSTIRRLTFSEGGECLLGG-DT---EG-LKVYGWEPAR 354 (845)
Q Consensus 299 s~DG~I~IWDl~-s~~~l~tl~g-h~~~VtslafSpdG~~Lasg-s~---DG-I~IWDl~tgk 354 (845)
..|+..+||.+. ++.....+.. +.+.+..+.++|+++.|+.. +. .+ |++||+.+++
T Consensus 381 ~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 381 IHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 889887776543 4556666664 35678999999998866533 22 23 8889988876
No 203
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.35 E-value=4.9e-10 Score=120.01 Aligned_cols=236 Identities=13% Similarity=0.032 Sum_probs=155.3
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~ 91 (845)
..+..--.+..|+++++.++++...++.|..||..++.. ..+. ....+.+++++++|+++++. ++.|.+||.++++
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQS 84 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTE
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCc
Confidence 344456678999996667777777889999999987765 3333 45689999999999955543 6789999998876
Q ss_pred EEEEEcC----CCCCeEEEEEccCCCEEEEEECC---------CeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEE
Q psy467 92 VQRTLNG----HKSSITSVDFHPYGDYLCSGSLD---------SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIA 158 (845)
Q Consensus 92 ~v~~l~~----h~~~V~~lafspdg~~Lasgs~D---------G~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~La 158 (845)
....... ....+.+++++|+|+++++...+ ..-.+|.+.....+..+.........++|+||++.|+
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~ly 164 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFY 164 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEE
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEE
Confidence 5433321 12347889999999966654321 2334555543222222333334568899999998775
Q ss_pred EE-eCCCcEEEeeeeccCCceeEEEECC--CCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeeccccc
Q psy467 159 SG-GEDGVVRIGASFHLTNTSIHVVDLS--LVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAE 235 (845)
Q Consensus 159 sg-s~DG~I~I~~~~~~~~~~I~vWDl~--tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~ 235 (845)
.+ +.++.|.. ||+. ++... +.+.+..+..+
T Consensus 165 v~~~~~~~i~~-------------~~~d~~~G~~~---------------~~~~~~~~~~~------------------- 197 (297)
T 3g4e_A 165 YIDSLSYSVDA-------------FDYDLQTGQIS---------------NRRSVYKLEKE------------------- 197 (297)
T ss_dssp EEEGGGTEEEE-------------EEECTTTCCEE---------------EEEEEEECCGG-------------------
T ss_pred EecCCCCcEEE-------------EeccCCCCccc---------------CcEEEEECCCC-------------------
Confidence 54 45677888 8763 33320 00000000000
Q ss_pred ccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE
Q psy467 236 SEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV 315 (845)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l 315 (845)
......+++.++|+ +.++....+.|..||..+++.+
T Consensus 198 ---------------------------------------~~~p~g~~~d~~G~-----lwva~~~~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 198 ---------------------------------------EQIPDGMCIDAEGK-----LWVACYNGGRVIRLDPVTGKRL 233 (297)
T ss_dssp ---------------------------------------GCEEEEEEEBTTSC-----EEEEEETTTEEEEECTTTCCEE
T ss_pred ---------------------------------------CCCCCeeEECCCCC-----EEEEEcCCCEEEEEcCCCceEE
Confidence 01123445555554 7777777889999999999999
Q ss_pred EEecCCCCCEEEEEEe-CCCCEEEEEeC
Q psy467 316 STTEKNSSTIRRLTFS-EGGECLLGGDT 342 (845)
Q Consensus 316 ~tl~gh~~~VtslafS-pdG~~Lasgs~ 342 (845)
..+..+...+++++|. |+++.|++++.
T Consensus 234 ~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 234 QTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 9988777789999999 89887776654
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.35 E-value=5.7e-10 Score=118.74 Aligned_cols=227 Identities=11% Similarity=0.076 Sum_probs=149.2
Q ss_pred cCCCCCeEEEEEcCCCCEEEE-------EECCCcEEEEECCCCcEEEEEc----CCCCCeEEEEEccC-CCEEEEEECCC
Q psy467 55 SGHSTPVESVQFGNGEETLSA-------GCQSGSIKIWNLAVPTVQRTLN----GHKSSITSVDFHPY-GDYLCSGSLDS 122 (845)
Q Consensus 55 ~~h~~~V~sLafSpdg~~LaS-------gs~DGtV~VWDl~tg~~v~~l~----~h~~~V~~lafspd-g~~Lasgs~DG 122 (845)
...-....+++|++++..+++ +..++.|.+||..+++...... ++...+.+++++++ ++ +++++..+
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~~ 92 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMRL 92 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEETTT
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEECCC
Confidence 334456789999999988877 5678999999998887543322 24467899999999 65 44445455
Q ss_pred eEEEEECCCCceEEE-EcC----CCCCeEEEEEecCCCEEEEEeCC---------------CcEEEeeeeccCCceeEEE
Q psy467 123 FIKLWDLRRKGCIYT-YRG----HSKSINSIRFSPDGQWIASGGED---------------GVVRIGASFHLTNTSIHVV 182 (845)
Q Consensus 123 ~I~IWDl~t~~~l~~-~~~----h~~~V~sLafSPdg~~Lasgs~D---------------G~I~I~~~~~~~~~~I~vW 182 (845)
.|.+||.. ++.... ... ....+.+++++++|+++++...+ +.|.. |
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~-------------~ 158 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYC-------------F 158 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEE-------------E
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEE-------------E
Confidence 79999988 665433 221 12357899999999877766544 22332 4
Q ss_pred ECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCC
Q psy467 183 DLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPH 262 (845)
Q Consensus 183 Dl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspd 262 (845)
|.. ++. ......
T Consensus 159 ~~~-g~~--------------------~~~~~~----------------------------------------------- 170 (314)
T 1pjx_A 159 TTD-GQM--------------------IQVDTA----------------------------------------------- 170 (314)
T ss_dssp CTT-SCE--------------------EEEEEE-----------------------------------------------
T ss_pred CCC-CCE--------------------EEeccC-----------------------------------------------
Confidence 332 211 110000
Q ss_pred CCcCCCCcccccccCceeEEEc----CCCCcccceEEEEEeCCCeEEEEECC-CCe-----EEEEecCCC-CCEEEEEEe
Q psy467 263 RSLNRSGTCVPVSVSRTSLSIL----PQSPMLCFILTTSSSADRTVNFWDLE-KFS-----LVSTTEKNS-STIRRLTFS 331 (845)
Q Consensus 263 g~~~~~~~~~~~~~~I~slafS----Pdg~~~~~~lLatgs~DG~I~IWDl~-s~~-----~l~tl~gh~-~~VtslafS 331 (845)
......++|+ |+++. ++++...++.|.+||.. +++ ....+..+. ..+..++++
T Consensus 171 ------------~~~~~~i~~~~~~d~dg~~----l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d 234 (314)
T 1pjx_A 171 ------------FQFPNGIAVRHMNDGRPYQ----LIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFD 234 (314)
T ss_dssp ------------ESSEEEEEEEECTTSCEEE----EEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEB
T ss_pred ------------CCCcceEEEecccCCCCCE----EEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEEC
Confidence 0112344455 55531 44555567899999976 454 233344443 568899999
Q ss_pred CCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 332 EGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 332 pdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
++|++.++...++ |.+||.++++.+..+..+...+.+++|+ +++.|.++
T Consensus 235 ~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~ 285 (314)
T 1pjx_A 235 EDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVT 285 (314)
T ss_dssp TTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEE
Confidence 9999888877777 9999998788777777777889999999 88845444
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.34 E-value=3.9e-09 Score=117.64 Aligned_cols=264 Identities=6% Similarity=-0.027 Sum_probs=173.9
Q ss_pred EecCCCCEEEEEeC--CC---eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE----------CCCcEEEEEC
Q psy467 23 LGKKSGQVLATGGD--DK---KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC----------QSGSIKIWNL 87 (845)
Q Consensus 23 fSp~dg~~LaTgs~--DG---~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs----------~DGtV~VWDl 87 (845)
..| +++++++... .. .|.+||..+++.+.++.....+ .++++|||++|+++. .++.|.+||.
T Consensus 28 ~~~-~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 28 PGA-DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred CCC-CCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 345 7777777653 22 8899999999998888754444 999999999999886 3678999999
Q ss_pred CCCcEEEEEcCC-------CCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEE-EcCCCCCeEEEEEecCC-CE
Q psy467 88 AVPTVQRTLNGH-------KSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYT-YRGHSKSINSIRFSPDG-QW 156 (845)
Q Consensus 88 ~tg~~v~~l~~h-------~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~-~~~h~~~V~sLafSPdg-~~ 156 (845)
.+.+.+..+... ...-..++|+|||++|+++.. ++.|.++| .+++.+.. +.. .. |+.+.|++ +.
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~ 179 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPST 179 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCce
Confidence 999888877532 123457899999999998874 47899999 99988877 542 22 24555655 45
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
+++.+.||.+.+ +|. +++. ...... .. +. .
T Consensus 180 ~~~~~~dg~~~~-------------vd~-~g~~--------------------~~~~~~--~~-------~~-~------ 209 (373)
T 2mad_H 180 FYLLCAQGGLAK-------------TDH-AGGA--------------------AGAGLV--GA-------ML-T------ 209 (373)
T ss_pred EEEEcCCCCEEE-------------EEC-CCcE--------------------EEEEec--cc-------cc-c------
Confidence 667778899888 888 6665 211000 00 00 0
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCe--E
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS--L 314 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~--~ 314 (845)
+ ..+......+.+++. . ++++ +..+.+.+.|+.... .
T Consensus 210 ----~--------~~p~~~~~~~~~~~~-----------------------~-----~~~~-~~~~~v~vid~~~~~~~v 248 (373)
T 2mad_H 210 ----A--------AQNLLTQPAQANKSG-----------------------R-----IVWP-VYSGKILQADISAAGATN 248 (373)
T ss_pred ----C--------CcceeecceeEecCC-----------------------E-----EEEE-cCCceEEEEeccCCcceE
Confidence 0 000001122223222 1 3333 367789999986542 2
Q ss_pred EEEecC----------CCCCEEEEEEeCCCCEEEEEeC----------CC-EEEEEecCCceEEEecCCCCCeEEEEEc-
Q psy467 315 VSTTEK----------NSSTIRRLTFSEGGECLLGGDT----------EG-LKVYGWEPARQYDAQPMGWGKVQDLAVT- 372 (845)
Q Consensus 315 l~tl~g----------h~~~VtslafSpdG~~Lasgs~----------DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS- 372 (845)
+..+.- .......+++++|++.|+++.. .+ |.++|..+++.+.++... ....+++|+
T Consensus 249 ~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~~i~~s~ 327 (373)
T 2mad_H 249 KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-HDVDAISVAQ 327 (373)
T ss_pred eeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-CCcCeEEECC
Confidence 233221 1123445789999998887653 24 999999999998888643 368999999
Q ss_pred CCc-eEEEE------EEEEee
Q psy467 373 GTQ-LWFRR------VGTWSH 386 (845)
Q Consensus 373 dg~-lLaaS------VsiW~~ 386 (845)
||+ +++++ |++|..
T Consensus 328 Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 328 DGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred CCCeEEEEEcCCCCeEEEEEC
Confidence 888 66665 555543
No 206
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.32 E-value=1.1e-09 Score=123.63 Aligned_cols=248 Identities=10% Similarity=0.060 Sum_probs=162.6
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCC--cEEEEECCCCcEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG--SIKIWNLAVPTVQ 93 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG--tV~VWDl~tg~~v 93 (845)
.....|+|++ +++++++...++.|++||..++........... .. ++|+++++.|+++..++ .|.+|+...+...
T Consensus 131 ~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 4688999998 888888877789999999988777665554333 33 99999999999888766 7999998776554
Q ss_pred EEE----cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE----EcCCCCCe-E-EEEEecC-CCEEEEEeC
Q psy467 94 RTL----NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT----YRGHSKSI-N-SIRFSPD-GQWIASGGE 162 (845)
Q Consensus 94 ~~l----~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~----~~~h~~~V-~-sLafSPd-g~~Lasgs~ 162 (845)
..+ ......+.+++++|++..|+++..++.|+.||..++..... ..+....- . .++|+|+ +.++++-..
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 444 22445678999999655666677889999999987654322 22222222 3 8999995 555555556
Q ss_pred CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 163 DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 163 DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
++.|+. |+.... . ..+.++... .. .
T Consensus 288 ~~~I~~-------------~~~~g~-~---------------------~~~~g~~~~--~g---~--------------- 312 (409)
T 3hrp_A 288 LSSVYK-------------ITPDGE-C---------------------EWFCGSATQ--KT---V--------------- 312 (409)
T ss_dssp TTEEEE-------------ECTTCC-E---------------------EEEEECTTC--CS---C---------------
T ss_pred CCEEEE-------------EecCCC-E---------------------EEEEeCCCC--CC---c---------------
Confidence 677777 775422 1 122222100 00 0
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe-CCCeEEEEECCCCeEEEEecCC
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS-ADRTVNFWDLEKFSLVSTTEKN 321 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs-~DG~I~IWDl~s~~~l~tl~gh 321 (845)
.++. ...........++++++|+ ++++-. .++.|+.||+.++.. .++.++
T Consensus 313 ------------------~dg~-----~~~~~~~~P~gia~d~dG~-----lyvad~~~~~~I~~~~~~~G~v-~~~~g~ 363 (409)
T 3hrp_A 313 ------------------QDGL-----REEALFAQPNGMTVDEDGN-----FYIVDGFKGYCLRKLDILDGYV-STVAGQ 363 (409)
T ss_dssp ------------------BCEE-----GGGCBCSSEEEEEECTTCC-----EEEEETTTTCEEEEEETTTTEE-EEEEEC
T ss_pred ------------------CCCc-----ccccEeCCCeEEEEeCCCC-----EEEEeCCCCCEEEEEECCCCEE-EEEeCC
Confidence 0000 0000012235666677766 788887 889999999887764 444443
Q ss_pred ---------------CCCEEEEEEeCCCCEEEEEeCCC-EEEEEe
Q psy467 322 ---------------SSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350 (845)
Q Consensus 322 ---------------~~~VtslafSpdG~~Lasgs~DG-I~IWDl 350 (845)
-.....++++++|.++++-..++ |+.+++
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 23588999999987777666666 877765
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.29 E-value=1.1e-09 Score=124.05 Aligned_cols=283 Identities=11% Similarity=-0.009 Sum_probs=177.2
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE----------CCCcEEEEECCCCc
Q psy467 27 SGQVLATGGDD-----KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC----------QSGSIKIWNLAVPT 91 (845)
Q Consensus 27 dg~~LaTgs~D-----G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs----------~DGtV~VWDl~tg~ 91 (845)
++..+++.... +.|.++|..+++.+.++..-..+ .++++||+++|+++. .++.|.++|..+++
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 66766666542 69999999999999998765556 899999999888876 36789999999999
Q ss_pred EEEEEcCC-------CCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCC-CEEEEEe
Q psy467 92 VQRTLNGH-------KSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIASGG 161 (845)
Q Consensus 92 ~v~~l~~h-------~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg-~~Lasgs 161 (845)
.+..+... ......+.|+|||++++++.. ++.|.+.|+.+++.+.++.... . ....|++ ..+++.+
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~ 236 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNC 236 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEE
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEc
Confidence 98887522 123467899999999998874 5789999999999988876321 1 2333433 4555666
Q ss_pred CCCcEEEeeeeccCCceeEEEECCCCccC----CCCC---CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 162 EDGVVRIGASFHLTNTSIHVVDLSLVHPL----GTPP---PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 162 ~DG~I~I~~~~~~~~~~I~vWDl~tg~~l----~~~~---~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
.||.+.+ .+..+++.. ..+. ......+.+.+++..+..... .. .+.+.+.....
T Consensus 237 ~dG~~~~-------------V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g-----~V~ViD~~~~~ 297 (426)
T 3c75_H 237 RDGSLAR-------------VDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TG-----KIFQADLTAEG 297 (426)
T ss_dssp TTSSEEE-------------EECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TS-----EEEEEEECSSC
T ss_pred CCCCEEE-------------EECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CC-----cEEEEeccCCc
Confidence 6777666 444333221 0000 111123445666655443321 11 11121110000
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEe---------CCCeEE
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS---------ADRTVN 305 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs---------~DG~I~ 305 (845)
... . . .|..... .....-........++++|+++. ++++.. .++.|.
T Consensus 298 ~~v--------~--------~--~~~~~~~--~~i~~g~~p~g~~~va~s~dg~r----lyVa~~~~~~gthk~~s~~Vs 353 (426)
T 3c75_H 298 ATF--------R--------A--PIEALTE--AERADDWRPGGWQQTAYHRQSDR----IYLLVDQRDEWKHKAASRFVV 353 (426)
T ss_dssp EEE--------C--------C--CEESSCT--TTGGGTEEECSSSCEEEEGGGTE----EEEEEEECCTTCTTSCEEEEE
T ss_pred eEE--------e--------e--eeeeccc--cccccccccCCceeeEEcCCCCE----EEEEecccccccccCCCCEEE
Confidence 000 0 0 0000000 00000000112234678888772 333322 135799
Q ss_pred EEECCCCeEEEEecCCCCCEEEEEEeCCCC-EEEEEeC-CC-EEEEEecCCceEEEe
Q psy467 306 FWDLEKFSLVSTTEKNSSTIRRLTFSEGGE-CLLGGDT-EG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 306 IWDl~s~~~l~tl~gh~~~VtslafSpdG~-~Lasgs~-DG-I~IWDl~tgk~l~tl 359 (845)
++|+.+++.+.++... .....++|+|||+ .++++.. ++ |.++|..+++.+.++
T Consensus 354 VID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 354 VLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 9999999999988742 3588999999999 8888884 66 999999999999887
No 208
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.25 E-value=6e-09 Score=113.34 Aligned_cols=228 Identities=12% Similarity=-0.023 Sum_probs=149.1
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l 96 (845)
-..+.+|+|+++.++++...++.|..|+..+++.. .+. ....+.+++|+++|+++++. . ..|.+||..+++.....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEe
Confidence 45788999955667777777889999999877643 333 35679999999999877754 3 45999999888754433
Q ss_pred cCC----CCCeEEEEEccCCCEEEEEEC------CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCc
Q psy467 97 NGH----KSSITSVDFHPYGDYLCSGSL------DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGV 165 (845)
Q Consensus 97 ~~h----~~~V~~lafspdg~~Lasgs~------DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~ 165 (845)
... ...+.+++++|+|+++++... .+.|..++ +++.. .+.........++|+||++.++.+. .++.
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCE
Confidence 211 235789999999987665432 24566666 45433 3322334578899999998776554 4677
Q ss_pred EEEeeeeccCCceeEEEECC--CC-ccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccc
Q psy467 166 VRIGASFHLTNTSIHVVDLS--LV-HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~--tg-~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~ 242 (845)
|.+ ||+. ++ .... .+.+..+....
T Consensus 203 I~~-------------~d~~~~~Gl~~~~---------------~~~~~~~~~~~------------------------- 229 (326)
T 2ghs_A 203 LMR-------------VPLDARTGLPTGK---------------AEVFIDSTGIK------------------------- 229 (326)
T ss_dssp EEE-------------EEBCTTTCCBSSC---------------CEEEEECTTSS-------------------------
T ss_pred EEE-------------EEcccccCCcccC---------------ceEEEECCCCC-------------------------
Confidence 888 8875 44 2200 00000000000
Q ss_pred hhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC
Q psy467 243 EELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS 322 (845)
Q Consensus 243 ~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~ 322 (845)
.....+++.++|. +.++...++.|.+||. +++.+..+..+.
T Consensus 230 ---------------------------------~~p~gi~~d~~G~-----lwva~~~~~~v~~~d~-~g~~~~~i~~~~ 270 (326)
T 2ghs_A 230 ---------------------------------GGMDGSVCDAEGH-----IWNARWGEGAVDRYDT-DGNHIARYEVPG 270 (326)
T ss_dssp ---------------------------------SEEEEEEECTTSC-----EEEEEETTTEEEEECT-TCCEEEEEECSC
T ss_pred ---------------------------------CCCCeeEECCCCC-----EEEEEeCCCEEEEECC-CCCEEEEEECCC
Confidence 0112344445554 6776666789999998 577777777666
Q ss_pred CCEEEEEEe-CCCCEEEEEeCC
Q psy467 323 STIRRLTFS-EGGECLLGGDTE 343 (845)
Q Consensus 323 ~~VtslafS-pdG~~Lasgs~D 343 (845)
..+++++|+ ++++.|++++..
T Consensus 271 ~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 271 KQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp SBEEEEEEESTTSCEEEEEEBC
T ss_pred CCcEEEEEecCCCCEEEEEecC
Confidence 789999999 898877665543
No 209
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.25 E-value=2.3e-09 Score=115.05 Aligned_cols=240 Identities=12% Similarity=0.018 Sum_probs=158.2
Q ss_pred eeEEeccCCCcEEEEEEecCCCC-EEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 7 KAEDFMAHGASVNCLALGKKSGQ-VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg~-~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
.++.+..+.....+.+|++ +|+ +++++..++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|
T Consensus 36 ~~~~l~~~~~~~egp~~~~-~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWE-AQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRS 112 (305)
T ss_dssp CCEEEECCCSSEEEEEEEG-GGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred ceEEEecCCcCccCCeEeC-CCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEE
Confidence 3456666777888999999 777 6677777899999998 444 44555567789999999999977665556889999
Q ss_pred ECCCCcEEEEEcCC----CCCeEEEEEccCCCEEEE----EEC-------------CCeEEEEECCCCceEEEEcCCCCC
Q psy467 86 NLAVPTVQRTLNGH----KSSITSVDFHPYGDYLCS----GSL-------------DSFIKLWDLRRKGCIYTYRGHSKS 144 (845)
Q Consensus 86 Dl~tg~~v~~l~~h----~~~V~~lafspdg~~Las----gs~-------------DG~I~IWDl~t~~~l~~~~~h~~~ 144 (845)
+.+ ++........ ...+.+++++++|+++++ |.. .+.|..||..+++..... ....
T Consensus 113 ~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~ 189 (305)
T 3dr2_A 113 DAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH 189 (305)
T ss_dssp CTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS
T ss_pred CCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC
Confidence 986 5543322211 134678999999998776 332 256788887666654333 3345
Q ss_pred eEEEEEecCCCEEEEEeCC------CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCC
Q psy467 145 INSIRFSPDGQWIASGGED------GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRP 218 (845)
Q Consensus 145 V~sLafSPdg~~Lasgs~D------G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~ 218 (845)
...++|+||++.|+.+... +.|.. |++..+.. .. ...+...
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~-------------~~~~~~~l-~~-----------------~~~~~~~-- 236 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITA-------------FAWRDGAL-HD-----------------RRHFASV-- 236 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEE-------------EEEETTEE-EE-----------------EEEEECC--
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEE-------------EEecCCCc-cC-----------------CeEEEEC--
Confidence 7889999999988777664 56666 77653221 00 0000000
Q ss_pred CCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEE
Q psy467 219 GGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSS 298 (845)
Q Consensus 219 ~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatg 298 (845)
+. .....+++.++|+ +.++.
T Consensus 237 ------------------------------------------~~-------------~~pdgi~~d~~G~-----lwv~~ 256 (305)
T 3dr2_A 237 ------------------------------------------PD-------------GLPDGFCVDRGGW-----LWSSS 256 (305)
T ss_dssp ------------------------------------------SS-------------SCCCSEEECTTSC-----EEECC
T ss_pred ------------------------------------------CC-------------CCCCeEEECCCCC-----EEEec
Confidence 00 0122345555555 44443
Q ss_pred eCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Q psy467 299 SADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYG 349 (845)
Q Consensus 299 s~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DGI~IWD 349 (845)
.+ .|.+||. +++.+..+..+. .+.+++|+++++.|+.++.+++..++
T Consensus 257 -~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 257 -GT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp -SS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred -CC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 44 5999998 477777776544 58999999999999988887744333
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.24 E-value=7.1e-09 Score=110.92 Aligned_cols=236 Identities=11% Similarity=0.136 Sum_probs=147.3
Q ss_pred cCCCCCeEEEEEcCCCC-EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc
Q psy467 55 SGHSTPVESVQFGNGEE-TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133 (845)
Q Consensus 55 ~~h~~~V~sLafSpdg~-~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~ 133 (845)
..+..-..+..|++++. .+++...++.|..||..++.. ..+. ....+.+++++++|+++++ . ++.|.+||..+++
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQS 84 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTE
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCc
Confidence 33445567899999655 455555688999999998765 3343 4567999999999995544 4 5679999998776
Q ss_pred eEEEEcC----CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCe
Q psy467 134 CIYTYRG----HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSL 209 (845)
Q Consensus 134 ~l~~~~~----h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~ 209 (845)
....... ....+.+++++|+|+++++......... ......+.+ |.+..... .
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~--~~~~~~~~l--~~~d~~g~-------------------~ 141 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPA--VLERHQGAL--YSLFPDHH-------------------V 141 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTT--BCCTTCEEE--EEECTTSC-------------------E
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccc--cccCCCcEE--EEEECCCC-------------------E
Confidence 5433321 1234788999999986664432211000 000000001 22211111 0
Q ss_pred EEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCc
Q psy467 210 RKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPM 289 (845)
Q Consensus 210 l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~ 289 (845)
...... ....+.++|+||++.
T Consensus 142 ~~~~~~-----------------------------------------------------------~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 142 KKYFDQ-----------------------------------------------------------VDISNGLDWSLDHKI 162 (297)
T ss_dssp EEEEEE-----------------------------------------------------------ESBEEEEEECTTSCE
T ss_pred EEEeec-----------------------------------------------------------cccccceEEcCCCCE
Confidence 100000 011234566666652
Q ss_pred ccceEEEEEeCCCeEEEEEC--CCCeE-----EEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecC
Q psy467 290 LCFILTTSSSADRTVNFWDL--EKFSL-----VSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPM 361 (845)
Q Consensus 290 ~~~~lLatgs~DG~I~IWDl--~s~~~-----l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~ 361 (845)
++++.+.++.|.+||+ .++.. +..+..+.+....++++++|++.++...++ |.+||.++++.+..+..
T Consensus 163 ----lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 163 ----FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL 238 (297)
T ss_dssp ----EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC
T ss_pred ----EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC
Confidence 4456666889999987 45543 223333345688999999998777777677 99999999999999988
Q ss_pred CCCCeEEEEEc--CCceEEEE
Q psy467 362 GWGKVQDLAVT--GTQLWFRR 380 (845)
Q Consensus 362 h~~~VtsVafS--dg~lLaaS 380 (845)
+...+++++|. +++.|.++
T Consensus 239 p~~~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 239 PVDKTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp SSSBEEEEEEESGGGCEEEEE
T ss_pred CCCCceEEEEeCCCCCEEEEE
Confidence 87889999998 55655544
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.23 E-value=1.9e-08 Score=105.50 Aligned_cols=152 Identities=11% Similarity=0.011 Sum_probs=111.6
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEE-EecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy467 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIM-SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~-~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~ 91 (845)
.+...+.++++.+ +|.++++...++.|..||.. ++... .+......+.++++.++++++++...++.|..||.. ++
T Consensus 59 ~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 135 (300)
T 2qc5_A 59 TPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GT 135 (300)
T ss_dssp STTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC
T ss_pred CCCCcceeEEECC-CCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CC
Confidence 3446799999998 88877777667899999987 55432 223345679999999999888777668899999988 65
Q ss_pred EEEE-EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEE-EcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 92 VQRT-LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 92 ~v~~-l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~-~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.... +......+.++++.++++.+++...++.|..||. +++.... .......+.+++++++|+++++....+.|..
T Consensus 136 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 213 (300)
T 2qc5_A 136 IYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGR 213 (300)
T ss_dssp EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred EEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEE
Confidence 5432 3334567899999999996666666788999998 5554432 2233456889999999987766666677888
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.22 E-value=7.6e-09 Score=116.67 Aligned_cols=227 Identities=7% Similarity=-0.019 Sum_probs=151.5
Q ss_pred CCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC--eEEEEECCCCceEE
Q psy467 59 TPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS--FIKLWDLRRKGCIY 136 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG--~I~IWDl~t~~~l~ 136 (845)
.....|+|+++++++++...++.|++||..++......... .... ++|+++++.|++++.++ .|.+|+...+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 46889999999997777777799999999987766555543 3334 99999999999988766 79999987665544
Q ss_pred EE----cCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEE
Q psy467 137 TY----RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKS 212 (845)
Q Consensus 137 ~~----~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~ 212 (845)
.+ ......+.+++++|++..|+++..++.|+. ||..++.. ..
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~-------------~d~~~~~~---------------------~~ 254 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGR-------------FNVKTQEV---------------------TL 254 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEE-------------EETTTCCE---------------------EE
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEE-------------EECCCCCE---------------------EE
Confidence 44 224466789999996555666777788888 98875543 11
Q ss_pred EecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC-CCccc
Q psy467 213 FTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ-SPMLC 291 (845)
Q Consensus 213 ~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd-g~~~~ 291 (845)
+...... . ..+. .+...++|+|+ +.
T Consensus 255 ~~~~~~~-----------------------------------g-----~~~~-----------~P~~~ia~~p~~g~--- 280 (409)
T 3hrp_A 255 IKQLELS-----------------------------------G-----SLGT-----------NPGPYLIYYFVDSN--- 280 (409)
T ss_dssp EEECCCC-----------------------------------S-----CCCC-----------SSCCEEEEETTTTE---
T ss_pred Eeccccc-----------------------------------C-----CCCC-----------CccccEEEeCCCCE---
Confidence 1110000 0 0000 00114555553 33
Q ss_pred ceEEEEEeCCCeEEEEECCCCeEEEEecCCC---------------CCEEEEEEeCCCCEEEEEe-CCC-EEEEEecCCc
Q psy467 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNS---------------STIRRLTFSEGGECLLGGD-TEG-LKVYGWEPAR 354 (845)
Q Consensus 292 ~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~---------------~~VtslafSpdG~~Lasgs-~DG-I~IWDl~tgk 354 (845)
++++...++.|+.|+.... +..+.++. .....++++++|+++++-. .++ |+.|++.++.
T Consensus 281 --lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 281 --FYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp --EEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred --EEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 6777777889999997754 33333332 3578999999999666665 566 9999987776
Q ss_pred eEEEecCC---------------CCCeEEEEEc-CCceEEEE
Q psy467 355 QYDAQPMG---------------WGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 355 ~l~tl~~h---------------~~~VtsVafS-dg~lLaaS 380 (845)
. .++.++ -....+++++ +|.++++-
T Consensus 357 v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad 397 (409)
T 3hrp_A 357 V-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAE 397 (409)
T ss_dssp E-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEE
T ss_pred E-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEE
Confidence 4 444333 2468999999 76665554
No 213
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.19 E-value=9.5e-10 Score=132.34 Aligned_cols=146 Identities=11% Similarity=0.134 Sum_probs=99.9
Q ss_pred cCCCcEEEEEEecCCCCEEEEEe-----CCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCC-------
Q psy467 13 AHGASVNCLALGKKSGQVLATGG-----DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG------- 80 (845)
Q Consensus 13 gH~~~V~~LafSp~dg~~LaTgs-----~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG------- 80 (845)
+|...+..++||| +|++||.+. ....|++||+.+++.+.... +......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCccccccc
Confidence 4566789999999 999888543 23579999999998654311 11113567899 999999988774
Q ss_pred ------cEEEEECCCCcE--EEEE--cC-CCCCeEEEEEccCCCEEEEEEC----CCeEEEEECCCCc-eEEEEcCCCCC
Q psy467 81 ------SIKIWNLAVPTV--QRTL--NG-HKSSITSVDFHPYGDYLCSGSL----DSFIKLWDLRRKG-CIYTYRGHSKS 144 (845)
Q Consensus 81 ------tV~VWDl~tg~~--v~~l--~~-h~~~V~~lafspdg~~Lasgs~----DG~I~IWDl~t~~-~l~~~~~h~~~ 144 (845)
.|++|++.++.. ...+ .. |...+..+.|+|||++|+.... ++.|++||+.++. ....+..+...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 399999987642 2333 33 4455788999999998865442 2589999997763 34555555555
Q ss_pred eEEEEEecCCCEEEEEeC
Q psy467 145 INSIRFSPDGQWIASGGE 162 (845)
Q Consensus 145 V~sLafSPdg~~Lasgs~ 162 (845)
.... |+++|..|+..+.
T Consensus 283 ~~~~-~~~~g~~l~~~t~ 299 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTN 299 (693)
T ss_dssp CEEE-EEEETTEEEEEEC
T ss_pred eEEE-EeccCCEEEEEEC
Confidence 5554 6677776655543
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.19 E-value=3e-09 Score=116.53 Aligned_cols=270 Identities=11% Similarity=0.071 Sum_probs=167.7
Q ss_pred CcEEEEEEecCCCCEEEEEe--CCCeEEEEECCCCeeEEEe-------cCCCCCeEEEEEcCCCCEEEEEEC-----CCc
Q psy467 16 ASVNCLALGKKSGQVLATGG--DDKKVNLWALGKSNCIMSL-------SGHSTPVESVQFGNGEETLSAGCQ-----SGS 81 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs--~DG~I~IWdl~t~~~i~~l-------~~h~~~V~sLafSpdg~~LaSgs~-----DGt 81 (845)
..+..+++++ +|+++++.. .++.++||.+.+++. ..+ ..|...+.+++++++++++++-.. ++.
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 7899999999 899888864 234355665545543 322 234568999999999876665433 578
Q ss_pred EEEEECCCCcEEEEEcCC------CCCeEEEEEccCCCEEEEE-E---CCCeEEEEECCCCceEEEEcCCCCCeE-EEEE
Q psy467 82 IKIWNLAVPTVQRTLNGH------KSSITSVDFHPYGDYLCSG-S---LDSFIKLWDLRRKGCIYTYRGHSKSIN-SIRF 150 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h------~~~V~~lafspdg~~Lasg-s---~DG~I~IWDl~t~~~l~~~~~h~~~V~-sLaf 150 (845)
|.+||+.+++.+..+... ...+..+++++++..++.+ . .++.|.+||+.+++..+.+..|..... ...+
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 999999999877766432 2346899999865555444 3 578999999998887766654322110 1345
Q ss_pred ecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeee
Q psy467 151 SPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRI 230 (845)
Q Consensus 151 SPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i 230 (845)
.++|..+.+.+.++.+.. |.. ....++++++++.+......... ++.+
T Consensus 175 ~~~g~~~~~~~~~g~~~~-------------~~~------------~~~gia~s~dg~~ly~~~~~~~~-------l~~~ 222 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIR-------------PHL------------GVNGIVLDAENEWLYLSPMHSTS-------MYRI 222 (343)
T ss_dssp EETTEECBEECTTSCEEC-------------CCC------------CEEEEEECTTSCEEEEEESSCSE-------EEEE
T ss_pred eECCEEEEeccCCCceec-------------eec------------ccceeEeccCCCEEEEEeCCCCe-------EEEE
Confidence 556777777777777766 532 23468888888766654432222 4333
Q ss_pred cccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECC
Q psy467 231 EENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLE 310 (845)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~ 310 (845)
.............++.... .. . ........++++++|. ++++...++.|.+||..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~------~~-~-------------g~~g~pdgia~d~~G~-----l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKI------ER-Y-------------SEKPICDGISIDKDHN-----IYVGDLAHSAIGVITSA 277 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTC------EE-E-------------EECCSCSCEEECTTCC-----EEEEEGGGTEEEEEETT
T ss_pred EHHHhcCCCCChhhhhcce------Ee-c-------------ccCCCCceEEECCCCC-----EEEEccCCCeEEEEECC
Confidence 2211000000011111000 00 0 0011234567777776 88888889999999985
Q ss_pred CCeEEEEecC-CCCCEEEEEEeCCCCEEEEEeCCC
Q psy467 311 KFSLVSTTEK-NSSTIRRLTFSEGGECLLGGDTEG 344 (845)
Q Consensus 311 s~~~l~tl~g-h~~~VtslafSpdG~~Lasgs~DG 344 (845)
+++....... +...+.+++|+++|+++++.+..+
T Consensus 278 ~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 278 DRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp TTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGG
T ss_pred CCCEEEEEECCceecCCeeEECCCCcEEEEeCccc
Confidence 6664333322 245689999999998888776544
No 215
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.12 E-value=3.8e-10 Score=126.35 Aligned_cols=174 Identities=13% Similarity=0.016 Sum_probs=136.1
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe-----------eEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSN-----------CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~-----------~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VW 85 (845)
.++.+++++ ...++++|+.+ .+.+|++.+.. ..... .+.. |+.++| |+++|+++ .++.|++|
T Consensus 39 ~~nlLais~-~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcC-CCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 699999999 88899999987 56679864322 11222 3566 999999 89999999 88999999
Q ss_pred ECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
|+.+.........|...+.++.+.+.. +++++.||.|.+||+.++.... +...|.|++|||+| ++.|..||.
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSC
T ss_pred EchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCc
Confidence 998877666676778889888877653 8889999999999999877653 34579999999999 678999999
Q ss_pred EEEeeeeccCCceeEEEECCCCcc--CCCC-----------CCCCCcceeecCCCCeEEEEecCCC
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHP--LGTP-----------PPQYTSSVPFSHNTSLRKSFTKGRP 218 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~--l~~~-----------~~~~i~svs~spdg~~l~~~~~h~~ 218 (845)
+++ |+...+.. ...+ ....+.++.|.+++.++..+.....
T Consensus 184 i~~-------------~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~~~~ 236 (388)
T 1xip_A 184 FQS-------------FAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVIS 236 (388)
T ss_dssp EEE-------------EEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEECCCC
T ss_pred EEE-------------EcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcCCCC
Confidence 999 87766552 1111 2456788999999998888776553
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.12 E-value=4.1e-08 Score=106.71 Aligned_cols=218 Identities=10% Similarity=-0.039 Sum_probs=140.4
Q ss_pred CeEEEEEcCCCC-EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEE
Q psy467 60 PVESVQFGNGEE-TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY 138 (845)
Q Consensus 60 ~V~sLafSpdg~-~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~ 138 (845)
-..+.+|+|++. .+++...++.|..||..+++.. .+. ....+.+++|+++|+++++. .+ .|.+||..+++.....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEe
Confidence 457889999755 4555556889999999877543 333 34579999999999876654 44 4999999887754332
Q ss_pred cCC----CCCeEEEEEecCCCEEEEEeCC------CcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCC
Q psy467 139 RGH----SKSINSIRFSPDGQWIASGGED------GVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTS 208 (845)
Q Consensus 139 ~~h----~~~V~sLafSPdg~~Lasgs~D------G~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~ 208 (845)
... ...+.+++++|+|+++++...+ +.|.. ++ +++.
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~-------------~~--~g~~------------------- 171 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYH-------------VA--KGKV------------------- 171 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEE-------------EE--TTEE-------------------
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEE-------------Ee--CCcE-------------------
Confidence 211 2357899999999876654321 22322 44 2222
Q ss_pred eEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCC
Q psy467 209 LRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSP 288 (845)
Q Consensus 209 ~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~ 288 (845)
..+..+ . .....++|+||++
T Consensus 172 --~~~~~~----------~------------------------------------------------~~~~~i~~s~dg~ 191 (326)
T 2ghs_A 172 --TKLFAD----------I------------------------------------------------SIPNSICFSPDGT 191 (326)
T ss_dssp --EEEEEE----------E------------------------------------------------SSEEEEEECTTSC
T ss_pred --EEeeCC----------C------------------------------------------------cccCCeEEcCCCC
Confidence 111000 0 0112445555554
Q ss_pred cccceEEEEEeCCCeEEEEECC--CC-e-----EEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEe
Q psy467 289 MLCFILTTSSSADRTVNFWDLE--KF-S-----LVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQ 359 (845)
Q Consensus 289 ~~~~~lLatgs~DG~I~IWDl~--s~-~-----~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl 359 (845)
. ++++.+.++.|.+||+. ++ . .+..+.........++++++|.+.++...++ |.+|+. +++.+..+
T Consensus 192 ~----lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i 266 (326)
T 2ghs_A 192 T----GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARY 266 (326)
T ss_dssp E----EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEE
T ss_pred E----EEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEE
Confidence 1 33455567899999985 55 2 2333443445678999999998777766666 999998 67777888
Q ss_pred cCCCCCeEEEEEc--CCceEEEE
Q psy467 360 PMGWGKVQDLAVT--GTQLWFRR 380 (845)
Q Consensus 360 ~~h~~~VtsVafS--dg~lLaaS 380 (845)
..+...+++++|+ +++.|.++
T Consensus 267 ~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 267 EVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp ECSCSBEEEEEEESTTSCEEEEE
T ss_pred ECCCCCcEEEEEecCCCCEEEEE
Confidence 7777789999998 55655444
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.10 E-value=2.2e-08 Score=111.79 Aligned_cols=270 Identities=13% Similarity=0.024 Sum_probs=167.4
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEe----------CCCeEEEEECCCCeeEEEecCC-------CCCeEEEEEcCCCC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGG----------DDKKVNLWALGKSNCIMSLSGH-------STPVESVQFGNGEE 71 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs----------~DG~I~IWdl~t~~~i~~l~~h-------~~~V~sLafSpdg~ 71 (845)
.++..-..+ .++++| +|+++++++ .++.|.+||..+.+.+.++.-. ......++|+|||+
T Consensus 73 ~~I~vG~~P--~va~sp-DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk 149 (386)
T 3sjl_D 73 GMIDGGFLP--NPVVAD-DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK 149 (386)
T ss_dssp EEEEECSSC--EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS
T ss_pred EEEECCCCC--cEEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCC
Confidence 344433344 499999 888777765 3578999999999988887522 12456799999999
Q ss_pred EEEEEEC--CCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC-CceEEEEcCC----CCC
Q psy467 72 TLSAGCQ--SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-KGCIYTYRGH----SKS 144 (845)
Q Consensus 72 ~LaSgs~--DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t-~~~l~~~~~h----~~~ 144 (845)
+|+++.. ++.|.++|+.+++.+.++.... + ...+....+.+++.+.||.+.+.++.+ ++.......+ ...
T Consensus 150 ~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~ 226 (386)
T 3sjl_D 150 TLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEF 226 (386)
T ss_dssp EEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSC
T ss_pred EEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccc
Confidence 9988864 6899999999999999986322 1 223333456778888999999999976 5543322111 112
Q ss_pred e-EEEEEe-cCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc--CCCC------------CCCCCcceeecCCCC
Q psy467 145 I-NSIRFS-PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP--LGTP------------PPQYTSSVPFSHNTS 208 (845)
Q Consensus 145 V-~sLafS-Pdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~--l~~~------------~~~~i~svs~spdg~ 208 (845)
+ ....|. ++|++++ .+.+|.+++ .|+.+... .... .+.....++++++++
T Consensus 227 ~~~~~~~~~~dG~~~~-vs~~g~V~v-------------~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~ 292 (386)
T 3sjl_D 227 LINHPAYSQKAGRLVW-PTYTGKIHQ-------------IDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALD 292 (386)
T ss_dssp BCSCCEEETTTTEEEE-EBTTSEEEE-------------EECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTT
T ss_pred ccccceeEcCCCcEEE-EeCCCEEEE-------------EECCCCcceeecceeccccccccccccCCCcceeeECCCCC
Confidence 2 124664 5675544 556788888 88765532 1111 123444577777777
Q ss_pred eEEEEecCCCCCc--cceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCC
Q psy467 209 LRKSFTKGRPGGT--KAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQ 286 (845)
Q Consensus 209 ~l~~~~~h~~~~~--~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPd 286 (845)
.+.........+. ...-.| ..++.... +....+.....+..+++++|
T Consensus 293 ~lyV~~~~~~~~~hk~~~~~V-----------------------------~viD~~t~--kv~~~i~vg~~~~~lavs~D 341 (386)
T 3sjl_D 293 RIYLLVDQRDEWRHKTASRFV-----------------------------VVLDAKTG--ERLAKFEMGHEIDSINVSQD 341 (386)
T ss_dssp EEEEEEEECCTTCTTSCEEEE-----------------------------EEEETTTC--CEEEEEEEEEEECEEEECSS
T ss_pred eEEEEeccccccccCCCCCEE-----------------------------EEEECCCC--eEEEEEECCCCcceEEECCC
Confidence 6666432110000 000111 12222111 11112223345678999999
Q ss_pred CCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCC
Q psy467 287 SPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEG 333 (845)
Q Consensus 287 g~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpd 333 (845)
++.. ++++...++.|.++|..+++.+.++..- +.-+.|.+++|
T Consensus 342 ~~~~---ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 342 EKPL---LYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp SSCE---EEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred CCeE---EEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 8631 3444556899999999999999998853 34566777776
No 218
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.08 E-value=8e-09 Score=114.99 Aligned_cols=281 Identities=7% Similarity=-0.043 Sum_probs=167.7
Q ss_pred EEEEEeCCC----eEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE----------CCCcEEEEECCCCcEEEE
Q psy467 30 VLATGGDDK----KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC----------QSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 30 ~LaTgs~DG----~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs----------~DGtV~VWDl~tg~~v~~ 95 (845)
.+++...++ +|.++|..+++.+.++.....+ .+.++||+++++++. .++.|.+||+.+++.+.+
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~ 111 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD 111 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence 344444444 8889999999999998765666 799999999998886 368899999999999999
Q ss_pred EcCC-------CCCeEEEEEccCCCEEEEEEC--CCeEEE--EECCCCceEEEEcCCCCCeEEEEEecCC-CEEEEEeCC
Q psy467 96 LNGH-------KSSITSVDFHPYGDYLCSGSL--DSFIKL--WDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIASGGED 163 (845)
Q Consensus 96 l~~h-------~~~V~~lafspdg~~Lasgs~--DG~I~I--WDl~t~~~l~~~~~h~~~V~sLafSPdg-~~Lasgs~D 163 (845)
+... ......++++|||++++++.. +..|.+ +|+.+ +..+... +. +.+.|++ ..+++.+.|
T Consensus 112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~d 184 (368)
T 1mda_H 112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCP 184 (368)
T ss_dssp EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCT
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCC
Confidence 8633 123568999999999998875 457888 88876 4444321 11 2234444 344556677
Q ss_pred CcEEEeeeeccCCceeEEEECCC-----CccCCC----CCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 164 GVVRIGASFHLTNTSIHVVDLSL-----VHPLGT----PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 164 G~I~I~~~~~~~~~~I~vWDl~t-----g~~l~~----~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
|.+.+ .|+.+ ++.... ........ . .+++..+..... .. +..++...
T Consensus 185 g~~~~-------------vd~~~~~~~~~~v~~~~t~~i~vg~~P~-~-~~~~~~~~~vs~--~~-------V~viD~~~ 240 (368)
T 1mda_H 185 ASLAA-------------SDLAAAPAAAGIVGAQCTGAQNCSSQAA-Q-ANYPGMLVWAVA--SS-------ILQGDIPA 240 (368)
T ss_dssp TSCEE-------------EECCSSCCCCEECCCCSCTTSCBCSCCE-E-ETTTTEEEECBS--SC-------CEEEECCS
T ss_pred CCEEE-------------EECccccccCCeEEEEeeeeeeCCCCcc-c-cccCCEEEEEcC--CE-------EEEEECCC
Confidence 77777 67765 332210 00000000 2 333332222221 11 11111100
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCC-Cc---ccccccCceeEEEcCCCCcccceEEEEE-e---C-----C
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRS-GT---CVPVSVSRTSLSILPQSPMLCFILTTSS-S---A-----D 301 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~-~~---~~~~~~~I~slafSPdg~~~~~~lLatg-s---~-----D 301 (845)
... . +-. .+... .. ..........++++||++ .+.++ . . +
T Consensus 241 ~~~-----------------~---v~~--~~~~~~~~~~~~~~~p~g~~~v~~s~dg~-----~lyV~~~~~~~~~~~~~ 293 (368)
T 1mda_H 241 AGA-----------------T---MKA--AIDGNESGRKADNFRSAGFQMVAKLKNTD-----GIMILTVEHSRSCLAAA 293 (368)
T ss_dssp SCC-----------------E---EEC--CCCSSCTHHHHTTEEECSSSCEEEETTTT-----EEEEEEEECSSCTTSCE
T ss_pred Ccc-----------------e---EEE--EEEeccccccccccccCcceeeEEcCCCC-----EEEEEeccccCcccccC
Confidence 000 0 000 00000 00 000011122367888877 44443 3 2 2
Q ss_pred CeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCE-EEEEe-CCC-EEEEEecCCceEEEecCCCCCeEEEEEc
Q psy467 302 RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGEC-LLGGD-TEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT 372 (845)
Q Consensus 302 G~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~-Lasgs-~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS 372 (845)
+.+.++|+.+++.+.++.... ....++|+|||+. +++.. .++ |.++|+.+++.+.++..... ...+++.
T Consensus 294 ~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~ 365 (368)
T 1mda_H 294 ENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQ 365 (368)
T ss_dssp EEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECC
T ss_pred CCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEee
Confidence 356699999999988887532 5889999999985 45555 467 99999999999999875533 3455543
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.08 E-value=1.7e-08 Score=108.26 Aligned_cols=240 Identities=12% Similarity=0.026 Sum_probs=142.8
Q ss_pred eEEEecCCCCCeEEEEEcCCCC-EEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEE
Q psy467 50 CIMSLSGHSTPVESVQFGNGEE-TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128 (845)
Q Consensus 50 ~i~~l~~h~~~V~sLafSpdg~-~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWD 128 (845)
.+..+...........|+++++ .+++...++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|+
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 4445555666788999999998 5566666889999998 454 344444566789999999999666655667899999
Q ss_pred CCCCceEEEEcCC----CCCeEEEEEecCCCEEEE----EeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcc
Q psy467 129 LRRKGCIYTYRGH----SKSINSIRFSPDGQWIAS----GGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSS 200 (845)
Q Consensus 129 l~t~~~l~~~~~h----~~~V~sLafSPdg~~Las----gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~s 200 (845)
.. ++........ ...+.+++++++|+++++ |..+..-............|+.||..+++.
T Consensus 114 ~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~----------- 181 (305)
T 3dr2_A 114 AD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL----------- 181 (305)
T ss_dssp TT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-----------
T ss_pred CC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-----------
Confidence 86 5533222111 134667889998887765 221100000000000011122244433332
Q ss_pred eeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCcee
Q psy467 201 VPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTS 280 (845)
Q Consensus 201 vs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~s 280 (845)
.... . ......
T Consensus 182 ---------~~~~-~-----------------------------------------------------------~~~p~g 192 (305)
T 3dr2_A 182 ---------QRMA-D-----------------------------------------------------------LDHPNG 192 (305)
T ss_dssp ---------EEEE-E-----------------------------------------------------------ESSEEE
T ss_pred ---------EEEe-c-----------------------------------------------------------CCCCcc
Confidence 1100 0 011234
Q ss_pred EEEcCCCCcccceEEEEEeCC------CeEEEEECCCCeE--EEEe-cCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEec
Q psy467 281 LSILPQSPMLCFILTTSSSAD------RTVNFWDLEKFSL--VSTT-EKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351 (845)
Q Consensus 281 lafSPdg~~~~~~lLatgs~D------G~I~IWDl~s~~~--l~tl-~gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~ 351 (845)
++|+||++ .|+.+... +.|++||+..... ...+ ....+....++++++|+ |.+++.++|.+|+.
T Consensus 193 l~~spdg~-----~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~gv~~~~~- 265 (305)
T 3dr2_A 193 LAFSPDEQ-----TLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGTGVCVFDS- 265 (305)
T ss_dssp EEECTTSS-----EEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCSSEEEEECT-
T ss_pred eEEcCCCC-----EEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecCCcEEEECC-
Confidence 55566655 56665554 7899999876541 1111 11234456789999999 44455556999997
Q ss_pred CCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 352 PARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 352 tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
.++.+..+..+. .+.+++|+ +++.|.++
T Consensus 266 ~g~~~~~~~~~~-~~~~~~f~~d~~~L~it 294 (305)
T 3dr2_A 266 DGQLLGHIPTPG-TASNCTFDQAQQRLFIT 294 (305)
T ss_dssp TSCEEEEEECSS-CCCEEEECTTSCEEEEE
T ss_pred CCCEEEEEECCC-ceeEEEEeCCCCEEEEE
Confidence 567777776655 58999998 77666554
No 220
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.07 E-value=2.9e-08 Score=119.45 Aligned_cols=295 Identities=12% Similarity=0.112 Sum_probs=173.3
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCC--CCCeEEEEEcC---CCCEEEEEE------CCCcEEEEECCCCcEEEEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGH--STPVESVQFGN---GEETLSAGC------QSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h--~~~V~sLafSp---dg~~LaSgs------~DGtV~VWDl~tg~~v~~l 96 (845)
+..|++++.|+.|..+|..+|+.+..+... ......+..+| ++ .+++++ .+|.|..||..+|+.+..+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 457888889999999999999998877642 11111111122 44 444443 3689999999999998877
Q ss_pred cCCC-------------------------------CCeEEEEEccCCCEEEEEECCCe-------------------EEE
Q psy467 97 NGHK-------------------------------SSITSVDFHPYGDYLCSGSLDSF-------------------IKL 126 (845)
Q Consensus 97 ~~h~-------------------------------~~V~~lafspdg~~Lasgs~DG~-------------------I~I 126 (845)
.... .....++++|++..++.++.++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 5211 00125788898889999887764 999
Q ss_pred EECCCCceEEEEcCCC---------CCeEEEEEecCCC---EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCC
Q psy467 127 WDLRRKGCIYTYRGHS---------KSINSIRFSPDGQ---WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP 194 (845)
Q Consensus 127 WDl~t~~~l~~~~~h~---------~~V~sLafSPdg~---~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~ 194 (845)
||..+++.+..+.... ..+.......+|+ .++.++.+|.+++ +|..+|+.+
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~-------------lD~~tG~~l---- 342 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYV-------------IDRATGELL---- 342 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEE-------------EETTTCCEE----
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEE-------------EECCCCCEe----
Confidence 9999999998886421 1222223333565 6888889999999 999999883
Q ss_pred CCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCccccc
Q psy467 195 PQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPV 274 (845)
Q Consensus 195 ~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~ 274 (845)
......... + ...+....... .......+. .... ......|... -
T Consensus 343 ----------------~~~~~~~~~-----w-~~~~~~~~~~p-i~~~~~~~~-~~~~--~~~~~~p~~~---------G 387 (689)
T 1yiq_A 343 ----------------SAKGIVPQS-----W-TKGMDMKTGRP-ILDEENAAY-WKNG--KRNLVTPAFW---------G 387 (689)
T ss_dssp ----------------EEEESSCCS-----S-EEEEETTTTEE-EECHHHHCT-TTSS--SCEEESSCTT---------C
T ss_pred ----------------ccccccccc-----c-ccccCccCCCc-ccchhhccc-cCCC--CeeEeCCCcc---------c
Confidence 211111000 0 00000000000 000000000 0000 0000111000 0
Q ss_pred ccCceeEEEcCCCCcccceEEEEEe---------------------------------------------CCCeEEEEEC
Q psy467 275 SVSRTSLSILPQSPMLCFILTTSSS---------------------------------------------ADRTVNFWDL 309 (845)
Q Consensus 275 ~~~I~slafSPdg~~~~~~lLatgs---------------------------------------------~DG~I~IWDl 309 (845)
...-..++++|+.. ++++.. .+|.|..||+
T Consensus 388 g~~w~~~a~dp~~~-----~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~ 462 (689)
T 1yiq_A 388 AHDWQPMSYNPDTG-----LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDP 462 (689)
T ss_dssp SSCSSCCEEETTTT-----EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEET
T ss_pred ccCCCcceECCCCC-----EEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEEC
Confidence 00012244444444 333321 1478999999
Q ss_pred CCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCC-eEEEEEc-CCceEEEEE
Q psy467 310 EKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGK-VQDLAVT-GTQLWFRRV 381 (845)
Q Consensus 310 ~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~-VtsVafS-dg~lLaaSV 381 (845)
.+++.+..+..+. ++..-.++..|..+++++.|+ |+.||.++|+.+-.+....+. ..-+.|. +|+.+++..
T Consensus 463 ~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 463 VKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp TTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEE
Confidence 9999998887543 333346667788999999999 999999999999887754432 3456776 777655543
No 221
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.07 E-value=4.3e-09 Score=117.79 Aligned_cols=169 Identities=9% Similarity=0.043 Sum_probs=124.6
Q ss_pred CeEEEEEccCCCEEEEEECCCeEEEEECCCCc-----------eEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEee
Q psy467 102 SITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG-----------CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170 (845)
Q Consensus 102 ~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~-----------~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~ 170 (845)
++..+++++...++++|+.++ +.+|++.+.. ..... .+.. |.+++| |+++|+++ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v-- 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYS-- 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEE--
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEE--
Confidence 689999999999999999885 5669875332 11222 2556 999999 89999998 8899999
Q ss_pred eeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhcc
Q psy467 171 SFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIA 250 (845)
Q Consensus 171 ~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~ 250 (845)
||+.+... ......+... +
T Consensus 111 -----------~dv~sl~~--------------------~~~~~~~~~~-------v----------------------- 129 (388)
T 1xip_A 111 -----------LDLEELSE--------------------FRTVTSFEKP-------V----------------------- 129 (388)
T ss_dssp -----------EESSSTTC--------------------EEEEEECSSC-------E-----------------------
T ss_pred -----------EEchhhhc--------------------cCccceeecc-------e-----------------------
Confidence 99987654 2222222222 2
Q ss_pred CCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEE
Q psy467 251 NPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTF 330 (845)
Q Consensus 251 ~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vtslaf 330 (845)
..+.+. .. -+++++.||.|.+||+.++.... +...|+|++|
T Consensus 130 ----~~i~~~--~p-----------------------------~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~W 170 (388)
T 1xip_A 130 ----FQLKNV--NN-----------------------------TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDV 170 (388)
T ss_dssp ----EEEEEC--SS-----------------------------EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEE
T ss_pred ----eeEEec--CC-----------------------------CEEEEECCCCEEEEEccCCcccc----ccCCceEEEE
Confidence 222221 11 36777899999999999887654 3357999999
Q ss_pred eCCCCEEEEEeCCC-EEEEEecCCce--EEEe------c---CCCCCeEEEEEc-CCceEEEE
Q psy467 331 SEGGECLLGGDTEG-LKVYGWEPARQ--YDAQ------P---MGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 331 SpdG~~Lasgs~DG-I~IWDl~tgk~--l~tl------~---~h~~~VtsVafS-dg~lLaaS 380 (845)
||+| ++.|..|| +++|+.+.+++ ..++ . +|...|.+|.|. +++++++.
T Consensus 171 SpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 171 TNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp CSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9999 67888999 99999988775 5566 3 477889999999 77777654
No 222
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.06 E-value=2.6e-08 Score=119.71 Aligned_cols=288 Identities=11% Similarity=0.074 Sum_probs=176.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCC-C----CCeEE-EEEcCCCCEEEEEEC------CCcEEEEECCCCcEEEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGH-S----TPVES-VQFGNGEETLSAGCQ------SGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h-~----~~V~s-LafSpdg~~LaSgs~------DGtV~VWDl~tg~~v~~ 95 (845)
+..|++++.|+.|..+|..+|+.+..+..+ . ..+.+ ... .+..+++++. +|.|..||..+|+.+..
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 467888889999999999999999888754 2 11111 111 2345555543 68999999999999988
Q ss_pred EcCCCCC--------------------------------eEEEEEccCCCEEEEEECCC-------------------eE
Q psy467 96 LNGHKSS--------------------------------ITSVDFHPYGDYLCSGSLDS-------------------FI 124 (845)
Q Consensus 96 l~~h~~~--------------------------------V~~lafspdg~~Lasgs~DG-------------------~I 124 (845)
+...... ...+++++++..++.++.++ .|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 7542211 13578889888998887664 59
Q ss_pred EEEECCCCceEEEEcCCC---------CCeEEEEEecCC---CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCC
Q psy467 125 KLWDLRRKGCIYTYRGHS---------KSINSIRFSPDG---QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT 192 (845)
Q Consensus 125 ~IWDl~t~~~l~~~~~h~---------~~V~sLafSPdg---~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~ 192 (845)
..+|..+++.+..+.... .....+....+| ..++.++.+|.+++ +|..+|+.+
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~-------------lD~~tG~~l-- 350 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFV-------------LDRTNGKFI-- 350 (677)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEE-------------EETTTCCEE--
T ss_pred EEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEE-------------EECCCCCEe--
Confidence 999999999998876421 122333444467 67888899999999 999999883
Q ss_pred CCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeec-ccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcc
Q psy467 193 PPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIE-ENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTC 271 (845)
Q Consensus 193 ~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~-~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~ 271 (845)
..+...... + ...++ ...... ..... . .+ ......|...
T Consensus 351 ------------------~~~~~~~~~-----~-~~~~d~~g~~~~--~~~~~---~-~~---~~~~~~P~~~------- 390 (677)
T 1kb0_A 351 ------------------SAKNFVPVN-----W-ASGYDKHGKPIG--IAAAR---D-GS---KPQDAVPGPY------- 390 (677)
T ss_dssp ------------------EEEESSCCS-----S-EEEECTTSCEEE--CGGGG---C-TT---SCEECSSCTT-------
T ss_pred ------------------ccccccccC-----c-ccccCCCCceee--ccccC---c-CC---CccEECcCcc-------
Confidence 222111000 0 00000 000000 00000 0 00 0000001000
Q ss_pred cccccCceeEEEcCCCCcccceEEEEEeC-------------------------------------------CCeEEEEE
Q psy467 272 VPVSVSRTSLSILPQSPMLCFILTTSSSA-------------------------------------------DRTVNFWD 308 (845)
Q Consensus 272 ~~~~~~I~slafSPdg~~~~~~lLatgs~-------------------------------------------DG~I~IWD 308 (845)
-...-..++++|++. ++++... .|.|..||
T Consensus 391 --G~~~w~~~a~dp~~~-----~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D 463 (677)
T 1kb0_A 391 --GAHNWHPMSFNPQTG-----LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWD 463 (677)
T ss_dssp --CSSCSSCCEEETTTT-----EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEE
T ss_pred --cccCCCCceEcCCCC-----EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEe
Confidence 000012455555554 4444322 27899999
Q ss_pred CCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCC-CCeEEEEEc-CCceEEEE
Q psy467 309 LEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGW-GKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 309 l~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~-~~VtsVafS-dg~lLaaS 380 (845)
+.+++.+..+.. ..++....++.+|..+++++.|+ +++||..+++.+..+.... ....-+.|. +|+.+++.
T Consensus 464 ~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 464 PVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp TTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CCCCcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEE
Confidence 999999888763 33455556777888999999999 9999999999998887543 334456666 77655544
No 223
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.04 E-value=7.9e-09 Score=124.31 Aligned_cols=225 Identities=11% Similarity=0.112 Sum_probs=142.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEEC-----CCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC--------
Q psy467 56 GHSTPVESVQFGNGEETLSAGCQ-----SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS-------- 122 (845)
Q Consensus 56 ~h~~~V~sLafSpdg~~LaSgs~-----DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG-------- 122 (845)
+|...+..++|||||++||.+.. ...|++||+.+++.+.... +......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 35567889999999999885432 3579999999998654311 11113567899 999999888774
Q ss_pred -----eEEEEECCCCc----eEEEEcC-CCCCeEEEEEecCCCEEEEEeCC----CcEEEeeeeccCCceeEEEECCCCc
Q psy467 123 -----FIKLWDLRRKG----CIYTYRG-HSKSINSIRFSPDGQWIASGGED----GVVRIGASFHLTNTSIHVVDLSLVH 188 (845)
Q Consensus 123 -----~I~IWDl~t~~----~l~~~~~-h~~~V~sLafSPdg~~Lasgs~D----G~I~I~~~~~~~~~~I~vWDl~tg~ 188 (845)
.|++|++.++. ++..... +...+.++.|+|||++|+..... ..+++ +|+.++.
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~-------------~d~~~~~ 270 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYV-------------KDLSQEN 270 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEE-------------EETTSTT
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEE-------------EECCCCC
Confidence 39999998764 2333333 44557889999999988654432 35556 8887653
Q ss_pred cCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCC
Q psy467 189 PLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRS 268 (845)
Q Consensus 189 ~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~ 268 (845)
. . ...+..+... . ... +++++.
T Consensus 271 ~------------------~-~~~l~~~~~~-------~---------------------------~~~-~~~~g~---- 292 (693)
T 3iuj_A 271 A------------------P-LLTVQGDLDA-------D---------------------------VSL-VDNKGS---- 292 (693)
T ss_dssp C------------------C-CEEEECSSSS-------C---------------------------EEE-EEEETT----
T ss_pred C------------------c-eEEEeCCCCc-------e---------------------------EEE-EeccCC----
Confidence 2 0 1222222221 1 111 334433
Q ss_pred CcccccccCceeEEEcCCCCcccceEEEEEeCC---CeEEEEECCCCeE--EEEecCCCCCEEEEEEeCCCCEEEEEeC-
Q psy467 269 GTCVPVSVSRTSLSILPQSPMLCFILTTSSSAD---RTVNFWDLEKFSL--VSTTEKNSSTIRRLTFSEGGECLLGGDT- 342 (845)
Q Consensus 269 ~~~~~~~~~I~slafSPdg~~~~~~lLatgs~D---G~I~IWDl~s~~~--l~tl~gh~~~VtslafSpdG~~Lasgs~- 342 (845)
. +++.+..+ +.|..+|+.++.. ...+..|...+. .|++++++|+....
T Consensus 293 --------------------~----l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~ 346 (693)
T 3iuj_A 293 --------------------T----LYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMV 346 (693)
T ss_dssp --------------------E----EEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEE
T ss_pred --------------------E----EEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEE
Confidence 1 44444333 6899999987654 345555655555 89999998876654
Q ss_pred CC---EEEEEecCCceEEEec-CCCCCeEEEEEc-CCceEEEE
Q psy467 343 EG---LKVYGWEPARQYDAQP-MGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 343 DG---I~IWDl~tgk~l~tl~-~h~~~VtsVafS-dg~lLaaS 380 (845)
++ |++|+++.+ ....+. .+.+.+..+.++ ++..++.+
T Consensus 347 ~g~~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~ 388 (693)
T 3iuj_A 347 DATARVEQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFG 388 (693)
T ss_dssp TTEEEEEEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEE
T ss_pred CCeeEEEEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEE
Confidence 44 888888754 444443 244567777887 77666555
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.02 E-value=1.8e-08 Score=110.20 Aligned_cols=253 Identities=8% Similarity=0.002 Sum_probs=149.5
Q ss_pred CCeEEEEEcCCCCEEEEEEC--CCcEEEEECCCCcEEEEEc-------CCCCCeEEEEEccCCCEEEEEEC-----CCeE
Q psy467 59 TPVESVQFGNGEETLSAGCQ--SGSIKIWNLAVPTVQRTLN-------GHKSSITSVDFHPYGDYLCSGSL-----DSFI 124 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSgs~--DGtV~VWDl~tg~~v~~l~-------~h~~~V~~lafspdg~~Lasgs~-----DG~I 124 (845)
..+..++++++|+.+++... ++.++||.+.+++ +..+. .+...+..++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 67899999999999888642 3435566655554 33332 23457899999999875555433 5789
Q ss_pred EEEECCCCceEEEEcCC------CCCeEEEEEecCCCEEEEE-e---CCCcEEEeeeeccCCceeEEEECCCCccCCCCC
Q psy467 125 KLWDLRRKGCIYTYRGH------SKSINSIRFSPDGQWIASG-G---EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP 194 (845)
Q Consensus 125 ~IWDl~t~~~l~~~~~h------~~~V~sLafSPdg~~Lasg-s---~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~ 194 (845)
.+||+.+++.+..+... ...+..+++++++..++.+ . .++.|.+ ||+.+++.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v-------------~d~~~g~~----- 157 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIR-------------VDLQTGLA----- 157 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEE-------------EETTTCCE-----
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEE-------------EECCCCCE-----
Confidence 99999998877766532 2356889999865554444 3 4677888 99887765
Q ss_pred CCCCcceeecCCCCeEEEEecCCCCCcc-ceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccc
Q psy467 195 PQYTSSVPFSHNTSLRKSFTKGRPGGTK-AKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVP 273 (845)
Q Consensus 195 ~~~i~svs~spdg~~l~~~~~h~~~~~~-~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~ 273 (845)
...+.+|...... ..+.+ .+ . .....++++. ...
T Consensus 158 ---------------~r~~~~~~~~~~~~~~~~~------------~g--~----------~~~~~~~~g~------~~~ 192 (343)
T 2qe8_A 158 ---------------ARVLQGYPGIAPEDIDLVI------------DG--V----------PVQIGQPDGT------VIR 192 (343)
T ss_dssp ---------------EEECTTCTTTSCCSCCCEE------------TT--E----------ECBEECTTSC------EEC
T ss_pred ---------------EEEecCCCcccccccceeE------------CC--E----------EEEeccCCCc------eec
Confidence 2222111110000 00000 00 0 0000112221 011
Q ss_pred cccCceeEEEcCCCCcccceEEEEEeCCC-eEEEEECC---CCe-----EEE--EecCCCCCEEEEEEeCCCCEEEEEeC
Q psy467 274 VSVSRTSLSILPQSPMLCFILTTSSSADR-TVNFWDLE---KFS-----LVS--TTEKNSSTIRRLTFSEGGECLLGGDT 342 (845)
Q Consensus 274 ~~~~I~slafSPdg~~~~~~lLatgs~DG-~I~IWDl~---s~~-----~l~--tl~gh~~~VtslafSpdG~~Lasgs~ 342 (845)
....+..++|+|||+ .|+.+..++ .+..++.. .+. ... ...++.+....++++++|.+.++...
T Consensus 193 ~~~~~~gia~s~dg~-----~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~ 267 (343)
T 2qe8_A 193 PHLGVNGIVLDAENE-----WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLA 267 (343)
T ss_dssp CCCCEEEEEECTTSC-----EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGG
T ss_pred eecccceeEeccCCC-----EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccC
Confidence 112456788888887 666666555 55555532 110 000 11123345677999999998888887
Q ss_pred CC-EEEEEecCCceEEEecC-CCCCeEEEEEc-CCceEEEE
Q psy467 343 EG-LKVYGWEPARQYDAQPM-GWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 343 DG-I~IWDl~tgk~l~tl~~-h~~~VtsVafS-dg~lLaaS 380 (845)
++ |.+||..+++....... +...+++++|. ++++++++
T Consensus 268 ~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~ 308 (343)
T 2qe8_A 268 HSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDC 308 (343)
T ss_dssp GTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEE
T ss_pred CCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEe
Confidence 88 99999856654333322 24578999998 77766655
No 225
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.99 E-value=2.3e-10 Score=127.23 Aligned_cols=143 Identities=14% Similarity=0.031 Sum_probs=84.5
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCC-eE-
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS-IT- 104 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~-V~- 104 (845)
++..+++++.||.|+.||..+|+.+.++.. ..+.+..+..++..+++++.||.|..||..+|+.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 567899999999999999999999988875 55666666677778888889999999999999877666533111 10
Q ss_pred EEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEEC
Q psy467 105 SVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDL 184 (845)
Q Consensus 105 ~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl 184 (845)
...+. ++..+++++.++.|+.||..+|+.+..+..+. ...++|++..+++++.|+.++. ||.
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a-------------~d~ 147 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITM-------------YDT 147 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEEC-------------CCS
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEE-------------EEC
Confidence 01111 34577888889999999999999988876543 2455678888999999999999 999
Q ss_pred CCCcc
Q psy467 185 SLVHP 189 (845)
Q Consensus 185 ~tg~~ 189 (845)
.+++.
T Consensus 148 ~tG~~ 152 (369)
T 2hz6_A 148 KTREL 152 (369)
T ss_dssp SSSSC
T ss_pred CCCCE
Confidence 98877
No 226
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.94 E-value=2.4e-08 Score=113.07 Aligned_cols=253 Identities=9% Similarity=-0.022 Sum_probs=162.5
Q ss_pred CCCCEEEEEECC-----CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEE----------CCCeEEEEECCCC
Q psy467 68 NGEETLSAGCQS-----GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGS----------LDSFIKLWDLRRK 132 (845)
Q Consensus 68 pdg~~LaSgs~D-----GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs----------~DG~I~IWDl~t~ 132 (845)
++++.+++.... +.|.++|..+++.+.++.....+ .++++||+++++++. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 467777666553 69999999999999999865555 899999999888776 3678999999999
Q ss_pred ceEEEEcCC-------CCCeEEEEEecCCCEEEEEeC--CCcEEEeeeeccCCceeEEEECCCCccCCCCCCCC------
Q psy467 133 GCIYTYRGH-------SKSINSIRFSPDGQWIASGGE--DGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQY------ 197 (845)
Q Consensus 133 ~~l~~~~~h-------~~~V~sLafSPdg~~Lasgs~--DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~------ 197 (845)
+.+..+... ......++|+|||++++++.. ++.|.+ +|+.+++.+..+.-..
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsV-------------ID~~t~kvv~~I~v~g~~~~~p 226 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGV-------------VDLEGKTFDRMLDVPDCYHIFP 226 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEE-------------EETTTTEEEEEEECCSEEEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEE-------------EECCCCeEEEEEEcCCceeecc
Confidence 988887532 234567899999999998874 577888 9999888744332111
Q ss_pred ---CcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCccccc
Q psy467 198 ---TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPV 274 (845)
Q Consensus 198 ---i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~ 274 (845)
...+.++++|+.+..-. .... + .. ... . .+..
T Consensus 227 ~g~~~~v~~~~dG~~~~V~~-~~~~-------v---------------------------~~-~~~---~------~~~v 261 (426)
T 3c75_H 227 ASPTVFYMNCRDGSLARVDF-ADGE-------T---------------------------KV-TNT---E------VFHT 261 (426)
T ss_dssp EETTEEEEEETTSSEEEEEC-CTTC-------C---------------------------EE-EEC---C------CCSC
T ss_pred CCCcEEEEEcCCCCEEEEEC-CCCc-------E---------------------------EE-Eee---e------eecc
Confidence 11122333333221111 0000 0 00 000 0 0000
Q ss_pred -ccC-ceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEE--EEecC----------CCCCEEEEEEeCCCCEEEEE
Q psy467 275 -SVS-RTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV--STTEK----------NSSTIRRLTFSEGGECLLGG 340 (845)
Q Consensus 275 -~~~-I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l--~tl~g----------h~~~VtslafSpdG~~Lasg 340 (845)
..+ ...+.+++++. .++..+..+.|.+.|+...... ..+.- .......++++++++.++++
T Consensus 262 ~~~p~~~~~~~~~dg~-----~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa 336 (426)
T 3c75_H 262 EDELLINHPAFSLRSG-----RLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLL 336 (426)
T ss_dssp TTSCBCSCCEECTTTC-----EEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEE
T ss_pred CCCceeeEeeecCCCC-----EEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEE
Confidence 001 12346677776 5555567889999998755422 11110 01122237899999988776
Q ss_pred eC----------CC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCc-eEEEE------EEEEee
Q psy467 341 DT----------EG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQ-LWFRR------VGTWSH 386 (845)
Q Consensus 341 s~----------DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~-lLaaS------VsiW~~ 386 (845)
.. .+ |.++|..+.+.+.++... ....+++|+ ||+ +++++ |+++..
T Consensus 337 ~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 337 VDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred ecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence 42 23 999999999999888643 258899999 888 77766 777654
No 227
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.93 E-value=1.8e-06 Score=94.89 Aligned_cols=284 Identities=11% Similarity=0.011 Sum_probs=165.8
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCC---------CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcC
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGH---------STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG 98 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h---------~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~ 98 (845)
+..+++++.++.|..||..+++.+...... ...+.+. ...++..+++++.++.|..+|..+|+.+.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 467888888999999999999988776542 2223222 222456788888999999999999998877764
Q ss_pred CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCe-----EEEEEecCCCEEEEEeCCCcEEEeeeec
Q psy467 99 HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI-----NSIRFSPDGQWIASGGEDGVVRIGASFH 173 (845)
Q Consensus 99 h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V-----~sLafSPdg~~Lasgs~DG~I~I~~~~~ 173 (845)
........... +..+++++.++.|..+|..+++.+..+....... ...... +..+++++.++.+..
T Consensus 132 ~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~----- 202 (376)
T 3q7m_A 132 AGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSA----- 202 (376)
T ss_dssp SSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEE-----
T ss_pred CCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEE-----
Confidence 43222222222 4578888999999999999999988876432211 122222 456777777888888
Q ss_pred cCCceeEEEECCCCccCCCCCCCC------------CcceeecCCCCeEEEEecCCCCCccceeeEeeeccccccccccc
Q psy467 174 LTNTSIHVVDLSLVHPLGTPPPQY------------TSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAG 241 (845)
Q Consensus 174 ~~~~~I~vWDl~tg~~l~~~~~~~------------i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~ 241 (845)
+|..+++.+....... +.......++. +.. .....
T Consensus 203 --------~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-v~~-~~~~g----------------------- 249 (376)
T 3q7m_A 203 --------VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGV-VFA-LAYNG----------------------- 249 (376)
T ss_dssp --------EETTTCCEEEEEECCC-----------CCCCCCEEETTE-EEE-ECTTS-----------------------
T ss_pred --------EECCCCcEEEEEecccCCCCcccccccccCCCcEEECCE-EEE-EecCc-----------------------
Confidence 8887776632111000 00000000111 000 00000
Q ss_pred chhhhhhccCCCceeEEEcCC-CCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecC
Q psy467 242 EEELFATIANPCDYSAIFQPH-RSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEK 320 (845)
Q Consensus 242 ~~~l~~~~~~~~~~~l~fspd-g~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~g 320 (845)
...++++. +...-.. .......+... +. .+..++.++.|..+|..+++.+.....
T Consensus 250 -------------~l~~~d~~tG~~~w~~----~~~~~~~~~~~--~~-----~l~~~~~~g~l~~~d~~tG~~~w~~~~ 305 (376)
T 3q7m_A 250 -------------NLTALDLRSGQIMWKR----ELGSVNDFIVD--GN-----RIYLVDQNDRVMALTIDGGVTLWTQSD 305 (376)
T ss_dssp -------------CEEEEETTTCCEEEEE----CCCCEEEEEEE--TT-----EEEEEETTCCEEEEETTTCCEEEEECT
T ss_pred -------------EEEEEECCCCcEEeec----cCCCCCCceEE--CC-----EEEEEcCCCeEEEEECCCCcEEEeecc
Confidence 11222221 1100000 00112223332 33 677778899999999999998877762
Q ss_pred -CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEecCCCCCe-EEEEEcCCceEEEE
Q psy467 321 -NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKV-QDLAVTGTQLWFRR 380 (845)
Q Consensus 321 -h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~V-tsVafSdg~lLaaS 380 (845)
....+..... .+..|++++.+| |.++|..+++.+.........+ ......++.+++.+
T Consensus 306 ~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~ 366 (376)
T 3q7m_A 306 LLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQA 366 (376)
T ss_dssp TTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEB
T ss_pred cCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEe
Confidence 2222333333 256788889898 9999999999887776533333 22333466655544
No 228
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.82 E-value=4.5e-08 Score=104.72 Aligned_cols=250 Identities=13% Similarity=0.085 Sum_probs=145.6
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l 96 (845)
.+.++...+ ++. |.+++.+ |..+|. +++.+..+...........+. +..|..++.++.|..+|.. ++.....
T Consensus 61 ~~~~~~~~~-~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~ 132 (330)
T 3hxj_A 61 IECRPSIGK-DGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRF 132 (330)
T ss_dssp EEECCEETT-TTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEE
T ss_pred cccceEEec-CCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEE
Confidence 345556554 443 4444433 777775 444433332222222223333 4566777778888888887 7766666
Q ss_pred cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCC
Q psy467 97 NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN 176 (845)
Q Consensus 97 ~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~ 176 (845)
..+...+.++...+++. ++.++.++.|..+|.. ++.+..+......+.++...+++.+++ ++ +.+..
T Consensus 133 ~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~-------- 199 (330)
T 3hxj_A 133 KTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYA-------- 199 (330)
T ss_dssp ECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEE--------
T ss_pred cCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEE--------
Confidence 55555556666666665 5556777888888887 777666665555566677766666443 33 55666
Q ss_pred ceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCcee
Q psy467 177 TSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYS 256 (845)
Q Consensus 177 ~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 256 (845)
+| .+++. +.......
T Consensus 200 -----~d-~~g~~--------------------~~~~~~~~--------------------------------------- 214 (330)
T 3hxj_A 200 -----IN-PDGTE--------------------KWNFYAGY--------------------------------------- 214 (330)
T ss_dssp -----EC-TTSCE--------------------EEEECCSS---------------------------------------
T ss_pred -----EC-CCCcE--------------------EEEEccCC---------------------------------------
Confidence 66 44443 21111100
Q ss_pred EEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCE
Q psy467 257 AIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGEC 336 (845)
Q Consensus 257 l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~ 336 (845)
..+.+++..++|. +..++.++.|..+|. +++.+..+......+.++.+.++|.
T Consensus 215 -------------------~~~~~~~~~~~g~------l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~- 267 (330)
T 3hxj_A 215 -------------------WTVTRPAISEDGT------IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT- 267 (330)
T ss_dssp -------------------CCCSCCEECTTSC------EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-
T ss_pred -------------------cceeceEECCCCe------EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe-
Confidence 1123333444443 455666788888874 5666666654444455566666664
Q ss_pred EEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc-CCceEEEE
Q psy467 337 LLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 337 Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS-dg~lLaaS 380 (845)
|..++.++ |..+|. +++.+..+......+.++... +|++++.+
T Consensus 268 l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt 312 (330)
T 3hxj_A 268 IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGT 312 (330)
T ss_dssp EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEEC
T ss_pred EEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEc
Confidence 55667776 888885 677776666566677788886 77766655
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.82 E-value=8.1e-10 Score=122.78 Aligned_cols=187 Identities=12% Similarity=0.067 Sum_probs=111.7
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCC-eE-
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS-IN- 146 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~-V~- 146 (845)
++..|++++.||.|..||..+|+.+..+.. +.+.+..+..++..+++++.||.|+.||..+++.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 578899999999999999999999988875 45655556677777888889999999999998887766533111 10
Q ss_pred EEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceee
Q psy467 147 SIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKID 226 (845)
Q Consensus 147 sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~ 226 (845)
+..+. ++..+++++.|+.++. ||..+|+. +..+..+.
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a-------------~D~~tG~~--------------------~w~~~~~~--------- 122 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYV-------------IDLLTGEK--------------------QQTLSSAF--------- 122 (369)
T ss_dssp CSCC------CCCCEEEEEEEE-------------ECCC-----------------------------------------
T ss_pred CceEe-cCCEEEEEeCCCEEEE-------------EECCCCcE--------------------EEEecCCC---------
Confidence 01111 3456777888888988 99998887 22211110
Q ss_pred EeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEE
Q psy467 227 VTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNF 306 (845)
Q Consensus 227 V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~I 306 (845)
...++|++. .+++++.|+.|+.
T Consensus 123 -----------------------------~~~~~p~~~-----------------------------~v~~~~~dg~v~a 144 (369)
T 2hz6_A 123 -----------------------------ADSLSPSTS-----------------------------LLYLGRTEYTITM 144 (369)
T ss_dssp --------------------------------------------------------------------EEEEEEEEEEEC
T ss_pred -----------------------------cccccccCC-----------------------------EEEEEecCCEEEE
Confidence 001122333 7888888999999
Q ss_pred EECCCCeEEEEecCCCCCEEEEEEeCCC---CEEEEEeCCC-EEEEEecCCceEEEec
Q psy467 307 WDLEKFSLVSTTEKNSSTIRRLTFSEGG---ECLLGGDTEG-LKVYGWEPARQYDAQP 360 (845)
Q Consensus 307 WDl~s~~~l~tl~gh~~~VtslafSpdG---~~Lasgs~DG-I~IWDl~tgk~l~tl~ 360 (845)
||..+++.+..+..+. ....+++.++ ..+++++.++ |+.||..+|+.+-...
T Consensus 145 ~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 145 YDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp CCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred EECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 9999998766554221 1223334432 4577788888 9999999998876665
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.81 E-value=3.5e-07 Score=109.80 Aligned_cols=133 Identities=13% Similarity=0.127 Sum_probs=92.2
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCCC-----------eEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP-----------VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~-----------V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l 96 (845)
+..|++++.++.|.-+|..+|+.+.++...... ...+++ ++..|++++.|+.|..+|..+|+.+..+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 356777777889999999999999887643210 112233 4568888889999999999999999888
Q ss_pred cCC-C----CCeEE-EEEccCCCEEEEEEC------CCeEEEEECCCCceEEEEcCCCCC--------------------
Q psy467 97 NGH-K----SSITS-VDFHPYGDYLCSGSL------DSFIKLWDLRRKGCIYTYRGHSKS-------------------- 144 (845)
Q Consensus 97 ~~h-~----~~V~~-lafspdg~~Lasgs~------DG~I~IWDl~t~~~l~~~~~h~~~-------------------- 144 (845)
..+ . ..+.. ... .+..+++++. +|.|+.||..+++.+..+......
T Consensus 155 ~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~ 232 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPS 232 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred cCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccccc
Confidence 754 2 11211 111 2345555553 689999999999999887643211
Q ss_pred ------------eEEEEEecCCCEEEEEeCCC
Q psy467 145 ------------INSIRFSPDGQWIASGGEDG 164 (845)
Q Consensus 145 ------------V~sLafSPdg~~Lasgs~DG 164 (845)
...++++|++..++.+..++
T Consensus 233 g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~ 264 (677)
T 1kb0_A 233 GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNG 264 (677)
T ss_dssp GCHHHHCEECCCCSCEEEETTTTEEEEECCCE
T ss_pred CceeEeCCCcccccceeEcCCCCEEEEECCCC
Confidence 12467888888888777654
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.80 E-value=1.4e-06 Score=98.37 Aligned_cols=224 Identities=13% Similarity=0.096 Sum_probs=144.9
Q ss_pred CCCCEEEEEE-CCCcEEEEECCCC----cEEEEEc-------CCCCCeEEEEEccCCCEEEEEECC------CeEEEEEC
Q psy467 68 NGEETLSAGC-QSGSIKIWNLAVP----TVQRTLN-------GHKSSITSVDFHPYGDYLCSGSLD------SFIKLWDL 129 (845)
Q Consensus 68 pdg~~LaSgs-~DGtV~VWDl~tg----~~v~~l~-------~h~~~V~~lafspdg~~Lasgs~D------G~I~IWDl 129 (845)
.++++|++.+ .++.|.++|+.+. +.++++. .....-..+..+|+| .++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7788877654 5789999999765 6667773 111234567888999 66665544 78999999
Q ss_pred CCCceEEEEcCCCC---CeEEEEEecCCCEEEEEe-------------------CCCcEEEeeeeccCCceeEEEECCCC
Q psy467 130 RRKGCIYTYRGHSK---SINSIRFSPDGQWIASGG-------------------EDGVVRIGASFHLTNTSIHVVDLSLV 187 (845)
Q Consensus 130 ~t~~~l~~~~~h~~---~V~sLafSPdg~~Lasgs-------------------~DG~I~I~~~~~~~~~~I~vWDl~tg 187 (845)
.+++.+.++..... --..+.|+|+++.+++.. .+..|.+ ||+.++
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v-------------~D~~~~ 238 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHF-------------WDLRKR 238 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEE-------------EETTTT
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEE-------------EECCCC
Confidence 99999998863322 234578899999888874 2456666 999876
Q ss_pred ccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeE--EEcCCCCc
Q psy467 188 HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSA--IFQPHRSL 265 (845)
Q Consensus 188 ~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l--~fspdg~~ 265 (845)
+. +..+...... .. - ..+ +++|+++
T Consensus 239 k~--------------------~~tI~vg~~g--~~---P---------------------------~~i~f~~~Pdg~- 265 (462)
T 2ece_A 239 KR--------------------IHSLTLGEEN--RM---A---------------------------LELRPLHDPTKL- 265 (462)
T ss_dssp EE--------------------EEEEESCTTE--EE---E---------------------------EEEEECSSTTCC-
T ss_pred cE--------------------eeEEecCCCC--Cc---c---------------------------ceeEeeECCCCC-
Confidence 65 4443322110 00 0 122 2255554
Q ss_pred CCCCcccccccCceeEEEcCCCCcccceEEEEEe------CCCeEEEEECCCCe--EEEEe--cCC--------------
Q psy467 266 NRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS------ADRTVNFWDLEKFS--LVSTT--EKN-------------- 321 (845)
Q Consensus 266 ~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs------~DG~I~IWDl~s~~--~l~tl--~gh-------------- 321 (845)
++.+++ .+++|.+|..+.++ ..+.+ ...
T Consensus 266 ----------------------------~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~ 317 (462)
T 2ece_A 266 ----------------------------MGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFK 317 (462)
T ss_dssp ----------------------------EEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGT
T ss_pred ----------------------------EEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccc
Confidence 444443 56688777665443 12221 110
Q ss_pred --CCCEEEEEEeCCCCEEEEEeCCC--EEEEEecC---CceEEEecCCC--------------CCeEEEEEc-CCceEEE
Q psy467 322 --SSTIRRLTFSEGGECLLGGDTEG--LKVYGWEP---ARQYDAQPMGW--------------GKVQDLAVT-GTQLWFR 379 (845)
Q Consensus 322 --~~~VtslafSpdG~~Lasgs~DG--I~IWDl~t---gk~l~tl~~h~--------------~~VtsVafS-dg~lLaa 379 (845)
......+.+|+||++|.++.... |.+||+.. .+.+..+.... +..+.++++ ||++|.+
T Consensus 318 ~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyV 397 (462)
T 2ece_A 318 AVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYV 397 (462)
T ss_dssp EECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEE
T ss_pred cCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEE
Confidence 23578899999999999998766 99999863 34555554321 246899999 9999988
Q ss_pred E---EEEEee
Q psy467 380 R---VGTWSH 386 (845)
Q Consensus 380 S---VsiW~~ 386 (845)
+ .+-|..
T Consensus 398 aNsl~~~wd~ 407 (462)
T 2ece_A 398 TNSLYSTWDN 407 (462)
T ss_dssp ECCCCHHHHH
T ss_pred EcCCcccccc
Confidence 8 456643
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.79 E-value=1.7e-06 Score=97.80 Aligned_cols=142 Identities=12% Similarity=0.107 Sum_probs=102.1
Q ss_pred cCCCCEEEE-EeCCCeEEEEECCCC----eeEEEec------C-CCCCeEEEEEcCCCCEEEEEECC------CcEEEEE
Q psy467 25 KKSGQVLAT-GGDDKKVNLWALGKS----NCIMSLS------G-HSTPVESVQFGNGEETLSAGCQS------GSIKIWN 86 (845)
Q Consensus 25 p~dg~~LaT-gs~DG~I~IWdl~t~----~~i~~l~------~-h~~~V~sLafSpdg~~LaSgs~D------GtV~VWD 86 (845)
+ ++++|++ +..+++|.++|+.+. +..+++. . ....-..+..+|+| .++++..+ |.|.+.|
T Consensus 93 ~-~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 I-ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp C-CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred c-cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 5 5666665 556789999998755 6666663 1 11245567788999 66665544 7899999
Q ss_pred CCCCcEEEEEcCCCCC---eEEEEEccCCCEEEEEE-------------------CCCeEEEEECCCCceEEEEcCCC--
Q psy467 87 LAVPTVQRTLNGHKSS---ITSVDFHPYGDYLCSGS-------------------LDSFIKLWDLRRKGCIYTYRGHS-- 142 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~---V~~lafspdg~~Lasgs-------------------~DG~I~IWDl~t~~~l~~~~~h~-- 142 (845)
.++++.+.++.....+ -..+.|+|+++.+++.. .+..|.+||+.+++.+.++....
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 9999999998633222 33578899999888875 36899999999988888876531
Q ss_pred CCeEEEEE--ecCCCEEEEEeC------CCcEEE
Q psy467 143 KSINSIRF--SPDGQWIASGGE------DGVVRI 168 (845)
Q Consensus 143 ~~V~sLaf--SPdg~~Lasgs~------DG~I~I 168 (845)
.....+.| +|++++++++++ +++|.+
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v 284 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWL 284 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEE
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEE
Confidence 24556666 999999887764 456666
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.78 E-value=9.8e-06 Score=84.70 Aligned_cols=151 Identities=9% Similarity=-0.035 Sum_probs=100.2
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~v~~ 95 (845)
.+.+++|+++++.++++-..++.|..++.........+.........+++++++..|+.+. ..+.|.+++++.......
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 4678999984455555555678999999876554443433335789999999766665554 467899999875433333
Q ss_pred EcCCCCCeEEEEEccCCCEEEEEEC---CCeEEEEECCCCceEEEE-cCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy467 96 LNGHKSSITSVDFHPYGDYLCSGSL---DSFIKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGG-EDGVVRI 168 (845)
Q Consensus 96 l~~h~~~V~~lafspdg~~Lasgs~---DG~I~IWDl~t~~~l~~~-~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I 168 (845)
..........++++|++..|+.+.. .+.|..+++... ....+ ...-.....+++++++..|+.+. ..+.|..
T Consensus 117 ~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~ 193 (267)
T 1npe_A 117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC 193 (267)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence 3322345789999997777666654 368888888643 22222 22334678999999877665554 4567777
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.76 E-value=4.9e-07 Score=105.34 Aligned_cols=291 Identities=11% Similarity=0.111 Sum_probs=178.3
Q ss_pred EEEEEeCCCeEEEEECCCCeeEEEecC---------------------------------CC------CCeEEEEEcC--
Q psy467 30 VLATGGDDKKVNLWALGKSNCIMSLSG---------------------------------HS------TPVESVQFGN-- 68 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~~l~~---------------------------------h~------~~V~sLafSp-- 68 (845)
.+.+|+..|.++|+-+.+++.++.+.- +. +.......|.
T Consensus 17 ~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~ 96 (595)
T 1fwx_A 17 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE 96 (595)
T ss_dssp EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEET
T ss_pred EEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCC
Confidence 356788899999999998888777631 01 1122344444
Q ss_pred ---CCCEEEEEEC-CCcEEEEECCCCcEEEEEcC-CCCCeEEEEE-c-cCCCEEEEEE------------------CCCe
Q psy467 69 ---GEETLSAGCQ-SGSIKIWNLAVPTVQRTLNG-HKSSITSVDF-H-PYGDYLCSGS------------------LDSF 123 (845)
Q Consensus 69 ---dg~~LaSgs~-DGtV~VWDl~tg~~v~~l~~-h~~~V~~laf-s-pdg~~Lasgs------------------~DG~ 123 (845)
||++|+.... ++.|.+.|+++.++...+.- .......+++ + |+++++++++ .++.
T Consensus 97 g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 97 GKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 7888887766 45699999999998885432 2345788888 5 9999998885 2457
Q ss_pred EEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEe--eeeccCCceeEEEECCCCccCCCCCCCCCcce
Q psy467 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG--ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSV 201 (845)
Q Consensus 124 I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~--~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~sv 201 (845)
+.++|..+.+...++.-.. ....++++|||+++++.+.+..--.+ ..-......+.+.|.....
T Consensus 177 vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~------------- 242 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE------------- 242 (595)
T ss_dssp EEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH-------------
T ss_pred EEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecccee-------------
Confidence 9999999999888876433 46778999999999988866411000 0000000112225543221
Q ss_pred eecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeE
Q psy467 202 PFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSL 281 (845)
Q Consensus 202 s~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~sl 281 (845)
.+.++|+.... .. +.|.+...... . ..+. .++......++
T Consensus 243 ~~v~~Gk~~~i-----~~-----V~VID~~~~~~--------~----------~~~~------------~Ipvg~~PhGv 282 (595)
T 1fwx_A 243 KAIAAGDYQEL-----NG-----VKVVDGRKEAS--------S----------LFTR------------YIPIANNPHGC 282 (595)
T ss_dssp HHHHHTCSEEE-----TT-----EEEEECSGGGC--------C----------SSEE------------EEEEESSCCCE
T ss_pred EeccCCCeeEE-----Cc-----EEEEeCcccCC--------c----------eeEE------------EEecCCCceEE
Confidence 12233332221 11 11211110000 0 0001 11222344577
Q ss_pred EEcCCCCcccceEEEEEeCCCeEEEEECCCCe------------EEEEecCCCCCEEEEEEeCCCCEEEE-EeCCC-EEE
Q psy467 282 SILPQSPMLCFILTTSSSADRTVNFWDLEKFS------------LVSTTEKNSSTIRRLTFSEGGECLLG-GDTEG-LKV 347 (845)
Q Consensus 282 afSPdg~~~~~~lLatgs~DG~I~IWDl~s~~------------~l~tl~gh~~~VtslafSpdG~~Las-gs~DG-I~I 347 (845)
.++|||+. +++++..+.+|.++|+.+.+ .+..+.. ......++|+++| ++++ ...++ |.+
T Consensus 283 ~~sPDGk~----v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG-~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 283 NMAPDKKH----LCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRG-NAYTSLFLDSQVVK 356 (595)
T ss_dssp EECTTSSE----EEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTS-EEEEEETTTTEEEE
T ss_pred EEcCCCCE----EEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcceEEECCCC-eEEEEEecCCcEEE
Confidence 88888883 56666678999999998653 3444442 3468999999999 5554 44566 999
Q ss_pred EEecC----------CceEEEecCCCCCe-E----EEEEc-CCceEEEE
Q psy467 348 YGWEP----------ARQYDAQPMGWGKV-Q----DLAVT-GTQLWFRR 380 (845)
Q Consensus 348 WDl~t----------gk~l~tl~~h~~~V-t----sVafS-dg~lLaaS 380 (845)
||+++ .+.+..+..|..+- . ++.++ ||++|.++
T Consensus 357 wdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 357 WNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp EEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred EEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 99987 56777887775432 1 12335 89988766
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.76 E-value=1.4e-07 Score=109.97 Aligned_cols=229 Identities=12% Similarity=0.074 Sum_probs=153.5
Q ss_pred CCCEEEEEeC-CCeEEEEECCCCeeEEEecC-CCCCeEEEEE-c-CCCCEEEEEE------------------CCCcEEE
Q psy467 27 SGQVLATGGD-DKKVNLWALGKSNCIMSLSG-HSTPVESVQF-G-NGEETLSAGC------------------QSGSIKI 84 (845)
Q Consensus 27 dg~~LaTgs~-DG~I~IWdl~t~~~i~~l~~-h~~~V~sLaf-S-pdg~~LaSgs------------------~DGtV~V 84 (845)
+|+++++... ++.|.+.|+.+.++...+.- .......+++ + |++.++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 5667766654 56799999999998885532 2356889998 5 9999998885 2467999
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC--------------------------------------eEEE
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS--------------------------------------FIKL 126 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG--------------------------------------~I~I 126 (845)
+|.++.+...++.... .-..++++|+|+++++.+.+. .|.+
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 9999999988887433 456788999999999888553 3667
Q ss_pred EECCC--Cce-EEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCccee
Q psy467 127 WDLRR--KGC-IYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVP 202 (845)
Q Consensus 127 WDl~t--~~~-l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs 202 (845)
.|..+ ++. +..+.. .....++.++|||+++++++ .+.+|.+ +|+.+.+....- .
T Consensus 259 ID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsV-------------id~~~~~~~~~~--------~ 316 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTV-------------LDVTRFDAVFYE--------N 316 (595)
T ss_dssp EECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEE-------------EEGGGHHHHHHS--------C
T ss_pred EeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEE-------------EECccccccccc--------c
Confidence 77766 444 444432 23567899999999877665 5678888 998854320000 0
Q ss_pred ecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEE
Q psy467 203 FSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLS 282 (845)
Q Consensus 203 ~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~sla 282 (845)
+.+........ + .......++
T Consensus 317 l~~~~~v~~~v-----------------------------------------------~------------vG~gP~h~a 337 (595)
T 1fwx_A 317 ADPRSAVVAEP-----------------------------------------------E------------LGLGPLHTA 337 (595)
T ss_dssp CCGGGGEEECC-----------------------------------------------B------------CCSCEEEEE
T ss_pred cCcccceEEEc-----------------------------------------------C------------CCCCcceEE
Confidence 00000001111 1 112334556
Q ss_pred EcCCCCcccceEEEEEeCCCeEEEEECCC----------CeEEEEecCCCCCE-----EEEEEeCCCCEEEEEeC
Q psy467 283 ILPQSPMLCFILTTSSSADRTVNFWDLEK----------FSLVSTTEKNSSTI-----RRLTFSEGGECLLGGDT 342 (845)
Q Consensus 283 fSPdg~~~~~~lLatgs~DG~I~IWDl~s----------~~~l~tl~gh~~~V-----tslafSpdG~~Lasgs~ 342 (845)
|+|+|. ..++..-|+.|.+||+.+ .+.+.++..|-.+- ..+.++|||++|+++..
T Consensus 338 F~~dG~-----aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 338 FDGRGN-----AYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp ECTTSE-----EEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred ECCCCe-----EEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 666663 778888999999999977 56777887664322 12245799999999865
No 236
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.76 E-value=1.4e-05 Score=83.57 Aligned_cols=245 Identities=9% Similarity=-0.021 Sum_probs=147.0
Q ss_pred CEEEEEeCCCeEEEEECCCCee-----EEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcEEEEEcCCCCC
Q psy467 29 QVLATGGDDKKVNLWALGKSNC-----IMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTVQRTLNGHKSS 102 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~-----i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~v~~l~~h~~~ 102 (845)
.+|+.+.. +.|+.+++..... ...+......+..++|++++..|+.+. ..+.|..++.........+......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 45555553 4788888765432 111221224578999999776666554 4689999999866544444433356
Q ss_pred eEEEEEccCCCEEEEEE-CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC---CCcEEEeeeeccCCce
Q psy467 103 ITSVDFHPYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE---DGVVRIGASFHLTNTS 178 (845)
Q Consensus 103 V~~lafspdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~---DG~I~I~~~~~~~~~~ 178 (845)
...+++++++..|+.+. ..+.|.++++..................++++|++..|+.+.. .+.|..
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~---------- 150 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIET---------- 150 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEE----------
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEE----------
Confidence 78999999776666554 5678999998643322222222246789999997666655543 245555
Q ss_pred eEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEE
Q psy467 179 IHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAI 258 (845)
Q Consensus 179 I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 258 (845)
+++..... ..+... . +
T Consensus 151 ---~~~dg~~~---------------------~~~~~~--~-------~------------------------------- 166 (267)
T 1npe_A 151 ---SHMDGTNR---------------------RILAQD--N-------L------------------------------- 166 (267)
T ss_dssp ---EETTSCCC---------------------EEEECT--T-------C-------------------------------
T ss_pred ---EecCCCCc---------------------EEEEEC--C-------C-------------------------------
Confidence 55532111 111000 0 0
Q ss_pred EcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEE
Q psy467 259 FQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL 338 (845)
Q Consensus 259 fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~La 338 (845)
.....+++++++.. ++++....+.|.++|.........+.+ ......++.. +..|+
T Consensus 167 -----------------~~P~gia~d~~~~~----lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~ly 222 (267)
T 1npe_A 167 -----------------GLPNGLTFDAFSSQ----LCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLY 222 (267)
T ss_dssp -----------------SCEEEEEEETTTTE----EEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEE
T ss_pred -----------------CCCcEEEEcCCCCE----EEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEE
Confidence 11233444444331 556666678999999986544444433 2344667654 55666
Q ss_pred EEeCC-C-EEEEEecCCceEEEecCCC-CCeEEEEEc
Q psy467 339 GGDTE-G-LKVYGWEPARQYDAQPMGW-GKVQDLAVT 372 (845)
Q Consensus 339 sgs~D-G-I~IWDl~tgk~l~tl~~h~-~~VtsVafS 372 (845)
.+..+ + |.++|..+++.+.++.... ....++++.
T Consensus 223 va~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~ 259 (267)
T 1npe_A 223 YTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIA 259 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEE
T ss_pred EEECCCCeEEEEeCCCCCceEEEccccccccceeeec
Confidence 66654 4 9999999999888886543 347778777
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.75 E-value=9e-07 Score=94.49 Aligned_cols=217 Identities=12% Similarity=0.043 Sum_probs=147.9
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVD 107 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~la 107 (845)
+..+.+++.++.|..+|.. ++.......+...+.++...+++. |..++.++.|..+|.. ++....+......+.++.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 3567778888999999988 777777665666677777777776 5567778999999999 887777765566677788
Q ss_pred EccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCC
Q psy467 108 FHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLV 187 (845)
Q Consensus 108 fspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg 187 (845)
..+++..++ ++ +.|..+| .+++.+..+......+.++...++|. +.+++.++.+.. +|. ++
T Consensus 184 ~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~-------------~~~-~g 244 (330)
T 3hxj_A 184 IGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYA-------------INP-DG 244 (330)
T ss_dssp ECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEE-------------ECT-TS
T ss_pred EcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEE-------------ECC-CC
Confidence 877776444 44 7899999 77888777776666788888888776 455666777777 653 33
Q ss_pred ccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCC
Q psy467 188 HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNR 267 (845)
Q Consensus 188 ~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~ 267 (845)
.. +..+...... + ..+.+..++
T Consensus 245 ~~--------------------~~~~~~~~~~-------~---------------------------~~~~~~~~g---- 266 (330)
T 3hxj_A 245 TE--------------------KWRFKTGKRI-------E---------------------------SSPVIGNTD---- 266 (330)
T ss_dssp CE--------------------EEEEECSSCC-------C---------------------------SCCEECTTS----
T ss_pred CE--------------------eEEeeCCCCc-------c---------------------------ccceEcCCC----
Confidence 33 2221111110 0 112222222
Q ss_pred CCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EE
Q psy467 268 SGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LK 346 (845)
Q Consensus 268 ~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~ 346 (845)
.|..++.+|.|..+|. +++.+..+......+.++..+++|. |..++.+| ++
T Consensus 267 --------------------------~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~ 318 (330)
T 3hxj_A 267 --------------------------TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFY 318 (330)
T ss_dssp --------------------------CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEE
T ss_pred --------------------------eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEE
Confidence 3667778889999996 6777777665556678888888886 45577888 77
Q ss_pred EEEecC
Q psy467 347 VYGWEP 352 (845)
Q Consensus 347 IWDl~t 352 (845)
+...+.
T Consensus 319 ~~~~~~ 324 (330)
T 3hxj_A 319 ALFNLE 324 (330)
T ss_dssp EEEC--
T ss_pred EEeccc
Confidence 766543
No 238
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.73 E-value=1.2e-06 Score=105.48 Aligned_cols=102 Identities=13% Similarity=0.077 Sum_probs=75.2
Q ss_pred CCeEEEEECCCCeeEEEecCC--C-----------------------------CCeEEEEEcCCCCEEEEEECCCc----
Q psy467 37 DKKVNLWALGKSNCIMSLSGH--S-----------------------------TPVESVQFGNGEETLSAGCQSGS---- 81 (845)
Q Consensus 37 DG~I~IWdl~t~~~i~~l~~h--~-----------------------------~~V~sLafSpdg~~LaSgs~DGt---- 81 (845)
+|.|..||..+|+.+.++... . ..-..+++++++..|+.++.++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 689999999999998877521 0 01125788898899998877763
Q ss_pred ---------------EEEEECCCCcEEEEEcC--CC-------CCeEEEEEccCCC---EEEEEECCCeEEEEECCCCce
Q psy467 82 ---------------IKIWNLAVPTVQRTLNG--HK-------SSITSVDFHPYGD---YLCSGSLDSFIKLWDLRRKGC 134 (845)
Q Consensus 82 ---------------V~VWDl~tg~~v~~l~~--h~-------~~V~~lafspdg~---~Lasgs~DG~I~IWDl~t~~~ 134 (845)
|..||.++|+.+..++. |. .+........+|+ .++.++.+|.++++|..+++.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 99999999999988764 21 1222223333564 788999999999999999998
Q ss_pred EEEE
Q psy467 135 IYTY 138 (845)
Q Consensus 135 l~~~ 138 (845)
+...
T Consensus 342 l~~~ 345 (689)
T 1yiq_A 342 LSAK 345 (689)
T ss_dssp EEEE
T ss_pred eccc
Confidence 8544
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.65 E-value=5.3e-06 Score=91.02 Aligned_cols=257 Identities=11% Similarity=0.045 Sum_probs=145.7
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCe---
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI--- 103 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V--- 103 (845)
++..+++++.++.|..+|..+++.+................ +..+++++.++.|..+|..+|+.+..........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~ 179 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLR 179 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----C
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeec
Confidence 34678888899999999999999887776443222222222 4578888889999999999999888776432211
Q ss_pred --EEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCC----eE---EEEEec--CCCEEEEEeCCCcEEEeeee
Q psy467 104 --TSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS----IN---SIRFSP--DGQWIASGGEDGVVRIGASF 172 (845)
Q Consensus 104 --~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~----V~---sLafSP--dg~~Lasgs~DG~I~I~~~~ 172 (845)
...... +..+++++.++.|..+|..+++.+......... +. .+...| .+..+++++.++.+..
T Consensus 180 ~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~---- 253 (376)
T 3q7m_A 180 GESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTA---- 253 (376)
T ss_dssp CCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEE----
T ss_pred CCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEE----
Confidence 112222 457888888999999999999988777532110 00 011111 2466777778888888
Q ss_pred ccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCC
Q psy467 173 HLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANP 252 (845)
Q Consensus 173 ~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~ 252 (845)
+|..+++.+..........+... +..+.... .... +
T Consensus 254 ---------~d~~tG~~~w~~~~~~~~~~~~~--~~~l~~~~-~~g~-------l------------------------- 289 (376)
T 3q7m_A 254 ---------LDLRSGQIMWKRELGSVNDFIVD--GNRIYLVD-QNDR-------V------------------------- 289 (376)
T ss_dssp ---------EETTTCCEEEEECCCCEEEEEEE--TTEEEEEE-TTCC-------E-------------------------
T ss_pred ---------EECCCCcEEeeccCCCCCCceEE--CCEEEEEc-CCCe-------E-------------------------
Confidence 88887776322211111111111 11111111 0111 1
Q ss_pred CceeEEEcCC-CCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEE-EEE
Q psy467 253 CDYSAIFQPH-RSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRR-LTF 330 (845)
Q Consensus 253 ~~~~l~fspd-g~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~~~Vts-laf 330 (845)
.++++. +...-..... ........... +. .|++++.+|.++++|..+++.+.........+.+ ...
T Consensus 290 ----~~~d~~tG~~~w~~~~~-~~~~~~~~~~~--~~-----~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~ 357 (376)
T 3q7m_A 290 ----MALTIDGGVTLWTQSDL-LHRLLTSPVLY--NG-----NLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA 357 (376)
T ss_dssp ----EEEETTTCCEEEEECTT-TTSCCCCCEEE--TT-----EEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE
T ss_pred ----EEEECCCCcEEEeeccc-CCCcccCCEEE--CC-----EEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE
Confidence 112211 1100000000 00111122222 22 6888889999999999999998877753333322 222
Q ss_pred eCCCCEEEEEeCCC-EEEEE
Q psy467 331 SEGGECLLGGDTEG-LKVYG 349 (845)
Q Consensus 331 SpdG~~Lasgs~DG-I~IWD 349 (845)
.+..|++++.+| |..|+
T Consensus 358 --~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 358 --ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp --ETTEEEEEBTTSCEEEEE
T ss_pred --ECCEEEEEeCCCEEEEEe
Confidence 245778888888 88876
No 240
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.63 E-value=6.9e-06 Score=98.40 Aligned_cols=150 Identities=13% Similarity=0.137 Sum_probs=103.1
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCC-CeEEEEEcC--CCCEEEEEEC------CCcEEEEECCCCcEEEEEcC
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHST-PVESVQFGN--GEETLSAGCQ------SGSIKIWNLAVPTVQRTLNG 98 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~-~V~sLafSp--dg~~LaSgs~------DGtV~VWDl~tg~~v~~l~~ 98 (845)
+..+++++.|+.|..+|..+|+.+.++..... ....+..+| .+..+++++. +|.|..+|..+|+.+..+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 45688888899999999999999887764211 000011111 1345555543 58999999999999988752
Q ss_pred CC---C----------------------------CeEEEEEccCCCEEEEEECCC-------------------eEEEEE
Q psy467 99 HK---S----------------------------SITSVDFHPYGDYLCSGSLDS-------------------FIKLWD 128 (845)
Q Consensus 99 h~---~----------------------------~V~~lafspdg~~Lasgs~DG-------------------~I~IWD 128 (845)
.. . ....+++.+++..++.++.++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 11 0 012467888888888887766 499999
Q ss_pred CCCCceEEEEcCC--C-------CCeEEEEEecCCC---EEEEEeCCCcEEEeeeeccCCceeEEEECCCCccC
Q psy467 129 LRRKGCIYTYRGH--S-------KSINSIRFSPDGQ---WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL 190 (845)
Q Consensus 129 l~t~~~l~~~~~h--~-------~~V~sLafSPdg~---~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l 190 (845)
..+++.+..+... . .+.....+..+|+ .++.++.+|.+++ +|..+|+.+
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~-------------lD~~tG~~l 337 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYV-------------LDRTNGKLI 337 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEE-------------EETTTCCEE
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEE-------------EECCCCCEe
Confidence 9999999888642 1 2233333334665 6888889999999 999999873
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.62 E-value=1.1e-05 Score=85.49 Aligned_cols=208 Identities=9% Similarity=0.063 Sum_probs=136.3
Q ss_pred eeEEEecCCCC--CeEEEEEcCCCCEEEEEEC--CCcEEEEECCCCcEEEEEcCCCC-CeEEEEEccCCCEEEEEE-CCC
Q psy467 49 NCIMSLSGHST--PVESVQFGNGEETLSAGCQ--SGSIKIWNLAVPTVQRTLNGHKS-SITSVDFHPYGDYLCSGS-LDS 122 (845)
Q Consensus 49 ~~i~~l~~h~~--~V~sLafSpdg~~LaSgs~--DGtV~VWDl~tg~~v~~l~~h~~-~V~~lafspdg~~Lasgs-~DG 122 (845)
+.+.++. |.. ....++|++++...++.+. ++.|.++|+.+++.+..+..... ....+++. ++.|+.+. .++
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC
Confidence 4455554 443 4689999998654444443 58999999999999988753222 22345554 55565554 678
Q ss_pred eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCccee
Q psy467 123 FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVP 202 (845)
Q Consensus 123 ~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs 202 (845)
.+.++|..+.+.+.++..... ....+++||+.++++..++.+.+ +|..+.+.
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~v-------------iD~~t~~v------------- 138 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYE-------------IDPHTFKL------------- 138 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEE-------------ECTTTCCE-------------
T ss_pred EEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEE-------------EECCCCcE-------------
Confidence 999999999999988863312 22446667887777777788888 99888776
Q ss_pred ecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEE
Q psy467 203 FSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLS 282 (845)
Q Consensus 203 ~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~sla 282 (845)
+..+.-.... .. + .....+.|. ++.
T Consensus 139 -------~~~I~Vg~~~---~p--~------------------------~~~nele~~-dg~------------------ 163 (266)
T 2iwa_A 139 -------IKKHNVKYNG---HR--V------------------------IRLNELEYI-NGE------------------ 163 (266)
T ss_dssp -------EEEEECEETT---EE--C------------------------CCEEEEEEE-TTE------------------
T ss_pred -------EEEEEECCCC---cc--c------------------------ccceeEEEE-CCE------------------
Confidence 3333211110 00 0 000233343 333
Q ss_pred EcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC-------------CCCEEEEEEeCCCCEEEEEeCC-C-EEE
Q psy467 283 ILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN-------------SSTIRRLTFSEGGECLLGGDTE-G-LKV 347 (845)
Q Consensus 283 fSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh-------------~~~VtslafSpdG~~Lasgs~D-G-I~I 347 (845)
+++....++.|.+.|..+++.+.++.-. ....+.++|+|+++.+++++.. . +.+
T Consensus 164 -----------lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~ 232 (266)
T 2iwa_A 164 -----------VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFE 232 (266)
T ss_dssp -----------EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEE
T ss_pred -----------EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEE
Confidence 6666666889999999999998888631 1356899999998877766654 4 777
Q ss_pred EEecCC
Q psy467 348 YGWEPA 353 (845)
Q Consensus 348 WDl~tg 353 (845)
.++...
T Consensus 233 i~l~~~ 238 (266)
T 2iwa_A 233 IKLHLV 238 (266)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 777653
No 242
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.60 E-value=4.9e-07 Score=100.52 Aligned_cols=259 Identities=11% Similarity=-0.023 Sum_probs=155.4
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEe----------CCCeEEEEECCCCeeEEEecCC-------CCCeEEEEEcCCC
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGG----------DDKKVNLWALGKSNCIMSLSGH-------STPVESVQFGNGE 70 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs----------~DG~I~IWdl~t~~~i~~l~~h-------~~~V~sLafSpdg 70 (845)
+.++..-..+ .++++| ++++++++. .++.|.+||..+++.+.++.-. ......++++|||
T Consensus 59 ~~~i~vG~~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDG 135 (368)
T 1mda_H 59 LGHSLGAFLS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASS 135 (368)
T ss_dssp EEEEEECTTC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTS
T ss_pred EEEEeCCCCC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCC
Confidence 3455444445 799999 888888775 3678999999999999988633 1345689999999
Q ss_pred CEEEEEEC--CCcEEE--EECCCCcEEEEEcCCCCCeEEEEEccCC-CEEEEEECCCeEEEEECCC-----CceEEE---
Q psy467 71 ETLSAGCQ--SGSIKI--WNLAVPTVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRR-----KGCIYT--- 137 (845)
Q Consensus 71 ~~LaSgs~--DGtV~V--WDl~tg~~v~~l~~h~~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t-----~~~l~~--- 137 (845)
++++++.. +..|.+ +|..+ +..+... +. ..+.|++ ..+++.+.||.+.+.|+.+ ++....
T Consensus 136 k~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~ 208 (368)
T 1mda_H 136 ACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTG 208 (368)
T ss_dssp SCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCT
T ss_pred CEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeee
Confidence 99998875 467888 99887 4555421 11 2234544 3556667788888888876 332211
Q ss_pred -EcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCc--cCCCC------------CCCCCccee
Q psy467 138 -YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVH--PLGTP------------PPQYTSSVP 202 (845)
Q Consensus 138 -~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~--~l~~~------------~~~~i~svs 202 (845)
+.....+. . ++++..++..+. +.+.+ .|..+.. .+... .+.....+.
T Consensus 209 ~i~vg~~P~---~-~~~~~~~~~vs~-~~V~v-------------iD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 209 AQNCSSQAA---Q-ANYPGMLVWAVA-SSILQ-------------GDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA 270 (368)
T ss_dssp TSCBCSCCE---E-ETTTTEEEECBS-SCCEE-------------EECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred eeeCCCCcc---c-cccCCEEEEEcC-CEEEE-------------EECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence 11112232 3 666666665556 77877 7775432 11111 012223377
Q ss_pred ecCCCCeEEEEec-C-C-CCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCce
Q psy467 203 FSHNTSLRKSFTK-G-R-PGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRT 279 (845)
Q Consensus 203 ~spdg~~l~~~~~-h-~-~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~ 279 (845)
++++++.+..... . . ....... + ..++.... +....+.......
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~--~-----------------------------~ViD~~t~--~vv~~i~vg~~p~ 317 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAEN--T-----------------------------SSVTASVG--QTSGPISNGHDSD 317 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEE--E-----------------------------EEEESSSC--CEEECCEEEEEEC
T ss_pred EcCCCCEEEEEeccccCcccccCCC--E-----------------------------EEEECCCC--eEEEEEECCCCcc
Confidence 8999887665322 1 1 0000000 1 12222111 0011122233467
Q ss_pred eEEEcCCCCcccceEEEEEe-CCCeEEEEECCCCeEEEEecCCCCCEEEEEEeC
Q psy467 280 SLSILPQSPMLCFILTTSSS-ADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE 332 (845)
Q Consensus 280 slafSPdg~~~~~~lLatgs-~DG~I~IWDl~s~~~l~tl~gh~~~VtslafSp 332 (845)
.++|+|||+. ++++.. .++.|.++|+.+++.+.++..... ...+++.+
T Consensus 318 gi~~s~Dg~~----l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 318 AIIAAQDGAS----DNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp EEEECCSSSC----EEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred eEEECCCCCE----EEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence 8888888874 566666 599999999999999999986433 34555543
No 243
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.54 E-value=0.00015 Score=88.28 Aligned_cols=312 Identities=11% Similarity=0.085 Sum_probs=180.4
Q ss_pred EEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCC-CCC-eEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE
Q psy467 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGH-STP-VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 18 V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h-~~~-V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~ 95 (845)
|.++...+ +|.+.+ ++. +.|..|+..+++.......+ ... |.++...+++.+. .++.++.|..|+..+++....
T Consensus 133 i~~i~~d~-~g~lwi-~t~-~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lw-igt~~~Gl~~~~~~~~~~~~~ 208 (795)
T 4a2l_A 133 VNGIEEIS-PEQLLI-STP-EGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIY-IGTSTDGLYTYSITQKTFEKV 208 (795)
T ss_dssp CCEEEEEE-TTEEEE-EET-TEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEE-EEESSSCEEEEETTTCCEEEC
T ss_pred EEEEEECC-CCCEEE-EEC-CceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEE-EEECCCCEEEEeCCCCeEEEe
Confidence 88888877 666554 444 45889998766543211111 123 8888888877644 466665699999887765432
Q ss_pred E-cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC-------CCCCeEEEEEecCCCEEEEEeCCCcEE
Q psy467 96 L-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-------HSKSINSIRFSPDGQWIASGGEDGVVR 167 (845)
Q Consensus 96 l-~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-------h~~~V~sLafSPdg~~Lasgs~DG~I~ 167 (845)
. ......|.++...+++. |..|+.++-|..||..+++....... ....|.++...++|.+.+ |+.+| +.
T Consensus 209 ~~~~~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G-l~ 285 (795)
T 4a2l_A 209 IPILGTKQIQAILQQSPTR-IWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFND-LN 285 (795)
T ss_dssp C----CCCEEEEEEEETTE-EEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESSC-EE
T ss_pred cCCCCCCeeEEEEEcCCCC-EEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCCh-hh
Confidence 1 12345688888887775 44555444488999877654432221 135689999998887554 44554 66
Q ss_pred EeeeeccCCceeEEEECCCCccC---------CCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccc
Q psy467 168 IGASFHLTNTSIHVVDLSLVHPL---------GTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESED 238 (845)
Q Consensus 168 I~~~~~~~~~~I~vWDl~tg~~l---------~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~ 238 (845)
+ ||..++... ..+....+.++...++|.+-... ...+ +..+.....
T Consensus 286 ~-------------~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt--~~~G-------l~~~~~~~~--- 340 (795)
T 4a2l_A 286 I-------------YHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGT--YFGG-------LNYYHPIRN--- 340 (795)
T ss_dssp E-------------EETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEE--SSSC-------EEEECGGGG---
T ss_pred e-------------EcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEE--CCCC-------eEEeCCCcc---
Confidence 6 665544321 11123345555555555532211 1111 211110000
Q ss_pred cccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEe
Q psy467 239 QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT 318 (845)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl 318 (845)
....+..... ........|.+++..++|. |-.|+.++-|..||..++......
T Consensus 341 ----------------~~~~~~~~~~-----~~~l~~~~V~~i~~d~~g~------lWiGt~~~Gl~~~~~~~~~~~~~~ 393 (795)
T 4a2l_A 341 ----------------RFKNIRNIPY-----KNSLSDNVVSCIVEDKDKN------LWIGTNDGGLNLYNPITQRFTSYT 393 (795)
T ss_dssp ----------------SSEEECCCTT-----SSSCSCSSEEEEEECTTSC------EEEEESSSCEEEECTTTCCEEEEC
T ss_pred ----------------cceEEcCCCC-----CCCCCCCeeEEEEECCCCC------EEEEECCCCeEEEcCCCCcEEEEe
Confidence 0000111000 0001134577888888876 555777778999998876544332
Q ss_pred cC--------CCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceEEEec----CCCCCeEEEEEc-CCceEEEE---E
Q psy467 319 EK--------NSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQYDAQP----MGWGKVQDLAVT-GTQLWFRR---V 381 (845)
Q Consensus 319 ~g--------h~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l~tl~----~h~~~VtsVafS-dg~lLaaS---V 381 (845)
.. ....|.+++..++|+.|..|+.++ |.+||..+++...... .....|.++... +|.+.+++ +
T Consensus 394 ~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl 473 (795)
T 4a2l_A 394 LQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSAL 473 (795)
T ss_dssp CC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCE
T ss_pred cCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCce
Confidence 11 135799999999998566677755 9999988876443221 234579999988 78877766 5
Q ss_pred EEEeeCC
Q psy467 382 GTWSHQD 388 (845)
Q Consensus 382 siW~~d~ 388 (845)
..|..+.
T Consensus 474 ~~~~~~~ 480 (795)
T 4a2l_A 474 VRFNPEQ 480 (795)
T ss_dssp EEEETTT
T ss_pred eEEeCCC
Confidence 5555443
No 244
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.51 E-value=1.9e-05 Score=83.66 Aligned_cols=162 Identities=12% Similarity=0.041 Sum_probs=114.6
Q ss_pred eEEeccCCCc--EEEEEEecCCCCEEEEEeC--CCeEEEEECCCCeeEEEecCC-CCCeEEEEEcCCCCEEEEEE-CCCc
Q psy467 8 AEDFMAHGAS--VNCLALGKKSGQVLATGGD--DKKVNLWALGKSNCIMSLSGH-STPVESVQFGNGEETLSAGC-QSGS 81 (845)
Q Consensus 8 l~~L~gH~~~--V~~LafSp~dg~~LaTgs~--DG~I~IWdl~t~~~i~~l~~h-~~~V~sLafSpdg~~LaSgs-~DGt 81 (845)
++++ .|... ...++|++ ++.++++.+. ++.|.++|..+++.+..+.-. ......+++. ++.|..+. .++.
T Consensus 12 v~~~-p~~~~~f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 12 LNEF-PHDPYAFTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNI 87 (266)
T ss_dssp EEEE-ECCTTCCEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSE
T ss_pred EEEE-ECCCCCCcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCE
Confidence 3455 46643 68999998 6655555443 579999999999998887522 2233455555 45555554 5789
Q ss_pred EEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCC-----CCeEEEEEecCCCE
Q psy467 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS-----KSINSIRFSPDGQW 156 (845)
Q Consensus 82 V~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~-----~~V~sLafSPdg~~ 156 (845)
+.++|..+++.+.++...... ...+++||+.++++..++.|.++|..+.+.+..+.-.. ..++.+.|. +|..
T Consensus 88 v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~l 164 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEV 164 (266)
T ss_dssp EEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEE
Confidence 999999999999998633122 23456688877777778999999999988888776322 236788888 6755
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.+....++.|.+ .|..+++.
T Consensus 165 yvn~~~~~~V~v-------------ID~~tg~V 184 (266)
T 2iwa_A 165 WANIWQTDCIAR-------------ISAKDGTL 184 (266)
T ss_dssp EEEETTSSEEEE-------------EETTTCCE
T ss_pred EEecCCCCeEEE-------------EECCCCcE
Confidence 555545778888 99998887
No 245
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.50 E-value=3e-05 Score=91.08 Aligned_cols=147 Identities=10% Similarity=0.115 Sum_probs=97.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCC----CCeEE-EEEcCCCCEEEEEEC------CCcEEEEECCCCcEEEEE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHS----TPVES-VQFGNGEETLSAGCQ------SGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~----~~V~s-LafSpdg~~LaSgs~------DGtV~VWDl~tg~~v~~l 96 (845)
+..+++++.|+.|..+|..+|+.+.+..... ..+.+ ... .+..+++++. ++.|..+|..+|+.+.++
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 4577888889999999999999987765321 01111 111 1345666654 789999999999999887
Q ss_pred cCCCCC-------------------------------------e-EEEEEccCCCEEEEEECC----------------C
Q psy467 97 NGHKSS-------------------------------------I-TSVDFHPYGDYLCSGSLD----------------S 122 (845)
Q Consensus 97 ~~h~~~-------------------------------------V-~~lafspdg~~Lasgs~D----------------G 122 (845)
...... + ..+++.++...++.++.+ +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 532211 0 135666766677766532 3
Q ss_pred eEEEEECCCCceEEEEcCCCC---------CeEEEEEecCCC---EEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 123 FIKLWDLRRKGCIYTYRGHSK---------SINSIRFSPDGQ---WIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 123 ~I~IWDl~t~~~l~~~~~h~~---------~V~sLafSPdg~---~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.|..+|..+++.+..+..... ...-+....+|+ .++.++.+|.+++ +|..+++.
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~-------------lD~~tG~~ 338 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYT-------------LNRENGNL 338 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEE-------------EETTTCCE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEE-------------EECCCCCE
Confidence 699999999999988763211 111123334674 5677888888888 99988887
No 246
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.48 E-value=0.00041 Score=84.31 Aligned_cols=270 Identities=13% Similarity=0.149 Sum_probs=170.8
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC-------CCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG-------HSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~-------h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
..|.++...+ +|.+. .|+.+ -|.+|+..++........ ....|.++...++|. |..|+.++-|..|+..
T Consensus 263 ~~i~~i~~d~-~g~lW-igt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~ 338 (795)
T 4a2l_A 263 NYIRSLAMDS-QNRLW-IGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPI 338 (795)
T ss_dssp SBEEEEEECT-TSCEE-EEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGG
T ss_pred CeEEEEEEcC-CCCEE-EEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCC
Confidence 5699999987 66644 45555 488999877665443211 235799999998887 5567777889999876
Q ss_pred CCcEEEEEc------CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC--------CCCCeEEEEEecCC
Q psy467 89 VPTVQRTLN------GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG--------HSKSINSIRFSPDG 154 (845)
Q Consensus 89 tg~~v~~l~------~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~--------h~~~V~sLafSPdg 154 (845)
++....... .....|.++...++|+ |..|+.++-|..||..++........ ....|.++...++|
T Consensus 339 ~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g 417 (795)
T 4a2l_A 339 RNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKK 417 (795)
T ss_dssp GGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTT
T ss_pred cccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCC
Confidence 654322211 0234689998888876 55677777799999887654432211 23568999998888
Q ss_pred CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccc
Q psy467 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 155 ~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
+.|.+|+.++-+.. ||..+++. ..+...... .
T Consensus 418 ~~lWigt~~~Gl~~-------------~d~~~~~~---------------------~~~~~~~~~-------l------- 449 (795)
T 4a2l_A 418 SLVYIGTHAGGLSI-------------LHRNSGQV---------------------ENFNQRNSQ-------L------- 449 (795)
T ss_dssp TEEEEEETTTEEEE-------------EETTTCCE---------------------EEECTTTSC-------C-------
T ss_pred CEEEEEeCcCceeE-------------EeCCCCcE---------------------EEeecCCCC-------c-------
Confidence 85666777677888 88776543 111100000 0
Q ss_pred cccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeE
Q psy467 235 ESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSL 314 (845)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~ 314 (845)
....|.++...++|. +.+ |+. +-+.+||..+++.
T Consensus 450 ---------------------------------------~~~~v~~i~~d~~g~-----lwi-gt~-~Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 450 ---------------------------------------VNENVYAILPDGEGN-----LWL-GTL-SALVRFNPEQRSF 483 (795)
T ss_dssp ---------------------------------------SCSCEEEEEECSSSC-----EEE-EES-SCEEEEETTTTEE
T ss_pred ---------------------------------------CCCeeEEEEECCCCC-----EEE-Eec-CceeEEeCCCCeE
Confidence 001233333334443 443 344 4588999887755
Q ss_pred EEEecC------CCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEec-------CCCCCeEEEEEc-CCceEEEE
Q psy467 315 VSTTEK------NSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQP-------MGWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 315 l~tl~g------h~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~-------~h~~~VtsVafS-dg~lLaaS 380 (845)
...... ....|.++..+++|.+.+... +||..|+..+++. .+. .....|.++... +|.+.+++
T Consensus 484 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT 560 (795)
T 4a2l_A 484 TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGT 560 (795)
T ss_dssp EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEE
T ss_pred EEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEe
Confidence 432211 235799999999998666554 6799999988765 332 123578999988 88877666
Q ss_pred ---EEEEeeC
Q psy467 381 ---VGTWSHQ 387 (845)
Q Consensus 381 ---VsiW~~d 387 (845)
+..|..+
T Consensus 561 ~~Gl~~~d~~ 570 (795)
T 4a2l_A 561 REGFYCFNEK 570 (795)
T ss_dssp SSCEEEEETT
T ss_pred CCCceeECCC
Confidence 5555433
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.47 E-value=2.9e-05 Score=81.73 Aligned_cols=197 Identities=11% Similarity=0.144 Sum_probs=130.4
Q ss_pred eeEEEecCCCCC--eEEEEEcCCCCEEEEEECCC--cEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEE-CCCe
Q psy467 49 NCIMSLSGHSTP--VESVQFGNGEETLSAGCQSG--SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGS-LDSF 123 (845)
Q Consensus 49 ~~i~~l~~h~~~--V~sLafSpdg~~LaSgs~DG--tV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs-~DG~ 123 (845)
+.+.++. |... ...+.|+ ++.+..+.+.+| .|+++|+++++.+..+... .........++++.|+... .++.
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCE
Confidence 3455554 5443 5899998 666666776666 8999999999999888643 3343433344466665555 5789
Q ss_pred EEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceee
Q psy467 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPF 203 (845)
Q Consensus 124 I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~ 203 (845)
+.+||..+.+.+.++.... ....+++|++.|+.+..++.|.+ +|..+.+.
T Consensus 109 v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~-------------iDp~T~~v-------------- 158 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRF-------------LDPESLTP-------------- 158 (262)
T ss_dssp EEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEE-------------ECTTTCSE--------------
T ss_pred EEEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEE-------------EcCCCCeE--------------
Confidence 9999999999999987432 22334456777777666777888 99988777
Q ss_pred cCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEE
Q psy467 204 SHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSI 283 (845)
Q Consensus 204 spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slaf 283 (845)
+..+.-...+..... + ..+.|. ++.
T Consensus 159 ------~~~I~V~~~g~~~~~--l---------------------------NELe~~-~G~------------------- 183 (262)
T 3nol_A 159 ------VRTITVTAHGEELPE--L---------------------------NELEWV-DGE------------------- 183 (262)
T ss_dssp ------EEEEECEETTEECCC--E---------------------------EEEEEE-TTE-------------------
T ss_pred ------EEEEEeccCCccccc--c---------------------------ceeEEE-CCE-------------------
Confidence 443322111100000 0 123332 333
Q ss_pred cCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC------------CCCEEEEEEeCCCCEEEEEeCC
Q psy467 284 LPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN------------SSTIRRLTFSEGGECLLGGDTE 343 (845)
Q Consensus 284 SPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh------------~~~VtslafSpdG~~Lasgs~D 343 (845)
+.+..-.++.|.+.|..+++.+..+... ....+.++|+|+++.|++.+..
T Consensus 184 ----------lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 184 ----------IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp ----------EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred ----------EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 6666667889999999999998887642 1356899999998888877764
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.41 E-value=0.00011 Score=78.99 Aligned_cols=149 Identities=9% Similarity=-0.003 Sum_probs=97.6
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC--------------------CCCCeEEEEEcCCCCEEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG--------------------HSTPVESVQFGNGEETLSA 75 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~--------------------h~~~V~sLafSpdg~~LaS 75 (845)
....+++|++ ++++++++..++.|..|+..++... .+.. ....+..+++.+++..|+.
T Consensus 19 ~~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp SCCCCEECCT-TCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred CCceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 4567789998 7887888888999999998765433 2210 0135789999983334555
Q ss_pred EECCCcEEEEECCCCcEEEEEcC-----CCCCeEEEEEcc-CCCEEEEEEC-----------------CCeEEEEECCCC
Q psy467 76 GCQSGSIKIWNLAVPTVQRTLNG-----HKSSITSVDFHP-YGDYLCSGSL-----------------DSFIKLWDLRRK 132 (845)
Q Consensus 76 gs~DGtV~VWDl~tg~~v~~l~~-----h~~~V~~lafsp-dg~~Lasgs~-----------------DG~I~IWDl~t~ 132 (845)
+...+.|..+|..++.. ..+.. .......+++.+ +|+..++-.. ++.|..||..++
T Consensus 97 ~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp EETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred EECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 55556688888876532 22211 113467899999 8976665432 367889998766
Q ss_pred ceEEEEcCCCCCeEEEEEecCCCEEEEE-eCCCcEEE
Q psy467 133 GCIYTYRGHSKSINSIRFSPDGQWIASG-GEDGVVRI 168 (845)
Q Consensus 133 ~~l~~~~~h~~~V~sLafSPdg~~Lasg-s~DG~I~I 168 (845)
+...... .-.....++|++++++|+.+ ..++.|..
T Consensus 176 ~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~ 211 (322)
T 2fp8_A 176 ETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVK 211 (322)
T ss_dssp EEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEE
T ss_pred EEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEE
Confidence 5433222 12345679999999876655 44577887
No 249
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.41 E-value=6.5e-05 Score=88.46 Aligned_cols=150 Identities=14% Similarity=0.072 Sum_probs=98.2
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCCCC----CeE-EEEEcC---CCC-EEEEEEC------CCcEEEEECCCCcE
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHST----PVE-SVQFGN---GEE-TLSAGCQ------SGSIKIWNLAVPTV 92 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~----~V~-sLafSp---dg~-~LaSgs~------DGtV~VWDl~tg~~ 92 (845)
+..+++++.|+.|.-+|..+|+.+........ .+. ...... +++ .+++++. +|.|..+|..+|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 45678888899999999999999877653220 111 111111 233 5666543 78999999999998
Q ss_pred EEEEcCCCCCe-----------------------------------------EEEEEccCCCEEEEEEC-----------
Q psy467 93 QRTLNGHKSSI-----------------------------------------TSVDFHPYGDYLCSGSL----------- 120 (845)
Q Consensus 93 v~~l~~h~~~V-----------------------------------------~~lafspdg~~Lasgs~----------- 120 (845)
+.........+ ..+++.|+...++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 87764321000 12456677777776663
Q ss_pred ---------C----CeEEEEECCCCceEEEEcC--CCC-------CeEEEEEe-cCCC---EEEEEeCCCcEEEeeeecc
Q psy467 121 ---------D----SFIKLWDLRRKGCIYTYRG--HSK-------SINSIRFS-PDGQ---WIASGGEDGVVRIGASFHL 174 (845)
Q Consensus 121 ---------D----G~I~IWDl~t~~~l~~~~~--h~~-------~V~sLafS-Pdg~---~Lasgs~DG~I~I~~~~~~ 174 (845)
| +.|..+|..+++.+..+.. |.. ...-+... .+|+ .++.++.+|.+++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~------ 350 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYV------ 350 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEE------
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEE------
Confidence 2 5899999999999988753 211 11112222 4664 6778889999999
Q ss_pred CCceeEEEECCCCccC
Q psy467 175 TNTSIHVVDLSLVHPL 190 (845)
Q Consensus 175 ~~~~I~vWDl~tg~~l 190 (845)
+|..+|+.+
T Consensus 351 -------lD~~tG~~l 359 (582)
T 1flg_A 351 -------VDRSNGKLQ 359 (582)
T ss_dssp -------EETTTCCEE
T ss_pred -------EECCCCCEe
Confidence 999988873
No 250
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.40 E-value=0.00033 Score=74.83 Aligned_cols=155 Identities=14% Similarity=0.131 Sum_probs=94.4
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCC--cEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG--SIKIW 85 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG--tV~VW 85 (845)
+.+|... .....++|++ +++++++...++.|..||.... ....+. .......++++++++++++....+ .|..+
T Consensus 25 ~~~~p~~-~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~ 100 (306)
T 2p4o_A 25 ITSFPVN-TFLENLASAP-DGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSL 100 (306)
T ss_dssp EEEECTT-CCEEEEEECT-TSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred eEeCCCC-CCcceEEECC-CCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEE
Confidence 3455433 5678999999 8887777768899999997653 333333 345689999999999666554332 47777
Q ss_pred ECCCCcEEEEEcC-CCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce-EEEEc---------CCCCCeEEEEEecCC
Q psy467 86 NLAVPTVQRTLNG-HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC-IYTYR---------GHSKSINSIRFSPDG 154 (845)
Q Consensus 86 Dl~tg~~v~~l~~-h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~-l~~~~---------~h~~~V~sLafSPdg 154 (845)
+..+++....... .......++..+++..+++-..++.|.++|..++.. +.... ..-.....+ ++++
T Consensus 101 d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg 178 (306)
T 2p4o_A 101 VKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFG 178 (306)
T ss_dssp ECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEET
T ss_pred cCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCC
Confidence 8777775433321 222334555555554444444588999999875432 21111 011234555 7777
Q ss_pred CEEEEEe-CCCcEEE
Q psy467 155 QWIASGG-EDGVVRI 168 (845)
Q Consensus 155 ~~Lasgs-~DG~I~I 168 (845)
++|+.+. ..+.|..
T Consensus 179 ~~lyv~d~~~~~I~~ 193 (306)
T 2p4o_A 179 NFLYVSNTEKMLLLR 193 (306)
T ss_dssp TEEEEEETTTTEEEE
T ss_pred CEEEEEeCCCCEEEE
Confidence 7665554 4556666
No 251
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.38 E-value=4.3e-05 Score=90.24 Aligned_cols=144 Identities=10% Similarity=0.090 Sum_probs=97.4
Q ss_pred EEEEeCCCeEEEEECCCCeeEEEecCCC----CCeEE-EEEcCCCCEEEEEE------CCCcEEEEECCCCcEEEEEcCC
Q psy467 31 LATGGDDKKVNLWALGKSNCIMSLSGHS----TPVES-VQFGNGEETLSAGC------QSGSIKIWNLAVPTVQRTLNGH 99 (845)
Q Consensus 31 LaTgs~DG~I~IWdl~t~~~i~~l~~h~----~~V~s-LafSpdg~~LaSgs------~DGtV~VWDl~tg~~v~~l~~h 99 (845)
|++++.|+.|.-+|..+|+.+....... ..+.+ .... ++ .+++++ .+|.|..+|..+|+.+..+...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 7788889999999999999987765322 01111 1111 33 555554 3799999999999999887532
Q ss_pred CCC-------------------------------------e-EEEEEccCCCEEEEEECC----------------CeEE
Q psy467 100 KSS-------------------------------------I-TSVDFHPYGDYLCSGSLD----------------SFIK 125 (845)
Q Consensus 100 ~~~-------------------------------------V-~~lafspdg~~Lasgs~D----------------G~I~ 125 (845)
... + ..+++.++...++.++.+ +.|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 211 0 134566777788877665 3899
Q ss_pred EEECCCCceEEEEcCCCCC---------eEEEEEe-cCC---CEEEEEeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 126 LWDLRRKGCIYTYRGHSKS---------INSIRFS-PDG---QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 126 IWDl~t~~~l~~~~~h~~~---------V~sLafS-Pdg---~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
.+|..+++.+..+...... ..-+... .+| ..++.++.+|.+++ +|..+|+.
T Consensus 282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~-------------lD~~tG~~ 345 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYT-------------LDRTDGAL 345 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEE-------------EETTTCCE
T ss_pred EEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEE-------------EECCCCCE
Confidence 9999999999887643221 1112222 467 46777888999988 99988887
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.35 E-value=0.00018 Score=77.33 Aligned_cols=99 Identities=7% Similarity=0.005 Sum_probs=63.4
Q ss_pred CCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcC--------------------CCCCeEEEEEccCCCEEEEE
Q psy467 59 TPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG--------------------HKSSITSVDFHPYGDYLCSG 118 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~--------------------h~~~V~~lafspdg~~Lasg 118 (845)
....+++|++++++++++..++.|..|+..++... .+.. .......+++.+++..|+++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 34677889999987888888999999998865533 2210 01347889999833456666
Q ss_pred ECCCeEEEEECCCCceEEEEcC-----CCCCeEEEEEec-CCCEEEE
Q psy467 119 SLDSFIKLWDLRRKGCIYTYRG-----HSKSINSIRFSP-DGQWIAS 159 (845)
Q Consensus 119 s~DG~I~IWDl~t~~~l~~~~~-----h~~~V~sLafSP-dg~~Las 159 (845)
...+.|..+|..++.. ..+.. .......+++.+ +|++.++
T Consensus 98 d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~ 143 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFT 143 (322)
T ss_dssp ETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEE
T ss_pred ECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEE
Confidence 6566688888765432 22211 112456777777 7765444
No 253
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.27 E-value=0.00011 Score=77.36 Aligned_cols=190 Identities=14% Similarity=0.154 Sum_probs=123.9
Q ss_pred cEEEEEcCCCCC--eEEEEEccCCCEEEEEECCC--eEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCc
Q psy467 91 TVQRTLNGHKSS--ITSVDFHPYGDYLCSGSLDS--FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGV 165 (845)
Q Consensus 91 ~~v~~l~~h~~~--V~~lafspdg~~Lasgs~DG--~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~ 165 (845)
+.+.++. |... ...+.|+ ++.++.+++.+| .|+++|+.+++.+..+... .........++++.|.... .++.
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCE
Confidence 3456664 5443 4789998 666666777666 8999999999999888643 3343333333355554444 4677
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhh
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
+.+ ||..+.+. +..+.....+
T Consensus 109 v~v-------------~D~~t~~~--------------------~~ti~~~~eG-------------------------- 129 (262)
T 3nol_A 109 GFV-------------WNIRNLRQ--------------------VRSFNYDGEG-------------------------- 129 (262)
T ss_dssp EEE-------------EETTTCCE--------------------EEEEECSSCC--------------------------
T ss_pred EEE-------------EECccCcE--------------------EEEEECCCCc--------------------------
Confidence 777 99998888 5555432221
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC--C-
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN--S- 322 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh--~- 322 (845)
+.++ +++. .|+.+..++.|.++|..+.+.+.++... .
T Consensus 130 ---------~glt--~dg~-----------------------------~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~ 169 (262)
T 3nol_A 130 ---------WGLT--HNDQ-----------------------------YLIMSDGTPVLRFLDPESLTPVRTITVTAHGE 169 (262)
T ss_dssp ---------CCEE--ECSS-----------------------------CEEECCSSSEEEEECTTTCSEEEEEECEETTE
T ss_pred ---------eEEe--cCCC-----------------------------EEEEECCCCeEEEEcCCCCeEEEEEEeccCCc
Confidence 2222 2333 4444445788999999999888877642 1
Q ss_pred --CCEEEEEEeCCCCEEEEEeC-CC-EEEEEecCCceEEEecCC------------CCCeEEEEEc-CCceEEEEEEEE
Q psy467 323 --STIRRLTFSEGGECLLGGDT-EG-LKVYGWEPARQYDAQPMG------------WGKVQDLAVT-GTQLWFRRVGTW 384 (845)
Q Consensus 323 --~~VtslafSpdG~~Lasgs~-DG-I~IWDl~tgk~l~tl~~h------------~~~VtsVafS-dg~lLaaSVsiW 384 (845)
..++.+.|. +|+ |.+... +. |.+.|..+++.+..+... ....+.|||+ +++.|.++-..|
T Consensus 170 ~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 170 ELPELNELEWV-DGE-IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp ECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred cccccceeEEE-CCE-EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 345668887 675 555554 44 999999999998877542 1356899999 666666653333
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.24 E-value=0.0016 Score=71.25 Aligned_cols=150 Identities=16% Similarity=0.036 Sum_probs=94.2
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~v 93 (845)
.+..+|.+..+ .+ +|+.+. ...|+..++........+. ....+..++|++.+..|.... ..+.|..+++......
T Consensus 33 ~d~~~C~~~~~-~~-~ll~~~-~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 33 PDRRSCKALGP-EP-VLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE 108 (349)
T ss_dssp TTSSCEEESSS-CC-EEEEEC-BSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCCCccccccc-Cc-eeEeec-ccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCce
Confidence 34456666655 33 444443 3458888886655444444 344588999998766666554 5688999999876544
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEE-EECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-C-CcEEE
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCS-GSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE-D-GVVRI 168 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Las-gs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~-D-G~I~I 168 (845)
..+.........+++.+.+..|+. -...+.|.+.++........+...-.....++++|.+..|+.... . +.|..
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r 186 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEA 186 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEE
Confidence 444433344578999886655544 445678999998754433333334456789999986665554443 2 44555
No 255
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.24 E-value=0.0031 Score=76.41 Aligned_cols=300 Identities=10% Similarity=0.053 Sum_probs=169.7
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-------CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-------GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-------~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
..|.++...+ +|.+.+ |+.+ -+.+||..+++...... -....|.++...++|. |..|+..+-|.++|..
T Consensus 211 ~~i~~i~~d~-~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~ 286 (781)
T 3v9f_A 211 NDVRCIYKDT-NGNIWI-GTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQ 286 (781)
T ss_dssp SSEEEEEECT-TCCEEE-EETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETT
T ss_pred CceeEEEEcC-CCCEEE-EeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCC
Confidence 4688888877 666554 4445 58899987665432211 1245799999888775 5556665678999988
Q ss_pred CCcEEEEEc--------------CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc---------CCCCCe
Q psy467 89 VPTVQRTLN--------------GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR---------GHSKSI 145 (845)
Q Consensus 89 tg~~v~~l~--------------~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~---------~h~~~V 145 (845)
++....... .....|.++...++|. |..|+.++-|..++..+........ .....|
T Consensus 287 ~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 365 (781)
T 3v9f_A 287 QNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVV 365 (781)
T ss_dssp CC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCE
T ss_pred CCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcce
Confidence 765332211 1235688998888876 5667767778899887654332211 123568
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCC-----CCCCCCCcceeecCCCCeEEEEecCCCCC
Q psy467 146 NSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLG-----TPPPQYTSSVPFSHNTSLRKSFTKGRPGG 220 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~-----~~~~~~i~svs~spdg~~l~~~~~h~~~~ 220 (845)
.++...++|++ ..|+.++-+.. ||..++.... ......+.++...+++.+.... ...+
T Consensus 366 ~~i~~d~~g~l-Wigt~~~Gl~~-------------~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt--~~~G- 428 (781)
T 3v9f_A 366 SSVCDDGQGKL-WIGTDGGGINV-------------FENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGT--YLGN- 428 (781)
T ss_dssp EEEEECTTSCE-EEEEBSSCEEE-------------EETTEEEEECC-----CCCSBEEEEEECTTSCEEEEE--TTEE-
T ss_pred EEEEEcCCCCE-EEEeCCCcEEE-------------EECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEe--ccCC-
Confidence 89998887774 45565555777 6655432211 0112223333333333322110 0001
Q ss_pred ccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCC-cCCCCcccccccCceeEEEcCCCCcccceEEEEEe
Q psy467 221 TKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRS-LNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSS 299 (845)
Q Consensus 221 ~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~-~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs 299 (845)
+ ..+.+... +..-.........|.++...++|. |..|+
T Consensus 429 ------l-----------------------------~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~------lwigt 467 (781)
T 3v9f_A 429 ------I-----------------------------SYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK------IWIGT 467 (781)
T ss_dssp ------E-----------------------------EEECSSSCEEEECCSTTTCCCCEEEEEECTTSE------EEEEE
T ss_pred ------E-----------------------------EEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC------EEEEE
Confidence 1 11222110 000000001124567787777775 44444
Q ss_pred CCCeEEEEECCCCeEEEEecCC-----CCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecC----CCCCeEEEE
Q psy467 300 ADRTVNFWDLEKFSLVSTTEKN-----SSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPM----GWGKVQDLA 370 (845)
Q Consensus 300 ~DG~I~IWDl~s~~~l~tl~gh-----~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~----h~~~VtsVa 370 (845)
. +-|..||..+++........ ...|.+++..++|.+.+....+||..|+..+++. ..+.. ....|.++.
T Consensus 468 ~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~ 545 (781)
T 3v9f_A 468 H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQIY 545 (781)
T ss_dssp T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEEE
T ss_pred C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEEE
Confidence 4 56899998876543322211 3579999999999866655446788888776543 33321 235688998
Q ss_pred Ec-CCceEEEE
Q psy467 371 VT-GTQLWFRR 380 (845)
Q Consensus 371 fS-dg~lLaaS 380 (845)
.. +|.+.+++
T Consensus 546 ~d~~g~lWi~T 556 (781)
T 3v9f_A 546 RSSKGQMWLAT 556 (781)
T ss_dssp ECTTSCEEEEE
T ss_pred ECCCCCEEEEE
Confidence 88 88877766
No 256
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.24 E-value=0.00017 Score=86.31 Aligned_cols=103 Identities=15% Similarity=0.120 Sum_probs=75.7
Q ss_pred CCeEEEEECCCCeeEEEecCC--C-----------------------------CCeEEEEEcCCCCEEEEEECCC-----
Q psy467 37 DKKVNLWALGKSNCIMSLSGH--S-----------------------------TPVESVQFGNGEETLSAGCQSG----- 80 (845)
Q Consensus 37 DG~I~IWdl~t~~~i~~l~~h--~-----------------------------~~V~sLafSpdg~~LaSgs~DG----- 80 (845)
+|.|..+|..+|+.+.++... . .....++++++...++.++.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 589999999999998877521 0 0112468888888888887665
Q ss_pred --------------cEEEEECCCCcEEEEEcC--CC-------CCeEEEEEccCCC---EEEEEECCCeEEEEECCCCce
Q psy467 81 --------------SIKIWNLAVPTVQRTLNG--HK-------SSITSVDFHPYGD---YLCSGSLDSFIKLWDLRRKGC 134 (845)
Q Consensus 81 --------------tV~VWDl~tg~~v~~l~~--h~-------~~V~~lafspdg~---~Lasgs~DG~I~IWDl~t~~~ 134 (845)
.|..+|.++|+.+..++. |. .+.....+..+|+ .++.++.+|.++++|..+|+.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 399999999999988764 22 2233333334665 688999999999999999998
Q ss_pred EEEEc
Q psy467 135 IYTYR 139 (845)
Q Consensus 135 l~~~~ 139 (845)
+....
T Consensus 337 l~~~~ 341 (668)
T 1kv9_A 337 ISAEK 341 (668)
T ss_dssp EEEEE
T ss_pred ecccc
Confidence 85543
No 257
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.22 E-value=0.00036 Score=72.72 Aligned_cols=197 Identities=10% Similarity=0.057 Sum_probs=127.0
Q ss_pred eeEEEecCCC--CCeEEEEEcCCCCEEEEEECC--CcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEE-EECCCe
Q psy467 49 NCIMSLSGHS--TPVESVQFGNGEETLSAGCQS--GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCS-GSLDSF 123 (845)
Q Consensus 49 ~~i~~l~~h~--~~V~sLafSpdg~~LaSgs~D--GtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Las-gs~DG~ 123 (845)
+.+.++ .|. .-...+.|+. +.+..+.+.+ ..|+++|+++++.+..+..... ........+++.|+. .-.++.
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCE
Confidence 345555 354 4577999986 5555555554 4899999999999988864332 333333333555544 446789
Q ss_pred EEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceee
Q psy467 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPF 203 (845)
Q Consensus 124 I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~ 203 (845)
+.+||..+.+.+.++.... .-+.++ +|++.|+++..++.|.+ +|..+.+.
T Consensus 87 v~v~D~~tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~-------------iDp~t~~~-------------- 136 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRK-------------LDPDTLQQ-------------- 136 (243)
T ss_dssp EEEEETTTTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEE-------------ECTTTCCE--------------
T ss_pred EEEEECCcCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEE-------------EeCCCCeE--------------
Confidence 9999999999999987533 234444 56777777767788888 99988776
Q ss_pred cCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEE
Q psy467 204 SHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSI 283 (845)
Q Consensus 204 spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slaf 283 (845)
+..+.-...+.. +. ....+.+. ++.
T Consensus 137 ------~~~I~V~~~g~~-----~~------------------------~lNeLe~~-~G~------------------- 161 (243)
T 3mbr_X 137 ------VGSIKVTAGGRP-----LD------------------------NLNELEWV-NGE------------------- 161 (243)
T ss_dssp ------EEEEECEETTEE-----CC------------------------CEEEEEEE-TTE-------------------
T ss_pred ------EEEEEEccCCcc-----cc------------------------cceeeEEe-CCE-------------------
Confidence 443322111100 00 00222222 333
Q ss_pred cCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC-------------CCCEEEEEEeCCCCEEEEEeCC
Q psy467 284 LPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN-------------SSTIRRLTFSEGGECLLGGDTE 343 (845)
Q Consensus 284 SPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh-------------~~~VtslafSpdG~~Lasgs~D 343 (845)
+++..-.+..|.+.|..+++.+..+.-. ....+.|+|+|+++.|++.+..
T Consensus 162 ----------lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 162 ----------LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp ----------EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred ----------EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 5555556789999999999998887621 1356899999988777776654
No 258
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.22 E-value=0.0039 Score=75.46 Aligned_cols=302 Identities=13% Similarity=0.057 Sum_probs=171.5
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec-------CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS-------GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~-------~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~ 88 (845)
..|.++...+ +|. |..|+.++-|..|+..+++...... -....|.++...+++.+.+ |+.+ -+.+||..
T Consensus 163 ~~i~~i~~d~-~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~ 238 (781)
T 3v9f_A 163 EQTWTATEAE-DGK-LYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWI-GTSK-GLALFNAN 238 (781)
T ss_dssp CCEEEEEEEE-TTE-EEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEE-EETT-EEEEEETT
T ss_pred cceEEEEECC-CCC-EEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEE-EeCC-cHheECCC
Confidence 4588888876 555 4456666568899987765433211 0135699999988887555 4444 69999988
Q ss_pred CCcEEEEEc-------CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc--------------CCCCCeEE
Q psy467 89 VPTVQRTLN-------GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR--------------GHSKSINS 147 (845)
Q Consensus 89 tg~~v~~l~-------~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~--------------~h~~~V~s 147 (845)
+++...... .....|.++...++|. |..|+..+-|.++|..++....... .....|.+
T Consensus 239 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~ 317 (781)
T 3v9f_A 239 TETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARY 317 (781)
T ss_dssp TTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEE
T ss_pred CCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEE
Confidence 765432211 1235688998887775 5566664568899987665332111 12456899
Q ss_pred EEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccC-----------CCCCCCCCcceeecCCCCeEEEEecC
Q psy467 148 IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL-----------GTPPPQYTSSVPFSHNTSLRKSFTKG 216 (845)
Q Consensus 148 LafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l-----------~~~~~~~i~svs~spdg~~l~~~~~h 216 (845)
+...++|++ ..|+.++-|.. |+..+.... ..+....+.++....+|.+.....
T Consensus 318 i~~D~~g~l-Wigt~~~Gl~~-------------~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~-- 381 (781)
T 3v9f_A 318 IFQDSFNNI-WIGTWGGGINF-------------ISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTD-- 381 (781)
T ss_dssp EEECSSCCE-EEEEBSSCEEE-------------ECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEB--
T ss_pred EEEeCCCCE-EEEecCCeEEE-------------eCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeC--
Confidence 999988874 45665555666 554432210 111223344555555444322110
Q ss_pred CCCCccceeeEeeecccccccccccchhhhhhccCCCceeEE-EcCCCCcCCCCcccccccCceeEEEcCCCCcccceEE
Q psy467 217 RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAI-FQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILT 295 (845)
Q Consensus 217 ~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~-fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lL 295 (845)
..+ +..+.... ..+. +.... ......|.+++..++|. |
T Consensus 382 ~~G-------l~~~~~~~--------------------~~~~~~~~~~--------~~~~~~v~~i~~d~~g~------l 420 (781)
T 3v9f_A 382 GGG-------INVFENGK--------------------RVAIYNKENR--------ELLSNSVLCSLKDSEGN------L 420 (781)
T ss_dssp SSC-------EEEEETTE--------------------EEEECC-------------CCCSBEEEEEECTTSC------E
T ss_pred CCc-------EEEEECCC--------------------CeEEEccCCC--------CCCCcceEEEEECCCCC------E
Confidence 111 11111000 0000 00000 01124567777777776 4
Q ss_pred EEEeCCCeEEEEECCCCeEEEEec--CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecCC-----CCCeEE
Q psy467 296 TSSSADRTVNFWDLEKFSLVSTTE--KNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPMG-----WGKVQD 368 (845)
Q Consensus 296 atgs~DG~I~IWDl~s~~~l~tl~--gh~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~h-----~~~Vts 368 (845)
..|+.++-+..||..+++...... .....|.++...++|.+.+ |+.+||.+|+..+++........ ...|.+
T Consensus 421 Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 499 (781)
T 3v9f_A 421 WFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRS 499 (781)
T ss_dssp EEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EETTEEEEEESSSSSCCEEECTTTSSCSCSCEEE
T ss_pred EEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EECCceEEEeCCCCeEEecccCcccccccceeEE
Confidence 456666779999988775433221 1346799999988887554 45566999998876544322222 367899
Q ss_pred EEEc-CCceEEEE
Q psy467 369 LAVT-GTQLWFRR 380 (845)
Q Consensus 369 VafS-dg~lLaaS 380 (845)
+... +|.+.+++
T Consensus 500 i~~d~~g~lWigt 512 (781)
T 3v9f_A 500 IAQDSEGRFWIGT 512 (781)
T ss_dssp EEECTTCCEEEEE
T ss_pred EEEcCCCCEEEEE
Confidence 9888 88877766
No 259
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.22 E-value=0.00011 Score=77.48 Aligned_cols=158 Identities=11% Similarity=0.111 Sum_probs=112.5
Q ss_pred EEeccCCCc--EEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCe--EEEEEcCCCCEEEEEECCCcEEE
Q psy467 9 EDFMAHGAS--VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPV--ESVQFGNGEETLSAGCQSGSIKI 84 (845)
Q Consensus 9 ~~L~gH~~~--V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V--~sLafSpdg~~LaSgs~DGtV~V 84 (845)
+++ .|... ...|.|+ ++.++.+.+.+|.|+++|+++++.+..+ -. ... ..+++..+ ...+....++.+.+
T Consensus 47 ~~~-phd~~~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~-~Ly~ltw~~~~v~V 120 (268)
T 3nok_A 47 REY-PHATNAFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGE-RLYQLTWTEGLLFT 120 (268)
T ss_dssp EEE-ECCTTCCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSS-CEEEEESSSCEEEE
T ss_pred EEE-cCCCccccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCC-EEEEEEccCCEEEE
Confidence 445 46543 4789996 4677778888899999999999988877 22 233 34555432 33334446899999
Q ss_pred EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCC-----CCeEEEEEecCCCEEEE
Q psy467 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS-----KSINSIRFSPDGQWIAS 159 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~-----~~V~sLafSPdg~~Las 159 (845)
||.++.+.+.++... ..-..++ +|++.|+.+..++.|.++|..+.+.+.++.... ..++.+.|. +|..++.
T Consensus 121 ~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyan 196 (268)
T 3nok_A 121 WSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYAN 196 (268)
T ss_dssp EETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred EECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEE
Confidence 999999999999743 2223444 568888888788999999999999888876422 245677777 6765555
Q ss_pred EeCCCcEEEeeeeccCCceeEEEECCCCcc
Q psy467 160 GGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189 (845)
Q Consensus 160 gs~DG~I~I~~~~~~~~~~I~vWDl~tg~~ 189 (845)
...+..|.+ .|..+++.
T Consensus 197 vw~s~~I~v-------------IDp~TG~V 213 (268)
T 3nok_A 197 IWHSSDVLE-------------IDPATGTV 213 (268)
T ss_dssp ETTCSEEEE-------------ECTTTCBE
T ss_pred ECCCCeEEE-------------EeCCCCcE
Confidence 546677777 89988887
No 260
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.20 E-value=0.00015 Score=76.37 Aligned_cols=195 Identities=9% Similarity=0.003 Sum_probs=126.7
Q ss_pred eeEEEecCCC--CCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEE-EEECCCeEE
Q psy467 49 NCIMSLSGHS--TPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC-SGSLDSFIK 125 (845)
Q Consensus 49 ~~i~~l~~h~--~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~La-sgs~DG~I~ 125 (845)
+.+.++. |. .-...+.|+ ++.+.++.+.+|.|+++|+++++.+..+ . ..........++++.|+ ..-.++.+.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEE
T ss_pred EEEEEEc-CCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEE
Confidence 3445553 43 345889998 4566677777889999999999888777 2 23333322333444444 444678999
Q ss_pred EEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecC
Q psy467 126 LWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSH 205 (845)
Q Consensus 126 IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~sp 205 (845)
+||..+.+.+.++... ..-+.++ +|++.|+.+..++.|.+ +|..+.+.
T Consensus 120 V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~-------------iDp~T~~v---------------- 167 (268)
T 3nok_A 120 TWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTF-------------HEPDGFAL---------------- 167 (268)
T ss_dssp EEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEE-------------ECTTTCCE----------------
T ss_pred EEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEE-------------EcCCCCeE----------------
Confidence 9999999999998743 2224444 56788887777888888 99988777
Q ss_pred CCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC
Q psy467 206 NTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP 285 (845)
Q Consensus 206 dg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP 285 (845)
+..+.-...+.. +. ....+.|. +|.
T Consensus 168 ----~~~I~V~~~g~~-----v~------------------------~lNeLe~~-dG~--------------------- 192 (268)
T 3nok_A 168 ----VGAVQVKLRGQP-----VE------------------------LINELECA-NGV--------------------- 192 (268)
T ss_dssp ----EEEEECEETTEE-----CC------------------------CEEEEEEE-TTE---------------------
T ss_pred ----EEEEEeCCCCcc-----cc------------------------cccccEEe-CCE---------------------
Confidence 443322111100 00 00223333 333
Q ss_pred CCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCC-------------CCCEEEEEEeCCCCEEEEEeC
Q psy467 286 QSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN-------------SSTIRRLTFSEGGECLLGGDT 342 (845)
Q Consensus 286 dg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh-------------~~~VtslafSpdG~~Lasgs~ 342 (845)
+.+....++.|.+.|..+++.+..+.-. ....+.|+|+|+++.|++.+.
T Consensus 193 --------lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 193 --------IYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp --------EEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred --------EEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 6666666889999999999998887631 135789999998766666554
No 261
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.19 E-value=0.0016 Score=72.29 Aligned_cols=148 Identities=16% Similarity=0.036 Sum_probs=92.3
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~v~~ 95 (845)
.-.|.+..+ . .+|+.+. ...|+.+++........+. ....+..++|++.+..|+... ..+.|..+++........
T Consensus 78 ~~~C~~~~~-~-~~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~ 153 (386)
T 3v65_B 78 RRSCKALGP-E-PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV 153 (386)
T ss_dssp SSCEEECSS-C-CEEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE
T ss_pred CCeECCccc-c-ceeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE
Confidence 344555544 3 3444443 3568888887665544444 344588999998666665554 568899999987655444
Q ss_pred EcCCCCCeEEEEEccCCCEEEEE-ECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC--CcEEE
Q psy467 96 LNGHKSSITSVDFHPYGDYLCSG-SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED--GVVRI 168 (845)
Q Consensus 96 l~~h~~~V~~lafspdg~~Lasg-s~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D--G~I~I 168 (845)
+.........+++.+.+..|+.+ ...+.|.+.++........+...-.....++++|.+..|+..... +.|..
T Consensus 154 ~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r 229 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEA 229 (386)
T ss_dssp ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEE
Confidence 44333445678898866555544 456788888886544333343344567899999877666555432 34544
No 262
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.14 E-value=0.00032 Score=82.80 Aligned_cols=111 Identities=8% Similarity=0.112 Sum_probs=75.9
Q ss_pred CCEEEEEeC-CCeEEEEEC-CCCeeEEEecCCCCC-----------eEEEEEcCCCCE----EEEEECCCcEEEEECCCC
Q psy467 28 GQVLATGGD-DKKVNLWAL-GKSNCIMSLSGHSTP-----------VESVQFGNGEET----LSAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 28 g~~LaTgs~-DG~I~IWdl-~t~~~i~~l~~h~~~-----------V~sLafSpdg~~----LaSgs~DGtV~VWDl~tg 90 (845)
+..|++++. ++.|.-+|. .+|+.+.++...... ...++++|.+.. |+.++.|+.|..+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 346667777 889999999 899998887643211 123455444444 888888999999999999
Q ss_pred cEEEEEcCCCC----CeEE-EEEccCCCEEEEEE------CCCeEEEEECCCCceEEEEcC
Q psy467 91 TVQRTLNGHKS----SITS-VDFHPYGDYLCSGS------LDSFIKLWDLRRKGCIYTYRG 140 (845)
Q Consensus 91 ~~v~~l~~h~~----~V~~-lafspdg~~Lasgs------~DG~I~IWDl~t~~~l~~~~~ 140 (845)
+.+........ .+.+ ..+. ++ .+++++ .+|.|+.+|.++++.+.++..
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 99887653220 1211 1111 34 555554 379999999999999988764
No 263
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.14 E-value=7.3e-05 Score=89.14 Aligned_cols=165 Identities=11% Similarity=0.029 Sum_probs=97.2
Q ss_pred EEEEecCCCCEEEEEeCCC-----------eEEEEECCCCee--EEEec-CCCCCeEEEEEcCCCCEEEEEEC-CCcEEE
Q psy467 20 CLALGKKSGQVLATGGDDK-----------KVNLWALGKSNC--IMSLS-GHSTPVESVQFGNGEETLSAGCQ-SGSIKI 84 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs~DG-----------~I~IWdl~t~~~--i~~l~-~h~~~V~sLafSpdg~~LaSgs~-DGtV~V 84 (845)
++++.+.++++++.|+.+. .+.+||..+++- +..+. .+.....++++..++..+++|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 5566654678888887543 588999877642 22332 23334456778889999999884 568999
Q ss_pred EECCCCcEEEEEcCCCC-CeEEEEEccCCCEEEEEE-CC-----CeEEEEECCCCceEEEE----cCCCCCeEEEEEecC
Q psy467 85 WNLAVPTVQRTLNGHKS-SITSVDFHPYGDYLCSGS-LD-----SFIKLWDLRRKGCIYTY----RGHSKSINSIRFSPD 153 (845)
Q Consensus 85 WDl~tg~~v~~l~~h~~-~V~~lafspdg~~Lasgs-~D-----G~I~IWDl~t~~~l~~~----~~h~~~V~sLafSPd 153 (845)
||..+++....-..+.. .-.+++..++++.++.|+ .+ ..+.+||..+++....- ......-....+..+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence 99987754332221111 223556667899999988 44 46899999876543320 000000001122345
Q ss_pred CCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCc
Q psy467 154 GQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVH 188 (845)
Q Consensus 154 g~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~ 188 (845)
+..++.++.+|.+.. ......+..||..+..
T Consensus 350 ~~iyv~Gg~~g~~~~----~~~~~~v~~yd~~~~~ 380 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQ----AGPSTAMNWYYTSGSG 380 (656)
T ss_dssp CSCCEEECGGGCEEE----CCSSSEEEEEECSTTC
T ss_pred CceEEEECCCCcEEE----ecCccceeeeecCCcc
Confidence 666677777776554 1223345557766543
No 264
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.13 E-value=0.0003 Score=82.55 Aligned_cols=110 Identities=10% Similarity=0.029 Sum_probs=75.5
Q ss_pred CEEEEEeC------CCeEEEEECCCCeeEEEecCCCCC-------------------------------------e-EEE
Q psy467 29 QVLATGGD------DKKVNLWALGKSNCIMSLSGHSTP-------------------------------------V-ESV 64 (845)
Q Consensus 29 ~~LaTgs~------DG~I~IWdl~t~~~i~~l~~h~~~-------------------------------------V-~sL 64 (845)
..+++++. ++.|..+|..+++.+.++...... + ..+
T Consensus 161 g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~ 240 (571)
T 2ad6_A 161 DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWY 240 (571)
T ss_dssp TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCC
T ss_pred CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeE
Confidence 34555554 789999999999998876532110 0 135
Q ss_pred EEcCCCCEEEEEECC----------------CcEEEEECCCCcEEEEEcCC--C--------CCeEEEEEccCCC---EE
Q psy467 65 QFGNGEETLSAGCQS----------------GSIKIWNLAVPTVQRTLNGH--K--------SSITSVDFHPYGD---YL 115 (845)
Q Consensus 65 afSpdg~~LaSgs~D----------------GtV~VWDl~tg~~v~~l~~h--~--------~~V~~lafspdg~---~L 115 (845)
++.++...++.++.+ +.|..+|.++|+.+..++.. . .++ .+....+|+ .+
T Consensus 241 a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v 319 (571)
T 2ad6_A 241 AYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLL 319 (571)
T ss_dssp EEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEE
T ss_pred EEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEE
Confidence 666766677666532 35999999999998887532 1 122 123334674 57
Q ss_pred EEEECCCeEEEEECCCCceEEEEc
Q psy467 116 CSGSLDSFIKLWDLRRKGCIYTYR 139 (845)
Q Consensus 116 asgs~DG~I~IWDl~t~~~l~~~~ 139 (845)
+.++.+|.+.++|..+++.+..+.
T Consensus 320 ~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 320 SHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEeCCCcEEEEEECCCCCEEeeec
Confidence 788899999999999999887765
No 265
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.12 E-value=0.0019 Score=68.77 Aligned_cols=240 Identities=11% Similarity=0.017 Sum_probs=133.6
Q ss_pred eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC-C-eEEE
Q psy467 49 NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD-S-FIKL 126 (845)
Q Consensus 49 ~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D-G-~I~I 126 (845)
+.+..+.. ......++|+++++.+++-..++.|..||... +....+. .......+++.++|+++++.... + .|..
T Consensus 23 ~~~~~~p~-~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 23 KIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred eEeEeCCC-CCCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 44455543 25678999999998777666789999999875 3444343 23468899999999866554432 2 4777
Q ss_pred EECCCCceEEEEcC-CCCCeEEEEEecCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecC
Q psy467 127 WDLRRKGCIYTYRG-HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSH 205 (845)
Q Consensus 127 WDl~t~~~l~~~~~-h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~sp 205 (845)
+|..+++....... .......++..+++..+++-..++.|.. +|..++..
T Consensus 100 ~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~-------------~d~~~~~~---------------- 150 (306)
T 2p4o_A 100 LVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWL-------------IDVVQPSG---------------- 150 (306)
T ss_dssp EECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEE-------------EETTTTEE----------------
T ss_pred EcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEE-------------EeCCCCcE----------------
Confidence 78777765433221 1223345555554443443334666666 77654321
Q ss_pred CCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcC
Q psy467 206 NTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILP 285 (845)
Q Consensus 206 dg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSP 285 (845)
+ +......... . .+.+. ....+.+ ++
T Consensus 151 --~-v~~~~~~~~~-------~--------------------------------~~~~~----------~~~pngi--s~ 176 (306)
T 2p4o_A 151 --S-IWLEHPMLAR-------S--------------------------------NSESV----------FPAANGL--KR 176 (306)
T ss_dssp --E-EEEECGGGSC-------S--------------------------------STTCC----------SCSEEEE--EE
T ss_pred --e-EEEECCcccc-------c--------------------------------cccCC----------CCcCCCc--Cc
Confidence 0 0000000000 0 00000 0011112 44
Q ss_pred CCCcccceEEEEEeCCCeEEEEECCC-CeE--EEEecCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEecCCceE--EEe
Q psy467 286 QSPMLCFILTTSSSADRTVNFWDLEK-FSL--VSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQY--DAQ 359 (845)
Q Consensus 286 dg~~~~~~lLatgs~DG~I~IWDl~s-~~~--l~tl~gh~~~VtslafSpdG~~Lasgs~DG-I~IWDl~tgk~l--~tl 359 (845)
+++. ++++-...+.|..||+.. ++. ...+.. ......++++++|++.++....+ |.+++.+ ++.. ..+
T Consensus 177 dg~~----lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~ 250 (306)
T 2p4o_A 177 FGNF----LYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQA 250 (306)
T ss_dssp ETTE----EEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECG
T ss_pred CCCE----EEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeec
Confidence 4431 555666678999999864 321 111111 12456789999998766655555 9999865 5553 234
Q ss_pred cCCCCCeEEEEEc----CCceEEEE
Q psy467 360 PMGWGKVQDLAVT----GTQLWFRR 380 (845)
Q Consensus 360 ~~h~~~VtsVafS----dg~lLaaS 380 (845)
......+++++|. +++.|.++
T Consensus 251 ~~~~~~p~~~a~~g~~~d~~~LyVt 275 (306)
T 2p4o_A 251 EQGVIGSTAVAFGQTEGDCTAIYVV 275 (306)
T ss_dssp GGTCTTEEEEEECCSTTTTTEEEEE
T ss_pred ccccCCceEEEEecccCCCCEEEEE
Confidence 4344678999996 55655544
No 266
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.09 E-value=0.01 Score=63.82 Aligned_cols=137 Identities=9% Similarity=0.001 Sum_probs=85.7
Q ss_pred EEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCC----CcEEEEEcCCCCCeE
Q psy467 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAV----PTVQRTLNGHKSSIT 104 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~t----g~~v~~l~~h~~~V~ 104 (845)
+|+.+.. ..|+..++.+.+....+. ....+..++|++.+..|+.+. ..+.|..+++.. ......+........
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEECC-CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 3444443 468999998776655554 445688999998776666554 468899999876 222223332334467
Q ss_pred EEEEccCCCEEEEE-ECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC--CcEEE
Q psy467 105 SVDFHPYGDYLCSG-SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED--GVVRI 168 (845)
Q Consensus 105 ~lafspdg~~Lasg-s~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D--G~I~I 168 (845)
.+++.+.+..|+.+ ...+.|.+.++........+...-.....++++|.+..|+.+... +.|..
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~ 147 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK 147 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEE
Confidence 89998765555544 567889999987543333333334567899999876665555432 45555
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.04 E-value=0.00051 Score=80.80 Aligned_cols=110 Identities=11% Similarity=0.050 Sum_probs=75.7
Q ss_pred EEEEEe------CCCeEEEEECCCCeeEEEecCCCCCe-----------------------------------------E
Q psy467 30 VLATGG------DDKKVNLWALGKSNCIMSLSGHSTPV-----------------------------------------E 62 (845)
Q Consensus 30 ~LaTgs------~DG~I~IWdl~t~~~i~~l~~h~~~V-----------------------------------------~ 62 (845)
.+++++ .+|.|.-+|..+|+.+.........+ .
T Consensus 170 ~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~ 249 (582)
T 1flg_A 170 LLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQ 249 (582)
T ss_dssp EEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCS
T ss_pred EEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccC
Confidence 565654 37899999999999887654211110 1
Q ss_pred EEEEcCCCCEEEEEEC--------------------C----CcEEEEECCCCcEEEEEcC--CC--------CCeEEEEE
Q psy467 63 SVQFGNGEETLSAGCQ--------------------S----GSIKIWNLAVPTVQRTLNG--HK--------SSITSVDF 108 (845)
Q Consensus 63 sLafSpdg~~LaSgs~--------------------D----GtV~VWDl~tg~~v~~l~~--h~--------~~V~~laf 108 (845)
.++++++...++.++. | +.|..+|..+|+.+..++. |. .++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 2456677777776663 2 5899999999999988753 22 1121 222
Q ss_pred c-cCCC---EEEEEECCCeEEEEECCCCceEEEEcC
Q psy467 109 H-PYGD---YLCSGSLDSFIKLWDLRRKGCIYTYRG 140 (845)
Q Consensus 109 s-pdg~---~Lasgs~DG~I~IWDl~t~~~l~~~~~ 140 (845)
. .+|+ .++.++.+|.++++|..+++.+..+..
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 2 4674 788899999999999999999877654
No 268
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.03 E-value=0.0013 Score=69.06 Aligned_cols=199 Identities=7% Similarity=0.069 Sum_probs=128.9
Q ss_pred EEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC-CCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG-HSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~-h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
+.+.+-.+.+..++|+|+++.++++...++.|...|.. ++.++.+.- -......|++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 56778778999999999556677778889999999987 888777642 2356889999998877666556788999988
Q ss_pred CCCcE---EEEEc------CCCCCeEEEEEccCCCEEEEEECCCeEEEEECC---CCceEEEEc-------CCCCCeEEE
Q psy467 88 AVPTV---QRTLN------GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR---RKGCIYTYR-------GHSKSINSI 148 (845)
Q Consensus 88 ~tg~~---v~~l~------~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~---t~~~l~~~~-------~h~~~V~sL 148 (845)
..... +.... ........++|+|.++.|+++.......+|.+. ....+..+. .+...+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 76442 22221 123456899999999877777765555555543 111122221 123457899
Q ss_pred EEecCCCEEEEEe-CCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEE
Q psy467 149 RFSPDGQWIASGG-EDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRK 211 (845)
Q Consensus 149 afSPdg~~Lasgs-~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~ 211 (845)
+++|....+++.+ ....+.. ++.....+..+.+..+..--.....+.-.+++.++|++..
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~---~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI 239 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQE---VTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI 239 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEE---ECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE
T ss_pred EEcCCCCeEEEEECCCCeEEE---EcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE
Confidence 9999655555444 4444544 4444445666666644321111134566899999997443
No 269
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.02 E-value=0.012 Score=65.75 Aligned_cols=138 Identities=9% Similarity=0.002 Sum_probs=88.4
Q ss_pred CEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCC----cEEEEEcCCCCCe
Q psy467 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVP----TVQRTLNGHKSSI 103 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg----~~v~~l~~h~~~V 103 (845)
.+|+.+. ...|+..++........+. ....+..++|++.+..|.... ..+.|..+++... .....+.......
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred ceeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 3555554 3589999987665544444 456789999998777666654 4678989998752 2333444344567
Q ss_pred EEEEEccCCCEEEE-EECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC--CCcEEE
Q psy467 104 TSVDFHPYGDYLCS-GSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE--DGVVRI 168 (845)
Q Consensus 104 ~~lafspdg~~Las-gs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~--DG~I~I 168 (845)
..+++.+.+..|+. -...+.|.+.++........+...-.....|+++|.+.+|+.... .+.|..
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~ 229 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK 229 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEE
Confidence 88999885555544 456778999998755444444444456889999997666655442 245555
No 270
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.01 E-value=0.015 Score=62.79 Aligned_cols=269 Identities=10% Similarity=0.002 Sum_probs=144.2
Q ss_pred eeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec----CCCCCeEEEEEcCCCCEEEEEECCC
Q psy467 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS----GHSTPVESVQFGNGEETLSAGCQSG 80 (845)
Q Consensus 5 lw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~----~h~~~V~sLafSpdg~~LaSgs~DG 80 (845)
-|+...+. ....+.+|.|.+ .+..++ ++.+|.| +...+.++.-.... .....+.+|.|++ +..++ ++..+
T Consensus 26 ~W~~~~~~-~~~~~~~v~~~~-~~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g 99 (327)
T 2xbg_A 26 PWEAIQLP-TTATILDMSFID-RHHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPP 99 (327)
T ss_dssp CEEEEECS-CSSCEEEEEESS-SSCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETT
T ss_pred CceEeecC-CCCcEEEEEECC-CCcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCC
Confidence 46555543 345799999976 667677 4567765 33344443322221 1245689999986 44444 44566
Q ss_pred cEEEEECCCCcEEEEEc---CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCce-EEEEcCCCCCeEEEEEecCCCE
Q psy467 81 SIKIWNLAVPTVQRTLN---GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC-IYTYRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 81 tV~VWDl~tg~~v~~l~---~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~-l~~~~~h~~~V~sLafSPdg~~ 156 (845)
.|.. ..+.|+.-..+. .+...+..+.+.+++..++++ .+|.|.. ....++. ..........+..+++.+++.+
T Consensus 100 ~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~ 176 (327)
T 2xbg_A 100 IMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEY 176 (327)
T ss_dssp EEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCE
T ss_pred eEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcE
Confidence 4433 333344333332 133457788887777655554 4564422 1222322 2222344567889999998887
Q ss_pred EEEEeCCCcEEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccc
Q psy467 157 IASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAES 236 (845)
Q Consensus 157 Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~ 236 (845)
++++ .+|.+.. .+|- .+.. -..+..
T Consensus 177 ~~~g-~~G~~~~------------S~d~-gG~t--------------------W~~~~~--------------------- 201 (327)
T 2xbg_A 177 VAVS-SRGSFYS------------TWEP-GQTA--------------------WEPHNR--------------------- 201 (327)
T ss_dssp EEEE-TTSSEEE------------EECT-TCSS--------------------CEEEEC---------------------
T ss_pred EEEE-CCCcEEE------------EeCC-CCCc--------------------eeECCC---------------------
Confidence 7665 4455444 0221 0111 000000
Q ss_pred cccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEE
Q psy467 237 EDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS 316 (845)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~ 316 (845)
+. ...+..+++.+++. ++ ..+.+|.+++++...++...
T Consensus 202 ------------------------~~------------~~~~~~~~~~~~g~-----~~-~~~~~G~~~~s~~D~G~tW~ 239 (327)
T 2xbg_A 202 ------------------------TT------------SRRLHNMGFTPDGR-----LW-MIVNGGKIAFSDPDNSENWG 239 (327)
T ss_dssp ------------------------CS------------SSCEEEEEECTTSC-----EE-EEETTTEEEEEETTEEEEEC
T ss_pred ------------------------CC------------CCccceeEECCCCC-----EE-EEeCCceEEEecCCCCCeeE
Confidence 00 01122333344443 44 44467887777533344333
Q ss_pred EecC----CCCCEEEEEEeCCCCEEEEEeCCCEEEEEecCCceEEEecC---CCCCeEEEEEc-CCceEEEE
Q psy467 317 TTEK----NSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPM---GWGKVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 317 tl~g----h~~~VtslafSpdG~~Lasgs~DGI~IWDl~tgk~l~tl~~---h~~~VtsVafS-dg~lLaaS 380 (845)
.+.. +...+.++++.+++.+++++...+| ++..+.|+....+.. ....+.++.|. ++++++++
T Consensus 240 ~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G 310 (327)
T 2xbg_A 240 ELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILG 310 (327)
T ss_dssp CCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEEC
T ss_pred eccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEc
Confidence 3321 2235889999998887777664435 456666766655542 34678899997 77777666
No 271
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.01 E-value=0.0011 Score=69.13 Aligned_cols=190 Identities=13% Similarity=0.117 Sum_probs=121.0
Q ss_pred cEEEEEcCCC--CCeEEEEEccCCCEEEEEECC--CeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEE-EeCCCc
Q psy467 91 TVQRTLNGHK--SSITSVDFHPYGDYLCSGSLD--SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS-GGEDGV 165 (845)
Q Consensus 91 ~~v~~l~~h~--~~V~~lafspdg~~Lasgs~D--G~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Las-gs~DG~ 165 (845)
+.+.++. |. .....+.|++ +.++.+.+.+ +.|+.+|+.+++.+..+..... ........+++.|.. .-.++.
T Consensus 10 ~v~~~~p-hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRYP-HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEEcC-CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCE
Confidence 4556664 54 3467899986 5555566654 4899999999999988864332 322222333444443 445677
Q ss_pred EEEeeeeccCCceeEEEECCCCccCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhh
Q psy467 166 VRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEEL 245 (845)
Q Consensus 166 I~I~~~~~~~~~~I~vWDl~tg~~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l 245 (845)
+.+ ||..+.+. +..+.....+
T Consensus 87 v~v-------------~D~~tl~~--------------------~~ti~~~~~G-------------------------- 107 (243)
T 3mbr_X 87 GFV-------------YDLATLTP--------------------RARFRYPGEG-------------------------- 107 (243)
T ss_dssp EEE-------------EETTTTEE--------------------EEEEECSSCC--------------------------
T ss_pred EEE-------------EECCcCcE--------------------EEEEeCCCCc--------------------------
Confidence 777 99998887 5555432222
Q ss_pred hhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEECCCCeEEEEecCCC---
Q psy467 246 FATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNS--- 322 (845)
Q Consensus 246 ~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWDl~s~~~l~tl~gh~--- 322 (845)
+.++ +++. .|+++..++.|.++|..+.+.+.++.-..
T Consensus 108 ---------wglt--~dg~-----------------------------~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~ 147 (243)
T 3mbr_X 108 ---------WALT--SDDS-----------------------------HLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGR 147 (243)
T ss_dssp ---------CEEE--ECSS-----------------------------CEEEECSSSEEEEECTTTCCEEEEEECEETTE
T ss_pred ---------eEEe--eCCC-----------------------------EEEEECCCCeEEEEeCCCCeEEEEEEEccCCc
Confidence 2232 2333 34444558899999999999888876421
Q ss_pred --CCEEEEEEeCCCCEEEEEe-CCC-EEEEEecCCceEEEecCC-------------CCCeEEEEEc-CCceEEEEEEEE
Q psy467 323 --STIRRLTFSEGGECLLGGD-TEG-LKVYGWEPARQYDAQPMG-------------WGKVQDLAVT-GTQLWFRRVGTW 384 (845)
Q Consensus 323 --~~VtslafSpdG~~Lasgs-~DG-I~IWDl~tgk~l~tl~~h-------------~~~VtsVafS-dg~lLaaSVsiW 384 (845)
..++.+.|. +|+ |.+.. .+. |.+.|..+++.+..+... ....++||++ +++.|.++-..|
T Consensus 148 ~~~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w 225 (243)
T 3mbr_X 148 PLDNLNELEWV-NGE-LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW 225 (243)
T ss_dssp ECCCEEEEEEE-TTE-EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC
T ss_pred ccccceeeEEe-CCE-EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC
Confidence 346677776 665 44444 344 999999999988776522 1357899999 555555553333
No 272
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.01 E-value=0.00064 Score=82.35 Aligned_cols=140 Identities=11% Similarity=0.050 Sum_probs=89.0
Q ss_pred cEEEEEEe-cCCCCEEEEEeC-CC----eEEEEECCCC-eeEE-EecCCCCCeEEEEEcCCCCEEEEEECC-----CcEE
Q psy467 17 SVNCLALG-KKSGQVLATGGD-DK----KVNLWALGKS-NCIM-SLSGHSTPVESVQFGNGEETLSAGCQS-----GSIK 83 (845)
Q Consensus 17 ~V~~LafS-p~dg~~LaTgs~-DG----~I~IWdl~t~-~~i~-~l~~h~~~V~sLafSpdg~~LaSgs~D-----GtV~ 83 (845)
.+...+|| | +|++||.+.. +| .|+++|+.++ +.+. .+. .....++|+|||+.|+....+ ..|.
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 68889999 9 8998886543 22 5999999988 6321 111 113467899999988877665 3688
Q ss_pred EEECCCCc--EEEEEc-CCCCCeEEEEEccCCCEEEEEEC---CCeEEEEECCCCc-eE--EEEc-CCCCCeEEEEEecC
Q psy467 84 IWNLAVPT--VQRTLN-GHKSSITSVDFHPYGDYLCSGSL---DSFIKLWDLRRKG-CI--YTYR-GHSKSINSIRFSPD 153 (845)
Q Consensus 84 VWDl~tg~--~v~~l~-~h~~~V~~lafspdg~~Lasgs~---DG~I~IWDl~t~~-~l--~~~~-~h~~~V~sLafSPd 153 (845)
++++.++. ....+. ........+.|+|||++|+..+. ...|.++|+.++. .. ..+. .......++.|+.
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~- 329 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG- 329 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-
T ss_pred EEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-
Confidence 88988764 223332 22344667899999998877653 3468889997652 22 3333 2334455555543
Q ss_pred CCEEEEEe
Q psy467 154 GQWIASGG 161 (845)
Q Consensus 154 g~~Lasgs 161 (845)
|..|+..+
T Consensus 330 g~~l~~~t 337 (751)
T 2xe4_A 330 TSHLVILT 337 (751)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEe
Confidence 55444433
No 273
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.92 E-value=0.0057 Score=66.92 Aligned_cols=153 Identities=12% Similarity=0.011 Sum_probs=100.3
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEE-EEECCCcEEEEECCCCcEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS-AGCQSGSIKIWNLAVPTVQ 93 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~La-Sgs~DGtV~VWDl~tg~~v 93 (845)
...+.+++|++.++.++++-...+.|..++.........+.........+++.+.+..|+ +-...+.|.+.+++.....
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence 345789999984555666666778999999876654444443334567899998655554 4445678999998755444
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEEEE-CC-CeEEEEECCCCceEEEE-cCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCSGS-LD-SFIKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGG-EDGVVRI 168 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Lasgs-~D-G~I~IWDl~t~~~l~~~-~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I 168 (845)
..+.........++++|.+..|+.+. .. +.|..+++... ....+ ...-.....++++|++..|+.+. ..+.|..
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~ 229 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 229 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEE
Confidence 44443445678999999766666554 34 67888888643 33333 22334578999998777666554 3455666
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.91 E-value=0.0026 Score=71.82 Aligned_cols=148 Identities=11% Similarity=0.124 Sum_probs=93.6
Q ss_pred cEEEEEEec-CCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC-C----cEEEEECCCC
Q psy467 17 SVNCLALGK-KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS-G----SIKIWNLAVP 90 (845)
Q Consensus 17 ~V~~LafSp-~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D-G----tV~VWDl~tg 90 (845)
....|+++| +++. |+++...+.|+.+|..++...... ........++|++++++|+++... + .+.+.+. .+
T Consensus 138 ~P~~lavdp~~~g~-Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNH-LYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEEEE-EEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCCCe-EEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 457899997 2455 444444478999998776644433 355678999999999966666542 2 2333443 33
Q ss_pred cEE--EEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEEcC-CCCCeEEEEEecCCCEEEEEe-CCCc
Q psy467 91 TVQ--RTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-HSKSINSIRFSPDGQWIASGG-EDGV 165 (845)
Q Consensus 91 ~~v--~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-h~~~V~sLafSPdg~~Lasgs-~DG~ 165 (845)
... ..+. .......++++| ++..+++-..++.|..++...+........ .......++|+|+|++|+.+. ..+.
T Consensus 215 ~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 215 GFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp TSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred ceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 221 2222 123356788999 666555555778999999986654222221 224578899999999655554 5567
Q ss_pred EEE
Q psy467 166 VRI 168 (845)
Q Consensus 166 I~I 168 (845)
|..
T Consensus 294 I~~ 296 (430)
T 3tc9_A 294 ILR 296 (430)
T ss_dssp EEE
T ss_pred EEE
Confidence 777
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.89 E-value=0.0048 Score=68.47 Aligned_cols=155 Identities=12% Similarity=0.025 Sum_probs=101.4
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEE-EECCCcEEEEECCCCcE
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA-GCQSGSIKIWNLAVPTV 92 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaS-gs~DGtV~VWDl~tg~~ 92 (845)
....+..++|++.++.++++-...+.|..++.........+.........+++.+.+..|+. -...+.|.+.+++....
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 193 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence 34567889999845666666667789999998766544444433345678899986555544 44467888888875544
Q ss_pred EEEEcCCCCCeEEEEEccCCCEEEEEEC-C-CeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy467 93 QRTLNGHKSSITSVDFHPYGDYLCSGSL-D-SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRI 168 (845)
Q Consensus 93 v~~l~~h~~~V~~lafspdg~~Lasgs~-D-G~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I 168 (845)
...+.........+++.|.+..|+.+.. . +.|..+++............-.....|+|+|++..|+.+. ..+.|..
T Consensus 194 ~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~ 272 (386)
T 3v65_B 194 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 272 (386)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEE
Confidence 4444434456789999997776666553 3 6788888864333333333344578999998776666554 3455666
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.85 E-value=0.005 Score=69.57 Aligned_cols=149 Identities=11% Similarity=0.074 Sum_probs=90.5
Q ss_pred cEEEEEEecC-CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCC----c-EEEEECCCC
Q psy467 17 SVNCLALGKK-SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG----S-IKIWNLAVP 90 (845)
Q Consensus 17 ~V~~LafSp~-dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DG----t-V~VWDl~tg 90 (845)
.-.+|+|+|+ +...|+.+...+.|+.++..++..... .........++|+++|+ |+.+...+ . +...+...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 4678999983 233455554448899999877765544 33556789999999999 44444321 1 333333222
Q ss_pred cE-EEEEcCCCCCeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEE-cC-CCCCeEEEEEecCCCEEEEEe-CCCc
Q psy467 91 TV-QRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTY-RG-HSKSINSIRFSPDGQWIASGG-EDGV 165 (845)
Q Consensus 91 ~~-v~~l~~h~~~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~-~~-h~~~V~sLafSPdg~~Lasgs-~DG~ 165 (845)
.. ...+. .......++++| ++.++++-..++.|+.+|..++.....+ .. .......++|+|++++|+.+. ..+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 11 11222 223456788999 6665555556788999998877653322 21 122335799999999665554 4566
Q ss_pred EEE
Q psy467 166 VRI 168 (845)
Q Consensus 166 I~I 168 (845)
|..
T Consensus 297 I~~ 299 (433)
T 4hw6_A 297 IYR 299 (433)
T ss_dssp EEE
T ss_pred EEE
Confidence 777
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.85 E-value=0.018 Score=61.74 Aligned_cols=154 Identities=10% Similarity=0.021 Sum_probs=98.6
Q ss_pred CCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCC----CeeEEEecCCCCCeEEEEEcCCCCEEE-EEECCCcEEEEECC
Q psy467 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGK----SNCIMSLSGHSTPVESVQFGNGEETLS-AGCQSGSIKIWNLA 88 (845)
Q Consensus 14 H~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t----~~~i~~l~~h~~~V~sLafSpdg~~La-Sgs~DGtV~VWDl~ 88 (845)
.-....+++|++.++.++++-..++.|..++... ......+.........+++.+.+..|+ +-...+.|.+.+++
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 3456789999984455566666678999999875 222222332334568899987555554 44557899999987
Q ss_pred CCcEEEEEcCCCCCeEEEEEccCCCEEEEEECC--CeEEEEECCCCceEEEE-cCCCCCeEEEEEecCCCEEEEEe-CCC
Q psy467 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD--SFIKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGG-EDG 164 (845)
Q Consensus 89 tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~D--G~I~IWDl~t~~~l~~~-~~h~~~V~sLafSPdg~~Lasgs-~DG 164 (845)
.......+.........++++|.+..|+.+... +.|...++. +.....+ ...-.....+++++++..|+.+. ..+
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~ 186 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 186 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCC
Confidence 554433343334567899999977766666543 688888875 3333333 22345678999999877766655 445
Q ss_pred cEEE
Q psy467 165 VVRI 168 (845)
Q Consensus 165 ~I~I 168 (845)
.|..
T Consensus 187 ~I~~ 190 (316)
T 1ijq_A 187 SISS 190 (316)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6777
No 278
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.85 E-value=0.02 Score=63.76 Aligned_cols=157 Identities=8% Similarity=-0.010 Sum_probs=103.5
Q ss_pred ccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC----eeEEEecCCCCCeEEEEEcCCCCEEE-EEECCCcEEEEE
Q psy467 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS----NCIMSLSGHSTPVESVQFGNGEETLS-AGCQSGSIKIWN 86 (845)
Q Consensus 12 ~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~----~~i~~l~~h~~~V~sLafSpdg~~La-Sgs~DGtV~VWD 86 (845)
......+.+|+|++.++.++++-...+.|..+++... .....+.........+++.+.+..|+ +-...+.|.+.+
T Consensus 108 ~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~ 187 (400)
T 3p5b_L 108 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 187 (400)
T ss_dssp ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEe
Confidence 3445678999999855555556566788999988652 23333443455788999998555554 444578899999
Q ss_pred CCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-C
Q psy467 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE-D 163 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~-D 163 (845)
++.......+.........|++.|.+.+|+.... .+.|...++............-.....|++++++..|+.+.. .
T Consensus 188 ~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 188 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp TTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCC
Confidence 9866554445434455789999997777766653 367888888644333333333456789999988777766653 4
Q ss_pred CcEEE
Q psy467 164 GVVRI 168 (845)
Q Consensus 164 G~I~I 168 (845)
+.|..
T Consensus 268 ~~I~~ 272 (400)
T 3p5b_L 268 HSISS 272 (400)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 56666
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.81 E-value=0.011 Score=63.97 Aligned_cols=137 Identities=11% Similarity=0.037 Sum_probs=82.4
Q ss_pred EEEEEeCCCeEEEEECCCCe--eEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcE-EEEEcCCCCCeEE
Q psy467 30 VLATGGDDKKVNLWALGKSN--CIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTV-QRTLNGHKSSITS 105 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~--~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~-v~~l~~h~~~V~~ 105 (845)
+|+.+. ...|+.+++.... ....+. ....+..++|++.+..|.... ..+.|..+++..+.. ...+...-.....
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g 83 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG 83 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence 344443 3579999987653 222222 223567899998666555554 467899999876532 1222222234568
Q ss_pred EEEccCCCEEE-EEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC--CCcEEE
Q psy467 106 VDFHPYGDYLC-SGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE--DGVVRI 168 (845)
Q Consensus 106 lafspdg~~La-sgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~--DG~I~I 168 (845)
+++.+.+..|+ +-...+.|.++++............-.....++++|.+..|+.+.. .+.|..
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r 149 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIER 149 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEE
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEE
Confidence 88987555554 4446678999998754333333344556789999987666655542 345555
No 280
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.79 E-value=0.00087 Score=81.20 Aligned_cols=100 Identities=12% Similarity=0.114 Sum_probs=68.7
Q ss_pred CeEEEEEc-CCCCEEEEEEC-CC----cEEEEECCCC-cEEE-EEcCCCCCeEEEEEccCCCEEEEEECC-----CeEEE
Q psy467 60 PVESVQFG-NGEETLSAGCQ-SG----SIKIWNLAVP-TVQR-TLNGHKSSITSVDFHPYGDYLCSGSLD-----SFIKL 126 (845)
Q Consensus 60 ~V~sLafS-pdg~~LaSgs~-DG----tV~VWDl~tg-~~v~-~l~~h~~~V~~lafspdg~~Lasgs~D-----G~I~I 126 (845)
.+...+|| |||++||.+.. +| +|+++|+.++ +.+. .+. .....++|+|||+.|+....+ ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 99999886543 22 4999999988 6321 111 113467899999888777655 36888
Q ss_pred EECCCCce--EEEEc-CCCCCeEEEEEecCCCEEEEEeC
Q psy467 127 WDLRRKGC--IYTYR-GHSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 127 WDl~t~~~--l~~~~-~h~~~V~sLafSPdg~~Lasgs~ 162 (845)
+++.++.. ...+. ........+.|+|||++|+..+.
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~ 290 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQ 290 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEE
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEec
Confidence 89877642 22232 22334667899999999887653
No 281
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.71 E-value=0.0082 Score=62.97 Aligned_cols=116 Identities=11% Similarity=0.136 Sum_probs=83.7
Q ss_pred EEecCCCCCeEEEEEcCCCCEEE-EEECCCcEEEEECCCCcEEEEEcC-CCCCeEEEEEccCCCEEEEEECCCeEEEEEC
Q psy467 52 MSLSGHSTPVESVQFGNGEETLS-AGCQSGSIKIWNLAVPTVQRTLNG-HKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129 (845)
Q Consensus 52 ~~l~~h~~~V~sLafSpdg~~La-Sgs~DGtV~VWDl~tg~~v~~l~~-h~~~V~~lafspdg~~Lasgs~DG~I~IWDl 129 (845)
+.+.+-...+..++|+|+++.|+ +...++.|...|.. ++.++.+.. .......|++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 34556667899999999876555 46678889999998 888887742 2356889999988877676667788999988
Q ss_pred CCCce---EEEEc------CCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 130 RRKGC---IYTYR------GHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 130 ~t~~~---l~~~~------~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
..... +.... ..+.....++|+|+++.|+++.+.....+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i 146 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEV 146 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceE
Confidence 65442 22221 13445689999999888777776655555
No 282
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.67 E-value=0.18 Score=59.56 Aligned_cols=336 Identities=8% Similarity=-0.058 Sum_probs=167.0
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC--CCcEEEEECCCCcEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ--SGSIKIWNLAVPTVQ 93 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~--DGtV~VWDl~tg~~v 93 (845)
.....|++.+.+++++++-...+.|.+.+.+.......+...-.....|++.|.+.+|+.... .+.|...+++.....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 567899998845556666667789999998754433333344556789999997666666653 356777777643333
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEEeeee
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I~~~~ 172 (845)
......-.....|++++++..|+.+. ..+.|...|+............-....+|++..+ ..+++-...+.|..
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~---- 238 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILA---- 238 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEE----
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEE----
Confidence 33333345578999999877776665 4567888888643322222212223345666544 33333334556666
Q ss_pred ccCCceeEEEECCCCccCCCCCC--CCCcceeec-CC----C-----------CeEEEEecCCCCCccceeeEeeecccc
Q psy467 173 HLTNTSIHVVDLSLVHPLGTPPP--QYTSSVPFS-HN----T-----------SLRKSFTKGRPGGTKAKIDVTRIEENA 234 (845)
Q Consensus 173 ~~~~~~I~vWDl~tg~~l~~~~~--~~i~svs~s-pd----g-----------~~l~~~~~h~~~~~~~~i~V~~i~~~~ 234 (845)
.|..+++....+.. .....+.+. +. + ..+......... .......-..
T Consensus 239 ---------~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~-----~~C~C~~g~~ 304 (619)
T 3s94_A 239 ---------CNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPF-----YQCACPTGVK 304 (619)
T ss_dssp ---------EESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTS-----EEEECCTTCC
T ss_pred ---------EECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCC-----ceEeCCchhe
Confidence 77766654322221 111222211 10 0 001110000000 0000000000
Q ss_pred cccc----cccchhhhhhccCCCceeEEEcCCCCcCCCCccc--ccccCceeEEEcCCCCcccceEEEEEeCCCeEEEEE
Q psy467 235 ESED----QAGEEELFATIANPCDYSAIFQPHRSLNRSGTCV--PVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWD 308 (845)
Q Consensus 235 ~~~~----~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~--~~~~~I~slafSPdg~~~~~~lLatgs~DG~I~IWD 308 (845)
...+ ..+....+..........+.+.+... ..... .....+.+++|.+.+.. ++++-...+.|+.++
T Consensus 305 l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~---~~~~~~~~~l~~~~~ld~d~~~~~----ly~sD~~~~~I~r~~ 377 (619)
T 3s94_A 305 LLENGKTCKDGATELLLLARRTDLRRISLDTPDF---TDIVLQLEDIRHAIAIDYDPVEGY----IYWTDDEVRAIRRSF 377 (619)
T ss_dssp BCTTSSCBCSSCSEEEEEEESSCEEEEESSSTTC---CCEECCCSCCSSEEEEEEETTTTE----EEEEETTTTEEEEEE
T ss_pred ecccCcccCCCCceEEEEEcccceEEEecCCCcc---ceeEEeccccCccEEEEEEcCCCe----EEEEeCCCCeEEEEE
Confidence 0000 00000000000001111111111110 00011 11234567888885441 555555678899998
Q ss_pred CCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCC-C-EEEEEecCCceEEEe-cCCCCCeEEEEEc-CCceEE
Q psy467 309 LEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-G-LKVYGWEPARQYDAQ-PMGWGKVQDLAVT-GTQLWF 378 (845)
Q Consensus 309 l~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~D-G-I~IWDl~tgk~l~tl-~~h~~~VtsVafS-dg~lLa 378 (845)
+........+...-.....++++..+..|+.+... + |.+.+++... ...+ ...-...+++++. ....|.
T Consensus 378 ~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P~~iavdp~~G~ly 450 (619)
T 3s94_A 378 IDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-RKILISEDLEEPRAIVLDPMVGYMY 450 (619)
T ss_dssp TTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCCSEEEEEEETTTTEEE
T ss_pred cCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe-EEEEEECCCCCeeeEEEEcCCCcEE
Confidence 87644333333333467889999866666666554 4 9888887543 3333 3344678999999 434444
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.66 E-value=0.027 Score=68.43 Aligned_cols=137 Identities=9% Similarity=0.001 Sum_probs=85.6
Q ss_pred EEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCC----cEEEEEcCCCCCeE
Q psy467 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVP----TVQRTLNGHKSSIT 104 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg----~~v~~l~~h~~~V~ 104 (845)
+|+.+. ...|+..++........+. ....+..|+|++.+..|+... ..+.|..+++... .....+........
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred cccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 444443 3468888887655444444 456688999998666665554 4678988998753 22334443445567
Q ss_pred EEEEccCCCEEEEE-ECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCC--CcEEE
Q psy467 105 SVDFHPYGDYLCSG-SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED--GVVRI 168 (845)
Q Consensus 105 ~lafspdg~~Lasg-s~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~D--G~I~I 168 (845)
.|++.+.++.|+.+ ...+.|.+.++........+...-.....|+++|.+.+|+..... +.|..
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~ 541 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK 541 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEE
Confidence 89998877666555 456789999987544433333344568899999976666655432 44555
No 284
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.66 E-value=0.19 Score=59.35 Aligned_cols=154 Identities=7% Similarity=-0.002 Sum_probs=97.5
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee-EEEecCCCCCeEEEEEcCCCCEEEEE-ECCCcEEEEECCCCcE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC-IMSLSGHSTPVESVQFGNGEETLSAG-CQSGSIKIWNLAVPTV 92 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~-i~~l~~h~~~V~sLafSpdg~~LaSg-s~DGtV~VWDl~tg~~ 92 (845)
-....+|+|++.++.++++-...+.|..+++..... ...+...-.....+++.+.+..|+.+ ...+.|.+.+++....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 446789999984555555555567899999865432 23333333578999999966655555 4578999999985543
Q ss_pred EEEEcCCCCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy467 93 QRTLNGHKSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRI 168 (845)
Q Consensus 93 v~~l~~h~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I 168 (845)
...+...-.....|++.|.+.+|+.+.. .+.|...++............-.....|+++++++.|+.+. ..+.|..
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~ 197 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 197 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEE
Confidence 3333334445678999998767766653 35777777753333333333445678999999776666554 4456666
No 285
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.64 E-value=0.011 Score=67.71 Aligned_cols=151 Identities=14% Similarity=0.139 Sum_probs=94.2
Q ss_pred cEEEEEEecC-CCCEEEEEeCCCeEEEEECCCCeeEEEecCC---CCCeEEEEE-------cCCCCEEEEEECCC-----
Q psy467 17 SVNCLALGKK-SGQVLATGGDDKKVNLWALGKSNCIMSLSGH---STPVESVQF-------GNGEETLSAGCQSG----- 80 (845)
Q Consensus 17 ~V~~LafSp~-dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h---~~~V~sLaf-------Spdg~~LaSgs~DG----- 80 (845)
.-..|+|+|. .++++++....+.|++.|.+++......... ......|+| ++++++|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 3568999983 4555555555567999998877665544322 235899999 99999777766554
Q ss_pred --cEEEEECCC-CcEE-----EEEcCCCCCeEEEEEccCCCE-EEEEECCCeEEEEECC-------CCce----------
Q psy467 81 --SIKIWNLAV-PTVQ-----RTLNGHKSSITSVDFHPYGDY-LCSGSLDSFIKLWDLR-------RKGC---------- 134 (845)
Q Consensus 81 --tV~VWDl~t-g~~v-----~~l~~h~~~V~~lafspdg~~-Lasgs~DG~I~IWDl~-------t~~~---------- 134 (845)
.|.+.+... +... ..+... .....++++|++.. +++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665443 2211 122211 23457789995544 5555577889999987 4543
Q ss_pred -EEE-Ec-CCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy467 135 -IYT-YR-GHSKSINSIRFSPDGQWIASGG-EDGVVRI 168 (845)
Q Consensus 135 -l~~-~~-~h~~~V~sLafSPdg~~Lasgs-~DG~I~I 168 (845)
... +. ........++|+|+|++|+.+. ..+.|+.
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~k 336 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMR 336 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEE
Confidence 112 22 2234467899999999655554 4556666
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.55 E-value=0.025 Score=61.00 Aligned_cols=152 Identities=7% Similarity=0.019 Sum_probs=98.1
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee-EEEecCCCCCeEEEEEcCCCCEEE-EEECCCcEEEEECCCCcEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC-IMSLSGHSTPVESVQFGNGEETLS-AGCQSGSIKIWNLAVPTVQR 94 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~-i~~l~~h~~~V~sLafSpdg~~La-Sgs~DGtV~VWDl~tg~~v~ 94 (845)
.+.+++|++.++.++++-...+.|..++...... ...+...-.....+++.+.+..|+ +-...+.|.+++++......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 4678999885566666666778999999876532 122222234567899987555554 44456889999987544333
Q ss_pred EEcCCCCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEEE
Q psy467 95 TLNGHKSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVRI 168 (845)
Q Consensus 95 ~l~~h~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~I 168 (845)
.+.........+++.|.+..|+.+.. .+.|...++............-.....+++++++..|+.+. ..+.|..
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence 34344456789999997777766663 57888888763322222223334578999999777666654 4456666
No 287
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.42 E-value=0.023 Score=62.20 Aligned_cols=196 Identities=11% Similarity=0.223 Sum_probs=120.5
Q ss_pred CCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccC----CC---EEEEEE-C--CCeEEEEECC-CCceEEE
Q psy467 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPY----GD---YLCSGS-L--DSFIKLWDLR-RKGCIYT 137 (845)
Q Consensus 69 dg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspd----g~---~Lasgs-~--DG~I~IWDl~-t~~~l~~ 137 (845)
....++.....+-+.+||+ +|+.+..+.. +.++.+..-|+ |+ ++++.. . +++|.+|++. ....+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 4456666677889999999 7999988863 56777777663 22 233333 3 5789999773 2223554
Q ss_pred EcC------CC-CCeEEEEE--ecC-CC-EEEEEeCCCcEEEeeeeccCCceeEEEECCC---CccCCCCCCCCCcceee
Q psy467 138 YRG------HS-KSINSIRF--SPD-GQ-WIASGGEDGVVRIGASFHLTNTSIHVVDLSL---VHPLGTPPPQYTSSVPF 203 (845)
Q Consensus 138 ~~~------h~-~~V~sLaf--SPd-g~-~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~t---g~~l~~~~~~~i~svs~ 203 (845)
+.. .. ..+..+++ +|. +. ++++...+|.+.. |++.. +..
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q-------------~~l~~~~~g~~-------------- 168 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQ-------------YELKADKNGYI-------------- 168 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEE-------------EEEEECTTSCE--------------
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEE-------------EEEEeCCCCcc--------------
Confidence 421 11 45666777 664 44 6777888888888 77632 211
Q ss_pred cCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCCCcccccccCceeEEE
Q psy467 204 SHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSI 283 (845)
Q Consensus 204 spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~~~~~~~~~~I~slaf 283 (845)
.++.+..+..... + ..+...+...
T Consensus 169 --~~~lVR~f~lgsq--------~---------------------------EgcvvDd~~g------------------- 192 (355)
T 3amr_A 169 --SGKKVRAFKMNSQ--------T---------------------------EGMAADDEYG------------------- 192 (355)
T ss_dssp --EEEEEEEEECSSC--------E---------------------------EEEEEETTTT-------------------
T ss_pred --cceEEEEecCCCC--------c---------------------------ceEEEcCCCC-------------------
Confidence 0111222221111 1 3344444433
Q ss_pred cCCCCcccceEEEEEeCCCeEEEEECC-----CCeEEEEec-CC-CCCEEEEEE--eCCCC-EEEEEeC-CC-EEEEEec
Q psy467 284 LPQSPMLCFILTTSSSADRTVNFWDLE-----KFSLVSTTE-KN-SSTIRRLTF--SEGGE-CLLGGDT-EG-LKVYGWE 351 (845)
Q Consensus 284 SPdg~~~~~~lLatgs~DG~I~IWDl~-----s~~~l~tl~-gh-~~~Vtslaf--SpdG~-~Lasgs~-DG-I~IWDl~ 351 (845)
.|..+-.+.-|..||.+ +++.+..+. ++ ...+..|++ .++|+ +|++++. +. +.+||.+
T Consensus 193 ----------~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 193 ----------RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ----------EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred ----------eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 78888888778888865 456666653 22 236888888 45666 7777664 44 9999997
Q ss_pred -CCceEEEec
Q psy467 352 -PARQYDAQP 360 (845)
Q Consensus 352 -tgk~l~tl~ 360 (845)
+.+.+..+.
T Consensus 263 ~~~~~vg~f~ 272 (355)
T 3amr_A 263 GKNKYVADFR 272 (355)
T ss_dssp TTCCEEEEEE
T ss_pred CCCcEEEEEE
Confidence 667777764
No 288
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.37 E-value=0.17 Score=54.77 Aligned_cols=120 Identities=12% Similarity=0.195 Sum_probs=84.3
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC-CcEEEEEcC
Q psy467 20 CLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV-PTVQRTLNG 98 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t-g~~v~~l~~ 98 (845)
+.-.+| ....+|.-. ..+++|+|+++...++...- ...|.-=.|-.+ +.|+..+ +..|.-|+++. ..+++.+..
T Consensus 71 sAIMnP-~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~-~~L~lVT-~taVyHWs~~~~s~P~kvFdR 145 (365)
T 2xzh_A 71 SAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDR 145 (365)
T ss_dssp EEEECS-SSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSS-SEEEEEE-SSEEEEEESSTTCCCEEEEEC
T ss_pred eeeeCC-CccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCC-CeEEEEc-CCcEEEEcccCCCCCceeeec
Confidence 345577 778888765 56899999999999888874 457777777654 4555553 67899999974 356666654
Q ss_pred C----CCCeEEEEEccCCCEEEEEE-------CCCeEEEEECCCCceEEEEcCCCCCe
Q psy467 99 H----KSSITSVDFHPYGDYLCSGS-------LDSFIKLWDLRRKGCIYTYRGHSKSI 145 (845)
Q Consensus 99 h----~~~V~~lafspdg~~Lasgs-------~DG~I~IWDl~t~~~l~~~~~h~~~V 145 (845)
| ...|..-..+++.++++..+ -.|.+.+|..+. +.-+.+.+|....
T Consensus 146 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F 202 (365)
T 2xzh_A 146 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASF 202 (365)
T ss_dssp CGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEE
T ss_pred chhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeee
Confidence 4 34566777788888876544 236789999874 4556677775544
No 289
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.37 E-value=0.28 Score=57.98 Aligned_cols=132 Identities=8% Similarity=0.008 Sum_probs=85.0
Q ss_pred CEEEEEeCCCeEEEEECCCCeeEEEec-CCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcEEEEEcCCCCCeEEE
Q psy467 29 QVLATGGDDKKVNLWALGKSNCIMSLS-GHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTVQRTLNGHKSSITSV 106 (845)
Q Consensus 29 ~~LaTgs~DG~I~IWdl~t~~~i~~l~-~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~v~~l~~h~~~V~~l 106 (845)
.+|+.+ ..+.|+..++++......+. ..-..+..|+|++.+..|+.+. .++.|..++++.......+.........+
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM 85 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred cEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence 345554 34689999997655433332 1234688999999777766554 47889999987654444444333456788
Q ss_pred EEccCCCEEEEE-ECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe
Q psy467 107 DFHPYGDYLCSG-SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 107 afspdg~~Lasg-s~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs 161 (845)
++.+.+..|+.+ ...+.|.+.++........+...-.....|+++|...+|+...
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD 141 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTE 141 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeC
Confidence 998766656554 4567899999865433333333445678999998655555544
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.36 E-value=0.1 Score=63.44 Aligned_cols=158 Identities=8% Similarity=-0.017 Sum_probs=102.8
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCC----eeEEEecCCCCCeEEEEEcCCCCEEEEE-ECCCcEEEE
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS----NCIMSLSGHSTPVESVQFGNGEETLSAG-CQSGSIKIW 85 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~----~~i~~l~~h~~~V~sLafSpdg~~LaSg-s~DGtV~VW 85 (845)
+......+.+|+|++.++.++++-...+.|+.+++... .....+.........|++.+.+..|+.+ ...+.|.+.
T Consensus 419 l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~ 498 (791)
T 3m0c_C 419 LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVA 498 (791)
T ss_dssp EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEE
Confidence 33345668899999855556666666788999988652 2233344344567789999877655555 447889999
Q ss_pred ECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-
Q psy467 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE- 162 (845)
Q Consensus 86 Dl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~- 162 (845)
+++.......+.........|++.|.+.+|+.+.. .+.|...++........+...-.....|++++.+..|+.+..
T Consensus 499 ~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 499 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp ETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred eCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCC
Confidence 99855544444434456789999998777776653 267888888644433333333456889999987776666543
Q ss_pred CCcEEE
Q psy467 163 DGVVRI 168 (845)
Q Consensus 163 DG~I~I 168 (845)
.+.|..
T Consensus 579 ~~~I~~ 584 (791)
T 3m0c_C 579 LHSISS 584 (791)
T ss_dssp TTEEEE
T ss_pred CCcEEE
Confidence 345655
No 291
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.34 E-value=0.077 Score=57.91 Aligned_cols=101 Identities=17% Similarity=0.183 Sum_probs=62.5
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcE--EEEEc---CCCCCeEEEEEccC---CCEEEEEEC-C-----Ce
Q psy467 58 STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTV--QRTLN---GHKSSITSVDFHPY---GDYLCSGSL-D-----SF 123 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~--v~~l~---~h~~~V~~lafspd---g~~Lasgs~-D-----G~ 123 (845)
-.....++|.|+|+++++ ..+|.|.+++ +++. +..+. ........|+|+|+ +..|+++.. . +.
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 345789999999985555 5679999998 4442 22221 12346789999998 556655443 2 57
Q ss_pred EEEEECCCCc-----eE-EEEc---CCCCCeEEEEEecCCCEEEEEe
Q psy467 124 IKLWDLRRKG-----CI-YTYR---GHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 124 I~IWDl~t~~-----~l-~~~~---~h~~~V~sLafSPdg~~Lasgs 161 (845)
|..|+...+. .+ ..+. ........++|.|||.+.++.+
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 8888876432 11 1132 1112346789999987655543
No 292
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.33 E-value=0.046 Score=59.72 Aligned_cols=108 Identities=14% Similarity=0.091 Sum_probs=66.7
Q ss_pred eeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee--EEEec---CCCCCeEEEEEcCC---CCEEEEEEC
Q psy467 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC--IMSLS---GHSTPVESVQFGNG---EETLSAGCQ 78 (845)
Q Consensus 7 ~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~--i~~l~---~h~~~V~sLafSpd---g~~LaSgs~ 78 (845)
++..+...-..-.+|+|.| +|++++ +..+|.|.+++ +++. +..+. ........|+|+|+ +..|..+..
T Consensus 22 ~~~~va~~l~~P~~ia~~p-dG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 22 RVEEVVGGLEVPWALAFLP-DGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp CEEEEECCCSCEEEEEECT-TSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred EEEEEECCCCCceEEEEcC-CCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEe
Confidence 4445554455678999999 888555 45679999998 4432 22221 12456899999998 555554433
Q ss_pred -C-----CcEEEEECCCCc-----EE-EEEc---CCCCCeEEEEEccCCCEEEEE
Q psy467 79 -S-----GSIKIWNLAVPT-----VQ-RTLN---GHKSSITSVDFHPYGDYLCSG 118 (845)
Q Consensus 79 -D-----GtV~VWDl~tg~-----~v-~~l~---~h~~~V~~lafspdg~~Lasg 118 (845)
. +.|..|+...+. .+ ..+. ........++|.|||.+.++.
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 2 678888877542 11 2233 111234689999999766554
No 293
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.27 E-value=0.4 Score=60.71 Aligned_cols=114 Identities=9% Similarity=-0.012 Sum_probs=73.7
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeE--EEecCCCCCeEEEEEcCC------CCEEEEEEC-CCcEEEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI--MSLSGHSTPVESVQFGNG------EETLSAGCQ-SGSIKIWN 86 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i--~~l~~h~~~V~sLafSpd------g~~LaSgs~-DGtV~VWD 86 (845)
..|.+.+.+ +.+++.+. .+.+.++.+.+++.. .... -...|.|+++.+. +++++.|.. |++|+|++
T Consensus 514 ~~I~~As~n---~~~vvva~-g~~l~~fel~~~~L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~s 588 (1158)
T 3ei3_A 514 KNISVASCN---SSQVVVAV-GRALYYLQIHPQELRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 588 (1158)
T ss_dssp CCCCEEEEC---SSEEEEEE-TTEEEEEEEETTEEEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEE
T ss_pred CEEEEEEeC---CCEEEEEE-CCEEEEEEeeCCceeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEE
Confidence 356666654 35666665 578888887655432 2222 3568999999863 479999997 99999999
Q ss_pred CCCCcEEEEEcC-CCCCeEEEEEcc--CCCEEEEEECCCeEEEEEC--CCCce
Q psy467 87 LAVPTVQRTLNG-HKSSITSVDFHP--YGDYLCSGSLDSFIKLWDL--RRKGC 134 (845)
Q Consensus 87 l~tg~~v~~l~~-h~~~V~~lafsp--dg~~Lasgs~DG~I~IWDl--~t~~~ 134 (845)
+.+.+.+....- ......++.+.. ...+|..|-.||.+..+.+ .++..
T Consensus 589 L~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l 641 (1158)
T 3ei3_A 589 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLL 641 (1158)
T ss_dssp TTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCE
T ss_pred CCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCcc
Confidence 998776654332 112334444332 3357889999998866655 34443
No 294
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.22 E-value=0.11 Score=58.41 Aligned_cols=106 Identities=12% Similarity=0.091 Sum_probs=62.5
Q ss_pred CeEEEEEcCC--CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCC-----eEEEEECCCC
Q psy467 60 PVESVQFGNG--EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS-----FIKLWDLRRK 132 (845)
Q Consensus 60 ~V~sLafSpd--g~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG-----~I~IWDl~t~ 132 (845)
....++|+|+ +..|..+...+.|+.+|..++...... ........++|+++|+ |+++...+ .+...+...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 4678999984 455655544489999999877655443 3455688999999999 55554322 1333332211
Q ss_pred ce-EEEEcCCCCCeEEEEEec-CCCEEEEEeCCCcEEE
Q psy467 133 GC-IYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168 (845)
Q Consensus 133 ~~-l~~~~~h~~~V~sLafSP-dg~~Lasgs~DG~I~I 168 (845)
.. ...+. .-.....++++| +|.++++-..++.|+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~ 254 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISS 254 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEE
Confidence 11 01111 223456678888 5555545445566666
No 295
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.16 E-value=0.19 Score=53.91 Aligned_cols=145 Identities=12% Similarity=0.149 Sum_probs=82.8
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec---CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS---GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~---~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~ 91 (845)
...+.+|.|++ +..++ ++.++.|.. ..+.++.-.... .+...+..+.+.+++..++++ .+|.|.. ..+.|+
T Consensus 79 ~~~~~~i~~~~--~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~ 152 (327)
T 2xbg_A 79 DYRFNSVSFQG--NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGK 152 (327)
T ss_dssp CCEEEEEEEET--TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTS
T ss_pred CccEEEEEecC--CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCC
Confidence 45789999975 34444 455665543 333344333322 233567888887777666655 4564422 223343
Q ss_pred EEEE-EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEEC--CCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 92 VQRT-LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL--RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 92 ~v~~-l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl--~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.-.. .......+..+.+.+++.+++++...+..+-+|- .+.+.+. ......+..+.+.+++..+ .++.+|.++.
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~ 229 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAF 229 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEE
T ss_pred CCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEE
Confidence 3322 2345567899999999887766644333333442 2223331 2345678889999888755 4456777666
No 296
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.16 E-value=0.0042 Score=73.82 Aligned_cols=117 Identities=14% Similarity=0.129 Sum_probs=67.3
Q ss_pred cEEEEEEecCCCCEEEEEeC-CCeEEEEECCCCeeEEEecCCCC-CeEEEEEcCCCCEEEEEE-CC-----CcEEEEECC
Q psy467 17 SVNCLALGKKSGQVLATGGD-DKKVNLWALGKSNCIMSLSGHST-PVESVQFGNGEETLSAGC-QS-----GSIKIWNLA 88 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~-DG~I~IWdl~t~~~i~~l~~h~~-~V~sLafSpdg~~LaSgs-~D-----GtV~VWDl~ 88 (845)
...++++.. ++.++++|+. +..+.+||..+.+-...-..+.. .-.+++..++++.++.|+ .+ ..+.+||..
T Consensus 244 ~~~~~~~~~-~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 244 FCPGISMDG-NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp SSCEEEECT-TSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred ccccccCCC-CCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 344567777 8899999884 45899999876643322111111 123455667899999988 34 579999998
Q ss_pred CCcEEEEEcCC-----CCCeEEEEEccCCCEEEEEECCC---------eEEEEECCCCceE
Q psy467 89 VPTVQRTLNGH-----KSSITSVDFHPYGDYLCSGSLDS---------FIKLWDLRRKGCI 135 (845)
Q Consensus 89 tg~~v~~l~~h-----~~~V~~lafspdg~~Lasgs~DG---------~I~IWDl~t~~~l 135 (845)
+++... +... ...-....+..++..++.|+.+| .+..||..+....
T Consensus 323 t~~W~~-~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~ 382 (656)
T 1k3i_A 323 SKTWTS-LPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDV 382 (656)
T ss_dssp TTEEEE-ETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEE
T ss_pred CCccee-CCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCccee
Confidence 876433 2100 00000011223455555555443 5678888766543
No 297
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.15 E-value=0.02 Score=64.48 Aligned_cols=60 Identities=10% Similarity=0.105 Sum_probs=43.2
Q ss_pred CeEEEEEcc-CCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC
Q psy467 102 SITSVDFHP-YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 102 ~V~~lafsp-dg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~ 162 (845)
....++++| ++..|+++...+.|+.+|+..+.... +.........++|+++|++|+++..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~ 198 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITND 198 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEEC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeC
Confidence 346899998 46667777666889999998665443 3334556889999999996666554
No 298
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.14 E-value=0.27 Score=55.13 Aligned_cols=125 Identities=11% Similarity=0.203 Sum_probs=85.1
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC-CcEEEEEcC
Q psy467 20 CLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV-PTVQRTLNG 98 (845)
Q Consensus 20 ~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t-g~~v~~l~~ 98 (845)
+.-.+| ..+.+|.=. ..++.|+|+++...++...- ...|.-=.|-.+ +.|+.. .+..|.-|+++. ..+++.+..
T Consensus 70 sAIMnP-~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~-~~l~lV-T~taVyHWsi~~~s~P~kvFdR 144 (494)
T 1bpo_A 70 SAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALV-TDNAVYHWSMEGESQPVKMFDR 144 (494)
T ss_dssp EEEECS-SSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEET-TEEEEE-CSSEEEEEESSSSCCCEEEEEC
T ss_pred eeeeCC-CCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCC-CeEEEE-cCCeeEEecccCCCCchhheec
Confidence 345567 667777665 56999999999999888874 445666677643 455555 467899999974 356666654
Q ss_pred C----CCCeEEEEEccCCCEEEEEE-------CCCeEEEEECCCCceEEEEcCCCCCeEEEEE
Q psy467 99 H----KSSITSVDFHPYGDYLCSGS-------LDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150 (845)
Q Consensus 99 h----~~~V~~lafspdg~~Lasgs-------~DG~I~IWDl~t~~~l~~~~~h~~~V~sLaf 150 (845)
| ...|..-..+++.++++..+ -.|.+.+|..+. +.-+.+.+|......+..
T Consensus 145 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~ 206 (494)
T 1bpo_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKM 206 (494)
T ss_dssp CGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEEEEEC
T ss_pred chhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeEEEec
Confidence 4 34567777788889887543 246789999874 455667777654443333
No 299
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.09 E-value=0.21 Score=54.54 Aligned_cols=111 Identities=10% Similarity=0.015 Sum_probs=67.4
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCe-eEEEec---CCCCCeEEEEEcCC---CCEEEEEEC
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN-CIMSLS---GHSTPVESVQFGNG---EETLSAGCQ 78 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~-~i~~l~---~h~~~V~sLafSpd---g~~LaSgs~ 78 (845)
+++..+...-..-.+|+|.| +|+++ ++..+|.|.+++ .+++ .+..+. ........|+|+|+ +..|.++..
T Consensus 19 ~~~~~va~~l~~P~~ia~~p-dG~l~-V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~ 95 (354)
T 3a9g_A 19 FKISEVASDLEVPWSIAPLG-GGRYL-VTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYAS 95 (354)
T ss_dssp EEEEEEECSCSCEEEEEEEE-TTEEE-EEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred eEEEEEeCCCCCCeEEEEcC-CCeEE-EEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEe
Confidence 34555554456788999999 88744 456669999997 3454 222221 12356899999997 455544433
Q ss_pred ----C----CcEEEEECCCC--c-----EE-EEEcC-CCCCeEEEEEccCCCEEEEEE
Q psy467 79 ----S----GSIKIWNLAVP--T-----VQ-RTLNG-HKSSITSVDFHPYGDYLCSGS 119 (845)
Q Consensus 79 ----D----GtV~VWDl~tg--~-----~v-~~l~~-h~~~V~~lafspdg~~Lasgs 119 (845)
+ +.|..|+.... . .+ ..+.. .......++|.|||.+.++.+
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 96 YFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred ccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 2 56888887654 1 11 11221 112246799999998666643
No 300
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.04 E-value=0.021 Score=61.89 Aligned_cols=157 Identities=10% Similarity=0.125 Sum_probs=106.5
Q ss_pred eccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEE-ecC----CC--CCeEEEEE---cCCCCEEEEEEC--
Q psy467 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMS-LSG----HS--TPVESVQF---GNGEETLSAGCQ-- 78 (845)
Q Consensus 11 L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~-l~~----h~--~~V~sLaf---Spdg~~LaSgs~-- 78 (845)
+.....--.+++|++.++.++++.-..++|..|+...+..... +.+ .. ..+..|.| .|++.++++...
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 4444444567899884444444444789999999875543333 222 11 13689999 688777775431
Q ss_pred -----------CCcEEEEECC---CCcEEEEEcC-------------CCCCeEEEEEccCCCEEEEEECC-CeEEEEECC
Q psy467 79 -----------SGSIKIWNLA---VPTVQRTLNG-------------HKSSITSVDFHPYGDYLCSGSLD-SFIKLWDLR 130 (845)
Q Consensus 79 -----------DGtV~VWDl~---tg~~v~~l~~-------------h~~~V~~lafspdg~~Lasgs~D-G~I~IWDl~ 130 (845)
+..|..+|+. +++.+....- .......++..++|+..++++.. +.|...+..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 5779999999 7776655531 11247899999999999998888 887777765
Q ss_pred CCceEEEEc------CCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 131 RKGCIYTYR------GHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 131 t~~~l~~~~------~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.. .+..+. ......+.|+++|+|+.|++...+|.+..
T Consensus 168 G~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~ 210 (334)
T 2p9w_A 168 GK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTA 210 (334)
T ss_dssp SC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEE
T ss_pred CC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEE
Confidence 33 333221 11223679999999999988877898988
No 301
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.04 E-value=0.0014 Score=78.80 Aligned_cols=122 Identities=9% Similarity=0.030 Sum_probs=70.4
Q ss_pred CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCC----CcEEEEEcCCCCCeEEEEEccC
Q psy467 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAV----PTVQRTLNGHKSSITSVDFHPY 111 (845)
Q Consensus 37 DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~t----g~~v~~l~~h~~~V~~lafspd 111 (845)
.+.|+..++.+.+....+. ....+..|+|++.+..|+.+. ..+.|..+++.. ......+.........|++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 3578888887665544333 334567899998777776654 357899999875 2222222212223456788755
Q ss_pred CCEE-EEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEE
Q psy467 112 GDYL-CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159 (845)
Q Consensus 112 g~~L-asgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Las 159 (845)
+..| ++-...+.|.++++........+.........++++|.+.+|+.
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~ 512 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYW 512 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEE
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEE
Confidence 4444 44445678999988754433333322344667788876554443
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.99 E-value=0.095 Score=57.28 Aligned_cols=137 Identities=10% Similarity=0.184 Sum_probs=93.9
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCC----CC---EEEEEEC---CCcEEEEECC--CCcEEE
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG----EE---TLSAGCQ---SGSIKIWNLA--VPTVQR 94 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpd----g~---~LaSgs~---DGtV~VWDl~--tg~~v~ 94 (845)
...+++.....+-+.+||+ +|+.+..+.. ..++.+..-|+ |+ ++++... +++|.+|++. ++. +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 3456666667788999999 8888888863 56777777663 22 2333333 5789999773 443 55
Q ss_pred EEcC------CC-CCeEEEEE--ccC-CC-EEEEEECCCeEEEEECC-------CCceEEEEcCCCCCeEEEEEecCCCE
Q psy467 95 TLNG------HK-SSITSVDF--HPY-GD-YLCSGSLDSFIKLWDLR-------RKGCIYTYRGHSKSINSIRFSPDGQW 156 (845)
Q Consensus 95 ~l~~------h~-~~V~~laf--spd-g~-~Lasgs~DG~I~IWDl~-------t~~~l~~~~~h~~~V~sLafSPdg~~ 156 (845)
.+.. .. ..+..+++ +|. ++ ++++...+|.+..|++. +.+.++++.. .+.+-.+...+....
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGR 193 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCe
Confidence 5521 11 45566777 664 44 68888889999999882 3356677764 457889999998889
Q ss_pred EEEEeCCCcEEE
Q psy467 157 IASGGEDGVVRI 168 (845)
Q Consensus 157 Lasgs~DG~I~I 168 (845)
|+.+-++.-|..
T Consensus 194 Lyv~eEd~GIw~ 205 (355)
T 3amr_A 194 LYIAEEDEAIWK 205 (355)
T ss_dssp EEEEETTTEEEE
T ss_pred EEEecccceEEE
Confidence 999988865544
No 303
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.94 E-value=0.61 Score=50.81 Aligned_cols=102 Identities=15% Similarity=0.150 Sum_probs=62.0
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc-EEEEEc---CCCCCeEEEEEccC---CCEEEEEEC----C----C
Q psy467 58 STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT-VQRTLN---GHKSSITSVDFHPY---GDYLCSGSL----D----S 122 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~-~v~~l~---~h~~~V~~lafspd---g~~Lasgs~----D----G 122 (845)
-.....|+|.|+|+++++ ..+|.|.+++. +++ .+..+. ........|+++|+ +..|+++.. + .
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 446789999999985554 56799999973 454 222221 12345789999998 555655443 3 5
Q ss_pred eEEEEECCCC--c-----eE-EEEcC-CCCCeEEEEEecCCCEEEEEe
Q psy467 123 FIKLWDLRRK--G-----CI-YTYRG-HSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 123 ~I~IWDl~t~--~-----~l-~~~~~-h~~~V~sLafSPdg~~Lasgs 161 (845)
.|..|+.... . .+ ..+.. .......|+|.|||.+.++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 6778877643 1 11 11221 112346688999887665543
No 304
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.93 E-value=0.039 Score=58.03 Aligned_cols=104 Identities=13% Similarity=0.134 Sum_probs=55.6
Q ss_pred CCCEEEEEe-CC-----CeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEECC-----CcEEEEECCCCc--
Q psy467 27 SGQVLATGG-DD-----KKVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQS-----GSIKIWNLAVPT-- 91 (845)
Q Consensus 27 dg~~LaTgs-~D-----G~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~D-----GtV~VWDl~tg~-- 91 (845)
++.+++.|+ .+ ..+.+||..+.+-... +........++. .++..++.|+.+ ..+.+||..+++
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 456667776 33 3688899877653221 111111122222 356667777654 468999998766
Q ss_pred -EEEE--EcCCCCCeEEEEEccCCCEEEEEECC-----CeEEEEECCCCce
Q psy467 92 -VQRT--LNGHKSSITSVDFHPYGDYLCSGSLD-----SFIKLWDLRRKGC 134 (845)
Q Consensus 92 -~v~~--l~~h~~~V~~lafspdg~~Lasgs~D-----G~I~IWDl~t~~~ 134 (845)
-... +....... +++. -+++.++.|+.+ ..+.+||+.+.+-
T Consensus 92 ~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 140 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLA-GATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQW 140 (301)
T ss_dssp CCEEECCCSSCCBSC-EEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred eeEECCCCCCCccce-eEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence 3322 11111112 2222 256666777644 3588899877653
No 305
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.90 E-value=0.82 Score=51.24 Aligned_cols=247 Identities=10% Similarity=0.113 Sum_probs=150.0
Q ss_pred CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEE
Q psy467 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC 116 (845)
Q Consensus 37 DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~La 116 (845)
+..|.|.|+.++..+.+-.- .-.+.-.+|..+.||.-. ..++.|+|+++...++.+.-.+ .|..=.|-.+. .|+
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~-~l~ 120 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TVA 120 (494)
T ss_dssp CCEEEEEETTSTTSCEEEEC---CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETT-EEE
T ss_pred CCeEEEEECCCCCcceeccc---ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCC-eEE
Confidence 34788899887655433221 112344678877777765 7899999999999888887444 56666776544 455
Q ss_pred EEECCCeEEEEECCC-CceEEEEcCC----CCCeEEEEEecCCCEEEEEe---CCCcEEEeeeeccCCceeEEEECCCCc
Q psy467 117 SGSLDSFIKLWDLRR-KGCIYTYRGH----SKSINSIRFSPDGQWIASGG---EDGVVRIGASFHLTNTSIHVVDLSLVH 188 (845)
Q Consensus 117 sgs~DG~I~IWDl~t-~~~l~~~~~h----~~~V~sLafSPdg~~Lasgs---~DG~I~I~~~~~~~~~~I~vWDl~tg~ 188 (845)
..+ +..|+-|++.. ..+...+..| ...|.....+++.+|++..+ .++.+ .+.+.+|..+.+.
T Consensus 121 lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v---------~G~mQLYS~er~~ 190 (494)
T 1bpo_A 121 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV---------VGAMQLYSVDRKV 190 (494)
T ss_dssp EEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEE---------EEEEEEEESTTCC
T ss_pred EEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcc---------cceEEEeeccccc
Confidence 444 46799999964 3455555543 45678888899999987554 23322 2345558877554
Q ss_pred cCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCC
Q psy467 189 PLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRS 268 (845)
Q Consensus 189 ~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~ 268 (845)
. ..+.+|... . ..+..++..
T Consensus 191 s---------------------Q~ieGhaa~-------F-----------------------------~~~~~~g~~--- 210 (494)
T 1bpo_A 191 S---------------------QPIEGHAAS-------F-----------------------------AQFKMEGNA--- 210 (494)
T ss_dssp E---------------------EEECCSEEE-------E-----------------------------EEEECTTCS---
T ss_pred c---------------------chheeeeee-------e-----------------------------EEEecCCCC---
Confidence 3 334444332 1 111122210
Q ss_pred CcccccccCceeEEEcCCCCcccceEEEEEeC---CCeEEEEECCCC---------eEEEEec---CCCCCEEEEEEeCC
Q psy467 269 GTCVPVSVSRTSLSILPQSPMLCFILTTSSSA---DRTVNFWDLEKF---------SLVSTTE---KNSSTIRRLTFSEG 333 (845)
Q Consensus 269 ~~~~~~~~~I~slafSPdg~~~~~~lLatgs~---DG~I~IWDl~s~---------~~l~tl~---gh~~~VtslafSpd 333 (845)
.+.. +++.+.. .+.++|.++... +.+..+- ...+--.++..|+.
T Consensus 211 -------~~~~--------------lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~k 269 (494)
T 1bpo_A 211 -------EEST--------------LFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK 269 (494)
T ss_dssp -------SEEE--------------EEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETT
T ss_pred -------CCce--------------EEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEeccc
Confidence 0000 2222221 257777777432 1111111 12445678899998
Q ss_pred CCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc--CCceEEEE
Q psy467 334 GECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT--GTQLWFRR 380 (845)
Q Consensus 334 G~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS--dg~lLaaS 380 (845)
-..++.-+.-| |++||++++.++..-+-....|..-+-+ .+..+++.
T Consensus 270 ygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vn 319 (494)
T 1bpo_A 270 HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVN 319 (494)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred CCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEc
Confidence 88999999999 9999999999998777666666555544 34444433
No 306
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.90 E-value=0.0022 Score=77.00 Aligned_cols=153 Identities=9% Similarity=-0.008 Sum_probs=88.4
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCC----CeeEEEecCCCCCeEEEEEcCCCCEE-EEEECCCcEEEEECCCC
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGK----SNCIMSLSGHSTPVESVQFGNGEETL-SAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t----~~~i~~l~~h~~~V~sLafSpdg~~L-aSgs~DGtV~VWDl~tg 90 (845)
..+.+|+|++..+.++++-...+.|..+++.+ ......+.........|++.+.+..| ++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 45678899883444444445567899998865 22222222122335667887644444 44445688999998865
Q ss_pred cEEEEEcCCCCCeEEEEEccCCCEEEEEEC--CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe-CCCcEE
Q psy467 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSL--DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG-EDGVVR 167 (845)
Q Consensus 91 ~~v~~l~~h~~~V~~lafspdg~~Lasgs~--DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs-~DG~I~ 167 (845)
.....+.........+++.|.+.+|+.+.. .+.|..+++............-.....|+|+|++..|+.+. ..+.|.
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 565 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEE
Confidence 444444333345678899997666655543 26788877753222222222233467899998765555443 455666
Q ss_pred E
Q psy467 168 I 168 (845)
Q Consensus 168 I 168 (845)
.
T Consensus 566 ~ 566 (699)
T 1n7d_A 566 S 566 (699)
T ss_dssp E
T ss_pred E
Confidence 6
No 307
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.84 E-value=0.74 Score=49.75 Aligned_cols=247 Identities=10% Similarity=0.110 Sum_probs=150.9
Q ss_pred CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEE
Q psy467 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC 116 (845)
Q Consensus 37 DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~La 116 (845)
+..|.|.|+.++..+.+-.-. -.+.-.+|..+.||.-. ..++.++|+++...++.+.- ..+|..=.|-.+. .|+
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~---AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~ 121 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPIS---ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVA 121 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECC---CSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS-EEE
T ss_pred CCEEEEEECCCCCCccccccc---cceeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC-eEE
Confidence 347888998876554332211 12333588888887765 78899999999998888874 4567777787544 455
Q ss_pred EEECCCeEEEEECCC-CceEEEEcCC----CCCeEEEEEecCCCEEEEEeC---CCcEEEeeeeccCCceeEEEECCCCc
Q psy467 117 SGSLDSFIKLWDLRR-KGCIYTYRGH----SKSINSIRFSPDGQWIASGGE---DGVVRIGASFHLTNTSIHVVDLSLVH 188 (845)
Q Consensus 117 sgs~DG~I~IWDl~t-~~~l~~~~~h----~~~V~sLafSPdg~~Lasgs~---DG~I~I~~~~~~~~~~I~vWDl~tg~ 188 (845)
..+ +..|+-|++.. ..+...+..| ..+|.....+++.+|++..+- ++.+ .+.+.+|..+.+.
T Consensus 122 lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v---------~G~mQLYS~er~~ 191 (365)
T 2xzh_A 122 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV---------VGAMQLYSVDRKV 191 (365)
T ss_dssp EEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEE---------EEEEEEEETTTTE
T ss_pred EEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCcc---------ceeEEEEeecccc
Confidence 444 45799999964 3455555443 456778888999999776542 3322 2345558776544
Q ss_pred cCCCCCCCCCcceeecCCCCeEEEEecCCCCCccceeeEeeecccccccccccchhhhhhccCCCceeEEEcCCCCcCCC
Q psy467 189 PLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRS 268 (845)
Q Consensus 189 ~l~~~~~~~i~svs~spdg~~l~~~~~h~~~~~~~~i~V~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~fspdg~~~~~ 268 (845)
. ..+.+|... . ..+..++..
T Consensus 192 s---------------------Q~ieGhaa~-------F-----------------------------~~~~~~g~~--- 211 (365)
T 2xzh_A 192 S---------------------QPIEGHAAS-------F-----------------------------AQFKMEGNA--- 211 (365)
T ss_dssp E---------------------EEECCSEEE-------E-----------------------------EEECCTTCS---
T ss_pred c---------------------ceeeeeeee-------e-----------------------------EEEecCCCC---
Confidence 3 334444322 1 112222220
Q ss_pred CcccccccCceeEEEcCCCCcccceEEEEEe---CCCeEEEEECCCC---------eEEEEecC---CCCCEEEEEEeCC
Q psy467 269 GTCVPVSVSRTSLSILPQSPMLCFILTTSSS---ADRTVNFWDLEKF---------SLVSTTEK---NSSTIRRLTFSEG 333 (845)
Q Consensus 269 ~~~~~~~~~I~slafSPdg~~~~~~lLatgs---~DG~I~IWDl~s~---------~~l~tl~g---h~~~VtslafSpd 333 (845)
.+.. +++.+. ..+.++|-++... +.+..+-. ..+--.++..|+.
T Consensus 212 -------~~~~--------------lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~k 270 (365)
T 2xzh_A 212 -------EEST--------------LFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK 270 (365)
T ss_dssp -------SCEE--------------EEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETT
T ss_pred -------CCce--------------EEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEeccc
Confidence 0000 122111 1247777777331 12222221 2445678889998
Q ss_pred CCEEEEEeCCC-EEEEEecCCceEEEecCCCCCeEEEEEc--CCceEEEE
Q psy467 334 GECLLGGDTEG-LKVYGWEPARQYDAQPMGWGKVQDLAVT--GTQLWFRR 380 (845)
Q Consensus 334 G~~Lasgs~DG-I~IWDl~tgk~l~tl~~h~~~VtsVafS--dg~lLaaS 380 (845)
-..++.-+.-| |++||++++.++..-+-..+.|..-+-+ .+..+++.
T Consensus 271 ygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vn 320 (365)
T 2xzh_A 271 HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVN 320 (365)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEE
T ss_pred CCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEc
Confidence 88999999999 9999999999998777666776655544 45555554
No 308
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.83 E-value=1.3 Score=52.32 Aligned_cols=150 Identities=4% Similarity=-0.110 Sum_probs=96.7
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEEC--CCcEEEEECCCCcEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ--SGSIKIWNLAVPTVQ 93 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~--DGtV~VWDl~tg~~v 93 (845)
.....|++.+.++++.++-...+.|.+.+++.......+...-.....|++.|...+|..... .+.|...+++.....
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~ 159 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT 159 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence 356788888745666666666788999998654433333344556799999996666666553 467888888754433
Q ss_pred EEEcCCCCCeEEEEEccCCCEEEEEE-CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 94 RTLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 94 ~~l~~h~~~V~~lafspdg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
..+. .-.....|++++++..|+.+. ..+.|...|+..... ..+...-....++++.. +..+++-...+.|..
T Consensus 160 ~l~~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~ 232 (628)
T 4a0p_A 160 TLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIER 232 (628)
T ss_dssp EEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEE
T ss_pred EEEC-CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEE
Confidence 3333 445678999999887777665 457899999865433 23333334556777764 333444444666766
No 309
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.80 E-value=0.23 Score=53.84 Aligned_cols=115 Identities=8% Similarity=0.089 Sum_probs=78.6
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEE-CCCcEEEEECCCCcEEEE-EcC----CCC--CeEEEEE---ccCCCEEEEEE---
Q psy467 54 LSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTVQRT-LNG----HKS--SITSVDF---HPYGDYLCSGS--- 119 (845)
Q Consensus 54 l~~h~~~V~sLafSpdg~~LaSgs-~DGtV~VWDl~tg~~v~~-l~~----h~~--~V~~laf---spdg~~Lasgs--- 119 (845)
+......-.+++|++....|..++ ..++|..|+...+..... +.. ... .+..+.| .|+++++++..
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 344455567889988666666666 689999999986644333 222 111 3578999 68877776544
Q ss_pred ----------CCCeEEEEECC---CCceEEEEcC-------------CCCCeEEEEEecCCCEEEEEeCC-CcEEE
Q psy467 120 ----------LDSFIKLWDLR---RKGCIYTYRG-------------HSKSINSIRFSPDGQWIASGGED-GVVRI 168 (845)
Q Consensus 120 ----------~DG~I~IWDl~---t~~~l~~~~~-------------h~~~V~sLafSPdg~~Lasgs~D-G~I~I 168 (845)
.+..|..+|+. +++.+....- .......++..++|+..++++.. +.|..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~r 163 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIAR 163 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEE
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEE
Confidence 26779999998 7777655431 11247889999999988888766 66544
No 310
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.67 E-value=0.31 Score=53.05 Aligned_cols=147 Identities=11% Similarity=0.067 Sum_probs=80.1
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEe-------cCCCCCeEEEEEcCC---CCEEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-------SGHSTPVESVQFGNG---EETLSAGC 77 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l-------~~h~~~V~sLafSpd---g~~LaSgs 77 (845)
+..+...-..-+.|+|.| +|+.|+++...|.|++++.. +.....+ .........|+|+|+ +..|..+.
T Consensus 10 ~~~va~~l~~P~~i~~~p-dG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 10 VEVLQDKLDHPWALAFLP-DNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp EEEEEEEESSEEEEEECS-TTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEE
T ss_pred EEEEECCCCCcEEEEEcC-CCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEE
Confidence 334433344678999999 88834455567999999853 3321111 112346789999996 45444442
Q ss_pred -C-------CCcEEEEECCCC--c--EEEE-EcC------CCCCeEEEEEccCCCEEEEEEC-------------CCeEE
Q psy467 78 -Q-------SGSIKIWNLAVP--T--VQRT-LNG------HKSSITSVDFHPYGDYLCSGSL-------------DSFIK 125 (845)
Q Consensus 78 -~-------DGtV~VWDl~tg--~--~v~~-l~~------h~~~V~~lafspdg~~Lasgs~-------------DG~I~ 125 (845)
. ...|..|++..+ . .... +.. .......|+|.|||.+.++.+. .|.|.
T Consensus 88 ~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ 167 (353)
T 2g8s_A 88 SEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLV 167 (353)
T ss_dssp EEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEE
T ss_pred eCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEE
Confidence 2 235666776533 1 1111 111 1112357999999965555432 24576
Q ss_pred EEECCCC--------------ceEEEEcCCCCCeEEEEEec-CCCEEE
Q psy467 126 LWDLRRK--------------GCIYTYRGHSKSINSIRFSP-DGQWIA 158 (845)
Q Consensus 126 IWDl~t~--------------~~l~~~~~h~~~V~sLafSP-dg~~La 158 (845)
-++.... ..+... ++ .....++|+| +|++++
T Consensus 168 ri~~dG~~p~~npf~~~~~~~~~i~a~-G~-rnp~gl~~d~~~g~l~~ 213 (353)
T 2g8s_A 168 RLTDQGEIPDDNPFIKESGVRAEIWSY-GI-RNPQGMAMNPWSNALWL 213 (353)
T ss_dssp EEETTSCCCTTCTTTTSTTSCTTEEEE-CC-SEEEEEEEETTTTEEEE
T ss_pred EECCCCCCCCCCCCcCCCCCCccEEEE-cC-cCccceEEECCCCCEEE
Confidence 6676422 111111 22 3467899999 454433
No 311
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.50 E-value=0.2 Score=52.49 Aligned_cols=105 Identities=10% Similarity=0.169 Sum_probs=54.9
Q ss_pred CCCEEEEEeCC----CeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEECC-----CcEEEEECCCCcEEEE
Q psy467 27 SGQVLATGGDD----KKVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQS-----GSIKIWNLAVPTVQRT 95 (845)
Q Consensus 27 dg~~LaTgs~D----G~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~D-----GtV~VWDl~tg~~v~~ 95 (845)
++.+++.|+.+ ..+..||..+.+-... +......-..+.+ ++..++.|+.+ ..+.+||..+.+-...
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeC
Confidence 34566666643 3588899877653222 1111111122222 56667777654 4588999987753332
Q ss_pred EcCCCCC-eEEEEEccCCCEEEEEECCC-----eEEEEECCCCce
Q psy467 96 LNGHKSS-ITSVDFHPYGDYLCSGSLDS-----FIKLWDLRRKGC 134 (845)
Q Consensus 96 l~~h~~~-V~~lafspdg~~Lasgs~DG-----~I~IWDl~t~~~ 134 (845)
-...... -.+++. -++..++.|+.++ .+.+||+.+.+-
T Consensus 93 ~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W 136 (302)
T 2xn4_A 93 ANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEW 136 (302)
T ss_dssp CCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEE
T ss_pred CCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeE
Confidence 2111111 112222 2566777777553 477888876653
No 312
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.48 E-value=1.4 Score=55.77 Aligned_cols=151 Identities=12% Similarity=0.099 Sum_probs=83.7
Q ss_pred CCcEEEEEEecC-----CCCEEEEEeC-CCeEEEEECCCCeeEEEecC-CCCCeEEEEEc--CCCCEEEEEECCCcEEEE
Q psy467 15 GASVNCLALGKK-----SGQVLATGGD-DKKVNLWALGKSNCIMSLSG-HSTPVESVQFG--NGEETLSAGCQSGSIKIW 85 (845)
Q Consensus 15 ~~~V~~LafSp~-----dg~~LaTgs~-DG~I~IWdl~t~~~i~~l~~-h~~~V~sLafS--pdg~~LaSgs~DGtV~VW 85 (845)
...|.|+++.+. .++++|+|.. |++|+|+++.+.+.+....- ......++.+. ....+|..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 568999999762 2479999996 99999999987766543321 12344444443 234578899999998666
Q ss_pred ECC--CCcEEEE--EcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeE-EEEEecC--CCEEE
Q psy467 86 NLA--VPTVQRT--LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN-SIRFSPD--GQWIA 158 (845)
Q Consensus 86 Dl~--tg~~v~~--l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~-sLafSPd--g~~La 158 (845)
.++ +|..... ..-...++.-..+...+..-+.+..+....++.-+ ++....--.. ..+. ...|+.. ..-++
T Consensus 633 ~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s~l~~-~~v~~~~~F~se~~~~g~v 710 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFSNVNL-KEVNYMCPLNSDGYPDSLA 710 (1158)
T ss_dssp EECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEEEBSS-SCCCEEEEECCSSSTTEEE
T ss_pred EEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEeccCh-HHhceEeccCcccCCCcEE
Confidence 554 4544321 22224466655565555443334445555555443 3333221111 2233 3345432 23344
Q ss_pred EEeCCCcEEE
Q psy467 159 SGGEDGVVRI 168 (845)
Q Consensus 159 sgs~DG~I~I 168 (845)
..+ ++.++|
T Consensus 711 ~~~-~~~LrI 719 (1158)
T 3ei3_A 711 LAN-NSTLTI 719 (1158)
T ss_dssp EEC-SSCEEE
T ss_pred EEc-CCceEE
Confidence 443 455888
No 313
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.43 E-value=0.43 Score=50.07 Aligned_cols=104 Identities=11% Similarity=0.047 Sum_probs=56.4
Q ss_pred CCEEEEEeC--CCeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEECC----CcEEEEECCCCcEEEEEcCC
Q psy467 28 GQVLATGGD--DKKVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQS----GSIKIWNLAVPTVQRTLNGH 99 (845)
Q Consensus 28 g~~LaTgs~--DG~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~D----GtV~VWDl~tg~~v~~l~~h 99 (845)
+.+++.|+. ...+.+||..+.+-... +......-.++. -++..++.|+.+ ..+.+||..+++-...-...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 345556654 35788999877653221 111112222222 256667777654 67889999887543322211
Q ss_pred CCCe-EEEEEccCCCEEEEEECC------CeEEEEECCCCce
Q psy467 100 KSSI-TSVDFHPYGDYLCSGSLD------SFIKLWDLRRKGC 134 (845)
Q Consensus 100 ~~~V-~~lafspdg~~Lasgs~D------G~I~IWDl~t~~~ 134 (845)
.... .+++ .-+++.++.|+.+ ..+.+||..+.+-
T Consensus 90 ~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 90 TPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp SCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred ccccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 1111 1222 2256677777755 4588999887653
No 314
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.94 E-value=0.31 Score=55.76 Aligned_cols=62 Identities=19% Similarity=0.215 Sum_probs=41.8
Q ss_pred eEEEEEcc-CCCEEEEEE-CCCeEEEEECCCCceEEEEcCC---CCCeEEEEE-------ecCCCEEEEEeCCC
Q psy467 103 ITSVDFHP-YGDYLCSGS-LDSFIKLWDLRRKGCIYTYRGH---SKSINSIRF-------SPDGQWIASGGEDG 164 (845)
Q Consensus 103 V~~lafsp-dg~~Lasgs-~DG~I~IWDl~t~~~l~~~~~h---~~~V~sLaf-------SPdg~~Lasgs~DG 164 (845)
...|+|+| ++..|+++. ..+.|++.|+.++......... ......++| +++|++|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 46899998 344455444 4467999999876655444322 235889999 99999777666544
No 315
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.84 E-value=2.6 Score=45.58 Aligned_cols=103 Identities=13% Similarity=0.151 Sum_probs=59.1
Q ss_pred CCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEc-------CCCCCeEEEEEccC---CCEEEEEE-C-------
Q psy467 59 TPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLN-------GHKSSITSVDFHPY---GDYLCSGS-L------- 120 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~-------~h~~~V~~lafspd---g~~Lasgs-~------- 120 (845)
.....|+|.|+|+.|+++...|.|++++.. +.....+. ........|+|+|+ +..|+++. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 356899999999934445578999999853 33211111 12345689999996 55555443 2
Q ss_pred CCeEEEEECCCC--c--eEEE-EcC------CCCCeEEEEEecCCCEEEEEeC
Q psy467 121 DSFIKLWDLRRK--G--CIYT-YRG------HSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 121 DG~I~IWDl~t~--~--~l~~-~~~------h~~~V~sLafSPdg~~Lasgs~ 162 (845)
...|..|++... . .... +.. .......|+|.|||.+.++.+.
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 235666766532 1 1111 111 1122457999999965555443
No 316
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.80 E-value=0.28 Score=51.76 Aligned_cols=104 Identities=10% Similarity=0.114 Sum_probs=54.5
Q ss_pred CCCEEEEEeCC----CeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEEC----C-----CcEEEEECCCCc
Q psy467 27 SGQVLATGGDD----KKVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQ----S-----GSIKIWNLAVPT 91 (845)
Q Consensus 27 dg~~LaTgs~D----G~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~----D-----GtV~VWDl~tg~ 91 (845)
++.+++.|+.+ ..+.+||..+.+-... +......-..+.+ ++..++.|+. + ..+.+||..+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 56777777742 3688999876653221 1111111122222 5566666654 2 468899998765
Q ss_pred EEEEE--cCCCCCeEEEEEccCCCEEEEEECC-----CeEEEEECCCCce
Q psy467 92 VQRTL--NGHKSSITSVDFHPYGDYLCSGSLD-----SFIKLWDLRRKGC 134 (845)
Q Consensus 92 ~v~~l--~~h~~~V~~lafspdg~~Lasgs~D-----G~I~IWDl~t~~~ 134 (845)
-...- .........+.+ +++.++.|+.+ ..+.+||..+.+-
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 149 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEW 149 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEE
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeE
Confidence 33221 111111222222 56666666643 3588889876543
No 317
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.73 E-value=0.51 Score=52.76 Aligned_cols=139 Identities=19% Similarity=0.141 Sum_probs=96.1
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEEEecCC----CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCc-----------
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGH----STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT----------- 91 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h----~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~----------- 91 (845)
+|..++++-. +.||.-++......+.+... -..|..+..+|+|++||..+ +.+|.|-.+..+.
T Consensus 31 n~t~i~~a~~-n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFIQD-NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEEET-TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEEEC-CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 6666666643 57887787644445555432 23688899999999999885 6688888886321
Q ss_pred -EEEEEcC------CCCCeEEEEEccC---CCEEEEEECCCeEEEEECCCC--ceEEEEc---------CCCCCeEEEEE
Q psy467 92 -VQRTLNG------HKSSITSVDFHPY---GDYLCSGSLDSFIKLWDLRRK--GCIYTYR---------GHSKSINSIRF 150 (845)
Q Consensus 92 -~v~~l~~------h~~~V~~lafspd---g~~Lasgs~DG~I~IWDl~t~--~~l~~~~---------~h~~~V~sLaf 150 (845)
..+.+.- ...+|..+.|||- +..|++-..|+.|++||+... ++. .++ .....|.+++|
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence 1233332 2467999999995 468999999999999999742 122 222 22357889999
Q ss_pred ecCCCEEEEEe--CCCcEEE
Q psy467 151 SPDGQWIASGG--EDGVVRI 168 (845)
Q Consensus 151 SPdg~~Lasgs--~DG~I~I 168 (845)
..++-.|...+ .+|.|+-
T Consensus 188 g~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp CTTSSCEEEEECTTSCEEEE
T ss_pred cCCCcEEEEEecCCCCCEEE
Confidence 98877676655 7777765
No 318
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.73 E-value=4.9 Score=47.89 Aligned_cols=140 Identities=15% Similarity=0.199 Sum_probs=83.2
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEec----CCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC
Q psy467 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS----GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~----~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg 90 (845)
...|.||.-.. +|. |..|+.+| +..||-.. ...+. .....|.++....++ .|..|+.+| +..+|..+.
T Consensus 21 ~n~V~~I~qD~-~G~-lWigT~~G-L~ryDG~~---~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~ 92 (758)
T 3ott_A 21 ASVVSCFLQDS-EGL-IWIGSNKG-LFSYDGYS---TQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRAD 92 (758)
T ss_dssp CCCEEEEEECT-TSC-EEEEESSC-EEEECSSC---EEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTT
T ss_pred cceEEEEEECC-CCC-EEEEECCC-ccccCCCc---eEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCC
Confidence 45799999876 554 55667777 66676432 22221 123568888877765 566666554 889998876
Q ss_pred cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc-----CCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR-----GHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 91 ~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~-----~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
+...........|.++.. .++ .|..++.+ -|..+|..+++.. .+. .....|.++....+|.+.+ ++.+|
T Consensus 93 ~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G- 166 (758)
T 3ott_A 93 RYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNG- 166 (758)
T ss_dssp EECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEE-EETTE-
T ss_pred EEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCC-
Confidence 432211112234776654 344 56667766 5888998765543 331 1234578888877777554 44444
Q ss_pred EEE
Q psy467 166 VRI 168 (845)
Q Consensus 166 I~I 168 (845)
+..
T Consensus 167 l~~ 169 (758)
T 3ott_A 167 LCR 169 (758)
T ss_dssp EEE
T ss_pred Hhh
Confidence 555
No 319
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.70 E-value=0.44 Score=49.78 Aligned_cols=60 Identities=10% Similarity=0.064 Sum_probs=34.0
Q ss_pred EEEEEeCC-----CeEEEEECCCCeEEEE--ecCCCCCEEEEEEeCCCCEEEEEeCC-----C-EEEEEecCCce
Q psy467 294 LTTSSSAD-----RTVNFWDLEKFSLVST--TEKNSSTIRRLTFSEGGECLLGGDTE-----G-LKVYGWEPARQ 355 (845)
Q Consensus 294 lLatgs~D-----G~I~IWDl~s~~~l~t--l~gh~~~VtslafSpdG~~Lasgs~D-----G-I~IWDl~tgk~ 355 (845)
+++.|+.+ ..+.+||+.+.+-... +........++. -++++++.|+.+ . +.+||..+.+-
T Consensus 162 iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 162 IYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSW 234 (301)
T ss_dssp EEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcE
Confidence 66666544 4688999887643322 111111112222 266777777653 2 88999887653
No 320
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.64 E-value=1.2 Score=56.79 Aligned_cols=118 Identities=10% Similarity=0.226 Sum_probs=76.0
Q ss_pred CCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEE
Q psy467 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC 116 (845)
Q Consensus 37 DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~La 116 (845)
..+|.|.|+.++..+.+-. -.--+.-.+|..+.||.-. ..++.|+|+++...++.+.- ..+|..=.|-.+. .|+
T Consensus 47 ~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~-~l~ 120 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVA 120 (1630)
T ss_pred CceEEEEECCCCCCccccc---ccchhhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC-eeE
Confidence 3478888887765542211 1122334577777776654 78999999998887777763 3456666776544 444
Q ss_pred EEECCCeEEEEECCC-CceEEEEcCC----CCCeEEEEEecCCCEEEEEe
Q psy467 117 SGSLDSFIKLWDLRR-KGCIYTYRGH----SKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 117 sgs~DG~I~IWDl~t-~~~l~~~~~h----~~~V~sLafSPdg~~Lasgs 161 (845)
..+ +..|..|++.. ..+...+..| ...|.....+++.+|++..|
T Consensus 121 lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~g 169 (1630)
T 1xi4_A 121 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTG 169 (1630)
T ss_pred EEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEe
Confidence 443 45799999964 2343333333 45677888899999977654
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.61 E-value=1.7 Score=45.75 Aligned_cols=100 Identities=9% Similarity=0.048 Sum_probs=53.5
Q ss_pred EEEEEeCCCeEEEEECCCCeeEE-EecCCCCCeEEEEEcCCCCEEEEEEC-----C------CcEEEEECCCCcEEEEEc
Q psy467 30 VLATGGDDKKVNLWALGKSNCIM-SLSGHSTPVESVQFGNGEETLSAGCQ-----S------GSIKIWNLAVPTVQRTLN 97 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~-~l~~h~~~V~sLafSpdg~~LaSgs~-----D------GtV~VWDl~tg~~v~~l~ 97 (845)
+++.|+ ..+.+||..+.+-.. .+..........+...++..++.|+. . ..+.+||..+++-. .+.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~-~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL-GMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE-ECC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE-ECC
Confidence 344555 479999998776432 22212223333334457777777773 1 12778898876542 222
Q ss_pred CCCCCe--EEEEEccCCCEEEEEECC--------CeEEEEECCCCc
Q psy467 98 GHKSSI--TSVDFHPYGDYLCSGSLD--------SFIKLWDLRRKG 133 (845)
Q Consensus 98 ~h~~~V--~~lafspdg~~Lasgs~D--------G~I~IWDl~t~~ 133 (845)
....+- .+++.. ++..++.|+.+ ..+.+||..+.+
T Consensus 84 ~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~ 128 (315)
T 4asc_A 84 PLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFK 128 (315)
T ss_dssp CBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTE
T ss_pred CCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCc
Confidence 111111 122222 55666666632 358889988764
No 322
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.54 E-value=3.5 Score=44.84 Aligned_cols=116 Identities=10% Similarity=0.019 Sum_probs=74.1
Q ss_pred ceeeeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee--EEEe----cCCCCCeEEEEEcCC---CCEE
Q psy467 3 AKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC--IMSL----SGHSTPVESVQFGNG---EETL 73 (845)
Q Consensus 3 irlw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~--i~~l----~~h~~~V~sLafSpd---g~~L 73 (845)
..+|.+..+...-..-+.|+|.| +|+++++--..|.|++++..+++. +..+ .........|+|+|+ +.+|
T Consensus 19 ~~~~~~~~va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~l 97 (347)
T 3das_A 19 GSVKVLRTVATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMV 97 (347)
T ss_dssp CCEEEEEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEE
T ss_pred CCCceeEEeecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEE
Confidence 34677788877777889999999 898777665589999998765543 2222 123456899999995 3444
Q ss_pred EEE-E--CCCcEEEEECCCC----------cEE-EEEcC-CCCCeEEEEEccCCCEEEEEE
Q psy467 74 SAG-C--QSGSIKIWNLAVP----------TVQ-RTLNG-HKSSITSVDFHPYGDYLCSGS 119 (845)
Q Consensus 74 aSg-s--~DGtV~VWDl~tg----------~~v-~~l~~-h~~~V~~lafspdg~~Lasgs 119 (845)
... + .++.|.-|....+ +.+ ..+.. .......|.|.|||.+.++.+
T Consensus 98 Yv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 98 YAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 432 2 3556666766541 111 22321 112345799999998777654
No 323
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.43 E-value=1.3 Score=46.17 Aligned_cols=62 Identities=10% Similarity=0.165 Sum_probs=33.2
Q ss_pred CEEEEEECC----CcEEEEECCCCcEEEEEcCCC-CC-eEEEEEccCCCEEEEEECC-----CeEEEEECCCCce
Q psy467 71 ETLSAGCQS----GSIKIWNLAVPTVQRTLNGHK-SS-ITSVDFHPYGDYLCSGSLD-----SFIKLWDLRRKGC 134 (845)
Q Consensus 71 ~~LaSgs~D----GtV~VWDl~tg~~v~~l~~h~-~~-V~~lafspdg~~Lasgs~D-----G~I~IWDl~t~~~ 134 (845)
..++.|+.+ ..+..+|+.+.+-.. +.... .. -.+++. -++..++.|+.+ ..+.+||..+.+-
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 89 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQ-VAELPSRRCRAGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQW 89 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEE
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeE-cccCCcccccceEEE-ECCEEEEEeCcCCCccccceEEECCCCCce
Confidence 444555432 458888988765332 22111 11 112222 256667777654 3588899877653
No 324
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.36 E-value=1.4 Score=46.05 Aligned_cols=105 Identities=9% Similarity=0.074 Sum_probs=57.5
Q ss_pred CCCEEEEEeCC----CeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEECC------CcEEEEECCCCcEEE
Q psy467 27 SGQVLATGGDD----KKVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQS------GSIKIWNLAVPTVQR 94 (845)
Q Consensus 27 dg~~LaTgs~D----G~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~D------GtV~VWDl~tg~~v~ 94 (845)
++.+++.|+.+ ..+.+||..+.+-... +......-.++.+ ++..++.|+.+ ..+.+||..+.+-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 56777777754 5788899877643322 2211222222222 56677777654 468999998875433
Q ss_pred EEcCCCC-CeEEEEEccCCCEEEEEEC---------CCeEEEEECCCCce
Q psy467 95 TLNGHKS-SITSVDFHPYGDYLCSGSL---------DSFIKLWDLRRKGC 134 (845)
Q Consensus 95 ~l~~h~~-~V~~lafspdg~~Lasgs~---------DG~I~IWDl~t~~~ 134 (845)
.-..... .-.+++. -+++.++.|+. -..+.+||+.+.+-
T Consensus 133 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W 181 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW 181 (306)
T ss_dssp ECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEE
T ss_pred CCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeE
Confidence 2111111 1112222 25666666653 34588999987643
No 325
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.21 E-value=2.1 Score=46.73 Aligned_cols=107 Identities=17% Similarity=0.205 Sum_probs=60.0
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEE------------ECCCcEEEEECCC--CcEE-EEEcC-----CCCCeEEEEEcc--C
Q psy467 54 LSGHSTPVESVQFGNGEETLSAG------------CQSGSIKIWNLAV--PTVQ-RTLNG-----HKSSITSVDFHP--Y 111 (845)
Q Consensus 54 l~~h~~~V~sLafSpdg~~LaSg------------s~DGtV~VWDl~t--g~~v-~~l~~-----h~~~V~~lafsp--d 111 (845)
+.+-......+...++|..++++ ..+|.|.++|.++ ++.. ..+.+ .......+.+.+ +
T Consensus 45 i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~d 124 (355)
T 3sre_A 45 VKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDD 124 (355)
T ss_dssp CTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTT
T ss_pred eCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCC
Confidence 34323456677778876544443 1689999999974 3321 12222 123567788766 3
Q ss_pred CC-EEEEEE-C--CCeEEEEECCCC-c---eEEEEcCC-CCCeEEEEEecCCCEEEEE
Q psy467 112 GD-YLCSGS-L--DSFIKLWDLRRK-G---CIYTYRGH-SKSINSIRFSPDGQWIASG 160 (845)
Q Consensus 112 g~-~Lasgs-~--DG~I~IWDl~t~-~---~l~~~~~h-~~~V~sLafSPdg~~Lasg 160 (845)
+. +|+++. . +.+|.+|++... . .+..+.+. -...+.+++.++|.+.++.
T Consensus 125 g~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~ 182 (355)
T 3sre_A 125 NTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATN 182 (355)
T ss_dssp CCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEE
T ss_pred CcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecC
Confidence 53 454443 2 457778777543 2 22333322 2357788888888766654
No 326
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.92 E-value=5.3 Score=43.41 Aligned_cols=111 Identities=14% Similarity=0.129 Sum_probs=67.4
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE--EEEc----CCCCCeEEEEEccC---CCEEEEE-E--
Q psy467 52 MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ--RTLN----GHKSSITSVDFHPY---GDYLCSG-S-- 119 (845)
Q Consensus 52 ~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v--~~l~----~h~~~V~~lafspd---g~~Lasg-s-- 119 (845)
..+...-...+.|+|.|+|.++++--..|.|++++..+++.. ..+. ........|+++|+ +..|++. +
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 334444556789999999997777654899999987666532 2221 23456789999995 4455443 2
Q ss_pred CCCeEEEEECCCC----------ceEE-EEc-CCCCCeEEEEEecCCCEEEEEeC
Q psy467 120 LDSFIKLWDLRRK----------GCIY-TYR-GHSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 120 ~DG~I~IWDl~t~----------~~l~-~~~-~h~~~V~sLafSPdg~~Lasgs~ 162 (845)
.++.|.-|.+..+ +.+. .+. .....-..|+|.|||.+.++.+.
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 3456666766541 1111 221 11123456889998877666554
No 327
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.85 E-value=2.6 Score=46.06 Aligned_cols=75 Identities=12% Similarity=0.136 Sum_probs=47.6
Q ss_pred CeEEEEECCCCeEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC--EEEEEecC-Cce--EEEecCCCCCeEEEEEc-C-C
Q psy467 302 RTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG--LKVYGWEP-ARQ--YDAQPMGWGKVQDLAVT-G-T 374 (845)
Q Consensus 302 G~I~IWDl~s~~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG--I~IWDl~t-gk~--l~tl~~h~~~VtsVafS-d-g 374 (845)
|.|+.+|.. +.. .+...-...+.++|||||+.|+.+.... |..|+++. ++. .+.+ ...+..-.+++. + |
T Consensus 203 g~vyr~d~~--~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G 278 (355)
T 3sre_A 203 SFVTYYSPN--DVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTG 278 (355)
T ss_dssp EEEEEECTT--CCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTC
T ss_pred cEEEEEECC--eEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCC
Confidence 456666653 222 2222234579999999999988887544 99999874 332 1233 224667888888 4 8
Q ss_pred ceEEEE
Q psy467 375 QLWFRR 380 (845)
Q Consensus 375 ~lLaaS 380 (845)
.+.+++
T Consensus 279 ~lwva~ 284 (355)
T 3sre_A 279 DLWVGC 284 (355)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 876654
No 328
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.84 E-value=0.76 Score=58.45 Aligned_cols=122 Identities=11% Similarity=0.204 Sum_probs=78.4
Q ss_pred EEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCC-cEEEEEcCC-
Q psy467 22 ALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP-TVQRTLNGH- 99 (845)
Q Consensus 22 afSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg-~~v~~l~~h- 99 (845)
-.+| ..+.+|.=. ..++.|+|+++...++...- ...|.-=.|-.+ +.|+.. .+..|.-|++... .+++.|..|
T Consensus 72 IMnP-~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~-~~l~lV-T~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 72 IMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALV-TDNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred ccCC-CcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCC-CeeEEE-cCCeEEEeccCCCCccHHHHhcch
Confidence 3456 556666654 56899999988887777663 445766677644 445444 3668999999742 444444433
Q ss_pred ---CCCeEEEEEccCCCEEEEEE-------CCCeEEEEECCCCceEEEEcCCCCCeEEEE
Q psy467 100 ---KSSITSVDFHPYGDYLCSGS-------LDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149 (845)
Q Consensus 100 ---~~~V~~lafspdg~~Lasgs-------~DG~I~IWDl~t~~~l~~~~~h~~~V~sLa 149 (845)
...|..-..+++.++++..| ..|.+.+|.++. +.-+.+.+|......+.
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er-~~sQ~iegha~~F~~~~ 205 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFK 205 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc-ccchhhhHhHhhhheec
Confidence 35677777888888877543 357889998864 34445566655443333
No 329
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.76 E-value=0.59 Score=50.85 Aligned_cols=113 Identities=12% Similarity=0.069 Sum_probs=75.4
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeEEEecCC-CCCeEEEEEc--CCCCEEEEE--ECCCcEEEEECCCCcEEEEEcC----
Q psy467 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGH-STPVESVQFG--NGEETLSAG--CQSGSIKIWNLAVPTVQRTLNG---- 98 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~~i~~l~~h-~~~V~sLafS--pdg~~LaSg--s~DGtV~VWDl~tg~~v~~l~~---- 98 (845)
+.++++++.||.|.-.|..+|+...++... ..++....-. +.+..++.+ +.||.|..++..+|.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 357889999999999999999999988753 1233221100 112234433 5799999999998865554431
Q ss_pred CCCCeEE---EEE-----ccCCCEEEEEECCCeEEEEECCCCceEEEEcC
Q psy467 99 HKSSITS---VDF-----HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140 (845)
Q Consensus 99 h~~~V~~---laf-----spdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~ 140 (845)
...++.. ... ...+..+++|+.+|.+...|+.+|+.+..+..
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 1222221 000 01355789999999999999999999999864
No 330
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.54 E-value=1.6 Score=48.71 Aligned_cols=105 Identities=21% Similarity=0.227 Sum_probs=74.8
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCcEEEEEcCC----CCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc---------
Q psy467 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGH----KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG--------- 133 (845)
Q Consensus 67 Spdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h----~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~--------- 133 (845)
+.+|..++.+ .++.||.-++......+.+... ...|..+..+|+|++||..+ +..|.|..+..+.
T Consensus 29 ~~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 4466666666 4678888887754444554432 23688899999999998886 4578888886221
Q ss_pred ---eEEEEcC------CCCCeEEEEEec---CCCEEEEEeCCCcEEEeeeeccCCceeEEEECCC
Q psy467 134 ---CIYTYRG------HSKSINSIRFSP---DGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSL 186 (845)
Q Consensus 134 ---~l~~~~~------h~~~V~sLafSP---dg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~t 186 (845)
..+.+.- ...+|..+.|+| .+..|++-..|+.|++ ||+..
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~-------------yDl~~ 158 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITM-------------FDILN 158 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEE-------------EETTC
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEE-------------EEccc
Confidence 1223332 246799999999 4568999999999999 99986
No 331
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.46 E-value=3.3 Score=43.50 Aligned_cols=101 Identities=9% Similarity=0.022 Sum_probs=52.5
Q ss_pred EEEEEeCCCeEEEEECCCCeeEE-EecCCCCCeEEEEEcCCCCEEEEEEC----CC-------cEEEEECCCCcEEEEEc
Q psy467 30 VLATGGDDKKVNLWALGKSNCIM-SLSGHSTPVESVQFGNGEETLSAGCQ----SG-------SIKIWNLAVPTVQRTLN 97 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~-~l~~h~~~V~sLafSpdg~~LaSgs~----DG-------tV~VWDl~tg~~v~~l~ 97 (845)
+++.|+. .+..||..+.+-.. .+..........+...++..++.|+. ++ .+.++|..+++-.. +.
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG-LP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE-CS
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE-CC
Confidence 4444443 48899988776433 12211222233334456777788773 11 27788888765432 22
Q ss_pred CCCC--CeEEEEEccCCCEEEEEECC-------CeEEEEECCCCce
Q psy467 98 GHKS--SITSVDFHPYGDYLCSGSLD-------SFIKLWDLRRKGC 134 (845)
Q Consensus 98 ~h~~--~V~~lafspdg~~Lasgs~D-------G~I~IWDl~t~~~ 134 (845)
.... .-.+++.. +++.++.|+.+ ..+.+||..+.+-
T Consensus 95 ~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 139 (318)
T 2woz_A 95 PLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKW 139 (318)
T ss_dssp CBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEE
T ss_pred CCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCE
Confidence 1111 11122222 56666777754 2478888876643
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.19 E-value=1.7 Score=45.68 Aligned_cols=60 Identities=12% Similarity=0.052 Sum_probs=33.3
Q ss_pred EEEEEeCC-----CeEEEEECCCCeEEEE--ecCCCCCEEEEEEeCCCCEEEEEeCC-----C-EEEEEecCCce
Q psy467 294 LTTSSSAD-----RTVNFWDLEKFSLVST--TEKNSSTIRRLTFSEGGECLLGGDTE-----G-LKVYGWEPARQ 355 (845)
Q Consensus 294 lLatgs~D-----G~I~IWDl~s~~~l~t--l~gh~~~VtslafSpdG~~Lasgs~D-----G-I~IWDl~tgk~ 355 (845)
+++.|+.+ ..+.+||+.+.+-... +........++.+ ++++++.|+.+ . +.+||+.+.+-
T Consensus 171 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 171 LYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp EEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 56666544 4588999877643221 1111111222222 67777777653 3 88999887643
No 333
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.18 E-value=1.9 Score=45.37 Aligned_cols=125 Identities=10% Similarity=-0.033 Sum_probs=61.9
Q ss_pred eeeeEEeccCCCcEEEEEEecCCCCEEEEEeC-----C------CeEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCC
Q psy467 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGD-----D------KKVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEE 71 (845)
Q Consensus 5 lw~l~~L~gH~~~V~~LafSp~dg~~LaTgs~-----D------G~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~ 71 (845)
-|....+........+.+... ++.+++.|+. . ..+.+||..+.+-... +......-..+.+ ++.
T Consensus 24 ~W~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 100 (315)
T 4asc_A 24 ECYCASLSSQVPKNHVSLVTK-ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNS 100 (315)
T ss_dssp EEEEEECCCCSCSSEEEEECT-TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTE
T ss_pred eEecCCCCCCCCccceEEEEE-CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCE
Confidence 355444433222333333333 6788888873 1 1277888876543221 1111111112222 556
Q ss_pred EEEEEECC--------CcEEEEECCCCcEEEEEcCCCCCe-EEEEEccCCCEEEEEEC-C-----CeEEEEECCCCc
Q psy467 72 TLSAGCQS--------GSIKIWNLAVPTVQRTLNGHKSSI-TSVDFHPYGDYLCSGSL-D-----SFIKLWDLRRKG 133 (845)
Q Consensus 72 ~LaSgs~D--------GtV~VWDl~tg~~v~~l~~h~~~V-~~lafspdg~~Lasgs~-D-----G~I~IWDl~t~~ 133 (845)
.++.|+.+ ..+.+||..+++-...-....... .+++. -+++.++.|+. + ..+.+||..+.+
T Consensus 101 lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 101 IYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp EEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred EEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 66666632 468999998775332211111111 12222 35666677765 2 468899988764
No 334
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.04 E-value=5.4 Score=46.00 Aligned_cols=93 Identities=10% Similarity=0.176 Sum_probs=57.6
Q ss_pred CCCEEEEEe-CCCeEEEEECCCCeeEEEec-CCCCCeEEEEEc--CCCCEEEEEEC-------CCcE---------EE--
Q psy467 27 SGQVLATGG-DDKKVNLWALGKSNCIMSLS-GHSTPVESVQFG--NGEETLSAGCQ-------SGSI---------KI-- 84 (845)
Q Consensus 27 dg~~LaTgs-~DG~I~IWdl~t~~~i~~l~-~h~~~V~sLafS--pdg~~LaSgs~-------DGtV---------~V-- 84 (845)
+|++|+.-. .+..|-..++...++-+.+. .....+.+++|- |+..|+++++. ||.. .+
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~ 220 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN 220 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence 567777766 46688888988887766554 346678899986 68889888874 3331 11
Q ss_pred -EECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC
Q psy467 85 -WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL 120 (845)
Q Consensus 85 -WDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~ 120 (845)
.|.++.+....+.. .+..-.+...+++++.++.+.
T Consensus 221 ~iD~~tm~v~~Qv~v-~gnld~~~~~~~g~~af~t~y 256 (638)
T 3sbq_A 221 AIDAETMEMAFQVIV-DGNLDNTDADYTGRFAAATCY 256 (638)
T ss_dssp EEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEES
T ss_pred EEcCCccEEEEEEEc-CCChhhcCCCCCCCEEEEeee
Confidence 23333333333221 223344566777888777664
No 335
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.97 E-value=13 Score=44.08 Aligned_cols=144 Identities=13% Similarity=0.082 Sum_probs=85.1
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEE
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT 95 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~ 95 (845)
..|.++.... +| .|..|+.+| +..||..+.............|.++... ++ .|..++.+ .|..+|..+++....
T Consensus 63 ~~i~~i~~d~-~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~-~g-~lWigt~~-Gl~~~~~~~~~~~~~ 136 (758)
T 3ott_A 63 TRIYCGVIID-NT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQ-GD-TLWLGALN-GLYTYQLQSRKLTSF 136 (758)
T ss_dssp SCEEEEEEET-TT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEE-TT-EEEEEETT-EEEEEETTTCCEEEE
T ss_pred ceEEEEEEcC-CC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEec-CC-cEEEEcCC-cceeEeCCCCeEEEe
Confidence 4688888765 44 566676665 7899987764332111123457777653 44 56666655 688899887654332
Q ss_pred Ec----CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcC-----CCCCeEEEEEecCCCEEEEEeCCCcE
Q psy467 96 LN----GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-----HSKSINSIRFSPDGQWIASGGEDGVV 166 (845)
Q Consensus 96 l~----~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~-----h~~~V~sLafSPdg~~Lasgs~DG~I 166 (845)
.. .....|.++....++...+ |+.+ -|..++..+++....... ....|.++....++..|..|+.. -+
T Consensus 137 ~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~-Gl 213 (758)
T 3ott_A 137 DTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEG-YL 213 (758)
T ss_dssp CHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEE-EE
T ss_pred ccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECC-CC
Confidence 11 1234588888777776544 5554 477888876654321111 12247888888777655555543 46
Q ss_pred EE
Q psy467 167 RI 168 (845)
Q Consensus 167 ~I 168 (845)
..
T Consensus 214 ~~ 215 (758)
T 3ott_A 214 FQ 215 (758)
T ss_dssp EE
T ss_pred eE
Confidence 66
No 336
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.87 E-value=2.6 Score=47.55 Aligned_cols=111 Identities=8% Similarity=0.034 Sum_probs=66.1
Q ss_pred eEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee--EEEecC------CCCCeEEEEEcCC---CCEEEEE
Q psy467 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC--IMSLSG------HSTPVESVQFGNG---EETLSAG 76 (845)
Q Consensus 8 l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~--i~~l~~------h~~~V~sLafSpd---g~~LaSg 76 (845)
+..+...-..-++|+|.| +|+++++-...+.|++++..++.. +..+.. .......|+|+|+ +.+|..+
T Consensus 19 ~~~~a~~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 19 KKVILSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp EEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred EEEEECCCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 444444445678999999 898777654445788888655543 222321 2456789999995 5555444
Q ss_pred EC-------------CCcEEEEECCCC-------cEEE-EEcC-CCCCeEEEEEccCCCEEEEEE
Q psy467 77 CQ-------------SGSIKIWNLAVP-------TVQR-TLNG-HKSSITSVDFHPYGDYLCSGS 119 (845)
Q Consensus 77 s~-------------DGtV~VWDl~tg-------~~v~-~l~~-h~~~V~~lafspdg~~Lasgs 119 (845)
.. ...|.-|+...+ +.+. .+.. .......|+|.|||.+.++.+
T Consensus 98 ~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 98 GTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred EeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 32 235666665432 1111 1221 123468899999998776654
No 337
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.81 E-value=9.9 Score=43.88 Aligned_cols=91 Identities=10% Similarity=0.185 Sum_probs=63.9
Q ss_pred EEEEEeCCCeEEEEECCCCeeEEEecCC-------------------------CCCe--EEEEEc---CCCCEEEEEEC-
Q psy467 30 VLATGGDDKKVNLWALGKSNCIMSLSGH-------------------------STPV--ESVQFG---NGEETLSAGCQ- 78 (845)
Q Consensus 30 ~LaTgs~DG~I~IWdl~t~~~i~~l~~h-------------------------~~~V--~sLafS---pdg~~LaSgs~- 78 (845)
.+.+|+..|.|+|+-+.+++.++.+.-. .+.. -.+.+. .||+||+.-..
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 4667888999999999999998887411 1111 123333 26788888765
Q ss_pred CCcEEEEECCCCcEEEEEc-CCCCCeEEEEEc--cCCCEEEEEEC
Q psy467 79 SGSIKIWNLAVPTVQRTLN-GHKSSITSVDFH--PYGDYLCSGSL 120 (845)
Q Consensus 79 DGtV~VWDl~tg~~v~~l~-~h~~~V~~lafs--pdg~~Lasgs~ 120 (845)
...|...+++..++-+.+. .....+..++|- |+..|+++++.
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e 196 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAE 196 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEEC
T ss_pred CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecce
Confidence 5678889999887765553 245678888886 67788888774
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.75 E-value=4.4 Score=42.47 Aligned_cols=105 Identities=11% Similarity=0.072 Sum_probs=53.9
Q ss_pred CCCEEEEEeC----CC-------eEEEEECCCCeeEEE--ecCCCCCeEEEEEcCCCCEEEEEECC-------CcEEEEE
Q psy467 27 SGQVLATGGD----DK-------KVNLWALGKSNCIMS--LSGHSTPVESVQFGNGEETLSAGCQS-------GSIKIWN 86 (845)
Q Consensus 27 dg~~LaTgs~----DG-------~I~IWdl~t~~~i~~--l~~h~~~V~sLafSpdg~~LaSgs~D-------GtV~VWD 86 (845)
++.+++.|+. ++ .+.+||..+.+-... +......-..+.+ ++..++.|+.+ ..+.+||
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd 133 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYD 133 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEE
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEe
Confidence 6788888873 12 167788766543221 1111111222222 56666777653 3588889
Q ss_pred CCCCcEEEEEcCCCCCe-EEEEEccCCCEEEEEEC------CCeEEEEECCCCce
Q psy467 87 LAVPTVQRTLNGHKSSI-TSVDFHPYGDYLCSGSL------DSFIKLWDLRRKGC 134 (845)
Q Consensus 87 l~tg~~v~~l~~h~~~V-~~lafspdg~~Lasgs~------DG~I~IWDl~t~~~ 134 (845)
..+.+-...-....... .+++. .+++.++.|+. -..+.+||+.+.+-
T Consensus 134 ~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 134 PVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 88765433211111111 12222 35666666653 23589999987653
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.69 E-value=1.1 Score=47.88 Aligned_cols=55 Identities=4% Similarity=-0.086 Sum_probs=30.2
Q ss_pred eEEEEECCCC--eEEEEecCCCCCEEEEEEeCCCCEEEEEeCCC-------EEEEEecCCceEEEe
Q psy467 303 TVNFWDLEKF--SLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-------LKVYGWEPARQYDAQ 359 (845)
Q Consensus 303 ~I~IWDl~s~--~~l~tl~gh~~~VtslafSpdG~~Lasgs~DG-------I~IWDl~tgk~l~tl 359 (845)
.+.+||+.+. +.+..+......-. +..-++++++.|+.++ |.++++++++.+...
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~--~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGV--SLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSE--EEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eEEEEecCCCceeeCCCCCCCcccce--eEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 5778998754 44444443222222 2334778888888542 556688887766543
No 340
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.60 E-value=0.48 Score=48.41 Aligned_cols=143 Identities=12% Similarity=0.059 Sum_probs=84.6
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCee------EEEec--CCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC------IMSLS--GHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~------i~~l~--~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
..+.+++|+| +|.+.++ .+|.+.-.+..+... -..+- +-+. -.++.|.++|.+.++ .||.|.-++-
T Consensus 41 ~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 3778999999 9997777 677766655543211 11111 1111 368899999988777 5699988876
Q ss_pred CCCcE-------EEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCc------eEEEEc-CCCCCeEEEEEecC
Q psy467 88 AVPTV-------QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG------CIYTYR-GHSKSINSIRFSPD 153 (845)
Q Consensus 88 ~tg~~-------v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~------~l~~~~-~h~~~V~sLafSPd 153 (845)
.+... ...-...-..+..|.|.|+|.+.++. |+.+.-+...++. ....+. ..-.....+.|.++
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~ 192 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSV 192 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTT
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCC
Confidence 33110 11111122468999999999876666 7775443332111 111111 22234556779999
Q ss_pred CCEEEEEeCCCcEEE
Q psy467 154 GQWIASGGEDGVVRI 168 (845)
Q Consensus 154 g~~Lasgs~DG~I~I 168 (845)
+.+.++. ++.+.-
T Consensus 193 G~l~~v~--~g~~Y~ 205 (236)
T 1tl2_A 193 GTLFGVQ--GGKFYE 205 (236)
T ss_dssp SCEEEEE--TTEEEE
T ss_pred CcEEEEe--CCeEEe
Confidence 8877666 775544
No 341
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.34 E-value=13 Score=41.81 Aligned_cols=105 Identities=12% Similarity=0.212 Sum_probs=64.4
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEE--EEEcC------CCCCeEEEEEccC---CCEEEEEEC------
Q psy467 58 STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ--RTLNG------HKSSITSVDFHPY---GDYLCSGSL------ 120 (845)
Q Consensus 58 ~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v--~~l~~------h~~~V~~lafspd---g~~Lasgs~------ 120 (845)
-...+.|+|.|+|+++++-...+.|.+++..+++.. ..+.. .......|+|+|+ +..|+++..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 346789999999997776643457888887655432 23321 2355779999996 555655442
Q ss_pred -------CCeEEEEECCCC-------ceEE-EEcC-CCCCeEEEEEecCCCEEEEEeC
Q psy467 121 -------DSFIKLWDLRRK-------GCIY-TYRG-HSKSINSIRFSPDGQWIASGGE 162 (845)
Q Consensus 121 -------DG~I~IWDl~t~-------~~l~-~~~~-h~~~V~sLafSPdg~~Lasgs~ 162 (845)
...|.-|+.... +.+. .+.. .......|+|.|||.+.++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235666665322 1121 1221 2234688999999987776654
No 342
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.29 E-value=17 Score=38.45 Aligned_cols=127 Identities=9% Similarity=0.025 Sum_probs=72.8
Q ss_pred CCCEEEEEe--CCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECC--------------CcEEEEECCCC
Q psy467 27 SGQVLATGG--DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS--------------GSIKIWNLAVP 90 (845)
Q Consensus 27 dg~~LaTgs--~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~D--------------GtV~VWDl~tg 90 (845)
++.+++... .++.|...+.+... ...+... .+--+++++.+|+-+... ..|+..+++.+
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~ 98 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH 98 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence 556666654 24566666654333 3334321 234568889988877543 36777787766
Q ss_pred cEEEEEcCCCCCeEEEEEccCCCEEEEEE----CCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeC-CCc
Q psy467 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGS----LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE-DGV 165 (845)
Q Consensus 91 ~~v~~l~~h~~~V~~lafspdg~~Lasgs----~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~-DG~ 165 (845)
+...... . . +..|++++++|+-.. .+..|...++.. .....+..+.. .+++++++.|+-.+. ...
T Consensus 99 ~~~~l~~-~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~ 168 (302)
T 3s25_A 99 GSTVLDP-D--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQ 168 (302)
T ss_dssp CCEEEEC-S--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETTEEEEECTTTCC
T ss_pred cceEeec-C--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECCEEEEEeCCCce
Confidence 5333222 1 1 336788898888766 334566666653 33444443332 456777887775554 445
Q ss_pred EEE
Q psy467 166 VRI 168 (845)
Q Consensus 166 I~I 168 (845)
|..
T Consensus 169 Iy~ 171 (302)
T 3s25_A 169 LYR 171 (302)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
No 343
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=90.56 E-value=5.7 Score=42.24 Aligned_cols=64 Identities=6% Similarity=0.063 Sum_probs=33.0
Q ss_pred CCCEEEEEEC-CCcEEEEECCC-CcEEEEEcCCC--CC-eEEEEEccCCCEEEEEEC-C---------CeEEEEECCCCc
Q psy467 69 GEETLSAGCQ-SGSIKIWNLAV-PTVQRTLNGHK--SS-ITSVDFHPYGDYLCSGSL-D---------SFIKLWDLRRKG 133 (845)
Q Consensus 69 dg~~LaSgs~-DGtV~VWDl~t-g~~v~~l~~h~--~~-V~~lafspdg~~Lasgs~-D---------G~I~IWDl~t~~ 133 (845)
++..++.|+. ...+.++|..+ ......+.... .. -.+++. -+++.++.|+. + ..+.+||+.+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 4555555543 35688888864 12222332111 11 122222 25666666665 2 458899988764
No 344
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=88.01 E-value=16 Score=43.24 Aligned_cols=108 Identities=12% Similarity=0.091 Sum_probs=60.8
Q ss_pred CCCEEEEEeCC----CeEEEEECCCCeeEEEe-c-------CCCCCeEEEEEcCCCCEEEEEECC------CcEEEEECC
Q psy467 27 SGQVLATGGDD----KKVNLWALGKSNCIMSL-S-------GHSTPVESVQFGNGEETLSAGCQS------GSIKIWNLA 88 (845)
Q Consensus 27 dg~~LaTgs~D----G~I~IWdl~t~~~i~~l-~-------~h~~~V~sLafSpdg~~LaSgs~D------GtV~VWDl~ 88 (845)
++.+++.||.+ ..+.+||..+.+-...- . .....-.++.+..++..++.|+.+ +.+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 66788888753 35888888765433222 1 111122233332267777777653 358889998
Q ss_pred CCcEEEEEcCC-CCCeEEEEEccCCCEEEEEECCC--eEEEEECCCCce
Q psy467 89 VPTVQRTLNGH-KSSITSVDFHPYGDYLCSGSLDS--FIKLWDLRRKGC 134 (845)
Q Consensus 89 tg~~v~~l~~h-~~~V~~lafspdg~~Lasgs~DG--~I~IWDl~t~~~ 134 (845)
+.+-...-... ...-.+++...+++.++.|+.++ .+.+||..+..-
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W 525 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF 525 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCce
Confidence 76433221111 11112333334778888887654 689999987653
No 345
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=83.08 E-value=49 Score=34.73 Aligned_cols=128 Identities=6% Similarity=-0.006 Sum_probs=75.9
Q ss_pred EEEecCCCCEEEEEeCC--------------CeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEE--C--CCcE
Q psy467 21 LALGKKSGQVLATGGDD--------------KKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC--Q--SGSI 82 (845)
Q Consensus 21 LafSp~dg~~LaTgs~D--------------G~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs--~--DGtV 82 (845)
--+++ +|++|+.+... ..|+..+++..+... +.. .. +..|++++++|+-.. . ...|
T Consensus 58 ~~i~~-~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 58 MYINA-DKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEE-CSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeEEE-cCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceE
Confidence 34567 77777766542 367777776655333 321 11 236788899988776 2 3455
Q ss_pred EEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEEC-CCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEe
Q psy467 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL-DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG 161 (845)
Q Consensus 83 ~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~-DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs 161 (845)
..-+++... ...+..+.. .+|+++++.|+-.+. ...|.+.++..+.....+. +... ..++|++.+|+-..
T Consensus 132 y~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~ 202 (302)
T 3s25_A 132 YRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMD 202 (302)
T ss_dssp EEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEE
T ss_pred EEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEE
Confidence 556666433 344443332 456778888876665 5788888887655443333 2222 34668888877665
Q ss_pred CC
Q psy467 162 ED 163 (845)
Q Consensus 162 ~D 163 (845)
.+
T Consensus 203 ~~ 204 (302)
T 3s25_A 203 VN 204 (302)
T ss_dssp GG
T ss_pred cC
Confidence 43
No 346
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=81.37 E-value=2.7 Score=42.95 Aligned_cols=133 Identities=11% Similarity=0.034 Sum_probs=76.1
Q ss_pred CCEEEEEeCCCeEEEEECCCCe------eEEEecC-CCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcE------EE
Q psy467 28 GQVLATGGDDKKVNLWALGKSN------CIMSLSG-HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTV------QR 94 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t~~------~i~~l~~-h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~------v~ 94 (845)
..+|++...| +++.=...++. ...++-. -=..+.+++|+|+|.+.++ .+|.+.-.+..+... -.
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCE
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccccc
Confidence 3456666666 55444333332 1222221 1236779999999986666 677766666544111 12
Q ss_pred EEc--CCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceE------EEE-cCCCCCeEEEEEecCCCEEEEEeCCCc
Q psy467 95 TLN--GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI------YTY-RGHSKSINSIRFSPDGQWIASGGEDGV 165 (845)
Q Consensus 95 ~l~--~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l------~~~-~~h~~~V~sLafSPdg~~Lasgs~DG~ 165 (845)
.+- +-. ...++.|.|+|.+.++ .||.|.-++-.+...- ..+ ...=..+..|.+.|+|.+.++. |+.
T Consensus 81 ~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ 155 (236)
T 1tl2_A 81 KIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ 155 (236)
T ss_dssp EEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred Eecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc
Confidence 221 111 1468899999987776 5698887775332111 111 1111467899999999977766 776
Q ss_pred EEE
Q psy467 166 VRI 168 (845)
Q Consensus 166 I~I 168 (845)
++-
T Consensus 156 lyr 158 (236)
T 1tl2_A 156 FYK 158 (236)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=71.24 E-value=9.5 Score=41.27 Aligned_cols=107 Identities=7% Similarity=-0.025 Sum_probs=67.8
Q ss_pred CEEEEEECCCcEEEEECCCCcEEEEEcCC-CCCeEEEEE--ccCCCEEEEE--ECCCeEEEEECCCCceEEEEcC----C
Q psy467 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGH-KSSITSVDF--HPYGDYLCSG--SLDSFIKLWDLRRKGCIYTYRG----H 141 (845)
Q Consensus 71 ~~LaSgs~DGtV~VWDl~tg~~v~~l~~h-~~~V~~laf--spdg~~Lasg--s~DG~I~IWDl~t~~~l~~~~~----h 141 (845)
..++.++.||.|.-+|..+|+...++... ..++....- .+.+..++.+ +.||.|..++..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46888999999999999999999998754 122222110 0112244444 5899999999988865544431 1
Q ss_pred CCCeEE---EEE-e----cCCCEEEEEeCCCcEEEeeeeccCCceeEEEECCCCccC
Q psy467 142 SKSINS---IRF-S----PDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL 190 (845)
Q Consensus 142 ~~~V~s---Laf-S----Pdg~~Lasgs~DG~I~I~~~~~~~~~~I~vWDl~tg~~l 190 (845)
..++.. ... . ..+..+++|+.+|.+.. .|+.+|+.+
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~a-------------ld~~tG~~~ 134 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYT-------------INMLNGEII 134 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEE-------------EETTTCCEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEE-------------EECCCCcEE
Confidence 122221 000 0 03557788888888888 888888873
No 348
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=71.21 E-value=1.1e+02 Score=32.49 Aligned_cols=151 Identities=11% Similarity=0.051 Sum_probs=92.3
Q ss_pred CcEEEEEEecC--CCCEEEEEeCCCeEEEEECCC-------CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 16 ASVNCLALGKK--SGQVLATGGDDKKVNLWALGK-------SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 16 ~~V~~LafSp~--dg~~LaTgs~DG~I~IWdl~t-------~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
..|.++..-++ +..++++.+.+|.|+.-.+.. +.....+.. .+.+..+........|+..+..|.+..+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 45555544331 467999999999999987643 222223343 45566666666667888888999998887
Q ss_pred CC--CC---------cEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-------ceEEEEc--CCCCCeE
Q psy467 87 LA--VP---------TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-------GCIYTYR--GHSKSIN 146 (845)
Q Consensus 87 l~--tg---------~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-------~~l~~~~--~h~~~V~ 146 (845)
.. .- .....+. ....|.++...+++.+++..+..|.++.-.+... +-+..++ ...+.+.
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv 252 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLV 252 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEE
T ss_pred CcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEE
Confidence 76 21 1111222 2345777666666778999999999998876421 1222222 2234455
Q ss_pred EEEEecCCCEEEEEeCCCcEEE
Q psy467 147 SIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 147 sLafSPdg~~Lasgs~DG~I~I 168 (845)
.+....+...++..+.+|.+.-
T Consensus 253 ~~~~~~~~~~i~l~T~~G~~ir 274 (327)
T 3uc1_A 253 GALIVDDDSELYAVTSGGGVIR 274 (327)
T ss_dssp EEEEECTTCEEEEEEGGGCEEE
T ss_pred EEEEeCCCccEEEEcCCCeEEE
Confidence 5544444455666667776655
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=70.49 E-value=66 Score=37.92 Aligned_cols=106 Identities=15% Similarity=0.174 Sum_probs=59.4
Q ss_pred CCCEEEEEeCC------CeEEEEECCCCeeEE--EecCCCCCeEEEEEcCCCCEEEEEECCC--cEEEEECCCCcEEEEE
Q psy467 27 SGQVLATGGDD------KKVNLWALGKSNCIM--SLSGHSTPVESVQFGNGEETLSAGCQSG--SIKIWNLAVPTVQRTL 96 (845)
Q Consensus 27 dg~~LaTgs~D------G~I~IWdl~t~~~i~--~l~~h~~~V~sLafSpdg~~LaSgs~DG--tV~VWDl~tg~~v~~l 96 (845)
++.+++.||.+ ..+.+||..+.+-.. .+......- +++...++..++.|+.++ .+.+||..+++-...-
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 45677777643 357888887643221 111111111 222323778888887654 7999999887533221
Q ss_pred c-----CCCCCeEEEEEccC-CCEEEEEEC--C-----CeEEEEECCCCc
Q psy467 97 N-----GHKSSITSVDFHPY-GDYLCSGSL--D-----SFIKLWDLRRKG 133 (845)
Q Consensus 97 ~-----~h~~~V~~lafspd-g~~Lasgs~--D-----G~I~IWDl~t~~ 133 (845)
. .......++.+..+ ++.++.|+. + ..+.+||+.+..
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 1 11222233555555 566677765 2 458899998766
No 350
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=70.40 E-value=1e+02 Score=31.76 Aligned_cols=139 Identities=14% Similarity=0.130 Sum_probs=71.4
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEE
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l 96 (845)
.|..++... . ..++. . ||.|..|-......+..-......|..++...+. .++. . ||.|..|-.....++-.-
T Consensus 25 ~i~~ia~G~-~-h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGY-F-HGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECS-S-EEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCC-C-eEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 577777753 2 23333 5 8999999764322111111123356666665432 2333 4 899999987543211111
Q ss_pred cCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 97 NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 97 ~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
..-...|..++...+ ..+.-. ||.|..|-......+-........|..++...+ +.+.-. ||.+..
T Consensus 98 ~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~ 163 (282)
T 3qhy_B 98 AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIA 163 (282)
T ss_dssp GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEE
T ss_pred cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEE
Confidence 111235666665533 444445 999999976543222111112345666655432 222333 688887
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=69.63 E-value=1.5e+02 Score=33.20 Aligned_cols=112 Identities=10% Similarity=0.000 Sum_probs=63.9
Q ss_pred EEeccCCCcEEEEEEecCCCC-EEEEEeCCCeEEEEECCCC---eeEEEec---------CCCCCeEEEEEcCC----CC
Q psy467 9 EDFMAHGASVNCLALGKKSGQ-VLATGGDDKKVNLWALGKS---NCIMSLS---------GHSTPVESVQFGNG----EE 71 (845)
Q Consensus 9 ~~L~gH~~~V~~LafSp~dg~-~LaTgs~DG~I~IWdl~t~---~~i~~l~---------~h~~~V~sLafSpd----g~ 71 (845)
..+..--..-+.|+|.| +|+ .|+++...|.|++++.... ..+..+. ........|+|+|+ +.
T Consensus 7 ~~va~gL~~P~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~ 85 (463)
T 2wg3_C 7 QEVVSGLRQPVGALHSG-DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK 85 (463)
T ss_dssp EEEEEEESSEEEEECCS-SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE
T ss_pred EEeccCCCCceEEEECC-CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCE
Confidence 33333334678999999 775 4555677899999975422 1222221 11456889999996 33
Q ss_pred EEEEEEC--C----------CcEEEEECCC----------CcEEEEEc--CCCCCeEEEEEccCCCEEEEEECC
Q psy467 72 TLSAGCQ--S----------GSIKIWNLAV----------PTVQRTLN--GHKSSITSVDFHPYGDYLCSGSLD 121 (845)
Q Consensus 72 ~LaSgs~--D----------GtV~VWDl~t----------g~~v~~l~--~h~~~V~~lafspdg~~Lasgs~D 121 (845)
+.++-+. + ..|.-|.+.. .+.+..+. ........|+|.|||.+.++.+..
T Consensus 86 lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 86 LYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp EEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred EEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 3333322 1 1444566542 12333332 122346789999999877665543
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=63.26 E-value=1.6e+02 Score=31.37 Aligned_cols=147 Identities=10% Similarity=0.001 Sum_probs=73.5
Q ss_pred CCcEEEEEEecCCCCEEEEEeCCC----eEEEEECCCCeeEEEecC--------------CCCCeEEEEEcC-C-CCEEE
Q psy467 15 GASVNCLALGKKSGQVLATGGDDK----KVNLWALGKSNCIMSLSG--------------HSTPVESVQFGN-G-EETLS 74 (845)
Q Consensus 15 ~~~V~~LafSp~dg~~LaTgs~DG----~I~IWdl~t~~~i~~l~~--------------h~~~V~sLafSp-d-g~~La 74 (845)
...|.+|++.|.+...|.+++..| .|...+ +.++.-..+.. +...|.++++.| + ...|.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 357999999874444455555444 343332 23332222211 112577899987 2 45566
Q ss_pred EEECCCcEEEEECCCCcEEEEEcC-------------------CCCCeEEEEEccC-CCEEEEEECCCeEEEEECCCCce
Q psy467 75 AGCQSGSIKIWNLAVPTVQRTLNG-------------------HKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGC 134 (845)
Q Consensus 75 Sgs~DGtV~VWDl~tg~~v~~l~~-------------------h~~~V~~lafspd-g~~Lasgs~DG~I~IWDl~t~~~ 134 (845)
+++..+.|...+ +.++....+.. ....+.+|.++|. ...++.+..++.|...+ ..++.
T Consensus 133 ~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~t 210 (394)
T 3b7f_A 133 AGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTD 210 (394)
T ss_dssp EEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSS
T ss_pred EEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCC
Confidence 665556554432 22332222211 1235788999883 34555555444443332 22222
Q ss_pred EEEEcC-C------------CCCeEEEEEecC-CCEEEEEeCCC
Q psy467 135 IYTYRG-H------------SKSINSIRFSPD-GQWIASGGEDG 164 (845)
Q Consensus 135 l~~~~~-h------------~~~V~sLafSPd-g~~Lasgs~DG 164 (845)
-..+.. . ...+.++.++|+ ...|.++...+
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 222211 0 124788999985 45666666544
No 353
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=61.33 E-value=1.8e+02 Score=31.40 Aligned_cols=139 Identities=10% Similarity=0.019 Sum_probs=84.6
Q ss_pred CCCEEEEEeCCCeEEEEECCC---------CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC---C-----
Q psy467 27 SGQVLATGGDDKKVNLWALGK---------SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA---V----- 89 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t---------~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~---t----- 89 (845)
+..++++.+.+|.|+--.+.+ +.....+. ..+.+..+........|+..+..|.+.-+... .
T Consensus 6 ~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a 84 (370)
T 3l6v_A 6 PEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNA 84 (370)
T ss_dssp CCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTS
T ss_pred CCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCccc
Confidence 678999999999998765421 22333444 45667777666667778888888887766542 1
Q ss_pred -CcEEE---EEcCCCCCeEEEEEcc---CCCEEEEEECCCeEEEEECCCC-------ceEEEEcCCCCCeEEEEEecCCC
Q psy467 90 -PTVQR---TLNGHKSSITSVDFHP---YGDYLCSGSLDSFIKLWDLRRK-------GCIYTYRGHSKSINSIRFSPDGQ 155 (845)
Q Consensus 90 -g~~v~---~l~~h~~~V~~lafsp---dg~~Lasgs~DG~I~IWDl~t~-------~~l~~~~~h~~~V~sLafSPdg~ 155 (845)
|..+. .+. ....|.++.... ++.+|+.++..|.++...+... .....++. ...+..+.......
T Consensus 85 ~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~ 162 (370)
T 3l6v_A 85 RGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDR 162 (370)
T ss_dssp CCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCC
T ss_pred CCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCc
Confidence 22111 122 233455544332 4568999999999999887432 11222332 34555555555556
Q ss_pred EEEEEeCCCcEEE
Q psy467 156 WIASGGEDGVVRI 168 (845)
Q Consensus 156 ~Lasgs~DG~I~I 168 (845)
.++..+.+|.+..
T Consensus 163 ~i~l~T~~G~~ir 175 (370)
T 3l6v_A 163 DVLLFASNGKTVR 175 (370)
T ss_dssp EEEEEETTSEEEE
T ss_pred eEEEEeCCCeEEE
Confidence 6777788887766
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=58.96 E-value=2.2e+02 Score=31.65 Aligned_cols=106 Identities=15% Similarity=0.161 Sum_probs=61.8
Q ss_pred CCeEEEEEcCCCC-EEEEEECCCcEEEEECCCC---cEEEEEc---------CCCCCeEEEEEccC---CCEEEEE-EC-
Q psy467 59 TPVESVQFGNGEE-TLSAGCQSGSIKIWNLAVP---TVQRTLN---------GHKSSITSVDFHPY---GDYLCSG-SL- 120 (845)
Q Consensus 59 ~~V~sLafSpdg~-~LaSgs~DGtV~VWDl~tg---~~v~~l~---------~h~~~V~~lafspd---g~~Lasg-s~- 120 (845)
..-+.|+|.|++. .|+++...|.|++++.... ..+..+. ........|+|+|+ +.+|++. +.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3567899999996 4555568899999975432 1222221 11356788999996 3344332 22
Q ss_pred -C----------CeEEEEECCC----------CceEEEEc--CCCCCeEEEEEecCCCEEEEEeCCC
Q psy467 121 -D----------SFIKLWDLRR----------KGCIYTYR--GHSKSINSIRFSPDGQWIASGGEDG 164 (845)
Q Consensus 121 -D----------G~I~IWDl~t----------~~~l~~~~--~h~~~V~sLafSPdg~~Lasgs~DG 164 (845)
+ ..|.-|.+.. .+.+..+. .....-..|+|.|||.+.++.+..+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 1455566542 12333332 2223457899999998777766544
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=58.92 E-value=1.1e+02 Score=37.47 Aligned_cols=39 Identities=15% Similarity=0.142 Sum_probs=34.2
Q ss_pred CCeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEc
Q psy467 59 TPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLN 97 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~ 97 (845)
..+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 357788888888999999999999999999999988763
No 356
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=56.45 E-value=1.8e+02 Score=29.88 Aligned_cols=147 Identities=11% Similarity=0.052 Sum_probs=87.3
Q ss_pred CCcEEEEEEecC-CCCEEEEEeCCCeEEEEECCCC------eeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 15 GASVNCLALGKK-SGQVLATGGDDKKVNLWALGKS------NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 15 ~~~V~~LafSp~-dg~~LaTgs~DG~I~IWdl~t~------~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
...|.++.. ++ +..+++..+.+|.++-..+.+- .....+. ..+.+..+........|+..+..|.+..+..
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSV 144 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEh
Confidence 445666644 32 4578999999999999886542 2222233 2456666666666678888889999888876
Q ss_pred CC---------CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC-------CceEEEEcCCCCCeEEEEEe
Q psy467 88 AV---------PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-------KGCIYTYRGHSKSINSIRFS 151 (845)
Q Consensus 88 ~t---------g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t-------~~~l~~~~~h~~~V~sLafS 151 (845)
.. |.....+. ....|..+...+++..++..+..|.++...+.. ++-+..+ ...+.+..+...
T Consensus 145 ~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~ 222 (276)
T 3no0_A 145 REVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPI 222 (276)
T ss_dssp GGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEE
T ss_pred hhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEe
Confidence 32 21212233 234566665556677899999999999888742 2222233 233445444333
Q ss_pred cCCCEEEEEeCCCc
Q psy467 152 PDGQWIASGGEDGV 165 (845)
Q Consensus 152 Pdg~~Lasgs~DG~ 165 (845)
.+...++..+.+|.
T Consensus 223 ~~~~~i~~~t~~G~ 236 (276)
T 3no0_A 223 KEEVELLITTKNGK 236 (276)
T ss_dssp SSEEEEEEEETTSC
T ss_pred CCCCEEEEEcCCCe
Confidence 33334555555554
No 357
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=51.06 E-value=2.3e+02 Score=29.50 Aligned_cols=139 Identities=10% Similarity=0.036 Sum_probs=77.2
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeEE---------EecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECC---C-----
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNCIM---------SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA---V----- 89 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~i~---------~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~---t----- 89 (845)
+..++++.+.+|.|+--.+.+-+... .+. ..+.+..+........|+..+..|.+.-.... .
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~k-e~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIK-EEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 45678888999999877664322211 122 23445555555556677777788886665542 2
Q ss_pred -CcEEE---EEcCCCCCeEEEEEc---cCCCEEEEEECCCeEEEEECCCC-------ceEEEEcCCCCCeEEEEEecCCC
Q psy467 90 -PTVQR---TLNGHKSSITSVDFH---PYGDYLCSGSLDSFIKLWDLRRK-------GCIYTYRGHSKSINSIRFSPDGQ 155 (845)
Q Consensus 90 -g~~v~---~l~~h~~~V~~lafs---pdg~~Lasgs~DG~I~IWDl~t~-------~~l~~~~~h~~~V~sLafSPdg~ 155 (845)
|..+. .+. ....|..+... .++.+++..+.+|.++...+... .....+..+ ..+..+....+..
T Consensus 81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGED 158 (307)
T ss_dssp CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTC
T ss_pred CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCC
Confidence 22111 122 23345555432 34568999999999999877421 111223333 4555555554455
Q ss_pred EEEEEeCCCcEEE
Q psy467 156 WIASGGEDGVVRI 168 (845)
Q Consensus 156 ~Lasgs~DG~I~I 168 (845)
.++..+.+|.+..
T Consensus 159 ~i~l~T~~G~~ir 171 (307)
T 1zi0_A 159 EVMLFSAEGKVVR 171 (307)
T ss_dssp EEEEEETTSEEEE
T ss_pred EEEEECCCCcEEE
Confidence 6777777787766
No 358
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=50.20 E-value=1.3e+02 Score=37.09 Aligned_cols=38 Identities=32% Similarity=0.342 Sum_probs=33.1
Q ss_pred CeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc
Q psy467 102 SITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR 139 (845)
Q Consensus 102 ~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~ 139 (845)
.+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46677788888899999999999999999999987764
No 359
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=49.32 E-value=2.6e+02 Score=29.71 Aligned_cols=138 Identities=9% Similarity=-0.086 Sum_probs=67.1
Q ss_pred CCEEEEEeCCCeEEEEECCC-CeeEEEe--cCCCCCeEEEEEcC-CCCEEEEEECCC----cEEEEECCCCcEEEEEcC-
Q psy467 28 GQVLATGGDDKKVNLWALGK-SNCIMSL--SGHSTPVESVQFGN-GEETLSAGCQSG----SIKIWNLAVPTVQRTLNG- 98 (845)
Q Consensus 28 g~~LaTgs~DG~I~IWdl~t-~~~i~~l--~~h~~~V~sLafSp-dg~~LaSgs~DG----tV~VWDl~tg~~v~~l~~- 98 (845)
...|.+|+..| +.+++... +.....+ ......|.+|++.| +...|.+++..| .|... .+.++....+..
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~ 99 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRP 99 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBC
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCcc
Confidence 44677787777 55554332 2222221 12345799999998 333344444444 33332 233332222221
Q ss_pred -------------CCCCeEEEEEccC--CCEEEEEECCCeEEEEECCCCceEEEEcC-------------------CCCC
Q psy467 99 -------------HKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGCIYTYRG-------------------HSKS 144 (845)
Q Consensus 99 -------------h~~~V~~lafspd--g~~Lasgs~DG~I~IWDl~t~~~l~~~~~-------------------h~~~ 144 (845)
....|.++++.|. ...+++++..+.|...+- .++.-..+.. ....
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 1124778888872 455666665565544422 2222112211 1235
Q ss_pred eEEEEEecC-CCEEEEEeCCCcEEE
Q psy467 145 INSIRFSPD-GQWIASGGEDGVVRI 168 (845)
Q Consensus 145 V~sLafSPd-g~~Lasgs~DG~I~I 168 (845)
+.+|.++|. ...++.+..++.+..
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~ 203 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFE 203 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEE
Confidence 788999873 444555544444443
No 360
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=44.45 E-value=4.7e+02 Score=31.06 Aligned_cols=159 Identities=11% Similarity=0.110 Sum_probs=84.7
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCC-------CCCeEEEEEcCC-CCEEEEEE
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGH-------STPVESVQFGNG-EETLSAGC 77 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h-------~~~V~sLafSpd-g~~LaSgs 77 (845)
|+...+ .-.+.|.+|+++|.+...+++++..+.|...+ +.++.-..+..+ ...|.+|+++|. .+.++.+.
T Consensus 6 W~~~~~-~~~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 6 FKNVAI-GGGGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp EEECCC-CBCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred ceEccC-CCCCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 444333 33568999999996667777787777766555 334433334332 246999999984 34454444
Q ss_pred CCCc----EEEEE-CCCCcEEEEEcCC-------C--CCeEEEEEccCC-CEEEEEECCCeEEEEECCC-CceEEEEcC-
Q psy467 78 QSGS----IKIWN-LAVPTVQRTLNGH-------K--SSITSVDFHPYG-DYLCSGSLDSFIKLWDLRR-KGCIYTYRG- 140 (845)
Q Consensus 78 ~DGt----V~VWD-l~tg~~v~~l~~h-------~--~~V~~lafspdg-~~Lasgs~DG~I~IWDl~t-~~~l~~~~~- 140 (845)
.+.. -.||. .+.|+.-..+... . ..+..++++|.. +.++.+...+. ||-..+ ++.=..+..
T Consensus 84 g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~ 161 (789)
T 1sqj_A 84 GRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSI 161 (789)
T ss_dssp CSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTS
T ss_pred CccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccC
Confidence 3211 33443 3444444333210 1 135678888753 45666653443 333322 221112211
Q ss_pred -----CCCCeEEEEEec-CCCEEEEEeCC-CcEEE
Q psy467 141 -----HSKSINSIRFSP-DGQWIASGGED-GVVRI 168 (845)
Q Consensus 141 -----h~~~V~sLafSP-dg~~Lasgs~D-G~I~I 168 (845)
....+..+.++| ++..++++..+ +.|..
T Consensus 162 ~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~ 196 (789)
T 1sqj_A 162 PDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYV 196 (789)
T ss_dssp CCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEE
T ss_pred ccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEE
Confidence 124578899988 44556666554 44443
No 361
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=43.48 E-value=2.9e+02 Score=28.35 Aligned_cols=157 Identities=10% Similarity=-0.034 Sum_probs=94.5
Q ss_pred eEEeccCC---CcEEEEEEecCCCCEEEEEeCCCeEEEE---ECCCCeeEEEecCCCCCeEEEEEcC-CCCEEEEEECCC
Q psy467 8 AEDFMAHG---ASVNCLALGKKSGQVLATGGDDKKVNLW---ALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSG 80 (845)
Q Consensus 8 l~~L~gH~---~~V~~LafSp~dg~~LaTgs~DG~I~IW---dl~t~~~i~~l~~h~~~V~sLafSp-dg~~LaSgs~DG 80 (845)
++..++|. +.+.++.... +.+.|+..+.+|.++-- ++........+. ....|..+.... +..+++..+.+|
T Consensus 13 ir~~~g~~~~gD~~~~~~~~~-t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G 90 (276)
T 3no0_A 13 IIPVEELPLEKAPVVNILRVP-FTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKG 90 (276)
T ss_dssp EEEGGGCCSSCCCEEEEEEEE-TTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTS
T ss_pred eeeccCCCCCCCeEEEEEEEC-CCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCC
Confidence 34556663 4566666665 56667777788877643 333221111133 355676664421 567899999999
Q ss_pred cEEEEECCCCc------EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCC---------CceEEEEcCCCCCe
Q psy467 81 SIKIWNLAVPT------VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR---------KGCIYTYRGHSKSI 145 (845)
Q Consensus 81 tV~VWDl~tg~------~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t---------~~~l~~~~~h~~~V 145 (845)
.++-..+.... ....+. ....+..+........++..+..|.+..++... |.....+. ....|
T Consensus 91 ~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~v 168 (276)
T 3no0_A 91 YVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDET 168 (276)
T ss_dssp EEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCE
T ss_pred EEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEE
Confidence 99999876532 111222 234555555555566888899999988887632 11212222 23456
Q ss_pred EEEEEecCCCEEEEEeCCCcEEE
Q psy467 146 NSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 146 ~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.++...+++..++..+..|.++.
T Consensus 169 v~~~~~~~~~~ll~~T~~G~~kr 191 (276)
T 3no0_A 169 SGLRIWNGEPYLLVITAKGRVKK 191 (276)
T ss_dssp EEEEEESSCSEEEEEETTSCEEE
T ss_pred EEEEEeCCCCEEEEEeCCCcEEE
Confidence 66655556667888888888777
No 362
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=42.40 E-value=3.3e+02 Score=28.73 Aligned_cols=148 Identities=11% Similarity=0.072 Sum_probs=88.6
Q ss_pred cEEEEEEecCCCCEEEEEeCCCeEEEEE---CCC------CeeEEE---ecCCCCCeEEEEEcC---CCCEEEEEECCCc
Q psy467 17 SVNCLALGKKSGQVLATGGDDKKVNLWA---LGK------SNCIMS---LSGHSTPVESVQFGN---GEETLSAGCQSGS 81 (845)
Q Consensus 17 ~V~~LafSp~dg~~LaTgs~DG~I~IWd---l~t------~~~i~~---l~~h~~~V~sLafSp---dg~~LaSgs~DGt 81 (845)
.+..+.... +.+.|+.-+..|.++-.. +.. |..+.. +. ....|.++..-. +..+++..+.+|.
T Consensus 43 ~~~~~~~~~-t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~ 120 (327)
T 3uc1_A 43 IVAHFFVCS-THDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGL 120 (327)
T ss_dssp CEEEEEEEE-TTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSE
T ss_pred EEEEEEEeC-CCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCE
Confidence 455554444 566677777777765443 322 222211 22 244566554433 5789999999999
Q ss_pred EEEEECCCCc-------EEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECC--CCc---------eEEEEcCCCC
Q psy467 82 IKIWNLAVPT-------VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR--RKG---------CIYTYRGHSK 143 (845)
Q Consensus 82 V~VWDl~tg~-------~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~--t~~---------~l~~~~~h~~ 143 (845)
|+--.+.... ....+.. ...+..+........++..+..|.+..+... .-. ....+. ...
T Consensus 121 iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d 198 (327)
T 3uc1_A 121 VKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDD 198 (327)
T ss_dssp EEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTC
T ss_pred EEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCC
Confidence 9998875422 1122332 3445555555556788888999998888766 211 111222 234
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 144 SINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 144 ~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.|.++...+++.+++.++..|.++.
T Consensus 199 ~Vv~~~~~~~~~~ll~~T~~G~~Kr 223 (327)
T 3uc1_A 199 RLLSLNVVREGTYLLVATSGGYAKR 223 (327)
T ss_dssp CEEEEEECCTTCEEEEEETTSEEEE
T ss_pred EEEEEEEECCCCEEEEEeCCCcEEE
Confidence 5766666666678888889998887
No 363
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=41.73 E-value=3e+02 Score=28.09 Aligned_cols=100 Identities=15% Similarity=0.094 Sum_probs=52.4
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc
Q psy467 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR 139 (845)
Q Consensus 60 ~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~ 139 (845)
.|..++.... ..+.-. ||.|..|-.....++..-......|..++...+- .++. . ||.|..|-......+-.-.
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~ 98 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPA 98 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCG
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCc
Confidence 5666665433 333334 8999999865432111111122356666654332 3333 4 8999999765432221111
Q ss_pred CCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 140 GHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 140 ~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
.....|..++... .+.+... ||.++.
T Consensus 99 ~~~~~v~~ia~G~--~hs~al~-~G~v~~ 124 (282)
T 3qhy_B 99 EARSGVDAIAAGA--WASYALK-DGKVIA 124 (282)
T ss_dssp GGSSSEEEEEEET--TEEEEEE-TTEEEE
T ss_pred ccCCCeEEEECcC--CEEEEEe-CCeEEE
Confidence 1234577777663 3344445 888888
No 364
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=41.31 E-value=2.1e+02 Score=35.85 Aligned_cols=38 Identities=32% Similarity=0.342 Sum_probs=32.0
Q ss_pred CeEEEEEccCCCEEEEEECCCeEEEEECCCCceEEEEc
Q psy467 102 SITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR 139 (845)
Q Consensus 102 ~V~~lafspdg~~Lasgs~DG~I~IWDl~t~~~l~~~~ 139 (845)
.+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34556667788899999999999999999999988764
No 365
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=40.58 E-value=3.2e+02 Score=31.54 Aligned_cols=61 Identities=15% Similarity=0.202 Sum_probs=43.0
Q ss_pred CCeEEEEEcCCCCEEEEEEC------------CCcEEEEECCCCcEEEEEcCC-CCCeEEEEEccCCCEEEEEE
Q psy467 59 TPVESVQFGNGEETLSAGCQ------------SGSIKIWNLAVPTVQRTLNGH-KSSITSVDFHPYGDYLCSGS 119 (845)
Q Consensus 59 ~~V~sLafSpdg~~LaSgs~------------DGtV~VWDl~tg~~v~~l~~h-~~~V~~lafspdg~~Lasgs 119 (845)
.....|.|.++|.+.++... .+.|..++..+++....+... ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45678999999987664321 125667777778766666532 45789999999999887653
No 366
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=35.31 E-value=6.1e+02 Score=29.78 Aligned_cols=80 Identities=3% Similarity=0.003 Sum_probs=46.1
Q ss_pred CCCeEEEEECCCC-------eEEEE-ecC-CCCCEEEEEEeCCCCEEEEEeCCC---EEEEEecCCc-eEEE-ecCC-CC
Q psy467 300 ADRTVNFWDLEKF-------SLVST-TEK-NSSTIRRLTFSEGGECLLGGDTEG---LKVYGWEPAR-QYDA-QPMG-WG 364 (845)
Q Consensus 300 ~DG~I~IWDl~s~-------~~l~t-l~g-h~~~VtslafSpdG~~Lasgs~DG---I~IWDl~tgk-~l~t-l~~h-~~ 364 (845)
..+.|...|+.++ ..... +.. ....+..+.|..+ .++++...++ |.++++.+++ .... +... .+
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~ 396 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQN 396 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTT
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCe
Confidence 4566777776542 11222 222 2346778888876 5777777777 7888887774 2333 3222 34
Q ss_pred CeEEEEEc-CCceEEEE
Q psy467 365 KVQDLAVT-GTQLWFRR 380 (845)
Q Consensus 365 ~VtsVafS-dg~lLaaS 380 (845)
.+....++ ++..++..
T Consensus 397 ~~~~~~~~~~~~~~~~~ 413 (711)
T 4hvt_A 397 AIFGMSSYEEEEEALIT 413 (711)
T ss_dssp CEEEEECCTTCSCEEEE
T ss_pred EEEEEeecCcCCEEEEE
Confidence 57666666 55544444
No 367
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=34.31 E-value=4.2e+02 Score=27.58 Aligned_cols=139 Identities=9% Similarity=0.054 Sum_probs=81.7
Q ss_pred CCCEEEEEeCCCeEEEEECCCCee-------E--EEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEECCC---Cc---
Q psy467 27 SGQVLATGGDDKKVNLWALGKSNC-------I--MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV---PT--- 91 (845)
Q Consensus 27 dg~~LaTgs~DG~I~IWdl~t~~~-------i--~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl~t---g~--- 91 (845)
+..++++.+.+|.|+--.+..-+. + ..+. ..+.+..+........++..+..|.++-..... ..
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 566888999999998876543211 1 1122 234555655555667788888899877766532 11
Q ss_pred ---E---EEEEcCCCCCeEEEEEcc---CCCEEEEEECCCeEEEEECCC-------CceEEEEcCCCCCeEEEEEecCCC
Q psy467 92 ---V---QRTLNGHKSSITSVDFHP---YGDYLCSGSLDSFIKLWDLRR-------KGCIYTYRGHSKSINSIRFSPDGQ 155 (845)
Q Consensus 92 ---~---v~~l~~h~~~V~~lafsp---dg~~Lasgs~DG~I~IWDl~t-------~~~l~~~~~h~~~V~sLafSPdg~ 155 (845)
. ...+. ....|.++...+ ++.+++..+..|.++...+.. |.....+.. ...+..+....++.
T Consensus 86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 0 00122 123344443332 467888999999999888743 222222332 45566665555556
Q ss_pred EEEEEeCCCcEEE
Q psy467 156 WIASGGEDGVVRI 168 (845)
Q Consensus 156 ~Lasgs~DG~I~I 168 (845)
.++..+.+|.+..
T Consensus 164 ~i~l~T~~G~~~r 176 (312)
T 1suu_A 164 KVICLSKKGSAFI 176 (312)
T ss_dssp EEEEEETTSEEEE
T ss_pred EEEEEeCCCcEEE
Confidence 6777888888777
No 368
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=34.23 E-value=83 Score=39.50 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=32.4
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEc
Q psy467 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLN 97 (845)
Q Consensus 60 ~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~ 97 (845)
.+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566677788999999999999999999999988754
No 369
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=33.91 E-value=31 Score=33.36 Aligned_cols=48 Identities=19% Similarity=0.328 Sum_probs=41.1
Q ss_pred eehhhhHhH----------HHHHHHhhhcccchhHHHHHHHHHHHHHhhchhhhcccc
Q psy467 784 WNLELCSAI----------LPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMK 831 (845)
Q Consensus 784 ~~l~~~~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 831 (845)
.+||+|-.| +-.|..-|++++..-...||+.|-.+++++|.-+|.-+.
T Consensus 33 ~ileicD~I~~~~~~~k~A~ral~krl~~~n~~vql~AL~LLd~~vkNCG~~Fh~eva 90 (171)
T 1juq_A 33 YIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVG 90 (171)
T ss_dssp HHHHHHHHHHHSTTHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHT
T ss_pred HHHHHHHHHHcCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHh
Confidence 367888775 678889999999999999999999999999998886443
No 370
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=33.73 E-value=6.4e+02 Score=29.51 Aligned_cols=114 Identities=11% Similarity=0.027 Sum_probs=62.0
Q ss_pred eeeEEeccCCCcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecCC-------CCCeEEEEEcC-CCCEEEEEE
Q psy467 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGH-------STPVESVQFGN-GEETLSAGC 77 (845)
Q Consensus 6 w~l~~L~gH~~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~h-------~~~V~sLafSp-dg~~LaSgs 77 (845)
|+.....+-.+.|.+|+++|.+...+.++...+.|..++- .++.-..+..+ ...|.+|+++| +.+.++++.
T Consensus 13 w~~~~~~~~~g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 13 WDNVVIGGGGGFMPGIVFNETEKDLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp EEEECCCSBCSCCCEEEECSSSTTCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred eEEcccCCCcceeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 4444444444489999999966566777776666665552 33333333322 24699999998 334444443
Q ss_pred CC-------CcEEEEECCC-CcEEEEEc-CC--------CCCeEEEEEccCC-CEEEEEEC
Q psy467 78 QS-------GSIKIWNLAV-PTVQRTLN-GH--------KSSITSVDFHPYG-DYLCSGSL 120 (845)
Q Consensus 78 ~D-------GtV~VWDl~t-g~~v~~l~-~h--------~~~V~~lafspdg-~~Lasgs~ 120 (845)
.. +...||.... |+.-..+. .. ...+..|+++|.. +.++.+..
T Consensus 92 ~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 92 GMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred cccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 21 1244554433 33222221 11 0124678999854 56666653
No 371
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=32.78 E-value=4.4e+02 Score=27.35 Aligned_cols=151 Identities=9% Similarity=0.038 Sum_probs=88.5
Q ss_pred CcEEEEEEec--CCCCEEEEEeCCCeEEEEECCC-------CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 16 ASVNCLALGK--KSGQVLATGGDDKKVNLWALGK-------SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 16 ~~V~~LafSp--~dg~~LaTgs~DG~I~IWdl~t-------~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
..|.++..-+ .++.+++..+.+|.++-..+.. +.....+..+ +.+..+....+...|+..+.+|.+..++
T Consensus 95 e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~ 173 (307)
T 1zi0_A 95 ERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFK 173 (307)
T ss_dssp CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEE
Confidence 3455554321 2456888999999999987642 2222233333 5666666655666788888999988887
Q ss_pred CCC---------CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECCCC-------c--eEEEEcCCCCCeEEE
Q psy467 87 LAV---------PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK-------G--CIYTYRGHSKSINSI 148 (845)
Q Consensus 87 l~t---------g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~t~-------~--~l~~~~~h~~~V~sL 148 (845)
... |.....+. ....|.++....++..+++.+..|.++-.++..- + ....+....+.+..+
T Consensus 174 ~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~ 252 (307)
T 1zi0_A 174 ESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGA 252 (307)
T ss_dssp GGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEE
T ss_pred HHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEE
Confidence 642 11111222 2345666655555667889999999988877321 1 112222233555555
Q ss_pred EEecCCCEEEEEeCCCcEEE
Q psy467 149 RFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 149 afSPdg~~Lasgs~DG~I~I 168 (845)
....+...++..+.+|.+.-
T Consensus 253 ~~v~~~~~l~~~t~~g~~ir 272 (307)
T 1zi0_A 253 VQVDDCDQIMMITDAGTLVR 272 (307)
T ss_dssp EEECTTCEEEEEESSCCEEE
T ss_pred EEeCCCceEEEEcCCCcEEE
Confidence 44334455556666666555
No 372
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=32.77 E-value=5.1e+02 Score=28.06 Aligned_cols=151 Identities=9% Similarity=0.048 Sum_probs=86.9
Q ss_pred CcEEEEEEecCCCCEEEEEeC---------------CCeEEEEECCCC--eeEEEecC------CCCCeEEEEEc---CC
Q psy467 16 ASVNCLALGKKSGQVLATGGD---------------DKKVNLWALGKS--NCIMSLSG------HSTPVESVQFG---NG 69 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~---------------DG~I~IWdl~t~--~~i~~l~~------h~~~V~sLafS---pd 69 (845)
-.|..+...+ ++++-+.=+. --+|.+||+.+. +.++++.- ....+..+++. ++
T Consensus 87 vsV~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~ 165 (381)
T 3q6k_A 87 TSIYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPK 165 (381)
T ss_dssp SCEEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTT
T ss_pred EEeeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCC
Confidence 3677788776 5554443211 126889999999 88887752 24468888887 22
Q ss_pred ----CCEEEEEE-CCCcEEEEECCCCcEEEEEcC----C--------------CCCeEEEEEccC----CCEEEEEECCC
Q psy467 70 ----EETLSAGC-QSGSIKIWNLAVPTVQRTLNG----H--------------KSSITSVDFHPY----GDYLCSGSLDS 122 (845)
Q Consensus 70 ----g~~LaSgs-~DGtV~VWDl~tg~~v~~l~~----h--------------~~~V~~lafspd----g~~Lasgs~DG 122 (845)
+.++..+. ..+.|.|+|+.+++..+.+.. . ...+..|+.+|+ ++.|+-....+
T Consensus 166 ~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss 245 (381)
T 3q6k_A 166 GDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA 245 (381)
T ss_dssp TTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC
T ss_pred CCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC
Confidence 33444443 367899999999877665521 0 135778888887 67776665544
Q ss_pred eEEEEECC-----CCc---eEEEEc--CCCCCeEEEEEe-cCCCEEEEEeCCCcEEE
Q psy467 123 FIKLWDLR-----RKG---CIYTYR--GHSKSINSIRFS-PDGQWIASGGEDGVVRI 168 (845)
Q Consensus 123 ~I~IWDl~-----t~~---~l~~~~--~h~~~V~sLafS-Pdg~~Lasgs~DG~I~I 168 (845)
. ++|.+. ... .+..+- +....-..++++ .+|.++++--....|..
T Consensus 246 ~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~ 301 (381)
T 3q6k_A 246 I-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSC 301 (381)
T ss_dssp S-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEE
T ss_pred C-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEE
Confidence 2 333332 111 111111 111223345554 45665555556666777
No 373
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=30.41 E-value=1.2e+02 Score=35.31 Aligned_cols=58 Identities=14% Similarity=0.088 Sum_probs=41.9
Q ss_pred ceeEEEcCCCCcccceEEEEEeCC------------CeEEEEECCCCeEEEEecCC-CCCEEEEEEeCCCCEEEEE
Q psy467 278 RTSLSILPQSPMLCFILTTSSSAD------------RTVNFWDLEKFSLVSTTEKN-SSTIRRLTFSEGGECLLGG 340 (845)
Q Consensus 278 I~slafSPdg~~~~~~lLatgs~D------------G~I~IWDl~s~~~l~tl~gh-~~~VtslafSpdG~~Lasg 340 (845)
.-.|+|+|+|. ++++-..+ +.+.+.+..+++...-+.++ ...++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~-----LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGR-----LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCC-----EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCC-----EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 35789999998 55554322 34667777778776666554 4579999999999988775
No 374
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=29.84 E-value=1.8e+02 Score=34.44 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=30.0
Q ss_pred CeEEEEEcCCCCEEEEEECCCcEEEEECCCCcEEEEEcC
Q psy467 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG 98 (845)
Q Consensus 60 ~V~sLafSpdg~~LaSgs~DGtV~VWDl~tg~~v~~l~~ 98 (845)
.|.++.+ +..+|++-+.|+++++|++.+++++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555554 467999999999999999999998877653
No 375
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=28.83 E-value=5.1e+02 Score=26.88 Aligned_cols=112 Identities=15% Similarity=0.087 Sum_probs=72.4
Q ss_pred cEEEEEEecC--CCCEEEEEeCCCeEEEEECCC-------CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEEC
Q psy467 17 SVNCLALGKK--SGQVLATGGDDKKVNLWALGK-------SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87 (845)
Q Consensus 17 ~V~~LafSp~--dg~~LaTgs~DG~I~IWdl~t-------~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWDl 87 (845)
.|.++...++ +..+|+..+.+|.++...+.. |.....+.. .+.+..+....++..++..+.+|.+..+..
T Consensus 101 ~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~ 179 (312)
T 1suu_A 101 EILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNS 179 (312)
T ss_dssp CEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEG
T ss_pred EEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEH
Confidence 4444433321 356788889999999887632 222333443 566777666655677888889999999887
Q ss_pred CC---------CcEEEEEcCCCCCeEEEEEccCCCEEEEEECCCeEEEEECC
Q psy467 88 AV---------PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130 (845)
Q Consensus 88 ~t---------g~~v~~l~~h~~~V~~lafspdg~~Lasgs~DG~I~IWDl~ 130 (845)
.. |.....+. ....|..+....++..+++.+..|..+..++.
T Consensus 180 ~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 180 RDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp GGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred HHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 53 11122232 23456666555566778889999999988874
No 376
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=28.71 E-value=47 Score=31.25 Aligned_cols=47 Identities=15% Similarity=0.200 Sum_probs=39.8
Q ss_pred ehhhhHhH----------HHHHHHhhhcccchhHHHHHHHHHHHHHhhchhhhcccc
Q psy467 785 NLELCSAI----------LPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMK 831 (845)
Q Consensus 785 ~l~~~~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 831 (845)
+||+|=.| +..|..-|++++..-...||+.|-.+++++|+-+|.-+.
T Consensus 22 ~leicD~I~~~~~~~k~a~rai~krl~~~n~~vql~AL~LLe~~vkNCG~~fh~eva 78 (148)
T 1mhq_A 22 IQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVA 78 (148)
T ss_dssp HHHHHHHHHHSSHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHT
T ss_pred HHHHHHHHHcCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHh
Confidence 56777654 567888899999999999999999999999999886554
No 377
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=27.76 E-value=50 Score=31.57 Aligned_cols=48 Identities=15% Similarity=0.236 Sum_probs=39.9
Q ss_pred eehhhhHhH----------HHHHHHhhhcccchhHHHHHHHHHHHHHhhchhhhcccc
Q psy467 784 WNLELCSAI----------LPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMK 831 (845)
Q Consensus 784 ~~l~~~~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 831 (845)
.+|++|-.| +-.|..-|++++..=...||+.|-.+++++|+.+|.-+.
T Consensus 35 ~~leicD~I~~~~~~~keA~ral~krl~~~n~~vql~AL~LLd~~vkNcG~~Fh~eva 92 (163)
T 1x5b_A 35 LIMDICDKVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVC 92 (163)
T ss_dssp HHHHHHHHHHHSSSHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHTCHHHHHHHT
T ss_pred HHHHHHHHHhCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 367888765 567888899999988889999999999999998886443
No 378
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=26.10 E-value=15 Score=33.44 Aligned_cols=56 Identities=18% Similarity=0.305 Sum_probs=42.8
Q ss_pred cCChhHHHHHHHhcCCceeeeehhhhhccchhhhHH-----HHHhhhhhhHHHhhcccccccc
Q psy467 479 NKNMEAGIDTALSMNDGTVMIDLFKSMLGQGYKKCV-----KVYNALMPVKSVLLKKQTVQGK 536 (845)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kc~-----~c~~~l~~~~~~~~~~~~~~g~ 536 (845)
.+-++.||++|..-.|..++=||+++|+..+...|= .||..|.. .++++.+=+-|-
T Consensus 32 DkLykDAietAa~S~d~elaEeLL~yFVe~g~kEcF~A~LytCYdLlrp--DvVLElaWr~~l 92 (125)
T 3qil_A 32 DSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRP--DVVLELAWRHNI 92 (125)
T ss_dssp CCCSSHHHHTTTSSCCSHHHHHHHHHHTTSCSHHHHHHHHHHHTTCSCT--THHHHTTSSSSC
T ss_pred cccHHHHHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHHHhccCh--HHHHHHHHHhcc
Confidence 566889999999999999999999999998887774 58877654 334444444443
No 379
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=25.30 E-value=2e+02 Score=33.32 Aligned_cols=62 Identities=13% Similarity=0.043 Sum_probs=43.9
Q ss_pred ccCceeEEEcCCCCcccceEEE-EEeC-----------CCeEEEEECCCCeEEEEecCC-CCCEEEEEEeCCCCEEEEEe
Q psy467 275 SVSRTSLSILPQSPMLCFILTT-SSSA-----------DRTVNFWDLEKFSLVSTTEKN-SSTIRRLTFSEGGECLLGGD 341 (845)
Q Consensus 275 ~~~I~slafSPdg~~~~~~lLa-tgs~-----------DG~I~IWDl~s~~~l~tl~gh-~~~VtslafSpdG~~Lasgs 341 (845)
......|+|.++|. +.+ +-.. .+.|..++..+++....+.+. ...++.++||||++.|+++-
T Consensus 475 fnsPDnL~fd~~G~-----LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 475 FNSPDGLGFDKAGR-----LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCCEEEEEECTTCC-----EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred cCCCCceEECCCCC-----EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 34557899999998 444 3221 226778888788776655543 35689999999999988764
No 380
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=24.67 E-value=1e+02 Score=36.55 Aligned_cols=38 Identities=13% Similarity=0.276 Sum_probs=31.5
Q ss_pred CcEEEEEEecCCCCEEEEEeCCCeEEEEECCCCeeEEEecC
Q psy467 16 ASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSG 56 (845)
Q Consensus 16 ~~V~~LafSp~dg~~LaTgs~DG~I~IWdl~t~~~i~~l~~ 56 (845)
..|.|+.+ +..++++-+.|.++++|++.++.++....-
T Consensus 222 ~~Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF---HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE---TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc---CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 45777666 467999999999999999999998877654
No 381
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=23.74 E-value=1.7e+02 Score=33.96 Aligned_cols=59 Identities=15% Similarity=0.214 Sum_probs=41.6
Q ss_pred CeEEEEEcCCCCEEEEEECC------------CcEEEEECCCCcEEEEEcCC-CCCeEEEEEccCCCEEEEE
Q psy467 60 PVESVQFGNGEETLSAGCQS------------GSIKIWNLAVPTVQRTLNGH-KSSITSVDFHPYGDYLCSG 118 (845)
Q Consensus 60 ~V~sLafSpdg~~LaSgs~D------------GtV~VWDl~tg~~v~~l~~h-~~~V~~lafspdg~~Lasg 118 (845)
..-.|+|++.|.++++-..+ +.+.+.+..+++..+.+.+. ..+++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45678999999866654321 23556677777766666543 4689999999999887765
No 382
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=23.66 E-value=7e+02 Score=26.71 Aligned_cols=151 Identities=9% Similarity=0.058 Sum_probs=85.3
Q ss_pred CcEEEEEEec--CCCCEEEEEeCCCeEEEEECCC-------CeeEEEecCCCCCeEEEEEcCCCCEEEEEECCCcEEEEE
Q psy467 16 ASVNCLALGK--KSGQVLATGGDDKKVNLWALGK-------SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86 (845)
Q Consensus 16 ~~V~~LafSp--~dg~~LaTgs~DG~I~IWdl~t-------~~~i~~l~~h~~~V~sLafSpdg~~LaSgs~DGtV~VWD 86 (845)
..|.++..-. ....+|+.++..|.++...+.. +.....+.. .+.+..+........|+..+.+|.+..++
T Consensus 99 e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf~ 177 (370)
T 3l6v_A 99 ERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRFG 177 (370)
T ss_dssp CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEEE
Confidence 4555554432 1456899999999999887632 222223332 45566666655666788888899888887
Q ss_pred CCC---------CcEEEEEcCCCCCeEEEEEcc-----------------------------------CCCEEEEEECCC
Q psy467 87 LAV---------PTVQRTLNGHKSSITSVDFHP-----------------------------------YGDYLCSGSLDS 122 (845)
Q Consensus 87 l~t---------g~~v~~l~~h~~~V~~lafsp-----------------------------------dg~~Lasgs~DG 122 (845)
... |.....+. ....|.++...+ ++..+++.+..|
T Consensus 178 ~~~v~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G 256 (370)
T 3l6v_A 178 ESTVRSMGRTATGVRGIRLA-KGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENG 256 (370)
T ss_dssp GGGSCBCCTTCCCEECCCCC-TTCCEEEEEEECCC-----------------------------------CEEEEEETTS
T ss_pred ccccCccCCCCCCeeeEEeC-CCCEEEEEEEeccccccccccccccccccccccccccccccccccccCCceEEEeeCCC
Confidence 642 11111122 223455544443 346889999999
Q ss_pred eEEEEECCCC-------ceEE--EEcCCCCCeEEEEEecCCCEEEEEeCCCcEEE
Q psy467 123 FIKLWDLRRK-------GCIY--TYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168 (845)
Q Consensus 123 ~I~IWDl~t~-------~~l~--~~~~h~~~V~sLafSPdg~~Lasgs~DG~I~I 168 (845)
..+...+..- +-+. .+....+.+..+.+..+...++..+..|.+.-
T Consensus 257 ~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR 311 (370)
T 3l6v_A 257 YGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVR 311 (370)
T ss_dssp EEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEE
T ss_pred CEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEE
Confidence 9988887421 1122 22223345555544444445555566665544
No 383
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=22.01 E-value=7.7e+02 Score=26.59 Aligned_cols=121 Identities=10% Similarity=0.104 Sum_probs=70.7
Q ss_pred cEEEEEE-ecCCCCEEEEEeC--C---CeEEEEECC--------CCeeEEEecC-----CCCCeEEEEEcCCCCEEEE--
Q psy467 17 SVNCLAL-GKKSGQVLATGGD--D---KKVNLWALG--------KSNCIMSLSG-----HSTPVESVQFGNGEETLSA-- 75 (845)
Q Consensus 17 ~V~~Laf-Sp~dg~~LaTgs~--D---G~I~IWdl~--------t~~~i~~l~~-----h~~~V~sLafSpdg~~LaS-- 75 (845)
-.+.++. +. +++++++--. + -++...+.. ++..+.-+.. +--.|..+...+++.+-+.
T Consensus 27 ~P~gv~vd~~-~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~~~rLWVLDt 105 (381)
T 3q6k_A 27 ISTAFAYDAE-GEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDDCRRLWVVDI 105 (381)
T ss_dssp CCCEEEEETT-TTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECTTCEEEEEEC
T ss_pred ceeeeeeecC-CCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcCCCcEEEEeC
Confidence 3456777 45 6777776532 2 245444432 1122133322 2346788888776654332
Q ss_pred EE-------------CCCcEEEEECCCC--cEEEEEcCC------CCCeEEEEEc---cC----CCEEEEEE-CCCeEEE
Q psy467 76 GC-------------QSGSIKIWNLAVP--TVQRTLNGH------KSSITSVDFH---PY----GDYLCSGS-LDSFIKL 126 (845)
Q Consensus 76 gs-------------~DGtV~VWDl~tg--~~v~~l~~h------~~~V~~lafs---pd----g~~Lasgs-~DG~I~I 126 (845)
|- ..-.|.+||+.++ +.++++.-. ...+..+++. |. +.+++.+. ..+-|.+
T Consensus 106 G~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIV 185 (381)
T 3q6k_A 106 GSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFI 185 (381)
T ss_dssp SSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEE
T ss_pred CCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEE
Confidence 10 0125889999999 888887521 3457788887 22 34555554 4567999
Q ss_pred EECCCCceEEEE
Q psy467 127 WDLRRKGCIYTY 138 (845)
Q Consensus 127 WDl~t~~~l~~~ 138 (845)
+|+.+++.-+..
T Consensus 186 ydl~~~~swRv~ 197 (381)
T 3q6k_A 186 YDHKKQDSWNVT 197 (381)
T ss_dssp EETTTTEEEEEE
T ss_pred EECCCCcEEEEc
Confidence 999988766544
No 384
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=21.09 E-value=1e+03 Score=27.77 Aligned_cols=111 Identities=13% Similarity=0.081 Sum_probs=56.5
Q ss_pred EEEEE-EecCCCCEEEEE-eCC----CeEEEEECCCCeeEEE-ec-CCCC------CeEEEEEcCCCCEEEEEE------
Q psy467 18 VNCLA-LGKKSGQVLATG-GDD----KKVNLWALGKSNCIMS-LS-GHST------PVESVQFGNGEETLSAGC------ 77 (845)
Q Consensus 18 V~~La-fSp~dg~~LaTg-s~D----G~I~IWdl~t~~~i~~-l~-~h~~------~V~sLafSpdg~~LaSgs------ 77 (845)
...+. ++| ++++++.+ +.. ..++++|+.+++.+.. +. .-+. ....++|..+ +.++.+.
T Consensus 131 ~~g~~~~~~-~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~~ 208 (711)
T 4hvt_A 131 YRGVSNCFQ-NPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKNE 208 (711)
T ss_dssp EEEEEECSS-STTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEET-TEEEECCCCSTTC
T ss_pred EeceeecCC-CCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECC-CEEEEEeCCCCCC
Confidence 34444 677 77777765 222 3699999999887631 11 0000 0134477643 4444332
Q ss_pred -----CCCcEEEEECCCC--cEEEEEcCCCCCe-EEEEEccCCCE-----EEEEECC---CeEEEEECC
Q psy467 78 -----QSGSIKIWNLAVP--TVQRTLNGHKSSI-TSVDFHPYGDY-----LCSGSLD---SFIKLWDLR 130 (845)
Q Consensus 78 -----~DGtV~VWDl~tg--~~v~~l~~h~~~V-~~lafspdg~~-----Lasgs~D---G~I~IWDl~ 130 (845)
....|+.|.+-+. +-...+.+....+ .....++++++ +++.+.+ ..+.+.|..
T Consensus 209 ~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 277 (711)
T 4hvt_A 209 ITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTK 277 (711)
T ss_dssp BCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECS
T ss_pred cCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCC
Confidence 1256888888664 2233343333332 23445666652 3443322 345666654
No 385
>2rfe_E ERBB receptor feedback inhibitor 1; kinase domain, inhibition, dimer, peptide, alternative splicing, anti-oncogene, ATP-binding, cell cycle; 2.90A {Homo sapiens} PDB: 2rfd_C
Probab=20.37 E-value=40 Score=24.29 Aligned_cols=24 Identities=50% Similarity=0.713 Sum_probs=6.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccceecccC
Q psy467 642 SRGSSRTASPRRTLPPASPSYSTGSVDMATT 672 (845)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (845)
|++.+||.||+- .|+|-.|. |.+|
T Consensus 2 Sq~~sRtpSP~~-----lp~y~s~~--mp~T 25 (40)
T 2rfe_E 2 SPSNSRTPSPKS-----LPSYLNGV--MPPT 25 (40)
T ss_dssp -----------C-----CCCCTTSC--CCSC
T ss_pred CCCCCCCCCCcc-----Cccccccc--cCcc
Confidence 567889999982 47776643 4444
Done!