Your job contains 1 sequence.
>psy467
MRAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP
VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL
DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIH
VVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQA
GEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSA
DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQP
MGWGKVQDLAVTGTQLWFRRVGTWSHQDSGFSTLDSYSAGSPVSTMGRERDQIVPMNLSA
PIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAVLRNRQRSLGLVYMAVNNK
NMEAGIDTALSMNDGTVMIDLFKSMLGQGYKKCVKVYNALMPVKSVLLKKQTVQGKLGQT
FRDLLAEIEGLTEGSLTAKFLSSRNLREKEDRIGESQPFRGRTLSVQDKIYFGFDFRSGQ
SLSSTFFENFALNIDIVRLNSGGVSELNNISKLYISSPSPASRGSSRTASPRRTLPPASP
SYSTGSVDMATTSPHPLPRKPLERDVDELVYISPFGQEKPSVDFEVPTKESEIYPTYVRK
GPDMYGPQSQYAPTKENDYGSQSGDSMLGDHEAETHEPSRYSMKPIPYSPSTPREYAKEP
DNVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVD
ISKEE
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy467
(845 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 533 7.5e-99 4
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 533 9.6e-99 4
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 533 9.6e-99 4
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 533 2.0e-98 4
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 519 3.0e-98 4
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 533 3.2e-98 4
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 519 1.4e-96 4
UNIPROTKB|E3W9A3 - symbol:KATNB1 "Katanin p80 WD40 repeat... 519 1.4e-96 4
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 513 8.0e-87 3
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 474 2.6e-86 4
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 533 5.7e-74 4
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 539 1.6e-70 3
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 538 1.8e-70 3
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 493 1.3e-63 3
FB|FBgn0040207 - symbol:kat80 "katanin 80" species:7227 "... 378 3.6e-57 4
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 533 1.3e-53 2
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 537 1.5e-53 2
UNIPROTKB|F1RF38 - symbol:KATNB1 "Uncharacterized protein... 215 1.7e-34 3
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 262 3.3e-22 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 247 3.8e-22 2
UNIPROTKB|H3BT67 - symbol:KATNB1 "Katanin p80 WD40 repeat... 261 2.3e-21 1
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 268 2.4e-19 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 230 2.5e-19 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 223 3.1e-19 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 230 4.2e-19 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 218 2.4e-18 2
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 213 2.5e-18 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 223 3.0e-18 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 223 3.0e-18 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 223 3.0e-18 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 223 3.0e-18 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 223 3.0e-18 2
FB|FBgn0025724 - symbol:beta'Cop "beta'-coatomer protein"... 254 7.4e-18 1
UNIPROTKB|J9P0X5 - symbol:KATNB1 "Uncharacterized protein... 167 8.2e-18 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 234 9.3e-18 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 219 1.0e-17 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 210 1.2e-17 2
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 238 1.4e-17 3
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 225 1.7e-17 1
UNIPROTKB|E1C016 - symbol:COPB2 "Uncharacterized protein"... 250 2.0e-17 1
ZFIN|ZDB-GENE-010724-7 - symbol:copb2 "coatomer protein c... 250 2.1e-17 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 213 2.4e-17 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 221 2.7e-17 2
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 256 2.9e-17 2
UNIPROTKB|G8JKX8 - symbol:COPB2 "Coatomer subunit beta'" ... 246 3.5e-17 1
ZFIN|ZDB-GENE-050417-160 - symbol:wdr38 "WD repeat domain... 221 4.4e-17 1
UNIPROTKB|B4DZI8 - symbol:COPB2 "Coatomer protein complex... 246 5.1e-17 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 210 5.3e-17 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 210 5.3e-17 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 210 5.3e-17 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 210 5.3e-17 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 210 5.3e-17 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 210 5.3e-17 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 210 5.3e-17 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 210 5.3e-17 2
MGI|MGI:1354962 - symbol:Copb2 "coatomer protein complex,... 246 5.3e-17 1
UNIPROTKB|P35605 - symbol:COPB2 "Coatomer subunit beta'" ... 246 5.3e-17 1
UNIPROTKB|E2R667 - symbol:COPB2 "Uncharacterized protein"... 246 5.3e-17 1
UNIPROTKB|P35606 - symbol:COPB2 "Coatomer subunit beta'" ... 246 5.3e-17 1
UNIPROTKB|F1SL54 - symbol:COPB2 "Uncharacterized protein"... 246 5.3e-17 1
UNIPROTKB|H3BTU7 - symbol:KATNB1 "Katanin p80 WD40 repeat... 168 6.0e-17 3
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 214 6.2e-17 2
TAIR|locus:2016214 - symbol:AT1G79990 species:3702 "Arabi... 259 6.6e-17 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 226 8.0e-17 2
RGD|628746 - symbol:Copb2 "coatomer protein complex, subu... 244 8.8e-17 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 208 9.0e-17 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 234 1.0e-16 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 234 1.0e-16 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 207 1.2e-16 2
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 233 1.2e-16 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 215 1.8e-16 2
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 227 2.2e-16 2
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 213 2.4e-16 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 206 2.8e-16 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 213 3.9e-16 2
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 236 4.0e-16 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 227 5.1e-16 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 224 6.2e-16 2
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 210 7.8e-16 3
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 224 8.8e-16 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 202 9.8e-16 2
UNIPROTKB|H3BTV8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 208 1.1e-15 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 204 1.1e-15 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 210 1.3e-15 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 207 1.4e-15 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 235 1.4e-15 3
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 224 1.6e-15 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 217 1.7e-15 2
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 207 1.8e-15 2
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 230 1.8e-15 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 220 1.9e-15 2
SGD|S000003105 - symbol:SEC27 "Essential beta'-coat prote... 228 2.0e-15 2
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 221 2.1e-15 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 218 2.2e-15 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 214 2.4e-15 2
DICTYBASE|DDB_G0278285 - symbol:copB2 "coatomer protein c... 238 3.3e-15 2
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 207 3.3e-15 2
CGD|CAL0004039 - symbol:orf19.3301 species:5476 "Candida ... 226 3.7e-15 2
UNIPROTKB|Q6PBD6 - symbol:wdr61 "WD repeat-containing pro... 205 3.7e-15 2
MGI|MGI:1913972 - symbol:Spag16 "sperm associated antigen... 229 4.4e-15 2
WARNING: Descriptions of 1177 database sequences were not reported due to the
limiting value of parameter V = 100.
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 533 (192.7 bits), Expect = 7.5e-99, Sum P(4) = 7.5e-99
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG+++ SGS D+ IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ YRGHS+++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
Score = 226 (84.6 bits), Expect = 2.7e-36, Sum P(3) = 2.7e-36
Identities = 83/273 (30%), Positives = 118/273 (43%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
+ H +V CL G+ LA+ DD V LW L + GH+ PV V+F E
Sbjct: 143 YRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF-IKLWDL 129
L++G +I+ W+L V + G + SV F+P G L SG DS + W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189
R C + + + D IG +F +N S +VVDL+ V
Sbjct: 262 ER--CFDVVLVNWGKVADLAICNDQL------------IGVAFSQSNVSSYVVDLTRVTR 307
Query: 190 LGT---PPPQ----YTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE----- 237
GT P Q T P + SLR+ + RP T +K R++ N+ESE
Sbjct: 308 TGTVTQDPVQANQPLTQQTP-NPGVSLRRIYE--RPSTTCSKPQ--RVKHNSESERRSPS 362
Query: 238 --DQAGEEELFATIANPCDYSAIFQPHRSLNRS 268
D E E A I N DY+ IFQP S++R+
Sbjct: 363 SEDDRDERESRAEIQNAEDYNEIFQPKNSISRT 395
Score = 222 (83.2 bits), Expect = 7.7e-36, Sum P(3) = 7.7e-36
Identities = 44/154 (28%), Positives = 74/154 (48%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
M H A++ C G+ +A+G D + LW + + C+ GHS V ++F +
Sbjct: 102 MGHKANI-CSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
L++ ++K+W+L + GH + V+FHP L SGS D I+ WDL +
Sbjct: 161 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
+ G + S+ F+PDG + SG +D +
Sbjct: 221 FQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 254
Score = 213 (80.0 bits), Expect = 7.5e-99, Sum P(4) = 7.5e-99
Identities = 40/83 (48%), Positives = 51/83 (61%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S+DRT+ FWDLEKF +VS E +R + F+ G CL G + L+VYGWEP
Sbjct: 203 LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPE 262
Query: 354 RQYDAQPMGWGKVQDLAVTGTQL 376
R +D + WGKV DLA+ QL
Sbjct: 263 RCFDVVLVNWGKVADLAICNDQL 285
Score = 190 (71.9 bits), Expect = 3.8e-50, Sum P(4) = 3.8e-50
Identities = 40/154 (25%), Positives = 73/154 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + V + L +++ G + +W L + + +L GH + S+ F E +
Sbjct: 62 HTSPVESVRLNTPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G Q +IK+W++ GH ++ + F P G +L S + D +KLWDL
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
+ + GH+ +N + F P+ +ASG D +R
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Score = 165 (63.1 bits), Expect = 7.5e-99, Sum P(4) = 7.5e-99
Identities = 32/64 (50%), Positives = 47/64 (73%)
Query: 782 NVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVDI 841
++W L+LC+ +LP I+ LLQSKYE Y+ T C +L LIL+ F P+I + + + S+GVDI
Sbjct: 552 SLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILA-APPSVGVDI 610
Query: 842 SKEE 845
S+EE
Sbjct: 611 SREE 614
Score = 132 (51.5 bits), Expect = 7.5e-99, Sum P(4) = 7.5e-99
Identities = 29/89 (32%), Positives = 52/89 (58%)
Query: 413 IVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAVLRNRQRSLGL 472
I+P + PIGL FLP + + Q ++ + + + MS I GHD M VL +R ++L
Sbjct: 457 IIPATRNEPIGLKASDFLP-AVKVPQ-QAELVDEDAMSQIRKGHDTMFVVLTSRHKNLDT 514
Query: 473 VYMAVNNKNMEAGIDTALSMNDGTVMIDL 501
V +++ +D+A+++ND +V++DL
Sbjct: 515 VRAVWTTGDIKTSVDSAVAINDLSVVVDL 543
Score = 62 (26.9 bits), Expect = 7.0e-19, Sum P(3) = 7.0e-19
Identities = 18/71 (25%), Positives = 28/71 (39%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVYGWEPARQ 355
S S D + WD+ + V +S +R L FS G+ L D +K++ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 356 YDAQPMGWGKV 366
P G V
Sbjct: 182 MSEFPGHTGPV 192
Score = 60 (26.2 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 27/114 (23%), Positives = 50/114 (43%)
Query: 245 LFATIANPCDYS--AIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR 302
L AT + C + +I +P+ ++ +G PV R + P+ L + S
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNT---PEE------LIVAGSQSG 85
Query: 303 TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-GLKVYGWEPARQ 355
++ WDLE ++ T + + I L F GE + G + +K+ W+ R+
Sbjct: 86 SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL--WDIRRK 137
Score = 50 (22.7 bits), Expect = 8.5e-82, Sum P(4) = 8.5e-82
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S++ D TV WDL ++S ++ + + F E LL + + W+
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWD 217
Score = 47 (21.6 bits), Expect = 5.9e-90, Sum P(4) = 5.9e-90
Identities = 23/87 (26%), Positives = 35/87 (40%)
Query: 660 PSYSTGSVDMATTSPHPLPRKPLERDVDELVYISPFGQ----EKPSVDFEVPTKESEIYP 715
P S + P P P + V E+ SP + P + EVP + S +
Sbjct: 388 PKNSISRTPPRRSEPFPAPPEDDAATVKEVSKPSPAMDVQLPQLPVPNLEVPARPSVMTS 447
Query: 716 TYVRKG-PDMYGPQSQYAPT--KENDY 739
T KG PD+ P ++ P K +D+
Sbjct: 448 TPAPKGEPDII-PATRNEPIGLKASDF 473
Score = 47 (21.6 bits), Expect = 1.7e-86, Sum P(4) = 1.7e-86
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 512 KCVKVYNALMPVKSVLLKKQTVQGKLGQTFRDL 544
KC + L + ++ K + G+ G FR+L
Sbjct: 618 KCRLCFKQLKSISGLVKSKSGLSGRHGSAFREL 650
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 533 (192.7 bits), Expect = 9.6e-99, Sum P(4) = 9.6e-99
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG+++ SGS D+ IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ YRGHS+++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
Score = 226 (84.6 bits), Expect = 3.4e-36, Sum P(3) = 3.4e-36
Identities = 83/273 (30%), Positives = 118/273 (43%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
+ H +V CL G+ LA+ DD V LW L + GH+ PV V+F E
Sbjct: 143 YRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF-IKLWDL 129
L++G +I+ W+L V + G + SV F+P G L SG DS + W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189
R C + + + D IG +F +N S +VVDL+ V
Sbjct: 262 ER--CFDVVLVNWGKVADLAICNDQL------------IGVAFSQSNVSSYVVDLTRVTR 307
Query: 190 LGT---PPPQ----YTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE----- 237
GT P Q T P + SLR+ + RP T +K R++ N+ESE
Sbjct: 308 TGTVTQDPVQASQPQTQQTP-NPGVSLRRIYE--RPSTTCSKPQ--RVKHNSESERRSPS 362
Query: 238 --DQAGEEELFATIANPCDYSAIFQPHRSLNRS 268
D E E A I N DY+ IFQP S++R+
Sbjct: 363 SEDDKDERESRAEIQNAEDYNEIFQPKNSISRT 395
Score = 222 (83.2 bits), Expect = 9.5e-36, Sum P(3) = 9.5e-36
Identities = 44/154 (28%), Positives = 74/154 (48%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
M H A++ C G+ +A+G D + LW + + C+ GHS V ++F +
Sbjct: 102 MGHKANI-CSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
L++ ++K+W+L + GH + V+FHP L SGS D I+ WDL +
Sbjct: 161 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
+ G + S+ F+PDG + SG +D +
Sbjct: 221 FQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 254
Score = 213 (80.0 bits), Expect = 9.6e-99, Sum P(4) = 9.6e-99
Identities = 40/83 (48%), Positives = 51/83 (61%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S+DRT+ FWDLEKF +VS E +R + F+ G CL G + L+VYGWEP
Sbjct: 203 LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPE 262
Query: 354 RQYDAQPMGWGKVQDLAVTGTQL 376
R +D + WGKV DLA+ QL
Sbjct: 263 RCFDVVLVNWGKVADLAICNDQL 285
Score = 190 (71.9 bits), Expect = 4.7e-50, Sum P(4) = 4.7e-50
Identities = 40/154 (25%), Positives = 73/154 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + V + L +++ G + +W L + + +L GH + S+ F E +
Sbjct: 62 HTSPVESVRLNTPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G Q +IK+W++ GH ++ + F P G +L S + D +KLWDL
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
+ + GH+ +N + F P+ +ASG D +R
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Score = 165 (63.1 bits), Expect = 9.6e-99, Sum P(4) = 9.6e-99
Identities = 32/64 (50%), Positives = 47/64 (73%)
Query: 782 NVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVDI 841
++W L+LC+ +LP I+ LLQSKYE Y+ T C +L LIL+ F P+I + + + S+GVDI
Sbjct: 549 SLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILA-APPSVGVDI 607
Query: 842 SKEE 845
S+EE
Sbjct: 608 SREE 611
Score = 131 (51.2 bits), Expect = 9.6e-99, Sum P(4) = 9.6e-99
Identities = 29/89 (32%), Positives = 52/89 (58%)
Query: 413 IVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAVLRNRQRSLGL 472
I+P + PIGL FLP + + Q ++ + + + MS I GHD M VL +R ++L
Sbjct: 454 IIPATRNEPIGLKASDFLP-AVKVPQ-QAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDT 511
Query: 473 VYMAVNNKNMEAGIDTALSMNDGTVMIDL 501
V +++ +D+A+++ND +V++DL
Sbjct: 512 VRAVWTTGDIKTSVDSAVAINDLSVVVDL 540
Score = 62 (26.9 bits), Expect = 8.7e-19, Sum P(3) = 8.7e-19
Identities = 18/71 (25%), Positives = 28/71 (39%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVYGWEPARQ 355
S S D + WD+ + V +S +R L FS G+ L D +K++ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 356 YDAQPMGWGKV 366
P G V
Sbjct: 182 MSEFPGHTGPV 192
Score = 60 (26.2 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 27/114 (23%), Positives = 50/114 (43%)
Query: 245 LFATIANPCDYS--AIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR 302
L AT + C + +I +P+ ++ +G PV R + P+ L + S
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNT---PEE------LIVAGSQSG 85
Query: 303 TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-GLKVYGWEPARQ 355
++ WDLE ++ T + + I L F GE + G + +K+ W+ R+
Sbjct: 86 SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL--WDIRRK 137
Score = 50 (22.7 bits), Expect = 1.1e-81, Sum P(4) = 1.1e-81
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S++ D TV WDL ++S ++ + + F E LL + + W+
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWD 217
Score = 44 (20.5 bits), Expect = 4.4e-86, Sum P(4) = 4.4e-86
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 512 KCVKVYNALMPVKSVLLKKQTVQGKLGQTFRDL 544
KC + L + ++ + + G+ G FR+L
Sbjct: 615 KCRLCFKQLKSISGLVKSRSGLSGRHGSAFREL 647
Score = 43 (20.2 bits), Expect = 1.6e-89, Sum P(4) = 1.6e-89
Identities = 14/72 (19%), Positives = 27/72 (37%)
Query: 676 PLPRKPLERDVDELVYISPFGQEKPSVDFEVPTKESEI--YPTYVRKGPDMYGPQSQYAP 733
P P P D++ + P++D ++P E+ P+ + P G
Sbjct: 402 PFPAPP----EDDIATAKEASKPSPAMDVQLPVPSQEVPARPSVMTSTPAPKGEPVIIPA 457
Query: 734 TKENDYGSQSGD 745
T+ G ++ D
Sbjct: 458 TRNEPIGLKASD 469
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 533 (192.7 bits), Expect = 9.6e-99, Sum P(4) = 9.6e-99
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG+++ SGS D+ IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ YRGHS+++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
Score = 222 (83.2 bits), Expect = 9.5e-36, Sum P(3) = 9.5e-36
Identities = 44/154 (28%), Positives = 74/154 (48%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
M H A++ C G+ +A+G D + LW + + C+ GHS V ++F +
Sbjct: 102 MGHKANI-CSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
L++ ++K+W+L + GH + V+FHP L SGS D I+ WDL +
Sbjct: 161 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
+ G + S+ F+PDG + SG +D +
Sbjct: 221 FQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 254
Score = 219 (82.2 bits), Expect = 2.1e-35, Sum P(3) = 2.1e-35
Identities = 81/272 (29%), Positives = 120/272 (44%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
+ H +V CL G+ LA+ DD V LW L + GH+ PV V+F E
Sbjct: 143 YRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF-IKLWDL 129
L++G +I+ W+L V + G + SV F+P G L SG DS + W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189
R C + + + D IG +F +N S +VVDL+ V
Sbjct: 262 ER--CFDVVLVNWGKVADLAICNDQL------------IGVAFSQSNVSSYVVDLTRVTR 307
Query: 190 LGT---PPPQYTSSV--PFSHNTS-LRKSFTKGRPGGTKAKIDVTRIEENAESE------ 237
GT P Q + P + ++ LR+ + RP T +K R+++N+ESE
Sbjct: 308 TGTVARDPVQDHRPLAQPLPNPSAPLRRIYE--RPSTTCSKPQ--RVKQNSESERRSPSS 363
Query: 238 -DQAGEEELFATIANPCDYSAIFQPHRSLNRS 268
D E E A I N DY+ IFQP S++R+
Sbjct: 364 EDDRDERESRAEIQNAEDYNEIFQPKNSISRT 395
Score = 213 (80.0 bits), Expect = 9.6e-99, Sum P(4) = 9.6e-99
Identities = 40/83 (48%), Positives = 51/83 (61%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S+DRT+ FWDLEKF +VS E +R + F+ G CL G + L+VYGWEP
Sbjct: 203 LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPE 262
Query: 354 RQYDAQPMGWGKVQDLAVTGTQL 376
R +D + WGKV DLA+ QL
Sbjct: 263 RCFDVVLVNWGKVADLAICNDQL 285
Score = 190 (71.9 bits), Expect = 4.7e-50, Sum P(4) = 4.7e-50
Identities = 40/154 (25%), Positives = 73/154 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + V + L +++ G + +W L + + +L GH + S+ F E +
Sbjct: 62 HTSPVESVRLNTPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G Q +IK+W++ GH ++ + F P G +L S + D +KLWDL
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
+ + GH+ +N + F P+ +ASG D +R
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Score = 168 (64.2 bits), Expect = 9.6e-99, Sum P(4) = 9.6e-99
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 782 NVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVDI 841
++W L+LC+ +LP I+ LLQSKYE Y+ T C +L LIL+ F P+I +M + S+GVDI
Sbjct: 549 SLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLI-TDMLAAPPSVGVDI 607
Query: 842 SKEE 845
S+EE
Sbjct: 608 SREE 611
Score = 128 (50.1 bits), Expect = 9.6e-99, Sum P(4) = 9.6e-99
Identities = 29/89 (32%), Positives = 52/89 (58%)
Query: 413 IVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAVLRNRQRSLGL 472
I+P + PIGL FLP + + Q ++ + + + MS I GHD M VL +R ++L
Sbjct: 454 IIPATRNEPIGLKASDFLP-AVKIPQ-QAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDT 511
Query: 473 VYMAVNNKNMEAGIDTALSMNDGTVMIDL 501
V +++ +D+A+++ND +V++DL
Sbjct: 512 VRAVWTMGDIKTSVDSAVAINDLSVVVDL 540
Score = 62 (26.9 bits), Expect = 8.3e-19, Sum P(3) = 8.3e-19
Identities = 18/71 (25%), Positives = 28/71 (39%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVYGWEPARQ 355
S S D + WD+ + V +S +R L FS G+ L D +K++ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 356 YDAQPMGWGKV 366
P G V
Sbjct: 182 MSEFPGHTGPV 192
Score = 60 (26.2 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 27/114 (23%), Positives = 50/114 (43%)
Query: 245 LFATIANPCDYS--AIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR 302
L AT + C + +I +P+ ++ +G PV R + P+ L + S
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNT---PEE------LIVAGSQSG 85
Query: 303 TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-GLKVYGWEPARQ 355
++ WDLE ++ T + + I L F GE + G + +K+ W+ R+
Sbjct: 86 SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL--WDIRRK 137
Score = 56 (24.8 bits), Expect = 5.0e-87, Sum P(4) = 5.0e-87
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 512 KCVKVYNALMPVKSVLLKKQTVQGKLGQTFRDL 544
KC Y L + ++ K + G+ G TFR+L
Sbjct: 615 KCRLCYKQLKSISGLVKSKSGLSGRHGSTFREL 647
Score = 50 (22.7 bits), Expect = 1.1e-81, Sum P(4) = 1.1e-81
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S++ D TV WDL ++S ++ + + F E LL + + W+
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWD 217
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 533 (192.7 bits), Expect = 2.0e-98, Sum P(4) = 2.0e-98
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG+++ SGS D+ IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ YRGHS+++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
Score = 222 (83.2 bits), Expect = 2.5e-35, Sum P(3) = 2.5e-35
Identities = 44/154 (28%), Positives = 74/154 (48%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
M H A++ C G+ +A+G D + LW + + C+ GHS V ++F +
Sbjct: 102 MGHKANI-CSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
L++ ++K+W+L + GH + V+FHP L SGS D I+ WDL +
Sbjct: 161 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
+ G + S+ F+PDG + SG +D +
Sbjct: 221 FQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 254
Score = 214 (80.4 bits), Expect = 2.0e-98, Sum P(4) = 2.0e-98
Identities = 41/83 (49%), Positives = 51/83 (61%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S+DRT+ FWDLEKF +VS E +R + F+ G CL G + L+VYGWEP
Sbjct: 203 LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPE 262
Query: 354 RQYDAQPMGWGKVQDLAVTGTQL 376
R +D + WGKV DLAV QL
Sbjct: 263 RCFDVVLVSWGKVADLAVCNDQL 285
Score = 209 (78.6 bits), Expect = 7.0e-34, Sum P(3) = 7.0e-34
Identities = 77/272 (28%), Positives = 116/272 (42%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
+ H +V CL G+ LA+ DD V LW L + GH+ PV V+F E
Sbjct: 143 YRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF-IKLWDL 129
L++G +I+ W+L V + G + SV F+P G L SG DS + W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189
R C + + D IG +F +N S +VVDL+ V
Sbjct: 262 ER--CFDVVLVSWGKVADLAVCNDQL------------IGVAFSQSNVSSYVVDLTRVTR 307
Query: 190 LGT---PPPQYTSSV---PFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE------ 237
GT P Q + + P + LR+ + + K + R+++N+ESE
Sbjct: 308 TGTVAQDPVQDSRPLAQQPAHPSAPLRRIYERPSTACNKPQ----RVKQNSESERRSPSS 363
Query: 238 -DQAGEEELFATIANPCDYSAIFQPHRSLNRS 268
D E E A I N +Y+ IFQP S++R+
Sbjct: 364 EDDRDERESRAEIQNTEEYNEIFQPKNSISRT 395
Score = 190 (71.9 bits), Expect = 9.3e-50, Sum P(4) = 9.3e-50
Identities = 40/154 (25%), Positives = 73/154 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + V + L +++ G + +W L + + +L GH + S+ F E +
Sbjct: 62 HTSPVESVRLNTPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G Q +IK+W++ GH ++ + F P G +L S + D +KLWDL
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
+ + GH+ +N + F P+ +ASG D +R
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Score = 165 (63.1 bits), Expect = 2.0e-98, Sum P(4) = 2.0e-98
Identities = 32/64 (50%), Positives = 47/64 (73%)
Query: 782 NVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVDI 841
++W L+LC+ +LP I+ LLQSKYE Y+ T C +L LIL+ F P+I + + + S+GVDI
Sbjct: 549 SLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILA-APPSVGVDI 607
Query: 842 SKEE 845
S+EE
Sbjct: 608 SREE 611
Score = 127 (49.8 bits), Expect = 2.0e-98, Sum P(4) = 2.0e-98
Identities = 29/89 (32%), Positives = 51/89 (57%)
Query: 413 IVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAVLRNRQRSLGL 472
I+P + PIGL FLP + + Q + + + + MS I GHD M VL +R ++L
Sbjct: 454 IIPATRNEPIGLKASDFLP-AVKIPQ-QVELVDEDAMSQIRKGHDTMCVVLTSRHKNLDT 511
Query: 473 VYMAVNNKNMEAGIDTALSMNDGTVMIDL 501
V +++ +D+A+++ND +V++DL
Sbjct: 512 VRAVWTTGDIKTSVDSAVAINDLSVVVDL 540
Score = 62 (26.9 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 18/71 (25%), Positives = 28/71 (39%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVYGWEPARQ 355
S S D + WD+ + V +S +R L FS G+ L D +K++ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 356 YDAQPMGWGKV 366
P G V
Sbjct: 182 MSEFPGHTGPV 192
Score = 60 (26.2 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 27/114 (23%), Positives = 50/114 (43%)
Query: 245 LFATIANPCDYS--AIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR 302
L AT + C + +I +P+ ++ +G PV R + P+ L + S
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNT---PEE------LIVAGSQSG 85
Query: 303 TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-GLKVYGWEPARQ 355
++ WDLE ++ T + + I L F GE + G + +K+ W+ R+
Sbjct: 86 SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL--WDIRRK 137
Score = 54 (24.1 bits), Expect = 8.1e-87, Sum P(4) = 8.1e-87
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 512 KCVKVYNALMPVKSVLLKKQTVQGKLGQTFRDL 544
KC Y L + ++ K ++ G+ G FR+L
Sbjct: 615 KCRLCYKQLKSISGLVKSKSSLSGRHGSAFREL 647
Score = 50 (22.7 bits), Expect = 2.8e-81, Sum P(4) = 2.8e-81
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S++ D TV WDL ++S ++ + + F E LL + + W+
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWD 217
Score = 38 (18.4 bits), Expect = 4.1e-89, Sum P(4) = 4.1e-89
Identities = 14/74 (18%), Positives = 29/74 (39%)
Query: 697 QEKPSVDFEVPTKESEIYPTYVRKGPDMYGPQ---SQYAPTKENDYGSQSGDSMLGDHEA 753
+ PS + + +ES + +++ P+ S+ P + + + D M E
Sbjct: 358 RRSPSSEDDRDERESRAEIQNTEEYNEIFQPKNSISRTPPRRSEPFPAPPEDDMATAKEV 417
Query: 754 ETHEPSRYSMKPIP 767
P+ S P+P
Sbjct: 418 AKPSPATDSQFPVP 431
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 519 (187.8 bits), Expect = 3.0e-98, Sum P(4) = 3.0e-98
Identities = 86/162 (53%), Positives = 128/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK +G++LATGGDD +VN+W++ K NC+MSL+GH+TP+ES+Q
Sbjct: 12 KLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQI 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG ++ SGSLD+ IKL
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+ Y+ H++++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKL 173
Score = 221 (82.9 bits), Expect = 3.0e-98, Sum P(4) = 3.0e-98
Identities = 41/83 (49%), Positives = 55/83 (66%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S+DRT+ FWDLEKF +VS E+ ++ +R + F+ G CL GG + L+VYGWEP
Sbjct: 203 LLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPE 262
Query: 354 RQYDAQPMGWGKVQDLAVTGTQL 376
R +D + WGKV DL+V QL
Sbjct: 263 RCFDVVVVNWGKVADLSVCHNQL 285
Score = 196 (74.1 bits), Expect = 6.1e-40, Sum P(4) = 6.1e-40
Identities = 41/154 (26%), Positives = 70/154 (45%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H A++ C G +A+G D + LW + + CI H+ V ++F +
Sbjct: 102 LGHKANI-CSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGK 160
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
L++ ++K+W+L V GH + V+FHP L SGS D I+ WDL +
Sbjct: 161 WLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEK 220
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
+ + + I F+PDG + G +D +
Sbjct: 221 FHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSL 254
Score = 182 (69.1 bits), Expect = 1.5e-50, Sum P(4) = 1.5e-50
Identities = 40/165 (24%), Positives = 73/165 (44%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + L + K +++ G + +W L + + +L GH + S+ F +
Sbjct: 62 HTTPIESLQISAKE-ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFV 120
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G IK+W++ H ++ + F P G +L S + D +KLWDL
Sbjct: 121 ASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG--ASFHLTN 176
++ + GHS +N + F P +ASG D +R FH+ +
Sbjct: 181 VMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVS 225
Score = 162 (62.1 bits), Expect = 3.0e-98, Sum P(4) = 3.0e-98
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 782 NVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVDI 841
++W L+LC+ +LP I+ LLQSKYE Y+ T C +L LIL+ F P+I + + + S+GVDI
Sbjct: 551 SLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILA-APPSVGVDI 609
Query: 842 SKEE 845
++EE
Sbjct: 610 TREE 613
Score = 138 (53.6 bits), Expect = 3.0e-98, Sum P(4) = 3.0e-98
Identities = 30/96 (31%), Positives = 53/96 (55%)
Query: 406 MGRERDQIVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAVLRN 465
M R ++P + PIGL FLP +Q ++ +++ E+MS I GH + VL +
Sbjct: 449 MPRAEPSVIPAARNEPIGLKASDFLPAL--KNQSQAELTDEEIMSQIRKGHKTVCMVLTS 506
Query: 466 RQRSLGLVYMAVNNKNMEAGIDTALSMNDGTVMIDL 501
R ++L V + +M+ +D A++ ND +V++DL
Sbjct: 507 RHKNLDTVRAVWSTSDMKNSVDAAVATNDLSVVVDL 542
Score = 107 (42.7 bits), Expect = 2.6e-86, Sum P(4) = 2.6e-86
Identities = 37/111 (33%), Positives = 53/111 (47%)
Query: 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSS-----VPFSHNTSLRKSFTKGRPGGTK 222
IG SF + S VVDLS V G+ P + P +SLR+S+ RP +
Sbjct: 286 IGVSFAQSTVSSFVVDLSRVTKSGSVPHGLLRNNELLAQPTPTGSSLRRSYD--RPSTSC 343
Query: 223 AKIDVTRIEENAE-----SEDQAGEEELFATIANPCDYSAIFQPHRSLNRS 268
+K + +E SE+ E+E A I NP DY IFQP +++R+
Sbjct: 344 SKPQRVKHSSESERRSPSSEEDRDEKESKAEIQNPEDYKEIFQPRNAISRT 394
Score = 59 (25.8 bits), Expect = 7.3e-19, Sum P(3) = 7.3e-19
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
L + D VN W + K + V + +++ I L S E ++ G G ++V+ E
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEA 94
Query: 353 AR 354
A+
Sbjct: 95 AK 96
Score = 58 (25.5 bits), Expect = 9.2e-19, Sum P(3) = 9.2e-19
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVY 348
S S D + WD+ + + + ++ +R L FS G+ L D +K++
Sbjct: 122 SGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLW 174
Score = 53 (23.7 bits), Expect = 7.7e-87, Sum P(4) = 7.7e-87
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 512 KCVKVYNALMPVKSVLLKKQTVQGKLGQTFRDL 544
KC Y L + +++ K + G+ G FR+L
Sbjct: 617 KCRLCYKQLKNISNIVKNKSGLSGRHGSAFREL 649
Score = 46 (21.3 bits), Expect = 6.1e-80, Sum P(4) = 6.1e-80
Identities = 13/55 (23%), Positives = 23/55 (41%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S++ D TV WDL ++ +S + + F E LL + + W+
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPS-EYLLASGSSDRTIRFWD 217
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 533 (192.7 bits), Expect = 3.2e-98, Sum P(4) = 3.2e-98
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG+++ SGS D+ IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ YRGHS+++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
Score = 223 (83.6 bits), Expect = 2.6e-35, Sum P(3) = 2.6e-35
Identities = 45/154 (29%), Positives = 74/154 (48%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
M H A++ C G+ +A+G D + LW + + C+ GHS V ++F +
Sbjct: 102 MGHKANI-CSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
L++ ++K+W+L + GH + V+FHP L SGS D I+ WDL +
Sbjct: 161 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
+ G + SI F+PDG + SG +D +
Sbjct: 221 FQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSL 254
Score = 221 (82.9 bits), Expect = 4.3e-35, Sum P(3) = 4.3e-35
Identities = 81/272 (29%), Positives = 119/272 (43%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
+ H +V CL G+ LA+ DD V LW L + GH+ PV V+F E
Sbjct: 143 YRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF-IKLWDL 129
L++G +I+ W+L V + G + S+ F+P G L SG DS + W+
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189
R C H + + + Q I G +F +N S +VVDL+ V
Sbjct: 262 ER--CFDVVLVHWGKVADLAIC-NNQLI-----------GVAFSQSNVSSYVVDLTRVTR 307
Query: 190 LGTPP--PQYTSSVPFS---HNTS-LRKSFTKGRPGGTKAKIDVTRIEENAESE------ 237
GT P S P H ++ LR+ + RP +K R+++N+ESE
Sbjct: 308 TGTVARDPVQDSRPPTQQPPHPSAPLRRIYE--RPSTACSKPQ--RVKQNSESERRSPSS 363
Query: 238 -DQAGEEELFATIANPCDYSAIFQPHRSLNRS 268
D E E A I N DY+ IFQP S++R+
Sbjct: 364 EDDRDERESRAEIQNAEDYNEIFQPKNSISRT 395
Score = 213 (80.0 bits), Expect = 3.2e-98, Sum P(4) = 3.2e-98
Identities = 40/83 (48%), Positives = 51/83 (61%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S+DRT+ FWDLEKF +VS E +R + F+ G CL G + L+VYGWEP
Sbjct: 203 LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGWEPE 262
Query: 354 RQYDAQPMGWGKVQDLAVTGTQL 376
R +D + WGKV DLA+ QL
Sbjct: 263 RCFDVVLVHWGKVADLAICNNQL 285
Score = 190 (71.9 bits), Expect = 1.7e-49, Sum P(4) = 1.7e-49
Identities = 40/154 (25%), Positives = 73/154 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + V + L +++ G + +W L + + +L GH + S+ F E +
Sbjct: 62 HTSPVESVRLNTPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G Q +IK+W++ GH ++ + F P G +L S + D +KLWDL
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
+ + GH+ +N + F P+ +ASG D +R
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Score = 165 (63.1 bits), Expect = 3.2e-98, Sum P(4) = 3.2e-98
Identities = 32/64 (50%), Positives = 47/64 (73%)
Query: 782 NVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVDI 841
++W L+LC+ +LP I+ LLQSKYE Y+ T C +L LIL+ F P+I + + + S+GVDI
Sbjct: 557 SLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILA-APPSVGVDI 615
Query: 842 SKEE 845
S+EE
Sbjct: 616 SREE 619
Score = 126 (49.4 bits), Expect = 3.2e-98, Sum P(4) = 3.2e-98
Identities = 34/114 (29%), Positives = 61/114 (53%)
Query: 390 GFSTLDSYSAGSPVSTMGRERDQ--IVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESE 447
G TL+ S V++ + + I P + PIGL FLP + + Q ++ + + +
Sbjct: 437 GAGTLEVLSRPPVVTSTPAPKAEPAIFPATRNEPIGLKASDFLP-AVKIPQ-QAELVDED 494
Query: 448 LMSTIFNGHDKMMAVLRNRQRSLGLVYMAVNNKNMEAGIDTALSMNDGTVMIDL 501
MS I GHD M VL +R ++L V +++ +D+A+++ND +V++DL
Sbjct: 495 AMSQIRKGHDTMCVVLTSRHKNLDTVRGVWTTGDIKTSVDSAVAINDLSVVVDL 548
Score = 62 (26.9 bits), Expect = 3.0e-18, Sum P(3) = 3.0e-18
Identities = 18/71 (25%), Positives = 28/71 (39%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVYGWEPARQ 355
S S D + WD+ + V +S +R L FS G+ L D +K++ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 356 YDAQPMGWGKV 366
P G V
Sbjct: 182 MSEFPGHTGPV 192
Score = 60 (26.2 bits), Expect = 4.8e-18, Sum P(3) = 4.8e-18
Identities = 27/114 (23%), Positives = 50/114 (43%)
Query: 245 LFATIANPCDYS--AIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADR 302
L AT + C + +I +P+ ++ +G PV R + P+ L + S
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNT---PEE------LIVAGSQSG 85
Query: 303 TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-GLKVYGWEPARQ 355
++ WDLE ++ T + + I L F GE + G + +K+ W+ R+
Sbjct: 86 SIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL--WDIRRK 137
Score = 52 (23.4 bits), Expect = 2.1e-86, Sum P(4) = 2.1e-86
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 512 KCVKVYNALMPVKSVLLKKQTVQGKLGQTFRDL 544
KC Y L + +++ K + G+ G FR+L
Sbjct: 623 KCRLCYKQLKSISNLVKSKSGLSGRHGSAFREL 655
Score = 50 (22.7 bits), Expect = 3.6e-81, Sum P(4) = 3.6e-81
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S++ D TV WDL ++S ++ + + F E LL + + W+
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWD 217
Score = 37 (18.1 bits), Expect = 6.6e-89, Sum P(4) = 6.6e-89
Identities = 14/74 (18%), Positives = 29/74 (39%)
Query: 697 QEKPSVDFEVPTKESEIYPTYVRKGPDMYGPQ---SQYAPTKENDYGSQSGDSMLGDHEA 753
+ PS + + +ES +++ P+ S+ P + + + D M EA
Sbjct: 358 RRSPSSEDDRDERESRAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPEDDMATAKEA 417
Query: 754 ETHEPSRYSMKPIP 767
P+ + P+P
Sbjct: 418 AKPSPATDAQFPVP 431
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 519 (187.8 bits), Expect = 1.4e-96, Sum P(4) = 1.4e-96
Identities = 86/162 (53%), Positives = 128/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK +G++LATGGDD +VN+W++ K NC+MSL+GH+TP+ES+Q
Sbjct: 12 KLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQI 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG ++ SGSLD+ IKL
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+ Y+ H++++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKL 173
Score = 212 (79.7 bits), Expect = 1.4e-96, Sum P(4) = 1.4e-96
Identities = 40/96 (41%), Positives = 62/96 (64%)
Query: 281 LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG 340
++++ P + ++L + SS+ T+ FWDLEKF +VS E+ ++ +R + F+ G CL GG
Sbjct: 192 VNVVEFHPSIEYLLASGSSS-MTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGG 250
Query: 341 DTEGLKVYGWEPARQYDAQPMGWGKVQDLAVTGTQL 376
+ L+VYGWEP R +D + WGKV DL+V QL
Sbjct: 251 FQDSLRVYGWEPERCFDVVVVNWGKVADLSVCHNQL 286
Score = 190 (71.9 bits), Expect = 1.6e-38, Sum P(4) = 1.6e-38
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H A++ C G +A+G D + LW + + CI H+ V ++F +
Sbjct: 102 LGHKANI-CSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGK 160
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSLDSFIKLWDLR 130
L++ ++K+W+L V GH + V+FHP +YL SGS I+ WDL
Sbjct: 161 WLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLE 220
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
+ + + + I F+PDG + G +D +
Sbjct: 221 KFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSL 255
Score = 165 (63.1 bits), Expect = 1.0e-35, Sum P(4) = 1.0e-35
Identities = 38/166 (22%), Positives = 73/166 (43%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + L + K +++ G + +W L + + +L GH + S+ F +
Sbjct: 62 HTTPIESLQISAKE-ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFV 120
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G IK+W++ H ++ + F P G +L S + D +KLWDL
Sbjct: 121 ASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 134 CIYTYRGHSKSINSIRFSPDGQWI-ASGGEDGVVRIG--ASFHLTN 176
++ + GH +N + F P +++ ASG +R FH+ +
Sbjct: 181 VMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVS 226
Score = 162 (62.1 bits), Expect = 1.4e-96, Sum P(4) = 1.4e-96
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 782 NVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVDI 841
++W L+LC+ +LP I+ LLQSKYE Y+ T C +L LIL+ F P+I + + + S+GVDI
Sbjct: 555 SLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILA-APPSVGVDI 613
Query: 842 SKEE 845
++EE
Sbjct: 614 TREE 617
Score = 131 (51.2 bits), Expect = 1.4e-96, Sum P(4) = 1.4e-96
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 406 MGRERDQIVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAVLRN 465
M R ++P + PIGL FLP +Q ++ +++ E+MS I GH + VL +
Sbjct: 450 MPRAEPSVIPAARNEPIGLKASDFLPAL--KNQSQAELTDEEIMSQIRKGHKTVCMVLTS 507
Query: 466 RQRSLGLVYMAVNNKNMEA---GIDTALSMNDGTVMIDL 501
R ++L V + +M+A +D A++ ND +V++DL
Sbjct: 508 RHKNLDTVRAVWSTSDMKARMNSVDAAVATNDLSVVVDL 546
Score = 107 (42.7 bits), Expect = 1.4e-85, Sum P(4) = 1.4e-85
Identities = 37/111 (33%), Positives = 53/111 (47%)
Query: 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSS-----VPFSHNTSLRKSFTKGRPGGTK 222
IG SF + S VVDLS V G+ P + P +SLR+S+ RP +
Sbjct: 287 IGVSFAQSTVSSFVVDLSRVTKSGSVPHGLLRNNELLAQPTPTGSSLRRSYD--RPSTSC 344
Query: 223 AKIDVTRIEENAE-----SEDQAGEEELFATIANPCDYSAIFQPHRSLNRS 268
+K + +E SE+ E+E A I NP DY IFQP +++R+
Sbjct: 345 SKPQRVKHSSESERRSPSSEEDRDEKESKAEIQNPEDYKEIFQPRNAISRT 395
Score = 72 (30.4 bits), Expect = 3.8e-26, Sum P(4) = 3.8e-26
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG 69
+F H VN + +LA+G + W L K + + + +TPV + F
Sbjct: 184 EFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPD 243
Query: 70 EETLSAGCQSGSIKIW 85
L G Q S++++
Sbjct: 244 GCCLYGGFQD-SLRVY 258
Score = 59 (25.8 bits), Expect = 3.9e-18, Sum P(3) = 3.9e-18
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
L + D VN W + K + V + +++ I L S E ++ G G ++V+ E
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEA 94
Query: 353 AR 354
A+
Sbjct: 95 AK 96
Score = 58 (25.5 bits), Expect = 4.9e-18, Sum P(3) = 4.9e-18
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVY 348
S S D + WD+ + + + ++ +R L FS G+ L D +K++
Sbjct: 122 SGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLW 174
Score = 53 (23.7 bits), Expect = 3.6e-85, Sum P(4) = 3.6e-85
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 512 KCVKVYNALMPVKSVLLKKQTVQGKLGQTFRDL 544
KC Y L + +++ K + G+ G FR+L
Sbjct: 621 KCRLCYKQLKNISNIVKNKSGLSGRHGSAFREL 653
Score = 50 (22.7 bits), Expect = 1.3e-79, Sum P(4) = 1.3e-79
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S++ D TV WDL ++ + + + F E LL + + + W+
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWD 218
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 519 (187.8 bits), Expect = 1.4e-96, Sum P(4) = 1.4e-96
Identities = 86/162 (53%), Positives = 128/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK +G++LATGGDD +VN+W++ K NC+MSL+GH+TP+ES+Q
Sbjct: 12 KLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQI 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG ++ SGSLD+ IKL
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+ Y+ H++++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKL 173
Score = 205 (77.2 bits), Expect = 1.4e-96, Sum P(4) = 1.4e-96
Identities = 38/79 (48%), Positives = 51/79 (64%)
Query: 298 SSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQYD 357
S RT+ FWDLEKF +VS E+ ++ +R + F+ G CL GG + L+VYGWEP R +D
Sbjct: 207 SPVHRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFD 266
Query: 358 AQPMGWGKVQDLAVTGTQL 376
+ WGKV DL+V QL
Sbjct: 267 VVVVNWGKVADLSVCHNQL 285
Score = 178 (67.7 bits), Expect = 3.3e-38, Sum P(4) = 3.3e-38
Identities = 39/155 (25%), Positives = 71/155 (45%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H A++ C G +A+G D + LW + + CI H+ V ++F +
Sbjct: 102 LGHKANI-CSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGK 160
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGS-LDSFIKLWDLR 130
L++ ++K+W+L V GH + V+FHP +Y +GS + I+ WDL
Sbjct: 161 WLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHP-SEYPLAGSPVHRTIRFWDLE 219
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
+ + + + I F+PDG + G +D +
Sbjct: 220 KFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSL 254
Score = 162 (62.1 bits), Expect = 1.4e-96, Sum P(4) = 1.4e-96
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 782 NVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVDI 841
++W L+LC+ +LP I+ LLQSKYE Y+ T C +L LIL+ F P+I + + + S+GVDI
Sbjct: 555 SLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILA-APPSVGVDI 613
Query: 842 SKEE 845
++EE
Sbjct: 614 TREE 617
Score = 153 (58.9 bits), Expect = 1.1e-45, Sum P(4) = 1.1e-45
Identities = 36/165 (21%), Positives = 69/165 (41%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + L + K +++ G + +W L + + +L GH + S+ F +
Sbjct: 62 HTTPIESLQISAKE-ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFV 120
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G IK+W++ H ++ + F P G +L S + D +KLWDL
Sbjct: 121 ASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG--ASFHLTN 176
++ + GH +N + F P +A +R FH+ +
Sbjct: 181 VMFEFTGHYGPVNVVEFHPSEYPLAGSPVHRTIRFWDLEKFHVVS 225
Score = 138 (53.6 bits), Expect = 1.4e-96, Sum P(4) = 1.4e-96
Identities = 30/96 (31%), Positives = 53/96 (55%)
Query: 406 MGRERDQIVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAVLRN 465
M R ++P + PIGL FLP +Q ++ +++ E+MS I GH + VL +
Sbjct: 453 MPRAEPSVIPAARNEPIGLKASDFLPAL--KNQSQAELTDEEIMSQIRKGHKTVCMVLTS 510
Query: 466 RQRSLGLVYMAVNNKNMEAGIDTALSMNDGTVMIDL 501
R ++L V + +M+ +D A++ ND +V++DL
Sbjct: 511 RHKNLDTVRAVWSTSDMKNSVDAAVATNDLSVVVDL 546
Score = 110 (43.8 bits), Expect = 1.2e-86, Sum P(4) = 1.2e-86
Identities = 36/110 (32%), Positives = 52/110 (47%)
Query: 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSS-----VPFSHNTSLRKSFTKGRPGGTK 222
IG SF + S VVDLS V G+ P + P +SLR+S+ + +K
Sbjct: 286 IGVSFAQSTVSSFVVDLSRVTKSGSVPHGLLRNNELLAQPTPTGSSLRRSYDRPSTSCSK 345
Query: 223 AKIDVTRIEENAE----SEDQAGEEELFATIANPCDYSAIFQPHRSLNRS 268
+ V E+ SE+ E+E A I NP DY IFQP +++R+
Sbjct: 346 PQSRVKHSSESERRSPSSEEDRDEKESKAEIQNPEDYKEIFQPRNAISRT 395
Score = 59 (25.8 bits), Expect = 7.5e-19, Sum P(3) = 7.5e-19
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
L + D VN W + K + V + +++ I L S E ++ G G ++V+ E
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEA 94
Query: 353 AR 354
A+
Sbjct: 95 AK 96
Score = 58 (25.5 bits), Expect = 9.4e-19, Sum P(3) = 9.4e-19
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVY 348
S S D + WD+ + + + ++ +R L FS G+ L D +K++
Sbjct: 122 SGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLW 174
Score = 53 (23.7 bits), Expect = 3.6e-85, Sum P(4) = 3.6e-85
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 512 KCVKVYNALMPVKSVLLKKQTVQGKLGQTFRDL 544
KC Y L + +++ K + G+ G FR+L
Sbjct: 621 KCRLCYKQLKNISNIVKNKSGLSGRHGSAFREL 653
Score = 43 (20.2 bits), Expect = 1.2e-86, Sum P(4) = 1.2e-86
Identities = 21/78 (26%), Positives = 31/78 (39%)
Query: 707 PTKESEIYPTYVRKGPDMYGPQSQYAPTKENDYGSQSGDSMLGDHE--AETHEPSRYS-- 762
PT S + +Y R PQS+ + E++ S S + + E AE P Y
Sbjct: 327 PTGSS-LRRSYDRPSTSCSKPQSRVKHSSESERRSPSSEEDRDEKESKAEIQNPEDYKEI 385
Query: 763 MKPIPYSPSTPREYAKEP 780
+P TP + EP
Sbjct: 386 FQPRNAISRTP-PHINEP 402
Score = 40 (19.1 bits), Expect = 2.6e-79, Sum P(4) = 2.6e-79
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 297 SSSADRTVNFWDL 309
S++ D TV WDL
Sbjct: 164 SAADDHTVKLWDL 176
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 513 (185.6 bits), Expect = 8.0e-87, Sum P(3) = 8.0e-87
Identities = 91/188 (48%), Positives = 138/188 (73%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGG+D +VN+WA+ K NCIMSL+GH++ V +QF
Sbjct: 12 KLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQF 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ EE + AG SGS+++W+L + RTL GHK+SI+S+DFHP G+YL SGS+DS IKL
Sbjct: 72 NSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG---ASFHLTNTSIHVVD 183
WD+RRKGC++ Y+GH++++ + FSPDG+W+AS +D V++ A +T + H
Sbjct: 132 WDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSA 191
Query: 184 LSLV--HP 189
+++V HP
Sbjct: 192 VNVVQFHP 199
Score = 236 (88.1 bits), Expect = 2.7e-37, Sum P(4) = 2.7e-37
Identities = 47/152 (30%), Positives = 76/152 (50%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
M H AS++ L G+ LA+G D + LW + + C+ GH+ V + F +
Sbjct: 102 MGHKASISSLDF-HPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGK 160
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
L++ ++K+W+L + H S++ V FHP L SGS D +KLWDL +
Sbjct: 161 WLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEK 220
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGED 163
I + G + + S+ F+PDG + SG E+
Sbjct: 221 FNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN 252
Score = 234 (87.4 bits), Expect = 8.0e-87, Sum P(3) = 8.0e-87
Identities = 52/155 (33%), Positives = 82/155 (52%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S SADRTV WDLEKF+++ ++E + +R + F+ G CL G L+VYGWEP
Sbjct: 203 LLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVYGWEPD 262
Query: 354 RQYDAQPMGWGKVQDLAVTGTQLWFRRVGTWSHQDSGFSTLDSYSAGSPVSTM-GRERDQ 412
R +D +GWGKV DLA++ Q+ ++SH + + +D S + G +D+
Sbjct: 263 RCFDVVHVGWGKVSDLAISNNQMI---AVSYSHTNVSWYVVDLNRVKKSGSVIQGLIQDK 319
Query: 413 IVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESE 447
+P SA +G + + + + G+ SE
Sbjct: 320 PIPAPSSA-LGTTLRRNYERPTTSCTGQEMKQSSE 353
Score = 210 (79.0 bits), Expect = 1.0e-45, Sum P(3) = 1.0e-45
Identities = 45/155 (29%), Positives = 77/155 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++V C+ +V+A G + LW L + + +L GH + S+ F E L
Sbjct: 62 HTSAVGCIQFNSSEERVVA-GSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYL 120
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G +IK+W++ GH ++ + F P G +L S S DS +KLWDL
Sbjct: 121 ASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGK 180
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
I + H+ ++N ++F P+ +ASG D V++
Sbjct: 181 MITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKL 215
Score = 210 (79.0 bits), Expect = 3.6e-34, Sum P(3) = 3.6e-34
Identities = 76/273 (27%), Positives = 121/273 (44%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
+ H +V CLA G+ LA+ DD V LW L I + H++ V VQF E
Sbjct: 143 YKGHTQAVRCLAFSP-DGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNE 201
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L++G ++K+W+L + + G + SV F+P G L SGS ++ ++++
Sbjct: 202 YLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGS-ENTLRVYGWE 260
Query: 131 RKGCI-YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189
C + G K ++ + S + Q IA S+ TN S +VVDL+ V
Sbjct: 261 PDRCFDVVHVGWGK-VSDLAIS-NNQMIA-----------VSYSHTNVSWYVVDLNRVKK 307
Query: 190 LGTPPPQYTSSVPF-----SHNTSLRKSFTKGRPGGT----KAKIDVTRIEENAE----- 235
G+ P + T+LR+++ + T K + R E
Sbjct: 308 SGSVIQGLIQDKPIPAPSSALGTTLRRNYERPTTSCTGQEMKQSSEADRRSPEGERRSPS 367
Query: 236 SEDQAGEEELFATIANPCDYSAIFQPHRSLNRS 268
SED+ ++E A I NP DY IFQP ++R+
Sbjct: 368 SEDEKEDKESSAEITNPEDYKEIFQPRSVISRT 400
Score = 170 (64.9 bits), Expect = 8.0e-87, Sum P(3) = 8.0e-87
Identities = 31/64 (48%), Positives = 49/64 (76%)
Query: 782 NVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVDI 841
++W L+LC++ILP I++LLQS+YE Y+ T C +L LIL+ F P+I + + + S+GVDI
Sbjct: 587 SLWKLDLCTSILPQIEELLQSRYESYVQTGCMSLKLILKRFWPLISDTLN-APPSVGVDI 645
Query: 842 SKEE 845
++EE
Sbjct: 646 TREE 649
Score = 125 (49.1 bits), Expect = 2.2e-75, Sum P(3) = 2.2e-75
Identities = 32/111 (28%), Positives = 60/111 (54%)
Query: 393 TLDSYSAGSPV--STMGRERDQIVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMS 450
T + S PV +T + I+ + PIGL+ FL S+ + S+M + E ++
Sbjct: 470 TTSASSPSRPVVNTTKPKPSTGIILSTRNEPIGLNAGDFL--SHARNAKASAMGDEEALA 527
Query: 451 TIFNGHDKMMAVLRNRQRSLGLVYMAVNNKNMEAGIDTALSMNDGTVMIDL 501
I GHD M +L +R ++L V + +++ +D+A+SMND ++++D+
Sbjct: 528 QIRKGHDTMCVMLSSRSKNLDSVRSVWASGDVKTSLDSAVSMNDLSIVVDV 578
Score = 67 (28.6 bits), Expect = 4.0e-19, Sum P(3) = 4.0e-19
Identities = 19/72 (26%), Positives = 34/72 (47%)
Query: 278 RTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECL 337
+ S+S L PM ++ S S D + WD+ + V + ++ +R L FS G+ L
Sbjct: 105 KASISSLDFHPMGEYL--ASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWL 162
Query: 338 LGG-DTEGLKVY 348
D +K++
Sbjct: 163 ASASDDSTVKLW 174
Score = 62 (26.9 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQ 355
+ S ++ WDLE ++ T + ++I L F GE L G + + W+ R+
Sbjct: 80 AGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDS-NIKLWDVRRK 137
Score = 57 (25.1 bits), Expect = 4.3e-18, Sum P(3) = 4.3e-18
Identities = 14/62 (22%), Positives = 30/62 (48%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
L + D VN W + K + + + ++S + + F+ E ++ G G L+++ E
Sbjct: 35 LLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEA 94
Query: 353 AR 354
A+
Sbjct: 95 AK 96
Score = 55 (24.4 bits), Expect = 6.8e-18, Sum P(3) = 6.8e-18
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S+S D TV WDL +++ ++S + + F E LL + V W+
Sbjct: 164 SASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPN-EYLLASGSADRTVKLWD 217
Score = 54 (24.1 bits), Expect = 1.2e-74, Sum P(3) = 1.2e-74
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 510 YKKCVKVYNALMPVKSVLLKKQTVQGKLGQTFRDL 544
++KC Y L + +V+ + G+ G TFR+L
Sbjct: 651 HQKCKACYKQLKNLSNVVKNRAEQVGRHGSTFREL 685
Score = 44 (20.5 bits), Expect = 2.7e-37, Sum P(4) = 2.7e-37
Identities = 23/92 (25%), Positives = 38/92 (41%)
Query: 143 KSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVP 202
+S + R SP+G+ + ED +S +TN + + PP+ T P
Sbjct: 350 QSSEADRRSPEGERRSPSSEDEKEDKESSAEITNPEDYKEIFQPRSVISRTPPKTTEPFP 409
Query: 203 FSHNTSLRKSFTKGRPGGTKAKIDVTRIEENA 234
S +S + +PG KI VT + + A
Sbjct: 410 APLEHSFSESVLE-KPGPV-VKI-VTPVIDRA 438
Score = 39 (18.8 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
A DF++H + A+G + G D + C+M LS S ++SV+
Sbjct: 505 AGDFLSHARNAKASAMGDEEALAQIRKGHD----------TMCVM-LSSRSKNLDSVR 551
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 474 (171.9 bits), Expect = 2.6e-86, Sum P(4) = 2.6e-86
Identities = 81/162 (50%), Positives = 124/162 (76%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK +G++LATGGDD +VN+W++ + + L+GH+TP+ES+Q
Sbjct: 12 KLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRHDL-LTGHTTPIESLQI 70
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG ++ SGSLD+ IKL
Sbjct: 71 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL 130
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGCI+ Y+ H++++ +RFSPDG+W+AS +D V++
Sbjct: 131 WDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKL 172
Score = 212 (79.7 bits), Expect = 2.6e-86, Sum P(4) = 2.6e-86
Identities = 40/96 (41%), Positives = 62/96 (64%)
Query: 281 LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG 340
++++ P + ++L + SS+ T+ FWDLEKF +VS E+ ++ +R + F+ G CL GG
Sbjct: 191 VNVVEFHPSIEYLLASGSSS-MTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGG 249
Query: 341 DTEGLKVYGWEPARQYDAQPMGWGKVQDLAVTGTQL 376
+ L+VYGWEP R +D + WGKV DL+V QL
Sbjct: 250 FQDSLRVYGWEPERCFDVVVVNWGKVADLSVCHNQL 285
Score = 190 (71.9 bits), Expect = 1.6e-38, Sum P(4) = 1.6e-38
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H A++ C G +A+G D + LW + + CI H+ V ++F +
Sbjct: 101 LGHKANI-CSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGK 159
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSLDSFIKLWDLR 130
L++ ++K+W+L V GH + V+FHP +YL SGS I+ WDL
Sbjct: 160 WLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLE 219
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
+ + + + I F+PDG + G +D +
Sbjct: 220 KFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSL 254
Score = 165 (63.1 bits), Expect = 1.0e-35, Sum P(4) = 1.0e-35
Identities = 38/166 (22%), Positives = 73/166 (43%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + L + K +++ G + +W L + + +L GH + S+ F +
Sbjct: 61 HTTPIESLQISAKE-ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFV 119
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G IK+W++ H ++ + F P G +L S + D +KLWDL
Sbjct: 120 ASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 179
Query: 134 CIYTYRGHSKSINSIRFSPDGQWI-ASGGEDGVVRIG--ASFHLTN 176
++ + GH +N + F P +++ ASG +R FH+ +
Sbjct: 180 VMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVS 225
Score = 162 (62.1 bits), Expect = 2.6e-86, Sum P(4) = 2.6e-86
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 782 NVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVDI 841
++W L+LC+ +LP I+ LLQSKYE Y+ T C +L LIL+ F P+I + + + S+GVDI
Sbjct: 554 SLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILA-APPSVGVDI 612
Query: 842 SKEE 845
++EE
Sbjct: 613 TREE 616
Score = 131 (51.2 bits), Expect = 2.6e-86, Sum P(4) = 2.6e-86
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 406 MGRERDQIVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAVLRN 465
M R ++P + PIGL FLP +Q ++ +++ E+MS I GH + VL +
Sbjct: 449 MPRAEPSVIPAARNEPIGLKASDFLPAL--KNQSQAELTDEEIMSQIRKGHKTVCMVLTS 506
Query: 466 RQRSLGLVYMAVNNKNMEA---GIDTALSMNDGTVMIDL 501
R ++L V + +M+A +D A++ ND +V++DL
Sbjct: 507 RHKNLDTVRAVWSTSDMKARMNSVDAAVATNDLSVVVDL 545
Score = 107 (42.7 bits), Expect = 2.4e-75, Sum P(4) = 2.4e-75
Identities = 37/111 (33%), Positives = 53/111 (47%)
Query: 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSS-----VPFSHNTSLRKSFTKGRPGGTK 222
IG SF + S VVDLS V G+ P + P +SLR+S+ RP +
Sbjct: 286 IGVSFAQSTVSSFVVDLSRVTKSGSVPHGLLRNNELLAQPTPTGSSLRRSYD--RPSTSC 343
Query: 223 AKIDVTRIEENAE-----SEDQAGEEELFATIANPCDYSAIFQPHRSLNRS 268
+K + +E SE+ E+E A I NP DY IFQP +++R+
Sbjct: 344 SKPQRVKHSSESERRSPSSEEDRDEKESKAEIQNPEDYKEIFQPRNAISRT 394
Score = 72 (30.4 bits), Expect = 3.8e-26, Sum P(4) = 3.8e-26
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG 69
+F H VN + +LA+G + W L K + + + +TPV + F
Sbjct: 183 EFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPD 242
Query: 70 EETLSAGCQSGSIKIW 85
L G Q S++++
Sbjct: 243 GCCLYGGFQD-SLRVY 257
Score = 58 (25.5 bits), Expect = 4.9e-18, Sum P(3) = 4.9e-18
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVY 348
S S D + WD+ + + + ++ +R L FS G+ L D +K++
Sbjct: 121 SGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLW 173
Score = 54 (24.1 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG--DTEGLKVYGWE 351
L + S ++ WDLE ++ T + + I L F G + G DT+ +K+ W+
Sbjct: 76 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTD-IKL--WD 132
Query: 352 PARQ 355
R+
Sbjct: 133 VRRK 136
Score = 53 (23.7 bits), Expect = 6.4e-75, Sum P(4) = 6.4e-75
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 512 KCVKVYNALMPVKSVLLKKQTVQGKLGQTFRDL 544
KC Y L + +++ K + G+ G FR+L
Sbjct: 620 KCRLCYKQLKNISNIVKNKSGLSGRHGSAFREL 652
Score = 50 (22.7 bits), Expect = 2.2e-69, Sum P(4) = 2.2e-69
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S++ D TV WDL ++ + + + F E LL + + + W+
Sbjct: 163 SAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWD 217
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 533 (192.7 bits), Expect = 5.7e-74, Sum P(4) = 5.7e-74
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG+++ SGS D+ IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ YRGHS+++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
Score = 196 (74.1 bits), Expect = 2.5e-21, Sum P(3) = 2.5e-21
Identities = 49/193 (25%), Positives = 81/193 (41%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
M H A++ C G+ +A+G D + LW + + C+ GHS V ++F +
Sbjct: 102 MGHKANI-CSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
L++ ++K+W+L + GH + V+FHP L SGS D I+ WDL +
Sbjct: 161 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLG 191
+ G +R++ G W+ V +G + + H SL L
Sbjct: 221 FQVVSCIEGEP---GPVRYA--GSWVVGLSPPPKV-VGCRYGAGVSRSHHRSCSLFPGLP 274
Query: 192 TPPPQYTSSVPFS 204
T P + P S
Sbjct: 275 TAFPDFLRPTPHS 287
Score = 190 (71.9 bits), Expect = 9.3e-26, Sum P(4) = 9.3e-26
Identities = 40/154 (25%), Positives = 73/154 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + V + L +++ G + +W L + + +L GH + S+ F E +
Sbjct: 62 HTSPVESVRLNTPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G Q +IK+W++ GH ++ + F P G +L S + D +KLWDL
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
+ + GH+ +N + F P+ +ASG D +R
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Score = 129 (50.5 bits), Expect = 5.7e-74, Sum P(4) = 5.7e-74
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 326 RRLTFSEGGECLLGGDTEGLKVYGWEPARQYDAQPMGWGKVQDLAVTGTQL 376
R + F+ G CL G + L+VYGWEP R +D + WGKV DLAV QL
Sbjct: 291 RSVLFNPDGCCLYSGCQDSLRVYGWEPERCFDVVLVSWGKVADLAVCNDQL 341
Score = 119 (46.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 74/288 (25%), Positives = 110/288 (38%)
Query: 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVE---SVQF 66
+F H VN + +LA+G D+ + W L K + + G PV S
Sbjct: 184 EFPGHTGPVNVVEFHPNE-YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGSWVV 242
Query: 67 GNGEETLSAGCQSG---------SIKIWN---LAVPTVQRTLNGHKSSITSVDFHPYGDY 114
G GC+ G S ++ A P R H SV F+P G
Sbjct: 243 GLSPPPKVVGCRYGAGVSRSHHRSCSLFPGLPTAFPDFLRP-TPHSRLPRSVLFNPDGCC 301
Query: 115 LCSGSLDSF-IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173
L SG DS + W+ R C + + D IG +F
Sbjct: 302 LYSGCQDSLRVYGWEPER--CFDVVLVSWGKVADLAVCNDQL------------IGVAFS 347
Query: 174 LTNTSIHVVDLSLVHPLGT---PPPQYTSSV---PFSHNTSLRKSFTKGRPGGTKAKIDV 227
+N S +VVDL+ V GT P Q + + P + LR+ + + K +
Sbjct: 348 QSNVSSYVVDLTRVTRTGTVAQDPVQDSRPLAQQPAHPSAPLRRIYERPSTACNKPQ--- 404
Query: 228 TRIEENAESE-------DQAGEEELFATIANPCDYSAIFQPHRSLNRS 268
R+++N+ESE D E E A I N +Y+ IFQP S++R+
Sbjct: 405 -RVKQNSESERRSPSSEDDRDERESRAEIQNTEEYNEIFQPKNSISRT 451
Score = 90 (36.7 bits), Expect = 5.7e-74, Sum P(4) = 5.7e-74
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326
L S S+DRT+ FWDLEKF +VS E +R
Sbjct: 203 LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVR 235
Score = 53 (23.7 bits), Expect = 5.7e-74, Sum P(4) = 5.7e-74
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 413 IVPMNLSAPIGLDMEQFLPKSYQTHQGKS-SMSESELMSTIFNGH 456
I+P + PIGL FLP S G+ S+ + S + GH
Sbjct: 510 IIPATRNEPIGLKASDFLPVSGGPAPGQGGSLWGKDRTSPLAPGH 554
Score = 50 (22.7 bits), Expect = 1.1e-57, Sum P(3) = 1.1e-57
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S++ D TV WDL ++S ++ + + F E LL + + W+
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWD 217
Score = 38 (18.4 bits), Expect = 2.1e-72, Sum P(4) = 2.1e-72
Identities = 14/74 (18%), Positives = 29/74 (39%)
Query: 697 QEKPSVDFEVPTKESEIYPTYVRKGPDMYGPQ---SQYAPTKENDYGSQSGDSMLGDHEA 753
+ PS + + +ES + +++ P+ S+ P + + + D M E
Sbjct: 414 RRSPSSEDDRDERESRAEIQNTEEYNEIFQPKNSISRTPPRRSEPFPAPPEDDMATAKEV 473
Query: 754 ETHEPSRYSMKPIP 767
P+ S P+P
Sbjct: 474 AKPSPATDSQFPVP 487
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 539 (194.8 bits), Expect = 1.6e-70, Sum P(3) = 1.6e-70
Identities = 88/162 (54%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++F+AH A+VNCL +G+KS +VL TGG+D KVNLWA+GK N I+SL GHS+ ++SV F
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF 67
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
E ++AG SG+IK+W+L + RTL GH+S+ SVDFHP+G++ SGSLD+ +K+
Sbjct: 68 DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+R+KGCI+TY+GH++ +N +RF+PDG+W+ SGGED +V++
Sbjct: 128 WDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKV 169
Score = 201 (75.8 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 42/153 (27%), Positives = 76/153 (49%)
Query: 15 GASVNCLALG-KKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEET 72
G NC+++ G+ A+G D + +W + K CI + GH+ V ++F +G
Sbjct: 99 GHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWV 158
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+S G + +K+W+L + H+ I S+DFHP+ L +GS D +K WDL
Sbjct: 159 VSGG-EDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETF 217
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
I + + + + F+PDG+ + G ++ +
Sbjct: 218 ELIGSGGPETAGVRCLSFNPDGKTVLCGLQESL 250
Score = 184 (69.8 bits), Expect = 1.6e-70, Sum P(3) = 1.6e-70
Identities = 56/174 (32%), Positives = 88/174 (50%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
F+L T S ADRTV FWDLE F L+ + ++ +R L+F+ G+ +L G E LK++ WE
Sbjct: 198 FLLATGS-ADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWE 256
Query: 352 PARQYDAQPMGWGKVQDLAVTGTQLW---FRR--VGTW----SHQDSGFSTLDSYSAGSP 402
P R +D +GW ++ D+ V +L + + VG W S + + + S G P
Sbjct: 257 PIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSRTEPCMAGDTAQSNGHP 316
Query: 403 VSTMGRERDQIV--PMNLSAPIG-LDMEQFL-PKSYQTHQ-GKSSMSESELMST 451
RD +V N +G L + Q + P +T G+ S+S++ ST
Sbjct: 317 EKRSCSGRDPVVLNDNNSKTVLGKLSVSQNVDPLLKETKSLGRLSVSQNSDPST 370
Score = 182 (69.1 bits), Expect = 9.2e-29, Sum P(3) = 9.2e-29
Identities = 40/154 (25%), Positives = 73/154 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + ++ + S ++A G + LW L ++ + +L+GH + SV F E
Sbjct: 58 HSSGIDSVTFDA-SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFF 116
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G ++KIW++ T GH + + F P G ++ SG D+ +K+WDL
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGK 176
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
+ ++ H I S+ F P +A+G D V+
Sbjct: 177 LLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVK 210
Score = 104 (41.7 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 39/179 (21%), Positives = 73/179 (40%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
+ H VN L G+ + +GG+D V +W L + H ++S+ F E
Sbjct: 139 YKGHTRGVNVLRF-TPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE 197
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L+ G ++K W+L + + + + + F+P G + G +S +K++
Sbjct: 198 FLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQES-LKIFSWE 256
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189
C + G + R S +G + +G S++ + + VVDLS P
Sbjct: 257 PIRC---HDG--VDVGWSRLSD------MNVHEGKL-LGCSYNQSCVGVWVVDLSRTEP 303
Score = 92 (37.4 bits), Expect = 1.6e-70, Sum P(3) = 1.6e-70
Identities = 19/67 (28%), Positives = 41/67 (61%)
Query: 779 EPDNVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIG 838
E + + L+ C+++LP++ LL S + +++ + D L ++R +G I +++ + S+G
Sbjct: 727 ERNEILTLDNCTSLLPLLTALLGSGMDQHLSVSLDLLLKLVRLYGSPIYSSLS-APASVG 785
Query: 839 VDISKEE 845
VDI E+
Sbjct: 786 VDIEAEQ 792
Score = 61 (26.5 bits), Expect = 2.9e-67, Sum P(3) = 2.9e-67
Identities = 19/91 (20%), Positives = 41/91 (45%)
Query: 438 QGKSSMSESELMSTIFNGHDKMMAVLRNRQRSLGLVYMAVNNKNMEAGIDTALSMNDGTV 497
QG S SE ++ I H++ ++ +++R L +V +++ I + M D V
Sbjct: 658 QGIDSPSEENIVEDIMGKHNQFVSSMQSRLAKLQVVRRYWERNDVKNSIGSIEKMADNAV 717
Query: 498 MIDLFKSMLGQGYKKCVKVYNALMPVKSVLL 528
D+ + + + +L+P+ + LL
Sbjct: 718 TADVLGIITERNEILTLDNCTSLLPLLTALL 748
Score = 47 (21.6 bits), Expect = 3.6e-56, Sum P(3) = 3.6e-56
Identities = 15/55 (27%), Positives = 22/55 (40%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S D V WDL L++ + + I+ L F E LL + V W+
Sbjct: 160 SGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPH-EFLLATGSADRTVKFWD 213
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 538 (194.4 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++F+AH A+VNCL +G+KS +VL TGG+D KVNLWA+GK N I+SL GHS+ ++SV F
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF 67
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
E ++AG SG+IK+W+L V RTL GH+S+ SV+FHP+G++ SGSLD+ +K+
Sbjct: 68 DASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKI 127
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+R+KGCI+TY+GH++ +N +RF+PDG+WI SGGED VV++
Sbjct: 128 WDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKV 169
Score = 202 (76.2 bits), Expect = 4.2e-16, Sum P(3) = 4.2e-16
Identities = 40/152 (26%), Positives = 74/152 (48%)
Query: 15 GASVNCLALG-KKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
G NC+++ G+ A+G D + +W + K CI + GH+ V ++F +
Sbjct: 99 GHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWI 158
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+G + +K+W+L + H+ I S+DFHP+ L +GS D +K WDL
Sbjct: 159 VSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFE 218
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
I + + + + F+PDG+ + G ++ +
Sbjct: 219 LIGSGGTETTGVRCLTFNPDGKSVLCGLQESL 250
Score = 193 (73.0 bits), Expect = 4.7e-30, Sum P(3) = 4.7e-30
Identities = 41/154 (26%), Positives = 73/154 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + ++ + G V A G + LW L ++ + +L+GH + SV F E
Sbjct: 58 HSSGIDSVTFDASEGLV-AAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFF 116
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G ++KIW++ T GH + + F P G ++ SG D+ +K+WDL
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGK 176
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
++ ++ H I S+ F P +A+G D V+
Sbjct: 177 LLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVK 210
Score = 185 (70.2 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 46/129 (35%), Positives = 67/129 (51%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
F+L T S AD+TV FWDLE F L+ + ++ +R LTF+ G+ +L G E LK++ WE
Sbjct: 198 FLLATGS-ADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIFSWE 256
Query: 352 PARQYDAQPMGWGKVQDLAVTGTQLW---FRR--VGTWSHQDSGFSTLD---SYSAGSPV 403
P R +D +GW + D+ V +L + + VG W S + + S P
Sbjct: 257 PIRCHDGVDVGWSNLSDMNVHEGKLLGCSYNQNCVGVWVVDLSRTEPMSGGATQSNSHPE 316
Query: 404 STMGRERDQ 412
T G RDQ
Sbjct: 317 KTSGSGRDQ 325
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 40/189 (21%), Positives = 75/189 (39%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
+ H VN L G+ + +GG+D V +W L + H ++S+ F E
Sbjct: 139 YKGHTRGVNVLRF-TPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE 197
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L+ G ++K W+L + + + + + F+P G + G +S +K++
Sbjct: 198 FLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQES-LKIFSWE 256
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL 190
C H ++ + +S G+ +G S++ + VVDLS P+
Sbjct: 257 PIRC------HD-GVD-VGWSNLSDMNVHEGK----LLGCSYNQNCVGVWVVDLSRTEPM 304
Query: 191 GTPPPQYTS 199
Q S
Sbjct: 305 SGGATQSNS 313
Score = 92 (37.4 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 19/67 (28%), Positives = 39/67 (58%)
Query: 779 EPDNVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIG 838
E + L+ C+++LP++ LL S + +++ D L ++R +G I +++ + S+G
Sbjct: 729 ERPEILTLDTCTSLLPLLTALLGSNMDSHLSVCLDLLLKLVRMYGSQIYSSLS-APSSVG 787
Query: 839 VDISKEE 845
VDI E+
Sbjct: 788 VDIEAEQ 794
Score = 72 (30.4 bits), Expect = 2.3e-68, Sum P(3) = 2.3e-68
Identities = 20/91 (21%), Positives = 44/91 (48%)
Query: 438 QGKSSMSESELMSTIFNGHDKMMAVLRNRQRSLGLVYMAVNNKNMEAGIDTALSMNDGTV 497
QG +S SE ++++ I HD+ ++ + +R L +V +++ I + M D V
Sbjct: 660 QGITSASEEDIVADIMGQHDQFVSSMHSRLAKLQVVRRYWERNDIKNSISSIEKMADNAV 719
Query: 498 MIDLFKSMLGQGYKKCVKVYNALMPVKSVLL 528
+ D+ + + + +L+P+ + LL
Sbjct: 720 IADVLLIVNERPEILTLDTCTSLLPLLTALL 750
Score = 46 (21.3 bits), Expect = 6.6e-56, Sum P(3) = 6.6e-56
Identities = 15/55 (27%), Positives = 21/55 (38%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S D V WDL L+ + + I+ L F E LL + V W+
Sbjct: 160 SGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPH-EFLLATGSADKTVKFWD 213
Score = 40 (19.1 bits), Expect = 2.8e-55, Sum P(3) = 2.8e-55
Identities = 23/92 (25%), Positives = 38/92 (41%)
Query: 192 TPPPQYT-SSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIA 250
+PP + +S S+N + S T+ R GG + + R E + G ++
Sbjct: 579 SPPRNHDENSDLISYNANRDSSPTESRKGGRLHSLVLNR-ERRGRFSNFEGPVSS-SSGG 636
Query: 251 NPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLS 282
N ++ +P L + G VPV TS S
Sbjct: 637 NMTAPNS--RPSNMLKQRGNHVPVDQGITSAS 666
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 493 (178.6 bits), Expect = 1.3e-63, Sum P(3) = 1.3e-63
Identities = 82/162 (50%), Positives = 124/162 (76%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++F+AH +VNCL++GKK+ ++L TGGDD KVNLW++GK+ MSL GH++PV+SV F
Sbjct: 7 KLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAF 66
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ E + AG SG IK+W+L + R GH+S+ ++V+FHP+G++L SGS D+ +++
Sbjct: 67 NSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRV 126
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD R+KGCI TY+GH++ I++I FSPDG+W+ SGG D VV++
Sbjct: 127 WDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKV 168
Score = 230 (86.0 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 49/153 (32%), Positives = 77/153 (50%)
Query: 15 GASVNCLALG-KKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEET 72
G NC A+ G+ LA+G D + +W K CI + GH+ + +++F +G
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWV 157
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+S G + +K+W+L + H+ I S+DFHP L +GS D +K WDL
Sbjct: 158 VSGGLDN-VVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETF 216
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
I T R + + +I F PDGQ + G +DG+
Sbjct: 217 ELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGL 249
Score = 207 (77.9 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 46/167 (27%), Positives = 85/167 (50%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + V+ +A + VLA G + LW L +S + + +GH + +V+F E L
Sbjct: 57 HTSPVDSVAFNSEEVLVLA-GASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFL 115
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G ++++W+ +T GH I++++F P G ++ SG LD+ +K+WDL
Sbjct: 116 ASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGK 175
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG--ASFHLTNTS 178
++ ++ H I S+ F P +A+G D V+ +F L T+
Sbjct: 176 LLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTT 222
Score = 198 (74.8 bits), Expect = 1.3e-63, Sum P(3) = 1.3e-63
Identities = 46/115 (40%), Positives = 58/115 (50%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
F+L T S ADRTV FWDLE F L+ TT ++ +R + F G+ L G +GLKVY WE
Sbjct: 197 FLLATGS-ADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSWE 255
Query: 352 PARQYDAQPMGWGKVQDLAVT-----GTQLWFRRVGTWSHQDSGFSTLDSYSAGS 401
P D MGW + D + G + VG W S S L+ Y A S
Sbjct: 256 PVICRDGVDMGWSTLGDFCINEGKFIGCSYYRNSVGIWV---SDISELEPYGAVS 307
Score = 123 (48.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 41/183 (22%), Positives = 76/183 (41%)
Query: 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN 68
+ + H ++ + G+ + +GG D V +W L + H P+ S+ F
Sbjct: 136 QTYKGHTRGISTIEFSP-DGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHP 194
Query: 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
E L+ G ++K W+L + T + + ++ FHP G L G LD +K++
Sbjct: 195 LEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCG-LDDGLKVYS 253
Query: 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVH 188
C + + +S G + + G+ IG S++ + I V D+S +
Sbjct: 254 WEPVIC--------RDGVDMGWSTLGDFCINEGKF----IGCSYYRNSVGIWVSDISELE 301
Query: 189 PLG 191
P G
Sbjct: 302 PYG 304
Score = 79 (32.9 bits), Expect = 1.3e-63, Sum P(3) = 1.3e-63
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 779 EPDNVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIG 838
E + L++ S ++PV+ LL S+ E + + D L ++ FG VI++ + + +G
Sbjct: 913 EKIEILTLDMFSQLVPVLTSLLGSRTERPVNVSLDMLLKLVAVFGTVIRSTVS-APRIVG 971
Query: 839 VDISKEE 845
VD+ E
Sbjct: 972 VDLHANE 978
Score = 65 (27.9 bits), Expect = 3.9e-62, Sum P(3) = 3.9e-62
Identities = 23/124 (18%), Positives = 52/124 (41%)
Query: 411 DQIVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSE--SELMSTIFNGHDKMMAVLRNRQR 468
DQ+ M L ++ Q + S E S++ + H++ ++ L++R
Sbjct: 815 DQVADMTLDETHATQIQPACDNMPQKEEPNISDREDDSDITENLMLTHNEFLSTLQSRLT 874
Query: 469 SLGLVYMAVNNKNMEAGIDTALSMNDGTVMIDLFKSMLGQGYKKCVKVYNALMPVKSVLL 528
L +V +++ I + D +V D+ + + + +++ L+PV + LL
Sbjct: 875 KLQIVRHFWERSDVKGAIGALRKLTDQSVQADVISILTEKIEILTLDMFSQLVPVLTSLL 934
Query: 529 KKQT 532
+T
Sbjct: 935 GSRT 938
>FB|FBgn0040207 [details] [associations]
symbol:kat80 "katanin 80" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;NAS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0008017 "microtubule
binding" evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 GO:GO:0051013 HSSP:P16649
GO:GO:0008352 PANTHER:PTHR19845 FlyBase:FBgn0040207 EMBL:AF223065
ProteinModelPortal:Q9NHF0 PRIDE:Q9NHF0 InParanoid:Q9NHF0
ArrayExpress:Q9NHF0 Bgee:Q9NHF0 Uniprot:Q9NHF0
Length = 823
Score = 378 (138.1 bits), Expect = 3.6e-57, Sum P(4) = 3.6e-57
Identities = 71/168 (42%), Positives = 108/168 (64%)
Query: 2 RAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPV 61
R + K D AH + V L LG+ +G+VL TGG+D+ VNLWA+G++ C MSL+GH+ +
Sbjct: 5 RKLISKIYDIKAHDSRVTSLDLGE-TGRVLVTGGEDRNVNLWAIGQNECFMSLTGHNRSI 63
Query: 62 ESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD 121
+ V+F + + + G I+ W+L + TLNGH S ++DF+P G+Y+ SGS D
Sbjct: 64 DCVRFAYKDNFVYSADDIGIIRRWDLNSQKIYSTLNGHMKSGRTLDFNPSGEYVVSGSND 123
Query: 122 SFIKLWDLRRKG-CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ ++LWD++ + CI RGH +NS++FSPDG WIAS G +G + I
Sbjct: 124 TTVRLWDVQNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILI 171
Score = 185 (70.2 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 50/172 (29%), Positives = 90/172 (52%)
Query: 27 SGQVLATGGDDKKVNLWAL-GKSNCIMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKI 84
SG+ + +G +D V LW + ++NCI GH + V SV+F +G SAG + GSI I
Sbjct: 113 SGEYVVSGSNDTTVRLWDVQNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLE-GSILI 171
Query: 85 WNL--AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI-YTYRGH 141
W++ + ++ + ++IT V FHP+ L +G +D + ++DL + + T +
Sbjct: 172 WDIRKSKQIMEFIADPPVTAITCVQFHPFEFLLAAGRVDGTVSIYDLEHQQLVSQTTHFY 231
Query: 142 SKSINSIRFSPDGQWIASGGEDGVVRIGAS-----FHLTNTSIHVVDLSLVH 188
++I I FS +G+ + G G+ IG H+ +T + D+ +V+
Sbjct: 232 GQAIRCITFSDNGECLFVGSSSGISVIGWEPDRELDHIKSTWSFLADMKVVN 283
Score = 168 (64.2 bits), Expect = 3.6e-57, Sum P(4) = 3.6e-57
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 779 EPDNVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNM-KWSGGSI 837
E + WNL+ C +LP I +LLQS+++ + T ACDTL +IL F P I+ N+ W+ +
Sbjct: 719 EKPSSWNLDFCMFVLPEIYELLQSQHKFHFTRACDTLRIILSNFLPTIQENLDSWAANGL 778
Query: 838 GVDISKEE 845
GVD+++E+
Sbjct: 779 GVDVTRED 786
Score = 156 (60.0 bits), Expect = 3.6e-57, Sum P(4) = 3.6e-57
Identities = 34/84 (40%), Positives = 45/84 (53%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVS-TTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEP 352
L + D TV+ +DLE LVS TT IR +TFS+ GECL G + G+ V GWEP
Sbjct: 203 LLAAGRVDGTVSIYDLEHQQLVSQTTHFYGQAIRCITFSDNGECLFVGSSSGISVIGWEP 262
Query: 353 ARQYDAQPMGWGKVQDLAVTGTQL 376
R+ D W + D+ V +L
Sbjct: 263 DRELDHIKSTWSFLADMKVVNNKL 286
Score = 156 (60.0 bits), Expect = 5.1e-32, Sum P(4) = 5.1e-32
Identities = 42/166 (25%), Positives = 74/166 (44%)
Query: 9 EDFMA---HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E FM+ H S++C+ K V + D + W L +L+GH ++
Sbjct: 51 ECFMSLTGHNRSIDCVRFAYKDNFVYSAD-DIGIIRRWDLNSQKIYSTLNGHMKSGRTLD 109
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPT-VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFI 124
F E + +G ++++W++ + GH S + SV F P G ++ S L+ I
Sbjct: 110 FNPSGEYVVSGSNDTTVRLWDVQNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSI 169
Query: 125 KLWDLRRKGCIYTYRGHSK--SINSIRFSPDGQWIASGGEDGVVRI 168
+WD+R+ I + +I ++F P +A+G DG V I
Sbjct: 170 LIWDIRKSKQIMEFIADPPVTAITCVQFHPFEFLLAAGRVDGTVSI 215
Score = 118 (46.6 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 68/261 (26%), Positives = 115/261 (44%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHS--TPVESVQFGNGEE 71
H + VN + G +A+ G + + +W + KS IM T + VQF E
Sbjct: 144 HMSHVNSVKFSP-DGLWIASAGLEGSILIWDIRKSKQIMEFIADPPVTAITCVQFHPFEF 202
Query: 72 TLSAGCQSGSIKIWNLA-VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L+AG G++ I++L V +T + + +I + F G+ L GS S I +
Sbjct: 203 LLAAGRVDGTVSIYDLEHQQLVSQTTHFYGQAIRCITFSDNGECLFVGS-SSGISVIGWE 261
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNT-SIHVVDLSLVHP 189
+ H KS S F D + + + ++ H +T SI+ + L V P
Sbjct: 262 PDREL----DHIKSTWS--FLADMKVVNN-------KLICGCHEIDTVSINTISLDRVIP 308
Query: 190 LGTPPPQYTSSVP-FSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFAT 248
PP +S+P F HN++ RKSFT+G K ++ V + E+ G++ +
Sbjct: 309 FYQPP----NSLPNFKHNSTNRKSFTRGNQ---KFRLSVGGAKPAQVQEEHEGDK---SG 358
Query: 249 IANPCDYSAIFQPHRSLNRSG 269
+++P +YS R L +G
Sbjct: 359 LSSP-NYSLEVVNERLLEVAG 378
Score = 56 (24.8 bits), Expect = 8.5e-22, Sum P(4) = 8.5e-22
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 135 IYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
IY + H + S+ G+ + +GGED V + A
Sbjct: 11 IYDIKAHDSRVTSLDLGETGRVLVTGGEDRNVNLWA 46
Score = 54 (24.1 bits), Expect = 3.6e-57, Sum P(4) = 3.6e-57
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 456 HDKMMAVLRNRQRSLGLVYMAVNNKNMEAGIDTALSMNDGTVMIDLFKSML 506
H+ ++ L NRQ SL L+ A + ++ + A S ++ IDL ++L
Sbjct: 669 HEAVLQELSNRQSSLDLLRHATRSHDVLGALRQARSCGK-SIFIDLLGAIL 718
Score = 54 (24.1 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 307 WDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
WDL + ST + + R L F+ GE ++ G +
Sbjct: 87 WDLNSQKIYSTLNGHMKSGRTLDFNPSGEYVVSGSND 123
Score = 54 (24.1 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 297 SSSADRTVNFWDLE-KFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S S D TV WD++ + + + + S + + FS G + EG + W+
Sbjct: 119 SGSNDTTVRLWDVQNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEG-SILIWD 173
Score = 44 (20.5 bits), Expect = 3.9e-56, Sum P(4) = 3.9e-56
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 728 QSQYAPTKEN--DYGSQSG--DSMLG--DHEAETHEPSRYSMKPI 766
Q +Y+ +N YGS G D+ L + + H+P Y++ P+
Sbjct: 421 QGKYSRVPDNMASYGSSYGAIDTRLMSLNEPSSLHKPDIYNLYPL 465
Score = 38 (18.4 bits), Expect = 1.6e-55, Sum P(4) = 1.6e-55
Identities = 14/62 (22%), Positives = 27/62 (43%)
Query: 557 TAKFLSSRNLREKEDRIGESQPFRGRTLSVQDKIYFGFDFRSGQSLSSTFFENFALNIDI 616
T +S + +E +I + QP R + D F RS +++ N ++D+
Sbjct: 629 TLDMRTSHQAKTQEKQIHQQQPMNNRI--IMDDHDFDMLSRSHEAVLQEL-SNRQSSLDL 685
Query: 617 VR 618
+R
Sbjct: 686 LR 687
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 533 (192.7 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 90/162 (55%), Positives = 129/162 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG+++ SGS D+ IKL
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 131
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+RRKGC++ YRGHS+++ +RFSPDG+W+AS +D V++
Sbjct: 132 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 173
Score = 184 (69.8 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 39/150 (26%), Positives = 71/150 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + V + L +++ G + +W L + + +L GH + S+ F E +
Sbjct: 62 HTSPVESVRLNTPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G Q +IK+W++ GH ++ + F P G +L S + D +KLWDL
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGED 163
+ + GH+ +N + F P+ +ASG D
Sbjct: 181 MMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 48 (22.0 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
S++ D TV WDL ++S ++ + + F L G ++
Sbjct: 164 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 537 (194.1 bits), Expect = 1.5e-53, Sum P(2) = 1.5e-53
Identities = 92/166 (55%), Positives = 130/166 (78%)
Query: 3 AKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVE 62
A V E+ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVE
Sbjct: 12 AAVAAVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVE 71
Query: 63 SVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS 122
SV+ EE + AG QSGSI++W+L + RTL GHK++I S+DFHPYG+++ SGS D+
Sbjct: 72 SVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT 131
Query: 123 FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
IKLWD+RRKGC++ YRGHS+++ +RFSPDG+W+AS +D V++
Sbjct: 132 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKL 177
Score = 167 (63.8 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 35/140 (25%), Positives = 66/140 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + V + L +++ G + +W L + + +L GH + S+ F E +
Sbjct: 66 HTSPVESVRLNTPE-ELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV 124
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G Q +IK+W++ GH ++ + F P G +L S + D +KLWDL
Sbjct: 125 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 184
Query: 134 CIYTYRGHSKSINSIRFSPD 153
+ + GH+ +N + F P+
Sbjct: 185 MMSEFPGHTGPVNVVEFHPN 204
Score = 43 (20.2 bits), Expect = 1.5e-53, Sum P(2) = 1.5e-53
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTF 330
S++ D TV WDL ++S ++ + + F
Sbjct: 168 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 201
>UNIPROTKB|F1RF38 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031117 "positive regulation of microtubule depolymerization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0008352
"katanin complex" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
GO:GO:0008352 PANTHER:PTHR19845 OMA:NAISRTP GO:GO:0031117
EMBL:CU467555 Ensembl:ENSSSCT00000003113 Uniprot:F1RF38
Length = 521
Score = 215 (80.7 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 80/269 (29%), Positives = 117/269 (43%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H +V CL G+ LA+ DD V LW L + GH+ PV V+F E L
Sbjct: 3 HSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 61
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF-IKLWDLRRK 132
++G +I+ W+L V + G + SV F+P G L SG DS + W+ R
Sbjct: 62 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPER- 120
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGT 192
C + + + D IG +F +N S +VVDL+ V GT
Sbjct: 121 -CFDVVLVNWGKVADLAICNDQL------------IGVAFSQSNVSSYVVDLTRVTRTGT 167
Query: 193 ---PPPQYTSSV---PFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESE-------DQ 239
P Q + + P + LR+ + RP +K R+++N+ESE D
Sbjct: 168 VAQDPVQDSRPLAQQPPHPSAPLRRIYE--RPSTACSKPQ--RVKQNSESERRSPSSEDD 223
Query: 240 AGEEELFATIANPCDYSAIFQPHRSLNRS 268
E E A I N DY+ IFQP S++R+
Sbjct: 224 RDERESRAEIQNTEDYNEIFQPKNSISRT 252
Score = 213 (80.0 bits), Expect = 1.7e-34, Sum P(3) = 1.7e-34
Identities = 40/83 (48%), Positives = 51/83 (61%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S+DRT+ FWDLEKF +VS E +R + F+ G CL G + L+VYGWEP
Sbjct: 60 LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPE 119
Query: 354 RQYDAQPMGWGKVQDLAVTGTQL 376
R +D + WGKV DLA+ QL
Sbjct: 120 RCFDVVLVNWGKVADLAICNDQL 142
Score = 166 (63.5 bits), Expect = 1.7e-34, Sum P(3) = 1.7e-34
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 782 NVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVDI 841
++W L+LC+ ILP I+ LL+SKYE Y+ T C +L LIL+ F P+I +M + S+GVDI
Sbjct: 415 SLWKLDLCTTILPQIEKLLKSKYESYVQTGCTSLKLILKRFLPLI-TDMLAAPPSVGVDI 473
Query: 842 SKEE 845
S+EE
Sbjct: 474 SREE 477
Score = 166 (63.5 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115
GHS V ++F + L++ ++K+W+L + GH + V+FHP L
Sbjct: 2 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 61
Query: 116 CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
SGS D I+ WDL + + G + S+ F+PDG + SG +D +
Sbjct: 62 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 111
Score = 137 (53.3 bits), Expect = 1.8e-31, Sum P(3) = 1.8e-31
Identities = 35/119 (29%), Positives = 63/119 (52%)
Query: 413 IVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAVLRNRQRSLGL 472
I+P + PIGL FLP + + Q + E + MS I GHD M VL +R ++L
Sbjct: 320 IIPATRNEPIGLKASDFLP-AVKIPQQVELLDE-DAMSQIRKGHDTMCVVLTSRHKNLDT 377
Query: 473 VYMAVNNKNMEAGIDTALSMNDGTVMIDLFKSMLGQGYKKCVKVYNALMPVKSVLLKKQ 531
V+ A +++ +D+A+++ND +V++DL + + + + ++P LLK +
Sbjct: 378 VWAAWTTGDIKTSVDSAVAINDLSVVVDLLNIVNQKASLWKLDLCTTILPQIEKLLKSK 436
Score = 122 (48.0 bits), Expect = 1.7e-34, Sum P(3) = 1.7e-34
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 98 GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWI 157
GH ++ + F P G +L S + D +KLWDL + + GH+ +N + F P+ +
Sbjct: 2 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 61
Query: 158 ASGGEDGVVR 167
ASG D +R
Sbjct: 62 ASGSSDRTIR 71
Score = 95 (38.5 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+GHS+++ +RFSPDG+W+AS +D V++
Sbjct: 1 QGHSQAVRCLRFSPDGKWLASAADDHTVKL 30
Score = 53 (23.7 bits), Expect = 8.4e-23, Sum P(3) = 8.4e-23
Identities = 22/105 (20%), Positives = 44/105 (41%)
Query: 440 KSSMSESELMSTIFNGHDKMMAVLRNRQRSLGLVYMAVNNKNMEAGIDTALSMNDGTVMI 499
K+S+ + +L +TI +K++ G + + K I L+ +V +
Sbjct: 413 KASLWKLDLCTTILPQIEKLLKSKYESYVQTGCTSLKLILKRFLPLITDMLAAPP-SVGV 471
Query: 500 DLFKSMLGQGYKKCVKVYNALMPVKSVLLKKQTVQGKLGQTFRDL 544
D+ + + KC Y L + + K ++ G+ G FR+L
Sbjct: 472 DISRE---ERLHKCRLCYKQLKSISGFVKSKSSLSGRHGSAFREL 513
Score = 50 (22.7 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S++ D TV WDL ++S ++ + + F E LL + + W+
Sbjct: 21 SAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWD 74
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 262 (97.3 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 57/163 (34%), Positives = 82/163 (50%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E + F H + +A G+ L +G DD + LW L S SL HS V +V
Sbjct: 993 ELQQTFKGHDLWIRAVAFSP-DGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVA 1051
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F ++ L++ +IK+W+ A +QRTL GH + SV F P G L S S D IK
Sbjct: 1052 FSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIK 1111
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
LW+ T G S ++S+ FSPDG+ +ASG D +++
Sbjct: 1112 LWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKL 1154
Score = 258 (95.9 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 59/156 (37%), Positives = 85/156 (54%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEET 72
H +V LA G++LA+G D ++LW + + GH + SV F +G+E
Sbjct: 791 HSGTVESLAFSP-DGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKEL 849
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
SA S +IKIW+LA +Q+TL+ H S+ SV F P G L S SLDS IK+W+
Sbjct: 850 ASASDDS-TIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATG 908
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ G S + S+ FSPDG+ +ASG E V++
Sbjct: 909 ELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKL 944
Score = 255 (94.8 bits), Expect = 8.5e-20, Sum P(2) = 8.5e-20
Identities = 60/166 (36%), Positives = 80/166 (48%)
Query: 3 AKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVE 62
A E + H SV+ +A Q LA+ D + LW +L GHS V
Sbjct: 1032 ATSELQQSLEDHSRSVHAVAFSPDDKQ-LASSSLDSTIKLWDSATGELQRTLEGHSQGVR 1090
Query: 63 SVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS 122
SV F + L++ G+IK+WN +Q+TL G + SV F P G L SG DS
Sbjct: 1091 SVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDS 1150
Query: 123 FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
IKLWD + T GHS I S+ FSPDG+ +ASG D ++
Sbjct: 1151 TIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKL 1196
Score = 253 (94.1 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 53/156 (33%), Positives = 83/156 (53%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
+H SV +A G++LA+ D + +W SL G S V+SV F +
Sbjct: 874 SHSQSVRSVAFSP-DGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKK 932
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
L++G + ++K+WN A + +TL GH S+ SV F P G L S S D+ IKLW+
Sbjct: 933 LASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTG 992
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
T++GH I ++ FSPDG+ + SG +D +++
Sbjct: 993 ELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKL 1028
Score = 252 (93.8 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 54/163 (33%), Positives = 83/163 (50%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E + F H S+ +A G+ LA+ DD + +W L +L HS V SV
Sbjct: 825 ELLQTFEGHPHSIWSVAFAP-DGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVA 883
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F + L++ +IK+WN A +Q++L G + SV F P G L SGS + +K
Sbjct: 884 FSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVK 943
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
LW+ + T GHS+S+ S+ FSPDG+ +AS D +++
Sbjct: 944 LWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKL 986
Score = 249 (92.7 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 54/163 (33%), Positives = 80/163 (49%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E + H SV +A G+ LA+ D + LW + GH + +V
Sbjct: 951 ELLQTLEGHSQSVRSVAFSP-DGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVA 1009
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F + L +G +IK+W+LA +Q++L H S+ +V F P L S SLDS IK
Sbjct: 1010 FSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIK 1069
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
LWD T GHS+ + S+ FSPDG+ +AS DG +++
Sbjct: 1070 LWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKL 1112
Score = 244 (91.0 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 50/141 (35%), Positives = 76/141 (53%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LA+G + V LW + +L GHS V SV F + L++ +IK+WN
Sbjct: 930 GKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNS 989
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+Q+T GH I +V F P G +L SGS D+ IKLWDL + HS+S+++
Sbjct: 990 TTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHA 1049
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ FSPD + +AS D +++
Sbjct: 1050 VAFSPDDKQLASSSLDSTIKL 1070
Score = 244 (91.0 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 52/141 (36%), Positives = 75/141 (53%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ L +G D V +W + +L GHS VES+ F + L++G +I +W+
Sbjct: 762 GKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDS 821
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
A + +T GH SI SV F P G L S S DS IK+WDL T HS+S+ S
Sbjct: 822 ATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRS 881
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ FSPDG+ +AS D +++
Sbjct: 882 VAFSPDGKLLASSSLDSTIKV 902
Score = 230 (86.0 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 52/155 (33%), Positives = 77/155 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V + G++LA+ D + LW +L+G S V+SV F + L
Sbjct: 1085 HSQGVRSVTFSP-DGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQL 1143
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G +IK+W+ A + +TL GH I SV F P G L SGS D KLWD
Sbjct: 1144 ASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGE 1203
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ + GHSK + S+ FSPDG+ +AS +++
Sbjct: 1204 LLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKL 1238
Score = 223 (83.6 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 45/116 (38%), Positives = 67/116 (57%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+L H PVESV F + L +G ++KIW+ A + +TL+GH ++ S+ F P G
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG 804
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L SGS D+ I LWD + T+ GH SI S+ F+PDG+ +AS +D ++I
Sbjct: 805 KLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKI 860
Score = 195 (73.7 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 44/132 (33%), Positives = 64/132 (48%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LA+G D + LW + +L GHS ++SV F + L++G + K+W+
Sbjct: 1140 GKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDP 1199
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
A + + GH + SV F P G L S S IKLWD + T +S S
Sbjct: 1200 ATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGS 1259
Query: 148 IRFSPDGQWIAS 159
+ FSPDG +AS
Sbjct: 1260 VAFSPDGNRLAS 1271
Score = 156 (60.0 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 31/74 (41%), Positives = 42/74 (56%)
Query: 93 QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152
Q+TL H + SV F P G L SGS D +K+WD + T GHS ++ S+ FSP
Sbjct: 743 QQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSP 802
Query: 153 DGQWIASGGEDGVV 166
DG+ +ASG D +
Sbjct: 803 DGKLLASGSYDNTI 816
Score = 153 (58.9 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 39/117 (33%), Positives = 57/117 (48%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G++LA+G D+ LW + GHS VESV F + L++ +IK+W+
Sbjct: 1182 GKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDP 1241
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF-IKLWDLRRKGCIYTYRGHSK 143
+ +TLN S SV F P G+ L S +D F K+WD + +GHSK
Sbjct: 1242 VTGELLQTLNDPDESAGSVAFSPDGNRLAS--VDIFDTKIWDPATGELLQALKGHSK 1296
Score = 93 (37.8 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 46/167 (27%), Positives = 65/167 (38%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ 355
SSS D T+ WD L T E +S +R +TFS G+ L +G +K+ W P
Sbjct: 1061 SSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKL--WNPLTG 1118
Query: 356 YDAQPM----GWGKVQDLAVTGTQLWFRRVGTWSHQDSGFSTLDSYSAGSPVSTMGRERD 411
Q + W + G QL + DS DS + G + T+ D
Sbjct: 1119 ELQQTLTGRSDWVDSVAFSPDGKQL------ASGYYDSTIKLWDS-ATGELLQTLEGHSD 1171
Query: 412 QIVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNGHDK 458
+I + S P G + SY + EL+ IF GH K
Sbjct: 1172 RIQSVVFS-PDG---KLLASGSYDQTAKLWDPATGELLQ-IFEGHSK 1213
Score = 92 (37.4 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 42/166 (25%), Positives = 70/166 (42%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ 355
S+S D T+ WDL L T + +S ++R + FS G+ L + +KV W PA
Sbjct: 851 SASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKV--WNPATG 908
Query: 356 YDAQPM----GWGKVQDLAVTGTQLWFRRVGTWSHQDSGFSTLDSYSAGSPVSTMGRERD 411
Q + GW K + G +++ + S +++ L + + G + T+
Sbjct: 909 ELQQSLEGRSGWVKSVAFSPDG-----KKLASGSEKNT--VKLWNPATGELLQTLEGHSQ 961
Query: 412 QIVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNGHD 457
+ + S P G +Q S T + + EL T F GHD
Sbjct: 962 SVRSVAFS-PDG---KQLASSSSDTTIKLWNSTTGELQQT-FKGHD 1002
Score = 74 (31.1 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L SSS D T+ W+ L + E S ++ + FS G+ L G +E V W PA
Sbjct: 890 LLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASG-SEKNTVKLWNPA 948
Score = 73 (30.8 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEP 352
L S S D+T WD L+ E +S + + FS G+ LL + G + W+P
Sbjct: 1184 LLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGK-LLASSSYGETIKLWDP 1241
Score = 69 (29.3 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVYGWEPA 353
SSS+D T+ W+ L T + + IR + FS G+ L+ G D +K+ W+ A
Sbjct: 977 SSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKL--WDLA 1032
Score = 64 (27.6 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 18/60 (30%), Positives = 24/60 (40%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L SSS T+ WD L+ T + + FS G L D K+ W+PA
Sbjct: 1226 LLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDTKI--WDPA 1283
Score = 64 (27.6 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353
S S D T+ WDL L + E +S ++ + FS + L + +K+ W+ A
Sbjct: 1019 SGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKL--WDSA 1074
Score = 52 (23.4 bits), Expect = 6.2e-18, Sum P(2) = 6.2e-18
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
L S+S D T+ W+ L T S + + FS G+ L G + +K+ W+
Sbjct: 1100 LLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKL--WDS 1157
Query: 353 A 353
A
Sbjct: 1158 A 1158
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 247 (92.0 bits), Expect = 7.2e-18, P = 7.2e-18
Identities = 51/141 (36%), Positives = 76/141 (53%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
GQ+LA+G +K + LW +L GHS V + F L++G +IK+W+
Sbjct: 167 GQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDP 226
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+++ TL GH + I S+ F P G L SGS D+ IKLWD +T +GHS + S
Sbjct: 227 PSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLS 286
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ FSPD Q + SG D +++
Sbjct: 287 VVFSPDSQLLESGSGDNTIKL 307
Score = 244 (91.0 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 56/156 (35%), Positives = 82/156 (52%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEET 72
H +SV +A +GQ+LA+G D + LW + ++ GHS VESV F NG+
Sbjct: 82 HSSSVQSVAFSP-NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQ-- 138
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+WN A+ +++ T+ GH + SV F P G L SGS + IKLWD
Sbjct: 139 -----------LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATC 187
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
G +T GHS + + FSPDG+ +ASG D +++
Sbjct: 188 GLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKL 223
Score = 218 (81.8 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 47/127 (37%), Positives = 69/127 (54%)
Query: 42 LWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKS 101
LW + ++ GHS V SV F + L++G +IK+W+ A ++ TL GH +
Sbjct: 139 LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSN 198
Query: 102 SITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG 161
+ + F P G L SGS D+ IKLWD +T GHS I S+ FSP+GQ +ASG
Sbjct: 199 WVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGS 258
Query: 162 EDGVVRI 168
D +++
Sbjct: 259 SDATIKL 265
Score = 216 (81.1 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
Identities = 44/107 (41%), Positives = 63/107 (58%)
Query: 51 IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP 110
+ +L GHS +E+V F L++G +IK+W+ A +++TL GH SS+ SV F P
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 111 YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ-W 156
G L SGS D+ IKLW+ +T GHS + S+ FSP+GQ W
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLW 140
Score = 213 (80.0 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 46/141 (32%), Positives = 74/141 (52%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G++LA+G +D + LW +L GHS+ V+SV F + L++G +IK+WN
Sbjct: 53 GRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNS 112
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
A +++ T+ GH + SV F P G +LW+ +T GHS + S
Sbjct: 113 ASDSLKHTMEGHSDRVESVAFSPNG------------QLWNPAIGSLKHTIEGHSDWVLS 160
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ FSPDGQ +ASG + +++
Sbjct: 161 VAFSPDGQLLASGSAEKTIKL 181
Score = 190 (71.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 38/101 (37%), Positives = 57/101 (56%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G++LA+G +D + LW + +L GHS +ES+ F + L++G +IK+W+
Sbjct: 209 GRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDT 268
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
A + + TL GH + SV F P L SGS D+ IKLWD
Sbjct: 269 ATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
Score = 177 (67.4 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P +Q TL GH I +V F P G L SGS D+ IKLWD G T GHS S+ S+
Sbjct: 32 PELQ-TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVA 90
Query: 150 FSPDGQWIASGGEDGVVRI--GASFHLTNT 177
FSP+GQ +ASG D +++ AS L +T
Sbjct: 91 FSPNGQLLASGSSDTTIKLWNSASDSLKHT 120
Score = 88 (36.0 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
L S S D T+ WD SL T E +S+ I L FS G+ L G ++ +K+ W+
Sbjct: 211 LLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKL--WDT 268
Query: 353 A 353
A
Sbjct: 269 A 269
Score = 87 (35.7 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 39/166 (23%), Positives = 70/166 (42%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
L S S+D T+ WD S T + +S + + FS + L G + +K+ W+P
Sbjct: 253 LLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKL--WDP 310
Query: 353 AR---QYDAQPMGWGKVQDLAVTGTQLWFRRVGTWSHQDSGFSTLDSYSAGSPVSTMGRE 409
A ++ + G + + ++ QL +GT+S Q ++ G P + G++
Sbjct: 311 ATGILKHSMRTPGIVRSIEFSIELPQL-ITNLGTFSIQ--------AWHTGYPSRSSGKK 361
Query: 410 RDQIVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNG 455
V N I E ++P YQ S++ +S + NG
Sbjct: 362 TAVSVQRNRWVAIQGQKELWIPPEYQPIS--SAVQDSSIALGCKNG 405
Score = 78 (32.5 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
L S SA++T+ WD L T +S+ + L FS G L G + +K+ W+P
Sbjct: 169 LLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKL--WDP 226
Score = 49 (22.3 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 307 WDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPA 353
W+ SL T E +S + + FS G+ L G E +K+ W+ A
Sbjct: 140 WNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKL--WDSA 185
>UNIPROTKB|H3BT67 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000569627 Bgee:H3BT67 Uniprot:H3BT67
Length = 117
Score = 261 (96.9 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 50/94 (53%), Positives = 71/94 (75%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK 100
EE + AG QSGSI++W+L +TL GH+
Sbjct: 72 NTPEELIVAGSQSGSIRVWDLEAA---KTL-GHQ 101
Score = 106 (42.4 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 23/89 (25%), Positives = 44/89 (49%)
Query: 87 LAVPTVQRT------LNGHKSSITSVDF-HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR 139
+A P V +T + H S+++S+ G L +G D + LW + + CI +
Sbjct: 1 MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT 60
Query: 140 GHSKSINSIRFSPDGQWIASGGEDGVVRI 168
GH+ + S+R + + I +G + G +R+
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRV 89
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 268 (99.4 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 56/139 (40%), Positives = 80/139 (57%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
VLA+G DD+ V LW + +L GHS V SV F L++G ++++W+ A
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPAT 768
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
++Q+TL GH + + SV F P G L SGS D ++LWD T RGHS ++ S+
Sbjct: 769 GSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVA 828
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSPDG+ +ASG D VR+
Sbjct: 829 FSPDGRLLASGSFDKTVRL 847
Score = 209 (78.6 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 45/132 (34%), Positives = 72/132 (54%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G++LA+G DK V LW + +L GHS V SV F L++G ++++W+
Sbjct: 749 GRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDP 808
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
A ++Q+TL GH ++ SV F P G L SGS D ++LWD G + ++
Sbjct: 809 ATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWD-PATGTLQQTLIIKGTVTE 867
Query: 148 IRFSPDGQWIAS 159
++FS DG +I++
Sbjct: 868 LQFSQDGSYIST 879
Score = 123 (48.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 30/75 (40%), Positives = 41/75 (54%)
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153
+TL GH +S+ +V L SGS D ++LWD T GHS + S+ FSPD
Sbjct: 697 QTLEGHSNSVWAV--------LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPD 748
Query: 154 GQWIASGGEDGVVRI 168
G+ +ASG D VR+
Sbjct: 749 GRLLASGSFDKTVRL 763
Score = 96 (38.9 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 36/124 (29%), Positives = 55/124 (44%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S D+TV WD SL T +S T+R + FS G L G + V W+PA
Sbjct: 793 LLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKT-VRLWDPA 851
Query: 354 RQYDAQPMGWGKVQD-LAVTGT--QLWFRRVGTWSHQDSGFSTLDSYSAGSPVSTMGRER 410
G +Q L + GT +L F + G++ + G + S G+ +S+ +
Sbjct: 852 T---------GTLQQTLIIKGTVTELQFSQDGSYISTNLGSLNIQS-RCGNNLSSSPKMH 901
Query: 411 DQIV 414
I+
Sbjct: 902 SDIL 905
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 230 (86.0 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 66/204 (32%), Positives = 98/204 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H A+V ++ S ++LA+ DD+ V +W + +L GHS V SV F + L
Sbjct: 295 HEAAVLSVSYSHDS-RLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLL 353
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++ S ++KIW+ ++Q TL GH+ + SV F L S S DS +K+WD
Sbjct: 354 ASASDS-TVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGS 412
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP 193
+T GH + S+ FS D Q +AS +D V+I T T SL H L
Sbjct: 413 LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD----TGTG------SLQHTL-EG 461
Query: 194 PPQYTSSVPFSHNTSLRKSFTKGR 217
+ SV FSH++ L S + R
Sbjct: 462 HRDWVRSVIFSHDSRLLASASDDR 485
Score = 228 (85.3 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 47/140 (33%), Positives = 72/140 (51%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88
Q+LA+ DD V +W G + +L GH V SV F + + L++ ++KIW+
Sbjct: 392 QLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTG 451
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
++Q TL GH+ + SV F L S S D +++WD + +T GHS + S+
Sbjct: 452 TGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSV 511
Query: 149 RFSPDGQWIASGGEDGVVRI 168
FS D + +AS D VRI
Sbjct: 512 SFSHDSRLLASASNDQTVRI 531
Score = 211 (79.3 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 83/294 (28%), Positives = 128/294 (43%)
Query: 48 SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVD 107
S C+ +L GH V SV + + L++ ++KIW+ ++Q TL GH + SV
Sbjct: 286 SPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVI 345
Query: 108 FHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
F L S S DS +K+WD +T GH + S+ FS D Q +AS +D V+
Sbjct: 346 FSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVK 404
Query: 168 IGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDV 227
I T T SL H L + SV FSH++ L S + + KI
Sbjct: 405 IWD----TGTG------SLQHTL-EGHRDWVRSVIFSHDSQLLASASDD----STVKIWD 449
Query: 228 T---RIEENAESEDQAGEEELFA----TIANPCDYSA--IFQPHRSLNRSGTCVPVSVSR 278
T ++ E +F+ +A+ D I+ + ++ T S
Sbjct: 450 TGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKH-TLEGHSSLV 508
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE 332
TS+S S +L S+S D+TV WD+E SL T + ++ TI + F +
Sbjct: 509 TSVSFSHDSRLLA-----SASNDQTVRIWDIEARSLQHTFDLDA-TIEAMRFDK 556
Score = 210 (79.0 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 45/138 (32%), Positives = 67/138 (48%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
L D V +W G + +L GH V SV F + + L++ ++KIW+
Sbjct: 352 LLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTG 411
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
++Q TL GH+ + SV F L S S DS +K+WD +T GH + S+ F
Sbjct: 412 SLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIF 471
Query: 151 SPDGQWIASGGEDGVVRI 168
S D + +AS +D VRI
Sbjct: 472 SHDSRLLASASDDRTVRI 489
Score = 198 (74.8 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 60/189 (31%), Positives = 85/189 (44%)
Query: 24 GKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIK 83
GK+ + T D N W S C+ +L GH V SV + + L++ ++K
Sbjct: 268 GKEEPNWIETKPD--VANHW----SPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVK 321
Query: 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSK 143
IW+ ++Q TL GH + SV F L S S DS +K+WD +T GH
Sbjct: 322 IWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRD 380
Query: 144 SINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPF 203
+ S+ FS D Q +AS +D V+I T T SL H L + SV F
Sbjct: 381 WVRSVIFSHDSQLLASASDDSTVKIWD----TGTG------SLQHTL-EGHRDWVRSVIF 429
Query: 204 SHNTSLRKS 212
SH++ L S
Sbjct: 430 SHDSQLLAS 438
Score = 175 (66.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 39/130 (30%), Positives = 64/130 (49%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88
Q+LA+ DD V +W G + +L GH V SV F + L++ +++IW+
Sbjct: 434 QLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTE 493
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
+ + TL GH S +TSV F L S S D +++WD+ + +T+ +I ++
Sbjct: 494 KGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHTF-DLDATIEAM 552
Query: 149 RFSP-DGQWI 157
RF WI
Sbjct: 553 RFDKATSLWI 562
Score = 83 (34.3 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
L S+S DRTV WD EK S T E +SS + ++FS LL + V W+
Sbjct: 477 LLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSR-LLASASNDQTVRIWD 533
Score = 67 (28.6 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
L S+S D TV WD SL T E + +R + FS LL ++ V W+
Sbjct: 435 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSR-LLASASDDRTVRIWD 491
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 223 (83.6 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 50/159 (31%), Positives = 77/159 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C +S ++ +G D+ V +W + C+ +L HS PV +V F +
Sbjct: 102 HSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 160
Query: 74 SAGCQSGSIKIWNLAVPTVQRTL-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+ G +IW+ A +TL + ++ V F P G Y+ + +LD+ +KLWD +
Sbjct: 161 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 220
Query: 133 GCIYTYRGHSKSINSI--RFS-PDGQWIASGGEDGVVRI 168
C+ TY GH I FS G+WI SG ED +V I
Sbjct: 221 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 259
Score = 218 (81.8 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 39/142 (27%), Positives = 74/142 (52%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+G+ LA+ DK + +W ++SGH + V + + L + ++KIW+
Sbjct: 30 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 89
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
++ +TL GH + + +F+P + + SGS D +++WD++ C+ T HS ++
Sbjct: 90 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS 149
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
++ F+ DG I S DG+ RI
Sbjct: 150 AVHFNRDGSLIVSSSYDGLCRI 171
Score = 191 (72.3 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 41/166 (24%), Positives = 78/166 (46%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
K EK H ++ +A S +L + DDK + +W + C+ +L GHS V
Sbjct: 52 KFEKT--ISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFC 108
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
F + +G S++IW++ +TL H +++V F+ G + S S D
Sbjct: 109 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 168
Query: 124 IKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++WD C+ T + ++ ++FSP+G++I + D +++
Sbjct: 169 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 214
Score = 182 (69.1 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 40/116 (34%), Positives = 60/116 (51%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+L+GH+ V SV+F E L++ IKIW ++T++GHK I+ V +
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 73
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ L S S D +K+WD+ C+ T +GHS + F+P I SG D VRI
Sbjct: 74 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 129
Score = 139 (54.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 40/166 (24%), Positives = 77/166 (46%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-SGHSTPVESVQFG-NGE 70
AH V+ + + G ++ + D +W C+ +L + PV V+F NG+
Sbjct: 143 AHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 201
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV--DFHPYGD-YLCSGSLDSFIKLW 127
L+A + ++K+W+ + +T GHK+ + +F G ++ SGS D+ + +W
Sbjct: 202 YILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 260
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG--EDGVVRIGAS 171
+L+ K + +GH+ + S P IAS D +++ S
Sbjct: 261 NLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 306
Score = 102 (41.0 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 14/37 (37%), Positives = 29/37 (78%)
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172
+T GH+K+++S++FSP+G+W+AS D +++I ++
Sbjct: 13 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 49
Score = 69 (29.3 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 268 SGTCVPVSVSRTS--LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT--EKNSS 323
SG C+ + + +S + SP +IL +++ D T+ WD K + T KN
Sbjct: 176 SGQCLKTLIDDDNPPVSFVKFSPNGKYIL--AATLDNTLKLWDYSKGKCLKTYTGHKNEK 233
Query: 324 TIRRLTFS-EGGECLLGGDTEGLKVYGW 350
FS GG+ ++ G + L VY W
Sbjct: 234 YCIFANFSVTGGKWIVSGSEDNL-VYIW 260
Score = 66 (28.3 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVYGWEP 352
L S S D +V WD++ + T +S + + F+ G ++ +GL ++ W+
Sbjct: 117 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI--WDT 174
Query: 353 A 353
A
Sbjct: 175 A 175
Score = 37 (18.1 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
S S D V W+L+ +V + ++ +
Sbjct: 250 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 278
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 230 (86.0 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 43/155 (27%), Positives = 79/155 (50%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H +V+ + +G+ LA+ DK + +W ++SGH + V + + L
Sbjct: 71 HTKAVSAVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLL 129
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+G ++K+W L+ +TL GH + + +F+P + + SGS D +++WD+R
Sbjct: 130 VSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 189
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T HS ++++ F+ DG I S DG+ RI
Sbjct: 190 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 224
Score = 223 (83.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 50/159 (31%), Positives = 77/159 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C +S ++ +G D+ V +W + C+ +L HS PV +V F +
Sbjct: 155 HSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 213
Query: 74 SAGCQSGSIKIWNLAVPTVQRTL-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+ G +IW+ A +TL + ++ V F P G Y+ + +LD+ +KLWD +
Sbjct: 214 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 273
Query: 133 GCIYTYRGHSKSINSI--RFS-PDGQWIASGGEDGVVRI 168
C+ TY GH I FS G+WI SG ED +V I
Sbjct: 274 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYI 312
Score = 190 (71.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 42/166 (25%), Positives = 79/166 (47%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
K EK H ++ +A S ++L +G DDK + +W L + +L GHS V
Sbjct: 105 KFEKT--ISGHKLGISDVAWSSDS-RLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFC 161
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
F + +G S++IW++ +TL H +++V F+ G + S S D
Sbjct: 162 CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 221
Query: 124 IKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++WD C+ T + ++ ++FSP+G++I + D +++
Sbjct: 222 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 267
Score = 170 (64.9 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+L+GH+ V +V+F E L++ IKIW ++T++GHK I+ V +
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 126
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L SGS D +K+W+L + T +GHS + F+P I SG D VRI
Sbjct: 127 RLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 182
Score = 137 (53.3 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 39/166 (23%), Positives = 77/166 (46%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-SGHSTPVESVQFG-NGE 70
AH V+ + + G ++ + D +W C+ +L + PV V+F NG+
Sbjct: 196 AHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 254
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV--DFHPYGD-YLCSGSLDSFIKLW 127
L+A + ++K+W+ + +T GHK+ + +F G ++ SGS D+ + +W
Sbjct: 255 YILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIW 313
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG--EDGVVRIGAS 171
+L+ K + +GH+ ++ P IAS D +++ S
Sbjct: 314 NLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKS 359
Score = 130 (50.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
T++ TL GH ++++V F P G++L S S D IK+W T GH I+ + +
Sbjct: 63 TLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 122
Query: 151 SPDGQWIASGGEDGVVRI 168
S D + + SG +D +++
Sbjct: 123 SSDSRLLVSGSDDKTLKV 140
Score = 99 (39.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 13/37 (35%), Positives = 29/37 (78%)
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172
+T GH+K++++++FSP+G+W+AS D +++I ++
Sbjct: 66 FTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAY 102
Score = 67 (28.6 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 24/88 (27%), Positives = 40/88 (45%)
Query: 268 SGTCVPVSVSRTS--LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT--EKNSS 323
SG C+ + + +S + SP +IL +++ D T+ WD K + T KN
Sbjct: 229 SGQCLKTLIDDDNPPVSFVKFSPNGKYIL--AATLDNTLKLWDYSKGKCLKTYTGHKNEK 286
Query: 324 TIRRLTFS-EGGECLLGGDTEGLKVYGW 350
FS GG+ ++ G + + VY W
Sbjct: 287 YCIFANFSVTGGKWIVSGSEDNM-VYIW 313
Score = 65 (27.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVYGWEP 352
L S S D +V WD+ + T +S + + F+ G ++ +GL ++ W+
Sbjct: 170 LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI--WDT 227
Query: 353 A 353
A
Sbjct: 228 A 228
Score = 42 (19.8 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
S S D V W+L+ +V + ++ T+
Sbjct: 303 SGSEDNMVYIWNLQSKEVVQKLQGHTDTV 331
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 218 (81.8 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 39/142 (27%), Positives = 74/142 (52%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+G+ LA+ DK + +W ++SGH + V + + L + ++KIW+
Sbjct: 56 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 115
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
++ +TL GH + + +F+P + + SGS D +++WD++ C+ T HS ++
Sbjct: 116 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS 175
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
++ F+ DG I S DG+ RI
Sbjct: 176 AVHFNRDGSLIVSSSYDGLCRI 197
Score = 214 (80.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 49/159 (30%), Positives = 76/159 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C +S ++ +G D+ V +W + C+ +L HS PV +V F +
Sbjct: 128 HSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 74 SAGCQSGSIKIWNLAVPTVQRTL-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+ G +IW+ A +TL + ++ V F P G Y+ + +LD+ +KLWD +
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 246
Query: 133 GCIYTYRGHSKSINSI--RFS-PDGQWIASGGEDGVVRI 168
C+ TY H I FS G+WI SG ED +V I
Sbjct: 247 KCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285
Score = 191 (72.3 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 41/166 (24%), Positives = 78/166 (46%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
K EK H ++ +A S +L + DDK + +W + C+ +L GHS V
Sbjct: 78 KFEKT--ISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFC 134
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
F + +G S++IW++ +TL H +++V F+ G + S S D
Sbjct: 135 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 194
Query: 124 IKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++WD C+ T + ++ ++FSP+G++I + D +++
Sbjct: 195 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Score = 182 (69.1 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 40/116 (34%), Positives = 60/116 (51%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+L+GH+ V SV+F E L++ IKIW ++T++GHK I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ L S S D +K+WD+ C+ T +GHS + F+P I SG D VRI
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Score = 130 (50.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 39/166 (23%), Positives = 76/166 (45%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-SGHSTPVESVQFG-NGE 70
AH V+ + + G ++ + D +W C+ +L + PV V+F NG+
Sbjct: 169 AHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 227
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV--DFHPYGD-YLCSGSLDSFIKLW 127
L+A + ++K+W+ + +T HK+ + +F G ++ SGS D+ + +W
Sbjct: 228 YILAATLDN-TLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG--EDGVVRIGAS 171
+L+ K + +GH+ + S P IAS D +++ S
Sbjct: 287 NLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 127 (49.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 26/78 (33%), Positives = 41/78 (52%)
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
T++ TL GH +++SV F P G++L S S D IK+W T GH I+ + +
Sbjct: 36 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 151 SPDGQWIASGGEDGVVRI 168
S D + S +D ++I
Sbjct: 96 SSDSNLLVSASDDKTLKI 113
Score = 102 (41.0 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 14/37 (37%), Positives = 29/37 (78%)
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172
+T GH+K+++S++FSP+G+W+AS D +++I ++
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 75
Score = 70 (29.7 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 268 SGTCVPVSVSRTS--LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST--TEKNSS 323
SG C+ + + +S + SP +IL +++ D T+ WD K + T KN
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYIL--AATLDNTLKLWDYSKGKCLKTYTCHKNEK 259
Query: 324 TIRRLTFS-EGGECLLGGDTEGLKVYGW 350
FS GG+ ++ G + L VY W
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNL-VYIW 286
Score = 66 (28.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVYGWEP 352
L S S D +V WD++ + T +S + + F+ G ++ +GL ++ W+
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI--WDT 200
Query: 353 A 353
A
Sbjct: 201 A 201
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 213 (80.0 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 48/140 (34%), Positives = 73/140 (52%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88
Q L +G D + +W L K CI +L GH PV +V ++ L +G +IK+W+L
Sbjct: 513 QYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLN--DKYLFSGSSDKTIKVWDLK 570
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
+ TL H ++ ++ G YL SGS D IK+WDL+ C YT +GH+K + +I
Sbjct: 571 TLECKYTLESHARAVKTLCIS--GQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTI 628
Query: 149 RFSPDGQWIASGGEDGVVRI 168
G + SG D +R+
Sbjct: 629 CIL--GTNLYSGSYDKTIRV 646
Score = 204 (76.9 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 46/141 (32%), Positives = 75/141 (53%)
Query: 30 VLATGGDDKKVNLWALGKSN--CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
+L TG D + ++ N C+ +L GH PVES+ + ++ L +G SIK+W+L
Sbjct: 472 LLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYN--DQYLFSGSSDHSIKVWDL 529
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
TL GH + +V + YL SGS D IK+WDL+ C YT H++++ +
Sbjct: 530 KKLRCIFTLEGHDKPVHTVLLND--KYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKT 587
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ S GQ++ SG D +++
Sbjct: 588 LCIS--GQYLFSGSNDKTIKV 606
Score = 162 (62.1 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 43/156 (27%), Positives = 71/156 (45%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
+H +V L + SGQ L +G +DK + +W L C +L GH+ V ++
Sbjct: 580 SHARAVKTLCI---SGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILG--TN 634
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
L +G +I++WNL TL GH + + L + S D+ IK+WDL
Sbjct: 635 LYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVI--CDKLLFTASDDNTIKIWDLETL 692
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C T GH+ ++ + D + + S D +R+
Sbjct: 693 RCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRV 728
Score = 156 (60.0 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 30/101 (29%), Positives = 58/101 (57%)
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQ--RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ L GC SI++++ ++ +TL GH+ + S+ ++ YL SGS D IK+W
Sbjct: 470 DNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYND--QYLFSGSSDHSIKVW 527
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
DL++ CI+T GH K ++++ + +++ SG D +++
Sbjct: 528 DLKKLRCIFTLEGHDKPVHTVLLND--KYLFSGSSDKTIKV 566
Score = 95 (38.5 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 289 MLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKV 347
++C L ++S D T+ WDLE +T E +++T++ L E +C++ + ++V
Sbjct: 669 VICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRV 728
Query: 348 YGW 350
+GW
Sbjct: 729 WGW 731
Score = 77 (32.2 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPAR- 354
S S+D+T+ WDL+ T E ++ ++ L S G+ L G + +KV+ + R
Sbjct: 557 SGSSDKTIKVWDLKTLECKYTLESHARAVKTLCIS--GQYLFSGSNDKTIKVWDLKTFRC 614
Query: 355 QYDAQPMGWGK-VQDLAVTGTQLW 377
Y + G K V + + GT L+
Sbjct: 615 NYTLK--GHTKWVTTICILGTNLY 636
Score = 49 (22.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 13/67 (19%), Positives = 27/67 (40%)
Query: 290 LCFILTT--SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKV 347
+C + T S S D+T+ W+L+ +T + + + + D +K+
Sbjct: 628 ICILGTNLYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDK-LLFTASDDNTIKI 686
Query: 348 YGWEPAR 354
+ E R
Sbjct: 687 WDLETLR 693
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 223 (83.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 50/159 (31%), Positives = 77/159 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C +S ++ +G D+ V +W + C+ +L HS PV +V F +
Sbjct: 128 HSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 74 SAGCQSGSIKIWNLAVPTVQRTL-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+ G +IW+ A +TL + ++ V F P G Y+ + +LD+ +KLWD +
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 246
Query: 133 GCIYTYRGHSKSINSI--RFS-PDGQWIASGGEDGVVRI 168
C+ TY GH I FS G+WI SG ED +V I
Sbjct: 247 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285
Score = 218 (81.8 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 39/142 (27%), Positives = 74/142 (52%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+G+ LA+ DK + +W ++SGH + V + + L + ++KIW+
Sbjct: 56 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 115
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
++ +TL GH + + +F+P + + SGS D +++WD++ C+ T HS ++
Sbjct: 116 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS 175
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
++ F+ DG I S DG+ RI
Sbjct: 176 AVHFNRDGSLIVSSSYDGLCRI 197
Score = 191 (72.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 41/166 (24%), Positives = 78/166 (46%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
K EK H ++ +A S +L + DDK + +W + C+ +L GHS V
Sbjct: 78 KFEKT--ISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFC 134
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
F + +G S++IW++ +TL H +++V F+ G + S S D
Sbjct: 135 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 194
Query: 124 IKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++WD C+ T + ++ ++FSP+G++I + D +++
Sbjct: 195 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Score = 182 (69.1 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 40/116 (34%), Positives = 60/116 (51%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+L+GH+ V SV+F E L++ IKIW ++T++GHK I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ L S S D +K+WD+ C+ T +GHS + F+P I SG D VRI
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Score = 139 (54.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 40/166 (24%), Positives = 77/166 (46%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-SGHSTPVESVQFG-NGE 70
AH V+ + + G ++ + D +W C+ +L + PV V+F NG+
Sbjct: 169 AHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 227
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV--DFHPYGD-YLCSGSLDSFIKLW 127
L+A + ++K+W+ + +T GHK+ + +F G ++ SGS D+ + +W
Sbjct: 228 YILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG--EDGVVRIGAS 171
+L+ K + +GH+ + S P IAS D +++ S
Sbjct: 287 NLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 102 (41.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/37 (37%), Positives = 29/37 (78%)
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172
+T GH+K+++S++FSP+G+W+AS D +++I ++
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 75
Score = 69 (29.3 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 268 SGTCVPVSVSRTS--LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT--EKNSS 323
SG C+ + + +S + SP +IL +++ D T+ WD K + T KN
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYIL--AATLDNTLKLWDYSKGKCLKTYTGHKNEK 259
Query: 324 TIRRLTFS-EGGECLLGGDTEGLKVYGW 350
FS GG+ ++ G + L VY W
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNL-VYIW 286
Score = 66 (28.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVYGWEP 352
L S S D +V WD++ + T +S + + F+ G ++ +GL ++ W+
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI--WDT 200
Query: 353 A 353
A
Sbjct: 201 A 201
Score = 37 (18.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
S S D V W+L+ +V + ++ +
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 223 (83.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 50/159 (31%), Positives = 77/159 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C +S ++ +G D+ V +W + C+ +L HS PV +V F +
Sbjct: 128 HSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 74 SAGCQSGSIKIWNLAVPTVQRTL-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+ G +IW+ A +TL + ++ V F P G Y+ + +LD+ +KLWD +
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 246
Query: 133 GCIYTYRGHSKSINSI--RFS-PDGQWIASGGEDGVVRI 168
C+ TY GH I FS G+WI SG ED +V I
Sbjct: 247 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285
Score = 218 (81.8 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 39/142 (27%), Positives = 74/142 (52%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+G+ LA+ DK + +W ++SGH + V + + L + ++KIW+
Sbjct: 56 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 115
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
++ +TL GH + + +F+P + + SGS D +++WD++ C+ T HS ++
Sbjct: 116 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS 175
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
++ F+ DG I S DG+ RI
Sbjct: 176 AVHFNRDGSLIVSSSYDGLCRI 197
Score = 191 (72.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 41/166 (24%), Positives = 78/166 (46%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
K EK H ++ +A S +L + DDK + +W + C+ +L GHS V
Sbjct: 78 KFEKT--ISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFC 134
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
F + +G S++IW++ +TL H +++V F+ G + S S D
Sbjct: 135 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 194
Query: 124 IKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++WD C+ T + ++ ++FSP+G++I + D +++
Sbjct: 195 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Score = 182 (69.1 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 40/116 (34%), Positives = 60/116 (51%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+L+GH+ V SV+F E L++ IKIW ++T++GHK I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ L S S D +K+WD+ C+ T +GHS + F+P I SG D VRI
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Score = 139 (54.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 40/166 (24%), Positives = 77/166 (46%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-SGHSTPVESVQFG-NGE 70
AH V+ + + G ++ + D +W C+ +L + PV V+F NG+
Sbjct: 169 AHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 227
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV--DFHPYGD-YLCSGSLDSFIKLW 127
L+A + ++K+W+ + +T GHK+ + +F G ++ SGS D+ + +W
Sbjct: 228 YILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG--EDGVVRIGAS 171
+L+ K + +GH+ + S P IAS D +++ S
Sbjct: 287 NLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 102 (41.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/37 (37%), Positives = 29/37 (78%)
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172
+T GH+K+++S++FSP+G+W+AS D +++I ++
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 75
Score = 69 (29.3 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 268 SGTCVPVSVSRTS--LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT--EKNSS 323
SG C+ + + +S + SP +IL +++ D T+ WD K + T KN
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYIL--AATLDNTLKLWDYSKGKCLKTYTGHKNEK 259
Query: 324 TIRRLTFS-EGGECLLGGDTEGLKVYGW 350
FS GG+ ++ G + L VY W
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNL-VYIW 286
Score = 66 (28.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVYGWEP 352
L S S D +V WD++ + T +S + + F+ G ++ +GL ++ W+
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI--WDT 200
Query: 353 A 353
A
Sbjct: 201 A 201
Score = 37 (18.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
S S D V W+L+ +V + ++ +
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 223 (83.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 50/159 (31%), Positives = 77/159 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C +S ++ +G D+ V +W + C+ +L HS PV +V F +
Sbjct: 128 HSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 74 SAGCQSGSIKIWNLAVPTVQRTL-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+ G +IW+ A +TL + ++ V F P G Y+ + +LD+ +KLWD +
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 246
Query: 133 GCIYTYRGHSKSINSI--RFS-PDGQWIASGGEDGVVRI 168
C+ TY GH I FS G+WI SG ED +V I
Sbjct: 247 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285
Score = 218 (81.8 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 39/142 (27%), Positives = 74/142 (52%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+G+ LA+ DK + +W ++SGH + V + + L + ++KIW+
Sbjct: 56 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 115
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
++ +TL GH + + +F+P + + SGS D +++WD++ C+ T HS ++
Sbjct: 116 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS 175
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
++ F+ DG I S DG+ RI
Sbjct: 176 AVHFNRDGSLIVSSSYDGLCRI 197
Score = 191 (72.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 41/166 (24%), Positives = 78/166 (46%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
K EK H ++ +A S +L + DDK + +W + C+ +L GHS V
Sbjct: 78 KFEKT--ISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFC 134
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
F + +G S++IW++ +TL H +++V F+ G + S S D
Sbjct: 135 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 194
Query: 124 IKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++WD C+ T + ++ ++FSP+G++I + D +++
Sbjct: 195 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Score = 182 (69.1 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 40/116 (34%), Positives = 60/116 (51%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+L+GH+ V SV+F E L++ IKIW ++T++GHK I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ L S S D +K+WD+ C+ T +GHS + F+P I SG D VRI
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Score = 139 (54.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 40/166 (24%), Positives = 77/166 (46%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-SGHSTPVESVQFG-NGE 70
AH V+ + + G ++ + D +W C+ +L + PV V+F NG+
Sbjct: 169 AHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 227
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV--DFHPYGD-YLCSGSLDSFIKLW 127
L+A + ++K+W+ + +T GHK+ + +F G ++ SGS D+ + +W
Sbjct: 228 YILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG--EDGVVRIGAS 171
+L+ K + +GH+ + S P IAS D +++ S
Sbjct: 287 NLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 102 (41.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/37 (37%), Positives = 29/37 (78%)
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172
+T GH+K+++S++FSP+G+W+AS D +++I ++
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 75
Score = 69 (29.3 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 268 SGTCVPVSVSRTS--LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT--EKNSS 323
SG C+ + + +S + SP +IL +++ D T+ WD K + T KN
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYIL--AATLDNTLKLWDYSKGKCLKTYTGHKNEK 259
Query: 324 TIRRLTFS-EGGECLLGGDTEGLKVYGW 350
FS GG+ ++ G + L VY W
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNL-VYIW 286
Score = 66 (28.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVYGWEP 352
L S S D +V WD++ + T +S + + F+ G ++ +GL ++ W+
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI--WDT 200
Query: 353 A 353
A
Sbjct: 201 A 201
Score = 37 (18.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
S S D V W+L+ +V + ++ +
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 223 (83.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 50/159 (31%), Positives = 77/159 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C +S ++ +G D+ V +W + C+ +L HS PV +V F +
Sbjct: 128 HSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 74 SAGCQSGSIKIWNLAVPTVQRTL-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+ G +IW+ A +TL + ++ V F P G Y+ + +LD+ +KLWD +
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 246
Query: 133 GCIYTYRGHSKSINSI--RFS-PDGQWIASGGEDGVVRI 168
C+ TY GH I FS G+WI SG ED +V I
Sbjct: 247 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285
Score = 218 (81.8 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 39/142 (27%), Positives = 74/142 (52%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+G+ LA+ DK + +W ++SGH + V + + L + ++KIW+
Sbjct: 56 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 115
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
++ +TL GH + + +F+P + + SGS D +++WD++ C+ T HS ++
Sbjct: 116 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS 175
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
++ F+ DG I S DG+ RI
Sbjct: 176 AVHFNRDGSLIVSSSYDGLCRI 197
Score = 191 (72.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 41/166 (24%), Positives = 78/166 (46%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
K EK H ++ +A S +L + DDK + +W + C+ +L GHS V
Sbjct: 78 KFEKT--ISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFC 134
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
F + +G S++IW++ +TL H +++V F+ G + S S D
Sbjct: 135 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 194
Query: 124 IKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++WD C+ T + ++ ++FSP+G++I + D +++
Sbjct: 195 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Score = 182 (69.1 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 40/116 (34%), Positives = 60/116 (51%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+L+GH+ V SV+F E L++ IKIW ++T++GHK I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ L S S D +K+WD+ C+ T +GHS + F+P I SG D VRI
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Score = 139 (54.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 40/166 (24%), Positives = 77/166 (46%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-SGHSTPVESVQFG-NGE 70
AH V+ + + G ++ + D +W C+ +L + PV V+F NG+
Sbjct: 169 AHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 227
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV--DFHPYGD-YLCSGSLDSFIKLW 127
L+A + ++K+W+ + +T GHK+ + +F G ++ SGS D+ + +W
Sbjct: 228 YILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG--EDGVVRIGAS 171
+L+ K + +GH+ + S P IAS D +++ S
Sbjct: 287 NLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 102 (41.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/37 (37%), Positives = 29/37 (78%)
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172
+T GH+K+++S++FSP+G+W+AS D +++I ++
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 75
Score = 69 (29.3 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 268 SGTCVPVSVSRTS--LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT--EKNSS 323
SG C+ + + +S + SP +IL +++ D T+ WD K + T KN
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYIL--AATLDNTLKLWDYSKGKCLKTYTGHKNEK 259
Query: 324 TIRRLTFS-EGGECLLGGDTEGLKVYGW 350
FS GG+ ++ G + L VY W
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNL-VYIW 286
Score = 66 (28.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVYGWEP 352
L S S D +V WD++ + T +S + + F+ G ++ +GL ++ W+
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI--WDT 200
Query: 353 A 353
A
Sbjct: 201 A 201
Score = 37 (18.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
S S D V W+L+ +V + ++ +
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 223 (83.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 50/159 (31%), Positives = 77/159 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C +S ++ +G D+ V +W + C+ +L HS PV +V F +
Sbjct: 128 HSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 74 SAGCQSGSIKIWNLAVPTVQRTL-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+ G +IW+ A +TL + ++ V F P G Y+ + +LD+ +KLWD +
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 246
Query: 133 GCIYTYRGHSKSINSI--RFS-PDGQWIASGGEDGVVRI 168
C+ TY GH I FS G+WI SG ED +V I
Sbjct: 247 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285
Score = 218 (81.8 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 39/142 (27%), Positives = 74/142 (52%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+G+ LA+ DK + +W ++SGH + V + + L + ++KIW+
Sbjct: 56 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 115
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
++ +TL GH + + +F+P + + SGS D +++WD++ C+ T HS ++
Sbjct: 116 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS 175
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
++ F+ DG I S DG+ RI
Sbjct: 176 AVHFNRDGSLIVSSSYDGLCRI 197
Score = 191 (72.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 41/166 (24%), Positives = 78/166 (46%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
K EK H ++ +A S +L + DDK + +W + C+ +L GHS V
Sbjct: 78 KFEKT--ISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFC 134
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
F + +G S++IW++ +TL H +++V F+ G + S S D
Sbjct: 135 CNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 194
Query: 124 IKLWDLRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++WD C+ T + ++ ++FSP+G++I + D +++
Sbjct: 195 CRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Score = 182 (69.1 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 40/116 (34%), Positives = 60/116 (51%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+L+GH+ V SV+F E L++ IKIW ++T++GHK I+ V +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ L S S D +K+WD+ C+ T +GHS + F+P I SG D VRI
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Score = 139 (54.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 40/166 (24%), Positives = 77/166 (46%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-SGHSTPVESVQFG-NGE 70
AH V+ + + G ++ + D +W C+ +L + PV V+F NG+
Sbjct: 169 AHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 227
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV--DFHPYGD-YLCSGSLDSFIKLW 127
L+A + ++K+W+ + +T GHK+ + +F G ++ SGS D+ + +W
Sbjct: 228 YILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 286
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG--EDGVVRIGAS 171
+L+ K + +GH+ + S P IAS D +++ S
Sbjct: 287 NLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332
Score = 102 (41.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/37 (37%), Positives = 29/37 (78%)
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172
+T GH+K+++S++FSP+G+W+AS D +++I ++
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 75
Score = 69 (29.3 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 268 SGTCVPVSVSRTS--LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTT--EKNSS 323
SG C+ + + +S + SP +IL +++ D T+ WD K + T KN
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYIL--AATLDNTLKLWDYSKGKCLKTYTGHKNEK 259
Query: 324 TIRRLTFS-EGGECLLGGDTEGLKVYGW 350
FS GG+ ++ G + L VY W
Sbjct: 260 YCIFANFSVTGGKWIVSGSEDNL-VYIW 286
Score = 66 (28.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVYGWEP 352
L S S D +V WD++ + T +S + + F+ G ++ +GL ++ W+
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI--WDT 200
Query: 353 A 353
A
Sbjct: 201 A 201
Score = 37 (18.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
S S D V W+L+ +V + ++ +
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 254 (94.5 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 55/168 (32%), Positives = 85/168 (50%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVES 63
+EK F AH + C+A+ VL T DD + LW K C GH+ V
Sbjct: 89 LEKVHSFEAHSDYLRCIAVHPTQPLVL-TSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQ 147
Query: 64 VQFG-NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSL 120
+ F T ++ ++K+W L TL GH+ + VD++ GD YL SG+
Sbjct: 148 IVFNPKDNNTFASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGAD 207
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
D +K+WD + K C+ T GH+++I+++ F P+ + +G EDG VRI
Sbjct: 208 DRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPELPIVLTGSEDGTVRI 255
Score = 163 (62.4 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 46/168 (27%), Positives = 82/168 (48%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H V + K A+ D+ V +W LG + +L GH V V + +G
Sbjct: 138 FEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGG 197
Query: 71 ET--LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
+ L +G +KIW+ T +TL GH +I++V FHP + +GS D +++W
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPELPIVLTGSEDGTVRIWH 257
Query: 129 ---LRRKGCIYTYRGHSK--SINSIRFSPDGQWIASGGEDG--VVRIG 169
R + C+ Y G + +I+S+R + + +A G ++G ++++G
Sbjct: 258 SGTYRLETCL-NY-GFERVWTISSMRGTNN---VALGYDEGSIIIKVG 300
Score = 146 (56.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 39/167 (23%), Positives = 69/167 (41%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
+ +DF V + +L TG DD ++ ++ + S HS + +
Sbjct: 48 QMVKDFEVCDVPVRSARFVARKNWIL-TGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIA 106
Query: 66 FGNGEETLSAGCQSGSIKIWNLA-VPTVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSF 123
+ + IK+WN + QR GH + + F+P + S SLD
Sbjct: 107 VHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRT 166
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ--WIASGGEDGVVRI 168
+K+W L +T GH K +N + + G ++ SG +D +V+I
Sbjct: 167 VKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKI 213
Score = 59 (25.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
S + DR V WD + + V T E ++ I + F +L G +G
Sbjct: 204 SGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPELPIVLTGSEDG 251
>UNIPROTKB|J9P0X5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR026962
GO:GO:0051013 GeneTree:ENSGT00700000104017 GO:GO:0008352
PANTHER:PTHR19845 EMBL:AAEX03001165 Ensembl:ENSCAFT00000044294
OMA:INSKYET Uniprot:J9P0X5
Length = 168
Score = 167 (63.8 bits), Expect = 8.2e-18, Sum P(2) = 8.2e-18
Identities = 32/64 (50%), Positives = 47/64 (73%)
Query: 782 NVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVDI 841
++W L+LC+ +LP I+ LLQSKYE Y+ T C +L LIL+ F P+I + + + S+GVDI
Sbjct: 62 SLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILA-AAPSVGVDI 120
Query: 842 SKEE 845
S+EE
Sbjct: 121 SREE 124
Score = 87 (35.7 bits), Expect = 8.2e-18, Sum P(2) = 8.2e-18
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 449 MSTIFNGHDKMMAVLRNRQRSLGLVYMAVNNKNMEAGIDTALSMNDGTVMIDL 501
MS GHD M VL +R ++L V +++ +D+A+++ND +V++DL
Sbjct: 1 MSQTRKGHDTMCVVLTSRHKNLDTVRALWTTGDIKTSVDSAVAINDLSVVVDL 53
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 234 (87.4 bits), Expect = 9.3e-18, Sum P(2) = 9.3e-18
Identities = 44/155 (28%), Positives = 80/155 (51%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H A+++ + +G+ LA+ D + +W NC +L GHS + V + + L
Sbjct: 38 HSAAISSVKFSP-NGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRL 96
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ ++K+W++ +TL GH + DF+P + + SGS D +K+W+++
Sbjct: 97 VSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGK 156
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T HS I+++ F+ +G I SG DG+ RI
Sbjct: 157 CLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRI 191
Score = 229 (85.7 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 51/159 (32%), Positives = 78/159 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C S ++ +G D+ V +W + C+ +LS HS P+ +V F +
Sbjct: 122 HSDFVFCCDFNPPSN-LIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLI 180
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSS-ITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+G G +IW+ A RTL + ++ V F P G Y+ + +LD+ +KLWD R
Sbjct: 181 VSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRG 240
Query: 133 GCIYTYRGHSKSINSI--RFSPDGQ-WIASGGEDGVVRI 168
C+ TY GH + FS G+ W+ SG ED +V I
Sbjct: 241 RCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYI 279
Score = 203 (76.5 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 41/156 (26%), Positives = 76/156 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++ +A S + L + DDK + +W + C+ +L GHS V F +
Sbjct: 80 HSLEISDVAWSSDSSR-LVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLI 138
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+G S+KIW + +TL+ H I++V+F+ G + SGS D ++WD
Sbjct: 139 VSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQ 198
Query: 134 CIYTYRGHSKS-INSIRFSPDGQWIASGGEDGVVRI 168
C+ T ++ ++FSP+G++I + D +++
Sbjct: 199 CLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKL 234
Score = 173 (66.0 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 39/117 (33%), Positives = 58/117 (49%)
Query: 52 MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPY 111
++L+GHS + SV+F E L++ I IW ++TL GH I+ V +
Sbjct: 33 LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSD 92
Query: 112 GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D +K+WD+R C+ T +GHS + F+P I SG D V+I
Sbjct: 93 SSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKI 149
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 38/152 (25%), Positives = 72/152 (47%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP-VESVQFG-NGEETLSAGCQSGSIKI 84
+G ++ +G D +W C+ +L+ P V V+F NG+ L+A + ++K+
Sbjct: 176 NGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDN-TLKL 234
Query: 85 WNLAVPTVQRTLNGHKSS--ITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYRGH 141
W+ + +T GHK+ F G ++ SGS D+ + +W+L+ K + +GH
Sbjct: 235 WDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGH 294
Query: 142 SKSINSIRFSPDGQWIASGG--EDGVVRIGAS 171
+ + S P IAS D +++ +S
Sbjct: 295 TDVVISAACHPTKNIIASAALENDKTIKVWSS 326
Score = 69 (29.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVYGWEP 352
L S S D +V W+++ + T +S I + F+ G ++ G +GL ++ W+
Sbjct: 137 LIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRI--WDA 194
Query: 353 A 353
A
Sbjct: 195 A 195
Score = 37 (18.1 bits), Expect = 9.3e-18, Sum P(2) = 9.3e-18
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
S S D V W+L+ +V + ++ +
Sbjct: 270 SGSEDNMVYIWNLQTKEIVQRLQGHTDVV 298
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 219 (82.2 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 40/141 (28%), Positives = 68/141 (48%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LA+ DK + +W +L GH + + + + + + +IKIW++
Sbjct: 58 GKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDV 117
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+ +TL GHK + V F+P + + SGS D +++WD+ C HS +
Sbjct: 118 ESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTG 177
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ F+ DG + SG DG VRI
Sbjct: 178 VHFNRDGTLVVSGSYDGTVRI 198
Score = 187 (70.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 36/156 (23%), Positives = 77/156 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++ +A + S +++ + DDK + +W + + +L GH V V F +
Sbjct: 87 HKEGISDIAWSQDS-KLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLI 145
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+G +++IW++ + ++ H +T V F+ G + SGS D +++WD
Sbjct: 146 VSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQ 205
Query: 134 CIYTYRGHS-KSINSIRFSPDGQWIASGGEDGVVRI 168
+ T K ++ ++FSP+G+++ +G D +R+
Sbjct: 206 LLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRL 241
Score = 180 (68.4 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 38/116 (32%), Positives = 58/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+L GH + SV+F + L++ +IKIW +RTL GHK I+ + +
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS 100
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+CS S D IK+WD+ + T +GH + + + F+P I SG D VRI
Sbjct: 101 KLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRI 156
Score = 113 (44.8 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172
YT +GH KSI+S++FSPDG+W+AS D ++I ++
Sbjct: 40 YTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAY 76
Score = 68 (29.0 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 13/56 (23%), Positives = 30/56 (53%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGD-TEGLKVY 348
L S+S D+T+ WD+E +V T + + + ++F+ ++ G E ++++
Sbjct: 102 LICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIW 157
Score = 63 (27.2 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVST-TEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
L S S D TV WD L++T + ++ + + FS G+ +L G + L+++ +
Sbjct: 186 LVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSY 244
Score = 57 (25.1 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 14/58 (24%), Positives = 23/58 (39%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
L S S D V WD+ +S + + F+ G ++ G +G V W+
Sbjct: 144 LIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGT-VRIWD 200
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 210 (79.0 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLA 88
V+ + +D + +W + +L GH+ V+ + F + + L A C + +IK+W+
Sbjct: 57 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQ 115
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
RT++GH +++SV P GD++ S S D IK+W+++ C+ T+ GH + + +
Sbjct: 116 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 175
Query: 149 RFSPDGQWIASGGEDGVVRI 168
R + DG IAS D VR+
Sbjct: 176 RPNQDGTLIASCSNDQTVRV 195
Score = 196 (74.1 bits), Expect = 6.5e-16, Sum P(2) = 6.5e-16
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+LSGH +PV V F + + + +IK+W+ +RTL GH S+ + F G
Sbjct: 38 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 97
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD + CI T GH +++S+ P+G I S D +++
Sbjct: 98 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKM 153
Score = 190 (71.9 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 33/105 (31%), Positives = 58/105 (55%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K G L +G DK + +W + C+M+L GH V V F +G + + + ++++W
Sbjct: 241 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 300
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ +TLN H+ +TS+DFH Y+ +GS+D +K+W+ R
Sbjct: 301 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 154 (59.3 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEET 72
H SV ++ SG++LA+ D + LW CI ++ GH V SV NG+
Sbjct: 84 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 142
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+SA + +IK+W + +T GH+ + V + G + S S D +++W + K
Sbjct: 143 VSAS-RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 201
Query: 133 GCIYTYRGHSKSINSIRFSPDGQW 156
C R H + I ++P+ +
Sbjct: 202 ECKAELREHEHVVECISWAPESSY 225
Score = 146 (56.5 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
WA S S+S +T E+ + G L +G + +IK+W+++ TL GH +
Sbjct: 219 WAPESS--YSSIS-EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 275
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
+ V FH G ++ S + D +++WD + K C+ T H + S+ F ++ +G
Sbjct: 276 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 335
Query: 163 DGVVRI 168
D V++
Sbjct: 336 DQTVKV 341
Score = 137 (53.3 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 70 EETLSAGC--QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
EE S G Q K W + P + L+GH+S +T V FHP + S S D+ IK+W
Sbjct: 12 EEFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW 70
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
D T +GH+ S+ I F G+ +AS D +++
Sbjct: 71 DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 111
Score = 75 (31.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGW 350
F+L S S D+T+ WD+ + T + + +R + F GG+ +L D + L+V+ +
Sbjct: 245 FLL--SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 351 EPAR 354
+ R
Sbjct: 303 KNKR 306
Score = 65 (27.9 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S SAD T+ WD + F + T + + + G+ ++ + + WE
Sbjct: 99 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMWEVQ 157
Query: 354 RQY 356
Y
Sbjct: 158 TGY 160
Score = 49 (22.3 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
FIL S + D+T+ WD + + T + + L F + ++ G + +KV W
Sbjct: 287 FIL--SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--W 342
Query: 351 E 351
E
Sbjct: 343 E 343
Score = 48 (22.0 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334
+S++I+P + S+S D+T+ W+++ V T + +R + ++ G
Sbjct: 131 SSVAIMPNGDHI-----VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 181
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 238 (88.8 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 62/197 (31%), Positives = 90/197 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C A G+++A+ GDD+ V LW CI + + V F + +
Sbjct: 143 HTNWVRC-ARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCI 201
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++ +IKIW++ + + H + + FHP G+YL SGS DS IK+ DL
Sbjct: 202 ASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGR 261
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN-TSIHVVDLSLVHPLGT 192
IYT GH + ++ FS DG ASGG D V + TN S++ +L H
Sbjct: 262 LIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWK----TNFDSLNYRELLSKHSKRV 317
Query: 193 ---PPPQYTSSVPFSHN 206
PPP P SH+
Sbjct: 318 TPDPPPHLMDIYPRSHH 334
Score = 224 (83.9 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 48/159 (30%), Positives = 78/159 (49%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F AH ASV + + GQ L T DDK V +W + + + SL+ H+ V +F + +
Sbjct: 98 FKAHTASVRSVHFSR-DGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARF-SPD 155
Query: 71 ETLSAGC-QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
L A C ++++W+ + + S T VDF+ G + S D+ IK+WD+
Sbjct: 156 GRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDI 215
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
R I Y+ H+ +N F P G ++ SG D ++I
Sbjct: 216 RTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKI 254
Score = 214 (80.4 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 45/158 (28%), Positives = 75/158 (47%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H ++C + Q LATG DK + +W L GH+ + V F
Sbjct: 14 FKGHKDVISCADFNPNNKQ-LATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSG 72
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+++ + ++++W ++ H +S+ SV F G L + S D +K+W +
Sbjct: 73 SLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVE 132
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
RK +Y+ H+ + RFSPDG+ IAS G+D VR+
Sbjct: 133 RKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRL 170
Score = 165 (63.1 bits), Expect = 6.2e-11, Sum P(3) = 6.2e-11
Identities = 38/142 (26%), Positives = 59/142 (41%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
SG ++A+ D+ V LW H+ V SV F + L S+K+W
Sbjct: 71 SGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWG 130
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ +LN H + + F P G + S D ++LWD CI + + S
Sbjct: 131 VERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSAT 190
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
+ F+ G IAS G D ++I
Sbjct: 191 FVDFNSSGTCIASSGADNTIKI 212
Score = 165 (63.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 65/267 (24%), Positives = 108/267 (40%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
PT++R GHK I+ DF+P L +GS D + +W+L K + + GH+ I +
Sbjct: 8 PTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVN 67
Query: 150 FSPDGQWIASGGEDGVVRIGA-SFHLTNT--SIHVVDLSLVHPLGTPPPQYTSSVPFSHN 206
F+P G +AS D VR+ S +T H + VH T+S S
Sbjct: 68 FAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVK 127
Query: 207 T--SLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEE---LFATIANPCDYSAIFQP 261
RK F T + R + G++ L+ T ++ C IF
Sbjct: 128 VWGVERKKFLYSLNRHTNW-VRCARFSPDGRLIASCGDDRTVRLWDTSSHQC--INIFTD 184
Query: 262 HRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN 321
+ S T V + S T ++ SS AD T+ WD+ L+ + +
Sbjct: 185 YGG---SATFVDFNSSGTCIA--------------SSGADNTIKIWDIRTNKLIQHYKVH 227
Query: 322 SSTIRRLTFSEGGECLLGGDTEG-LKV 347
++ + +F G L+ G ++ +K+
Sbjct: 228 NAGVNCFSFHPSGNYLISGSSDSTIKI 254
Score = 150 (57.9 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 64/258 (24%), Positives = 95/258 (36%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F +G S + SG +A+ G D + +W + + I H+ V F
Sbjct: 182 FTDYGGSATFVDFNS-SGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSG 240
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L +G +IKI +L + TL+GHK + +V F GD SG DS + +W
Sbjct: 241 NYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTN 300
Query: 131 RKGCIYT--YRGHSKSINS------IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVV 182
Y HSK + + P ++G V I +T VV
Sbjct: 301 FDSLNYRELLSKHSKRVTPDPPPHLMDIYPRSHH-RHHPQNGTVEINPVADTQSTDPQVV 359
Query: 183 DLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGE 242
++ V T Y + +S R FT G G R A E+ +
Sbjct: 360 EVGRVVFSTTDARNYDGA------SSSRAQFTSGMDSGP------FRTHTQAREEEDENQ 407
Query: 243 EELFA--TIANPCDYSAI 258
EE FA A+P + S I
Sbjct: 408 EERFAGGMTASPAERSGI 425
Score = 63 (27.2 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S S+D T+ DL + L+ T + + +TFS G+ G + +V W+
Sbjct: 245 SGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADS-QVLMWK 298
Score = 47 (21.6 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 22/68 (32%), Positives = 30/68 (44%)
Query: 552 TEGSLTAKFLSSRNLREKEDRIGESQPFRGRTLSVQDKIYFGFDFRSG--QSLSSTFFEN 609
T G + F + RE+ED E + G T S + RSG SL+ST EN
Sbjct: 385 TSGMDSGPFRTHTQAREEEDENQEERFAGGMTASPAE--------RSGIPSSLTSTL-EN 435
Query: 610 FALNIDIV 617
+DI+
Sbjct: 436 IVQQLDIL 443
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 225 (84.3 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 44/141 (31%), Positives = 74/141 (52%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LA+G D +N++ + + +L GH+ P+ S+ F + L G IKI+++
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+ TL+GH S + SV F P + S S D IK+WD + C+ T+ H + S
Sbjct: 220 QHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWS 279
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
++++P G I S G+D + I
Sbjct: 280 VKYNPTGSKIVSAGDDRAIHI 300
Score = 191 (72.3 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 42/165 (25%), Positives = 79/165 (47%)
Query: 6 EKAE-DFMAHGASVNCLALG-KKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
EK E + G + +++ ++G + A+ D + LW L I S+ +
Sbjct: 52 EKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWT 111
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
V F + ++ G G + I+ + + +L+ I S+ + P G YL SG++D
Sbjct: 112 VAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
I ++D+ ++T GH+ I S+ FSPD Q + + +DG ++I
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKI 216
Score = 164 (62.8 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 39/138 (28%), Positives = 65/138 (47%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ATG KVN++ + SL + S+ + + L++G G I I+++A
Sbjct: 121 IATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 180
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
+ TL GH I S+ F P L + S D +IK++D++ T GH + S+ F
Sbjct: 181 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAF 240
Query: 151 SPDGQWIASGGEDGVVRI 168
SPD S D +++
Sbjct: 241 SPDDTHFVSSSSDKSIKV 258
Score = 142 (55.0 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 41/161 (25%), Positives = 72/161 (44%)
Query: 13 AHGASVNCLALGK--KSG-QVLATGGDDKKVNLWALG--KSNCIMSLSGHSTPVESVQFG 67
AH ++ A G+ K G + + TG D V +W K +L GH V SV
Sbjct: 14 AHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNIS 73
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
++ I++W+L ++++ +V F P Y+ +GS + ++
Sbjct: 74 QNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIF 133
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ ++ K I SI +SPDG+++ASG DG++ I
Sbjct: 134 GVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 174
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 31/115 (26%), Positives = 53/115 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + L S Q+L T DD + ++ + +N +LSGH + V SV F +
Sbjct: 189 HAMPIRSLTFSPDS-QLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHF 247
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
+ SIK+W+ + + T H+ + SV ++P G + S D I ++D
Sbjct: 248 VSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 77 (32.2 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 33/119 (27%), Positives = 53/119 (44%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ 355
S + D +N +D+ L+ T E ++ IR LTFS + L+ +G +K+Y + A
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Query: 356 YDAQPMGWGK-VQDLAVTGTQLWFRRVGTWSHQDSGFSTLDSYSAGSPVSTMGRERDQI 413
G G V +A + F V S D D+ S+ S V+T +DQ+
Sbjct: 225 AGTLS-GHGSWVLSVAFSPDDTHF--VS--SSSDKSIKVWDT-SSRSCVNTFFDHQDQV 277
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 250 (93.1 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 54/179 (30%), Positives = 90/179 (50%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVES 63
+E+ F AH + C+A+ +L T DD + LW K +C GH+ V
Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPFIL-TSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQ 147
Query: 64 VQFGNGEETLSAGCQ-SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSL 120
+ + A +IK+W L + TL GH+ + +D++ GD YL SG+
Sbjct: 148 IVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGAD 207
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI--GASFHLTNT 177
D +K+WD + K C+ T GH+++++ + F P+ I +G EDG VRI +++ L +T
Sbjct: 208 DRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPELPIIITGSEDGTVRIWHSSTYRLEST 266
Score = 126 (49.4 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 32/142 (22%), Positives = 59/142 (41%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ TG DD ++ ++ + HS + + + + IK+W+
Sbjct: 72 VVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 131
Query: 91 -TVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
+ + GH + + +P + S SLD IK+W L +T GH K +N I
Sbjct: 132 WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCI 191
Query: 149 RFSPDGQ--WIASGGEDGVVRI 168
+ G ++ SG +D +V+I
Sbjct: 192 DYYSGGDKPYLISGADDRLVKI 213
Score = 112 (44.5 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT--LNGHKSSITSVDFHPYGDYLCS 117
PV + +F + + G I+++N T++R H I + HP ++ +
Sbjct: 59 PVRAAKFVARKNWVVTGADDMQIRVFNYN--TLERVHMFEAHSDYIRCIAVHPTQPFILT 116
Query: 118 GSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
S D IKLWD +K C + GH+ + I +P D AS D +++
Sbjct: 117 SSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKV 169
Score = 62 (26.9 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE---CLLGGDTEGLKVYGWE 351
S+S DRT+ W L S T E + + + + GG+ + G D +K++ ++
Sbjct: 160 SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Score = 61 (26.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 28/101 (27%), Positives = 39/101 (38%)
Query: 270 TCVPVSVSRT-SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328
TCV ++S + P L I+T S D TV W + L ST + +
Sbjct: 220 TCVQTLEGHAQNVSCVSFHPELPIIIT--GSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 329 TFSEGGECLLGGDTEG---LKVYGWEPARQYDAQ-PMGWGK 365
G + G EG +K+ EPA DA + W K
Sbjct: 278 ASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAK 318
Score = 57 (25.1 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
S + DR V WD + + V T E ++ + ++F ++ G +G
Sbjct: 204 SGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPELPIIITGSEDG 251
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 250 (93.1 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 54/179 (30%), Positives = 89/179 (49%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVES 63
+E+ F AH + C+A+ +L T DD + LW K +C GH+ V
Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPYIL-TSSDDMLIKLWDWEKKWSCSQVFEGHTHYVMQ 147
Query: 64 VQFGNGEETLSAGCQ-SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSL 120
+ + A +IK+W L + TL GH + +D++ GD YL SG+
Sbjct: 148 IVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGAD 207
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI--GASFHLTNT 177
D +K+WD + K C+ T GH+++++ + F P+ I +G EDG VRI +++ L +T
Sbjct: 208 DRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPELPIIITGSEDGTVRIWHSSTYRLEST 266
Score = 126 (49.4 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 32/140 (22%), Positives = 58/140 (41%)
Query: 33 TGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP-T 91
TG DD ++ ++ + HS + + + + IK+W+ +
Sbjct: 74 TGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEKKWS 133
Query: 92 VQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
+ GH + + +P + S SLD IK+W L +T GH K +N I +
Sbjct: 134 CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHDKGVNCIDY 193
Query: 151 SPDGQ--WIASGGEDGVVRI 168
G ++ SG +D +V+I
Sbjct: 194 YSGGDKPYLISGADDRLVKI 213
Score = 116 (45.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 30/113 (26%), Positives = 50/113 (44%)
Query: 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT--LNGHKSSITSVDFHPYGDYLCS 117
PV + +F + + G I+++N T++R H I + HP Y+ +
Sbjct: 59 PVRASKFVARKNWVITGADDMQIRVFNYN--TLERVHMFEAHSDYIRCIAVHPTQPYILT 116
Query: 118 GSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
S D IKLWD +K C + GH+ + I +P D AS D +++
Sbjct: 117 SSDDMLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKV 169
Score = 62 (26.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE---CLLGGDTEGLKVYGWE 351
S+S DRT+ W L S T E + + + + GG+ + G D +K++ ++
Sbjct: 160 SASLDRTIKVWQLGSSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Score = 60 (26.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 27/105 (25%), Positives = 41/105 (39%)
Query: 270 TCVPVSVSRT-SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328
TCV ++S + P L I+T S D TV W + L ST + +
Sbjct: 220 TCVQTLEGHAQNVSCVNFHPELPIIIT--GSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 329 TFSEGGECLLGGDTEG---LKVYGWEPARQYDAQ-PMGWGKVQDL 369
+ G + G EG +K+ EPA D + W K ++
Sbjct: 278 SGLRGSNSVALGYDEGSIIIKLGREEPAMSMDTNGKIIWAKHSEI 322
Score = 59 (25.8 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 17/77 (22%), Positives = 32/77 (41%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQY 356
S + DR V WD + + V T E ++ + + F ++ G +G V W +
Sbjct: 204 SGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPELPIIITGSEDGT-VRIWHSSTYR 262
Query: 357 DAQPMGWGKVQDLAVTG 373
+ +G + V+G
Sbjct: 263 LESTLNYGMERVWCVSG 279
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 213 (80.0 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 43/140 (30%), Positives = 76/140 (54%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLA 88
V+ + +D + +W + +L GH+ VE + F + + L A C + +IK+W+
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLL-ASCSADMTIKLWDFQ 180
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
RT++GH +++SV P GD++ S S D IK+W+++ C+ T+ GH + + +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 149 RFSPDGQWIASGGEDGVVRI 168
R + DG IAS D VR+
Sbjct: 241 RPNQDGTLIASCSNDQTVRV 260
Score = 196 (74.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+LSGH +PV V F + + + +IK+W+ +RTL GH S+ + F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSG 162
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD + CI T GH +++S+ P+G I S D +++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKM 218
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 33/105 (31%), Positives = 58/105 (55%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K G L +G DK + +W + C+M+L GH V V F +G + + + ++++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ +TLN H+ +TS+DFH Y+ +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 154 (59.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEET 72
H SV ++ SG++LA+ D + LW CI ++ GH V SV NG+
Sbjct: 149 HTDSVEDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+SA + +IK+W + +T GH+ + V + G + S S D +++W + K
Sbjct: 208 VSAS-RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 133 GCIYTYRGHSKSINSIRFSPDGQW 156
C R H + I ++P+ +
Sbjct: 267 ECKAELREHEHVVECISWAPESSY 290
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
WA S S+S +T E+ + G L +G + +IK+W+++ TL GH +
Sbjct: 284 WAPESS--YSSIS-EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
+ V FH G ++ S + D +++WD + K C+ T H + S+ F ++ +G
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 163 DGVVRI 168
D V++
Sbjct: 401 DQTVKV 406
Score = 138 (53.6 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 46/170 (27%), Positives = 74/170 (43%)
Query: 2 RAKVEKA-EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
R ++ +A D++ ++ KK ++ DKK K ++ L
Sbjct: 8 RDELNRAIADYLRSNGYEAAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVME 67
Query: 61 VESVQFGNGEETLSAGC--QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG 118
+ES EE S G Q K W + P + L+GH+S +T V FHP + S
Sbjct: 68 LESKLNEAKEEFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSA 126
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D+ IK+WD T +GH+ S+ I F G+ +AS D +++
Sbjct: 127 SEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKL 176
Score = 75 (31.5 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGW 350
F+L S S D+T+ WD+ + T + + +R + F GG+ +L D + L+V+ +
Sbjct: 310 FLL--SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 351 EPAR 354
+ R
Sbjct: 368 KNKR 371
Score = 65 (27.9 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S SAD T+ WD + F + T + + + G+ ++ + + WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMWEVQ 222
Query: 354 RQY 356
Y
Sbjct: 223 TGY 225
Score = 49 (22.3 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
FIL S + D+T+ WD + + T + + L F + ++ G + +KV W
Sbjct: 352 FIL--SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--W 407
Query: 351 E 351
E
Sbjct: 408 E 408
Score = 48 (22.0 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334
+S++I+P + S+S D+T+ W+++ V T + +R + ++ G
Sbjct: 196 SSVAIMPNGDHI-----VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 221 (82.9 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 43/158 (27%), Positives = 77/158 (48%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F AH A+V + GQ+L T DDK V +W+ + + SL+ H V +F
Sbjct: 99 FRAHTATVRSVHFCS-DGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDG 157
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ + ++K+W+ + H +T VDFHP G + + +D+ +K+WD R
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTR 217
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ Y+ HS ++N++ F P G ++ + D ++I
Sbjct: 218 THRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKI 255
Score = 220 (82.5 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
V C A G+++ + DDK V LW C+ S H V V F ++A
Sbjct: 148 VRC-AKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAG 206
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
++K+W+ + + H +++ ++ FHP G+YL + S DS +K+ DL +YT
Sbjct: 207 MDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYT 266
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQY 197
GH ++ FS G++ ASGG D V + S + VD + PPPQ
Sbjct: 267 LHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS------NFDTVDYGDMKAR-RPPPQA 319
Query: 198 TSS 200
+S+
Sbjct: 320 SSA 322
Score = 199 (75.1 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 45/162 (27%), Positives = 72/162 (44%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
+A F H +V C+ SG +LA+G DK V +W H+ V SV F
Sbjct: 53 RAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHF 111
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ + L ++K+W+ +L H + + F P G + S S D +KL
Sbjct: 112 CSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKL 171
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD + C+++Y H + + F P G IA+ G D V++
Sbjct: 172 WDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKV 213
Score = 181 (68.8 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 34/113 (30%), Positives = 58/113 (51%)
Query: 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115
GH V V F + L++G ++ IW++ + GHK ++T V+F P G L
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 116 CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
SGS D +++W KG +R H+ ++ S+ F DGQ + + +D V++
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKV 129
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 68/273 (24%), Positives = 111/273 (40%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P+++R GH+ ++T VDF +L SGS+DS + +W ++ + Y + GH ++ +
Sbjct: 9 PSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVN 68
Query: 150 FSPDGQWIASGGEDGVVRI---GASFHLTNTSIHVVDLSLVH------PLGTPPPQYTSS 200
FSP G +ASG D VRI T H + VH L T T
Sbjct: 69 FSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVK 128
Query: 201 VPFSHNTSLRKSFTKGRPGGTKAKIDVT-RIEENAESEDQAGEEELFATIANPCDYSAI- 258
V +H S T+ AK R+ +A S+D+ +L+ + C +S
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSA-SDDKT--VKLWDKTSRECVHSYCE 185
Query: 259 ---FQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV 315
F + + SGTC+ ++ D TV WD LV
Sbjct: 186 HGGFVTYVDFHPSGTCI-----------------------AAAGMDNTVKVWDTRTHRLV 222
Query: 316 STTEKNSSTIRRLTFSEGGECLLGGDTEG-LKV 347
+ +S+ + L+F G L+ ++ LK+
Sbjct: 223 QHYQLHSAAVNALSFHPSGNYLITASSDSTLKI 255
Score = 53 (23.7 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
+++T SS D T+ DL + L+ T + + FS GE GG E + V+
Sbjct: 243 YLITASS--DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 256 (95.2 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 50/162 (30%), Positives = 85/162 (52%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E + H V ++ + +L+ +DK V LW+L ++S GH+ PV V+
Sbjct: 508 ENTRKLIGHSGPVYGVSFSPDNKYLLSCS-EDKTVRLWSLDTYTALVSYKGHTQPVWDVK 566
Query: 66 FGN-GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFI 124
F G ++A + ++W R GH + + V+FHP +Y+ +GS D
Sbjct: 567 FSPLGHYFVTAS-HDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTC 625
Query: 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
++WD+ C+ + GH+ S+N + SPDG+W+ASGGEDG++
Sbjct: 626 RMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGII 667
Score = 176 (67.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 40/142 (28%), Positives = 65/142 (45%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G T D+ LWA + +GH V+ V+F + G + ++W++
Sbjct: 571 GHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDV 630
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSK-SIN 146
R GH +S+ + P G +L SG D I +WD+ + + RGH++ S+
Sbjct: 631 HTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLY 690
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
S+ FS DG + SG D VR+
Sbjct: 691 SLAFSRDGTVLVSGCADNSVRV 712
Score = 160 (61.4 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 43/161 (26%), Positives = 74/161 (45%)
Query: 48 SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL---AVPTV-----------Q 93
S C+ + + + ++F + ++AG Q IK+W+L + +V
Sbjct: 451 SVCMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENT 510
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153
R L GH + V F P YL S S D ++LW L + +Y+GH++ + ++FSP
Sbjct: 511 RKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPL 570
Query: 154 GQWIASGGEDGVVRIGASFHLTNTSI---HVVDLSLV--HP 189
G + + D R+ A+ H+ I H+ D+ V HP
Sbjct: 571 GHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHP 611
Score = 158 (60.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 33/122 (27%), Positives = 60/122 (49%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H V+C+ S V TG DK +W + NC+ GH+ V +
Sbjct: 597 FAGHINDVDCVEFHPNSNYVF-TGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDG 655
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGH-KSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
L++G + G I +W++ +++ GH ++S+ S+ F G L SG D+ +++WD+
Sbjct: 656 RWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDV 715
Query: 130 RR 131
++
Sbjct: 716 KK 717
Score = 153 (58.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 40/166 (24%), Positives = 71/166 (42%)
Query: 17 SVNCLALGKKSGQVLATGGDDKKVNLWAL-GKS-NCIMS------------LSGHSTPVE 62
++ C+ S ++A G D + LW+L GK ++ L GHS PV
Sbjct: 463 NMTCIEFNDDS-TLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVY 521
Query: 63 SVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS 122
V F + L + + ++++W+L T + GH + V F P G Y + S D
Sbjct: 522 GVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQ 581
Query: 123 FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+LW + + GH ++ + F P+ ++ +G D R+
Sbjct: 582 TARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRM 627
Score = 60 (26.2 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
+ S+D+T WD+ + V +++++ L S G L G +G+ + W+
Sbjct: 618 TGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGI-ICVWD 671
Score = 41 (19.5 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 297 SSSADRTVNFWDLEK 311
S AD +V WD++K
Sbjct: 703 SGCADNSVRVWDVKK 717
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 246 (91.7 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 54/179 (30%), Positives = 89/179 (49%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVES 63
+E+ F AH + C+A+ +L T DD + LW K +C GH+ V
Sbjct: 60 LERVHMFEAHSDYIRCIAVHPTQPFIL-TSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQ 118
Query: 64 VQFGNGEETLSAGCQ-SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSL 120
+ + A +IK+W L + TL GH+ + +D++ GD YL SG+
Sbjct: 119 IVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGAD 178
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI--GASFHLTNT 177
D +K+WD + K C+ T GH+++++ F P+ I +G EDG VRI +++ L +T
Sbjct: 179 DRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLEST 237
Score = 126 (49.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 32/142 (22%), Positives = 59/142 (41%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ TG DD ++ ++ + HS + + + + IK+W+
Sbjct: 43 VVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 102
Query: 91 -TVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
+ + GH + + +P + S SLD IK+W L +T GH K +N I
Sbjct: 103 WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCI 162
Query: 149 RFSPDGQ--WIASGGEDGVVRI 168
+ G ++ SG +D +V+I
Sbjct: 163 DYYSGGDKPYLISGADDRLVKI 184
Score = 112 (44.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT--LNGHKSSITSVDFHPYGDYLCS 117
PV + +F + + G I+++N T++R H I + HP ++ +
Sbjct: 30 PVRAAKFVARKNWVVTGADDMQIRVFNYN--TLERVHMFEAHSDYIRCIAVHPTQPFILT 87
Query: 118 GSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
S D IKLWD +K C + GH+ + I +P D AS D +++
Sbjct: 88 SSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKV 140
Score = 62 (26.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE---CLLGGDTEGLKVYGWE 351
S+S DRT+ W L S T E + + + + GG+ + G D +K++ ++
Sbjct: 131 SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 188
Score = 59 (25.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 28/101 (27%), Positives = 38/101 (37%)
Query: 270 TCVPVSVSRT-SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328
TCV ++S P L I+T S D TV W + L ST + +
Sbjct: 191 TCVQTLEGHAQNVSCASFHPELPIIIT--GSEDGTVRIWHSSTYRLESTLNYGMERVWCV 248
Query: 329 TFSEGGECLLGGDTEG---LKVYGWEPARQYDAQ-PMGWGK 365
G + G EG +K+ EPA DA + W K
Sbjct: 249 ASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAK 289
Score = 55 (24.4 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
S + DR V WD + + V T E ++ + +F ++ G +G
Sbjct: 175 SGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDG 222
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 221 (82.9 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 49/164 (29%), Positives = 79/164 (48%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESV 64
V+ F H A VNC A Q+L T D K+ LW + + S+SGH+ PV+
Sbjct: 12 VDNIRYFSRHKAEVNCCAFSPDC-QLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCC 70
Query: 65 QFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFI 124
F + ++ S++ W + TL H+ S+ +V F P G +L SG D+
Sbjct: 71 VFSSDGRLFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRA 130
Query: 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+W ++ + +GH+ ++ S FS D Q +A+G D VR+
Sbjct: 131 LIWSIQSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRV 174
Score = 154 (59.3 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 38/147 (25%), Positives = 67/147 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEET 72
H V C G++ A+ D V W C +L+ H VE+V F +G+
Sbjct: 63 HTGPVKCCVFSS-DGRLFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWL 121
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR-R 131
LS G + ++ IW++ + L GH +++ S F + +GS D +++W LR R
Sbjct: 122 LSGGWDNRAL-IWSIQSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKLRDR 180
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIA 158
+ +GH ++ + FS G ++
Sbjct: 181 QAEAVVLQGHLGNVACLCFSVAGMLVS 207
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 246 (91.7 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 54/179 (30%), Positives = 89/179 (49%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVES 63
+E+ F AH + C+A+ +L T DD + LW K +C GH+ V
Sbjct: 60 LERVHMFEAHSDYIRCIAVHPTQPFIL-TSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQ 118
Query: 64 VQFGNGEETLSAGCQ-SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSL 120
+ + A +IK+W L + TL GH+ + +D++ GD YL SG+
Sbjct: 119 IVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGAD 178
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI--GASFHLTNT 177
D +K+WD + K C+ T GH+++++ F P+ I +G EDG VRI +++ L +T
Sbjct: 179 DRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLEST 237
Score = 126 (49.4 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 32/142 (22%), Positives = 59/142 (41%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ TG DD ++ ++ + HS + + + + IK+W+
Sbjct: 43 VVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 102
Query: 91 -TVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
+ + GH + + +P + S SLD IK+W L +T GH K +N I
Sbjct: 103 WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCI 162
Query: 149 RFSPDGQ--WIASGGEDGVVRI 168
+ G ++ SG +D +V+I
Sbjct: 163 DYYSGGDKPYLISGADDRLVKI 184
Score = 112 (44.5 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT--LNGHKSSITSVDFHPYGDYLCS 117
PV + +F + + G I+++N T++R H I + HP ++ +
Sbjct: 30 PVRAAKFVARKNWVVTGADDMQIRVFNYN--TLERVHMFEAHSDYIRCIAVHPTQPFILT 87
Query: 118 GSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
S D IKLWD +K C + GH+ + I +P D AS D +++
Sbjct: 88 SSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKV 140
Score = 62 (26.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE---CLLGGDTEGLKVYGWE 351
S+S DRT+ W L S T E + + + + GG+ + G D +K++ ++
Sbjct: 131 SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 188
Score = 59 (25.8 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 28/101 (27%), Positives = 38/101 (37%)
Query: 270 TCVPVSVSRT-SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328
TCV ++S P L I+T S D TV W + L ST + +
Sbjct: 191 TCVQTLEGHAQNVSCASFHPELPIIIT--GSEDGTVRIWHSSTYRLESTLNYGMERVWCV 248
Query: 329 TFSEGGECLLGGDTEG---LKVYGWEPARQYDAQ-PMGWGK 365
G + G EG +K+ EPA DA + W K
Sbjct: 249 ASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAK 289
Score = 55 (24.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
S + DR V WD + + V T E ++ + +F ++ G +G
Sbjct: 175 SGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDG 222
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 210 (79.0 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLA 88
V+ + +D + +W + +L GH+ V+ + F + + L A C + +IK+W+
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQ 180
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
RT++GH +++SV P GD++ S S D IK+W+++ C+ T+ GH + + +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 149 RFSPDGQWIASGGEDGVVRI 168
R + DG IAS D VR+
Sbjct: 241 RPNQDGTLIASCSNDQTVRV 260
Score = 196 (74.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+LSGH +PV V F + + + +IK+W+ +RTL GH S+ + F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD + CI T GH +++S+ P+G I S D +++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKM 218
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 33/105 (31%), Positives = 58/105 (55%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K G L +G DK + +W + C+M+L GH V V F +G + + + ++++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ +TLN H+ +TS+DFH Y+ +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 154 (59.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEET 72
H SV ++ SG++LA+ D + LW CI ++ GH V SV NG+
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+SA + +IK+W + +T GH+ + V + G + S S D +++W + K
Sbjct: 208 VSAS-RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 133 GCIYTYRGHSKSINSIRFSPDGQW 156
C R H + I ++P+ +
Sbjct: 267 ECKAELREHEHVVECISWAPESSY 290
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
WA S S+S +T E+ + G L +G + +IK+W+++ TL GH +
Sbjct: 284 WAPESS--YSSIS-EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
+ V FH G ++ S + D +++WD + K C+ T H + S+ F ++ +G
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 163 DGVVRI 168
D V++
Sbjct: 401 DQTVKV 406
Score = 141 (54.7 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 46/170 (27%), Positives = 74/170 (43%)
Query: 2 RAKVEKA-EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
R ++ +A D++ ++ KK ++ DKK K ++ L
Sbjct: 8 RDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIRLQKKVME 67
Query: 61 VESVQFGNGEETLSAGC--QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG 118
+ES EE S G Q K W + P + L+GH+S +T V FHP + S
Sbjct: 68 LESKLNEAKEEFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSA 126
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D+ IK+WD T +GH+ S+ I F G+ +AS D +++
Sbjct: 127 SEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Score = 75 (31.5 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGW 350
F+L S S D+T+ WD+ + T + + +R + F GG+ +L D + L+V+ +
Sbjct: 310 FLL--SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 351 EPAR 354
+ R
Sbjct: 368 KNKR 371
Score = 65 (27.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S SAD T+ WD + F + T + + + G+ ++ + + WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMWEVQ 222
Query: 354 RQY 356
Y
Sbjct: 223 TGY 225
Score = 49 (22.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
FIL S + D+T+ WD + + T + + L F + ++ G + +KV W
Sbjct: 352 FIL--SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--W 407
Query: 351 E 351
E
Sbjct: 408 E 408
Score = 48 (22.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334
+S++I+P + S+S D+T+ W+++ V T + +R + ++ G
Sbjct: 196 SSVAIMPNGDHI-----VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 210 (79.0 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLA 88
V+ + +D + +W + +L GH+ V+ + F + + L A C + +IK+W+
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQ 180
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
RT++GH +++SV P GD++ S S D IK+W+++ C+ T+ GH + + +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 149 RFSPDGQWIASGGEDGVVRI 168
R + DG IAS D VR+
Sbjct: 241 RPNQDGTLIASCSNDQTVRV 260
Score = 196 (74.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+LSGH +PV V F + + + +IK+W+ +RTL GH S+ + F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD + CI T GH +++S+ P+G I S D +++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKM 218
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 33/105 (31%), Positives = 58/105 (55%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K G L +G DK + +W + C+M+L GH V V F +G + + + ++++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ +TLN H+ +TS+DFH Y+ +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 154 (59.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEET 72
H SV ++ SG++LA+ D + LW CI ++ GH V SV NG+
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+SA + +IK+W + +T GH+ + V + G + S S D +++W + K
Sbjct: 208 VSAS-RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 133 GCIYTYRGHSKSINSIRFSPDGQW 156
C R H + I ++P+ +
Sbjct: 267 ECKAELREHEHVVECISWAPESSY 290
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
WA S S+S +T E+ + G L +G + +IK+W+++ TL GH +
Sbjct: 284 WAPESS--YSSIS-EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
+ V FH G ++ S + D +++WD + K C+ T H + S+ F ++ +G
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 163 DGVVRI 168
D V++
Sbjct: 401 DQTVKV 406
Score = 140 (54.3 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 46/170 (27%), Positives = 74/170 (43%)
Query: 2 RAKVEKA-EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
R ++ +A D++ ++ KK ++ DKK K ++ L
Sbjct: 8 RDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVME 67
Query: 61 VESVQFGNGEETLSAGC--QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG 118
+ES EE S G Q K W + P + L+GH+S +T V FHP + S
Sbjct: 68 LESKLNEAKEEFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSA 126
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D+ IK+WD T +GH+ S+ I F G+ +AS D +++
Sbjct: 127 SEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Score = 75 (31.5 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGW 350
F+L S S D+T+ WD+ + T + + +R + F GG+ +L D + L+V+ +
Sbjct: 310 FLL--SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 351 EPAR 354
+ R
Sbjct: 368 KNKR 371
Score = 65 (27.9 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S SAD T+ WD + F + T + + + G+ ++ + + WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMWEVQ 222
Query: 354 RQY 356
Y
Sbjct: 223 TGY 225
Score = 49 (22.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
FIL S + D+T+ WD + + T + + L F + ++ G + +KV W
Sbjct: 352 FIL--SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--W 407
Query: 351 E 351
E
Sbjct: 408 E 408
Score = 48 (22.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334
+S++I+P + S+S D+T+ W+++ V T + +R + ++ G
Sbjct: 196 SSVAIMPNGDHI-----VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 210 (79.0 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLA 88
V+ + +D + +W + +L GH+ V+ + F + + L A C + +IK+W+
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQ 180
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
RT++GH +++SV P GD++ S S D IK+W+++ C+ T+ GH + + +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 149 RFSPDGQWIASGGEDGVVRI 168
R + DG IAS D VR+
Sbjct: 241 RPNQDGTLIASCSNDQTVRV 260
Score = 196 (74.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+LSGH +PV V F + + + +IK+W+ +RTL GH S+ + F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD + CI T GH +++S+ P+G I S D +++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKM 218
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 33/105 (31%), Positives = 58/105 (55%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K G L +G DK + +W + C+M+L GH V V F +G + + + ++++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ +TLN H+ +TS+DFH Y+ +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 154 (59.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEET 72
H SV ++ SG++LA+ D + LW CI ++ GH V SV NG+
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+SA + +IK+W + +T GH+ + V + G + S S D +++W + K
Sbjct: 208 VSAS-RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 133 GCIYTYRGHSKSINSIRFSPDGQW 156
C R H + I ++P+ +
Sbjct: 267 ECKAELREHEHVVECISWAPESSY 290
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
WA S S+S +T E+ + G L +G + +IK+W+++ TL GH +
Sbjct: 284 WAPESS--YSSIS-EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
+ V FH G ++ S + D +++WD + K C+ T H + S+ F ++ +G
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 163 DGVVRI 168
D V++
Sbjct: 401 DQTVKV 406
Score = 140 (54.3 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 46/170 (27%), Positives = 74/170 (43%)
Query: 2 RAKVEKA-EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
R ++ +A D++ ++ KK ++ DKK K ++ L
Sbjct: 8 RDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVME 67
Query: 61 VESVQFGNGEETLSAGC--QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG 118
+ES EE S G Q K W + P + L+GH+S +T V FHP + S
Sbjct: 68 LESKLNEAKEEFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSA 126
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D+ IK+WD T +GH+ S+ I F G+ +AS D +++
Sbjct: 127 SEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Score = 75 (31.5 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGW 350
F+L S S D+T+ WD+ + T + + +R + F GG+ +L D + L+V+ +
Sbjct: 310 FLL--SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 351 EPAR 354
+ R
Sbjct: 368 KNKR 371
Score = 65 (27.9 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S SAD T+ WD + F + T + + + G+ ++ + + WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMWEVQ 222
Query: 354 RQY 356
Y
Sbjct: 223 TGY 225
Score = 49 (22.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
FIL S + D+T+ WD + + T + + L F + ++ G + +KV W
Sbjct: 352 FIL--SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--W 407
Query: 351 E 351
E
Sbjct: 408 E 408
Score = 48 (22.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334
+S++I+P + S+S D+T+ W+++ V T + +R + ++ G
Sbjct: 196 SSVAIMPNGDHI-----VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 210 (79.0 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLA 88
V+ + +D + +W + +L GH+ V+ + F + + L A C + +IK+W+
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQ 180
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
RT++GH +++SV P GD++ S S D IK+W+++ C+ T+ GH + + +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 149 RFSPDGQWIASGGEDGVVRI 168
R + DG IAS D VR+
Sbjct: 241 RPNQDGTLIASCSNDQTVRV 260
Score = 196 (74.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+LSGH +PV V F + + + +IK+W+ +RTL GH S+ + F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD + CI T GH +++S+ P+G I S D +++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKM 218
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 33/105 (31%), Positives = 58/105 (55%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K G L +G DK + +W + C+M+L GH V V F +G + + + ++++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ +TLN H+ +TS+DFH Y+ +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 154 (59.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEET 72
H SV ++ SG++LA+ D + LW CI ++ GH V SV NG+
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+SA + +IK+W + +T GH+ + V + G + S S D +++W + K
Sbjct: 208 VSAS-RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 133 GCIYTYRGHSKSINSIRFSPDGQW 156
C R H + I ++P+ +
Sbjct: 267 ECKAELREHEHVVECISWAPESSY 290
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
WA S S+S +T E+ + G L +G + +IK+W+++ TL GH +
Sbjct: 284 WAPESS--YSSIS-EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
+ V FH G ++ S + D +++WD + K C+ T H + S+ F ++ +G
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 163 DGVVRI 168
D V++
Sbjct: 401 DQTVKV 406
Score = 140 (54.3 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 46/170 (27%), Positives = 74/170 (43%)
Query: 2 RAKVEKA-EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
R ++ +A D++ ++ KK ++ DKK K ++ L
Sbjct: 8 RDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVME 67
Query: 61 VESVQFGNGEETLSAGC--QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG 118
+ES EE S G Q K W + P + L+GH+S +T V FHP + S
Sbjct: 68 LESKLNEAKEEFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSA 126
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D+ IK+WD T +GH+ S+ I F G+ +AS D +++
Sbjct: 127 SEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Score = 75 (31.5 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGW 350
F+L S S D+T+ WD+ + T + + +R + F GG+ +L D + L+V+ +
Sbjct: 310 FLL--SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 351 EPAR 354
+ R
Sbjct: 368 KNKR 371
Score = 65 (27.9 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S SAD T+ WD + F + T + + + G+ ++ + + WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMWEVQ 222
Query: 354 RQY 356
Y
Sbjct: 223 TGY 225
Score = 49 (22.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
FIL S + D+T+ WD + + T + + L F + ++ G + +KV W
Sbjct: 352 FIL--SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--W 407
Query: 351 E 351
E
Sbjct: 408 E 408
Score = 48 (22.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334
+S++I+P + S+S D+T+ W+++ V T + +R + ++ G
Sbjct: 196 SSVAIMPNGDHI-----VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 210 (79.0 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLA 88
V+ + +D + +W + +L GH+ V+ + F + + L A C + +IK+W+
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQ 180
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
RT++GH +++SV P GD++ S S D IK+W+++ C+ T+ GH + + +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 149 RFSPDGQWIASGGEDGVVRI 168
R + DG IAS D VR+
Sbjct: 241 RPNQDGTLIASCSNDQTVRV 260
Score = 196 (74.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+LSGH +PV V F + + + +IK+W+ +RTL GH S+ + F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD + CI T GH +++S+ P+G I S D +++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKM 218
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 33/105 (31%), Positives = 58/105 (55%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K G L +G DK + +W + C+M+L GH V V F +G + + + ++++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ +TLN H+ +TS+DFH Y+ +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 154 (59.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEET 72
H SV ++ SG++LA+ D + LW CI ++ GH V SV NG+
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+SA + +IK+W + +T GH+ + V + G + S S D +++W + K
Sbjct: 208 VSAS-RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 133 GCIYTYRGHSKSINSIRFSPDGQW 156
C R H + I ++P+ +
Sbjct: 267 ECKAELREHEHVVECISWAPESSY 290
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
WA S S+S +T E+ + G L +G + +IK+W+++ TL GH +
Sbjct: 284 WAPESS--YSSIS-EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
+ V FH G ++ S + D +++WD + K C+ T H + S+ F ++ +G
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 163 DGVVRI 168
D V++
Sbjct: 401 DQTVKV 406
Score = 140 (54.3 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 46/170 (27%), Positives = 74/170 (43%)
Query: 2 RAKVEKA-EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
R ++ +A D++ ++ KK ++ DKK K ++ L
Sbjct: 8 RDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVME 67
Query: 61 VESVQFGNGEETLSAGC--QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG 118
+ES EE S G Q K W + P + L+GH+S +T V FHP + S
Sbjct: 68 LESKLNEAKEEFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSA 126
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D+ IK+WD T +GH+ S+ I F G+ +AS D +++
Sbjct: 127 SEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Score = 75 (31.5 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGW 350
F+L S S D+T+ WD+ + T + + +R + F GG+ +L D + L+V+ +
Sbjct: 310 FLL--SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 351 EPAR 354
+ R
Sbjct: 368 KNKR 371
Score = 65 (27.9 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S SAD T+ WD + F + T + + + G+ ++ + + WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMWEVQ 222
Query: 354 RQY 356
Y
Sbjct: 223 TGY 225
Score = 49 (22.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
FIL S + D+T+ WD + + T + + L F + ++ G + +KV W
Sbjct: 352 FIL--SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--W 407
Query: 351 E 351
E
Sbjct: 408 E 408
Score = 48 (22.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334
+S++I+P + S+S D+T+ W+++ V T + +R + ++ G
Sbjct: 196 SSVAIMPNGDHI-----VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 210 (79.0 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLA 88
V+ + +D + +W + +L GH+ V+ + F + + L A C + +IK+W+
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQ 180
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
RT++GH +++SV P GD++ S S D IK+W+++ C+ T+ GH + + +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 149 RFSPDGQWIASGGEDGVVRI 168
R + DG IAS D VR+
Sbjct: 241 RPNQDGTLIASCSNDQTVRV 260
Score = 196 (74.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+LSGH +PV V F + + + +IK+W+ +RTL GH S+ + F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD + CI T GH +++S+ P+G I S D +++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKM 218
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 33/105 (31%), Positives = 58/105 (55%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K G L +G DK + +W + C+M+L GH V V F +G + + + ++++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ +TLN H+ +TS+DFH Y+ +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 154 (59.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEET 72
H SV ++ SG++LA+ D + LW CI ++ GH V SV NG+
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+SA + +IK+W + +T GH+ + V + G + S S D +++W + K
Sbjct: 208 VSAS-RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 133 GCIYTYRGHSKSINSIRFSPDGQW 156
C R H + I ++P+ +
Sbjct: 267 ECKAELREHEHVVECISWAPESSY 290
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
WA S S+S +T E+ + G L +G + +IK+W+++ TL GH +
Sbjct: 284 WAPESS--YSSIS-EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
+ V FH G ++ S + D +++WD + K C+ T H + S+ F ++ +G
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 163 DGVVRI 168
D V++
Sbjct: 401 DQTVKV 406
Score = 140 (54.3 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 46/170 (27%), Positives = 74/170 (43%)
Query: 2 RAKVEKA-EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
R ++ +A D++ ++ KK ++ DKK K ++ L
Sbjct: 8 RDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVME 67
Query: 61 VESVQFGNGEETLSAGC--QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG 118
+ES EE S G Q K W + P + L+GH+S +T V FHP + S
Sbjct: 68 LESKLNEAKEEFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSA 126
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D+ IK+WD T +GH+ S+ I F G+ +AS D +++
Sbjct: 127 SEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Score = 75 (31.5 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGW 350
F+L S S D+T+ WD+ + T + + +R + F GG+ +L D + L+V+ +
Sbjct: 310 FLL--SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 351 EPAR 354
+ R
Sbjct: 368 KNKR 371
Score = 65 (27.9 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S SAD T+ WD + F + T + + + G+ ++ + + WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMWEVQ 222
Query: 354 RQY 356
Y
Sbjct: 223 TGY 225
Score = 49 (22.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
FIL S + D+T+ WD + + T + + L F + ++ G + +KV W
Sbjct: 352 FIL--SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--W 407
Query: 351 E 351
E
Sbjct: 408 E 408
Score = 48 (22.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334
+S++I+P + S+S D+T+ W+++ V T + +R + ++ G
Sbjct: 196 SSVAIMPNGDHI-----VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 210 (79.0 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLA 88
V+ + +D + +W + +L GH+ V+ + F + + L A C + +IK+W+
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQ 180
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
RT++GH +++SV P GD++ S S D IK+W+++ C+ T+ GH + + +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 149 RFSPDGQWIASGGEDGVVRI 168
R + DG IAS D VR+
Sbjct: 241 RPNQDGTLIASCSNDQTVRV 260
Score = 196 (74.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+LSGH +PV V F + + + +IK+W+ +RTL GH S+ + F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD + CI T GH +++S+ P+G I S D +++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKM 218
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 33/105 (31%), Positives = 58/105 (55%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K G L +G DK + +W + C+M+L GH V V F +G + + + ++++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ +TLN H+ +TS+DFH Y+ +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 154 (59.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEET 72
H SV ++ SG++LA+ D + LW CI ++ GH V SV NG+
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+SA + +IK+W + +T GH+ + V + G + S S D +++W + K
Sbjct: 208 VSAS-RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 133 GCIYTYRGHSKSINSIRFSPDGQW 156
C R H + I ++P+ +
Sbjct: 267 ECKAELREHEHVVECISWAPESSY 290
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
WA S S+S +T E+ + G L +G + +IK+W+++ TL GH +
Sbjct: 284 WAPESS--YSSIS-EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
+ V FH G ++ S + D +++WD + K C+ T H + S+ F ++ +G
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 163 DGVVRI 168
D V++
Sbjct: 401 DQTVKV 406
Score = 140 (54.3 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 46/170 (27%), Positives = 74/170 (43%)
Query: 2 RAKVEKA-EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
R ++ +A D++ ++ KK ++ DKK K ++ L
Sbjct: 8 RDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVME 67
Query: 61 VESVQFGNGEETLSAGC--QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG 118
+ES EE S G Q K W + P + L+GH+S +T V FHP + S
Sbjct: 68 LESKLNEAKEEFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSA 126
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D+ IK+WD T +GH+ S+ I F G+ +AS D +++
Sbjct: 127 SEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Score = 75 (31.5 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGW 350
F+L S S D+T+ WD+ + T + + +R + F GG+ +L D + L+V+ +
Sbjct: 310 FLL--SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 351 EPAR 354
+ R
Sbjct: 368 KNKR 371
Score = 65 (27.9 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S SAD T+ WD + F + T + + + G+ ++ + + WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMWEVQ 222
Query: 354 RQY 356
Y
Sbjct: 223 TGY 225
Score = 49 (22.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
FIL S + D+T+ WD + + T + + L F + ++ G + +KV W
Sbjct: 352 FIL--SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--W 407
Query: 351 E 351
E
Sbjct: 408 E 408
Score = 48 (22.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334
+S++I+P + S+S D+T+ W+++ V T + +R + ++ G
Sbjct: 196 SSVAIMPNGDHI-----VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 210 (79.0 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLA 88
V+ + +D + +W + +L GH+ V+ + F + + L A C + +IK+W+
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQ 180
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
RT++GH +++SV P GD++ S S D IK+W+++ C+ T+ GH + + +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 149 RFSPDGQWIASGGEDGVVRI 168
R + DG IAS D VR+
Sbjct: 241 RPNQDGTLIASCSNDQTVRV 260
Score = 196 (74.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+LSGH +PV V F + + + +IK+W+ +RTL GH S+ + F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD + CI T GH +++S+ P+G I S D +++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKM 218
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 33/105 (31%), Positives = 58/105 (55%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K G L +G DK + +W + C+M+L GH V V F +G + + + ++++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ +TLN H+ +TS+DFH Y+ +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 154 (59.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEET 72
H SV ++ SG++LA+ D + LW CI ++ GH V SV NG+
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+SA + +IK+W + +T GH+ + V + G + S S D +++W + K
Sbjct: 208 VSAS-RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 133 GCIYTYRGHSKSINSIRFSPDGQW 156
C R H + I ++P+ +
Sbjct: 267 ECKAELREHEHVVECISWAPESSY 290
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
WA S S+S +T E+ + G L +G + +IK+W+++ TL GH +
Sbjct: 284 WAPESS--YSSIS-EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
+ V FH G ++ S + D +++WD + K C+ T H + S+ F ++ +G
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 163 DGVVRI 168
D V++
Sbjct: 401 DQTVKV 406
Score = 139 (54.0 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 44/161 (27%), Positives = 69/161 (42%)
Query: 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG 69
D++ ++ KK ++ DKK K ++ L +ES
Sbjct: 17 DYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAK 76
Query: 70 EETLSAGC--QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
EE S G Q K W + P + L+GH+S +T V FHP + S S D+ IK+W
Sbjct: 77 EEFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW 135
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
D T +GH+ S+ I F G+ +AS D +++
Sbjct: 136 DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Score = 75 (31.5 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGW 350
F+L S S D+T+ WD+ + T + + +R + F GG+ +L D + L+V+ +
Sbjct: 310 FLL--SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 351 EPAR 354
+ R
Sbjct: 368 KNKR 371
Score = 65 (27.9 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S SAD T+ WD + F + T + + + G+ ++ + + WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMWEVQ 222
Query: 354 RQY 356
Y
Sbjct: 223 TGY 225
Score = 49 (22.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
FIL S + D+T+ WD + + T + + L F + ++ G + +KV W
Sbjct: 352 FIL--SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--W 407
Query: 351 E 351
E
Sbjct: 408 E 408
Score = 48 (22.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334
+S++I+P + S+S D+T+ W+++ V T + +R + ++ G
Sbjct: 196 SSVAIMPNGDHI-----VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 246 (91.7 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 54/179 (30%), Positives = 89/179 (49%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVES 63
+E+ F AH + C+A+ +L T DD + LW K +C GH+ V
Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPFIL-TSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQ 147
Query: 64 VQFGNGEETLSAGCQ-SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSL 120
+ + A +IK+W L + TL GH+ + +D++ GD YL SG+
Sbjct: 148 IVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGAD 207
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI--GASFHLTNT 177
D +K+WD + K C+ T GH+++++ F P+ I +G EDG VRI +++ L +T
Sbjct: 208 DRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLEST 266
Score = 126 (49.4 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 32/142 (22%), Positives = 59/142 (41%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ TG DD ++ ++ + HS + + + + IK+W+
Sbjct: 72 VVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 131
Query: 91 -TVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
+ + GH + + +P + S SLD IK+W L +T GH K +N I
Sbjct: 132 WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCI 191
Query: 149 RFSPDGQ--WIASGGEDGVVRI 168
+ G ++ SG +D +V+I
Sbjct: 192 DYYSGGDKPYLISGADDRLVKI 213
Score = 112 (44.5 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT--LNGHKSSITSVDFHPYGDYLCS 117
PV + +F + + G I+++N T++R H I + HP ++ +
Sbjct: 59 PVRAAKFVARKNWVVTGADDMQIRVFNYN--TLERVHMFEAHSDYIRCIAVHPTQPFILT 116
Query: 118 GSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
S D IKLWD +K C + GH+ + I +P D AS D +++
Sbjct: 117 SSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKV 169
Score = 62 (26.9 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE---CLLGGDTEGLKVYGWE 351
S+S DRT+ W L S T E + + + + GG+ + G D +K++ ++
Sbjct: 160 SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Score = 59 (25.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 28/101 (27%), Positives = 38/101 (37%)
Query: 270 TCVPVSVSRT-SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328
TCV ++S P L I+T S D TV W + L ST + +
Sbjct: 220 TCVQTLEGHAQNVSCASFHPELPIIIT--GSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 329 TFSEGGECLLGGDTEG---LKVYGWEPARQYDAQ-PMGWGK 365
G + G EG +K+ EPA DA + W K
Sbjct: 278 ASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAK 318
Score = 55 (24.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
S + DR V WD + + V T E ++ + +F ++ G +G
Sbjct: 204 SGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDG 251
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 246 (91.7 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 54/179 (30%), Positives = 89/179 (49%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVES 63
+E+ F AH + C+A+ +L T DD + LW K +C GH+ V
Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPFIL-TSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQ 147
Query: 64 VQFGNGEETLSAGCQ-SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSL 120
+ + A +IK+W L + TL GH+ + +D++ GD YL SG+
Sbjct: 148 IVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGAD 207
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI--GASFHLTNT 177
D +K+WD + K C+ T GH+++++ F P+ I +G EDG VRI +++ L +T
Sbjct: 208 DRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLEST 266
Score = 126 (49.4 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 32/142 (22%), Positives = 59/142 (41%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ TG DD ++ ++ + HS + + + + IK+W+
Sbjct: 72 VVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 131
Query: 91 -TVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
+ + GH + + +P + S SLD IK+W L +T GH K +N I
Sbjct: 132 WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCI 191
Query: 149 RFSPDGQ--WIASGGEDGVVRI 168
+ G ++ SG +D +V+I
Sbjct: 192 DYYSGGDKPYLISGADDRLVKI 213
Score = 112 (44.5 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT--LNGHKSSITSVDFHPYGDYLCS 117
PV + +F + + G I+++N T++R H I + HP ++ +
Sbjct: 59 PVRAAKFVARKNWVVTGADDMQIRVFNYN--TLERVHMFEAHSDYIRCIAVHPTQPFILT 116
Query: 118 GSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
S D IKLWD +K C + GH+ + I +P D AS D +++
Sbjct: 117 SSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKV 169
Score = 62 (26.9 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE---CLLGGDTEGLKVYGWE 351
S+S DRT+ W L S T E + + + + GG+ + G D +K++ ++
Sbjct: 160 SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Score = 59 (25.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 28/101 (27%), Positives = 38/101 (37%)
Query: 270 TCVPVSVSRT-SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328
TCV ++S P L I+T S D TV W + L ST + +
Sbjct: 220 TCVQTLEGHAQNVSCASFHPELPIIIT--GSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 329 TFSEGGECLLGGDTEG---LKVYGWEPARQYDAQ-PMGWGK 365
G + G EG +K+ EPA DA + W K
Sbjct: 278 ASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAK 318
Score = 55 (24.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
S + DR V WD + + V T E ++ + +F ++ G +G
Sbjct: 204 SGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDG 251
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 246 (91.7 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 54/179 (30%), Positives = 89/179 (49%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVES 63
+E+ F AH + C+A+ +L T DD + LW K +C GH+ V
Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPFIL-TSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQ 147
Query: 64 VQFGNGEETLSAGCQ-SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSL 120
+ + A +IK+W L + TL GH+ + +D++ GD YL SG+
Sbjct: 148 IVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGAD 207
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI--GASFHLTNT 177
D +K+WD + K C+ T GH+++++ F P+ I +G EDG VRI +++ L +T
Sbjct: 208 DRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLEST 266
Score = 126 (49.4 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 32/142 (22%), Positives = 59/142 (41%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ TG DD ++ ++ + HS + + + + IK+W+
Sbjct: 72 VVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 131
Query: 91 -TVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
+ + GH + + +P + S SLD IK+W L +T GH K +N I
Sbjct: 132 WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCI 191
Query: 149 RFSPDGQ--WIASGGEDGVVRI 168
+ G ++ SG +D +V+I
Sbjct: 192 DYYSGGDKPYLISGADDRLVKI 213
Score = 112 (44.5 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT--LNGHKSSITSVDFHPYGDYLCS 117
PV + +F + + G I+++N T++R H I + HP ++ +
Sbjct: 59 PVRAAKFVARKNWVVTGADDMQIRVFNYN--TLERVHMFEAHSDYIRCIAVHPTQPFILT 116
Query: 118 GSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
S D IKLWD +K C + GH+ + I +P D AS D +++
Sbjct: 117 SSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKV 169
Score = 62 (26.9 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE---CLLGGDTEGLKVYGWE 351
S+S DRT+ W L S T E + + + + GG+ + G D +K++ ++
Sbjct: 160 SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Score = 59 (25.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 28/101 (27%), Positives = 38/101 (37%)
Query: 270 TCVPVSVSRT-SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328
TCV ++S P L I+T S D TV W + L ST + +
Sbjct: 220 TCVQTLEGHAQNVSCASFHPELPIIIT--GSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 329 TFSEGGECLLGGDTEG---LKVYGWEPARQYDAQ-PMGWGK 365
G + G EG +K+ EPA DA + W K
Sbjct: 278 ASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAK 318
Score = 55 (24.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
S + DR V WD + + V T E ++ + +F ++ G +G
Sbjct: 204 SGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDG 251
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 246 (91.7 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 54/179 (30%), Positives = 89/179 (49%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVES 63
+E+ F AH + C+A+ +L T DD + LW K +C GH+ V
Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPFIL-TSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQ 147
Query: 64 VQFGNGEETLSAGCQ-SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSL 120
+ + A +IK+W L + TL GH+ + +D++ GD YL SG+
Sbjct: 148 IVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGAD 207
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI--GASFHLTNT 177
D +K+WD + K C+ T GH+++++ F P+ I +G EDG VRI +++ L +T
Sbjct: 208 DRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLEST 266
Score = 126 (49.4 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 32/142 (22%), Positives = 59/142 (41%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ TG DD ++ ++ + HS + + + + IK+W+
Sbjct: 72 VVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 131
Query: 91 -TVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
+ + GH + + +P + S SLD IK+W L +T GH K +N I
Sbjct: 132 WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCI 191
Query: 149 RFSPDGQ--WIASGGEDGVVRI 168
+ G ++ SG +D +V+I
Sbjct: 192 DYYSGGDKPYLISGADDRLVKI 213
Score = 112 (44.5 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT--LNGHKSSITSVDFHPYGDYLCS 117
PV + +F + + G I+++N T++R H I + HP ++ +
Sbjct: 59 PVRAAKFVARKNWVVTGADDMQIRVFNYN--TLERVHMFEAHSDYIRCIAVHPTQPFILT 116
Query: 118 GSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
S D IKLWD +K C + GH+ + I +P D AS D +++
Sbjct: 117 SSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKV 169
Score = 62 (26.9 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE---CLLGGDTEGLKVYGWE 351
S+S DRT+ W L S T E + + + + GG+ + G D +K++ ++
Sbjct: 160 SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Score = 59 (25.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 28/101 (27%), Positives = 38/101 (37%)
Query: 270 TCVPVSVSRT-SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328
TCV ++S P L I+T S D TV W + L ST + +
Sbjct: 220 TCVQTLEGHAQNVSCASFHPELPIIIT--GSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 329 TFSEGGECLLGGDTEG---LKVYGWEPARQYDAQ-PMGWGK 365
G + G EG +K+ EPA DA + W K
Sbjct: 278 ASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAK 318
Score = 55 (24.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
S + DR V WD + + V T E ++ + +F ++ G +G
Sbjct: 204 SGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDG 251
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 246 (91.7 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 54/179 (30%), Positives = 89/179 (49%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVES 63
+E+ F AH + C+A+ +L T DD + LW K +C GH+ V
Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPFIL-TSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQ 147
Query: 64 VQFGNGEETLSAGCQ-SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSL 120
+ + A +IK+W L + TL GH+ + +D++ GD YL SG+
Sbjct: 148 IVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGAD 207
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI--GASFHLTNT 177
D +K+WD + K C+ T GH+++++ F P+ I +G EDG VRI +++ L +T
Sbjct: 208 DRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLEST 266
Score = 126 (49.4 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 32/142 (22%), Positives = 59/142 (41%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ TG DD ++ ++ + HS + + + + IK+W+
Sbjct: 72 VVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 131
Query: 91 -TVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
+ + GH + + +P + S SLD IK+W L +T GH K +N I
Sbjct: 132 WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCI 191
Query: 149 RFSPDGQ--WIASGGEDGVVRI 168
+ G ++ SG +D +V+I
Sbjct: 192 DYYSGGDKPYLISGADDRLVKI 213
Score = 112 (44.5 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT--LNGHKSSITSVDFHPYGDYLCS 117
PV + +F + + G I+++N T++R H I + HP ++ +
Sbjct: 59 PVRAAKFVARKNWVVTGADDMQIRVFNYN--TLERVHMFEAHSDYIRCIAVHPTQPFILT 116
Query: 118 GSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
S D IKLWD +K C + GH+ + I +P D AS D +++
Sbjct: 117 SSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKV 169
Score = 62 (26.9 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE---CLLGGDTEGLKVYGWE 351
S+S DRT+ W L S T E + + + + GG+ + G D +K++ ++
Sbjct: 160 SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Score = 59 (25.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 28/101 (27%), Positives = 38/101 (37%)
Query: 270 TCVPVSVSRT-SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328
TCV ++S P L I+T S D TV W + L ST + +
Sbjct: 220 TCVQTLEGHAQNVSCASFHPELPIIIT--GSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 329 TFSEGGECLLGGDTEG---LKVYGWEPARQYDAQ-PMGWGK 365
G + G EG +K+ EPA DA + W K
Sbjct: 278 ASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAK 318
Score = 55 (24.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
S + DR V WD + + V T E ++ + +F ++ G +G
Sbjct: 204 SGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDG 251
>UNIPROTKB|H3BTU7 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR026962
GO:GO:0051013 EMBL:AC018552 EMBL:AC092118 GO:GO:0008352
PANTHER:PTHR19845 HGNC:HGNC:6217 Ensembl:ENST00000563462
Uniprot:H3BTU7
Length = 276
Score = 168 (64.2 bits), Expect = 6.0e-17, Sum P(3) = 6.0e-17
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 782 NVWNLELCSAILPVIQDLLQSKYEMYITTACDTLNLILRTFGPVIKNNMKWSGGSIGVDI 841
++W L+LC+ +LP I+ LLQSKYE Y+ T C +L LIL+ F P+I +M + S+GVDI
Sbjct: 195 SLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLI-TDMLAAPPSVGVDI 253
Query: 842 SKEE 845
S+EE
Sbjct: 254 SREE 257
Score = 91 (37.1 bits), Expect = 6.0e-17, Sum P(3) = 6.0e-17
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 413 IVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAVLRNRQRSLGL 472
I+P + PIGL FLP + + Q ++ + + + MS I GHD M VL +R ++L
Sbjct: 83 IIPATRNEPIGLKASDFLP-AVKIPQ-QAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDT 140
Query: 473 V 473
V
Sbjct: 141 V 141
Score = 54 (24.1 bits), Expect = 6.0e-17, Sum P(3) = 6.0e-17
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 247 ATIANPCDYSAIFQPHRSLNRS 268
A I N DY+ IFQP S++R+
Sbjct: 3 AEIQNAEDYNEIFQPKNSISRT 24
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 214 (80.4 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 50/167 (29%), Positives = 75/167 (44%)
Query: 2 RAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPV 61
R V + + H VNC A G+ L T DD V +W + L+GH PV
Sbjct: 13 RLAVGRVRFYGQHHGEVNCSAFSP-DGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPV 71
Query: 62 ESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD 121
+S F +++ SI++W++A L GH+ S+ +V F P L SG D
Sbjct: 72 KSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWD 131
Query: 122 SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+W+++ ++ GH SI S FSP +A+G D V I
Sbjct: 132 KRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHI 178
Score = 207 (77.9 bits), Expect = 9.7e-15, Sum P(2) = 9.7e-15
Identities = 46/142 (32%), Positives = 72/142 (50%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+++A+ D + LW + +S C+ L GH VE+V F + L++G +W +
Sbjct: 80 GRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEV 139
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR---GHSKS 144
L GH SI S DF P D L +GS DS + +WDLR + +Y GH+ +
Sbjct: 140 QSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGN 199
Query: 145 INSIRFSPDGQWIASGGEDGVV 166
I+ + +S G +ASG D +
Sbjct: 200 ISCLCYSASGL-LASGSWDKTI 220
Score = 188 (71.2 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 48/158 (30%), Positives = 76/158 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H SV ++ S Q LA+GG DK+ +W + + L GH ++S F ++L
Sbjct: 109 HQRSVETVSFSPDSKQ-LASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSL 167
Query: 74 SAGCQSGSIKIWNL--AVPTVQ-RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ G ++ IW+L + P V L GH +I+ + + G L SGS D I +W
Sbjct: 168 ATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPT 226
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+GH+ +NS+ FSPD +AS G V++
Sbjct: 227 TNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKV 264
Score = 144 (55.7 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 37/133 (27%), Positives = 62/133 (46%)
Query: 31 LATGGDDKKVNLWALGKSNCIMS---LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
LATG D V++W L S ++S L GH+ + + + + L++G +I +W
Sbjct: 167 LATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCY-SASGLLASGSWDKTICVWKP 225
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+ L GH + S+ F P L S +K+WD C+ T +G ++
Sbjct: 226 TTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHA 285
Query: 148 IRFSPDGQWIASG 160
F+PDG+ + SG
Sbjct: 286 CIFTPDGKLLVSG 298
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 32/106 (30%), Positives = 51/106 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H +++CL SG +LA+G DK + +W +N + L GH+ V S+ F E L
Sbjct: 196 HTGNISCLCYSA-SG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKL 253
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGS 119
++ S ++K+W+ TL G + F P G L SG+
Sbjct: 254 ASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSGA 299
Score = 51 (23.0 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 297 SSSADRTVNFWDLEKFS-LVS--TTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEP 352
+ S D TV+ WDL + +VS E ++ I L +S G LL + + W+P
Sbjct: 169 TGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG--LLASGSWDKTICVWKP 225
Score = 42 (19.8 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG 340
S+ RTV WD + T + F+ G+ L+ G
Sbjct: 255 SAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSG 298
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 259 (96.2 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 61/179 (34%), Positives = 91/179 (50%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVES 63
++K + F AH + C+A+ VL++ DD + LW K C GHS V
Sbjct: 304 MDKIKVFEAHADYIRCVAVHPTLPYVLSSS-DDMLIKLWDWEKGWLCTQIFEGHSHYVMQ 362
Query: 64 VQFGNGE-ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSL 120
V F + T ++ +IKIWNL P TL+ H + VD+ GD YL +GS
Sbjct: 363 VTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSD 422
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI--GASFHLTNT 177
D K+WD + K C+ T GH+ +++++ F P+ I +G EDG VRI ++ L NT
Sbjct: 423 DHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENT 481
Score = 136 (52.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 37/130 (28%), Positives = 54/130 (41%)
Query: 42 LWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKS 101
+W + S PV S +F ++ + AG I+++N + H
Sbjct: 256 IWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHAD 315
Query: 102 SITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG--CIYTYRGHSKSINSIRFSP-DGQWIA 158
I V HP Y+ S S D IKLWD KG C + GHS + + F+P D A
Sbjct: 316 YIRCVAVHPTLPYVLSSSDDMLIKLWDWE-KGWLCTQIFEGHSHYVMQVTFNPKDTNTFA 374
Query: 159 SGGEDGVVRI 168
S D ++I
Sbjct: 375 SASLDRTIKI 384
Score = 56 (24.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
+ S D T WD + S V T E ++ + ++F ++ G +G
Sbjct: 419 TGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDG 466
Score = 54 (24.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE---CLLGGDTEGLKVYGWE 351
S+S DRT+ W+L T + + + + + GG+ + G D KV+ ++
Sbjct: 375 SASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 432
Score = 50 (22.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 270 TCVPVSVSRT-SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328
+CV T ++S + P L I+T S D TV W + L +T + +
Sbjct: 435 SCVQTLEGHTHNVSAVSFHPELPIIIT--GSEDGTVRIWHATTYRLENTLNYGLERVWAI 492
Query: 329 TFSEGGECLLGGDTEG 344
+G ++ G EG
Sbjct: 493 GHIKGSRRVVIGYDEG 508
Score = 39 (18.8 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 215 KGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRS 264
+G G + + D R EE+++ Q EEE A+ D + + + S
Sbjct: 1077 EGEDGEEEEEED--RQEESSDGRQQNVEEEAVVVDADSTDGAVLVNGNES 1124
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 226 (84.6 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 45/158 (28%), Positives = 78/158 (49%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F AH A+V + GQ L T DDK V +W+ + + SLS H V +F
Sbjct: 99 FRAHTATVRSVHFCS-DGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDG 157
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ + ++K+W+ + H +T VDFHP G + + S+D+ +K+WD+R
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVR 217
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ Y+ HS ++N++ F P G ++ + D ++I
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKI 255
Score = 226 (84.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 55/183 (30%), Positives = 86/183 (46%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
V C A G+++ + DDK V LW C+ S H V V F ++A
Sbjct: 148 VRC-ARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAS 206
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
++K+W++ + + H +++ ++ FHP G+YL + S DS +K+ DL +YT
Sbjct: 207 MDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYT 266
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPP-PQ 196
GH ++ FS G++ ASGG D V + S + VVD V + PP P
Sbjct: 267 LHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS------NFDVVDYREVIKVHRPPAPL 320
Query: 197 YTS 199
TS
Sbjct: 321 ATS 323
Score = 197 (74.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 51/190 (26%), Positives = 83/190 (43%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
+A F H +V C+ SG +LA+G DK V +W H+ V SV F
Sbjct: 53 RAYRFAGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHF 111
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ ++L ++K+W+ +L+ H + + F P G + S S D +KL
Sbjct: 112 CSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKL 171
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-GASFH--LTNTSIH--V 181
WD + C+++Y H + + F P G IA+ D V++ H L + +H
Sbjct: 172 WDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAA 231
Query: 182 VDLSLVHPLG 191
V+ HP G
Sbjct: 232 VNALSFHPSG 241
Score = 180 (68.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 33/113 (29%), Positives = 58/113 (51%)
Query: 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115
GH + SV F + L++G + +W++ + GHK ++T V+F P G L
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 116 CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
SGS D +++W KG +R H+ ++ S+ F DGQ + + +D V++
Sbjct: 77 ASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKV 129
Score = 173 (66.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 69/273 (25%), Positives = 113/273 (41%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P+++R GH+ +ITSVDF L SGS+DS + +W ++ + Y + GH ++ +
Sbjct: 9 PSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVN 68
Query: 150 FSPDGQWIASGGEDGVVRI---GASFHLTNTSIHVVDLSLVH------PLGTPPPQYTSS 200
FSP G +ASG D VRI T H + VH L T T
Sbjct: 69 FSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK 128
Query: 201 VPFSHNTSLRKSFTKGRPGGTKAKIDVT-RIEENAESEDQAGEEELFATIANPCDYSAI- 258
V +H S ++ A+ R+ +A S+D+ +L+ + C +S
Sbjct: 129 VWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSA-SDDKT--VKLWDKTSRECVHSYCE 185
Query: 259 ---FQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV 315
F + + SGTC+ ++S D TV WD+ L+
Sbjct: 186 HGGFVTYVDFHPSGTCI-----------------------AAASMDNTVKVWDVRTHRLL 222
Query: 316 STTEKNSSTIRRLTFSEGGECLLGGDTEG-LKV 347
+ +S+ + L+F G LL ++ LK+
Sbjct: 223 QHYQLHSAAVNALSFHPSGNYLLTASSDSTLKI 255
Score = 55 (24.4 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
++LT SS D T+ DL + L+ T + + FS GE GG E + V+
Sbjct: 243 YLLTASS--DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 244 (91.0 bits), Expect = 8.8e-17, P = 8.8e-17
Identities = 54/179 (30%), Positives = 89/179 (49%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVES 63
+E+ F AH + C+A+ +L T DD + LW K +C GH+ V
Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPFIL-TSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQ 147
Query: 64 VQFGNGEETLSAGCQ-SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSL 120
+ + A +IK+W L + TL GH+ + +D++ GD YL SG+
Sbjct: 148 IVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGAD 207
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI--GASFHLTNT 177
D +K+WD + K C+ T GH+++++ F P+ I +G EDG VRI +++ L +T
Sbjct: 208 DRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPELPIIITGSEDGTVRIWHSSTYRLEST 266
Score = 126 (49.4 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 32/142 (22%), Positives = 59/142 (41%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ TG DD ++ ++ + HS + + + + IK+W+
Sbjct: 72 VVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 131
Query: 91 -TVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
+ + GH + + +P + S SLD IK+W L +T GH K +N I
Sbjct: 132 WSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCI 191
Query: 149 RFSPDGQ--WIASGGEDGVVRI 168
+ G ++ SG +D +V+I
Sbjct: 192 DYYSGGDKPYLISGADDRLVKI 213
Score = 112 (44.5 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT--LNGHKSSITSVDFHPYGDYLCS 117
PV + +F + + G I+++N T++R H I + HP ++ +
Sbjct: 59 PVRAAKFVARKNWVVTGADDMQIRVFNYN--TLERVHMFEAHSDYIRCIAVHPTQPFILT 116
Query: 118 GSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
S D IKLWD +K C + GH+ + I +P D AS D +++
Sbjct: 117 SSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKV 169
Score = 62 (26.9 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE---CLLGGDTEGLKVYGWE 351
S+S DRT+ W L S T E + + + + GG+ + G D +K++ ++
Sbjct: 160 SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Score = 60 (26.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 28/101 (27%), Positives = 38/101 (37%)
Query: 270 TCVPVSVSRT-SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328
TCV ++S P L I+T S D TV W + L ST + +
Sbjct: 220 TCVQTPEGHAQNVSCATFHPELPIIIT--GSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 329 TFSEGGECLLGGDTEG---LKVYGWEPARQYDAQ-PMGWGK 365
G + G EG +K+ EPA DA + W K
Sbjct: 278 ASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAK 318
Score = 59 (25.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
S + DR V WD + + V T E ++ + TF ++ G +G
Sbjct: 204 SGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPELPIIITGSEDG 251
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 208 (78.3 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLA 88
V+ + +D + +W + +L GH+ V+ + F + + L A C + +IK+W+
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLL-ASCSADMTIKLWDFQ 180
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
RT++GH +++SV P GD++ S S D IK+W+++ C+ T+ GH + + +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 149 RFSPDGQWIASGGEDGVVRI 168
R + DG IAS D VR+
Sbjct: 241 RPNQDGTLIASCSNDQTVRV 260
Score = 196 (74.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+LSGH +PV V F + + + +IK+W+ +RTL GH S+ + F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTG 162
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD + CI T GH +++S+ P+G I S D +++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKM 218
Score = 192 (72.6 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 33/105 (31%), Positives = 58/105 (55%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K G L +G DK + +W + C+M+L GH V V F +G + + + ++++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ +TLN H+ +TS+DFH Y+ +GS+D +K+W+ R
Sbjct: 366 DFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 151 (58.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEET 72
H SV ++ +G++LA+ D + LW CI ++ GH V SV NG+
Sbjct: 149 HTDSVQDISFDH-TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+SA + +IK+W + +T GH+ + V + G + S S D +++W + K
Sbjct: 208 VSAS-RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 133 GCIYTYRGHSKSINSIRFSPDGQW 156
C R H + I ++P+ +
Sbjct: 267 ECKAELREHEHVVECISWAPESSY 290
Score = 148 (57.2 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 33/126 (26%), Positives = 61/126 (48%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
WA S +S +T E+ + G L +G + +IK+W+++ TL GH +
Sbjct: 284 WAPESSYSTIS---EATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNW 340
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
+ V FH G ++ S + D +++WD + K C+ T H + S+ F ++ +G
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 163 DGVVRI 168
D V++
Sbjct: 401 DQTVKV 406
Score = 140 (54.3 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 46/170 (27%), Positives = 74/170 (43%)
Query: 2 RAKVEKA-EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
R ++ +A D++ ++ KK ++ DKK K ++ L
Sbjct: 8 RDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIRLQKKVME 67
Query: 61 VESVQFGNGEETLSAGC--QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG 118
+ES EE S G Q K W + P + L+GH+S +T V FHP + S
Sbjct: 68 LESKLNEAKEEFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSA 126
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D+ IK+WD T +GH+ S+ I F G+ +AS D +++
Sbjct: 127 SEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKL 176
Score = 75 (31.5 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGW 350
F+L S S D+T+ WD+ + T + + +R + F GG+ +L D + L+V+ +
Sbjct: 310 FLL--SGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 351 EPAR 354
+ R
Sbjct: 368 KNKR 371
Score = 65 (27.9 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S SAD T+ WD + F + T + + + G+ ++ + + WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMWEVQ 222
Query: 354 RQY 356
Y
Sbjct: 223 TGY 225
Score = 50 (22.7 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
FIL S + D+T+ WD + + T + + L F + ++ G + +KV W
Sbjct: 352 FIL--SCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--W 407
Query: 351 E 351
E
Sbjct: 408 E 408
Score = 48 (22.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334
+S++I+P + S+S D+T+ W+++ V T + +R + ++ G
Sbjct: 196 SSVAIMPNGDHI-----VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 234 (87.4 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 43/141 (30%), Positives = 75/141 (53%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ L T DK V +W + C +L+GH V + + + + + ++KI+ +
Sbjct: 99 GKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEI 158
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+ +TL GH + + +F+P + SGS D +++WD++ CI T HS +++
Sbjct: 159 VTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSA 218
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ F+ DG IASG DG+VRI
Sbjct: 219 VSFNRDGSLIASGSYDGLVRI 239
Score = 218 (81.8 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 51/154 (33%), Positives = 75/154 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C +S V++ G D+ V +W + CI +L HS PV +V F +
Sbjct: 170 HNNYVFCCNFNPQSSLVVS-GSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLI 228
Query: 74 SAGCQSGSIKIWNLAVPTVQRTL-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
++G G ++IW+ A +TL + + V F P G Y+ + +LDS +KLWD +
Sbjct: 229 ASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKG 288
Query: 133 GCIYTYRGHSKSINSI--RFS-PDGQWIASGGED 163
+ Y GH S I FS G+WI SG ED
Sbjct: 289 KTLKQYTGHENSKYCIFANFSVTGGKWIISGSED 322
Score = 181 (68.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 39/156 (25%), Positives = 75/156 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H VN +A S + + + DDK + ++ + S +L GH+ V F +
Sbjct: 128 HKLGVNDIAWSSDS-RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+G S++IW++ +TL H +++V F+ G + SGS D +++WD
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ 246
Query: 134 CIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
CI T + + ++FSP+G++I + D +++
Sbjct: 247 CIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKL 282
Score = 168 (64.2 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 69/264 (26%), Positives = 113/264 (42%)
Query: 95 TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154
TL GH SI+S F P G YL + S D +K+W++ C T GH +N I +S D
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSL--RKS 212
+ + S +D ++I F + TS L H Y F+ +SL S
Sbjct: 142 RCVVSASDDKTLKI---FEIV-TSRMTKTLK-GHN------NYVFCCNFNPQSSLVVSGS 190
Query: 213 FTKG-RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTC 271
F + R K + + + +++ + IA+ Y + + + N G C
Sbjct: 191 FDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASG-SYDGLVRIWDTAN--GQC 247
Query: 272 VPVSVSRTS--LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS--TTEKNSSTIRR 327
+ V + ++ + SP +IL +S+ D T+ WD K + T +NS
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYIL--ASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIF 305
Query: 328 LTFS-EGGECLLGGDTEGLKVYGW 350
FS GG+ ++ G +E K+Y W
Sbjct: 306 ANFSVTGGKWIISG-SEDCKIYIW 328
Score = 150 (57.9 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 41/153 (26%), Positives = 76/153 (49%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-SGHSTPVESVQFG-NGE 70
AH V+ ++ + G ++A+G D V +W CI +L + PV V+F NG+
Sbjct: 211 AHSDPVSAVSFNR-DGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGK 269
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV--DFHPYGD-YLCSGSLDSFIKLW 127
L++ S ++K+W+ + + GH++S + +F G ++ SGS D I +W
Sbjct: 270 YILASNLDS-TLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIW 328
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG 160
+L+ + + GH++ + + P IASG
Sbjct: 329 NLQTREIVQCLEGHTQPVLASDCHPVQNIIASG 361
Score = 145 (56.1 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 44 ALGKSN--CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKS 101
A G +N + +L GH+ + S +F + L ++KIWN+ +RTL GHK
Sbjct: 71 ASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKL 130
Query: 102 SITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG 161
+ + + + S S D +K++++ T +GH+ + F+P + SG
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGS 190
Query: 162 EDGVVRI 168
D VRI
Sbjct: 191 FDESVRI 197
Score = 118 (46.6 bits), Expect = 0.0010, P = 0.0010
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN----GEETLSAGCQSGSI 82
+G+ + D + LW K + +GH + F N G + + +G + I
Sbjct: 267 NGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCI-FANFSVTGGKWIISGSEDCKI 325
Query: 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL--DSFIKLW 127
IWNL + + L GH + + D HP + + SG+L D+ I +W
Sbjct: 326 YIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 79 (32.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S D +V WD++ + T +S + ++F+ G + G +GL V W+ A
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL-VRIWDTA 243
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 234 (87.4 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 43/141 (30%), Positives = 75/141 (53%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ L T DK V +W + C +L+GH V + + + + + ++KI+ +
Sbjct: 99 GKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEI 158
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+ +TL GH + + +F+P + SGS D +++WD++ CI T HS +++
Sbjct: 159 VTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSA 218
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ F+ DG IASG DG+VRI
Sbjct: 219 VSFNRDGSLIASGSYDGLVRI 239
Score = 218 (81.8 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 51/154 (33%), Positives = 75/154 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C +S V++ G D+ V +W + CI +L HS PV +V F +
Sbjct: 170 HNNYVFCCNFNPQSSLVVS-GSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLI 228
Query: 74 SAGCQSGSIKIWNLAVPTVQRTL-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
++G G ++IW+ A +TL + + V F P G Y+ + +LDS +KLWD +
Sbjct: 229 ASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKG 288
Query: 133 GCIYTYRGHSKSINSI--RFS-PDGQWIASGGED 163
+ Y GH S I FS G+WI SG ED
Sbjct: 289 KTLKQYTGHENSKYCIFANFSVTGGKWIISGSED 322
Score = 181 (68.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 39/156 (25%), Positives = 75/156 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H VN +A S + + + DDK + ++ + S +L GH+ V F +
Sbjct: 128 HKLGVNDIAWSSDS-RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+G S++IW++ +TL H +++V F+ G + SGS D +++WD
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQ 246
Query: 134 CIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
CI T + + ++FSP+G++I + D +++
Sbjct: 247 CIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKL 282
Score = 168 (64.2 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 69/264 (26%), Positives = 113/264 (42%)
Query: 95 TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154
TL GH SI+S F P G YL + S D +K+W++ C T GH +N I +S D
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSL--RKS 212
+ + S +D ++I F + TS L H Y F+ +SL S
Sbjct: 142 RCVVSASDDKTLKI---FEIV-TSRMTKTLK-GHN------NYVFCCNFNPQSSLVVSGS 190
Query: 213 FTKG-RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTC 271
F + R K + + + +++ + IA+ Y + + + N G C
Sbjct: 191 FDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASG-SYDGLVRIWDTAN--GQC 247
Query: 272 VPVSVSRTS--LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS--TTEKNSSTIRR 327
+ V + ++ + SP +IL +S+ D T+ WD K + T +NS
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYIL--ASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIF 305
Query: 328 LTFS-EGGECLLGGDTEGLKVYGW 350
FS GG+ ++ G +E K+Y W
Sbjct: 306 ANFSVTGGKWIISG-SEDCKIYIW 328
Score = 150 (57.9 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 41/153 (26%), Positives = 76/153 (49%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-SGHSTPVESVQFG-NGE 70
AH V+ ++ + G ++A+G D V +W CI +L + PV V+F NG+
Sbjct: 211 AHSDPVSAVSFNR-DGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGK 269
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV--DFHPYGD-YLCSGSLDSFIKLW 127
L++ S ++K+W+ + + GH++S + +F G ++ SGS D I +W
Sbjct: 270 YILASNLDS-TLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIW 328
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG 160
+L+ + + GH++ + + P IASG
Sbjct: 329 NLQTREIVQCLEGHTQPVLASDCHPVQNIIASG 361
Score = 145 (56.1 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 44 ALGKSN--CIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKS 101
A G +N + +L GH+ + S +F + L ++KIWN+ +RTL GHK
Sbjct: 71 ASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKL 130
Query: 102 SITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG 161
+ + + + S S D +K++++ T +GH+ + F+P + SG
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGS 190
Query: 162 EDGVVRI 168
D VRI
Sbjct: 191 FDESVRI 197
Score = 118 (46.6 bits), Expect = 0.0010, P = 0.0010
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN----GEETLSAGCQSGSI 82
+G+ + D + LW K + +GH + F N G + + +G + I
Sbjct: 267 NGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCI-FANFSVTGGKWIISGSEDCKI 325
Query: 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL--DSFIKLW 127
IWNL + + L GH + + D HP + + SG+L D+ I +W
Sbjct: 326 YIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 79 (32.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S D +V WD++ + T +S + ++F+ G + G +GL V W+ A
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL-VRIWDTA 243
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 207 (77.9 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 41/140 (29%), Positives = 76/140 (54%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLA 88
V+ + +D + +W + +L GH+ V+ + F + + L A C + +IK+W+
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQ 180
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
RT++GH +++SV P GD++ S + D IK+W+++ C+ T+ GH + + +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 149 RFSPDGQWIASGGEDGVVRI 168
R + DG IAS D VR+
Sbjct: 241 RPNQDGTLIASCSNDQTVRV 260
Score = 196 (74.1 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+LSGH +PV V F + + + +IK+W+ +RTL GH S+ + F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD + CI T GH +++S+ P+G I S D +++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKM 218
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 33/105 (31%), Positives = 58/105 (55%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K G L +G DK + +W + C+M+L GH V V F +G + + + ++++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ +TLN H+ +TS+DFH Y+ +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 154 (59.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEET 72
H SV ++ SG++LA+ D + LW CI ++ GH V SV NG+
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+SA + +IK+W + +T GH+ + V + G + S S D +++W + K
Sbjct: 208 VSAA-RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266
Query: 133 GCIYTYRGHSKSINSIRFSPDGQW 156
C R H + I ++P+ +
Sbjct: 267 ECKAELREHEHVVECISWAPESSY 290
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
WA S S+S +T E+ + G L +G + +IK+W+++ TL GH +
Sbjct: 284 WAPESS--YSSIS-EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
+ V FH G ++ S + D +++WD + K C+ T H + S+ F ++ +G
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 163 DGVVRI 168
D V++
Sbjct: 401 DQTVKV 406
Score = 140 (54.3 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 46/170 (27%), Positives = 74/170 (43%)
Query: 2 RAKVEKA-EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
R ++ +A D++ ++ KK ++ DKK K ++ L
Sbjct: 8 RDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVME 67
Query: 61 VESVQFGNGEETLSAGC--QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG 118
+ES EE S G Q K W + P + L+GH+S +T V FHP + S
Sbjct: 68 LESKLNEAKEEFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSA 126
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D+ IK+WD T +GH+ S+ I F G+ +AS D +++
Sbjct: 127 SEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176
Score = 75 (31.5 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGW 350
F+L S S D+T+ WD+ + T + + +R + F GG+ +L D + L+V+ +
Sbjct: 310 FLL--SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 351 EPAR 354
+ R
Sbjct: 368 KNKR 371
Score = 63 (27.2 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S SAD T+ WD + F + T + + + G+ ++ + + WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKT-IKMWEVQ 222
Query: 354 RQY 356
Y
Sbjct: 223 TGY 225
Score = 49 (22.3 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
FIL S + D+T+ WD + + T + + L F + ++ G + +KV W
Sbjct: 352 FIL--SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--W 407
Query: 351 E 351
E
Sbjct: 408 E 408
Score = 45 (20.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 11/56 (19%), Positives = 28/56 (50%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334
+S++I+P + S++ D+T+ W+++ V T + +R + ++ G
Sbjct: 196 SSVAIMPNGDHI-----VSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 233 (87.1 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 48/157 (30%), Positives = 82/157 (52%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H S++ + G+ L T DK V +W + +C +L+GH V + +++
Sbjct: 78 HTKSISAVKFSP-CGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSI 136
Query: 74 SAGCQSGSIKIWNLAVPTVQ--RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
++KI+ VPTV+ +TL GH + + +F+P + SGS D +++WD+R
Sbjct: 137 VTASDDKTLKIYE--VPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRT 194
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T HS ++++ F+ DG I SG DG+VRI
Sbjct: 195 GMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRI 231
Score = 221 (82.9 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 51/163 (31%), Positives = 80/163 (49%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESV 64
V+ A+ H V C +S V++ G D+ V +W + C+ +L HS PV +V
Sbjct: 153 VKMAKTLKGHTNYVFCCNFNPQSSLVVS-GSFDESVRIWDVRTGMCVKTLPAHSDPVSAV 211
Query: 65 QFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL-NGHKSSITSVDFHPYGDYLCSGSLDSF 123
F +++G G ++IW+ A +TL + + V F P G Y+ S +LD+
Sbjct: 212 SFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNT 271
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSI--RFS-PDGQWIASGGED 163
+KLWD + + Y+GH + I FS G+WI SG ED
Sbjct: 272 LKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSED 314
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 39/156 (25%), Positives = 73/156 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H VN A S ++ T DDK + ++ + +L GH+ V F +
Sbjct: 120 HKLGVNDFAWSADSKSIV-TASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLV 178
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+G S++IW++ +TL H +++V F+ G + SGS D +++WD
Sbjct: 179 VSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQ 238
Query: 134 CIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T + + ++FSP+G++I S D +++
Sbjct: 239 CVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKL 274
Score = 156 (60.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 43/166 (25%), Positives = 81/166 (48%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-SGHSTPVESVQFG-NGE 70
AH V+ ++ + G ++ +G D V +W C+ +L + PV V+F NG+
Sbjct: 203 AHSDPVSAVSFNR-DGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGK 261
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV--DFHPYGD-YLCSGSLDSFIKLW 127
LS+ + ++K+W+ + GH+++ + +F G ++ SGS D I +W
Sbjct: 262 YILSSNLDN-TLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVW 320
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGG--EDGVVRIGAS 171
+L+ K + + GH++++ + P IASG D +RI S
Sbjct: 321 NLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIWRS 366
Score = 146 (56.5 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 62/264 (23%), Positives = 110/264 (41%)
Query: 95 TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154
T+ GH SI++V F P G +L + S D +K+W++ C T GH +N +S D
Sbjct: 74 TIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADS 133
Query: 155 QWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSL--RKS 212
+ I + +D ++I V + + L Y F+ +SL S
Sbjct: 134 KSIVTASDDKTLKI----------YEVPTVKMAKTL-KGHTNYVFCCNFNPQSSLVVSGS 182
Query: 213 FTKG-RPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTC 271
F + R + + V + +++ + I + Y + + + N G C
Sbjct: 183 FDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSG-SYDGLVRIWDTAN--GQC 239
Query: 272 VPVSVSRTS--LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTE--KNSSTIRR 327
V V + ++ + SP +IL SS+ D T+ WD K + + +N+
Sbjct: 240 VKTLVDDENPPVAFVKFSPNGKYIL--SSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIF 297
Query: 328 LTFS-EGGECLLGGDTEGLKVYGW 350
FS GG+ ++ G +E K+Y W
Sbjct: 298 ANFSVTGGKWIISG-SEDCKIYVW 320
Score = 142 (55.0 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 30/118 (25%), Positives = 57/118 (48%)
Query: 51 IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP 110
I ++ GH+ + +V+F + L ++KIWN++ + +RTL GHK + +
Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSA 131
Query: 111 YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ + S D +K++++ T +GH+ + F+P + SG D VRI
Sbjct: 132 DSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRI 189
Score = 79 (32.9 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S D +V WD+ V T +S + ++F+ G + G +GL V W+ A
Sbjct: 177 LVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGL-VRIWDTA 235
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 215 (80.7 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 48/165 (29%), Positives = 81/165 (49%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K+ +F AH A V + GQ LAT +DK + +W + + + SL H+ V +F
Sbjct: 94 KSSEFKAHTAPVRSVDFSA-DGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKF 152
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVDFHPYGDYLCSGSLDSF 123
+ + + +IKIW+ T ++ +N S+ VDF+P G + S D
Sbjct: 153 SPDGRLIVSCSEDKTIKIWDT---TNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHT 209
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+K+WD+R + Y+ HS +N + F P G +I + DG ++I
Sbjct: 210 VKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKI 254
Score = 199 (75.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 45/141 (31%), Positives = 64/141 (45%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G +LA+ D+ V LW K H+ PV SV F + L+ + SIK+WN+
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNM 131
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+L H + F P G + S S D IK+WD K C+ + N
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ F+P+G IAS G D V+I
Sbjct: 192 VDFNPNGTCIASAGSDHTVKI 212
Score = 199 (75.1 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 45/151 (29%), Positives = 73/151 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEET 72
H V C A G+++ + +DK + +W C+ + S V F NG
Sbjct: 143 HTHWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCI 201
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
SAG ++KIW++ V + + H + V FHP G+Y+ + S D +K+ DL
Sbjct: 202 ASAGSDH-TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEG 260
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGED 163
IYT +GH+ + ++ FS G+ +SGG D
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKGGELFSSGGAD 291
Score = 185 (70.2 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 45/158 (28%), Positives = 73/158 (46%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A++ + SG+ LAT D + LW GH V SVQF
Sbjct: 14 FKGHKAAITSVDFSP-SGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLG 72
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L++ + ++++W H + + SVDF G +L + S D IK+W++
Sbjct: 73 NLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMY 132
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
R+ +Y+ H+ + +FSPDG+ I S ED ++I
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Score = 174 (66.3 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P ++R GHK++ITSVDF P G L + S D+F+ LW+ + + + Y GH + S++
Sbjct: 8 PVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQ 67
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSP G +AS D VR+
Sbjct: 68 FSPLGNLLASASRDRTVRL 86
Score = 68 (29.0 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG--DTEGL 345
+I+T SS D T+ DL + L+ T + ++ + ++FS+GGE G DT+ L
Sbjct: 242 YIITASS--DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVL 295
Score = 63 (27.2 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKV 347
S+ +D TV WD+ L+ + +S + ++F G ++ ++G LK+
Sbjct: 203 SAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKI 254
Score = 57 (25.1 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
L S S D+T+ WD V+ + + F+ G C+ G +K++
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIW 213
Score = 46 (21.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 8/53 (15%), Positives = 29/53 (54%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
++S D+++ W++ + + + +++ +R FS G ++ + + +K++
Sbjct: 119 TASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 227 (85.0 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 53/184 (28%), Positives = 85/184 (46%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
V C A G+++ + DDK V LW C+ S H V V F ++A
Sbjct: 110 VRC-AKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAG 168
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
++K+W++ + + H +++ + FHP G+YL + S DS +K+ DL +YT
Sbjct: 169 MDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYT 228
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQY 197
GH ++ FS G++ ASGG D V + S + +VD V + PP
Sbjct: 229 LHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS------NFDIVDHGEVTKVPRPPATL 282
Query: 198 TSSV 201
SS+
Sbjct: 283 ASSM 286
Score = 221 (82.9 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 44/158 (27%), Positives = 76/158 (48%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F AH A+V + GQ T DDK V +WA + + SLS H V +F
Sbjct: 61 FRAHTATVRSVHFCS-DGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 119
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ + ++K+W+ + + H +T VDFHP G + + +D+ +K+WD+R
Sbjct: 120 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ Y+ HS ++N + F P G ++ + D ++I
Sbjct: 180 THRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 217
Score = 196 (74.1 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 53/191 (27%), Positives = 83/191 (43%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
+A F H +V C+ SG +LA+G DK V +W H+ V SV F
Sbjct: 15 RAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHF 73
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ ++ ++K+W +L+ H + + F P G + S S D +KL
Sbjct: 74 CSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKL 133
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-GASFH--LTNTSIH--- 180
WD + C+++Y H + + F P G IA+ G D V++ H L + +H
Sbjct: 134 WDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAA 193
Query: 181 VVDLSLVHPLG 191
V LS HP G
Sbjct: 194 VNGLSF-HPSG 203
Score = 150 (57.9 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 27/90 (30%), Positives = 48/90 (53%)
Query: 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGH 141
+ +W++ + GHK ++T V+F P G L SGS D +++W KG +R H
Sbjct: 5 LMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAH 64
Query: 142 SKSINSIRFSPDGQWIASGGEDGVVRIGAS 171
+ ++ S+ F DGQ + +D V++ A+
Sbjct: 65 TATVRSVHFCSDGQSFVTASDDKTVKVWAT 94
Score = 149 (57.5 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 32/132 (24%), Positives = 59/132 (44%)
Query: 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96
D + +W + + +GH V V F L++G + +++IW V
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61
Query: 97 NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQW 156
H +++ SV F G + S D +K+W R+ +++ H + +FSPDG+
Sbjct: 62 RAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRL 121
Query: 157 IASGGEDGVVRI 168
I S +D V++
Sbjct: 122 IVSASDDKTVKL 133
Score = 61 (26.5 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKV 347
++ D TV WD+ L+ + +S+ + L+F G L+ ++ LK+
Sbjct: 166 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 217
Score = 58 (25.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
L S+S D+TV WD V + ++ + + F G C+ + +KV+
Sbjct: 121 LIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 176
Score = 53 (23.7 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
+++T SS D T+ DL + L+ T + + FS GE GG E + V+
Sbjct: 205 YLITASS--DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 48 (22.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 11/53 (20%), Positives = 27/53 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVY 348
++S D+TV W + + + ++ + +R FS G ++ D + +K++
Sbjct: 82 TASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 134
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 213 (80.0 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 48/165 (29%), Positives = 81/165 (49%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K +F AH A V + GQ LAT +DK + +W++ + + SL H+ V +F
Sbjct: 52 KFSEFKAHTAPVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKF 110
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVDFHPYGDYLCSGSLDSF 123
+ + + +IKIW+ T ++ +N S+ VDF+P G + S D
Sbjct: 111 SPDGRLIVSCSEDKTIKIWDT---TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQT 167
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+K+WD+R + Y+ HS +N I F P G ++ + DG ++I
Sbjct: 168 VKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKI 212
Score = 197 (74.4 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 44/151 (29%), Positives = 73/151 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEET 72
H V C A G+++ + +DK + +W C+ + S V F +G
Sbjct: 101 HTHWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCI 159
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
SAG ++K+W++ V + + H + + FHP G+YL + S D +K+ DL
Sbjct: 160 ASAGSDQ-TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEG 218
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGED 163
IYT +GH+ + ++ FS G+ ASGG D
Sbjct: 219 RLIYTLQGHTGPVFTVSFSKGGELFASGGAD 249
Score = 194 (73.4 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 43/141 (30%), Positives = 63/141 (44%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G +LA+ D+ V LW K H+ PV SV F + L+ + SIK+W++
Sbjct: 30 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 89
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+L H + F P G + S S D IK+WD K C+ + N
Sbjct: 90 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 149
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ F+P G IAS G D V++
Sbjct: 150 VDFNPSGTCIASAGSDQTVKV 170
Score = 159 (61.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 35/116 (30%), Positives = 60/116 (51%)
Query: 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLN---GHKSSITSVDFHPYG 112
GH V SVQF L++ + ++++W +P + + H + + SVDF G
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLW---IPDKRGKFSEFKAHTAPVRSVDFSADG 72
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+L + S D IK+W + R+ +Y+ H+ + +FSPDG+ I S ED ++I
Sbjct: 73 QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 128
Score = 155 (59.6 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSK 143
+WN GHK +TSV F P+G+ L S S D ++LW ++G ++ H+
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 144 SINSIRFSPDGQWIASGGEDGVVRIGASF 172
+ S+ FS DGQ++A+ ED +++ + +
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMY 90
Score = 123 (48.4 bits), Expect = 0.00036, P = 0.00036
Identities = 28/101 (27%), Positives = 45/101 (44%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
SG +A+ G D+ V +W + + + HS V + F L G++KI +
Sbjct: 155 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 214
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
L + TL GH + +V F G+ SG D+ + LW
Sbjct: 215 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 255
Score = 67 (28.6 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG--DTEGL 345
+++T SS D T+ DL + L+ T + ++ + ++FS+GGE G DT+ L
Sbjct: 200 YLITASS--DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 253
Score = 65 (27.9 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKV 347
S+ +D+TV WD+ L+ + +S + ++F G L+ ++G LK+
Sbjct: 161 SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKI 212
Score = 60 (26.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
L S S D+T+ WD V+ + + F+ G C+ G + +KV+
Sbjct: 116 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 171
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 206 (77.6 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 36/115 (31%), Positives = 62/115 (53%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L+GH + SV+F + + + +IK+W+ +RTL GH +++ +DF G+
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD + C+ T GH +++ +RF+P G + S D +++
Sbjct: 162 LLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKV 216
Score = 198 (74.8 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 46/152 (30%), Positives = 71/152 (46%)
Query: 19 NCLALGK--KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAG 76
NC+ K S ++ + +D + +W +L GH+ V+ + F L A
Sbjct: 107 NCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLL-AS 165
Query: 77 CQSG-SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI 135
C + +IK+W+ +TL+GH +++ V F P GD L S S D IK+W+ CI
Sbjct: 166 CSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCI 225
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
T GH + I S DG IAS D ++
Sbjct: 226 KTLVGHEDWVRKITVSEDGSCIASCSNDQTIK 257
Score = 179 (68.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 38/126 (30%), Positives = 62/126 (49%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K+G +LA+ D + LW +C+ +L GH V V+F + L + + +IK+W
Sbjct: 158 KTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVW 217
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI 145
A +TL GH+ + + G + S S D IK W++ + C+ TYR HS +
Sbjct: 218 EAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVV 277
Query: 146 NSIRFS 151
+ FS
Sbjct: 278 ECLAFS 283
Score = 156 (60.0 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 24 GKKSGQV--LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSG 80
G GQ LATG DK + +W L C+ + GH V +V+F G+ LS G
Sbjct: 310 GNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVG-DDK 368
Query: 81 SIKIWNLAVPTVQRTLN-GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+I++W++A +T+N H I+ +DF + ++ +G +D IK+W L+
Sbjct: 369 TIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 156 (60.0 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 49/153 (32%), Positives = 73/153 (47%)
Query: 28 GQVLATGGDDKKV-NLWALGKSNCIMSLSGH--STPV--ESVQFGNGEET------LSAG 76
G+ LAT + V A +N I+ + G STP V+ G G L+ G
Sbjct: 264 GECLATYREHSHVVECLAFSTAN-IIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATG 322
Query: 77 CQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIY 136
+ +IKIW LA T GH + + +V FHP G +L S D I++WD+ + CI
Sbjct: 323 SRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIK 382
Query: 137 TYR-GHSKSINSIRFSPDGQWIASGGEDGVVRI 168
T H+ I+ + F IA+GG D V+++
Sbjct: 383 TINEAHTHFISCLDFCLHNPHIATGGVDDVIKV 415
Score = 149 (57.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
+ G +A+ +D+ + W + K C+ + HS VE + F T + GS+
Sbjct: 242 EDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFS----TANIIDIPGSL--- 294
Query: 86 NLAVPTVQ-RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS 144
L+ P + + G ++ G YL +GS D IK+W+L C+ TY GH
Sbjct: 295 -LSTPEGKSKVKQGPGGNLVG----QCG-YLATGSRDKTIKIWELATGRCLATYIGHDNW 348
Query: 145 INSIRFSPDGQWIASGGEDGVVRI 168
+ ++RF P G+++ S G+D +R+
Sbjct: 349 VRAVRFHPCGKFLLSVGDDKTIRV 372
Score = 126 (49.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P + L GH++ I SV FHP + S S D+ IK+WD T +GH+ ++ I
Sbjct: 96 PPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDID 155
Query: 150 FSPDGQWIASGGEDGVVRI 168
F G +AS D +++
Sbjct: 156 FDKTGNLLASCSADLTIKL 174
Score = 73 (30.8 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECL 337
SSS D+T+ W+ + T + +R++T SE G C+
Sbjct: 207 SSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCI 247
Score = 68 (29.0 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 291 CFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYG 349
C L T S D+T+ W+L ++T + + +R + F G+ LL GD + ++V
Sbjct: 316 CGYLATGSR-DKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRV-- 372
Query: 350 WEPAR 354
W+ A+
Sbjct: 373 WDIAQ 377
Score = 55 (24.4 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS 331
S S D+T+ W++ K ++T ++S + L FS
Sbjct: 249 SCSNDQTIKTWNIVKGECLATYREHSHVVECLAFS 283
Score = 47 (21.6 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVST-TEKNSSTIRRLTFS-EGGECLLGGDTEGLKVY 348
F+L+ D+T+ WD+ + + T E ++ I L F GG + +KV+
Sbjct: 360 FLLSVGD--DKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 213 (80.0 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 48/165 (29%), Positives = 81/165 (49%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K +F AH A V + GQ LAT +DK + +W++ + + SL H+ V +F
Sbjct: 94 KFSEFKAHTAPVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKF 152
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVDFHPYGDYLCSGSLDSF 123
+ + + +IKIW+ T ++ +N S+ VDF+P G + S D
Sbjct: 153 SPDGRLIVSCSEDKTIKIWDT---TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQT 209
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+K+WD+R + Y+ HS +N I F P G ++ + DG ++I
Sbjct: 210 VKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKI 254
Score = 197 (74.4 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 44/151 (29%), Positives = 73/151 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEET 72
H V C A G+++ + +DK + +W C+ + S V F +G
Sbjct: 143 HTHWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCI 201
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
SAG ++K+W++ V + + H + + FHP G+YL + S D +K+ DL
Sbjct: 202 ASAGSDQ-TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEG 260
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGED 163
IYT +GH+ + ++ FS G+ ASGG D
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKGGELFASGGAD 291
Score = 194 (73.4 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 43/141 (30%), Positives = 63/141 (44%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G +LA+ D+ V LW K H+ PV SV F + L+ + SIK+W++
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+L H + F P G + S S D IK+WD K C+ + N
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ F+P G IAS G D V++
Sbjct: 192 VDFNPSGTCIASAGSDQTVKV 212
Score = 187 (70.9 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 47/161 (29%), Positives = 77/161 (47%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A++ L L +G+ LAT D + LW GH V SVQF
Sbjct: 14 FKGHKAAITSLDLSP-NGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHG 72
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLN---GHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
L++ + ++++W +P + + H + + SVDF G +L + S D IK+W
Sbjct: 73 NLLASASRDRTVRLW---IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ R+ +Y+ H+ + +FSPDG+ I S ED ++I
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Score = 173 (66.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 34/118 (28%), Positives = 62/118 (52%)
Query: 56 GHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDY 114
GH + S+ NG++ +A + + +WN GHK +TSV F P+G+
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDT-FLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNL 74
Query: 115 LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172
L S S D ++LW ++G ++ H+ + S+ FS DGQ++A+ ED +++ + +
Sbjct: 75 LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMY 132
Score = 171 (65.3 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 31/79 (39%), Positives = 46/79 (58%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P ++R GHK++ITS+D P G L + S D+F+ LW+ + Y Y GH + S++
Sbjct: 8 PVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQ 67
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSP G +AS D VR+
Sbjct: 68 FSPHGNLLASASRDRTVRL 86
Score = 123 (48.4 bits), Expect = 0.00042, P = 0.00042
Identities = 28/101 (27%), Positives = 45/101 (44%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
SG +A+ G D+ V +W + + + HS V + F L G++KI +
Sbjct: 197 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 256
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
L + TL GH + +V F G+ SG D+ + LW
Sbjct: 257 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 67 (28.6 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG--DTEGL 345
+++T SS D T+ DL + L+ T + ++ + ++FS+GGE G DT+ L
Sbjct: 242 YLITASS--DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Score = 65 (27.9 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKV 347
S+ +D+TV WD+ L+ + +S + ++F G L+ ++G LK+
Sbjct: 203 SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKI 254
Score = 60 (26.2 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
L S S D+T+ WD V+ + + F+ G C+ G + +KV+
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 213
Score = 45 (20.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 8/53 (15%), Positives = 28/53 (52%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
++S D+++ W + + + + +++ +R FS G ++ + + +K++
Sbjct: 119 TASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 236 (88.1 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 54/163 (33%), Positives = 78/163 (47%)
Query: 14 HGASVNCLALGKKS-GQVLATGGDDKKVNLWALGKSNCIMSLS----GHSTPVESVQFGN 68
+G ++ +L S G+ + +G DKK +W + K C +L G V SV
Sbjct: 366 YGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSP 425
Query: 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
++AG +++W+ GH S+ SV F P G L SGSLD +KLWD
Sbjct: 426 DGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWD 485
Query: 129 LR----RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
L R C T+ GH + S+ FSPDG W+ SG +D V+
Sbjct: 486 LSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQ 528
Score = 212 (79.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 46/145 (31%), Positives = 74/145 (51%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G LATG +DK V +W + + GH + S+ + + + +G KIW++
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI 398
Query: 88 AVPTVQRTLN----GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSK 143
TL G K+ +TSV P G + +GSLD+ ++LWD + + Y GH
Sbjct: 399 EKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLD 458
Query: 144 SINSIRFSPDGQWIASGGEDGVVRI 168
S+ S+ FSPDG+ +ASG D +++
Sbjct: 459 SVYSVAFSPDGKSLASGSLDKSLKL 483
Score = 189 (71.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 44/166 (26%), Positives = 80/166 (48%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP-----VESVQF 66
+ H + V C+ G+ LATG + + ++ + + + S + SV F
Sbjct: 278 LQHNSVVCCVNFSN-DGKYLATGCN-RSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCF 335
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
L+ G + ++K+W++ +Q T GH+ I S+D+ G ++ SGS D K+
Sbjct: 336 SPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKI 395
Query: 127 WDLRRKGCIYTYR----GHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+ + C +T G + S+ SPDG+ +A+G D +VR+
Sbjct: 396 WDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRL 441
Score = 182 (69.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 43/129 (33%), Positives = 63/129 (48%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+++A G D V LW + GH V SV F ++L++G S+K+W+L
Sbjct: 427 GRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDL 486
Query: 88 AVPT----VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSK 143
+ + T NGHK + SV F P G +L SGS D ++ WD R +GH
Sbjct: 487 SGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKN 546
Query: 144 SINSIRFSP 152
S+ S+ SP
Sbjct: 547 SVISVALSP 555
Score = 59 (25.8 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-GLKVYGWEP 352
L + S D V WD + + E + ++ + FS G+ L G + LK++
Sbjct: 429 LVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSG 488
Query: 353 AR 354
+R
Sbjct: 489 SR 490
Score = 46 (21.3 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 297 SSSADRTVNFWD 308
S S DR+V FWD
Sbjct: 520 SGSKDRSVQFWD 531
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 227 (85.0 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 53/184 (28%), Positives = 85/184 (46%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
V C A G+++ + DDK V LW C+ S H V V F ++A
Sbjct: 148 VRC-AKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAG 206
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
++K+W++ + + H +++ + FHP G+YL + S DS +K+ DL +YT
Sbjct: 207 MDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYT 266
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQY 197
GH ++ FS G++ ASGG D V + S + +VD V + PP
Sbjct: 267 LHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS------NFDIVDHGEVTKVPRPPATL 320
Query: 198 TSSV 201
SS+
Sbjct: 321 ASSM 324
Score = 221 (82.9 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 44/158 (27%), Positives = 76/158 (48%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F AH A+V + GQ T DDK V +WA + + SLS H V +F
Sbjct: 99 FRAHTATVRSVHFCS-DGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 157
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ + ++K+W+ + + H +T VDFHP G + + +D+ +K+WD+R
Sbjct: 158 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ Y+ HS ++N + F P G ++ + D ++I
Sbjct: 218 THRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 255
Score = 196 (74.1 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 53/191 (27%), Positives = 83/191 (43%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
+A F H +V C+ SG +LA+G DK V +W H+ V SV F
Sbjct: 53 RAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHF 111
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ ++ ++K+W +L+ H + + F P G + S S D +KL
Sbjct: 112 CSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKL 171
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-GASFH--LTNTSIH--- 180
WD + C+++Y H + + F P G IA+ G D V++ H L + +H
Sbjct: 172 WDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAA 231
Query: 181 VVDLSLVHPLG 191
V LS HP G
Sbjct: 232 VNGLSF-HPSG 241
Score = 179 (68.1 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115
GH V V F + L++G + +W++ + GHK ++T V+F P G L
Sbjct: 17 GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 116 CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGAS 171
SGS D +++W KG +R H+ ++ S+ F DGQ + +D V++ A+
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWAT 132
Score = 175 (66.7 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 40/158 (25%), Positives = 71/158 (44%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H +V C+ + Q LA+G D + +W + + +GH V V F
Sbjct: 15 FKGHRDAVTCVDFSINTKQ-LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSG 73
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L++G + +++IW V H +++ SV F G + S D +K+W
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATH 133
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
R+ +++ H + +FSPDG+ I S +D V++
Sbjct: 134 RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKL 171
Score = 164 (62.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P+++R GH+ ++T VDF L SGS+DS + +W ++ + Y + GH ++ +
Sbjct: 9 PSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVN 68
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSP G +ASG D VRI
Sbjct: 69 FSPSGHLLASGSRDKTVRI 87
Score = 61 (26.5 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKV 347
++ D TV WD+ L+ + +S+ + L+F G L+ ++ LK+
Sbjct: 204 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 255
Score = 58 (25.5 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
L S+S D+TV WD V + ++ + + F G C+ + +KV+
Sbjct: 159 LIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 53 (23.7 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
+++T SS D T+ DL + L+ T + + FS GE GG E + V+
Sbjct: 243 YLITASS--DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 48 (22.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 11/53 (20%), Positives = 27/53 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVY 348
++S D+TV W + + + ++ + +R FS G ++ D + +K++
Sbjct: 120 TASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 224 (83.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
V C A G+++ + DDK V LW C+ S H V V F ++A
Sbjct: 179 VRC-AKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAG 237
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
++K+W++ + + H +++ ++ FHP G+YL + S DS +K+ DL +YT
Sbjct: 238 MDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYT 297
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQY 197
GH ++ FS G++ ASGG D V + S + V+D V + PP
Sbjct: 298 LHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS------NFDVIDYGEVLRVQRPPATL 351
Query: 198 TSS 200
SS
Sbjct: 352 ASS 354
Score = 217 (81.4 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 42/158 (26%), Positives = 76/158 (48%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F AH A+V + GQ T DDK + +W+ + + SLS H V +F
Sbjct: 130 FRAHTATVRSVHFCS-DGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDG 188
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ + ++K+W+ + H +T VDFHP G + + +D+ +K+WD+R
Sbjct: 189 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVR 248
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ Y+ HS ++N++ F P G ++ + D ++I
Sbjct: 249 THRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKI 286
Score = 200 (75.5 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 51/190 (26%), Positives = 83/190 (43%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
+A F H +V C+ SG +LA+G DK V +W H+ V SV F
Sbjct: 84 RAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHF 142
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ ++ +IK+W+ +L+ H + + F P G + S S D +KL
Sbjct: 143 CSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKL 202
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-GASFH--LTNTSIH--V 181
WD + C+++Y H + + F P G +A+ G D V++ H L + +H
Sbjct: 203 WDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAA 262
Query: 182 VDLSLVHPLG 191
V+ HP G
Sbjct: 263 VNALSFHPSG 272
Score = 175 (66.7 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 40/158 (25%), Positives = 70/158 (44%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H +V C+ Q LA+G D + +W + + +GH V V F
Sbjct: 46 FKGHRDAVTCVDFSFNMKQ-LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSG 104
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L++G + +++IW + H +++ SV F G + S D IK+W
Sbjct: 105 HLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTH 164
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
R+ +++ H + +FSPDG+ I S +D V++
Sbjct: 165 RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKL 202
Score = 162 (62.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P+++R GH+ ++T VDF L SGS+DS + +W ++ + Y + GH ++ +
Sbjct: 40 PSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVN 99
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSP G +ASG D VRI
Sbjct: 100 FSPSGHLLASGSRDKTVRI 118
Score = 61 (26.5 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKV 347
++ D TV WD+ L+ + +S+ + L+F G L+ ++ LK+
Sbjct: 235 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKI 286
Score = 56 (24.8 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
L S+S D+TV WD V + ++ + + F G C+ + +KV+
Sbjct: 190 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVW 245
Score = 53 (23.7 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
L T+SS D T+ DL + L+ T + + FS GE GG E + V+
Sbjct: 275 LVTASS-DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 49 (22.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 10/53 (18%), Positives = 27/53 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVY 348
++S D+T+ W + + + ++ + +R FS G ++ D + +K++
Sbjct: 151 TASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 203
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 210 (79.0 bits), Expect = 7.8e-16, Sum P(3) = 7.8e-16
Identities = 46/142 (32%), Positives = 74/142 (52%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEETLSAGCQSG-SIKIWNL 87
++A+ +D + +W +L GH+ V + G++ +S C S SIK+W+
Sbjct: 120 IMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVS--CSSDLSIKLWDF 177
Query: 88 AVP-TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
++L GH+ +++SV F P GD++ S S D IK WD+ C+YT+RGH+ +
Sbjct: 178 GQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVR 237
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
IR S DG AS D V +
Sbjct: 238 MIRISNDGTLFASASLDQTVTV 259
Score = 176 (67.0 bits), Expect = 7.3e-12, Sum P(3) = 7.3e-12
Identities = 36/116 (31%), Positives = 61/116 (52%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGC-QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
L+GH P+ V F + T+ A C + +IK+W+ ++RTL GH ++ + G
Sbjct: 102 LTGHRLPITRVIF-HPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAG 160
Query: 113 DYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
L S S D IKLWD + C+ + +GH +++S+ F P G ++ S D ++
Sbjct: 161 KQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIK 216
Score = 168 (64.2 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 40/142 (28%), Positives = 66/142 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVESVQF-GNGEE 71
H +VN +A+ +G+ L + D + LW G++ +C+ SL GH V SV F G+
Sbjct: 147 HTDAVNDIAIDA-AGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDF 205
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
LSA + +IK W+++ T GH + + G S SLD + +W
Sbjct: 206 VLSAS-RDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFAT 264
Query: 132 KGCIYTYRGHSKSINSIRFSPD 153
K R H ++ + ++PD
Sbjct: 265 KSAKLVLRDHEHAVECVEWAPD 286
Score = 163 (62.4 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 41/168 (24%), Positives = 73/168 (43%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF---- 66
F H V + + G + A+ D+ V +W+ + + L H VE V++
Sbjct: 229 FRGHNDWVRMIRISN-DGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDT 287
Query: 67 -----------GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115
GN L +G + SIK WN+ V TL H++ + + FHP G YL
Sbjct: 288 AYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYL 347
Query: 116 CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED 163
S + D +++W+L + C+ H ++++ F ++ +G D
Sbjct: 348 ISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVD 395
Score = 140 (54.3 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 31/157 (19%), Positives = 66/157 (42%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+G + + D + W + C+ + GH+ V ++ N ++ ++ +W+
Sbjct: 202 TGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWS 261
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDY---------------LCSGSLDSFIKLWDLRR 131
A + + L H+ ++ V++ P Y L SGS D IK W++
Sbjct: 262 FATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINT 321
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++T H + + F P G+++ S +D +R+
Sbjct: 322 GDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRV 358
Score = 128 (50.1 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 22/104 (21%), Positives = 50/104 (48%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
S +L +G D+ + W + + + +L H V + F + L + ++++W
Sbjct: 301 STHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWE 360
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L+ + + H+ +++V FH ++ +GS+D K+W+ R
Sbjct: 361 LSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
Score = 117 (46.2 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 27/84 (32%), Positives = 41/84 (48%)
Query: 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS 144
W P Q+ L GH+ IT V FHP + S S D+ IK+WD T +GH+ +
Sbjct: 92 WIPRPPETQK-LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDA 150
Query: 145 INSIRFSPDGQWIASGGEDGVVRI 168
+N I G+ + S D +++
Sbjct: 151 VNDIAIDAAGKQLVSCSSDLSIKL 174
Score = 65 (27.9 bits), Expect = 7.8e-16, Sum P(3) = 7.8e-16
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGWEPARQ 355
S S DR++ W++ ++ T + + +R L F G+ L+ D + L+V WE + Q
Sbjct: 307 SGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRV--WELSAQ 364
Score = 56 (24.8 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG 334
+S++ LP F+L S+S D T+ WD+ V T ++ +R + S G
Sbjct: 195 SSVTFLPTGD---FVL--SASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDG 245
Score = 44 (20.5 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 12/56 (21%), Positives = 24/56 (42%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-GLKVYGWE 351
S + D+T+ W+L + E + + + F + ++ G + KV WE
Sbjct: 349 SVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKV--WE 402
Score = 37 (18.1 bits), Expect = 7.8e-16, Sum P(3) = 7.8e-16
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 659 SPSYSTGSVDMA 670
SP TGSVDM+
Sbjct: 386 SPFVITGSVDMS 397
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 224 (83.9 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
V C A G+++ + DDK V LW C+ S H V V F ++A
Sbjct: 148 VRC-AKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAG 206
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
++K+W++ + + H +++ ++ FHP G+YL + S DS +K+ DL +YT
Sbjct: 207 MDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYT 266
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQY 197
GH ++ FS G++ ASGG D V + S + +VD V + PP
Sbjct: 267 LHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS------NFDIVDYGEVLRVQRPPATR 320
Query: 198 TSS 200
SS
Sbjct: 321 ASS 323
Score = 219 (82.2 bits), Expect = 8.8e-16, Sum P(2) = 8.8e-16
Identities = 43/158 (27%), Positives = 76/158 (48%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F AH A+V + GQ T DDK V +W+ + + SLS H V +F
Sbjct: 99 FRAHTATVRSVHFCS-DGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDG 157
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ + ++K+W+ + H +T VDFHP G + + +D+ +K+WD+R
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ Y+ HS ++N++ F P G ++ + D ++I
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKI 255
Score = 201 (75.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 51/190 (26%), Positives = 83/190 (43%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
+A F H +V C+ SG +LA+G DK V +W H+ V SV F
Sbjct: 53 RAYRFAGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHF 111
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ ++ ++K+W+ +L+ H + + F P G + S S D +KL
Sbjct: 112 CSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKL 171
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-GASFH--LTNTSIH--V 181
WD + C+++Y H + + F P G IA+ G D V++ H L + +H
Sbjct: 172 WDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAA 231
Query: 182 VDLSLVHPLG 191
V+ HP G
Sbjct: 232 VNALSFHPSG 241
Score = 183 (69.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 35/113 (30%), Positives = 57/113 (50%)
Query: 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115
GH V SV F + L++G + +W++ T GHK ++T V+F P G L
Sbjct: 17 GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 116 CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
SGS D +++W KG +R H+ ++ S+ F DGQ + +D V++
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKV 129
Score = 167 (63.8 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P+++R GH+ ++TSVDF L SGS+DS + +W ++ + Y + GH ++ +
Sbjct: 9 PSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVN 68
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSP G +ASG D VRI
Sbjct: 69 FSPSGHLLASGSRDKTVRI 87
Score = 61 (26.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKV 347
++ D TV WD+ L+ + +S+ + L+F G L+ ++ LK+
Sbjct: 204 AAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKI 255
Score = 57 (25.1 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
L S+S D+TV WD V + ++ + + F G C+ + +KV+
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 53 (23.7 bits), Expect = 8.8e-16, Sum P(2) = 8.8e-16
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
L T+SS D T+ DL + L+ T + + FS GE GG E + V+
Sbjct: 244 LVTASS-DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 50 (22.7 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 11/53 (20%), Positives = 27/53 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVY 348
++S D+TV W + + + ++ + +R FS G ++ D + +K++
Sbjct: 120 TASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 202 (76.2 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 47/159 (29%), Positives = 75/159 (47%)
Query: 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG 69
+F H ++ L SG+ +A+G D V +W + + +GH V VQF
Sbjct: 13 NFKGHRDAITSLDFSP-SGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPS 71
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
L++ + ++++W +V H S+ SV F G L + S D IKLW +
Sbjct: 72 AHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSV 131
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
R+ I T R H+ + RFSPDGQ + S +D V++
Sbjct: 132 HRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKL 170
Score = 199 (75.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 40/158 (25%), Positives = 76/158 (48%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F AH SV + GQ L T DD+ + LW++ + I +L H+ V +F
Sbjct: 98 FRAHTGSVRSVCFSA-DGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDG 156
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ + + ++K+W+ + + T + VDFHP + + S D+ +++WD+R
Sbjct: 157 QLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIR 216
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ Y+ HS ++N++ F P G + + D ++I
Sbjct: 217 THTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKI 254
Score = 189 (71.6 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 41/155 (26%), Positives = 70/155 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C A GQ++ + DD+ V LW I + V F +
Sbjct: 143 HNNWVRC-ARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCI 201
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ ++++W++ T+ + H +++ ++ FHP G++L + S DS +K+ DL
Sbjct: 202 ATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGR 261
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+YT GH S + + FS G AS G D V +
Sbjct: 262 LLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMV 296
Score = 175 (66.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
PT++R GH+ +ITS+DF P G + SGS+D+ + +W+++ + Y + GH ++ ++
Sbjct: 8 PTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQ 67
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSP +AS D VR+
Sbjct: 68 FSPSAHLLASSSRDKTVRL 86
Score = 150 (57.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 70/300 (23%), Positives = 120/300 (40%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+ GH + S+ F + +++G S+ +WN+ + GHK ++T V F P
Sbjct: 13 NFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSA 72
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172
L S S D ++LW KG +R H+ S+ S+ FS DGQ + + +D +++
Sbjct: 73 HLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLW--- 129
Query: 173 HLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEE 232
S+H ++ L HN +R + + P G ++ V+ ++
Sbjct: 130 -----SVH--RQKIICTLR------------EHNNWVRCA--RFSPDG---QLMVSVSDD 165
Query: 233 NAESEDQAGEEELFATIANPCDYSAIFQPHRSLN-----RSGTCVPVSVSRT-------- 279
A +L T P YS+ H S S V V RT
Sbjct: 166 RTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQ 225
Query: 280 ----SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE 335
+++ L P +LT SS D T+ DL + L+ T + + ++FS G+
Sbjct: 226 VHSAAVNALSFHPSGNHLLTASS--DSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGD 283
Score = 72 (30.4 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKV 347
++S+D TV WD+ +L+ + +S+ + L+F G LL ++ LK+
Sbjct: 203 TASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKI 254
Score = 63 (27.2 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 17/83 (20%), Positives = 41/83 (49%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGWEPA-R 354
++S D+++ W + + ++ T ++++ +R FS G+ ++ D +K+ W+ + R
Sbjct: 119 TASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKL--WDASSR 176
Query: 355 QYD---AQPMGWGKVQDLAVTGT 374
Q +P G+ D + T
Sbjct: 177 QLIHTFCEPGGYSSYVDFHPSST 199
Score = 53 (23.7 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 15/58 (25%), Positives = 22/58 (37%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
L S S DRTV WD L+ T + + F C+ ++ V W+
Sbjct: 158 LMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNT-VRVWD 214
>UNIPROTKB|H3BTV8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0030424 GO:GO:0043025 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000566785 Bgee:H3BTV8 Uniprot:H3BTV8
Length = 79
Score = 208 (78.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 37/67 (55%), Positives = 53/67 (79%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K ++ +AH ++V+ L LGK SG++LATGGDD +VNLW++ K NCIMSL+GH++PVESV+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 67 GNGEETL 73
EE +
Sbjct: 72 NTPEELI 78
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 204 (76.9 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 47/157 (29%), Positives = 80/157 (50%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLA 88
++ + +D + +W SL GH+ V+ V F + + L A C + SIK+W+
Sbjct: 122 LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAF-DAQGKLLASCSADLSIKLWDFQ 180
Query: 89 VP-TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+T++GH +++SV F P GDY+ S S D IK+W++ C+ TY GH + +
Sbjct: 181 QSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRM 240
Query: 148 IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDL 184
+R +G A+ D +R+ LTN+ V+L
Sbjct: 241 VRVHIEGSIFATCSNDQTIRVW----LTNSKDCKVEL 273
Score = 193 (73.0 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 36/107 (33%), Positives = 58/107 (54%)
Query: 24 GKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIK 83
G G LA+G DK + +W + C+++LSGH V + F G + L + +I+
Sbjct: 305 GHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIR 364
Query: 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+W+L +TL H+ TS+DFH Y+ SGS+D +K+W+ R
Sbjct: 365 VWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 179 (68.1 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 37/117 (31%), Positives = 59/117 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
SL+GH + V F + + + +I+IW+ +R+L GH S+ V F G
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 113 DYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD ++ CI T GH +++S+ F P G ++ S D +++
Sbjct: 163 KLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKM 219
Score = 174 (66.3 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
L++G + +I+IW+++V TL+GH + + + FHP G YL S S D I++WDLR K
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNK 371
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T H SI F ++ SG D V++
Sbjct: 372 RCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKV 407
Score = 166 (63.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 44/150 (29%), Positives = 69/150 (46%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVESV 64
E H SV +A + G++LA+ D + LW +S CI ++ GH V SV
Sbjct: 141 EYERSLKGHTDSVQDVAFDAQ-GKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSV 199
Query: 65 QF-GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
F G+ LSA + +IK+W +A +T GH+ + V H G + S D
Sbjct: 200 AFVPAGDYVLSAS-RDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQT 258
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153
I++W K C R H ++ I ++P+
Sbjct: 259 IRVWLTNSKDCKVELRDHEHTVECIAWAPE 288
Score = 123 (48.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P + +L GH++SIT V FHP + S S D+ I++WD + +GH+ S+ +
Sbjct: 98 PPEKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVA 157
Query: 150 FSPDGQWIASGGEDGVVRI 168
F G+ +AS D +++
Sbjct: 158 FDAQGKLLASCSADLSIKL 176
Score = 120 (47.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 109 HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
H G +L SGS D I++WD+ C+ T GH + + F P G+++ S +D +R+
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRV 365
Score = 69 (29.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVY 348
S S D+T+ WD+ + T + + +R L F GG+ L+ D + ++V+
Sbjct: 314 SGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
Score = 52 (23.4 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWE 351
S+S D+T+ WDL + T + + F + ++ G + +KV WE
Sbjct: 356 SASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKV--WE 409
Score = 43 (20.2 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326
S+S DRT+ W++ V T + +R
Sbjct: 210 SASRDRTIKMWEVATGYCVKTYTGHREWVR 239
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 210 (79.0 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 51/162 (31%), Positives = 72/162 (44%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
+A ++ H V L + G +LA+ DK V LW L + H+ PV SV F
Sbjct: 52 RAYRYVGHKDVVTSLQFSPQ-GNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDF 110
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ L + SIK+W++ +L H + F P G + S S D IK+
Sbjct: 111 SADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD K C+ + N + FSP+G IAS G D VRI
Sbjct: 171 WDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRI 212
Score = 208 (78.3 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 59/214 (27%), Positives = 99/214 (46%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K+ +F AH A V + GQ L T +DK + +W++ + + SL H+ V +F
Sbjct: 94 KSSEFKAHTAPVRSVDFSA-DGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKF 152
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVDFHPYGDYLCSGSLDSF 123
+ + + +IKIW+ T ++ +N S+ VDF P G + S D
Sbjct: 153 SPDGRLIVSCSEDKTIKIWDT---TSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHA 209
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVD 183
+++WD+R + Y+ HS +N + F P G + + DG V+I + +V+
Sbjct: 210 VRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKI----------LDLVE 259
Query: 184 LSLVHPL-GTPPPQYTSSVPFSHNTSLRKSFTKG 216
L++ L G P +T V FS + L FT G
Sbjct: 260 GRLIYTLQGHTGPVFT--VSFSKDGEL---FTSG 288
Score = 191 (72.3 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 44/156 (28%), Positives = 74/156 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEET 72
H V C A G+++ + +DK + +W C+ + S V F NG
Sbjct: 143 HTHWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCI 201
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
SAG +++IW++ + + + H + + FHP G+ L + S D +K+ DL
Sbjct: 202 ASAGSDH-AVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEG 260
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
IYT +GH+ + ++ FS DG+ SGG D V +
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLV 296
Score = 185 (70.2 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 44/158 (27%), Positives = 72/158 (45%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A++ Q+ AT D + LW+L GH V S+QF
Sbjct: 14 FKGHKAAITSADFSPNCKQI-ATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQG 72
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L++ + ++++W L H + + SVDF G +L + S D IK+W +
Sbjct: 73 NLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMY 132
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
R+ +Y+ H+ + +FSPDG+ I S ED ++I
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Score = 172 (65.6 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 33/117 (28%), Positives = 58/117 (49%)
Query: 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115
GH + S F + ++ + +W+L GHK +TS+ F P G+ L
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 116 CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172
S S D ++LW L RKG ++ H+ + S+ FS DGQ++ + ED +++ + +
Sbjct: 76 ASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMY 132
Score = 167 (63.8 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P ++R GHK++ITS DF P + + S D+F+ LW L+ Y Y GH + S++
Sbjct: 8 PILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQ 67
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSP G +AS D VR+
Sbjct: 68 FSPQGNLLASASRDKTVRL 86
Score = 121 (47.7 bits), Expect = 0.00069, P = 0.00069
Identities = 26/101 (25%), Positives = 45/101 (44%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+G +A+ G D V +W + + + HS V + F +L G++KI +
Sbjct: 197 NGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILD 256
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
L + TL GH + +V F G+ SG D+ + +W
Sbjct: 257 LVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 65 (27.9 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350
L T+SS D TV DL + L+ T + ++ + ++FS+ GE G + +V W
Sbjct: 243 LVTASS-DGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADA-QVLVW 297
Score = 59 (25.8 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
S+ +D V WD+ L+ + +S + L+F G L+ ++G
Sbjct: 203 SAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDG 250
Score = 59 (25.8 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
L S S D+T+ WD V+ + + FS G C+ G ++++
Sbjct: 158 LIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIW 213
Score = 49 (22.3 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 14/86 (16%), Positives = 40/86 (46%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGW 350
F++T S D+++ W + + + + +++ +R FS G ++ + + +K++
Sbjct: 116 FLVTASE--DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 351 EPARQYD--AQPMGWGKVQDLAVTGT 374
+ + + +G+ D + GT
Sbjct: 174 TSKQCVNNFSDSVGFANFVDFSPNGT 199
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 207 (77.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 47/165 (28%), Positives = 80/165 (48%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K +F AH A V + GQ LAT +DK + +W++ + + SL H+ V +F
Sbjct: 94 KFSEFKAHTAPVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKF 152
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVDFHPYGDYLCSGSLDSF 123
+ + + +IKIW+ T ++ +N S+ VDF+P G + S D
Sbjct: 153 SPDGRLIVSCSEDKTIKIWDT---TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQT 209
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+K+WD+R + Y+ HS +N I F P ++ + DG ++I
Sbjct: 210 VKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKI 254
Score = 194 (73.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 43/141 (30%), Positives = 63/141 (44%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G +LA+ D+ V LW K H+ PV SV F + L+ + SIK+W++
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+L H + F P G + S S D IK+WD K C+ + N
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ F+P G IAS G D V++
Sbjct: 192 VDFNPSGTCIASAGSDQTVKV 212
Score = 190 (71.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 43/151 (28%), Positives = 72/151 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEET 72
H V C A G+++ + +DK + +W C+ + S V F +G
Sbjct: 143 HTHWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCI 201
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
SAG ++K+W++ V + + H + + FHP +YL + S D +K+ DL
Sbjct: 202 ASAGSDQ-TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEG 260
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGED 163
IYT +GH+ + ++ FS G+ ASGG D
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKGGELFASGGAD 291
Score = 187 (70.9 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 47/161 (29%), Positives = 77/161 (47%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A++ L L +G+ LAT D + LW GH V SVQF
Sbjct: 14 FKGHKAAITSLDLSP-NGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHG 72
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLN---GHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
L++ + ++++W +P + + H + + SVDF G +L + S D IK+W
Sbjct: 73 NLLASASRDRTVRLW---IPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ R+ +Y+ H+ + +FSPDG+ I S ED ++I
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Score = 173 (66.0 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 34/118 (28%), Positives = 62/118 (52%)
Query: 56 GHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDY 114
GH + S+ NG++ +A + + +WN GHK +TSV F P+G+
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDT-FLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNL 74
Query: 115 LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172
L S S D ++LW ++G ++ H+ + S+ FS DGQ++A+ ED +++ + +
Sbjct: 75 LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMY 132
Score = 171 (65.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 31/79 (39%), Positives = 46/79 (58%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P ++R GHK++ITS+D P G L + S D+F+ LW+ + Y Y GH + S++
Sbjct: 8 PVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQ 67
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSP G +AS D VR+
Sbjct: 68 FSPHGNLLASASRDRTVRL 86
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 28/101 (27%), Positives = 46/101 (45%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
SG +A+ G D+ V +W + + + HS V + F + L G++KI +
Sbjct: 197 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILD 256
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
L + TL GH + +V F G+ SG D+ + LW
Sbjct: 257 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 67 (28.6 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG--DTEGL 345
L T+SS D T+ DL + L+ T + ++ + ++FS+GGE G DT+ L
Sbjct: 243 LVTASS-DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Score = 60 (26.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
L S S D+T+ WD V+ + + F+ G C+ G + +KV+
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 213
Score = 57 (25.1 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKV 347
S+ +D+TV WD+ L+ + +S + ++F L+ ++G LK+
Sbjct: 203 SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKI 254
Score = 45 (20.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 8/53 (15%), Positives = 28/53 (52%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
++S D+++ W + + + + +++ +R FS G ++ + + +K++
Sbjct: 119 TASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 235 (87.8 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 61/199 (30%), Positives = 94/199 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H VN ++ S ++LA+ DD+ V +W + +L GH+ V SV F + +
Sbjct: 430 HDDCVNSVSFSPDS-RLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLI 488
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++ ++KIW+ A +Q L H + + SV F L S S D +K+WD
Sbjct: 489 ASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGS 548
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTP 193
T GH +NS+ FSPD + +AS +DG V+I + T T H D S G
Sbjct: 549 LENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW--YAATGTVQHTFDGS-----G-- 599
Query: 194 PPQYTSSVPFSHNTSLRKS 212
+ S+ FSH ++L S
Sbjct: 600 --RVAISLAFSHTSNLLAS 616
Score = 220 (82.5 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 48/158 (30%), Positives = 81/158 (51%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H +V ++ S ++LA+ D V +W S +L GH+ V+SV F +
Sbjct: 259 FKGHDRAVGSVSFSHDS-RLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDS 317
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L++ G++KIW+ A T+QR L GH S+ SV F + SGS D +++W+
Sbjct: 318 RLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETT 377
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+T+ H S+ ++ F+ D + +AS + G V+I
Sbjct: 378 TGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKI 415
Score = 205 (77.2 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 45/155 (29%), Positives = 72/155 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H SV + S +++A+G +D+ V +W + H V +V F + L
Sbjct: 346 HNDSVRSVVFSHDS-RLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRL 404
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++ G++KIW+ ++Q L GH + SV F P L S S D +K+W
Sbjct: 405 ASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGS 464
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
T GH+ + S+ FS D + IAS +D V+I
Sbjct: 465 LQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKI 499
Score = 189 (71.6 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 51/169 (30%), Positives = 75/169 (44%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H SV ++ S + LA+ D V +W + L GH V SV F
Sbjct: 385 FEDHEDSVMAVSFAHDSRR-LASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDS 443
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L++ ++KIW+ A ++QRTL GH + SV F + S S D +K+WD
Sbjct: 444 RLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTA 503
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG--ASFHLTNT 177
H + S+ FS D + +AS +D V+I A+ L NT
Sbjct: 504 TVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENT 552
Score = 185 (70.2 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 41/140 (29%), Positives = 66/140 (47%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88
+++A+ DD V +W +L H V SV F + L++ ++KIW+ A
Sbjct: 486 RLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTA 545
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
+++ TL GH + SV F P L S S D +K+W +T+ G + S+
Sbjct: 546 TGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISL 605
Query: 149 RFSPDGQWIASGGEDGVVRI 168
FS +AS +DG V+I
Sbjct: 606 AFSHTSNLLASAMDDGTVKI 625
Score = 154 (59.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 38/136 (27%), Positives = 59/136 (43%)
Query: 3 AKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVE 62
A V + +H V + S ++LA+ DD V +W + +L GH V
Sbjct: 503 ATVPLQNNLESHDNWVRSVVFSHDS-RLLASASDDMTVKIWDTATGSLENTLEGHDDRVN 561
Query: 63 SVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS 122
SV F L++ G++KIW A TVQ T +G S+ F + L S D
Sbjct: 562 SVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDG 621
Query: 123 FIKLWDLRRKGCIYTY 138
+K+WD+ +T+
Sbjct: 622 TVKIWDMEIYSLRHTF 637
Score = 121 (47.7 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 27/94 (28%), Positives = 46/94 (48%)
Query: 75 AGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC 134
+G + ++++ A+ GH ++ SV F L S S D +K+WD
Sbjct: 238 SGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFL 297
Query: 135 IYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
T GH++ + S+ FS D + +AS +DG V+I
Sbjct: 298 QNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKI 331
Score = 77 (32.2 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 280 SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG 339
S+S P S +L S+S DRTV W SL T E ++ +R + FS L+
Sbjct: 436 SVSFSPDSRLLA-----SASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSR-LIA 489
Query: 340 GDTEGLKVYGWEPA 353
++ + V W+ A
Sbjct: 490 SASDDMTVKIWDTA 503
Score = 74 (31.1 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S+S D TV WD L + E + + +R + FS LL ++ + V W+ A
Sbjct: 487 LIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSR-LLASASDDMTVKIWDTA 545
Score = 72 (30.4 bits), Expect = 4.5e-15, Sum P(3) = 4.5e-15
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
L S+S D TV WD SL +T E + + ++FS L +G +K++
Sbjct: 529 LLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 63 (27.2 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
L S+S D TV WD +L + ++ ++R + FS + G + V WE
Sbjct: 319 LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRT-VRIWE 375
Score = 60 (26.2 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL 338
L S+ D TV WD+E +SL T + + I+R+ F + L+
Sbjct: 613 LLASAMDDGTVKIWDMEIYSLRHTFDLDHE-IQRIQFDKSMSSLI 656
Score = 49 (22.3 bits), Expect = 9.9e-13, Sum P(3) = 9.9e-13
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVYGWEPA 353
S+S V WD SL + E + + ++FS L D +K+ W A
Sbjct: 406 SASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKI--WHAA 461
Score = 44 (20.5 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 393 TLDSYSAGSPVSTMGRERDQIV 414
+LD Y + ST R+RDQ+V
Sbjct: 1375 SLDQYYYHALESTKDRDRDQLV 1396
Score = 39 (18.8 bits), Expect = 4.5e-15, Sum P(3) = 4.5e-15
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 696 GQEK-PSVDFEVPTKESEIYPTYVR-KGPDMYGPQS 729
G EK P F P + EI V+ K DM+GP+S
Sbjct: 1237 GAEKSPHARFMRPVCQ-EIGSWSVQSKQTDMHGPES 1271
Score = 39 (18.8 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 207 TSLRKSFTKGRPGGTKAKIDVTRIEENA-ESEDQAGE-EELFATIANPC 253
TS + ++KG+ + +D T + EN + Q E +L +I C
Sbjct: 1429 TSFPERWSKGKGKEVPSALDTTDVLENIIQDRSQIKEPHQLAESIICKC 1477
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 224 (83.9 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 46/155 (29%), Positives = 79/155 (50%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H SV C+++ + +AT D + +W+ +L GH + V++ G + L
Sbjct: 53 HEKSVTCVSVSPNK-RWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYL 111
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++ +I+IW+ R L GH + ++S+DF+P G L SGS D +++W+L+
Sbjct: 112 ASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGT 171
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ HS+ I S+ S DG A+ DG+ RI
Sbjct: 172 CLRMLPAHSEPIISVSISADGTLCATASYDGMARI 206
Score = 170 (64.9 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 37/116 (31%), Positives = 58/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+L GH V V + ++ G+IKIW+ ++ TL GH I+ V +
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGS 108
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
YL S S D I++WD ++ + +GH+ ++SI F+P G + SG D VRI
Sbjct: 109 KYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRI 164
Score = 155 (59.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 35/139 (25%), Positives = 64/139 (46%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
LA+ DDK + +W K + L GH+ V S+ F L +G +++IWNL
Sbjct: 111 LASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDG 170
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY-RGHSKSINSIR 149
T R L H I SV G + S D ++WD+ C+ T + +++++
Sbjct: 171 TCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQ 230
Query: 150 FSPDGQWIASGGEDGVVRI 168
F+ + +++ + +R+
Sbjct: 231 FTENRKYLLVSNLNSQIRL 249
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQ-SGSIKIWN 86
G +L +G D+ V +W L C+ L HS P+ SV + + TL A G +IW+
Sbjct: 150 GTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSI-SADGTLCATASYDGMARIWD 208
Query: 87 LAVPTVQRTL-NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGH 141
+ +TL ++++ F YL +L+S I+LWD RR + + H
Sbjct: 209 VLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSH 264
Score = 49 (22.3 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL 345
L S S D TV W+L+ + + +S I ++ S G +G+
Sbjct: 152 LLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGM 203
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 217 (81.4 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 49/156 (31%), Positives = 77/156 (49%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN--GE 70
AH + +AL K SG TG D+ LW + +L GH V ++ F N G+
Sbjct: 90 AHILPLTNVALNK-SGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGD 148
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ ++ G + K+W++ T GH + I + F+P + +GS+D+ KLWD++
Sbjct: 149 K-IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
+YT RGHS I S+ F+ G I +G D V
Sbjct: 208 NGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTV 243
Score = 202 (76.2 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 46/158 (29%), Positives = 71/158 (44%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A + CL+ +S ++ATG D LW + + +L GHS + S+ F
Sbjct: 173 FRGHTAEIVCLSFNPQS-TLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSG 231
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ + G ++ +W+ L GH + I+S F+ + +GS+D KLWD
Sbjct: 232 DRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDAT 291
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T GH I F G+ IA+ DG RI
Sbjct: 292 NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARI 329
Score = 201 (75.8 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K + H A ++ + +L TG DK LW C+ +L+GH + F
Sbjct: 253 KVNILIGHCAEISSASFNWDCSLIL-TGSMDKTCKLWDATNGKCVATLTGHDDEILDSCF 311
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ ++ G+ +I++ A L GH+ I+ + F+P G++L +GS D ++
Sbjct: 312 DYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARI 371
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD + C+ GH+ I S F+ G + +G +D RI
Sbjct: 372 WDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRI 413
Score = 191 (72.3 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 47/167 (28%), Positives = 74/167 (44%)
Query: 3 AKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVE 62
A E+ H V +A G +ATG DK LW++ C + GH+ +
Sbjct: 122 ASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIV 181
Query: 63 SVQFGNGEETLSA-GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD 121
+ F N + TL A G + K+W++ TL GH + I S+ F+ GD + +GS D
Sbjct: 182 CLSF-NPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFD 240
Query: 122 SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ +WD + GH I+S F+ D I +G D ++
Sbjct: 241 HTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKL 287
Score = 163 (62.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 41/163 (25%), Positives = 62/163 (38%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E+ H A + L+ SG + TG D V +W + L GH + S
Sbjct: 210 EEVYTLRGHSAEIISLSFNT-SGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSAS 268
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F + G + K+W+ TL GH I F G + + S D +
Sbjct: 269 FNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTAR 328
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++ + CI GH I+ I F+P G + +G D RI
Sbjct: 329 IFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARI 371
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+G+++AT D +++ CI L GH + + F L G + +IW+
Sbjct: 314 TGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWD 373
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ L GH I S F+ G+ + +GS D+ ++W
Sbjct: 374 AQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 53 (23.7 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L ++SAD T + ++ E + I +++F+ G LL G ++ + A
Sbjct: 317 LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSD-------KTA 369
Query: 354 RQYDAQ 359
R +DAQ
Sbjct: 370 RIWDAQ 375
Score = 52 (23.4 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
L T SS D+T WD + + E ++ I F+ G ++ G +
Sbjct: 360 LLTGSS-DKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKD 408
Score = 50 (22.7 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 13/54 (24%), Positives = 21/54 (38%)
Query: 291 CFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
C ++ T S D+T WD V+T + I F G+ + +G
Sbjct: 273 CSLILTGSM-DKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADG 325
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 207 (77.9 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 54/190 (28%), Positives = 84/190 (44%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
+A ++ H V L + G +LA+ D+ V LW L + H+ PV SV F
Sbjct: 52 RAYRYVGHKDVVTSLQFSPQ-GNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDF 110
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ L + SIK+W++ +L H + F P G + S S D IK+
Sbjct: 111 SADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG---ASFHLTNTSIHVVD 183
WD K C+ + N + F+P+G IAS G D V+I + L + +H
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCG 230
Query: 184 LSLV--HPLG 191
++ + HPLG
Sbjct: 231 VNCLSFHPLG 240
Score = 206 (77.6 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 46/165 (27%), Positives = 81/165 (49%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K+ +F AH A V + GQ+L T +DK + +W++ + + SL H+ V +F
Sbjct: 94 KSSEFKAHTAPVRSVDFSA-DGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKF 152
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVDFHPYGDYLCSGSLDSF 123
+ + + +IKIW+ T ++ +N S+ VDF+P G + S D
Sbjct: 153 SPDGRLIVSCSEDKTIKIWDT---TNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHA 209
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+K+WD+R + Y+ HS +N + F P G + + DG V++
Sbjct: 210 VKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKM 254
Score = 198 (74.8 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 46/156 (29%), Positives = 75/156 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEET 72
H V C A G+++ + +DK + +W C+ + S V F NG
Sbjct: 143 HTHWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCI 201
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
SAG ++KIW++ + + + H + + FHP G+ L + S D +K+ DL
Sbjct: 202 ASAGSDH-AVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEG 260
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
IYT +GH+ + ++ FS DG+ + SGG D V I
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLI 296
Score = 180 (68.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 44/158 (27%), Positives = 71/158 (44%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A++ Q+ AT D + LW+L GH V S+QF
Sbjct: 14 FKGHKAAITSADFSPNCKQI-ATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQG 72
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L++ + ++++W L H + + SVDF G L + S D IK+W +
Sbjct: 73 NLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMF 132
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
R+ +Y+ H+ + +FSPDG+ I S ED ++I
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Score = 175 (66.7 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
S GH + S F + ++ + +W+L GHK +TS+ F P G
Sbjct: 13 SFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQG 72
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASF 172
+ L S S D ++LW L RKG ++ H+ + S+ FS DGQ + + ED +++ + F
Sbjct: 73 NLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMF 132
Score = 170 (64.9 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 31/79 (39%), Positives = 46/79 (58%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P ++R+ GHK++ITS DF P + + S D+F+ LW L+ Y Y GH + S++
Sbjct: 8 PILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQ 67
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSP G +AS D VR+
Sbjct: 68 FSPQGNLLASASRDRTVRL 86
Score = 67 (28.6 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350
L T+SS D TV DL + L+ T + ++ + ++FS+ GE L G + +V W
Sbjct: 243 LVTASS-DGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADA-QVLIW 297
Score = 59 (25.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
L S S D+T+ WD V+ + + F+ G C+ G +K++
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIW 213
Score = 56 (24.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
S+ +D V WD+ L+ + +S + L+F G L+ ++G
Sbjct: 203 SAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDG 250
Score = 47 (21.6 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 9/56 (16%), Positives = 29/56 (51%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
L ++S D+++ W + + + + +++ +R FS G ++ + + +K++
Sbjct: 116 LLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 230 (86.0 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 43/157 (27%), Positives = 78/157 (49%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H +V + + + L +G +DK V LW++ ++S GH+ PV V F
Sbjct: 522 VGHSGTVYSTSFSPDN-KYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGH 580
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
+ + ++W+ R GH + + V FHP G Y+ +GS D ++WD+
Sbjct: 581 YFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVST 640
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ + GH+ + SI PDG+W+++G EDG++ +
Sbjct: 641 GDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINV 677
Score = 173 (66.0 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 40/142 (28%), Positives = 66/142 (46%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G AT D+ LW+ + +GH V+ V F + G + ++W++
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV 638
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS-IN 146
+ R GH + + S+ P G +L +GS D I +WD+ + RGH K+ I
Sbjct: 639 STGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIY 698
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
S+ +S +G + SGG D VR+
Sbjct: 699 SLSYSKEGNVLISGGADHTVRV 720
Score = 166 (63.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 34/122 (27%), Positives = 61/122 (50%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H V+C++ +G + TG DK +W + + + GH+ PV S+
Sbjct: 605 FAGHLNDVDCVSF-HPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDG 663
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGH-KSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
LS G + G I +W++ + + GH K++I S+ + G+ L SG D +++WDL
Sbjct: 664 RWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDL 723
Query: 130 RR 131
++
Sbjct: 724 KK 725
Score = 155 (59.6 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+L GHS V S F + L +G + ++++W++ T + GH + V F P G
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLG 579
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y + S D +LW + + GH ++ + F P+G ++ +G D R+
Sbjct: 580 HYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRM 635
Score = 154 (59.3 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
PT +TL GH ++ S F P YL SGS D ++LW + + +Y+GH+ + +
Sbjct: 516 PTC-KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVS 574
Query: 150 FSPDGQWIASGGEDGVVRIGASFHLTNTSI---HVVDLSLV--HPLG 191
FSP G + A+ D R+ + H+ I H+ D+ V HP G
Sbjct: 575 FSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNG 621
Score = 51 (23.0 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNS 322
S AD TV WDL+K +TTE ++
Sbjct: 711 SGGADHTVRVWDLKK----ATTEPSA 732
Score = 51 (23.0 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 41 NLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
NL S C+ + + + + F + +AG Q IKIW+L
Sbjct: 449 NLQLALPSVCMYTFQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIWSL 495
Score = 39 (18.8 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN 49
F ++CL ++ A G D + +W+L S+
Sbjct: 462 FQNTNKDMSCLDFSDDC-RIAAAGFQDSYIKIWSLDGSS 499
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 220 (82.5 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 54/183 (29%), Positives = 85/183 (46%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
V C A G+++ + DDK V LW CI S H V V F ++A
Sbjct: 148 VRC-AKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAG 206
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
++K+W+ + + H +++ ++ FHP G+YL + S DS +K+ DL +YT
Sbjct: 207 MDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYT 266
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQY 197
GH ++ FS G++ ASGG D V + S + +VD + PPP
Sbjct: 267 LHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS------NFDIVDYGDMKAR-RPPPLT 319
Query: 198 TSS 200
+SS
Sbjct: 320 SSS 322
Score = 216 (81.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 43/158 (27%), Positives = 76/158 (48%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F AH A+V + GQ L T DDK V +W+ + + SL+ H V +F
Sbjct: 99 FRAHTATVRSVHFCS-DGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDG 157
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ + ++K+W+ + H +T VDFHP G + + +D+ +K+WD R
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDAR 217
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ Y+ HS ++N++ F P G ++ + D ++I
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKI 255
Score = 209 (78.6 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 54/190 (28%), Positives = 84/190 (44%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
+A F H +V C+ SG +LA+G DK V +W H+ V SV F
Sbjct: 53 RAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHF 111
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ ++L ++K+W+ +L H + + F P G + S S D +KL
Sbjct: 112 CSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKL 171
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-GASFH--LTNTSIH--V 181
WD + CI++Y H + + F P G IA+ G D V++ A H L + +H
Sbjct: 172 WDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAA 231
Query: 182 VDLSLVHPLG 191
V+ HP G
Sbjct: 232 VNALSFHPSG 241
Score = 180 (68.4 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 34/113 (30%), Positives = 58/113 (51%)
Query: 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115
GH V V F + L++G ++ IW++ + GHK ++T V+F P G L
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 116 CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
SGS D +++W KG +R H+ ++ S+ F DGQ + + +D V++
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKV 129
Score = 170 (64.9 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 66/272 (24%), Positives = 111/272 (40%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P+++R GH+ ++T VDF +L SGS+DS + +W ++ + Y + GH ++ +
Sbjct: 9 PSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVN 68
Query: 150 FSPDGQWIASGGEDGVVRI---GASFHLTNTSIHVVDLSLVH------PLGTPPPQYTSS 200
FSP G +ASG D VRI T H + VH L T T
Sbjct: 69 FSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK 128
Query: 201 VPFSHNTSLRKSFTKGRPGGTKAKIDVT-RIEENAESEDQA---GEEELFATIANPCDYS 256
V +H S T+ AK R+ +A S+D+ ++ I + C++
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSA-SDDKTVKLWDKTSRECIHSYCEHG 187
Query: 257 AIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS 316
F + + SGTC+ ++ D TV WD L+
Sbjct: 188 G-FVTYVDFHPSGTCI-----------------------AAAGMDNTVKVWDARTHRLLQ 223
Query: 317 TTEKNSSTIRRLTFSEGGECLLGGDTEG-LKV 347
+ +S+ + L+F G L+ ++ LK+
Sbjct: 224 HYQLHSAAVNALSFHPSGNYLITASSDSTLKI 255
Score = 53 (23.7 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
+++T SS D T+ DL + L+ T + + FS GE GG E + V+
Sbjct: 243 YLITASS--DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>SGD|S000003105 [details] [associations]
symbol:SEC27 "Essential beta'-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IMP;IPI] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IGI;ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IMP] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003105 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 GO:GO:0043130
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG OrthoDB:EOG48H0BF
GO:GO:0032511 EMBL:U11237 EMBL:X92670 EMBL:Z72659 PIR:B55123
RefSeq:NP_011378.1 PDB:2YNN PDB:2YNO PDB:2YNP PDBsum:2YNN
PDBsum:2YNO PDBsum:2YNP ProteinModelPortal:P41811 SMR:P41811
DIP:DIP-6468N IntAct:P41811 MINT:MINT-428887 STRING:P41811
PaxDb:P41811 PeptideAtlas:P41811 EnsemblFungi:YGL137W GeneID:852740
KEGG:sce:YGL137W CYGD:YGL137w NextBio:972153 Genevestigator:P41811
GermOnline:YGL137W Uniprot:P41811
Length = 889
Score = 228 (85.3 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 61/196 (31%), Positives = 96/196 (48%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI-MSLSGHSTPVESV 64
EK DF AH + +A+ VL+ G DD V LW + + + GH V V
Sbjct: 88 EKVVDFEAHPDYIRSIAVHPTKPYVLS-GSDDLTVKLWNWENNWALEQTFEGHEHFVMCV 146
Query: 65 QFGNGE-ETLSAGCQSGSIKIWNLAVPTVQRTLN-GHKSSITSVDFHPYGD--YLCSGSL 120
F + T ++GC ++K+W+L T TL G + + VD++P D Y+ + S
Sbjct: 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD 206
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-GASFHLTNTSI 179
D IK+WD + K C+ T GH +++ F P I SG EDG ++I +S + ++
Sbjct: 207 DLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266
Query: 180 HV-VDLS---LVHPLG 191
+V ++ S HP G
Sbjct: 267 NVGLERSWCIATHPTG 282
Score = 135 (52.6 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 46/170 (27%), Positives = 70/170 (41%)
Query: 39 KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG 98
+V LW + S+ TPV + +F + + G I+++N
Sbjct: 36 RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA 95
Query: 99 HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI-YTYRGHSKSINSIRFSP-DGQW 156
H I S+ HP Y+ SGS D +KLW+ + T+ GH + + F+P D
Sbjct: 96 HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155
Query: 157 IASGGEDGVVRI---GAS---FHLTNTSIHVVDLSLVHPLGTPPPQYTSS 200
ASG D V++ G S F LT V+ +PL P T+S
Sbjct: 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205
Score = 126 (49.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ T DD + +W +C+ +L GH + V F + +G + G++KIWN +
Sbjct: 201 MITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260
Query: 91 TVQRTLNGHKSSITSVDFHPYG--DYLCSGSLDSFIKL 126
V++TLN + HP G +Y+ SG + F L
Sbjct: 261 KVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVL 298
Score = 119 (46.9 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 29/143 (20%), Positives = 64/143 (44%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ G DD ++ ++ ++ H + S+ + + +G ++K+WN
Sbjct: 70 IIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129
Query: 91 -TVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYR-GHSKSINS 147
+++T GH+ + V F+P SG LD +K+W L + +T G + +N
Sbjct: 130 WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNY 189
Query: 148 IRFSP--DGQWIASGGEDGVVRI 168
+ + P D ++ + +D ++I
Sbjct: 190 VDYYPLPDKPYMITASDDLTIKI 212
Score = 71 (30.1 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 28/112 (25%), Positives = 48/112 (42%)
Query: 284 LPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
LP P +++T S D T+ WD + S V+T E + S + F ++ G +
Sbjct: 195 LPDKP---YMITASD--DLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSED 249
Query: 344 G-LKVYGWEPARQYDAQPMGWGKVQDLAVTGTQLWFRRVGTWSHQDSGFSTL 394
G LK+ W + + + G + + T R+ S D+GF+ L
Sbjct: 250 GTLKI--WNSSTYKVEKTLNVGLERSWCIA-THPTGRKNYIASGFDNGFTVL 298
Score = 54 (24.1 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 14/64 (21%), Positives = 31/64 (48%)
Query: 514 VKVYNALMPVKSVLLKKQTVQGKLGQTFRDLLAEIEGLTEGSLTAKFLSSRNLREKEDRI 573
V VY + ++ + + T++G++ + ++L +EG + A+FL + E+ I
Sbjct: 592 VHVYGYEISLEVLEFQTLTLRGEIEEAIENVLPNVEGKDSLTKIARFLEGQEYYEEALNI 651
Query: 574 GESQ 577
Q
Sbjct: 652 SPDQ 655
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 221 (82.9 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 58/202 (28%), Positives = 100/202 (49%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
++ F HG VN + ++ Q+L +G DD+ + +W K + +L V +V
Sbjct: 131 QRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLES-PFQVTAVC 189
Query: 66 FGN-GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFI 124
FG+ GE+ +S G + +KIW++ V L GH +IT + P GD++ + ++D+ +
Sbjct: 190 FGDTGEQVISGGIDN-EVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTL 248
Query: 125 KLWDLRR----KGCIYTYRGHSKSI--NSIR--FSPDGQWIASGGEDGVVRIG------A 170
++WD+R + C+ ++GH + N +R +SP I SG D V I
Sbjct: 249 RVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRI 308
Query: 171 SFHLT--NTSIHVVDLSLVHPL 190
+ L N S++ VD S PL
Sbjct: 309 LYKLPGHNGSVNAVDFSPKEPL 330
Score = 197 (74.4 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 49/167 (29%), Positives = 79/167 (47%)
Query: 6 EKAEDFMA---HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVE 62
E E+ MA H +V A G + T DK + W + GH V
Sbjct: 86 EDCENVMAMSGHSGAV-MEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVN 144
Query: 63 SVQFGN-GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD 121
SVQ G++ L +G +IKIW+ TL +T+V F G+ + SG +D
Sbjct: 145 SVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLES-PFQVTAVCFGDTGEQVISGGID 203
Query: 122 SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ +K+WD+R++ ++ RGHS +I + SP+G +I + D +R+
Sbjct: 204 NEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRV 250
Score = 183 (69.5 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 44/145 (30%), Positives = 75/145 (51%)
Query: 28 GQVLATGGDDKKVNLWALGKSNC--IMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKI 84
G++L + G D+++ +W + + +C +M++SGHS V F +G + ++
Sbjct: 67 GELLLSSGFDRQIYIWQVYE-DCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDK-TLAF 124
Query: 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRRKGCIYTYRGHSK 143
W++A QR GH + + SV G L CSGS D IK+WD R+K +T +
Sbjct: 125 WDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQ 184
Query: 144 SINSIRFSPDGQWIASGGEDGVVRI 168
+ ++ F G+ + SGG D V+I
Sbjct: 185 -VTAVCFGDTGEQVISGGIDNEVKI 208
Score = 173 (66.0 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 39/160 (24%), Positives = 74/160 (46%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
V + G QV++ GG D +V +W + K + L GHS + + + +
Sbjct: 185 VTAVCFGDTGEQVIS-GGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNA 243
Query: 78 QSGSIKIWNLA--VPTVQ--RTLNGHK----SSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
++++W++ P + + GH+ ++ + P D + SGS D + +WD+
Sbjct: 244 MDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDV 303
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169
+ +Y GH+ S+N++ FSP I SG D + +G
Sbjct: 304 NTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLG 343
Score = 135 (52.6 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 51 IMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDF 108
IM L GH + + +F GE LS+G I IW + ++GH ++ F
Sbjct: 48 IMQLEGHEGEIFTAEFHPEGELLLSSGFDR-QIYIWQVYEDCENVMAMSGHSGAVMEAHF 106
Query: 109 HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWI-ASGGEDGVVR 167
P G ++ + S D + WD+ ++GH +NS++ S GQ + SG +D ++
Sbjct: 107 TPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIK 166
Query: 168 I 168
I
Sbjct: 167 I 167
Score = 123 (48.4 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 29/88 (32%), Positives = 44/88 (50%)
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC--I 135
+SG + NL P +Q L GH+ I + +FHP G+ L S D I +W + + C +
Sbjct: 35 ESGVRRTSNLQAPIMQ--LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVY-EDCENV 91
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGED 163
GHS ++ F+PDG I + D
Sbjct: 92 MAMSGHSGAVMEAHFTPDGSHIFTCSTD 119
Score = 69 (29.3 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S DRT+ WD K T E + + + F + GE ++ G + +V W+
Sbjct: 155 LLCSGSDDRTIKIWDARKKHAAHTLE-SPFQVTAVCFGDTGEQVISGGIDN-EVKIWDIR 212
Query: 354 RQ 355
+Q
Sbjct: 213 KQ 214
Score = 60 (26.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 296 TSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
TS SADR V WD+ ++ ++ ++ + FS +L G ++
Sbjct: 290 TSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSD 337
Score = 60 (26.2 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
S D V WD+ K +++ +S TI ++ S G+ +L + L+V+ P
Sbjct: 199 SGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRP 255
Score = 57 (25.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 299 SADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL--GGDTEGLKVYGWEPARQY 356
S D+T+ FWD+ + + + + + S G+ LL G D +K+ W+ +++
Sbjct: 117 STDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKI--WDARKKH 174
Query: 357 DAQPM 361
A +
Sbjct: 175 AAHTL 179
Score = 50 (22.7 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 19/81 (23%), Positives = 36/81 (44%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFS-------LVSTTEKN-SSTIRRLTF 330
T +S+ P+ FILT ++ D T+ WD+ ++ + + N + R +
Sbjct: 228 TGMSLSPEGD---FILT--NAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAW 282
Query: 331 SEGGECLLGGDTEGLKVYGWE 351
S G + + G + VY W+
Sbjct: 283 SPGSDKITSGSADR-HVYIWD 302
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 218 (81.8 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 47/151 (31%), Positives = 74/151 (49%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
V C A G+++A+ DDK V LW CI S H V+F ++A
Sbjct: 149 VRC-ARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAG 207
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
++K+W++ + + + H +++ S+ FHP G+YL + S DS +K+ DL +YT
Sbjct: 208 TDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYT 267
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
GH + FS G + ASGG D V +
Sbjct: 268 LHGHQGPATCVAFSRTGDFFASGGSDEQVMV 298
Score = 214 (80.4 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 41/158 (25%), Positives = 74/158 (46%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F AH A+V + GQ L T DDK + +W + + + SLS H V +F
Sbjct: 100 FKAHTATVRSVHFSS-DGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDG 158
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+++ ++K+W+ + H V+FHP G + + D +K+WD+R
Sbjct: 159 RLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVR 218
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ Y+ H+ ++NS+ F P G ++ + D ++I
Sbjct: 219 MNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKI 256
Score = 199 (75.1 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 46/162 (28%), Positives = 74/162 (45%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
+A + H +V C+ SG ++A+G DK V LW H+ V SV F
Sbjct: 54 RAYCLVGHKDAVMCVQFSP-SGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHF 112
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ ++L +IK+W + +L+ H + + F P G + S S D +KL
Sbjct: 113 SSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKL 172
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD + CI+++ H N + F P G IA+ G D V++
Sbjct: 173 WDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKV 214
Score = 183 (69.5 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 44/160 (27%), Positives = 76/160 (47%)
Query: 11 FMAHGASVNCL--ALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN 68
F H ++ + +L KK LA+G D + +W++ L GH V VQF
Sbjct: 16 FRGHRDAITSVDFSLNKKQ---LASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSP 72
Query: 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
+++G + ++ +W +V H +++ SV F G L + S D IK+W
Sbjct: 73 SGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWT 132
Query: 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ R+ +++ H + RFSPDG+ IAS +D V++
Sbjct: 133 VHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKL 172
Score = 160 (61.4 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P+++R GH+ +ITSVDF L SGS+DS +K+W ++ + Y GH ++ ++
Sbjct: 10 PSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQ 69
Query: 150 FSPDGQWIASGGEDGVV 166
FSP G +ASG D V
Sbjct: 70 FSPSGHLVASGSRDKTV 86
Score = 139 (54.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 34/122 (27%), Positives = 51/122 (41%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E F HG N + SG +A G DK V +W + + + H+ V S+
Sbjct: 179 ECIHSFCEHGGFANHVEF-HPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLS 237
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F L ++KI +L + TL+GH+ T V F GD+ SG D +
Sbjct: 238 FHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVM 297
Query: 126 LW 127
+W
Sbjct: 298 VW 299
Score = 68 (29.0 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEK-NSSTIRRLTFSEGGECLL-GGDTEGLKVYGWE 351
L S S D+TV W + ST K +++T+R + FS G+ L+ D + +KV W
Sbjct: 76 LVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKV--WT 132
Query: 352 PARQ 355
RQ
Sbjct: 133 VHRQ 136
Score = 59 (25.8 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 12/52 (23%), Positives = 26/52 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKV 347
++ D+TV WD+ L+ + +++ + L+F G L+ + LK+
Sbjct: 205 AAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKI 256
Score = 59 (25.8 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
L S+S D+TV WD + + ++ + F G C+ T+ +KV+
Sbjct: 160 LIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVW 215
Score = 50 (22.7 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
L T+S D+T+ W + + + + ++ + +R FS G L+ ++ V W+
Sbjct: 119 LVTASD-DKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGR-LIASASDDKTVKLWD 174
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 214 (80.4 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 42/156 (26%), Positives = 79/156 (50%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H A+++C+ G +LA+ DK + LW+ + I GHS+ + + + +
Sbjct: 42 HTAAISCVKFSN-DGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYT 100
Query: 74 SAGCQSGSIKIWNLAVP-TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+ +++IW+ P + L GH + + V+F+P + + SGS D I++W+++
Sbjct: 101 CSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTG 160
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ + HS I+S+ F+ DG I S DG +I
Sbjct: 161 KCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKI 196
Score = 167 (63.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 41/160 (25%), Positives = 72/160 (45%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLW-ALGKSNCIMSLSGHSTPVESVQFGNG 69
+ H + ++ LA S + DD + +W A C+ L GH+ V V F
Sbjct: 81 YEGHSSGISDLAWSSDS-HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPP 139
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
+ +G +I+IW + R + H I+SV F+ G + S S D K+WD
Sbjct: 140 SNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDA 199
Query: 130 RRKGCIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ C+ T S +++ +FSP+G++I D +++
Sbjct: 200 KEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKL 239
Score = 158 (60.7 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 32/119 (26%), Positives = 57/119 (47%)
Query: 51 IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP 110
+ +L GH+ + V+F N L++ ++ +W+ ++ GH S I+ + +
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 111 YGDYLCSGSLDSFIKLWDLRRK-GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y CS S D +++WD R C+ RGH+ + + F+P I SG D +RI
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRI 154
Score = 149 (57.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 43/163 (26%), Positives = 74/163 (45%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES-VQFG-NGE 70
AH ++ + + G ++ + D +W + C+ +L +P S +F NG+
Sbjct: 168 AHSMPISSVHFNR-DGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGK 226
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS---ITSVDFHPYGDYLCSGSLDSFIKLW 127
L A S ++K+ N A + GH + ITS G Y+ SGS D+ + LW
Sbjct: 227 FILVATLDS-TLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLW 285
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE--DGVVRI 168
DL+ + + GH+ ++ S+ P I+S G D +RI
Sbjct: 286 DLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRI 328
Score = 137 (53.3 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 34/102 (33%), Positives = 52/102 (50%)
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
N T +AG SG++ I+ P +TL GH ++I+ V F G+ L S S+D + L
Sbjct: 14 NANSTGNAGT-SGNVPIYK---PYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMIL 69
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
W I+ Y GHS I+ + +S D + S +D +RI
Sbjct: 70 WSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRI 111
Score = 58 (25.5 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
L S S D T+ W+++ V + +S I + F+ G ++ +G
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDG 192
Score = 46 (21.3 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTT-EKNSSTIRRLTFSEGGECLL 338
L S+S D + WD ++ + + T + S + FS G+ +L
Sbjct: 184 LIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFIL 229
Score = 43 (20.2 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
S S D V WDL+ +++ E ++ +
Sbjct: 275 SGSEDNCVYLWDLQARNILQRLEGHTDAV 303
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 238 (88.8 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 56/181 (30%), Positives = 96/181 (53%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGK--SNCIMSLSGHSTPVE 62
+EK + F AH + C+ + +L++ DD + LW K SN + GHS V
Sbjct: 90 MEKIKSFEAHADYIRCIIVHPTLPYILSSS-DDMFIKLWDYEKGWSNTQV-FEGHSHYVM 147
Query: 63 SVQFGNGEET--LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSG 118
S+ + N ++T + ++K+W++ P TL GH+ I SV++ G+ YL SG
Sbjct: 148 SIAW-NPKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISG 206
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI--GASFHLTN 176
+ D +K+WD + K C+ T GHS +++ + + P+ I SG EDG V++ +++ L
Sbjct: 207 ADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWHSSTYRLER 266
Query: 177 T 177
T
Sbjct: 267 T 267
Score = 183 (69.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 49/163 (30%), Positives = 75/163 (46%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ-FGNG 69
F H V +A K AT DK V +W++ + +L GH + SV+ F G
Sbjct: 139 FEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGG 198
Query: 70 EET-LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
E+ L +G +KIW+ T +TL GH ++++ V +HP + SGS D +KLW
Sbjct: 199 EKPYLISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWH 258
Query: 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG--VVRIG 169
T + S+ F +I G +DG V++IG
Sbjct: 259 SSTYRLERTLNYGMGFVWSMNFLRGSNFIGLGYDDGTVVLKIG 301
Score = 135 (52.6 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 38/136 (27%), Positives = 60/136 (44%)
Query: 37 DKKVNLWALGKSNCIMSLS-GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT 95
D V +W N + S + PV + +F ++ + G I+++N ++
Sbjct: 36 DGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAKKQWIVTGSDDTYIRVYNYNTMEKIKS 95
Query: 96 LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT--YRGHSKSINSIRFSP- 152
H I + HP Y+ S S D FIKLWD KG T + GHS + SI ++P
Sbjct: 96 FEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYE-KGWSNTQVFEGHSHYVMSIAWNPK 154
Query: 153 DGQWIASGGEDGVVRI 168
D A+ D V++
Sbjct: 155 DTNQFATASLDKTVKV 170
Score = 134 (52.2 bits), Expect = 9.4e-06, Sum P(3) = 9.4e-06
Identities = 35/150 (23%), Positives = 67/150 (44%)
Query: 23 LGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSI 82
+ KK Q + TG DD + ++ I S H+ + + + + I
Sbjct: 67 IAKK--QWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFI 124
Query: 83 KIWNLAVP-TVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
K+W+ + + GH + S+ ++P + + SLD +K+W + +T G
Sbjct: 125 KLWDYEKGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFTLEG 184
Query: 141 HSKSINSIRFSPDGQ--WIASGGEDGVVRI 168
H K INS+ + G+ ++ SG +D +V+I
Sbjct: 185 HEKGINSVEYFSGGEKPYLISGADDKLVKI 214
Score = 61 (26.5 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 25/85 (29%), Positives = 36/85 (42%)
Query: 267 RSGTCVPVSVSRTS-LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
+S TCV ++ +S++ P L IL S S D TV W + L T +
Sbjct: 218 QSKTCVQTLEGHSNNVSVVCYHPELPLIL--SGSEDGTVKLWHSSTYRLERTLNYGMGFV 275
Query: 326 RRLTFSEGGECL-LGGD--TEGLKV 347
+ F G + LG D T LK+
Sbjct: 276 WSMNFLRGSNFIGLGYDDGTVVLKI 300
Score = 57 (25.1 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
S + D+ V WD + + V T E +S+ + + + +L G +G
Sbjct: 205 SGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDG 252
Score = 56 (24.8 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE---CLLGGDTEGLKVYGWE 351
++S D+TV W + T E + I + + GGE + G D + +K++ ++
Sbjct: 161 TASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQ 218
Score = 43 (20.2 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 512 KCVKVYNAL--MPVKSV-LLKKQTVQGKLGQTFRDLLAEIEGLTE 553
K K + +L P S LK T Q L + R+LL EIE +++
Sbjct: 809 KAEKYFESLRSQPKSSFDYLKNATAQS-LSKKQRNLLEEIESVSQ 852
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 207 (77.9 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 42/140 (30%), Positives = 75/140 (53%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLA 88
V+ + +D + +W + +L GH+ V+ + F + + L A C + +IK+W+
Sbjct: 122 VIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLL-ASCSADMTIKLWDFQ 180
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
RT++GH +++SV P GD++ S S D IK+W++ C+ T+ GH + + +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV 240
Query: 149 RFSPDGQWIASGGEDGVVRI 168
R + DG IAS D VR+
Sbjct: 241 RPNQDGTLIASSSNDQTVRV 260
Score = 194 (73.4 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+LSGH +PV V F + + + +IK+W+ +RTL GH S+ + F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTG 162
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD + CI T GH +++S+ P+G I S D +++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKM 218
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 32/105 (30%), Positives = 56/105 (53%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K G L +G DK + +W + C+M+L GH V V G + + + +++IW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIW 365
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ +TL+ H+ +TS+DFH Y+ +GS+D +K+W+ R
Sbjct: 366 DYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 157 (60.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 39/141 (27%), Positives = 67/141 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEET 72
H SV ++ +G++LA+ D + LW CI ++ GH V SV NG+
Sbjct: 149 HTDSVQDISFDH-TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+SA + +IK+W +A +T GH+ + V + G + S S D +++W + K
Sbjct: 208 VSAS-RDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATK 266
Query: 133 GCIYTYRGHSKSINSIRFSPD 153
C R H + I ++P+
Sbjct: 267 ECKAELREHEHVVECISWAPE 287
Score = 150 (57.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 30/111 (27%), Positives = 56/111 (50%)
Query: 58 STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCS 117
+T E+ + G L +G + +IK+W++++ TL GH + + V HP G Y+ S
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVS 355
Query: 118 GSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ D +++WD + K C T H + S+ F ++ +G D V++
Sbjct: 356 CADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 136 (52.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 44/171 (25%), Positives = 76/171 (44%)
Query: 2 RAKVEKA-EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
R ++ +A D++ ++ KK ++ DKK K ++ L
Sbjct: 8 RDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVME 67
Query: 61 VESVQFGNGEETLSAGCQSGSI---KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCS 117
+ES + +E ++ G G K W + P + L+GH+S +T V FHP + S
Sbjct: 68 LES-KLNEAKEEINIGGPIGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVIVS 125
Query: 118 GSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D+ IK+WD T +GH+ S+ I F G+ +AS D +++
Sbjct: 126 ASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKL 176
Score = 70 (29.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S SAD T+ WD + F + T + + + G+ ++ + + WE A
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMWEVA 222
Query: 354 RQY 356
Y
Sbjct: 223 TGY 225
Score = 61 (26.5 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 15/64 (23%), Positives = 33/64 (51%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGW 350
F+L S S D+T+ WD+ + T + + +R + GG+ ++ D + L+++ +
Sbjct: 310 FLL--SGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 351 EPAR 354
+ R
Sbjct: 368 KNKR 371
Score = 48 (22.0 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 15/72 (20%), Positives = 32/72 (44%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL 338
+S++I+P + S+S D+T+ W++ V T + +R + ++ G L+
Sbjct: 196 SSVAIMPNGDHI-----VSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGT-LI 249
Query: 339 GGDTEGLKVYGW 350
+ V W
Sbjct: 250 ASSSNDQTVRVW 261
Score = 46 (21.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWE 351
S + D+T+ WD + T + + L F + ++ G + +KV WE
Sbjct: 355 SCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 226 (84.6 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 48/158 (30%), Positives = 79/158 (50%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H V CL +K L TG D + +W + C+ +L+GH+ V ++ F N +
Sbjct: 379 FTGHSDGVTCLQFNRK---YLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDN-Q 434
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ +S G S +IK+WN T GH+ ++ SVDF + SGS D +++W +
Sbjct: 435 KLISGGLDS-TIKVWNYHTGQCIATYRGHEDAVVSVDFT--NKSIVSGSADHTVRVWHVD 491
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ C YT RGH+ +N ++ I S +D +R+
Sbjct: 492 SRTC-YTLRGHTDWVNHVKIHSASNTIFSASDDTTIRM 528
Score = 178 (67.7 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 44/126 (34%), Positives = 64/126 (50%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
W G ++ I + +GHS V +QF + L G +IKIW + +TL GH
Sbjct: 369 WRKG-THTIKTFTGHSDGVTCLQFNR--KYLMTGSYDTTIKIWKIDSGECVKTLTGHTKG 425
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
+ ++ F L SG LDS IK+W+ CI TYRGH ++ S+ F+ + I SG
Sbjct: 426 VRALVFD--NQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFT--NKSIVSGSA 481
Query: 163 DGVVRI 168
D VR+
Sbjct: 482 DHTVRV 487
Score = 156 (60.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 37/135 (27%), Positives = 60/135 (44%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E + H V L Q L +GG D + +W CI + GH V SV
Sbjct: 414 ECVKTLTGHTKGVRALVF---DNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVD 470
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F N +++ +G ++++W++ T TL GH + V H + + S S D+ I+
Sbjct: 471 FTN--KSIVSGSADHTVRVWHVDSRTCY-TLRGHTDWVNHVKIHSASNTIFSASDDTTIR 527
Query: 126 LWDLRRKGCIYTYRG 140
+WD+ CI + G
Sbjct: 528 MWDMNSNECIKVFGG 542
Score = 51 (23.0 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSS 323
S + DR + WDL+ + T NSS
Sbjct: 683 SGAHDRLIKVWDLQNGKCLHTFSNNSS 709
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 205 (77.2 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 38/141 (26%), Positives = 74/141 (52%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LA+G D +N++ + + +L GH+ P+ S+ F + L G IKI+ +
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEV 219
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
++ TL+GH S + +V F P + S S D +K+WD+ + C++T+ H +
Sbjct: 220 QHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWG 279
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
++++ +G I S +D + +
Sbjct: 280 VKYNKNGSKIVSVADDQEIHV 300
Score = 199 (75.1 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 40/142 (28%), Positives = 70/142 (49%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
SG ++A+ D + LW L I ++ SV F + L+ G G + I+
Sbjct: 75 SGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFG 134
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ + +L+ I S+ + P G YL SG++D I ++D+ ++T GH+ I
Sbjct: 135 VETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIR 194
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
S+ FSPD Q + + +DG ++I
Sbjct: 195 SLTFSPDSQLLVTASDDGYIKI 216
Score = 164 (62.8 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 40/140 (28%), Positives = 66/140 (47%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88
Q LATG KVN++ + SL + S+ + + L++G G I I+++A
Sbjct: 119 QHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
+ TL GH I S+ F P L + S D +IK+++++ T GH + ++
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNV 238
Query: 149 RFSPDGQWIASGGEDGVVRI 168
FSPD S D V++
Sbjct: 239 AFSPDDTHFVSSSSDKSVKV 258
Score = 159 (61.0 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 40/118 (33%), Positives = 58/118 (49%)
Query: 57 HSTPVESVQFG----NGEETLSAGCQSGSIKIWNLAVPTV--QRTLNGHKSSITSVDFHP 110
H + SV +G +G E + +G +K+W + + Q TL GH+ + SVD P
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSP 74
Query: 111 YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
G+ + S SLD+ I+LWDL I S+ FSPD Q +A+G G V I
Sbjct: 75 SGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNI 132
Score = 75 (31.5 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
S + D +N +D+ L+ T E ++ IR LTFS + L+ +G +K+Y
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Score = 58 (25.5 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
SSS+D++V WD+ + V T + + + +++ G ++ D + + VY
Sbjct: 249 SSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVY 301
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 229 (85.7 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 50/143 (34%), Positives = 73/143 (51%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIW 85
SG LAT D + LW L K C ++L GH+ V S + + G+ SA S KIW
Sbjct: 413 SGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTS-KIW 471
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI 145
++ + TL GH S+ S++F P+ + L + S D + +WD R C + GH S+
Sbjct: 472 DVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSV 531
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
N F+P G IAS GV ++
Sbjct: 532 NDATFTPRGHIIASCDARGVTKL 554
Score = 201 (75.8 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 44/158 (27%), Positives = 75/158 (47%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H V+C+ + L + +D+ + L + N +++ SGH+ + F
Sbjct: 356 FRLHELPVSCIVM-HPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSG 414
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L+ +IK+W+L TL GH ++ S +H GD++ S SLD K+WD+
Sbjct: 415 SKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVN 474
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ C YT GH+ S+NSI F P + + D + +
Sbjct: 475 SERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSV 512
Score = 166 (63.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 49/158 (31%), Positives = 73/158 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H SVN + S +L T DK +++W C SL GH V F +
Sbjct: 485 HTDSVNSIEFFPFSN-ILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATF-TPRGHI 542
Query: 74 SAGCQS-GSIKIWNLA--VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
A C + G K+W+ +P V +++ SS V+F G L S + I L DL+
Sbjct: 543 IASCDARGVTKLWDFRKLIPIV--SIDVGPSSGNEVNFDQSGRVLAQASANGIIHLLDLK 600
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
G I+ GH ++S+ FS G+ + SGG DG +R+
Sbjct: 601 -SGQIHKLVGHESEVHSVVFSHLGENLYSGGSDGTIRL 637
Score = 154 (59.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 33/141 (23%), Positives = 59/141 (41%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G +A+ D +W + C +L GH+ V S++F L ++ +W+
Sbjct: 456 GDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDA 515
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+++L GH S+ F P G + S KLWD R+ I + S N
Sbjct: 516 RTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNE 575
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ F G+ +A +G++ +
Sbjct: 576 VNFDQSGRVLAQASANGIIHL 596
Score = 57 (25.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 19/78 (24%), Positives = 34/78 (43%)
Query: 293 ILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVYGWE 351
IL T+S AD+T++ WD + + ++ TF+ G + D G+ K++ +
Sbjct: 500 ILLTAS-ADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFR 558
Query: 352 ---PARQYDAQPMGWGKV 366
P D P +V
Sbjct: 559 KLIPIVSIDVGPSSGNEV 576
Score = 45 (20.9 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 10/52 (19%), Positives = 18/52 (34%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL 345
+ S A WD K + + + S+ + F + G L G+
Sbjct: 542 IIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGI 593
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 212 (79.7 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 39/141 (27%), Positives = 76/141 (53%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LA+G D +N++ + + +L GH+ P+ S+ F + L G IKI+++
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDV 219
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
++ TL+GH S + +V F P + S S D +K+WD+ + C++T+ H +
Sbjct: 220 QHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWG 279
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
++++ +G I S G+D + +
Sbjct: 280 VKYNRNGSKIVSVGDDQEIHV 300
Score = 194 (73.4 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 40/142 (28%), Positives = 69/142 (48%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
SG ++A+ D + LW L I S+ SV F + L+ G G + I+
Sbjct: 75 SGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFG 134
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ + +L+ I S+ + P G YL SG++D I ++D+ ++T GH+ I
Sbjct: 135 VETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIR 194
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
S+ FS D Q + + +DG ++I
Sbjct: 195 SLTFSTDSQLLVTASDDGYIKI 216
Score = 160 (61.4 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 40/140 (28%), Positives = 65/140 (46%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88
Q LATG KVN++ + SL + S+ + + L++G G I I+++A
Sbjct: 119 QHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
+ TL GH I S+ F L + S D +IK++D++ T GH + ++
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNV 238
Query: 149 RFSPDGQWIASGGEDGVVRI 168
FSPD S D V++
Sbjct: 239 AFSPDDAHFVSSSSDKSVKV 258
Score = 149 (57.5 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 42/161 (26%), Positives = 73/161 (45%)
Query: 13 AHGASVNCLALGKKSG---QVLATGGDDKKVNLWALGKSNCIM--SLSGHSTPVESVQFG 67
AH ++ + GK S +++ +G D V +W M +L GH V SV
Sbjct: 14 AHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVS 73
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+++ I++W+L R+++ SV F P +L +GS + ++
Sbjct: 74 PSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIF 133
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ Y+ K I SI +SPDG+++ASG DG++ I
Sbjct: 134 GVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 174
Score = 76 (31.8 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 34/119 (28%), Positives = 53/119 (44%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ 355
S + D +N +D+ L+ T E ++ IR LTFS + L+ +G +K+Y + A
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHA-S 223
Query: 356 YDAQPMGWGK-VQDLAVTGTQLWFRRVGTWSHQDSGFSTLDSYSAGSPVSTMGRERDQI 413
A G G V ++A + F V S D D SA + V T +DQ+
Sbjct: 224 LAATLSGHGSWVLNVAFSPDDAHF--VS--SSSDKSVKVWD-VSARTCVHTFLDHQDQV 277
Score = 63 (27.2 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
SSS+D++V WD+ + V T + + + ++ G ++ GD + + VY
Sbjct: 249 SSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVY 301
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 223 (83.6 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 47/138 (34%), Positives = 66/138 (47%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+A+ D V LW+L I + GHS V V + L C S ++W+L V
Sbjct: 281 MASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQ 340
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
GH + + FHP G +G LDSF ++WDLR C+ GH K I SI F
Sbjct: 341 EEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINF 400
Query: 151 SPDGQWIASGGEDGVVRI 168
SP+G +A+G D ++
Sbjct: 401 SPNGFHVATGSGDNACKV 418
Score = 213 (80.0 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 46/143 (32%), Positives = 69/143 (48%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
SG+ L T D LW L I+ GHS V + F G ++W+
Sbjct: 319 SGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWD 378
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
L L GH I S++F P G ++ +GS D+ K+WDLR++ CIYT H ++
Sbjct: 379 LRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVS 438
Query: 147 SIRFSP-DGQWIASGGEDGVVRI 168
S++F P DG ++ +G D +I
Sbjct: 439 SVKFQPNDGHYLLTGAYDNTAKI 461
Score = 195 (73.7 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 43/145 (29%), Positives = 68/145 (46%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G + TGG D +W L C+M L GH + S+ F ++ G + K+W+L
Sbjct: 362 GSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDL 421
Query: 88 AVPTVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
T+ H++ ++SV F P G YL +G+ D+ K+W + T GH +
Sbjct: 422 RQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVM 481
Query: 147 SIRFSPDGQWIASGGEDGVVRIGAS 171
+ SPDGQ IA+ D ++ S
Sbjct: 482 GVDLSPDGQLIATCSYDRTFKLWMS 506
Score = 185 (70.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 45/151 (29%), Positives = 72/151 (47%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS--------AGCQ 78
+ ++L T LW + I +L GH+T V ++ F + + TL+ A C
Sbjct: 227 NSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISF-HPQATLTLEESDVNMASCA 285
Query: 79 S-GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
+ GS+K+W+L + GH + V +HP G +L + D +LWDL + I
Sbjct: 286 ADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILH 345
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
GHSK ++ + F PDG +GG D R+
Sbjct: 346 QEGHSKGVHDLHFHPDGSLAGTGGLDSFARV 376
Score = 134 (52.2 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 32/119 (26%), Positives = 52/119 (43%)
Query: 49 NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDF 108
N S G P+ QF + L SG K+W + T+ RTL GH +++ ++ F
Sbjct: 207 NNFCSQIGDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISF 266
Query: 109 HPYGDY--------LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159
HP + S + D +KLW L I GHS + + + P G+++ +
Sbjct: 267 HPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGT 325
Score = 44 (20.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 25/131 (19%), Positives = 44/131 (33%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG-ECLLGGDTEGLKVYGWEP 352
L + D WDL V E + I + FS G G KV+
Sbjct: 364 LAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQ 423
Query: 353 ARQYDAQPMGWGKVQDLAVTGTQLWFRRVGTWSHQDSGFSTLDSYSAGSPVSTMGRERDQ 412
R P V + + G + + + + ++ SP+ T+ +
Sbjct: 424 RRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNT----AKIWTHPGWSPLKTLAGHEGK 479
Query: 413 IVPMNLSAPIG 423
++ ++LS P G
Sbjct: 480 VMGVDLS-PDG 489
Score = 43 (20.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 16/53 (30%), Positives = 22/53 (41%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYG--WE 351
D + WDLE + E +S + L F G L G T GL + W+
Sbjct: 329 DHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGS--LAG-TGGLDSFARVWD 378
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 224 (83.9 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 48/136 (35%), Positives = 73/136 (53%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NG 69
+ H A V+C+ S LATG DK V LW+ + N + +GH PV S+ F NG
Sbjct: 418 YAGHLADVDCVKFHPNSNY-LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNG 476
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
+ SAG + +K+W+LA T+ + L GH +ITS+ F P + S S+D+ +++WD+
Sbjct: 477 KYLASAG-EDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDI 535
Query: 130 RRKGCIYTYRGHSKSI 145
R C G S +
Sbjct: 536 RSSHCSTPADGSSSEL 551
Score = 215 (80.7 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 44/138 (31%), Positives = 69/138 (50%)
Query: 32 ATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91
A+ D+ LW+ ++ + +GH V+ V+F L+ G ++++W+
Sbjct: 396 ASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGN 455
Query: 92 VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRF 150
R GH+ + S+ F P G YL S D +KLWDL G +Y RGH+ +I S+ F
Sbjct: 456 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA-SGTLYKELRGHTDNITSLTF 514
Query: 151 SPDGQWIASGGEDGVVRI 168
SPD +AS D VR+
Sbjct: 515 SPDSSLVASASMDNSVRV 532
Score = 191 (72.3 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 39/141 (27%), Positives = 67/141 (47%)
Query: 23 LGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSI 82
L SG L + +D + W LG + GH+ PV + ++ +
Sbjct: 347 LADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTA 404
Query: 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS 142
++W+ R GH + + V FHP +YL +GS D ++LW ++ + + GH
Sbjct: 405 RLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHR 464
Query: 143 KSINSIRFSPDGQWIASGGED 163
+ S+ FSP+G+++AS GED
Sbjct: 465 GPVLSLAFSPNGKYLASAGED 485
Score = 153 (58.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 34/115 (29%), Positives = 53/115 (46%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GH PV S +F L + + SI+ W+L T GH + +D P+
Sbjct: 334 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSL 393
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y S S D +LW R + Y GH ++ ++F P+ ++A+G D VR+
Sbjct: 394 YFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 448
Score = 52 (23.4 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSST 324
TSL+ P S L S+S D +V WD+ S ST SS+
Sbjct: 510 TSLTFSPDSS-----LVASASMDNSVRVWDIRS-SHCSTPADGSSS 549
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 197 (74.4 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 39/140 (27%), Positives = 74/140 (52%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLA 88
++ + +D + +W + +L GH+ V+ + F + L A C + +IK+W+
Sbjct: 122 LMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLL-ASCSADMTIKLWDFQ 180
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
RT++GH +++SV P GD++ S S D +K+W++ C+ T+ GH + + +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMV 240
Query: 149 RFSPDGQWIASGGEDGVVRI 168
R + DG +AS D VR+
Sbjct: 241 RPNQDGTLLASCSNDQTVRV 260
Score = 194 (73.4 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+LSGH +PV V F + + + +IK+W+ +RTL GH S+ + F G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTG 162
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L S S D IKLWD + CI T GH +++S+ P+G I S D +++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKM 218
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 33/105 (31%), Positives = 56/105 (53%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
K G L +G DK + +W + C+M+L GH V V F G + + +++IW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIW 365
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ +TL+ H+ +TS+DFH Y+ +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 155 (59.6 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 39/141 (27%), Positives = 68/141 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEET 72
H SV ++ + +G++LA+ D + LW CI ++ GH V SV NG+
Sbjct: 149 HTDSVQDISFDQ-TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+SA + ++K+W +A +T GH+ + V + G L S S D +++W + K
Sbjct: 208 VSAS-RDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATK 266
Query: 133 GCIYTYRGHSKSINSIRFSPD 153
C R H + I ++P+
Sbjct: 267 ECKAELREHEHVVECISWAPE 287
Score = 150 (57.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 30/111 (27%), Positives = 57/111 (51%)
Query: 58 STPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCS 117
+T E+ + G L +G + +IK+W+++ TL GH + + V FHP G ++ S
Sbjct: 296 ATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVS 355
Query: 118 GSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ D +++WD + K C+ T H + S+ F ++ +G D V++
Sbjct: 356 CADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKV 406
Score = 139 (54.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 44/171 (25%), Positives = 75/171 (43%)
Query: 2 RAKVEKA-EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
R ++ +A D++ + KK ++ DKK K ++ L
Sbjct: 8 RDELNRAIADYLRSNGYEEAYSTFKKEAELDVNDELDKKFAGLLEKKWTSVIRLQKKVME 67
Query: 61 VESVQFGNGEETLSAGCQSGSI---KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCS 117
+ES + +E ++ G G K W + P + L+GH+S +T V FHP + S
Sbjct: 68 LES-KLNEAKEEITLGGPVGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSLMVS 125
Query: 118 GSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D+ IK+WD T +GH+ S+ I F G+ +AS D +++
Sbjct: 126 ASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKL 176
Score = 70 (29.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
L S SAD T+ WD + F + T + + + G+ ++ + +K+ WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKM--WEV 221
Query: 353 ARQY 356
A Y
Sbjct: 222 ATGY 225
Score = 69 (29.3 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGW 350
F+L S S D+T+ WD+ + T + + +R + F GG ++ D + L+++ +
Sbjct: 310 FLL--SGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 351 EPAR 354
+ R
Sbjct: 368 KNKR 371
Score = 49 (22.3 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 13/56 (23%), Positives = 25/56 (44%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWE 351
S + D+T+ WD + + T + + L F + ++ G + +KV WE
Sbjct: 355 SCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKV--WE 408
Score = 45 (20.9 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECL 337
+S++I+P + S+S D+T+ W++ V T + +R + ++ G L
Sbjct: 196 SSVAIMPNGDHI-----VSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLL 249
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 224 (83.9 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 49/142 (34%), Positives = 72/142 (50%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
SG LAT D V LW L K +CI++ GHS V S + + +++ + KIW+
Sbjct: 405 SGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWD 464
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ + TL GH S+ S++F P+ + L + S D + +WD R C + GH SIN
Sbjct: 465 VNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHSIN 524
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
F P G IAS GV ++
Sbjct: 525 DAIFDPRGHMIASCDACGVTKL 546
Score = 195 (73.7 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 42/158 (26%), Positives = 77/158 (48%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H V+C+++ + +L + G+D+ + L K N +++ GH+ + F
Sbjct: 348 FRLHELPVSCVSM-QPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSG 406
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ L+ ++K+W+L T GH ++ S +H G+++ S SLD K+WD+
Sbjct: 407 DKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVN 466
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ C T GH+ S+NSI F P + + D + I
Sbjct: 467 SERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSI 504
Score = 162 (62.1 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 43/160 (26%), Positives = 68/160 (42%)
Query: 11 FMAHGASV-NCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG 69
F H +V +C G +A+ DK +W + C +L GH+ V S++F
Sbjct: 432 FEGHSRAVWSCT--WHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPF 489
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
TL ++ IW+ +++L GH SI F P G + S KLWD
Sbjct: 490 SNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLWDF 549
Query: 130 RRKGCIYTYR-GHSKSINSIRFSPDGQWIASGGEDGVVRI 168
R+ I + G S N + F G+ +A +GV+ +
Sbjct: 550 RKLLPIVSIDIGPSPG-NEVNFDSSGRVLAQASGNGVIHL 588
Score = 152 (58.6 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 48/157 (30%), Positives = 70/157 (44%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H SVN + S +L T DK +++W C SL GH + F + +
Sbjct: 477 HTDSVNSIEFFPFSNTLL-TSSADKTLSIWDARTGICEQSLYGHMHSINDAIF-DPRGHM 534
Query: 74 SAGCQS-GSIKIWNLA--VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
A C + G K+W+ +P V + S V+F G L S + I L DL+
Sbjct: 535 IASCDACGVTKLWDFRKLLPIVSIDIG--PSPGNEVNFDSSGRVLAQASGNGVIHLLDLK 592
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
G I+ GH +++ FS DG+ + SGG DG VR
Sbjct: 593 -SGEIHKLMGHENEAHTVVFSHDGEILFSGGSDGTVR 628
Score = 46 (21.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 12/49 (24%), Positives = 21/49 (42%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL 345
+SSAD+T++ WD + + +I F G + D G+
Sbjct: 495 TSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGV 543
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 223 (83.6 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 48/136 (35%), Positives = 73/136 (53%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NG 69
+ H A V+C+ S LATG DK V LW+ + N + +GH PV S+ F NG
Sbjct: 422 YAGHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG 480
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
+ SAG + +K+W+LA T+ + L GH +ITS+ F P + S S+D+ +++WD+
Sbjct: 481 KYLASAG-EDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDI 539
Query: 130 RRKGCIYTYRGHSKSI 145
R C G S +
Sbjct: 540 RNTYCSAPADGSSSEL 555
Score = 220 (82.5 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 46/138 (33%), Positives = 70/138 (50%)
Query: 32 ATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91
A+G D+ LW+ ++ + +GH V+ V+F L+ G ++++W+
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 92 VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRF 150
R GH+ + S+ F P G YL S D +KLWDL G +Y RGH+ +I S+ F
Sbjct: 460 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA-SGTLYKELRGHTDNITSLTF 518
Query: 151 SPDGQWIASGGEDGVVRI 168
SPD IAS D VR+
Sbjct: 519 SPDSGLIASASMDNSVRV 536
Score = 196 (74.1 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 40/141 (28%), Positives = 68/141 (48%)
Query: 23 LGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSI 82
L SG L + +D + W LG + GH+ PV + ++G +
Sbjct: 351 LADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTA 408
Query: 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS 142
++W+ R GH + + V FHP +YL +GS D ++LW ++ + + GH
Sbjct: 409 RLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHR 468
Query: 143 KSINSIRFSPDGQWIASGGED 163
+ S+ FSP+G+++AS GED
Sbjct: 469 GPVLSLAFSPNGKYLASAGED 489
Score = 164 (62.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 36/115 (31%), Positives = 54/115 (46%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GH PV S +F L + + SI+ W+L T GH + +D PY
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSL 397
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y SGS D +LW R + Y GH ++ ++F P+ ++A+G D VR+
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Score = 48 (22.0 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
TSL+ P S ++ S+S D +V WD+ + + +SS +
Sbjct: 514 TSLTFSPDSGLIA-----SASMDNSVRVWDIRNTYCSAPADGSSSEL 555
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 223 (83.6 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 48/136 (35%), Positives = 73/136 (53%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NG 69
+ H A V+C+ S LATG DK V LW+ + N + +GH PV S+ F NG
Sbjct: 422 YAGHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG 480
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
+ SAG + +K+W+LA T+ + L GH +ITS+ F P + S S+D+ +++WD+
Sbjct: 481 KYLASAG-EDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
Query: 130 RRKGCIYTYRGHSKSI 145
R C G S +
Sbjct: 540 RNTHCSAPTDGSSSEL 555
Score = 218 (81.8 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 44/137 (32%), Positives = 67/137 (48%)
Query: 32 ATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91
A+G D+ LW+ ++ + +GH V+ V+F L+ G ++++W+
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 92 VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151
R GH+ + S+ F P G YL S D +KLWDL RGH+ +I S+ FS
Sbjct: 460 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFS 519
Query: 152 PDGQWIASGGEDGVVRI 168
PD IAS D VR+
Sbjct: 520 PDSSLIASASMDNSVRV 536
Score = 199 (75.1 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 41/141 (29%), Positives = 68/141 (48%)
Query: 23 LGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSI 82
L SG L + +D + W LG + GH+ PV V ++G +
Sbjct: 351 LADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTA 408
Query: 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS 142
++W+ R GH + + V FHP +YL +GS D ++LW ++ + + GH
Sbjct: 409 RLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHR 468
Query: 143 KSINSIRFSPDGQWIASGGED 163
+ S+ FSP+G+++AS GED
Sbjct: 469 GPVLSLAFSPNGKYLASAGED 489
Score = 167 (63.8 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 37/115 (32%), Positives = 54/115 (46%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GH PV S +F L + + SI+ W+L T GH + VD PY
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSL 397
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y SGS D +LW R + Y GH ++ ++F P+ ++A+G D VR+
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 217 (81.4 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
Identities = 42/157 (26%), Positives = 78/157 (49%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H VNC+ + S + ATG +D+ + +W L ++L+GH + ++
Sbjct: 283 LGHSGWVNCVDVDI-SNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNP 341
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
L + + +K W+L V R +GH S + + HP D L SG D+ +++WD+R
Sbjct: 342 YLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRT 401
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
K ++ GH+ ++ SI + SG +D ++R+
Sbjct: 402 KSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRL 438
Score = 172 (65.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 47/178 (26%), Positives = 80/178 (44%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H S+ + + KK+ + + G +D +V W L + I GH + V + + L
Sbjct: 327 HINSIRDIKISKKNPYLFSCG-EDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLL 385
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+G + +++W++ + L+GH ++ S+ + SGS D I+LWDL
Sbjct: 386 MSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGK 445
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGV-VRIGAS--FHLTNTSIH-VVDLSLV 187
C + H KSI S+ P S G D V V GA F T + +++ SL+
Sbjct: 446 CRISLTHHKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADAEFDRNITGFNSIINCSLI 503
Score = 162 (62.1 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 38/118 (32%), Positives = 62/118 (52%)
Query: 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG 69
D+ H + V CL+L S +L +GG D V +W + + + LSGH+ V S+ +
Sbjct: 365 DYHGHLSGVYCLSL-HPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSV 423
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
E + +G Q I++W+L + +L HK SI S+ HP+ CS D+ +K+W
Sbjct: 424 EPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFCSCGTDN-VKVW 480
Score = 54 (24.1 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
Identities = 21/73 (28%), Positives = 32/73 (43%)
Query: 297 SSSADRTVNFWDLEKFSL-VSTTEKNSSTIRRLTFS--EGGECLLGGDTEGLKVYGWEPA 353
S S D+ + WDL +S T S IR L+ E C G T+ +KV+ A
Sbjct: 429 SGSQDKMIRLWDLNNGKCRISLTHHKKS-IRSLSIHPFEYSFCSCG--TDNVKVWCGADA 485
Query: 354 RQYDAQPMGWGKV 366
++D G+ +
Sbjct: 486 -EFDRNITGFNSI 497
Score = 45 (20.9 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 321 NSSTIRRLT-FSEGGECLLGGDTEGLKVYGWEPARQYD 357
N S I++ F++ +LG + L Y W +YD
Sbjct: 499 NCSLIKQDPYFNDSSILILGSNNGQLHFYDWSSGYKYD 536
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 217 (81.4 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
Identities = 42/157 (26%), Positives = 78/157 (49%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H VNC+ + S + ATG +D+ + +W L ++L+GH + ++
Sbjct: 283 LGHSGWVNCVDVDI-SNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNP 341
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
L + + +K W+L V R +GH S + + HP D L SG D+ +++WD+R
Sbjct: 342 YLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRT 401
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
K ++ GH+ ++ SI + SG +D ++R+
Sbjct: 402 KSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRL 438
Score = 172 (65.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 47/178 (26%), Positives = 80/178 (44%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H S+ + + KK+ + + G +D +V W L + I GH + V + + L
Sbjct: 327 HINSIRDIKISKKNPYLFSCG-EDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLL 385
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+G + +++W++ + L+GH ++ S+ + SGS D I+LWDL
Sbjct: 386 MSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGK 445
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGV-VRIGAS--FHLTNTSIH-VVDLSLV 187
C + H KSI S+ P S G D V V GA F T + +++ SL+
Sbjct: 446 CRISLTHHKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADAEFDRNITGFNSIINCSLI 503
Score = 162 (62.1 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 38/118 (32%), Positives = 62/118 (52%)
Query: 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG 69
D+ H + V CL+L S +L +GG D V +W + + + LSGH+ V S+ +
Sbjct: 365 DYHGHLSGVYCLSL-HPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSV 423
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
E + +G Q I++W+L + +L HK SI S+ HP+ CS D+ +K+W
Sbjct: 424 EPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFCSCGTDN-VKVW 480
Score = 54 (24.1 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
Identities = 21/73 (28%), Positives = 32/73 (43%)
Query: 297 SSSADRTVNFWDLEKFSL-VSTTEKNSSTIRRLTFS--EGGECLLGGDTEGLKVYGWEPA 353
S S D+ + WDL +S T S IR L+ E C G T+ +KV+ A
Sbjct: 429 SGSQDKMIRLWDLNNGKCRISLTHHKKS-IRSLSIHPFEYSFCSCG--TDNVKVWCGADA 485
Query: 354 RQYDAQPMGWGKV 366
++D G+ +
Sbjct: 486 -EFDRNITGFNSI 497
Score = 45 (20.9 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 321 NSSTIRRLT-FSEGGECLLGGDTEGLKVYGWEPARQYD 357
N S I++ F++ +LG + L Y W +YD
Sbjct: 499 NCSLIKQDPYFNDSSILILGSNNGQLHFYDWSSGYKYD 536
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 207 (77.9 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LA+G D +N++ + + +L GH+ P+ S+ F + L G IKI+++
Sbjct: 142 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 201
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+ TL+GH S + +V F P + S S D +K+WD+ + C++T+ H +
Sbjct: 202 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWG 261
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
++++ +G I S G+D + I
Sbjct: 262 VKYNGNGSKIVSVGDDQEIHI 282
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 36/129 (27%), Positives = 63/129 (48%)
Query: 40 VNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGH 99
V LW L I S+ ++ F + L+ G G + I+ + + +L+
Sbjct: 70 VRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTR 129
Query: 100 KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159
I S+ + P G YL SG++D I ++D+ ++T GH+ I S+ FSPD Q + +
Sbjct: 130 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVT 189
Query: 160 GGEDGVVRI 168
+DG ++I
Sbjct: 190 ASDDGYIKI 198
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 43/148 (29%), Positives = 69/148 (46%)
Query: 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80
LA S Q LATG KVN++ + SL + S+ + + L++G G
Sbjct: 94 LAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 152
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
I I+++A + TL GH I S+ F P L + S D +IK++D++ T G
Sbjct: 153 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 212
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRI 168
H+ + ++ F PD S D V++
Sbjct: 213 HASWVLNVAFCPDDTHFVSSSSDKSVKV 240
Score = 106 (42.4 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 76 GCQSG--SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
G Q G S+++W+L ++++ ++ F P YL +G+ + ++ +
Sbjct: 62 GHQLGVVSVRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK 121
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y+ K I SI +SPDG+++ASG DG++ I
Sbjct: 122 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 156
Score = 75 (31.5 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
S + D +N +D+ L+ T E ++ IR LTFS + L+ +G +K+Y
Sbjct: 147 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 199
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 208 (78.3 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 47/158 (29%), Positives = 77/158 (48%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN--GE 70
AH + +AL K SG TG D+ LW + +L GH V ++ F N G+
Sbjct: 90 AHILPLTNVALNK-SGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGD 148
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ ++ G + K+W++ T GH + I + F+P + +GS+D+ KLWD++
Sbjct: 149 K-IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++T GHS I S+ F+ G I +G D V +
Sbjct: 208 SGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTV 245
Score = 202 (76.2 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 47/158 (29%), Positives = 71/158 (44%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A + CL+ +S ++ATG D LW + + +L+GHS + S+ F
Sbjct: 173 FRGHTAEIVCLSFNPQS-TLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSG 231
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ G ++ +W TL GH + I+S F+ + +GS+D KLWD
Sbjct: 232 NRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAV 291
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T GH I F G+ IA+ DG RI
Sbjct: 292 NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARI 329
Score = 197 (74.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 43/162 (26%), Positives = 72/162 (44%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K + H A ++ +L TG DK LW C+ +L+GH + F
Sbjct: 253 KVYTLIGHCAEISSAVFNWDCSLIL-TGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCF 311
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ ++ G+ +I++ A L GH+ I+ + F+P G+ L +GS D ++
Sbjct: 312 DYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARI 371
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD + C+ GH+ I S F+ G I +G +D RI
Sbjct: 372 WDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRI 413
Score = 196 (74.1 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 47/167 (28%), Positives = 76/167 (45%)
Query: 3 AKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVE 62
A E+ H V +A G +ATG DK LW++ C + GH+ +
Sbjct: 122 ASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIV 181
Query: 63 SVQFGNGEETLSA-GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD 121
+ F N + TL A G + K+W++ TL GH + I S+ F+ G+ + +GS D
Sbjct: 182 CLSF-NPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFD 240
Query: 122 SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ +W+ +YT GH I+S F+ D I +G D ++
Sbjct: 241 HTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKL 287
Score = 186 (70.5 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 41/139 (29%), Positives = 66/139 (47%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFH-PYG 112
L H P+ +V G + K+W+ A TL GH++ + ++ F+ PYG
Sbjct: 88 LRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI---- 168
D + +GS D KLW + C +T+RGH+ I + F+P +A+G D ++
Sbjct: 148 DKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 169 -GAS-FHLTNTSIHVVDLS 185
G F LT S ++ LS
Sbjct: 208 SGEEVFTLTGHSAEIISLS 226
Score = 168 (64.2 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 41/166 (24%), Positives = 66/166 (39%)
Query: 5 VEKAED-FMAHGASVNCLALG-KKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVE 62
++ E+ F G S ++L SG + TG D V +W + +L GH +
Sbjct: 206 IQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEIS 265
Query: 63 SVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS 122
S F + G + K+W+ TL GH I F G + + S D
Sbjct: 266 SAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADG 325
Query: 123 FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+++ + C+ GH I+ I F+P G + +G D RI
Sbjct: 326 TARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARI 371
Score = 131 (51.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+G+++AT D +++ C+ L GH + + F L G + +IW+
Sbjct: 314 TGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD 373
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ L GH I S F+ GD + +GS D+ ++W
Sbjct: 374 AQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 56 (24.8 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL 338
+ +S PQ L LT SS D+T WD + + E ++ I F+ G+ ++
Sbjct: 349 SKISFNPQGNRL---LTGSS--DKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIII 403
Query: 339 GGDTE 343
G +
Sbjct: 404 TGSKD 408
Score = 49 (22.3 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 13/54 (24%), Positives = 21/54 (38%)
Query: 291 CFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
C ++ T S D+T WD V+T + I F G+ + +G
Sbjct: 273 CSLILTGSM-DKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADG 325
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 224 (83.9 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 43/136 (31%), Positives = 69/136 (50%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
L + +D + LW+L C++ GH+ PV QF +G ++W
Sbjct: 514 LLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHY 573
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
R GH + +T FHP +Y+ +GS D ++LWD+ C+ + GH I+S+ F
Sbjct: 574 QPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAF 633
Query: 151 SPDGQWIASGGEDGVV 166
SP+G+++ASG DG V
Sbjct: 634 SPNGKFLASGSTDGRV 649
Score = 218 (81.8 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 45/141 (31%), Positives = 70/141 (49%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G +GG D+ LWA + +GH V +F ++ G ++++W++
Sbjct: 553 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDV 612
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
R GHK I S+ F P G +L SGS D + LWD+ I +GH+ +I +
Sbjct: 613 LNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYA 672
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
++FS DG+ IASG D VR+
Sbjct: 673 LKFSRDGEIIASGSIDNTVRL 693
Score = 202 (76.2 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 39/121 (32%), Positives = 63/121 (52%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A V C S V ATG D+ V LW + NC+ +GH P+ S+ F
Sbjct: 579 FAGHLADVTCTRFHPNSNYV-ATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNG 637
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ L++G G + +W++ + L GH +I ++ F G+ + SGS+D+ ++LWD+
Sbjct: 638 KFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVM 697
Query: 131 R 131
R
Sbjct: 698 R 698
Score = 172 (65.6 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 35/115 (30%), Positives = 52/115 (45%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GHS PV V F L + + G+I++W+L T GH + F P+G
Sbjct: 495 LHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGY 554
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y SG D +LW + + GH + RF P+ ++A+G D VR+
Sbjct: 555 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRL 609
Score = 164 (62.8 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 36/101 (35%), Positives = 53/101 (52%)
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153
+ L+GH + V F P +YL S S D I+LW L+ C+ Y+GH+ + +FSP
Sbjct: 493 KILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPF 552
Query: 154 GQWIASGGEDGVVRIGASFHLTNTSI---HVVDLSLV--HP 189
G + SGG D V R+ A+ H I H+ D++ HP
Sbjct: 553 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHP 593
Score = 83 (34.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
+ S+DRTV WD+ + V + I L FS G+ L G T+G +V W+
Sbjct: 600 TGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDG-RVLLWD 653
Score = 78 (32.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 25/91 (27%), Positives = 39/91 (42%)
Query: 268 SGTCVPVSVSRTS-LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326
+G CV + + L SP F+ S S D V WD+ +++ + ++ TI
Sbjct: 614 NGNCVRIFTGHKGPIHSLAFSPNGKFL--ASGSTDGRVLLWDIGHGLMIAELKGHTGTIY 671
Query: 327 RLTFSEGGECLLGGDTEGLKVYGWEPARQYD 357
L FS GE + G + V W+ R D
Sbjct: 672 ALKFSRDGEIIASGSIDNT-VRLWDVMRAID 701
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 222 (83.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 46/125 (36%), Positives = 70/125 (56%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NG 69
+ H A V+C+ S LATG DK V LW+ + N + +GH PV S+ F NG
Sbjct: 440 YAGHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG 498
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
+ SAG + +K+W+LA T+ + L GH +ITS+ F P + S S+D+ +++WD+
Sbjct: 499 KYLASAG-EDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 557
Query: 130 RRKGC 134
R C
Sbjct: 558 RNTYC 562
Score = 222 (83.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 46/138 (33%), Positives = 70/138 (50%)
Query: 32 ATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91
A+G D+ LW+ ++ + +GH V+ V+F L+ G ++++W+
Sbjct: 418 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 477
Query: 92 VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRF 150
R GH+ + S+ F P G YL S D +KLWDL G +Y RGH+ +I S+ F
Sbjct: 478 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA-SGTLYKELRGHTDNITSLTF 536
Query: 151 SPDGQWIASGGEDGVVRI 168
SPD IAS D VR+
Sbjct: 537 SPDSSLIASASMDNSVRV 554
Score = 196 (74.1 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 40/141 (28%), Positives = 68/141 (48%)
Query: 23 LGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSI 82
L SG L + +D + W LG + GH+ PV + ++G +
Sbjct: 369 LADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTA 426
Query: 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS 142
++W+ R GH + + V FHP +YL +GS D ++LW ++ + + GH
Sbjct: 427 RLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHR 486
Query: 143 KSINSIRFSPDGQWIASGGED 163
+ S+ FSP+G+++AS GED
Sbjct: 487 GPVLSLAFSPNGKYLASAGED 507
Score = 164 (62.8 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 36/115 (31%), Positives = 54/115 (46%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GH PV S +F L + + SI+ W+L T GH + +D PY
Sbjct: 356 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSL 415
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y SGS D +LW R + Y GH ++ ++F P+ ++A+G D VR+
Sbjct: 416 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 470
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 203 (76.5 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 53/184 (28%), Positives = 85/184 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEET 72
H V C A G+++ + +DK + +W C+ + S V F NG
Sbjct: 143 HTHWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCI 201
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
SAG ++KIW++ V + + H + V FHP G+YL + S D +K+ DL
Sbjct: 202 ASAGSDH-TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEG 260
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG-ASF-HLTNTSIHVVDLSLVHPL 190
IYT +GH+ + ++ FS G+ SGG D V + +F L + +L +H
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWRTNFDELNYKDVSKRNLKRLH-F 319
Query: 191 GTPP 194
+PP
Sbjct: 320 DSPP 323
Score = 200 (75.5 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 44/141 (31%), Positives = 65/141 (46%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G +LA+ D+ + LW K H+ PV SV F + L++ + SIK+WN+
Sbjct: 72 GNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNM 131
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+L H + F P G + S S D IK+WD K C+ + N
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANF 191
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ F+P+G IAS G D V+I
Sbjct: 192 VAFNPNGTCIASAGSDHTVKI 212
Score = 199 (75.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 47/158 (29%), Positives = 76/158 (48%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A++ + +G+ LATG D + LW+L GH + SVQF
Sbjct: 14 FKGHKAAITSVDFSP-NGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLG 72
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L++ + +I++W H + + SVDF G +L S S D IK+W++
Sbjct: 73 NLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMY 132
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
R+ +Y+ H+ + +FSPDG+ I S ED ++I
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Score = 197 (74.4 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K+ +F AH A V + GQ LA+ +DK + +W + + + SL H+ V +F
Sbjct: 94 KSSEFKAHTAPVRSVDFSA-DGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKF 152
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ + + +IKIW+ + V F+P G + S D +K+
Sbjct: 153 SPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKI 212
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD+R + Y+ HS +N + F P G ++ + DG ++I
Sbjct: 213 WDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKI 254
Score = 187 (70.9 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 35/79 (44%), Positives = 49/79 (62%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P ++R GHK++ITSVDF P G L +GS D+F+ LW LR + + Y GH I S++
Sbjct: 8 PVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQ 67
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSP G +AS D +R+
Sbjct: 68 FSPLGNLLASASRDRTIRL 86
Score = 67 (28.6 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350
+++T SS D T+ DL + L+ T + ++ + ++FS+GGE G + +V W
Sbjct: 242 YLITASS--DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADA-QVLLW 297
Score = 65 (27.9 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKV 347
S+ +D TV WD+ L+ + +S + ++F G L+ ++G LK+
Sbjct: 203 SAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKI 254
Score = 54 (24.1 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 13/56 (23%), Positives = 22/56 (39%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
L S S D+T+ WD V+ + F+ G C+ G +K++
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIW 213
Score = 49 (22.3 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 9/53 (16%), Positives = 29/53 (54%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
S+S D+++ W++ + + + +++ +R FS G ++ + + +K++
Sbjct: 119 SASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 198 (74.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 49/158 (31%), Positives = 75/158 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++N +++ G +G D V LW L I S GH++ V SV F +
Sbjct: 71 HSQAINDVSISS-DGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQI 129
Query: 74 SAGCQSGSIKIWN-LAVPTVQRTLNGHKSSITSVDFHPYGDY--LCSGSLDSFIKLWDLR 130
+ + +IK+WN LA T H IT V F P + + S D +K+W+L+
Sbjct: 130 VSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLK 189
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
GH+ +N++ SPDG ASGG+DGV ++
Sbjct: 190 NCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKL 227
Score = 169 (64.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 53/208 (25%), Positives = 93/208 (44%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLW-ALGKSNCIMSLSGHSTPVESV 64
E F+ H + V ++ + Q+++ D K + LW L + ++ H+ + V
Sbjct: 105 ETIRSFIGHTSDVFSVSFSPDNRQIVSASRD-KTIKLWNTLAQCKYTITDQQHTDWITCV 163
Query: 65 QFG-NGEETLSAGCQSGS-IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS 122
+F + + + C +K+WNL + + L GH + +V P G SG D
Sbjct: 164 RFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDG 223
Query: 123 FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-GASFHLTNTSIHV 181
KLWD++ +Y+ S +INS+ FSP W+ + D +RI L + I+
Sbjct: 224 VAKLWDVKEGKHLYSLETGS-TINSLCFSPCDYWLCAA-TDRFIRIWNLESKLIISEIYP 281
Query: 182 VDLSLVHPLGTPPPQYTSSVPFSHNTSL 209
V S + G P + +S+ +S N L
Sbjct: 282 VKQSKI---GVP---WCTSLTWSANGQL 303
Score = 154 (59.3 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 43/151 (28%), Positives = 71/151 (47%)
Query: 29 QVLATGGDDKKVNLWALGKSN-------CIMSLSGHSTPVESVQFGNGEETLSAGCQSGS 81
+ + + DKK+ +W + + SL+GHS + V + +G S
Sbjct: 36 KTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHS 95
Query: 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY--R 139
+++W+L++ R+ GH S + SV F P + S S D IKLW+ + C YT +
Sbjct: 96 VRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQ-CKYTITDQ 154
Query: 140 GHSKSINSIRFSPDGQW--IASGGEDGVVRI 168
H+ I +RFSP I S G D +V++
Sbjct: 155 QHTDWITCVRFSPSPNQAIIVSCGWDKLVKV 185
Score = 148 (57.2 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 35/122 (28%), Positives = 59/122 (48%)
Query: 56 GHSTPVESVQFGNGEE--TLSAGCQSGSIKIWNL-------AVPTVQRTLNGHKSSITSV 106
GHS V SV + T+ + + + +WN+ + T +++L GH +I V
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 107 DFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
G + SGS D ++LWDL I ++ GH+ + S+ FSPD + I S D +
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 167 RI 168
++
Sbjct: 139 KL 140
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 40/162 (24%), Positives = 74/162 (45%)
Query: 14 HGASVNCLALGKKSGQ-VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
H + C+ Q ++ + G DK V +W L + +L GH+ + +V
Sbjct: 156 HTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSL 215
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
++G + G K+W++ +L S+I S+ F P +LC+ + D FI++W+L K
Sbjct: 216 CASGGKDGVAKLWDVKEGKHLYSLETG-STINSLCFSPCDYWLCAAT-DRFIRIWNLESK 273
Query: 133 ---GCIYTYRGHSKSI---NSIRFSPDGQWIASGGEDGVVRI 168
IY + + S+ +S +GQ + G DG + +
Sbjct: 274 LIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYV 315
Score = 59 (25.8 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 32/135 (23%), Positives = 52/135 (38%)
Query: 244 ELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRT 303
+L+ T+A C Y+ Q H TCV S P SP I+ S D+
Sbjct: 139 KLWNTLAQ-CKYTITDQQHTDWI---TCVRFS---------P-SPNQAIIV--SCGWDKL 182
Query: 304 VNFWDLEKFSLVSTTEKNSSTIRRLTFS-EGGECLLGGDTEGLKVYGWEPARQYDAQPMG 362
V W+L+ L E ++ + +T S +G C GG K++ + + + G
Sbjct: 183 VKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG 242
Query: 363 WGKVQDLAVTGTQLW 377
+ L + W
Sbjct: 243 -STINSLCFSPCDYW 256
Score = 58 (25.5 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 298 SSADRTVNFWDLEKFSLVSTTE--KNSST----IRRLTFSEGGECLLGGDTEGLKVYGWE 351
++ DR + W+LE ++S K S LT+S G+ L G T+G +Y +E
Sbjct: 259 AATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDG-NIYVYE 317
Score = 43 (20.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 297 SSSADRTVNFWD-LEKFSLVSTTEKNSSTIRRLTFS 331
S+S D+T+ W+ L + T ++++ I + FS
Sbjct: 131 SASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFS 166
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 198 (74.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 49/158 (31%), Positives = 75/158 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++N +++ G +G D V LW L I S GH++ V SV F +
Sbjct: 71 HSQAINDVSISS-DGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQI 129
Query: 74 SAGCQSGSIKIWN-LAVPTVQRTLNGHKSSITSVDFHPYGDY--LCSGSLDSFIKLWDLR 130
+ + +IK+WN LA T H IT V F P + + S D +K+W+L+
Sbjct: 130 VSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLK 189
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
GH+ +N++ SPDG ASGG+DGV ++
Sbjct: 190 NCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKL 227
Score = 169 (64.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 53/208 (25%), Positives = 93/208 (44%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLW-ALGKSNCIMSLSGHSTPVESV 64
E F+ H + V ++ + Q+++ D K + LW L + ++ H+ + V
Sbjct: 105 ETIRSFIGHTSDVFSVSFSPDNRQIVSASRD-KTIKLWNTLAQCKYTITDQQHTDWITCV 163
Query: 65 QFG-NGEETLSAGCQSGS-IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS 122
+F + + + C +K+WNL + + L GH + +V P G SG D
Sbjct: 164 RFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDG 223
Query: 123 FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-GASFHLTNTSIHV 181
KLWD++ +Y+ S +INS+ FSP W+ + D +RI L + I+
Sbjct: 224 VAKLWDVKEGKHLYSLETGS-TINSLCFSPCDYWLCAA-TDRFIRIWNLESKLIISEIYP 281
Query: 182 VDLSLVHPLGTPPPQYTSSVPFSHNTSL 209
V S + G P + +S+ +S N L
Sbjct: 282 VKQSKI---GVP---WCTSLTWSANGQL 303
Score = 154 (59.3 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 43/151 (28%), Positives = 71/151 (47%)
Query: 29 QVLATGGDDKKVNLWALGKSN-------CIMSLSGHSTPVESVQFGNGEETLSAGCQSGS 81
+ + + DKK+ +W + + SL+GHS + V + +G S
Sbjct: 36 KTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHS 95
Query: 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY--R 139
+++W+L++ R+ GH S + SV F P + S S D IKLW+ + C YT +
Sbjct: 96 VRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQ-CKYTITDQ 154
Query: 140 GHSKSINSIRFSPDGQW--IASGGEDGVVRI 168
H+ I +RFSP I S G D +V++
Sbjct: 155 QHTDWITCVRFSPSPNQAIIVSCGWDKLVKV 185
Score = 148 (57.2 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 35/122 (28%), Positives = 59/122 (48%)
Query: 56 GHSTPVESVQFGNGEE--TLSAGCQSGSIKIWNL-------AVPTVQRTLNGHKSSITSV 106
GHS V SV + T+ + + + +WN+ + T +++L GH +I V
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 107 DFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
G + SGS D ++LWDL I ++ GH+ + S+ FSPD + I S D +
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 167 RI 168
++
Sbjct: 139 KL 140
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 40/162 (24%), Positives = 74/162 (45%)
Query: 14 HGASVNCLALGKKSGQ-VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
H + C+ Q ++ + G DK V +W L + +L GH+ + +V
Sbjct: 156 HTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSL 215
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
++G + G K+W++ +L S+I S+ F P +LC+ + D FI++W+L K
Sbjct: 216 CASGGKDGVAKLWDVKEGKHLYSLETG-STINSLCFSPCDYWLCAAT-DRFIRIWNLESK 273
Query: 133 ---GCIYTYRGHSKSI---NSIRFSPDGQWIASGGEDGVVRI 168
IY + + S+ +S +GQ + G DG + +
Sbjct: 274 LIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYV 315
Score = 59 (25.8 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 32/135 (23%), Positives = 52/135 (38%)
Query: 244 ELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRT 303
+L+ T+A C Y+ Q H TCV S P SP I+ S D+
Sbjct: 139 KLWNTLAQ-CKYTITDQQHTDWI---TCVRFS---------P-SPNQAIIV--SCGWDKL 182
Query: 304 VNFWDLEKFSLVSTTEKNSSTIRRLTFS-EGGECLLGGDTEGLKVYGWEPARQYDAQPMG 362
V W+L+ L E ++ + +T S +G C GG K++ + + + G
Sbjct: 183 VKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG 242
Query: 363 WGKVQDLAVTGTQLW 377
+ L + W
Sbjct: 243 -STINSLCFSPCDYW 256
Score = 58 (25.5 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 298 SSADRTVNFWDLEKFSLVSTTE--KNSST----IRRLTFSEGGECLLGGDTEGLKVYGWE 351
++ DR + W+LE ++S K S LT+S G+ L G T+G +Y +E
Sbjct: 259 AATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDG-NIYVYE 317
Score = 43 (20.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 297 SSSADRTVNFWD-LEKFSLVSTTEKNSSTIRRLTFS 331
S+S D+T+ W+ L + T ++++ I + FS
Sbjct: 131 SASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFS 166
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 215 (80.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 49/171 (28%), Positives = 88/171 (51%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E+ + H + VN ++ Q++ TG DD V LW + K I + ++ V +V
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVT 201
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F + + + +G IK+W+L + T+ GH S+T + G YL S ++D+ ++
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 261
Query: 126 LWDLR----RKGCIYTYRG--HSKSINSIR--FSPDGQWIASGGEDGVVRI 168
+WD+R ++ C+ ++G H+ N +R +SPDG IA+G D V +
Sbjct: 262 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Score = 200 (75.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWN 86
G +L + DK V +W + L GH++ V S G + + G G++K+W+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ +T + + +V F+ D + SG +D+ IK+WDLR+ YT RGH+ S+
Sbjct: 182 IRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 240
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
+ S +G ++ S D VR+
Sbjct: 241 GLSLSSEGSYLLSNAMDNTVRV 262
Score = 173 (66.0 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 43/157 (27%), Positives = 74/157 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWAL-GKSNCIMSLSGHSTPVESVQFGNGEET 72
H V C +G LA+ G D+ + LW + G + +L GHS V + +
Sbjct: 66 HEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRR 131
L + ++ +W+ + L GH S + S G L C+GS D +KLWD+R+
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
K I T++ ++ + ++ F+ I SGG D +++
Sbjct: 185 KAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 35/151 (23%), Positives = 70/151 (46%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
S Q+++ GG D + +W L ++ ++ GH+ V + + L + ++++W+
Sbjct: 206 SDQIIS-GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Query: 87 L--------AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+ V Q ++ + ++ + P G + +GS D F+ +WD + +Y
Sbjct: 265 VRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKL 324
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169
GH+ SIN + F PD I S D + +G
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSDKRLYMG 355
Score = 136 (52.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 37/121 (30%), Positives = 57/121 (47%)
Query: 51 IMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDF 108
IM LSGH V +F NG SAG I +WN+ TL GH ++ + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 109 HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIASGGEDGVVR 167
+ G L S S D + +WD + +GH+ +NS + G Q + +G +DG V+
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 168 I 168
+
Sbjct: 179 L 179
Score = 70 (29.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
L + S D TV WD+ K + + T + N+ + +TF++ + ++ GG +KV+
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW 221
Score = 57 (25.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
S D + WDL + L T ++ ++ L+ S G LL + ++V+ P
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Score = 49 (22.3 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 297 SSSADRTVNFWDLEKFS----LVSTTEKN----SSTIRRLTFSEGGECLLGGDTEGLKVY 348
S++ D TV WD+ F+ V + N + R ++S G + G + VY
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF-VY 311
Query: 349 GWE 351
W+
Sbjct: 312 VWD 314
Score = 42 (19.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 10/47 (21%), Positives = 20/47 (42%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
+ SADR V WD ++ ++ +I + F +L ++
Sbjct: 303 AGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 215 (80.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 49/171 (28%), Positives = 88/171 (51%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E+ + H + VN ++ Q++ TG DD V LW + K I + ++ V +V
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVT 201
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F + + + +G IK+W+L + T+ GH S+T + G YL S ++D+ ++
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 261
Query: 126 LWDLR----RKGCIYTYRG--HSKSINSIR--FSPDGQWIASGGEDGVVRI 168
+WD+R ++ C+ ++G H+ N +R +SPDG IA+G D V +
Sbjct: 262 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Score = 200 (75.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWN 86
G +L + DK V +W + L GH++ V S G + + G G++K+W+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ +T + + +V F+ D + SG +D+ IK+WDLR+ YT RGH+ S+
Sbjct: 182 IRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 240
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
+ S +G ++ S D VR+
Sbjct: 241 GLSLSSEGSYLLSNAMDNTVRV 262
Score = 173 (66.0 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 43/157 (27%), Positives = 74/157 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWAL-GKSNCIMSLSGHSTPVESVQFGNGEET 72
H V C +G LA+ G D+ + LW + G + +L GHS V + +
Sbjct: 66 HEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRR 131
L + ++ +W+ + L GH S + S G L C+GS D +KLWD+R+
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
K I T++ ++ + ++ F+ I SGG D +++
Sbjct: 185 KAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 35/151 (23%), Positives = 70/151 (46%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
S Q+++ GG D + +W L ++ ++ GH+ V + + L + ++++W+
Sbjct: 206 SDQIIS-GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Query: 87 L--------AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+ V Q ++ + ++ + P G + +GS D F+ +WD + +Y
Sbjct: 265 VRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKL 324
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169
GH+ SIN + F PD I S D + +G
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSDKRLYMG 355
Score = 136 (52.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 37/121 (30%), Positives = 57/121 (47%)
Query: 51 IMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDF 108
IM LSGH V +F NG SAG I +WN+ TL GH ++ + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 109 HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIASGGEDGVVR 167
+ G L S S D + +WD + +GH+ +NS + G Q + +G +DG V+
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 168 I 168
+
Sbjct: 179 L 179
Score = 70 (29.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
L + S D TV WD+ K + + T + N+ + +TF++ + ++ GG +KV+
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW 221
Score = 57 (25.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
S D + WDL + L T ++ ++ L+ S G LL + ++V+ P
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Score = 49 (22.3 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 297 SSSADRTVNFWDLEKFS----LVSTTEKN----SSTIRRLTFSEGGECLLGGDTEGLKVY 348
S++ D TV WD+ F+ V + N + R ++S G + G + VY
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF-VY 311
Query: 349 GWE 351
W+
Sbjct: 312 VWD 314
Score = 42 (19.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 10/47 (21%), Positives = 20/47 (42%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
+ SADR V WD ++ ++ +I + F +L ++
Sbjct: 303 AGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 215 (80.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 49/171 (28%), Positives = 88/171 (51%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E+ + H + VN ++ Q++ TG DD V LW + K I + ++ V +V
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVT 201
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F + + + +G IK+W+L + T+ GH S+T + G YL S ++D+ ++
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 261
Query: 126 LWDLR----RKGCIYTYRG--HSKSINSIR--FSPDGQWIASGGEDGVVRI 168
+WD+R ++ C+ ++G H+ N +R +SPDG IA+G D V +
Sbjct: 262 VWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Score = 200 (75.5 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWN 86
G +L + DK V +W + L GH++ V S G + + G G++K+W+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ +T + + +V F+ D + SG +D+ IK+WDLR+ YT RGH+ S+
Sbjct: 182 IRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 240
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
+ S +G ++ S D VR+
Sbjct: 241 GLSLSSEGSYLLSNAMDNTVRV 262
Score = 173 (66.0 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 43/157 (27%), Positives = 74/157 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWAL-GKSNCIMSLSGHSTPVESVQFGNGEET 72
H V C +G LA+ G D+ + LW + G + +L GHS V + +
Sbjct: 66 HEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRR 131
L + ++ +W+ + L GH S + S G L C+GS D +KLWD+R+
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
K I T++ ++ + ++ F+ I SGG D +++
Sbjct: 185 KAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Score = 160 (61.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 35/151 (23%), Positives = 70/151 (46%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
S Q+++ GG D + +W L ++ ++ GH+ V + + L + ++++W+
Sbjct: 206 SDQIIS-GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Query: 87 L--------AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+ V Q ++ + ++ + P G + +GS D F+ +WD + +Y
Sbjct: 265 VRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKL 324
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169
GH+ SIN + F PD I S D + +G
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSDKRLYMG 355
Score = 136 (52.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 37/121 (30%), Positives = 57/121 (47%)
Query: 51 IMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDF 108
IM LSGH V +F NG SAG I +WN+ TL GH ++ + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 109 HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIASGGEDGVVR 167
+ G L S S D + +WD + +GH+ +NS + G Q + +G +DG V+
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 168 I 168
+
Sbjct: 179 L 179
Score = 70 (29.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
L + S D TV WD+ K + + T + N+ + +TF++ + ++ GG +KV+
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW 221
Score = 57 (25.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
S D + WDL + L T ++ ++ L+ S G LL + ++V+ P
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Score = 48 (22.0 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 297 SSSADRTVNFWDLEKFS----LVSTTEKN----SSTIRRLTFSEGGECLLGGDTEGLKVY 348
S++ D TV WD+ F+ V + N + R ++S G + G + VY
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF-VY 311
Query: 349 GWE 351
W+
Sbjct: 312 VWD 314
Score = 42 (19.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 10/47 (21%), Positives = 20/47 (42%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
+ SADR V WD ++ ++ +I + F +L ++
Sbjct: 303 AGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 198 (74.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 44/168 (26%), Positives = 75/168 (44%)
Query: 1 MRAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
M K E AH VN + + ++LA+G D+ LWAL + GH
Sbjct: 472 MMMKARSTE--RAHEKDVNSVCVSPND-KLLASGSQDRTAKLWALSDLRLLGVCRGHRRG 528
Query: 61 VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL 120
V SVQF ++ L + GS++IW++ + +T GH +S+ + F G L S
Sbjct: 529 VWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGS 588
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
D +KLW ++ C+ T H + ++ + + +G D + +
Sbjct: 589 DGLVKLWTIKTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITV 636
Score = 189 (71.6 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 51/170 (30%), Positives = 80/170 (47%)
Query: 14 HGASVNCLALGK-KSGQVLATGGDDKKVNLWAL----GKSNCIMSLSGHSTPVESVQFGN 68
HG + L++ + G + AT DK V +W + G+ +C+ +GHS V S+
Sbjct: 383 HGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSR 442
Query: 69 -GEETLSAGCQSGSIKIWNLAVPT---------VQRTLNGHKSSITSVDFHPYGDYLCSG 118
++ + +G Q ++K+W+L T + T H+ + SV P L SG
Sbjct: 443 MKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASG 502
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D KLW L + RGH + + S++FSP Q + S DG VRI
Sbjct: 503 SQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRI 552
Score = 178 (67.7 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 40/129 (31%), Positives = 58/129 (44%)
Query: 43 WALGKSNCIMSLSG-HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKS 101
W + C S HS PV S+ F L+ G G+IK+W++ L G
Sbjct: 90 WDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSG 149
Query: 102 SITSVDFHPYGD--YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159
+ V+FHP L S S D I++WDLR C+ H + ++ FSPDG + S
Sbjct: 150 VVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVS 209
Query: 160 GGEDGVVRI 168
G D + +
Sbjct: 210 SGRDKICSV 218
Score = 138 (53.6 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 35/105 (33%), Positives = 49/105 (46%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG--SIKIWNL 87
+LATGG D + LW + K C +L G S V V+F L S +I+IW+L
Sbjct: 120 LLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDL 179
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
L H S +T++ F P G L S D +WDL+ +
Sbjct: 180 RSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQ 224
Score = 136 (52.9 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 30/109 (27%), Positives = 54/109 (49%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEETLSAGCQSGSIKIWNL 87
Q+L + D V +W++ +C+ + GH V + F G + +S+G G +K+W +
Sbjct: 539 QILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSG-SDGLVKLWTI 597
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW-DLRRKGCI 135
RTL+ H+ + ++ + + +GS DS I +W D RK I
Sbjct: 598 KTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWTDKLRKTVI 646
Score = 129 (50.5 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 43/178 (24%), Positives = 85/178 (47%)
Query: 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ-FG 67
+ F+ + V + K +A + ++ ++ L ++C + L GH+ + S+ F
Sbjct: 338 QQFVGYNDDVLDVKFVGKDDTHIAVATNSSQLKVFELSTNSCQI-LHGHTDTILSIDVFR 396
Query: 68 NGEETLSAGC-QSGSIKIWNLAVPT--VQRTLNG--HKSSITSVDFHPYGD-YLCSGSLD 121
G ++ A C + S+++W + V + V G H +++ S+ ++ SGS D
Sbjct: 397 KG--SMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQD 454
Query: 122 SFIKLWDLRR----KGCIY-----TYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
+K+WDL +G + T R H K +NS+ SP+ + +ASG +D ++ A
Sbjct: 455 CTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWA 512
Score = 101 (40.6 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 27/118 (22%), Positives = 52/118 (44%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
L + D + +W L S C+ L H +PV ++ F TL + + +W+L
Sbjct: 165 LFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQ 224
Query: 91 TVQRTLNGHKS--SIT----SVDFHPYG---D--YLCSGSLDSFIKLWDLRRKGCIYT 137
V+RT+ +++ + S D+ G D +L + +++WD C++T
Sbjct: 225 KVKRTIPVYEAVEGVVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSSRCVFT 282
Score = 87 (35.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW-----E 351
S+SAD +V W ++ FS + T E + +++ ++ F G L+ ++GL V W E
Sbjct: 543 SASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGL-VKLWTIKTNE 601
Query: 352 PARQYDA-QPMGW---GKVQD-LAVTGT 374
R DA Q W G +D L VTG+
Sbjct: 602 CVRTLDAHQDKVWALHGGCRDELMVTGS 629
Score = 87 (35.7 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 26/108 (24%), Positives = 50/108 (46%)
Query: 64 VQFGNGEETLSAGCQSG-SIKIWNLAVPTVQRTLNGH-KSSITSVDFHPYGDYLCSGSLD 121
VQ E+ + C G I I ++ + ++ + IT+ P + L S S
Sbjct: 27 VQVSGDEQHIF--CTYGPKINILQISTGKIIHSIEQEDQEDITAFALSPDDEMLVSASRA 84
Query: 122 SFIKLWDLRRKGCIYTYRG-HSKSINSIRFSPDGQWIASGGEDGVVRI 168
++ WD +++ C ++R HS + S+ F +A+GG DG +++
Sbjct: 85 LLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKL 132
Score = 49 (22.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 294 LTTSSSADRTVNFWD--LEKFSLVSTTEKNSSTIRRLT 329
L + SAD T+ W L K ++ +T+K ++ + T
Sbjct: 624 LMVTGSADSTITVWTDKLRKTVIIKSTKKVDQSLFKFT 661
Score = 49 (22.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 13/51 (25%), Positives = 19/51 (37%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
L S S DRT W L L+ + + + FS + L +G
Sbjct: 498 LLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADG 548
Score = 43 (20.2 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 30/101 (29%), Positives = 37/101 (36%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTE--KNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPAR 354
S S D TV WDL + + K ST R C+ D L G +
Sbjct: 450 SGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDK--LLASGSQ--- 504
Query: 355 QYDAQPMGWGKVQDLAVTGTQLWFRRVGTWSHQDSGFSTLD 395
D W + DL + G RR G WS Q FS +D
Sbjct: 505 --DRTAKLWA-LSDLRLLGVCRGHRR-GVWSVQ---FSPVD 538
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 221 (82.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 47/125 (37%), Positives = 70/125 (56%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NG 69
+ H A V+C+ S LATG DK V LW+ + N + +GH PV S+ F NG
Sbjct: 422 YAGHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNG 480
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
+ SAG + +K+W+LA T+ + L GH SITS+ F P + S S+D+ +++WD+
Sbjct: 481 KYLASAG-EDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539
Query: 130 RRKGC 134
R C
Sbjct: 540 RSTCC 544
Score = 221 (82.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 45/137 (32%), Positives = 67/137 (48%)
Query: 32 ATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91
A+G D+ LW+ ++ + +GH V+ V+F L+ G ++++W+
Sbjct: 400 ASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 459
Query: 92 VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151
R GH+ + S+ F P G YL S D +KLWDL RGH+ SI S+ FS
Sbjct: 460 SVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFS 519
Query: 152 PDGQWIASGGEDGVVRI 168
PD IAS D VR+
Sbjct: 520 PDSGLIASASMDNSVRV 536
Score = 199 (75.1 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 41/141 (29%), Positives = 68/141 (48%)
Query: 23 LGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSI 82
L SG L + +D + W LG + GH+ PV V ++G +
Sbjct: 351 LADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTA 408
Query: 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS 142
++W+ R GH + + V FHP +YL +GS D ++LW ++ + + GH
Sbjct: 409 RLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHR 468
Query: 143 KSINSIRFSPDGQWIASGGED 163
+ S+ FSP+G+++AS GED
Sbjct: 469 GPVLSLSFSPNGKYLASAGED 489
Score = 163 (62.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 36/115 (31%), Positives = 54/115 (46%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GH PV S +F L + + SI+ W+L T GH + VD P+
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSL 397
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y SGS D +LW R + Y GH ++ ++F P+ ++A+G D VR+
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Score = 60 (26.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGWEPA 353
+ S D+TV W ++ + V + + L+FS G+ L G+ + LK+ W+ A
Sbjct: 443 TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKL--WDLA 498
Score = 47 (21.6 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 277 SRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSS 323
S TSL+ P S ++ S+S D +V WD+ + +T SS
Sbjct: 512 SITSLAFSPDSGLIA-----SASMDNSVRVWDIRS-TCCNTPADGSS 552
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 213 (80.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 40/139 (28%), Positives = 72/139 (51%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G + + D + LW+ + ++ GH+ PV QF ++ + +IW++
Sbjct: 430 GDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSM 489
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
R + GH S + V +HP +Y+ +GS D ++LWD++ C+ + GH + S
Sbjct: 490 DRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLS 549
Query: 148 IRFSPDGQWIASGGEDGVV 166
+ SPDG+++ASG EDG +
Sbjct: 550 LAMSPDGRYMASGDEDGTI 568
Score = 200 (75.5 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 38/141 (26%), Positives = 71/141 (50%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G A+ D+ +W++ + + ++GH + V+ VQ+ ++ G ++++W++
Sbjct: 472 GHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDV 531
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
R GH+S + S+ P G Y+ SG D I +WDL CI GH+ + S
Sbjct: 532 QTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWS 591
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ +S +G +ASG D V++
Sbjct: 592 LSYSGEGSLLASGSADCTVKL 612
Score = 174 (66.3 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 41/152 (26%), Positives = 69/152 (45%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
+++ H + V+C+ + ATG DK V LW + C+ GH + V S
Sbjct: 491 RIQPLRIMAGHLSDVDCVQWHPNCNYI-ATGSSDKTVRLWDVQTGECVRIFIGHRSMVLS 549
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
+ +++G + G+I +W+L+ L GH S + S+ + G L SGS D
Sbjct: 550 LAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCT 609
Query: 124 IKLWDLRRKGCIYTYR---GHSKSINSIRFSP 152
+KLWD+ + G+S + S+R P
Sbjct: 610 VKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFP 641
Score = 152 (58.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 37/147 (25%), Positives = 67/147 (45%)
Query: 23 LGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGS 81
+G+ L D ++ G+ + + L GHS PV S F G+ LS+ + +
Sbjct: 384 IGQAGSGALQAENDSSDQSIGPNGRRSYTLLL-GHSGPVYSATFSPPGDFVLSSSADT-T 441
Query: 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGH 141
I++W+ + GH + F P+G Y S S D ++W + R + GH
Sbjct: 442 IRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGH 501
Query: 142 SKSINSIRFSPDGQWIASGGEDGVVRI 168
++ +++ P+ +IA+G D VR+
Sbjct: 502 LSDVDCVQWHPNCNYIATGSSDKTVRL 528
Score = 73 (30.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 291 CFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350
C + T SS D+TV WD++ V + S + L S G + GD +G + W
Sbjct: 514 CNYIATGSS-DKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGT-IMMW 571
Query: 351 E 351
+
Sbjct: 572 D 572
Score = 58 (25.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 294 LTTSSSADRTVNFWDLEKFS-LVSTTEKN--SSTIRRL-TF 330
L S SAD TV WD+ + L EKN S+ +R L TF
Sbjct: 600 LLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTF 640
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 56/210 (26%), Positives = 101/210 (48%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
+ F H + LA ++ATGG D K LW +G + L GH V +
Sbjct: 61 DSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLA 120
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F + L++G G ++I++ + T++ L+G + I V +HP G + +GS D +
Sbjct: 121 FSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLW 180
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLS 185
+W+ ++ + + GH+ ++ F+PDG+ I +G +D + + T SIH+V
Sbjct: 181 MWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNP--KTCESIHIVK-- 236
Query: 186 LVHPLGTPPPQYTSSVPFSHNTSLRKSFTK 215
HP T + + + + N+SL S +K
Sbjct: 237 -GHPYHT---EGLTCLDINSNSSLAISGSK 262
Score = 177 (67.4 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 43/166 (25%), Positives = 73/166 (43%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + CL + S ++ G D V++ + + SL+ H+ VE V+F T+
Sbjct: 241 HTEGLTCLDINSNSSLAIS-GSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATI 299
Query: 74 SAGCQSGSIK---IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
G K IW+L T R + H+ +TS+ + YL +G + + +WD
Sbjct: 300 PLAATGGMDKKLIIWDLQHST-PRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSL 358
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN 176
C++TY GH ++ +I S + +I S D R+ S N
Sbjct: 359 LGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESSEFQN 404
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 207 (77.9 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 46/148 (31%), Positives = 68/148 (45%)
Query: 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80
++L KK LA+ D V LW+L + + GHS V V + L C
Sbjct: 286 VSLDKKDVN-LASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDH 344
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
S ++W+L GH + + FH G +G LD+F ++WDLR CI G
Sbjct: 345 SWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG 404
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRI 168
H K I + FSP+G +A+G D ++
Sbjct: 405 HLKEIYGLNFSPNGYHVATGSGDNTCKV 432
Score = 199 (75.1 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 47/164 (28%), Positives = 71/164 (43%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E D H V + SG+ L T D LW L I+ GHS V +
Sbjct: 313 EPVADIEGHSMRV-ARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIA 371
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F G ++W+L L GH I ++F P G ++ +GS D+ K
Sbjct: 372 FHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCK 431
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSPD-GQWIASGGEDGVVRI 168
+WDLR++ CIYT H + ++F P+ G ++ +G D +I
Sbjct: 432 VWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKI 475
Score = 181 (68.8 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 47/151 (31%), Positives = 73/151 (48%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS--------AGCQ 78
+ ++LAT LW++ N + +L GHST V ++ F + + T+S A C
Sbjct: 241 NSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVF-HPKATVSLDKKDVNLASCA 299
Query: 79 S-GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
+ GS+K+W+L + GH + V +HP G +L + D +LWDL + I
Sbjct: 300 ADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILH 359
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
GHSK + I F DG +GG D R+
Sbjct: 360 QEGHSKGVYDIAFHTDGSLAGTGGLDAFGRV 390
Score = 178 (67.7 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 43/156 (27%), Positives = 70/156 (44%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V +A G + TGG D +W L CIM L GH + + F +
Sbjct: 363 HSKGVYDIAF-HTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHV 421
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRK 132
+ G + K+W+L T+ H++ +T V F P +G++L +G+ D+ K+W
Sbjct: 422 ATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGW 481
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH + + S DGQ IA+ D ++
Sbjct: 482 SPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKL 517
Score = 132 (51.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 31/124 (25%), Positives = 54/124 (43%)
Query: 44 ALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI 103
+L N S G P+ F + L+ C SG K+W++ + TL GH +++
Sbjct: 216 SLRSLNNFCSQIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNV 275
Query: 104 TSVDFHPYGDY--------LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ 155
++ FHP L S + D +KLW L + GHS + + + P G+
Sbjct: 276 GAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGR 335
Query: 156 WIAS 159
++ +
Sbjct: 336 FLGT 339
Score = 126 (49.4 bits), Expect = 0.00023, P = 0.00023
Identities = 30/102 (29%), Positives = 45/102 (44%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIW 85
+G +ATG D +W L + CI ++ H V V+F N L G + KIW
Sbjct: 417 NGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIW 476
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ +TL GH+ + +D G + + S D KLW
Sbjct: 477 THPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLW 518
Score = 60 (26.2 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 20/81 (24%), Positives = 33/81 (40%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEG-GECLLGGDTEGL-KVY---GWE 351
+ S D T WDL + + T + + + + F G LL G + K++ GW
Sbjct: 423 TGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWS 482
Query: 352 PARQYDAQPMGWGKVQDLAVT 372
P + GKV L ++
Sbjct: 483 PLKTLAGHE---GKVMGLDIS 500
Score = 50 (22.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYG--WE 351
D + WDLE + E +S + + F G L G T GL +G W+
Sbjct: 343 DHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGS--LAG-TGGLDAFGRVWD 392
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 220 (82.5 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 52/170 (30%), Positives = 79/170 (46%)
Query: 6 EKAEDFMAHGASVNCLAL--GKKSGQ----VLATGGDDKKVNLWALGKSNCIMSLSGHST 59
E + H + V +AL G K+ + +A+GG D V LW I ++GH
Sbjct: 294 ELKQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMP 353
Query: 60 P-VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG 118
V V F L+ C S ++W+L T GH + + +H G L +G
Sbjct: 354 HRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTG 413
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
LD+F ++WDLR CI GH ++ + FSP+G IA+G +D +I
Sbjct: 414 GLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKI 463
Score = 199 (75.1 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
SG+ LAT D LW L + ++ GH+ PV + + + L G ++W+
Sbjct: 364 SGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWD 423
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
L L GH ++ VDF P G ++ +GS D+ K+WDLRR+ +YT H+ I+
Sbjct: 424 LRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLIS 483
Query: 147 SIRFSPD-GQWIASGGEDGVVRI 168
+++ + G ++ + D +I
Sbjct: 484 DVKYQQECGSFLVTCSYDSTTKI 506
Score = 196 (74.1 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 48/156 (30%), Positives = 73/156 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V+CL+ G VL TGG D +W L CIM L GH V V F +
Sbjct: 394 HAKPVHCLSY-HSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHI 452
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPY-GDYLCSGSLDSFIKLWDLRRK 132
+ G Q + KIW+L T+ H + I+ V + G +L + S DS K+W +
Sbjct: 453 ATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTW 512
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T +GH + S+ +P+ Q+IA+ D ++
Sbjct: 513 QPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKL 548
Score = 163 (62.4 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 43/159 (27%), Positives = 73/159 (45%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG----EET- 72
V+ A + S +L T LW++ +L GH++ V V G EE
Sbjct: 264 VSSAAFSEDSS-LLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENV 322
Query: 73 --LSAGCQSGSIKIWNLAVPTVQRTLNGHKSS-ITSVDFHPYGDYLCSGSLDSFIKLWDL 129
+++G G++K+W + GH ++ V FHP G +L + DS +LWDL
Sbjct: 323 VAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDL 382
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+K + GH+K ++ + + DG + +GG D R+
Sbjct: 383 EQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRV 421
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 28/102 (27%), Positives = 46/102 (45%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSI-KIW 85
+G +ATG D +W L + + ++ H+ + V++ + C S KIW
Sbjct: 448 NGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIW 507
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ +TL GH + + SVD P Y+ + S D KLW
Sbjct: 508 SNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLW 549
Score = 123 (48.4 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 34/126 (26%), Positives = 54/126 (42%)
Query: 51 IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP 110
+ S G + PV S F L SG K+W++ +++TL GH S + V P
Sbjct: 254 LCSQVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRP 313
Query: 111 --YGDY-----LCSGSLDSFIKLWDLRRKGCIYTYRGHSKS-INSIRFSPDGQWIASGGE 162
D + SG D +KLW + I GH ++ + F P G+++A+
Sbjct: 314 GVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACY 373
Query: 163 DGVVRI 168
D R+
Sbjct: 374 DSSWRL 379
Score = 55 (24.4 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYG--WE 351
D + WDLE+ + V E ++ + L++ G L+ G GL +G W+
Sbjct: 374 DSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTG---GLDAFGRVWD 423
Score = 47 (21.6 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGEC 336
F + T S D T WDL + V T +++ I + + + EC
Sbjct: 450 FHIATGSQ-DNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQ--EC 491
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 196 (74.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H +N +A+ +++ATG D+ LW+ + + +GH + VQF ++ L
Sbjct: 489 HDKDINSVAVSPND-KLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQIL 547
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ G++K+W L + +T GH +S+ + F G L SG D +KLW ++
Sbjct: 548 ATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNE 607
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T GH I + + + + D + +
Sbjct: 608 CVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITL 642
Score = 180 (68.4 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 42/144 (29%), Positives = 68/144 (47%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSG-HSTPVESVQFGNGEETLSAG-CQSGSIKIWN 86
+VL TG + W ++ C+ + H PV ++ F + L+ G C S +IKIW+
Sbjct: 80 EVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDS-TIKIWD 138
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS 144
+ L G + V+FHP L S S+D I++WDL C+ GH +
Sbjct: 139 MIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSA 198
Query: 145 INSIRFSPDGQWIASGGEDGVVRI 168
+ S+ F+ DG + S G D + +
Sbjct: 199 VTSLAFTADGNTLISSGRDKICMV 222
Score = 180 (68.4 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 39/132 (29%), Positives = 62/132 (46%)
Query: 52 MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPY 111
M+ GH + SV ++ ++ G Q K+W+ ++ GHK I V F P
Sbjct: 484 MTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPV 543
Query: 112 GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGAS 171
L + S D +KLW L+ C+ T+ GH S+ I F G + SGG DG++++
Sbjct: 544 DQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTI 603
Query: 172 FHLTNTSIHVVD 183
TN + +D
Sbjct: 604 --KTNECVKTLD 613
Score = 155 (59.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 35/118 (29%), Positives = 54/118 (45%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNG 69
F H + C+ Q+LAT D + LW L +C+ + GH V + F G
Sbjct: 528 FTGHKRGIWCVQFSPVD-QILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRG 586
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ LS G G +K+W + +TL+GH+ I + + D + + S DS I LW
Sbjct: 587 TQLLSGG-SDGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLW 643
Score = 145 (56.1 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 46/176 (26%), Positives = 76/176 (43%)
Query: 14 HGASVNCLALGK-KSGQVLATGGDDKKVNLWALGKSN---CIMSLSGHSTPVESVQFGNG 69
+G + LAL + G + + DK + +W + K C+ GH+ V +V
Sbjct: 383 YGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRL 442
Query: 70 EET-LSAGCQSGSIKIWNL----------AV---PTV---QRTLNGHKSSITSVDFHPYG 112
+E+ + Q +IK+WN+ A+ P Q T GH I SV P
Sbjct: 443 KESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINSVAVSPND 502
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ +GS D KLW + + GH + I ++FSP Q +A+ DG +++
Sbjct: 503 KLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKL 558
Score = 113 (44.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEETLSAGCQSGSIKIWNLAVPTVQRT 95
D K+ +W L S C+ L GH + V S+ F +G +S+G + +WNL RT
Sbjct: 175 DYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSG-RDKICMVWNLKTRESIRT 233
Query: 96 LNGHKSSITSV------DFHPYG------DYLCSGSLDSFIKLWDLRRKGCIYT 137
+ ++S +V DF G +L +GS +K+W++ C+Y+
Sbjct: 234 IPIYESVEAAVLLPEQGDFSQLGVKKQGLHFLTAGS-KGVLKVWEVATAACVYS 286
Score = 102 (41.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 33/169 (19%), Positives = 75/169 (44%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESV 64
VE E+ H + +C+ + +++ + T + + + L+G++ V V
Sbjct: 294 VESEEEASEHSLT-HCMLVPERNE--IVTVSVEHNIVFYDAQTLQLRKQLAGYNDEVLDV 350
Query: 65 QF-GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
+F G G+ + S +K++ L+ Q L GH +I ++D G S + D
Sbjct: 351 KFLGPGDSHIVVATNSPQLKVFELSTSHCQ-ILYGHTETILALDVFRKGLMFVSCAKDKS 409
Query: 124 IKLWDLRRKG---CIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
I++W + + G C+ GH+ + ++ S ++ + +D +++
Sbjct: 410 IRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLKESFVVTSSQDCTIKV 458
Score = 94 (38.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 293 ILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL 345
IL TSS AD T+ W L+ FS + T E + +++ ++ F G LL G ++GL
Sbjct: 546 ILATSS-ADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGL 597
Score = 84 (34.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 100 KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG-HSKSINSIRFSPDGQWIA 158
+ ITS P + L +GS +K W+ R C+ T++ H + ++ F +A
Sbjct: 67 QEDITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLA 126
Query: 159 SGGEDGVVRI 168
+GG D ++I
Sbjct: 127 TGGCDSTIKI 136
Score = 50 (22.7 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 46/235 (19%), Positives = 89/235 (37%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
L + S DR W SL+ + I + FS + L +G LK++G +
Sbjct: 504 LIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQD 563
Query: 353 ---ARQYDAQPMGWGKVQDLAVTGTQLWFRR----VGTWSHQDSG-FSTLDSYSAGSPVS 404
+ ++ K+ ++ GTQL + W+ + + TLD +
Sbjct: 564 FSCLKTFEGHDASVLKIIFVS-RGTQLLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGL 622
Query: 405 TMGRERDQIVPMNLSAPIGL--DMEQFLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAV 462
++ D +V + + I L D+ + + Q + + M E EL + + H+K
Sbjct: 623 HTNKQDDMVVTASSDSSITLWKDVTEIEQEEAQAKREEQIMKEQELSNLL---HEKRYL- 678
Query: 463 LRNRQRSLGLVYMAVNNKNMEAGIDTALSMNDGTVMIDLFKSMLGQGYKKCVKVY 517
++LGL + I L +DG ++ + L + K+ V +
Sbjct: 679 -----KALGLAISLDRPHTVLTVIKAILKESDGRKRLEENIARLRKDQKEAVLTF 728
Score = 40 (19.1 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 25/91 (27%), Positives = 39/91 (42%)
Query: 696 GQEKPSVDFEVPTKES-EIYPTY--VRKG---PDMYGPQSQYAPTKENDYGSQSGDS-ML 748
G++K + + + T+ES P Y V P+ G SQ K+ + +G +L
Sbjct: 215 GRDKICMVWNLKTRESIRTIPIYESVEAAVLLPEQ-GDFSQLGVKKQGLHFLTAGSKGVL 273
Query: 749 GDHEAETHEPSRYSMKPIPYSPSTPREYAKE 779
E T YS +P+P+ P E A E
Sbjct: 274 KVWEVAT-AACVYS-QPVPFEPVESEEEASE 302
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 214 (80.4 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 48/171 (28%), Positives = 87/171 (50%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E+ + H + VN ++ Q++ TG DD V LW + K + + ++ V +V
Sbjct: 169 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVT 227
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F + + + +G IK+W+L + T+ GH S+T + G YL S ++D+ ++
Sbjct: 228 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 287
Query: 126 LWDLR----RKGCIYTYRG--HSKSINSIR--FSPDGQWIASGGEDGVVRI 168
+WD+R ++ C+ ++G H+ N +R +SPDG IA G D V +
Sbjct: 288 IWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYV 338
Score = 202 (76.2 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 42/142 (29%), Positives = 71/142 (50%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWN 86
G +L + DK V +W + L GH++ V S G + + G G++K+W+
Sbjct: 148 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 207
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ +T + + +V F+ D + SG +D+ IK+WDLR+ YT RGH+ S+
Sbjct: 208 IRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 266
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
+ S +G ++ S D VRI
Sbjct: 267 GLSLSSEGSYLLSNAMDNTVRI 288
Score = 168 (64.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 42/157 (26%), Positives = 73/157 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWAL-GKSNCIMSLSGHSTPVESVQFGNGEET 72
H V C G LA+ G D+ + LW + G + +L GHS V + +
Sbjct: 92 HEGEVYCCKF-HPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 150
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRR 131
L + ++ +W+ + L GH S + S G L C+GS D +KLWD+R+
Sbjct: 151 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 210
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
K + T++ ++ + ++ F+ I SGG D +++
Sbjct: 211 KAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKV 246
Score = 155 (59.6 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
S Q+++ GG D + +W L ++ ++ GH+ V + + L + +++IW+
Sbjct: 232 SDQIIS-GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWD 290
Query: 87 L--------AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+ V Q ++ + ++ + P G + GS D F+ +WD + +Y
Sbjct: 291 VRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKL 350
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169
GH+ S+N + F P+ I S D + +G
Sbjct: 351 PGHAGSVNELAFHPEEPIILSASSDKRLYMG 381
Score = 131 (51.2 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 51 IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDFH 109
IM LSGH V +F TL++ I +WN+ TL GH ++ + ++
Sbjct: 86 IMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 145
Query: 110 PYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIASGGEDGVVRI 168
G L S S D + +WD + +GH+ +NS + G Q + +G +DG V++
Sbjct: 146 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 205
Score = 71 (30.1 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
L + S D TV WD+ K + V T + N+ + +TF++ + ++ GG +KV+
Sbjct: 193 LVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW 247
Score = 58 (25.5 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 23/84 (27%), Positives = 35/84 (41%)
Query: 297 SSSADRTVNFWDLEKFS----LVSTTEKN----SSTIRRLTFSEGGECLLGGDTEGLKVY 348
S++ D TV WD+ F+ V + N + R ++S G + GG + VY
Sbjct: 279 SNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRF-VY 337
Query: 349 GWEPA--RQYDAQPMGWGKVQDLA 370
W+ R P G V +LA
Sbjct: 338 VWDTTSRRILYKLPGHAGSVNELA 361
Score = 56 (24.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 13/57 (22%), Positives = 25/57 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
S D + WDL + L T ++ ++ L+ S G LL + ++++ P
Sbjct: 237 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRP 293
Score = 42 (19.8 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 10/45 (22%), Positives = 19/45 (42%)
Query: 299 SADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
SADR V WD ++ ++ ++ L F +L ++
Sbjct: 331 SADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSD 375
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 218 (81.8 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 52/158 (32%), Positives = 75/158 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEET 72
H SV +A G V TGG D +W + CIM L GH+ + SV++ NG E
Sbjct: 337 HSKSVADVAF-HPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEM 395
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
++ G S+K+W+L + T+ H S +T V G YL S S D +K+W
Sbjct: 396 IT-GSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGW 454
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
+ +GH I + SPDGQW+ S D ++ A
Sbjct: 455 QPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLWA 492
Score = 182 (69.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 38/132 (28%), Positives = 63/132 (47%)
Query: 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96
D V LW+L + + I L H V V F L+ C + ++++L
Sbjct: 275 DGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQ 334
Query: 97 NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQW 156
GH S+ V FHP G +G D + ++WD+R CI GH+K I+S+ + P+G
Sbjct: 335 EGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYE 394
Query: 157 IASGGEDGVVRI 168
+ +G D +++
Sbjct: 395 MITGSSDNSMKV 406
Score = 159 (61.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 40/143 (27%), Positives = 68/143 (47%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIW 85
+G LAT D ++ L ++ GHS V V F +G L+ G ++W
Sbjct: 307 NGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYG-RVW 365
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI 145
++ L+GH I SV++ P G + +GS D+ +K+WDLR + YT H+ +
Sbjct: 366 DMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVV 425
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
+R GQ++ S D +++
Sbjct: 426 TRVRADAAGQYLVSASFDCTLKM 448
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 215 (80.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 49/171 (28%), Positives = 88/171 (51%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E+ + H + VN ++ Q++ TG DD V LW + K I + ++ V +V
Sbjct: 142 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVT 200
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F + + + +G IK+W+L + T+ GH S+T + G YL S ++D+ ++
Sbjct: 201 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 260
Query: 126 LWDLR----RKGCIYTYRG--HSKSINSIR--FSPDGQWIASGGEDGVVRI 168
+WD+R ++ C+ ++G H+ N +R +SPDG IA+G D V +
Sbjct: 261 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 311
Score = 200 (75.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWN 86
G +L + DK V +W + L GH++ V S G + + G G++K+W+
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ +T + + +V F+ D + SG +D+ IK+WDLR+ YT RGH+ S+
Sbjct: 181 IRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 239
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
+ S +G ++ S D VR+
Sbjct: 240 GLSLSSEGSYLLSNAMDNTVRV 261
Score = 173 (66.0 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 43/157 (27%), Positives = 74/157 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWAL-GKSNCIMSLSGHSTPVESVQFGNGEET 72
H V C +G LA+ G D+ + LW + G + +L GHS V + +
Sbjct: 65 HEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRR 131
L + ++ +W+ + L GH S + S G L C+GS D +KLWD+R+
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 183
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
K I T++ ++ + ++ F+ I SGG D +++
Sbjct: 184 KAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 35/151 (23%), Positives = 70/151 (46%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
S Q+++ GG D + +W L ++ ++ GH+ V + + L + ++++W+
Sbjct: 205 SDQIIS-GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 263
Query: 87 L--------AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+ V Q ++ + ++ + P G + +GS D F+ +WD + +Y
Sbjct: 264 VRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKL 323
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169
GH+ SIN + F PD I S D + +G
Sbjct: 324 PGHAGSINEVAFHPDEPIIISASSDKRLYMG 354
Score = 136 (52.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 37/121 (30%), Positives = 57/121 (47%)
Query: 51 IMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDF 108
IM LSGH V +F NG SAG I +WN+ TL GH ++ + +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHY 117
Query: 109 HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIASGGEDGVVR 167
+ G L S S D + +WD + +GH+ +NS + G Q + +G +DG V+
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 168 I 168
+
Sbjct: 178 L 178
Score = 70 (29.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
L + S D TV WD+ K + + T + N+ + +TF++ + ++ GG +KV+
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW 220
Score = 57 (25.1 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
S D + WDL + L T ++ ++ L+ S G LL + ++V+ P
Sbjct: 210 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 266
Score = 49 (22.3 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 297 SSSADRTVNFWDLEKFS----LVSTTEKN----SSTIRRLTFSEGGECLLGGDTEGLKVY 348
S++ D TV WD+ F+ V + N + R ++S G + G + VY
Sbjct: 252 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF-VY 310
Query: 349 GWE 351
W+
Sbjct: 311 VWD 313
Score = 40 (19.1 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTF 330
+ SADR V WD ++ ++ +I + F
Sbjct: 302 AGSADRFVYVWDTTSRRILYKLPGHAGSINEVAF 335
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 205 (77.2 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 44/138 (31%), Positives = 63/138 (45%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
LA+ D V LW+L + + GH+ V V + L C S ++W+L
Sbjct: 295 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 354
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
GH + + FH G +G LD+F ++WDLR CI GH K I I F
Sbjct: 355 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 414
Query: 151 SPDGQWIASGGEDGVVRI 168
SP+G IA+G D ++
Sbjct: 415 SPNGYHIATGSGDNTCKV 432
Score = 201 (75.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 46/164 (28%), Positives = 71/164 (43%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E D H V + SG+ L T D+ LW L I+ GHS V +
Sbjct: 313 EPVADIEGHTVRV-ARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIA 371
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F G ++W+L L GH I ++F P G ++ +GS D+ K
Sbjct: 372 FHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCK 431
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
+WDLR++ C+YT H + ++F P G ++ +G D +I
Sbjct: 432 VWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKI 475
Score = 191 (72.3 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 44/156 (28%), Positives = 71/156 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V +A + G + TGG D +W L CIM L GH + + F +
Sbjct: 363 HSMGVYDIAF-HQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 421
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRK 132
+ G + K+W+L T+ H++ +T V F P +GD+L +G+ D+ K+W
Sbjct: 422 ATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGW 481
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH + + S DGQ IA+ D ++
Sbjct: 482 SPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 517
Score = 164 (62.8 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS--------AGCQ 78
+ ++LAT LW++ + + +L GH+T V ++ F + + T+S A C
Sbjct: 241 NSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVF-HPKSTVSLDQKDVNLASCA 299
Query: 79 S-GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
+ GS+K+W+L + GH + V +HP G +L + D +LWDL + I
Sbjct: 300 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 359
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
GHS + I F DG +GG D R+
Sbjct: 360 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRV 390
Score = 129 (50.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 30/124 (24%), Positives = 55/124 (44%)
Query: 44 ALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI 103
+L N S G P+ F + L+ C SG K+W++ ++ TL GH +++
Sbjct: 216 SLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNV 275
Query: 104 TSVDFHPYGDY--------LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ 155
++ FHP L S + D +KLW L + GH+ + + + P G+
Sbjct: 276 GAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGR 335
Query: 156 WIAS 159
++ +
Sbjct: 336 FLGT 339
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 29/103 (28%), Positives = 48/103 (46%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG--NGEETLSAGCQSGSIKI 84
+G +ATG D +W L + C+ ++ H V V+F +G+ L+ G + KI
Sbjct: 417 NGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLT-GAYDNTAKI 475
Query: 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
W + +TL GH+ + +D G + + S D KLW
Sbjct: 476 WTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 61 (26.5 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 23/96 (23%), Positives = 39/96 (40%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE-GGECLLGGDTEGL-KVY---GWE 351
+ S D T WDL + V T + + + + F G+ LL G + K++ GW
Sbjct: 423 TGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWS 482
Query: 352 PARQ---YDAQPMGWGKVQDLAVTGTQLWFRRVGTW 384
P + ++ + MG D + T + R W
Sbjct: 483 PLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 57 (25.1 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYG--WE 351
DR+ WDLE + E +S + + F + G L G T GL +G W+
Sbjct: 343 DRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS--LAG-TGGLDAFGRVWD 392
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 214 (80.4 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 48/171 (28%), Positives = 88/171 (51%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E+ + H + VN ++ Q++ TG DD V LW + K + + ++ V +V
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVT 201
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F + + + +G IK+W+L + T+ GH S+T + G YL S ++D+ ++
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 261
Query: 126 LWDLR----RKGCIYTYRG--HSKSINSIR--FSPDGQWIASGGEDGVVRI 168
+WD+R ++ C+ ++G H+ N +R +SPDG IA+G D V +
Sbjct: 262 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 312
Score = 201 (75.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWN 86
G +L + DK V +W + L GH++ V S G + + G G++K+W+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ +T + + +V F+ D + SG +D+ IK+WDLR+ YT RGH+ S+
Sbjct: 182 IRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 240
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
+ S +G ++ S D VR+
Sbjct: 241 GLSLSSEGSYLLSNAMDNTVRV 262
Score = 172 (65.6 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 42/157 (26%), Positives = 74/157 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWAL-GKSNCIMSLSGHSTPVESVQFGNGEET 72
H V C +G LA+ G D+ + LW + G + +L GHS V + +
Sbjct: 66 HEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRR 131
L + ++ +W+ + L GH S + S G L C+GS D +KLWD+R+
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
K + T++ ++ + ++ F+ I SGG D +++
Sbjct: 185 KAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 35/151 (23%), Positives = 70/151 (46%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
S Q+++ GG D + +W L ++ ++ GH+ V + + L + ++++W+
Sbjct: 206 SDQIIS-GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264
Query: 87 L--------AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+ V Q ++ + ++ + P G + +GS D F+ +WD + +Y
Sbjct: 265 VRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKL 324
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169
GH+ SIN + F PD I S D + +G
Sbjct: 325 PGHAGSINEVAFHPDEPIILSASSDKRLYMG 355
Score = 136 (52.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 37/121 (30%), Positives = 57/121 (47%)
Query: 51 IMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDF 108
IM LSGH V +F NG SAG I +WN+ TL GH ++ + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 109 HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIASGGEDGVVR 167
+ G L S S D + +WD + +GH+ +NS + G Q + +G +DG V+
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 168 I 168
+
Sbjct: 179 L 179
Score = 71 (30.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
L + S D TV WD+ K + V T + N+ + +TF++ + ++ GG +KV+
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW 221
Score = 57 (25.1 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
S D + WDL + L T ++ ++ L+ S G LL + ++V+ P
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Score = 49 (22.3 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 297 SSSADRTVNFWDLEKFS----LVSTTEKN----SSTIRRLTFSEGGECLLGGDTEGLKVY 348
S++ D TV WD+ F+ V + N + R ++S G + G + VY
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF-VY 311
Query: 349 GWE 351
W+
Sbjct: 312 VWD 314
Score = 41 (19.5 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 10/47 (21%), Positives = 20/47 (42%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
+ SADR V WD ++ ++ +I + F +L ++
Sbjct: 303 AGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSD 349
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 221 (82.9 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 43/136 (31%), Positives = 69/136 (50%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
L + +D V LW+L C++ GH+ PV QF +G ++W
Sbjct: 538 LLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY 597
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
R GH + +T FHP +Y+ +GS D ++LWD+ C+ + GH I+S+ F
Sbjct: 598 QPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAF 657
Query: 151 SPDGQWIASGGEDGVV 166
SP+G+++A+G DG V
Sbjct: 658 SPNGRFLATGATDGRV 673
Score = 212 (79.7 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 42/141 (29%), Positives = 70/141 (49%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G +GG D+ LWA + +GH V +F ++ G ++++W++
Sbjct: 577 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDV 636
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
R GHK I S+ F P G +L +G+ D + LWD+ + +GH+ +I +
Sbjct: 637 LNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYA 696
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+RFS DG+ +ASG D VR+
Sbjct: 697 LRFSRDGEILASGSMDNTVRL 717
Score = 194 (73.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 38/118 (32%), Positives = 59/118 (50%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A V C S + ATG D+ V LW + NC+ +GH P+ S+ F
Sbjct: 603 FAGHLADVTCTRFHPNSNYI-ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNG 661
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
L+ G G + +W++ + L GH +I ++ F G+ L SGS+D+ ++LWD
Sbjct: 662 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWD 719
Score = 167 (63.8 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 35/115 (30%), Positives = 51/115 (44%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GHS PV F L + + G++++W+L T GH + F PYG
Sbjct: 519 LYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 578
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y SG D +LW + + GH + RF P+ +IA+G D VR+
Sbjct: 579 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRL 633
Score = 153 (58.9 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153
+ L GH + F P +YL S S D ++LW L+ C+ Y+GH+ + +FSP
Sbjct: 517 KILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 576
Query: 154 GQWIASGGEDGVVRIGASFHLTNTSI---HVVDLSLV--HP 189
G + SGG D V R+ A+ H I H+ D++ HP
Sbjct: 577 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHP 617
Score = 81 (33.6 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
+ SADRTV WD+ + V + I L FS G L G T+G +V W+
Sbjct: 624 TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDG-RVLLWD 677
Score = 76 (31.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 24/91 (26%), Positives = 39/91 (42%)
Query: 268 SGTCVPVSVSRTS-LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326
+G CV + + L SP F+ T + D V WD+ +V + ++ TI
Sbjct: 638 NGNCVRIFTGHKGPIHSLAFSPNGRFLAT--GATDGRVLLWDIGHGLMVGELKGHTDTIY 695
Query: 327 RLTFSEGGECLLGGDTEGLKVYGWEPARQYD 357
L FS GE L G + V W+ + ++
Sbjct: 696 ALRFSRDGEILASGSMDNT-VRLWDAVKAFE 725
Score = 50 (22.7 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 294 LTTSSSADRTVNFWDLEK-FSLVSTTEKNSSTIRRLTFSEGGECLLGG 340
+ S S D TV WD K F + T + ++T + E + LL G
Sbjct: 705 ILASGSMDNTVRLWDAVKAFEDLETDDFTTAT-GHINLPENSQDLLLG 751
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 218 (81.8 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 42/136 (30%), Positives = 68/136 (50%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
L + +D V LW+L C++ GH+ PV QF +G ++W
Sbjct: 558 LLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY 617
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
R GH + + FHP +Y+ +GS D ++LWD+ C+ + GH I+S+ F
Sbjct: 618 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 677
Query: 151 SPDGQWIASGGEDGVV 166
SP+G+++A+G DG V
Sbjct: 678 SPNGRFLATGATDGRV 693
Score = 214 (80.4 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 42/141 (29%), Positives = 70/141 (49%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G +GG D+ LWA + +GH V +F ++ G ++++W++
Sbjct: 597 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
R GHK I S+ F P G +L +G+ D + LWD+ + +GH+ ++ S
Sbjct: 657 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCS 716
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+RFS DG+ +ASG D VR+
Sbjct: 717 LRFSRDGEILASGSMDNTVRL 737
Score = 204 (76.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A VNC S V ATG D+ V LW + NC+ +GH P+ S+ F
Sbjct: 623 FAGHLADVNCTRFHPNSNYV-ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 681
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
L+ G G + +W++ + L GH ++ S+ F G+ L SGS+D+ ++LWD
Sbjct: 682 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 175 (66.7 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 35/115 (30%), Positives = 52/115 (45%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GHS PV F L + + G++++W+L T GH + F PYG
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 598
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y SG D +LW + + GH +N RF P+ ++A+G D VR+
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 653
Score = 156 (60.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153
+ L GH + F P +YL S S D ++LW L+ C+ Y+GH+ + +FSP
Sbjct: 537 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 596
Query: 154 GQWIASGGEDGVVRIGASFHLTNTSI---HVVDLSLV--HP 189
G + SGG D V R+ A+ H I H+ D++ HP
Sbjct: 597 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP 637
Score = 86 (35.3 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
+ SADRTV WD+ + V + I LTFS G L G T+G +V W+
Sbjct: 644 TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD 697
Score = 74 (31.1 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 23/91 (25%), Positives = 39/91 (42%)
Query: 268 SGTCVPVSVSRTS-LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326
+G CV + + L SP F+ T + D V WD+ +V + ++ T+
Sbjct: 658 NGNCVRIFTGHKGPIHSLTFSPNGRFLAT--GATDGRVLLWDIGHGLMVGELKGHTDTVC 715
Query: 327 RLTFSEGGECLLGGDTEGLKVYGWEPARQYD 357
L FS GE L G + V W+ + ++
Sbjct: 716 SLRFSRDGEILASGSMDNT-VRLWDAVKAFE 745
Score = 53 (23.7 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 294 LTTSSSADRTVNFWDLEK-FSLVSTTEKNSSTIRRLTFSEGG-ECLLG 339
+ S S D TV WD K F V T + ++T + E E LLG
Sbjct: 725 ILASGSMDNTVRLWDAVKAFEDVETDDFTTAT-GHINLPENSQELLLG 771
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 213 (80.0 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 48/166 (28%), Positives = 86/166 (51%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E+ + H + VN ++ Q++ TG DD V LW + K I + ++ V +V
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVT 201
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F + + + +G IK+W+L + T+ GH S+T + G YL S ++D+ ++
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 261
Query: 126 LWDLR----RKGCIYTYRG--HSKSINSIR--FSPDGQWIASGGED 163
+WD+R ++ C+ ++G H+ N +R +SPDG IA+G D
Sbjct: 262 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSAD 307
Score = 200 (75.5 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWN 86
G +L + DK V +W + L GH++ V S G + + G G++K+W+
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ +T + + +V F+ D + SG +D+ IK+WDLR+ YT RGH+ S+
Sbjct: 182 IRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 240
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
+ S +G ++ S D VR+
Sbjct: 241 GLSLSSEGSYLLSNAMDNTVRV 262
Score = 176 (67.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 43/157 (27%), Positives = 75/157 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWAL-GKSNCIMSLSGHSTPVESVQFGNGEET 72
H V C +G LA+ G D+ + LW++ G + +L GHS V + +
Sbjct: 66 HEGEVYCCKF-HPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRR 131
L + ++ +W+ + L GH S + S G L C+GS D +KLWD+R+
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
K I T++ ++ + ++ F+ I SGG D +++
Sbjct: 185 KAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKV 220
Score = 131 (51.2 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 51 IMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDF 108
IM LSGH V +F NG SAG I +W++ TL GH ++ + +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDR-LILLWSVYGDCDNYATLKGHSGAVMELHY 118
Query: 109 HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIASGGEDGVVR 167
+ G L S S D + +WD + +GH+ +NS + G Q + +G +DG V+
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 168 I 168
+
Sbjct: 179 L 179
Score = 70 (29.7 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
L + S D TV WD+ K + + T + N+ + +TF++ + ++ GG +KV+
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW 221
Score = 57 (25.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
S D + WDL + L T ++ ++ L+ S G LL + ++V+ P
Sbjct: 211 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 267
Score = 47 (21.6 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 15/62 (24%), Positives = 26/62 (41%)
Query: 297 SSSADRTVNFWDLEKFS----LVSTTEKN----SSTIRRLTFSEGGECLLGGDTEGLKVY 348
S++ D TV WD+ F+ V + N + R ++S G + G + +Y
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSF-LY 311
Query: 349 GW 350
W
Sbjct: 312 PW 313
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 215 (80.7 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 49/171 (28%), Positives = 88/171 (51%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E+ + H + VN ++ Q++ TG DD V LW + K I + ++ V +V
Sbjct: 142 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVT 200
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F + + + +G IK+W+L + T+ GH S+T + G YL S ++D+ ++
Sbjct: 201 FNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVR 260
Query: 126 LWDLR----RKGCIYTYRG--HSKSINSIR--FSPDGQWIASGGEDGVVRI 168
+WD+R ++ C+ ++G H+ N +R +SPDG IA+G D V +
Sbjct: 261 VWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYV 311
Score = 200 (75.5 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 41/142 (28%), Positives = 71/142 (50%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN-GEETLSAGCQSGSIKIWN 86
G +L + DK V +W + L GH++ V S G + + G G++K+W+
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ +T + + +V F+ D + SG +D+ IK+WDLR+ YT RGH+ S+
Sbjct: 181 IRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 239
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
+ S +G ++ S D VR+
Sbjct: 240 GLSLSSEGSYLLSNAMDNTVRV 261
Score = 173 (66.0 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 43/157 (27%), Positives = 74/157 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWAL-GKSNCIMSLSGHSTPVESVQFGNGEET 72
H V C +G LA+ G D+ + LW + G + +L GHS V + +
Sbjct: 65 HEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRR 131
L + ++ +W+ + L GH S + S G L C+GS D +KLWD+R+
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 183
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
K I T++ ++ + ++ F+ I SGG D +++
Sbjct: 184 KAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKV 219
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 40/160 (25%), Positives = 73/160 (45%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
S Q+++ GG D + +W L ++ ++ GH+ V + + L + ++++W+
Sbjct: 205 SDQIIS-GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 263
Query: 87 L--------AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+ V Q ++ + ++ + P G + +GS D F+ +WD + +Y
Sbjct: 264 VRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKL 323
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTS 178
GH+ SIN + F PD I E G RIG H TS
Sbjct: 324 PGHAGSINEVAFHPDEPII----ETGFHRIGQGGHELLTS 359
Score = 136 (52.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 37/121 (30%), Positives = 57/121 (47%)
Query: 51 IMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDF 108
IM LSGH V +F NG SAG I +WN+ TL GH ++ + +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHY 117
Query: 109 HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIASGGEDGVVR 167
+ G L S S D + +WD + +GH+ +NS + G Q + +G +DG V+
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 168 I 168
+
Sbjct: 178 L 178
Score = 70 (29.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
L + S D TV WD+ K + + T + N+ + +TF++ + ++ GG +KV+
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW 220
Score = 57 (25.1 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
S D + WDL + L T ++ ++ L+ S G LL + ++V+ P
Sbjct: 210 SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP 266
Score = 52 (23.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 24/105 (22%), Positives = 41/105 (39%)
Query: 297 SSSADRTVNFWDLEKFS----LVSTTEKN----SSTIRRLTFSEGGECLLGGDTEGLKVY 348
S++ D TV WD+ F+ V + N + R ++S G + G + VY
Sbjct: 252 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRF-VY 310
Query: 349 GWEPA--RQYDAQPMGWGKVQDLAVTGTQ----LWFRRVGTWSHQ 387
W+ R P G + ++A + F R+G H+
Sbjct: 311 VWDTTSRRILYKLPGHAGSINEVAFHPDEPIIETGFHRIGQGGHE 355
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 218 (81.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 42/136 (30%), Positives = 68/136 (50%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
L + +D V LW+L C++ GH+ PV QF +G ++W
Sbjct: 318 LLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY 377
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
R GH + + FHP +Y+ +GS D ++LWD+ C+ + GH I+S+ F
Sbjct: 378 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 437
Query: 151 SPDGQWIASGGEDGVV 166
SP+G+++A+G DG V
Sbjct: 438 SPNGRFLATGATDGRV 453
Score = 214 (80.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 42/141 (29%), Positives = 70/141 (49%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G +GG D+ LWA + +GH V +F ++ G ++++W++
Sbjct: 357 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 416
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
R GHK I S+ F P G +L +G+ D + LWD+ + +GH+ ++ S
Sbjct: 417 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCS 476
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+RFS DG+ +ASG D VR+
Sbjct: 477 LRFSRDGEILASGSMDNTVRL 497
Score = 204 (76.9 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A VNC S V ATG D+ V LW + NC+ +GH P+ S+ F
Sbjct: 383 FAGHLADVNCTRFHPNSNYV-ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 441
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
L+ G G + +W++ + L GH ++ S+ F G+ L SGS+D+ ++LWD
Sbjct: 442 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 175 (66.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 35/115 (30%), Positives = 52/115 (45%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GHS PV F L + + G++++W+L T GH + F PYG
Sbjct: 299 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 358
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y SG D +LW + + GH +N RF P+ ++A+G D VR+
Sbjct: 359 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 413
Score = 156 (60.0 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153
+ L GH + F P +YL S S D ++LW L+ C+ Y+GH+ + +FSP
Sbjct: 297 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 356
Query: 154 GQWIASGGEDGVVRIGASFHLTNTSI---HVVDLSLV--HP 189
G + SGG D V R+ A+ H I H+ D++ HP
Sbjct: 357 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP 397
Score = 86 (35.3 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
+ SADRTV WD+ + V + I LTFS G L G T+G +V W+
Sbjct: 404 TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD 457
Score = 74 (31.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 23/91 (25%), Positives = 39/91 (42%)
Query: 268 SGTCVPVSVSRTS-LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326
+G CV + + L SP F+ T + D V WD+ +V + ++ T+
Sbjct: 418 NGNCVRIFTGHKGPIHSLTFSPNGRFLAT--GATDGRVLLWDIGHGLMVGELKGHTDTVC 475
Query: 327 RLTFSEGGECLLGGDTEGLKVYGWEPARQYD 357
L FS GE L G + V W+ + ++
Sbjct: 476 SLRFSRDGEILASGSMDNT-VRLWDAVKAFE 505
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 202 (76.2 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 52/158 (32%), Positives = 82/158 (51%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F+ H +V +A+ Q+++ G + V LW + + +L+ S SV F
Sbjct: 812 FVGHTGTVLSVAISSDGRQIVS--GSIEAVKLWDAATGDLLKTLA--SGFAGSVAFSPDS 867
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
++AG + G I IW+ A T+Q+TL H +I S+ F P L + S DS IK WD+
Sbjct: 868 RQIAAGFKDGKIFIWD-AAGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDIT 926
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
G + GHSK + ++ SPDG+ IASG D +++
Sbjct: 927 IGG-VQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKL 963
Score = 171 (65.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 40/140 (28%), Positives = 64/140 (45%)
Query: 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN 68
++ + H V + L G+V+A+G DK + LW + +L+GH VE V F
Sbjct: 931 QEAVGHSKHVTTMVLSP-DGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSL 989
Query: 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
+ C S ++KIW+ A VQ + T V P G ++ SG + IKLWD
Sbjct: 990 DNRQI-VSCSSEAVKIWDAATGKVQNSFESD-DVFTIVAVSPDGKHIASGHCNGRIKLWD 1047
Query: 129 LRRKGCIYTYRGHSKSINSI 148
+ + T G+ +S+
Sbjct: 1048 MATGSLLKTMAGYRSKFDSL 1067
Score = 155 (59.6 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 43/146 (29%), Positives = 65/146 (44%)
Query: 21 LALGKKSGQVLATGGDDKKVNLW-ALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQS 79
+A S Q+ A G D K+ +W A G +L H + S+ F + L
Sbjct: 861 VAFSPDSRQI-AAGFKDGKIFIWDAAGTLQ--KTLERHPGAIMSIAFSPDVKQLVTCSTD 917
Query: 80 GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR 139
+IK W++ + VQ + GH +T++ P G + SGS D IKLWD T
Sbjct: 918 STIKRWDITIGGVQEAV-GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLT 976
Query: 140 GHSKSINSIRFSPDGQWIASGGEDGV 165
GH ++ + FS D + I S + V
Sbjct: 977 GHLDTVEKVVFSLDNRQIVSCSSEAV 1002
Score = 154 (59.3 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 42/156 (26%), Positives = 71/156 (45%)
Query: 15 GASVNCLALGKKSGQVLATGG--DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
G ++ A Q+ A G D + L+ + L GHS ++ F +
Sbjct: 729 GYGLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQ 788
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
L G ++++WN +++T GH ++ SV G + SGS+++ +KLWD
Sbjct: 789 LVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIEA-VKLWDAATG 847
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T S S+ FSPD + IA+G +DG + I
Sbjct: 848 DLLKTLA--SGFAGSVAFSPDSRQIAAGFKDGKIFI 881
Score = 135 (52.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 38/155 (24%), Positives = 69/155 (44%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++ +A Q L T D + W + + GHS V ++ + +
Sbjct: 895 HPGAIMSIAFSPDVKQ-LVTCSTDSTIKRWDITIGG-VQEAVGHSKHVTTMVLSPDGKVI 952
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
++G +IK+W+ A +Q+TL GH ++ V F + S S ++ +K+WD G
Sbjct: 953 ASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSEA-VKIWDAAT-G 1010
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ + SPDG+ IASG +G +++
Sbjct: 1011 KVQNSFESDDVFTIVAVSPDGKHIASGHCNGRIKL 1045
Score = 111 (44.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 51 IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG-H--------KS 101
I +L+GHS V V F + +++G SG IK+W+ ++Q+TL+G H +
Sbjct: 613 IQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQE 672
Query: 102 SITSVDFHPYGDYLCSGSLDSFIKLWD 128
+ ++ F P + SG D + LWD
Sbjct: 673 QVKAMAFLPDSKLIISGYYDGSVMLWD 699
Score = 75 (31.5 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
S SAD+T+ WD L T + T+ ++ FS ++ +E +K+ W+ A
Sbjct: 954 SGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSEAVKI--WDAA 1008
Score = 50 (22.7 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 275 SVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS 331
++ T ++ L SP IL+TS+ DR + WD L +S +I FS
Sbjct: 1080 AIFNTQITGLVFSPDAKLILSTST--DRAIKLWDAATGDLQKRLPCHSDSIITDAFS 1134
Score = 48 (22.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 297 SSSADRTVNFWDLEK 311
++SAD+T+ W +EK
Sbjct: 1157 AASADKTIRVWSIEK 1171
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 205 (77.2 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 44/138 (31%), Positives = 63/138 (45%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
LA+ D V LW+L + + GH+ V V + L C S ++W+L
Sbjct: 296 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 355
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
GH + + FH G +G LD+F ++WDLR CI GH K I I F
Sbjct: 356 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 415
Query: 151 SPDGQWIASGGEDGVVRI 168
SP+G IA+G D ++
Sbjct: 416 SPNGYHIATGSGDNTCKV 433
Score = 201 (75.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 46/164 (28%), Positives = 71/164 (43%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E D H V + SG+ L T D+ LW L I+ GHS V +
Sbjct: 314 EPVADIEGHTVRV-ARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIA 372
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F G ++W+L L GH I ++F P G ++ +GS D+ K
Sbjct: 373 FHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCK 432
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
+WDLR++ C+YT H + ++F P G ++ +G D +I
Sbjct: 433 VWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKI 476
Score = 186 (70.5 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 43/156 (27%), Positives = 71/156 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V +A + G + TGG D +W L CIM L GH + + F +
Sbjct: 364 HSMGVYDIAF-HQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 422
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRK 132
+ G + K+W+L T+ H++ +T V F P +G++L +G+ D+ K+W
Sbjct: 423 ATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGW 482
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH + + S DGQ IA+ D ++
Sbjct: 483 SPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 518
Score = 169 (64.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 45/151 (29%), Positives = 72/151 (47%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS--------AGCQ 78
+ ++LAT LW++ N + +L GH+T V ++ F + + T+S A C
Sbjct: 242 NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF-HPKSTVSLDPKDVNLASCA 300
Query: 79 S-GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
+ GS+K+W+L + GH + V +HP G +L + D +LWDL + I
Sbjct: 301 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 360
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
GHS + I F DG +GG D R+
Sbjct: 361 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRV 391
Score = 128 (50.1 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 44 ALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI 103
+L N S G P+ F + L+ C SG K+W++ + TL GH +++
Sbjct: 217 SLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNV 276
Query: 104 TSVDFHPYGDY--------LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ 155
++ FHP L S + D +KLW L + GH+ + + + P G+
Sbjct: 277 GAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGR 336
Query: 156 WIAS 159
++ +
Sbjct: 337 FLGT 340
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 29/103 (28%), Positives = 47/103 (45%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG--NGEETLSAGCQSGSIKI 84
+G +ATG D +W L + C+ ++ H V V+F +G L+ G + KI
Sbjct: 418 NGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLT-GAYDNTAKI 476
Query: 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
W + +TL GH+ + +D G + + S D KLW
Sbjct: 477 WTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519
Score = 60 (26.2 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 22/96 (22%), Positives = 36/96 (37%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS--EGGECLLGGDTEGLKVY---GWE 351
+ S D T WDL + V T + + + + F G L G K++ GW
Sbjct: 424 TGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWS 483
Query: 352 PARQ---YDAQPMGWGKVQDLAVTGTQLWFRRVGTW 384
P + ++ + MG D + T + R W
Sbjct: 484 PLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519
Score = 57 (25.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYG--WE 351
DR+ WDLE + E +S + + F + G L G T GL +G W+
Sbjct: 344 DRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS--LAG-TGGLDAFGRVWD 393
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 204 (76.9 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 44/138 (31%), Positives = 63/138 (45%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
LA+ D V LW+L + + GH+ V V + L C S ++W+L
Sbjct: 295 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 354
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
GH + + FH G +G LD+F ++WDLR CI GH K I I F
Sbjct: 355 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISF 414
Query: 151 SPDGQWIASGGEDGVVRI 168
SP+G IA+G D ++
Sbjct: 415 SPNGYHIATGSGDNTCKV 432
Score = 200 (75.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 46/164 (28%), Positives = 70/164 (42%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E D H V + SG+ L T D+ LW L I+ GHS V +
Sbjct: 313 EPVADIEGHTVRV-ARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIA 371
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F G ++W+L L GH I + F P G ++ +GS D+ K
Sbjct: 372 FHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCK 431
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
+WDLR++ C+YT H + ++F P G ++ +G D +I
Sbjct: 432 VWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKI 475
Score = 191 (72.3 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 44/156 (28%), Positives = 71/156 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V +A + G + TGG D +W L CIM L GH + + F +
Sbjct: 363 HSMGVYDIAF-HQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHI 421
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRK 132
+ G + K+W+L T+ H++ +T V F P +GD+L +G+ D+ K+W
Sbjct: 422 ATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGW 481
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH + + S DGQ IA+ D ++
Sbjct: 482 SPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 517
Score = 164 (62.8 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS--------AGCQ 78
+ ++LAT LW++ + + +L GH+T V ++ F + + T+S A C
Sbjct: 241 NSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVF-HPKSTVSLDQKDVNLASCA 299
Query: 79 S-GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
+ GS+K+W+L + GH + V +HP G +L + D +LWDL + I
Sbjct: 300 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 359
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
GHS + I F DG +GG D R+
Sbjct: 360 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRV 390
Score = 129 (50.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 30/124 (24%), Positives = 55/124 (44%)
Query: 44 ALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI 103
+L N S G P+ F + L+ C SG K+W++ ++ TL GH +++
Sbjct: 216 SLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNV 275
Query: 104 TSVDFHPYGDY--------LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ 155
++ FHP L S + D +KLW L + GH+ + + + P G+
Sbjct: 276 GAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGR 335
Query: 156 WIAS 159
++ +
Sbjct: 336 FLGT 339
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 29/103 (28%), Positives = 48/103 (46%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG--NGEETLSAGCQSGSIKI 84
+G +ATG D +W L + C+ ++ H V V+F +G+ L+ G + KI
Sbjct: 417 NGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLT-GAYDNTAKI 475
Query: 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
W + +TL GH+ + +D G + + S D KLW
Sbjct: 476 WTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 61 (26.5 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 23/96 (23%), Positives = 39/96 (40%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE-GGECLLGGDTEGL-KVY---GWE 351
+ S D T WDL + V T + + + + F G+ LL G + K++ GW
Sbjct: 423 TGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWS 482
Query: 352 PARQ---YDAQPMGWGKVQDLAVTGTQLWFRRVGTW 384
P + ++ + MG D + T + R W
Sbjct: 483 PLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 57 (25.1 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYG--WE 351
DR+ WDLE + E +S + + F + G L G T GL +G W+
Sbjct: 343 DRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS--LAG-TGGLDAFGRVWD 392
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 212 (79.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 45/155 (29%), Positives = 76/155 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C+A+ + Q TG D+ + +W L +SL+GH + V V L
Sbjct: 202 HLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYL 260
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + +K W+L V R +GH S++ +D HP D L + S DS ++WD+R K
Sbjct: 261 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKA 320
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++T GH+ ++ ++R I +G D +R+
Sbjct: 321 SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRL 355
Score = 175 (66.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 41/139 (29%), Positives = 66/139 (47%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
VL T D +W + + +LSGH+ V +V+ E + G +I++W+L
Sbjct: 301 VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVA 360
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+ TL HK S+ +V HP SGS D+ IK W I GH+ IN++
Sbjct: 361 GKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLT 419
Query: 150 FSPDGQWIASGGEDGVVRI 168
+ DG + SG ++G + +
Sbjct: 420 VNSDGV-LVSGADNGTMHL 437
Score = 153 (58.9 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 38/152 (25%), Positives = 69/152 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++V + + +S + + G +DK+V W L + I GH + V + + L
Sbjct: 244 HISTVRGVIVSTRSPYLFSCG-EDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVL 302
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + +IW++ TL+GH +++ +V + +GS D+ I+LWDL
Sbjct: 303 VTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGK 362
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
T H KS+ ++ P ASG D +
Sbjct: 363 TRVTLTNHKKSVRAVVLHPRHYTFASGSPDNI 394
Score = 137 (53.3 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 42/159 (26%), Positives = 66/159 (41%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
+SGH V + G + G +IKIW+LA ++ +L GH S++ V
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173
YL S D +K WDL I Y GH ++ + P + + D RI
Sbjct: 259 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV-- 316
Query: 174 LTNTSIHVVDLSLVHPLGTPPPQYTSS--VPFSHNTSLR 210
T S+H + + + T Q + SH+T++R
Sbjct: 317 RTKASVHTLS-GHTNAVATVRCQAAEPQIITGSHDTTIR 354
Score = 52 (23.4 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 11/56 (19%), Positives = 23/56 (41%)
Query: 295 TTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350
T +S + + W S + +++ I LT + G + G D + ++ W
Sbjct: 385 TFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDW 440
Score = 42 (19.8 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 10/50 (20%), Positives = 18/50 (36%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLK 346
+ S D T+ WDL T + ++R + G + +K
Sbjct: 346 TGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIK 395
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 212 (79.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 45/155 (29%), Positives = 76/155 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C+A+ + Q TG D+ + +W L +SL+GH + V V L
Sbjct: 203 HLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYL 261
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + +K W+L V R +GH S++ +D HP D L + S DS ++WD+R K
Sbjct: 262 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKA 321
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++T GH+ ++ ++R I +G D +R+
Sbjct: 322 SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRL 356
Score = 175 (66.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 41/139 (29%), Positives = 66/139 (47%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
VL T D +W + + +LSGH+ V +V+ E + G +I++W+L
Sbjct: 302 VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVA 361
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+ TL HK S+ +V HP SGS D+ IK W I GH+ IN++
Sbjct: 362 GKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLT 420
Query: 150 FSPDGQWIASGGEDGVVRI 168
+ DG + SG ++G + +
Sbjct: 421 VNSDGV-LVSGADNGTMHL 438
Score = 153 (58.9 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 38/152 (25%), Positives = 69/152 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++V + + +S + + G +DK+V W L + I GH + V + + L
Sbjct: 245 HISTVRGVIVSTRSPYLFSCG-EDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVL 303
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + +IW++ TL+GH +++ +V + +GS D+ I+LWDL
Sbjct: 304 VTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGK 363
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
T H KS+ ++ P ASG D +
Sbjct: 364 TRVTLTNHKKSVRAVVLHPRHYTFASGSPDNI 395
Score = 137 (53.3 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 42/159 (26%), Positives = 66/159 (41%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
+SGH V + G + G +IKIW+LA ++ +L GH S++ V
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173
YL S D +K WDL I Y GH ++ + P + + D RI
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV-- 317
Query: 174 LTNTSIHVVDLSLVHPLGTPPPQYTSS--VPFSHNTSLR 210
T S+H + + + T Q + SH+T++R
Sbjct: 318 RTKASVHTLS-GHTNAVATVRCQAAEPQIITGSHDTTIR 355
Score = 52 (23.4 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 11/56 (19%), Positives = 23/56 (41%)
Query: 295 TTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350
T +S + + W S + +++ I LT + G + G D + ++ W
Sbjct: 386 TFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDW 441
Score = 42 (19.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 10/50 (20%), Positives = 18/50 (36%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLK 346
+ S D T+ WDL T + ++R + G + +K
Sbjct: 347 TGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIK 396
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 204 (76.9 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 44/155 (28%), Positives = 71/155 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C+A+ + TG +D + +W L +L+GH V V + L
Sbjct: 138 HLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYL 197
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + ++K W+L + R GH S + +V HP D + + DS IKLWD+R +
Sbjct: 198 FSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRI 257
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH IN ++ +P + S D VR+
Sbjct: 258 PVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRL 292
Score = 143 (55.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 38/154 (24%), Positives = 68/154 (44%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H +V +A+ + + + +DK V W L K+ I GH + V +V + +
Sbjct: 181 HVMTVRDVAVSDRHPYLFSVS-EDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLI 239
Query: 74 SAGCQSGSIKIWNLA--VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
+ + IK+W++ +P + TL GHK I V P + S S D+ ++LWD+
Sbjct: 240 ATAGRDSVIKLWDMRTRIPVI--TLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVA 297
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
+ H +S+ + P +AS D +
Sbjct: 298 GKTMKVLTHHKRSVRATALHPKEFSVASACTDDI 331
Score = 58 (25.5 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 14/65 (21%), Positives = 30/65 (46%)
Query: 295 TTSSSADRTVNFWDLEKFSLVSTTE-KNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
+ +S+ + W L + SL++ E + + I L+ ++ GGD L Y ++
Sbjct: 322 SVASACTDDIRSWGLAEGSLLTNFESEKTGIINTLSINQDDVLFAGGDNGVLSFYDYKSG 381
Query: 354 RQYDA 358
+Y +
Sbjct: 382 HKYQS 386
Score = 46 (21.3 bits), Expect = 8.6e-13, Sum P(3) = 8.6e-13
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 297 SSSADRTVNFWDLE--KFSLVSTTEKNS---STIRRLTFSEGGEC 336
SSS D TV WD+ K V T K S + + FS C
Sbjct: 283 SSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHPKEFSVASAC 327
Score = 37 (18.1 bits), Expect = 8.6e-13, Sum P(3) = 8.6e-13
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 550 GLTEGSLTAKFLSSR 564
GL EGSL F S +
Sbjct: 335 GLAEGSLLTNFESEK 349
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 212 (79.7 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 45/155 (29%), Positives = 76/155 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C+A+ + Q TG D+ + +W L +SL+GH + V V L
Sbjct: 204 HLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYL 262
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + +K W+L V R +GH S++ +D HP D L + S DS ++WD+R K
Sbjct: 263 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKA 322
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++T GH+ ++ ++R I +G D +R+
Sbjct: 323 SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRL 357
Score = 175 (66.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 41/139 (29%), Positives = 66/139 (47%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
VL T D +W + + +LSGH+ V +V+ E + G +I++W+L
Sbjct: 303 VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVA 362
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+ TL HK S+ +V HP SGS D+ IK W I GH+ IN++
Sbjct: 363 GKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLT 421
Query: 150 FSPDGQWIASGGEDGVVRI 168
+ DG + SG ++G + +
Sbjct: 422 VNSDGV-LVSGADNGTMHL 439
Score = 153 (58.9 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 38/152 (25%), Positives = 69/152 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++V + + +S + + G +DK+V W L + I GH + V + + L
Sbjct: 246 HISTVRGVIVSTRSPYLFSCG-EDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVL 304
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + +IW++ TL+GH +++ +V + +GS D+ I+LWDL
Sbjct: 305 VTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGK 364
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
T H KS+ ++ P ASG D +
Sbjct: 365 TRVTLTNHKKSVRAVVLHPRHYTFASGSPDNI 396
Score = 137 (53.3 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 42/159 (26%), Positives = 66/159 (41%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
+SGH V + G + G +IKIW+LA ++ +L GH S++ V
Sbjct: 201 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 260
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173
YL S D +K WDL I Y GH ++ + P + + D RI
Sbjct: 261 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV-- 318
Query: 174 LTNTSIHVVDLSLVHPLGTPPPQYTSS--VPFSHNTSLR 210
T S+H + + + T Q + SH+T++R
Sbjct: 319 RTKASVHTLS-GHTNAVATVRCQAAEPQIITGSHDTTIR 356
Score = 52 (23.4 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 11/56 (19%), Positives = 23/56 (41%)
Query: 295 TTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350
T +S + + W S + +++ I LT + G + G D + ++ W
Sbjct: 387 TFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDW 442
Score = 42 (19.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 10/50 (20%), Positives = 18/50 (36%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLK 346
+ S D T+ WDL T + ++R + G + +K
Sbjct: 348 TGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIK 397
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 217 (81.4 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 49/153 (32%), Positives = 83/153 (54%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG----EETLSA------- 75
+G+ +ATG +V L+++ + M+L GH+ V + + G E +SA
Sbjct: 217 NGETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGATLQESNVSAESVNLAT 276
Query: 76 GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI 135
G G + +W+L+ T TL+GH + VDFHP G +L S S D+ +LWD+ ++ +
Sbjct: 277 GGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEKRTEL 336
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
GHS+ + ++ F+ DG +AS G+D + RI
Sbjct: 337 LLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRI 369
Score = 183 (69.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 44/141 (31%), Positives = 69/141 (48%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
LATGG + +VNLW+L + + +LSGH+ V V F L++ + S ++W++
Sbjct: 274 LATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEKR 333
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS----KSIN 146
T GH + +V F+ G L S DS ++WDLR I GH K I
Sbjct: 334 TELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIY 393
Query: 147 SIRFSPDGQWIASGGEDGVVR 167
++ + DG + S DG ++
Sbjct: 394 ALDWGSDGHRVLSASADGWIK 414
Score = 145 (56.1 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 38/129 (29%), Positives = 66/129 (51%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSI-KIW 85
SG+ LA+ +D LW + K ++ GHS V +V F NG+ +L A SI +IW
Sbjct: 312 SGRFLASASEDTSWRLWDVEKRTELLLQEGHSRGVFAVSF-NGDGSLLASAGQDSIGRIW 370
Query: 86 NL----AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGH 141
+L + + ++GH I ++D+ G + S S D +IK WD+R+ H
Sbjct: 371 DLRTGRTIMILDGHMDGHIKPIYALDWGSDGHRVLSASADGWIKCWDVRKVQRTGGVGAH 430
Query: 142 SKSINSIRF 150
+ +++ +R+
Sbjct: 431 TSAVSDMRW 439
Score = 47 (21.6 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 28/116 (24%), Positives = 51/116 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQY 356
S+SAD + WD+ K ++S + + + +G L G +G+ + G + Q
Sbjct: 406 SASADGWIKCWDVRKVQRTGGVGAHTSAVSDMRWFKG----LDGPLDGVPL-GVDEKGQ- 459
Query: 357 DAQPMGWGKVQDLAVTGTQLWFRRVGTWSHQDSGFSTLDSYSAGS-PVSTMGRERD 411
A P G L +G +V +S D ++ + S S + PV+++ RD
Sbjct: 460 -AMPKKSGTF--LVSSGFD---HKVNIYSADD--WALVQSLSGHTGPVASVDVSRD 507
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 205 (77.2 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 44/138 (31%), Positives = 63/138 (45%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
LA+ D V LW+L + + GH+ V V + L C S ++W+L
Sbjct: 311 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 370
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
GH + + FH G +G LD+F ++WDLR CI GH K I I F
Sbjct: 371 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 430
Query: 151 SPDGQWIASGGEDGVVRI 168
SP+G IA+G D ++
Sbjct: 431 SPNGYHIATGSGDNTCKV 448
Score = 201 (75.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/164 (28%), Positives = 71/164 (43%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E D H V + SG+ L T D+ LW L I+ GHS V +
Sbjct: 329 EPVADIEGHTVRV-ARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIA 387
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F G ++W+L L GH I ++F P G ++ +GS D+ K
Sbjct: 388 FHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCK 447
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
+WDLR++ C+YT H + ++F P G ++ +G D +I
Sbjct: 448 VWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKI 491
Score = 186 (70.5 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 43/156 (27%), Positives = 71/156 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V +A + G + TGG D +W L CIM L GH + + F +
Sbjct: 379 HSMGVYDIAF-HQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 437
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRK 132
+ G + K+W+L T+ H++ +T V F P +G++L +G+ D+ K+W
Sbjct: 438 ATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGW 497
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH + + S DGQ IA+ D ++
Sbjct: 498 SPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 533
Score = 169 (64.5 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 45/151 (29%), Positives = 72/151 (47%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS--------AGCQ 78
+ ++LAT LW++ N + +L GH+T V ++ F + + T+S A C
Sbjct: 257 NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF-HPKSTVSLDQKDVNLASCA 315
Query: 79 S-GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
+ GS+K+W+L + GH + V +HP G +L + D +LWDL + I
Sbjct: 316 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 375
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
GHS + I F DG +GG D R+
Sbjct: 376 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRV 406
Score = 128 (50.1 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 44 ALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI 103
+L N S G P+ F + L+ C SG K+W++ + TL GH +++
Sbjct: 232 SLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNV 291
Query: 104 TSVDFHPYGDY--------LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ 155
++ FHP L S + D +KLW L + GH+ + + + P G+
Sbjct: 292 GAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGR 351
Query: 156 WIAS 159
++ +
Sbjct: 352 FLGT 355
Score = 123 (48.4 bits), Expect = 0.00050, P = 0.00050
Identities = 29/103 (28%), Positives = 47/103 (45%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG--NGEETLSAGCQSGSIKI 84
+G +ATG D +W L + C+ ++ H V V+F +G L+ G + KI
Sbjct: 433 NGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLT-GAYDNTAKI 491
Query: 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
W + +TL GH+ + +D G + + S D KLW
Sbjct: 492 WTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 534
Score = 60 (26.2 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 22/96 (22%), Positives = 36/96 (37%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS--EGGECLLGGDTEGLKVY---GWE 351
+ S D T WDL + V T + + + + F G L G K++ GW
Sbjct: 439 TGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWS 498
Query: 352 PARQ---YDAQPMGWGKVQDLAVTGTQLWFRRVGTW 384
P + ++ + MG D + T + R W
Sbjct: 499 PLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 534
Score = 57 (25.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYG--WE 351
DR+ WDLE + E +S + + F + G L G T GL +G W+
Sbjct: 359 DRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS--LAG-TGGLDAFGRVWD 408
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 205 (77.2 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 44/138 (31%), Positives = 63/138 (45%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
LA+ D V LW+L + + GH+ V V + L C S ++W+L
Sbjct: 313 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 372
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
GH + + FH G +G LD+F ++WDLR CI GH K I I F
Sbjct: 373 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 432
Query: 151 SPDGQWIASGGEDGVVRI 168
SP+G IA+G D ++
Sbjct: 433 SPNGYHIATGSGDNTCKV 450
Score = 201 (75.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/164 (28%), Positives = 71/164 (43%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E D H V + SG+ L T D+ LW L I+ GHS V +
Sbjct: 331 EPVADIEGHTVRV-ARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIA 389
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F G ++W+L L GH I ++F P G ++ +GS D+ K
Sbjct: 390 FHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCK 449
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
+WDLR++ C+YT H + ++F P G ++ +G D +I
Sbjct: 450 VWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKI 493
Score = 186 (70.5 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 43/156 (27%), Positives = 71/156 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V +A + G + TGG D +W L CIM L GH + + F +
Sbjct: 381 HSMGVYDIAF-HQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 439
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRK 132
+ G + K+W+L T+ H++ +T V F P +G++L +G+ D+ K+W
Sbjct: 440 ATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGW 499
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH + + S DGQ IA+ D ++
Sbjct: 500 SPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 535
Score = 169 (64.5 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 45/151 (29%), Positives = 72/151 (47%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS--------AGCQ 78
+ ++LAT LW++ N + +L GH+T V ++ F + + T+S A C
Sbjct: 259 NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF-HPKSTVSLDQKDVNLASCA 317
Query: 79 S-GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
+ GS+K+W+L + GH + V +HP G +L + D +LWDL + I
Sbjct: 318 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 377
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
GHS + I F DG +GG D R+
Sbjct: 378 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRV 408
Score = 128 (50.1 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 44 ALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI 103
+L N S G P+ F + L+ C SG K+W++ + TL GH +++
Sbjct: 234 SLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNV 293
Query: 104 TSVDFHPYGDY--------LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ 155
++ FHP L S + D +KLW L + GH+ + + + P G+
Sbjct: 294 GAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGR 353
Query: 156 WIAS 159
++ +
Sbjct: 354 FLGT 357
Score = 123 (48.4 bits), Expect = 0.00050, P = 0.00050
Identities = 29/103 (28%), Positives = 47/103 (45%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG--NGEETLSAGCQSGSIKI 84
+G +ATG D +W L + C+ ++ H V V+F +G L+ G + KI
Sbjct: 435 NGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLT-GAYDNTAKI 493
Query: 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
W + +TL GH+ + +D G + + S D KLW
Sbjct: 494 WTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 536
Score = 60 (26.2 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 22/96 (22%), Positives = 36/96 (37%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS--EGGECLLGGDTEGLKVY---GWE 351
+ S D T WDL + V T + + + + F G L G K++ GW
Sbjct: 441 TGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWS 500
Query: 352 PARQ---YDAQPMGWGKVQDLAVTGTQLWFRRVGTW 384
P + ++ + MG D + T + R W
Sbjct: 501 PLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 536
Score = 57 (25.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYG--WE 351
DR+ WDLE + E +S + + F + G L G T GL +G W+
Sbjct: 361 DRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS--LAG-TGGLDAFGRVWD 410
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 221 (82.9 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 53/167 (31%), Positives = 80/167 (47%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVESV 64
EK F AH + +A+ +L T DD + LW + + GH V SV
Sbjct: 88 EKVTQFEAHPDYIRSIAVHPSKPYIL-TSSDDLTIKLWNWDHNWKLEQTFEGHQHYVMSV 146
Query: 65 QFGNGE-ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS-ITSVDFHPYGD--YLCSGSL 120
F + T ++ C ++KIW+L TL H++ + VD++P D YL + S
Sbjct: 147 NFNPKDPNTFASACLDRTVKIWSLGSSQPNFTLIAHEAKGVNYVDYYPQADKPYLITSSD 206
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
D IK+WD + K C+ T GH +++ F P+ I SG EDG +R
Sbjct: 207 DKTIKVWDYQTKSCVATLEGHLSNVSFAIFHPELPIIVSGSEDGTIR 253
Score = 128 (50.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 33/132 (25%), Positives = 57/132 (43%)
Query: 39 KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG 98
K+ +W+ ++ + S+ PV + +F + + G I+++N
Sbjct: 36 KIEIWSYATNSLVKSIQVTELPVRAGKFIARKNWIVVGSDDFQIRVYNYNTGEKVTQFEA 95
Query: 99 HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI-YTYRGHSKSINSIRFSP-DGQW 156
H I S+ HP Y+ + S D IKLW+ + T+ GH + S+ F+P D
Sbjct: 96 HPDYIRSIAVHPSKPYILTSSDDLTIKLWNWDHNWKLEQTFEGHQHYVMSVNFNPKDPNT 155
Query: 157 IASGGEDGVVRI 168
AS D V+I
Sbjct: 156 FASACLDRTVKI 167
Score = 121 (47.7 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 29/143 (20%), Positives = 63/143 (44%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ G DD ++ ++ + H + S+ + + +IK+WN
Sbjct: 70 IVVGSDDFQIRVYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYILTSSDDLTIKLWNWDHN 129
Query: 91 -TVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIYTYRGH-SKSINS 147
+++T GH+ + SV+F+P + S LD +K+W L +T H +K +N
Sbjct: 130 WKLEQTFEGHQHYVMSVNFNPKDPNTFASACLDRTVKIWSLGSSQPNFTLIAHEAKGVNY 189
Query: 148 IRFSP--DGQWIASGGEDGVVRI 168
+ + P D ++ + +D +++
Sbjct: 190 VDYYPQADKPYLITSSDDKTIKV 212
Score = 63 (27.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
+SS D+T+ WD + S V+T E + S + F ++ G +G
Sbjct: 203 TSSDDKTIKVWDYQTKSCVATLEGHLSNVSFAIFHPELPIIVSGSEDG 250
Score = 49 (22.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 276 VSRTSLSIL-PQSPMLCFILTTSSSADRTVNFWDLEKFSL 314
+S S +I P+ P++ S S D T+ FW+ F L
Sbjct: 228 LSNVSFAIFHPELPII-----VSGSEDGTIRFWNSNTFKL 262
Score = 46 (21.3 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 297 SSSADRTVNFWDL----EKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S+ DRTV W L F+L++ K + + ++ + D + +KV+ ++
Sbjct: 158 SACLDRTVKIWSLGSSQPNFTLIAHEAKGVNYVDYYPQADKPYLITSSDDKTIKVWDYQ 216
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 210 (79.0 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 44/139 (31%), Positives = 72/139 (51%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
GQ +G D + LW + K GH+ V SV F + + +G + +IK+WN
Sbjct: 82 GQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWN- 140
Query: 88 AVPTVQRTLNG---HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS 144
+ + TL G H+ ++ + F P + SGS D+ +K+WD++ C +T H+
Sbjct: 141 TLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGY 200
Query: 145 INSIRFSPDGQWIASGGED 163
+N++ SPDG ASGG+D
Sbjct: 201 VNTVTISPDGSLCASGGKD 219
Score = 180 (68.4 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLW-ALGKSNCIMSLSG---HSTPVESVQF 66
F H V +A + Q+++ G D + +W LG+ C +L G H V ++F
Sbjct: 108 FKGHTQDVMSVAFSSDNRQIIS-GSRDATIKVWNTLGE--CKFTLEGPEAHQDWVSCIRF 164
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
T+ +G +KIW++ TL H + +V P G SG D+F L
Sbjct: 165 SPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACL 224
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
W+L +Y + +IN++ FSP+ W+++ +D ++
Sbjct: 225 WELSSGKPLYKLEARN-TINALAFSPNKYWLSAATDDKII 263
Score = 172 (65.6 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 45/166 (27%), Positives = 76/166 (45%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIM------SLSGHSTPVESVQ 65
+ H V +A+ ++ + + DK V +W L ++ SL GHS V+ V
Sbjct: 18 VGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVV 77
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
+ + +G ++++W++ R GH + SV F + SGS D+ IK
Sbjct: 78 ISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIK 137
Query: 126 LWDLRRKGCIYTYRG---HSKSINSIRFSPDGQWIASGGEDGVVRI 168
+W+ + C +T G H ++ IRFSP+ I SG D V+I
Sbjct: 138 VWNTLGE-CKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKI 182
Score = 151 (58.2 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 53 SLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAVPT-------VQRTLNGHKSSIT 104
SL GH+ V S+ +T+ + + ++ +W L PT R+L GH +
Sbjct: 16 SLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLT-PTDATSPGKAHRSLKGHSHFVQ 74
Query: 105 SVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG 164
V G + SGS D+ ++LWD+ + ++GH++ + S+ FS D + I SG D
Sbjct: 75 DVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDA 134
Query: 165 VVRI 168
+++
Sbjct: 135 TIKV 138
Score = 65 (27.9 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS-EGGECLLGG-DT 342
S S D V WD++ F T ++ + +T S +G C GG DT
Sbjct: 173 SGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDT 220
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 204 (76.9 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 44/138 (31%), Positives = 63/138 (45%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
LA+ D V LW+L + + GH+ V V + L C S ++W+L
Sbjct: 295 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQ 354
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
GH + + FH G +G LD+F ++WDLR CI GH K I I F
Sbjct: 355 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 414
Query: 151 SPDGQWIASGGEDGVVRI 168
SP+G IA+G D ++
Sbjct: 415 SPNGYHIATGSGDNTCKV 432
Score = 198 (74.8 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 42/143 (29%), Positives = 66/143 (46%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
SG+ L T D+ LW L I+ GHS V + F G ++W+
Sbjct: 333 SGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 392
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
L L GH I ++F P G ++ +GS D+ K+WDLR++ C+YT H +
Sbjct: 393 LRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVT 452
Query: 147 SIRFSP-DGQWIASGGEDGVVRI 168
++F P G ++ +G D +I
Sbjct: 453 GVKFEPIHGNFLLTGAYDNTAKI 475
Score = 186 (70.5 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 43/156 (27%), Positives = 71/156 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V +A + G + TGG D +W L CIM L GH + + F +
Sbjct: 363 HSMGVYDIAF-HQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 421
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP-YGDYLCSGSLDSFIKLWDLRRK 132
+ G + K+W+L T+ H++ +T V F P +G++L +G+ D+ K+W
Sbjct: 422 ATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGW 481
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH + + S DGQ IA+ D ++
Sbjct: 482 SPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 517
Score = 171 (65.3 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 45/151 (29%), Positives = 72/151 (47%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS--------AGCQ 78
+ ++LAT LW++ N + +L GH+T V ++ F + + T+S A C
Sbjct: 241 NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF-HPKSTVSLDQKDVNLASCA 299
Query: 79 S-GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
+ GS+K+W+L + GH + V +HP G +L + D +LWDL + I
Sbjct: 300 ADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 359
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
GHS + I F DG +GG D R+
Sbjct: 360 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRV 390
Score = 128 (50.1 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 44 ALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI 103
+L N S G P+ F + L+ C SG K+W++ + TL GH +++
Sbjct: 216 SLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNV 275
Query: 104 TSVDFHPYGDY--------LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ 155
++ FHP L S + D +KLW L + GH+ + + + P G+
Sbjct: 276 GAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGR 335
Query: 156 WIAS 159
++ +
Sbjct: 336 FLGT 339
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 29/103 (28%), Positives = 47/103 (45%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG--NGEETLSAGCQSGSIKI 84
+G +ATG D +W L + C+ ++ H V V+F +G L+ G + KI
Sbjct: 417 NGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLT-GAYDNTAKI 475
Query: 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
W + +TL GH+ + +D G + + S D KLW
Sbjct: 476 WTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 60 (26.2 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 22/96 (22%), Positives = 36/96 (37%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS--EGGECLLGGDTEGLKVY---GWE 351
+ S D T WDL + V T + + + + F G L G K++ GW
Sbjct: 423 TGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWS 482
Query: 352 PARQ---YDAQPMGWGKVQDLAVTGTQLWFRRVGTW 384
P + ++ + MG D + T + R W
Sbjct: 483 PLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 57 (25.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYG--WE 351
DR+ WDLE + E +S + + F + G L G T GL +G W+
Sbjct: 343 DRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS--LAG-TGGLDAFGRVWD 392
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 210 (79.0 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 40/141 (28%), Positives = 73/141 (51%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ +A+G D + ++ + + +L GH+ PV S+ F + L G +K++++
Sbjct: 182 GKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDV 241
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
V TL+GH S + V F G + S S D+ +K+WD + C++T+ H+ +
Sbjct: 242 THSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWG 301
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+R+SP +AS ED + I
Sbjct: 302 VRYSPGNDKVASASEDKSLNI 322
Score = 169 (64.5 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 39/156 (25%), Positives = 76/156 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V +A+ GQ +A+ D + LW + LS + +VQF + +
Sbjct: 84 HALGVVSVAVSS-DGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPCNKYV 142
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSIT-SVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+G G I ++++ ++TL+ T S+ + P G Y+ SG++D I ++D+
Sbjct: 143 ISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAG 202
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH+ + S+ FSP+ Q + + +DG +++
Sbjct: 203 KVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKL 238
Score = 155 (59.6 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 41/142 (28%), Positives = 68/142 (47%)
Query: 31 LATGGDDKKVNLWALGKSNCIM---SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
L TGG D V +W L + N + L GH+ V SV + +T+++ ++ +W+
Sbjct: 55 LVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDA 114
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS-KSIN 146
+ L+ + +V F P Y+ SG D I ++ + T + K
Sbjct: 115 RSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTL 174
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
SI +SPDG++IASG DG++ I
Sbjct: 175 SIAYSPDGKYIASGAIDGIITI 196
Score = 153 (58.9 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 36/137 (26%), Positives = 68/137 (49%)
Query: 33 TGGDDKKVNLWALGKSNCIMSLSGHSTPVE-SVQFGNGEETLSAGCQSGSIKIWNLAVPT 91
+G +D K++++++ +L + S+ + + +++G G I I+++A
Sbjct: 144 SGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGK 203
Query: 92 VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151
V +TL GH + S+ F P L + S D +KL+D+ + T GH+ + + FS
Sbjct: 204 VVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFS 263
Query: 152 PDGQWIASGGEDGVVRI 168
DG+ AS D V+I
Sbjct: 264 EDGKHFASSSSDNSVKI 280
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 30/114 (26%), Positives = 51/114 (44%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V L S Q+L T DD + L+ + S+ + +LSGH++ V V F +
Sbjct: 211 HAMPVRSLCFSPNS-QLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHF 269
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
++ S+KIW+ + T H + V + P D + S S D + ++
Sbjct: 270 ASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 58 (25.5 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 13/57 (22%), Positives = 28/57 (49%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG-DTEGLKVYGWEP 352
SSS+D +V WD + + T +++ + + +S G + + + + L +Y P
Sbjct: 271 SSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIYYCPP 327
Score = 51 (23.0 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 280 SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG 339
SL P S +L LT S D + +D+ +V T ++S + + FSE G+
Sbjct: 217 SLCFSPNSQLL---LTASD--DGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFAS 271
Query: 340 GDTEGLKVYGWEPARQ 355
++ V W+ + +
Sbjct: 272 SSSDN-SVKIWDTSER 286
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 207 (77.9 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LA+G D +N++ + + +L GH+ P+ S+ F + L G IKI+++
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+ TL+GH S + +V F P + S S D +K+WD+ + C++T+ H +
Sbjct: 220 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWG 279
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
++++ +G I S G+D + I
Sbjct: 280 VKYNGNGSKIVSVGDDQEIHI 300
Score = 181 (68.8 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 37/139 (26%), Positives = 67/139 (48%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
+ A+ D + LW L I S+ ++ F + L+ G G + I+ +
Sbjct: 78 IAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVES 137
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+ +L+ I S+ + P G YL SG++D I ++D+ ++T GH+ I S+
Sbjct: 138 GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 197
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSPD Q + + +DG ++I
Sbjct: 198 FSPDSQLLVTASDDGYIKI 216
Score = 165 (63.1 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 43/148 (29%), Positives = 69/148 (46%)
Query: 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80
LA S Q LATG KVN++ + SL + S+ + + L++G G
Sbjct: 112 LAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
I I+++A + TL GH I S+ F P L + S D +IK++D++ T G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRI 168
H+ + ++ F PD S D V++
Sbjct: 231 HASWVLNVAFCPDDTHFVSSSSDKSVKV 258
Score = 145 (56.1 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 13 AHGASVNCLALG---KKSGQVLATGGDDKKVNLWALG--KSNCIMSLSGHSTPVESVQFG 67
AH ++ +A G K++ + + TG D V +W K + SL GH V SV
Sbjct: 14 AHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDIS 73
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ ++ I++W+L ++++ ++ F P YL +G+ + ++
Sbjct: 74 HTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIF 133
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ Y+ K I SI +SPDG+++ASG DG++ I
Sbjct: 134 GVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 174
Score = 138 (53.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 70/300 (23%), Positives = 124/300 (41%)
Query: 57 HSTPVESVQFGNGE----ETLSAGCQSGSIKIWNLAVPTV--QRTLNGHKSSITSVDFHP 110
H + SV +G+ + ET+ G +K+W + Q +L GH+ + SVD
Sbjct: 15 HDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISH 74
Query: 111 YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-G 169
S SLD+ I+LWDL I + ++ FSPD Q++A+G G V I G
Sbjct: 75 TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFG 134
Query: 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTR 229
S+ ++ +P +Y +S ++ T G+ T +
Sbjct: 135 VESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-GKLLHT-LEGHAMP 192
Query: 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPM 289
I S D +L T A+ Y I+ + N +GT + +++ P
Sbjct: 193 IRSLTFSPDS----QLLVT-ASDDGYIKIYDVQHA-NLAGTLSGHASWVLNVAFCPDDTH 246
Query: 290 LCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
F+ SSS+D++V WD+ + V T + + + ++ G ++ GD + + +Y
Sbjct: 247 --FV---SSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 207 (77.9 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LA+G D +N++ + + +L GH+ P+ S+ F + L G IKI+++
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+ TL+GH S + +V F P + S S D +K+WD+ + C++T+ H +
Sbjct: 220 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWG 279
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
++++ +G I S G+D + I
Sbjct: 280 VKYNGNGSKIVSVGDDQEIHI 300
Score = 181 (68.8 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 37/139 (26%), Positives = 67/139 (48%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
+ A+ D + LW L I S+ ++ F + L+ G G + I+ +
Sbjct: 78 IAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVES 137
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+ +L+ I S+ + P G YL SG++D I ++D+ ++T GH+ I S+
Sbjct: 138 GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 197
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSPD Q + + +DG ++I
Sbjct: 198 FSPDSQLLVTASDDGYIKI 216
Score = 165 (63.1 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 43/148 (29%), Positives = 69/148 (46%)
Query: 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80
LA S Q LATG KVN++ + SL + S+ + + L++G G
Sbjct: 112 LAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
I I+++A + TL GH I S+ F P L + S D +IK++D++ T G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRI 168
H+ + ++ F PD S D V++
Sbjct: 231 HASWVLNVAFCPDDTHFVSSSSDKSVKV 258
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 40/161 (24%), Positives = 74/161 (45%)
Query: 13 AHGASVNCLALG---KKSGQVLATGGDDKKVNLWALGKSNCIM--SLSGHSTPVESVQFG 67
AH ++ +A G K++ + + TG D V +W + SL GH V SV
Sbjct: 14 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDIS 73
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ ++ I++W+L ++++ ++ F P YL +G+ + ++
Sbjct: 74 HTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIF 133
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ Y+ K I SI +SPDG+++ASG DG++ I
Sbjct: 134 GVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 174
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 70/300 (23%), Positives = 123/300 (41%)
Query: 57 HSTPVESVQFGNGE----ETLSAGCQSGSIKIWNLAVPTV--QRTLNGHKSSITSVDFHP 110
H + SV +G + ET+ G +K+W + Q +L GH+ + SVD
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH 74
Query: 111 YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-G 169
S SLD+ I+LWDL I + ++ FSPD Q++A+G G V I G
Sbjct: 75 TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFG 134
Query: 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTR 229
S+ ++ +P +Y +S ++ T G+ T +
Sbjct: 135 VESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-GKLLHT-LEGHAMP 192
Query: 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPM 289
I S D +L T A+ Y I+ + N +GT + +++ P
Sbjct: 193 IRSLTFSPDS----QLLVT-ASDDGYIKIYDVQHA-NLAGTLSGHASWVLNVAFCPDDTH 246
Query: 290 LCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
F+ SSS+D++V WD+ + V T + + + ++ G ++ GD + + +Y
Sbjct: 247 --FV---SSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 207 (77.9 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LA+G D +N++ + + +L GH+ P+ S+ F + L G IKI+++
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+ TL+GH S + +V F P + S S D +K+WD+ + CI+T+ H +
Sbjct: 220 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWG 279
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
++++ +G I S G+D + +
Sbjct: 280 VKYNGNGSKIVSVGDDQEIHV 300
Score = 179 (68.1 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 36/139 (25%), Positives = 67/139 (48%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
+ A+ D + LW L + S+ ++ F + L+ G G + I+ +
Sbjct: 78 IAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQYLATGTHMGKVNIFGVES 137
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+ +L+ I S+ + P G YL SG++D I ++D+ ++T GH+ I S+
Sbjct: 138 GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 197
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSPD Q + + +DG ++I
Sbjct: 198 FSPDSQLLVTASDDGYIKI 216
Score = 166 (63.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 47/160 (29%), Positives = 73/160 (45%)
Query: 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80
LA S Q LATG KVN++ + SL + S+ + + L++G G
Sbjct: 112 LAFSPDS-QYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
I I+++A + TL GH I S+ F P L + S D +IK++D++ T G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIH 180
H+ + ++ F PD S D V++ T T IH
Sbjct: 231 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG--TRTCIH 268
Score = 138 (53.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 36/146 (24%), Positives = 67/146 (45%)
Query: 25 KKSGQVLATGGDDKKVNLWALGKSNCIM--SLSGHSTPVESVQFGNGEETLSAGCQSGSI 82
K++ + + TG D V +W + SL GH V SV + ++ I
Sbjct: 29 KENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 88
Query: 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS 142
++W+L ++++ ++ F P YL +G+ + ++ + Y+
Sbjct: 89 RLWDLENGKQMKSIDAGPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRG 148
Query: 143 KSINSIRFSPDGQWIASGGEDGVVRI 168
K I SI +SPDG+++ASG DG++ I
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINI 174
Score = 128 (50.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 65/282 (23%), Positives = 116/282 (41%)
Query: 71 ETLSAGCQSGSIKIWNLAVPTV--QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
ET+ G +K+W + Q +L GH+ + SVD S SLD+ I+LWD
Sbjct: 33 ETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 92
Query: 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-GASFHLTNTSIHVVDLSLV 187
L + + ++ FSPD Q++A+G G V I G S+ ++
Sbjct: 93 LENGKQMKSIDAGPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFIL 152
Query: 188 HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247
+P +Y +S ++ T G+ T + I S D +L
Sbjct: 153 SIAYSPDGKYLASGAIDGIINIFDIAT-GKLLHT-LEGHAMPIRSLTFSPDS----QLLV 206
Query: 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFW 307
T A+ Y I+ + N +GT + +++ P F+ SSS+D++V W
Sbjct: 207 T-ASDDGYIKIYDVQHA-NLAGTLSGHASWVLNVAFCPDDTH--FV---SSSSDKSVKVW 259
Query: 308 DLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
D+ + + T + + + ++ G ++ GD + + VY
Sbjct: 260 DVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 207 (77.9 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LA+G D +N++ + + +L GH+ P+ S+ F + L G IKI+++
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+ TL+GH S + +V F P + S S D +K+WD+ + CI+T+ H +
Sbjct: 220 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWG 279
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
++++ +G I S G+D + +
Sbjct: 280 VKYNGNGSKIVSVGDDQEIHV 300
Score = 179 (68.1 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 36/139 (25%), Positives = 67/139 (48%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
+ A+ D + LW L + S+ ++ F + L+ G G + I+ +
Sbjct: 78 IAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQHLATGTHMGKVNIFGVES 137
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+ +L+ I S+ + P G YL SG++D I ++D+ ++T GH+ I S+
Sbjct: 138 GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 197
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSPD Q + + +DG ++I
Sbjct: 198 FSPDSQLLVTASDDGYIKI 216
Score = 164 (62.8 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 47/160 (29%), Positives = 73/160 (45%)
Query: 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80
LA S Q LATG KVN++ + SL + S+ + + L++G G
Sbjct: 112 LAFSPDS-QHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
I I+++A + TL GH I S+ F P L + S D +IK++D++ T G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIH 180
H+ + ++ F PD S D V++ T T IH
Sbjct: 231 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG--TRTCIH 268
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 35/146 (23%), Positives = 67/146 (45%)
Query: 25 KKSGQVLATGGDDKKVNLWALGKSNCIM--SLSGHSTPVESVQFGNGEETLSAGCQSGSI 82
K++ + + TG D V +W + SL GH V SV + ++ I
Sbjct: 29 KENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 88
Query: 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS 142
++W+L ++++ ++ F P +L +G+ + ++ + Y+
Sbjct: 89 RLWDLENGKQMKSIDAGPVDAWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRG 148
Query: 143 KSINSIRFSPDGQWIASGGEDGVVRI 168
K I SI +SPDG+++ASG DG++ I
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINI 174
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 65/282 (23%), Positives = 115/282 (40%)
Query: 71 ETLSAGCQSGSIKIWNLAVPTV--QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
ET+ G +K+W + Q +L GH+ + SVD S SLD+ I+LWD
Sbjct: 33 ETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 92
Query: 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-GASFHLTNTSIHVVDLSLV 187
L + + ++ FSPD Q +A+G G V I G S+ ++
Sbjct: 93 LENGKQMKSIDAGPVDAWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFIL 152
Query: 188 HPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFA 247
+P +Y +S ++ T G+ T + I S D +L
Sbjct: 153 SIAYSPDGKYLASGAIDGIINIFDIAT-GKLLHT-LEGHAMPIRSLTFSPDS----QLLV 206
Query: 248 TIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFW 307
T A+ Y I+ + N +GT + +++ P F+ SSS+D++V W
Sbjct: 207 T-ASDDGYIKIYDVQHA-NLAGTLSGHASWVLNVAFCPDDTH--FV---SSSSDKSVKVW 259
Query: 308 DLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
D+ + + T + + + ++ G ++ GD + + VY
Sbjct: 260 DVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 213 (80.0 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 50/167 (29%), Positives = 83/167 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H S+N LA G+ + T DD K+ +W + CI++ + H++ V + QF L
Sbjct: 342 HFDSMNALAYSP-DGKRIVTAADDGKLKVWDIESGFCIVTFTEHTSGVTACQFAKKGNVL 400
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGH-KSSITSVDFHPYGDYLCSGSLDSF-IKLWDLRR 131
GSI+ W+L RT + S + + P G+ + +GSLDSF + +W ++
Sbjct: 401 FTASLDGSIRAWDLIRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSLDSFDVHIWSVQT 460
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTS 178
+ GH ++++ F+PDG + SG D RI + F+ T TS
Sbjct: 461 GQLLDQLSGHEGPVSAVAFAPDGGLLVSGSWDKTARIWSVFNRTQTS 507
Score = 163 (62.4 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 40/168 (23%), Positives = 76/168 (45%)
Query: 1 MRAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
+R ++ K FM + AS+ C A +S +L G + L+ + N I +LS
Sbjct: 244 LRWRIVKRHYFMQNNASLKCAAFHAESN-LLVAGFSNGIFGLYEMPDFNLIHTLSISQNG 302
Query: 61 VESVQFGNGEETLSAGCQS-GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGS 119
++ V E L+ G G + +W + GH S+ ++ + P G + + +
Sbjct: 303 IDFVSINKSGEWLAFGASKLGQLLVWEWQSESYILKQQGHFDSMNALAYSPDGKRIVTAA 362
Query: 120 LDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
D +K+WD+ CI T+ H+ + + +F+ G + + DG +R
Sbjct: 363 DDGKLKVWDIESGFCIVTFTEHTSGVTACQFAKKGNVLFTASLDGSIR 410
Score = 143 (55.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 35/140 (25%), Positives = 64/140 (45%)
Query: 26 KSGQVLATGGDDK-KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKI 84
KSG+ LA G ++ +W + I+ GH + ++ + + + G +K+
Sbjct: 310 KSGEWLAFGASKLGQLLVWEWQSESYILKQQGHFDSMNALAYSPDGKRIVTAADDGKLKV 369
Query: 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSK- 143
W++ T H S +T+ F G+ L + SLD I+ WDL R T+ ++
Sbjct: 370 WDIESGFCIVTFTEHTSGVTACQFAKKGNVLFTASLDGSIRAWDLIRYRNFRTFTAPTRL 429
Query: 144 SINSIRFSPDGQWIASGGED 163
S + + P G+ +A+G D
Sbjct: 430 SFSCMAVDPSGEVVAAGSLD 449
Score = 120 (47.3 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 32/114 (28%), Positives = 53/114 (46%)
Query: 17 SVNCLALGKKSGQVLATGG-DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSA 75
S +C+A+ SG+V+A G D V++W++ + LSGH PV +V F L +
Sbjct: 430 SFSCMAVDP-SGEVVAAGSLDSFDVHIWSVQTGQLLDQLSGHEGPVSAVAFAPDGGLLVS 488
Query: 76 GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
G + +IW++ T ++ + SV P L +LD I W +
Sbjct: 489 GSWDKTARIWSVFNRTQTSEPLQLQADVLSVAVRPDSSQLAVSTLDGQISFWSV 542
Score = 117 (46.2 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 37/158 (23%), Positives = 62/158 (39%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF--GN 68
F H + V KK G VL T D + W L + + + + S +
Sbjct: 381 FTEHTSGVTACQFAKK-GNVLFTASLDGSIRAWDLIRYRNFRTFTAPTRLSFSCMAVDPS 439
Query: 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
GE + S + IW++ + L+GH+ +++V F P G L SGS D ++W
Sbjct: 440 GEVVAAGSLDSFDVHIWSVQTGQLLDQLSGHEGPVSAVAFAPDGGLLVSGSWDKTARIWS 499
Query: 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
+ + + S+ PD +A DG +
Sbjct: 500 VFNRTQTSEPLQLQADVLSVAVRPDSSQLAVSTLDGQI 537
Score = 116 (45.9 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 30/136 (22%), Positives = 66/136 (48%)
Query: 34 GGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ 93
G D+ + W + K + M ++ ++ F L AG +G ++ + +
Sbjct: 238 GADESDLR-WRIVKRHYFMQ---NNASLKCAAFHAESNLLVAGFSNGIFGLYEMPDFNLI 293
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLD-SFIKLWDLRRKGCIYTYRGHSKSINSIRFSP 152
TL+ ++ I V + G++L G+ + +W+ + + I +GH S+N++ +SP
Sbjct: 294 HTLSISQNGIDFVSINKSGEWLAFGASKLGQLLVWEWQSESYILKQQGHFDSMNALAYSP 353
Query: 153 DGQWIASGGEDGVVRI 168
DG+ I + +DG +++
Sbjct: 354 DGKRIVTAADDGKLKV 369
Score = 57 (25.1 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 505 MLGQGYKKCVKVYNALMPVKSVLLKKQTVQGKLGQTFRDLLAEIEGLTEGSLTAKFLSSR 564
++ G K + +Y+ VLLKK TV L + + LTE + L
Sbjct: 590 LIAGGNSKYMCLYST---TTMVLLKKFTVSVNLSLSGTQEFLNSKQLTEAG-PQELLDDH 645
Query: 565 NLREKEDRIGESQP 578
+ ++EDR+ S P
Sbjct: 646 DASDREDRVNRSLP 659
Score = 57 (25.1 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 20/84 (23%), Positives = 32/84 (38%)
Query: 268 SGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST-TEKNSSTIR 326
SG C+ TS Q +L T+S D ++ WDL ++ T T +
Sbjct: 374 SGFCIVTFTEHTSGVTACQFAKKGNVLFTAS-LDGSIRAWDLIRYRNFRTFTAPTRLSFS 432
Query: 327 RLTFSEGGECLLGGDTEGLKVYGW 350
+ GE + G + V+ W
Sbjct: 433 CMAVDPSGEVVAAGSLDSFDVHIW 456
Score = 48 (22.0 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 328 LTFSEGGECLLGGDTEGLKVYGWEPARQYD 357
++F+ G TEGL +Y + Q+D
Sbjct: 681 VSFAPDGAAFCAASTEGLLIYSLDHTVQFD 710
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 140 GHSKSINSIRFSPDGQWIASGG 161
G +K+ ++I++S DG + +GG
Sbjct: 573 GGTKAFHTIQYSMDGSCLIAGG 594
Score = 39 (18.8 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 12/64 (18%), Positives = 25/64 (39%)
Query: 277 SRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGEC 336
+R S S + P ++ S V+ W ++ L+ + + + F+ G
Sbjct: 427 TRLSFSCMAVDPS-GEVVAAGSLDSFDVHIWSVQTGQLLDQLSGHEGPVSAVAFAPDGGL 485
Query: 337 LLGG 340
L+ G
Sbjct: 486 LVSG 489
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 198 (74.8 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 50/170 (29%), Positives = 82/170 (48%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
K +H +V C+A LA+G +D + +W +L GH V
Sbjct: 103 KPSSTHTLTSHRDAVTCVAFHPVFTS-LASGSEDCTIKIWDWELGEIERTLKGHIRGVSG 161
Query: 64 VQFGNGE-ETLSAGCQSG-SIKIWNLAVPTVQ-RTLNGHKSSITSVDFHPYGD-YLCSGS 119
+ +G + TL A C S +IK+W+ + RTL+GH S++SV F D +L S S
Sbjct: 162 LDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISAS 221
Query: 120 LDSFIKLWDLRRKGCIYTYRGHSKS-INSIRFSPDGQWIASGGEDGVVRI 168
D +++WD+ C+ + ++S I + S DG+W+ SGG D + +
Sbjct: 222 RDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITV 271
Score = 158 (60.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 46/131 (35%), Positives = 68/131 (51%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
W L K + +L+ H V V F +L++G + +IKIW+ + ++RTL GH
Sbjct: 100 W-LPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRG 158
Query: 103 ITSVDFHPY-GD-YLCSGSLDSFIKLWDLRRKGC-IYTYRGHSKSINSIRF--SPDGQWI 157
++ +D+ G+ L S S D IKLWD + I T GH S++S+RF S D I
Sbjct: 159 VSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLI 218
Query: 158 ASGGEDGVVRI 168
S DG +RI
Sbjct: 219 -SASRDGTLRI 228
Score = 130 (50.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
E ++ G + +IK+W A + +TL+GH + + + FHP G YL S S D I+ WDL
Sbjct: 321 EFVATGARDKTIKLWE-ARGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLS 379
Query: 131 RKG-CIYTYRG-HSKSINSIRFSP 152
++G + T G H ++ IR++P
Sbjct: 380 QEGRLVKTISGAHEHFVSCIRWAP 403
Score = 128 (50.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 38/137 (27%), Positives = 60/137 (43%)
Query: 24 GKKSGQVLATGGDDKKVNLWALGKSNC-IMSLSGHSTPVESVQF--GNGEETLSAGCQSG 80
G+K +LA+ D + LW K I +LSGH V SV+F N +SA + G
Sbjct: 166 GQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISAS-RDG 224
Query: 81 SIKIWNLAVPTVQRTLNGHKSS-ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR 139
+++IW+++ + + S I V G +L SG D I +W++
Sbjct: 225 TLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALL 284
Query: 140 GHSKSINSIRFSPDGQW 156
GH I F+P +
Sbjct: 285 GHENFIECCVFAPPASY 301
Score = 62 (26.9 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 16/72 (22%), Positives = 35/72 (48%)
Query: 285 PQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTE 343
P + C + T + D+T+ W+ + L+ T + + +R L F GG+ L D +
Sbjct: 314 PPATSSCEFVATGAR-DKTIKLWEA-RGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDK 371
Query: 344 GLKVYGWEPARQ 355
++ W+ +++
Sbjct: 372 TIRC--WDLSQE 381
Score = 54 (24.1 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 297 SSSADRTVNFWDLEK-FSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVYGWE 351
S+S D T+ WD+ F + S IR ++ S G+ L+ GG + + V WE
Sbjct: 219 SASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITV--WE 273
Score = 43 (20.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 268 SGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDL 309
+G CV V S T I SP S D+ + W++
Sbjct: 233 TGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEV 274
Score = 42 (19.8 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 297 SSSADRTVNFWDL-EKFSLVST 317
S S D+T+ WDL ++ LV T
Sbjct: 366 SVSDDKTIRCWDLSQEGRLVKT 387
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 198 (74.8 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 50/170 (29%), Positives = 82/170 (48%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
K +H +V C+A LA+G +D + +W +L GH V
Sbjct: 103 KPSSTHTLTSHRDAVTCVAFHPVFTS-LASGSEDCTIKIWDWELGEIERTLKGHIRGVSG 161
Query: 64 VQFGNGE-ETLSAGCQSG-SIKIWNLAVPTVQ-RTLNGHKSSITSVDFHPYGD-YLCSGS 119
+ +G + TL A C S +IK+W+ + RTL+GH S++SV F D +L S S
Sbjct: 162 LDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISAS 221
Query: 120 LDSFIKLWDLRRKGCIYTYRGHSKS-INSIRFSPDGQWIASGGEDGVVRI 168
D +++WD+ C+ + ++S I + S DG+W+ SGG D + +
Sbjct: 222 RDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITV 271
Score = 158 (60.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 46/131 (35%), Positives = 68/131 (51%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
W L K + +L+ H V V F +L++G + +IKIW+ + ++RTL GH
Sbjct: 100 W-LPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRG 158
Query: 103 ITSVDFHPY-GD-YLCSGSLDSFIKLWDLRRKGC-IYTYRGHSKSINSIRF--SPDGQWI 157
++ +D+ G+ L S S D IKLWD + I T GH S++S+RF S D I
Sbjct: 159 VSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLI 218
Query: 158 ASGGEDGVVRI 168
S DG +RI
Sbjct: 219 -SASRDGTLRI 228
Score = 130 (50.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
E ++ G + +IK+W A + +TL+GH + + + FHP G YL S S D I+ WDL
Sbjct: 321 EFVATGARDKTIKLWE-ARGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLS 379
Query: 131 RKG-CIYTYRG-HSKSINSIRFSP 152
++G + T G H ++ IR++P
Sbjct: 380 QEGRLVKTISGAHEHFVSCIRWAP 403
Score = 128 (50.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 38/137 (27%), Positives = 60/137 (43%)
Query: 24 GKKSGQVLATGGDDKKVNLWALGKSNC-IMSLSGHSTPVESVQF--GNGEETLSAGCQSG 80
G+K +LA+ D + LW K I +LSGH V SV+F N +SA + G
Sbjct: 166 GQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISAS-RDG 224
Query: 81 SIKIWNLAVPTVQRTLNGHKSS-ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR 139
+++IW+++ + + S I V G +L SG D I +W++
Sbjct: 225 TLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALL 284
Query: 140 GHSKSINSIRFSPDGQW 156
GH I F+P +
Sbjct: 285 GHENFIECCVFAPPASY 301
Score = 62 (26.9 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 16/72 (22%), Positives = 35/72 (48%)
Query: 285 PQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTE 343
P + C + T + D+T+ W+ + L+ T + + +R L F GG+ L D +
Sbjct: 314 PPATSSCEFVATGAR-DKTIKLWEA-RGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDK 371
Query: 344 GLKVYGWEPARQ 355
++ W+ +++
Sbjct: 372 TIRC--WDLSQE 381
Score = 54 (24.1 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 297 SSSADRTVNFWDLEK-FSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVYGWE 351
S+S D T+ WD+ F + S IR ++ S G+ L+ GG + + V WE
Sbjct: 219 SASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITV--WE 273
Score = 43 (20.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 268 SGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDL 309
+G CV V S T I SP S D+ + W++
Sbjct: 233 TGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEV 274
Score = 42 (19.8 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 297 SSSADRTVNFWDL-EKFSLVST 317
S S D+T+ WDL ++ LV T
Sbjct: 366 SVSDDKTIRCWDLSQEGRLVKT 387
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 206 (77.6 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 39/141 (27%), Positives = 75/141 (53%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LA+G D +N++ + + +L GH+ P+ S+ F + L G IKI+++
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+ TL+GH S + +V F P + S S D +K+WD+ + C++T+ H +
Sbjct: 220 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWG 279
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
++++ +G I S G+D + +
Sbjct: 280 VKYNGNGSKIVSVGDDQEIHV 300
Score = 182 (69.1 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 37/139 (26%), Positives = 67/139 (48%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
+ A+ D + LW L I S+ ++ F + L+ G G + I+ +
Sbjct: 78 IAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVES 137
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+ +L+ I S+ + P G YL SG++D I ++D+ ++T GH+ I S+
Sbjct: 138 GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 197
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSPD Q + + +DG ++I
Sbjct: 198 FSPDSQLLVTASDDGYIKI 216
Score = 165 (63.1 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 43/148 (29%), Positives = 69/148 (46%)
Query: 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80
LA S Q LATG KVN++ + SL + S+ + + L++G G
Sbjct: 112 LAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
I I+++A + TL GH I S+ F P L + S D +IK++D++ T G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRI 168
H+ + ++ F PD S D V++
Sbjct: 231 HASWVLNVAFCPDDTHFVSSSSDKSVKV 258
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/161 (26%), Positives = 76/161 (47%)
Query: 13 AHGASVNCLALG---KKSGQVLATGG-DDK-KVNLWALGKSNCIMSLSGHSTPVESVQFG 67
AH ++ +A G K++ + + TG DD KV W + + SL GH V SV
Sbjct: 14 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDIS 73
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ ++ I++W+L ++++ ++ F P YL +G+ + ++
Sbjct: 74 HTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIF 133
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ Y+ K I SI +SPDG+++ASG DG++ I
Sbjct: 134 GVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 174
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 71/300 (23%), Positives = 123/300 (41%)
Query: 57 HSTPVESVQFGNGE----ETLSAGCQSGSIKIWNLAVPTV--QRTLNGHKSSITSVDFHP 110
H + SV +G + ET+ G +K+W + Q +L GH+ + SVD
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDISH 74
Query: 111 YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-G 169
S SLD+ I+LWDL I + ++ FSPD Q++A+G G V I G
Sbjct: 75 TLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFG 134
Query: 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTR 229
S+ ++ +P +Y +S ++ T G+ T +
Sbjct: 135 VESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-GKLLHT-LEGHAMP 192
Query: 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPM 289
I S D +L T A+ Y I+ + N +GT + +++ P
Sbjct: 193 IRSLTFSPDS----QLLVT-ASDDGYIKIYDVQHA-NLAGTLSGHASWVLNVAFCPDDTH 246
Query: 290 LCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
F+ SSS+D++V WD+ + V T + + + ++ G ++ GD + + VY
Sbjct: 247 --FV---SSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 218 (81.8 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 42/136 (30%), Positives = 68/136 (50%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
L + +D V LW+L C++ GH+ PV QF +G ++W
Sbjct: 556 LLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY 615
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
R GH + + FHP +Y+ +GS D ++LWD+ C+ + GH I+S+ F
Sbjct: 616 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 675
Query: 151 SPDGQWIASGGEDGVV 166
SP+G+++A+G DG V
Sbjct: 676 SPNGRFLATGATDGRV 691
Score = 214 (80.4 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 42/141 (29%), Positives = 70/141 (49%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G +GG D+ LWA + +GH V +F ++ G ++++W++
Sbjct: 595 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 654
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
R GHK I S+ F P G +L +G+ D + LWD+ + +GH+ ++ S
Sbjct: 655 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCS 714
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+RFS DG+ +ASG D VR+
Sbjct: 715 LRFSRDGEILASGSMDNTVRL 735
Score = 204 (76.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A VNC S V ATG D+ V LW + NC+ +GH P+ S+ F
Sbjct: 621 FAGHLADVNCTRFHPNSNYV-ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 679
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
L+ G G + +W++ + L GH ++ S+ F G+ L SGS+D+ ++LWD
Sbjct: 680 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 175 (66.7 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 35/115 (30%), Positives = 52/115 (45%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GHS PV F L + + G++++W+L T GH + F PYG
Sbjct: 537 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 596
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y SG D +LW + + GH +N RF P+ ++A+G D VR+
Sbjct: 597 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 651
Score = 156 (60.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153
+ L GH + F P +YL S S D ++LW L+ C+ Y+GH+ + +FSP
Sbjct: 535 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 594
Query: 154 GQWIASGGEDGVVRIGASFHLTNTSI---HVVDLSLV--HP 189
G + SGG D V R+ A+ H I H+ D++ HP
Sbjct: 595 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP 635
Score = 86 (35.3 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
+ SADRTV WD+ + V + I LTFS G L G T+G +V W+
Sbjct: 642 TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD 695
Score = 73 (30.8 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 23/91 (25%), Positives = 39/91 (42%)
Query: 268 SGTCVPVSVSRTS-LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326
+G CV + + L SP F+ T + D V WD+ +V + ++ T+
Sbjct: 656 NGNCVRIFTGHKGPIHSLTFSPNGRFLAT--GATDGRVLLWDIGHGLMVGELKGHTDTVC 713
Query: 327 RLTFSEGGECLLGGDTEGLKVYGWEPARQYD 357
L FS GE L G + V W+ + ++
Sbjct: 714 SLRFSRDGEILASGSMDNT-VRLWDAIKAFE 743
Score = 50 (22.7 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 294 LTTSSSADRTVNFWD-LEKFSLVSTTEKNSSTIRRLTFSEGG-ECLLG 339
+ S S D TV WD ++ F + T + ++T + E E LLG
Sbjct: 723 ILASGSMDNTVRLWDAIKAFEDLETDDFTTAT-GHINLPENSQELLLG 769
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 218 (81.8 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 42/136 (30%), Positives = 68/136 (50%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
L + +D V LW+L C++ GH+ PV QF +G ++W
Sbjct: 558 LLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY 617
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
R GH + + FHP +Y+ +GS D ++LWD+ C+ + GH I+S+ F
Sbjct: 618 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 677
Query: 151 SPDGQWIASGGEDGVV 166
SP+G+++A+G DG V
Sbjct: 678 SPNGRFLATGATDGRV 693
Score = 214 (80.4 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 42/141 (29%), Positives = 70/141 (49%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G +GG D+ LWA + +GH V +F ++ G ++++W++
Sbjct: 597 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
R GHK I S+ F P G +L +G+ D + LWD+ + +GH+ ++ S
Sbjct: 657 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCS 716
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+RFS DG+ +ASG D VR+
Sbjct: 717 LRFSRDGEILASGSMDNTVRL 737
Score = 204 (76.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A VNC S V ATG D+ V LW + NC+ +GH P+ S+ F
Sbjct: 623 FAGHLADVNCTRFHPNSNYV-ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 681
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
L+ G G + +W++ + L GH ++ S+ F G+ L SGS+D+ ++LWD
Sbjct: 682 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 175 (66.7 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 35/115 (30%), Positives = 52/115 (45%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GHS PV F L + + G++++W+L T GH + F PYG
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 598
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y SG D +LW + + GH +N RF P+ ++A+G D VR+
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 653
Score = 156 (60.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153
+ L GH + F P +YL S S D ++LW L+ C+ Y+GH+ + +FSP
Sbjct: 537 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 596
Query: 154 GQWIASGGEDGVVRIGASFHLTNTSI---HVVDLSLV--HP 189
G + SGG D V R+ A+ H I H+ D++ HP
Sbjct: 597 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP 637
Score = 86 (35.3 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
+ SADRTV WD+ + V + I LTFS G L G T+G +V W+
Sbjct: 644 TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD 697
Score = 73 (30.8 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 23/91 (25%), Positives = 39/91 (42%)
Query: 268 SGTCVPVSVSRTS-LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326
+G CV + + L SP F+ T + D V WD+ +V + ++ T+
Sbjct: 658 NGNCVRIFTGHKGPIHSLTFSPNGRFLAT--GATDGRVLLWDIGHGLMVGELKGHTDTVC 715
Query: 327 RLTFSEGGECLLGGDTEGLKVYGWEPARQYD 357
L FS GE L G + V W+ + ++
Sbjct: 716 SLRFSRDGEILASGSMDNT-VRLWDAIKAFE 745
Score = 50 (22.7 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 294 LTTSSSADRTVNFWD-LEKFSLVSTTEKNSSTIRRLTFSEGG-ECLLG 339
+ S S D TV WD ++ F + T + ++T + E E LLG
Sbjct: 725 ILASGSMDNTVRLWDAIKAFEDLETDDFTTAT-GHINLPENSQELLLG 771
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 218 (81.8 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 42/136 (30%), Positives = 68/136 (50%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
L + +D V LW+L C++ GH+ PV QF +G ++W
Sbjct: 559 LLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY 618
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
R GH + + FHP +Y+ +GS D ++LWD+ C+ + GH I+S+ F
Sbjct: 619 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 678
Query: 151 SPDGQWIASGGEDGVV 166
SP+G+++A+G DG V
Sbjct: 679 SPNGRFLATGATDGRV 694
Score = 214 (80.4 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 42/141 (29%), Positives = 70/141 (49%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G +GG D+ LWA + +GH V +F ++ G ++++W++
Sbjct: 598 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 657
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
R GHK I S+ F P G +L +G+ D + LWD+ + +GH+ ++ S
Sbjct: 658 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCS 717
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+RFS DG+ +ASG D VR+
Sbjct: 718 LRFSRDGEILASGSMDNTVRL 738
Score = 204 (76.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A VNC S V ATG D+ V LW + NC+ +GH P+ S+ F
Sbjct: 624 FAGHLADVNCTRFHPNSNYV-ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 682
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
L+ G G + +W++ + L GH ++ S+ F G+ L SGS+D+ ++LWD
Sbjct: 683 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 175 (66.7 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 35/115 (30%), Positives = 52/115 (45%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GHS PV F L + + G++++W+L T GH + F PYG
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 599
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y SG D +LW + + GH +N RF P+ ++A+G D VR+
Sbjct: 600 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 654
Score = 156 (60.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153
+ L GH + F P +YL S S D ++LW L+ C+ Y+GH+ + +FSP
Sbjct: 538 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 597
Query: 154 GQWIASGGEDGVVRIGASFHLTNTSI---HVVDLSLV--HP 189
G + SGG D V R+ A+ H I H+ D++ HP
Sbjct: 598 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP 638
Score = 86 (35.3 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
+ SADRTV WD+ + V + I LTFS G L G T+G +V W+
Sbjct: 645 TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD 698
Score = 74 (31.1 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 23/91 (25%), Positives = 39/91 (42%)
Query: 268 SGTCVPVSVSRTS-LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326
+G CV + + L SP F+ T + D V WD+ +V + ++ T+
Sbjct: 659 NGNCVRIFTGHKGPIHSLTFSPNGRFLAT--GATDGRVLLWDIGHGLMVGELKGHTDTVC 716
Query: 327 RLTFSEGGECLLGGDTEGLKVYGWEPARQYD 357
L FS GE L G + V W+ + ++
Sbjct: 717 SLRFSRDGEILASGSMDNT-VRLWDAVKAFE 746
Score = 50 (22.7 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 294 LTTSSSADRTVNFWDLEK-FSLVSTTEKNSSTIRRLTFSEGG-ECLLG 339
+ S S D TV WD K F + T + ++T + E E LLG
Sbjct: 726 ILASGSMDNTVRLWDAVKAFEDLETDDFTTAT-GHINLPENSQELLLG 772
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 224 (83.9 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 53/168 (31%), Positives = 81/168 (48%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVESV 64
EK F AH + +A+ VL T DD + LW K C+ GHS V +
Sbjct: 88 EKIASFEAHPDYIRSIAVHPTQPFVL-TASDDMTIKLWDWEKGWKCVQVYEGHSHYVMGL 146
Query: 65 QFGNGE-ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS-ITSVDFHPYGD--YLCSGSL 120
+ T ++ C ++KIW+L P TL H++ + VD++P D YL + S
Sbjct: 147 AINPKDTNTFASACLDRTVKIWSLGSPHANFTLEAHETKGVNHVDYYPQADKPYLLTTSD 206
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
D +K+WD K I T GH+ +++ + P+ I SG EDG ++I
Sbjct: 207 DKTVKVWDYTTKALIATLEGHTSNVSFACYHPELPVIISGSEDGTIKI 254
Score = 141 (54.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 41/164 (25%), Positives = 70/164 (42%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP-VESVQFGNG 69
+ H V LA+ K A+ D+ V +W+LG + +L H T V V +
Sbjct: 136 YEGHSHYVMGLAINPKDTNTFASACLDRTVKIWSLGSPHANFTLEAHETKGVNHVDYYPQ 195
Query: 70 EET--LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ L ++K+W+ + TL GH S+++ +HP + SGS D IK+W
Sbjct: 196 ADKPYLLTTSDDKTVKVWDYTTKALIATLEGHTSNVSFACYHPELPVIISGSEDGTIKIW 255
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG--VVRIG 169
+ + + + Q +A G +DG VV++G
Sbjct: 256 HANTYRLEQSLSYGLERAWCVSYQRGKQGVALGFDDGAVVVKMG 299
Score = 125 (49.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 35/132 (26%), Positives = 56/132 (42%)
Query: 40 VNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGH 99
V +W+ + I + PV + +F + + G ++I+N + H
Sbjct: 37 VYIWSYETQSIIKTFELTDVPVRAGRFIARKNWIVCGSDDFQLRIYNYNTSEKIASFEAH 96
Query: 100 KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG--CIYTYRGHSKSINSIRFSP-DGQW 156
I S+ HP ++ + S D IKLWD KG C+ Y GHS + + +P D
Sbjct: 97 PDYIRSIAVHPTQPFVLTASDDMTIKLWDWE-KGWKCVQVYEGHSHYVMGLAINPKDTNT 155
Query: 157 IASGGEDGVVRI 168
AS D V+I
Sbjct: 156 FASACLDRTVKI 167
Score = 72 (30.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
++LTTS D+TV WD +L++T E ++S + + ++ G +G +K+ W
Sbjct: 200 YLLTTSD--DKTVKVWDYTTKALIATLEGHTSNVSFACYHPELPVIISGSEDGTIKI--W 255
Query: 351 EPARQYDA-QPMGWG 364
A Y Q + +G
Sbjct: 256 H-ANTYRLEQSLSYG 269
Score = 44 (20.5 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 34/149 (22%), Positives = 58/149 (38%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL 338
+++S P L I+ S S D T+ W + L + +++ G + +
Sbjct: 229 SNVSFACYHPELPVII--SGSEDGTIKIWHANTYRLEQSLSYGLERAWCVSYQRGKQGVA 286
Query: 339 GGDTEGLKVYGWEPARQYDAQPM-GWGKVQDLAVTGTQLWFRRVGTWSHQDSGFSTLDSY 397
G +G V + R+ A M G GK+ +W R S G T S
Sbjct: 287 LGFDDGAVVV--KMGREEPAVSMDGSGKI---------VWARHNEVVSTVIKGGDT--SV 333
Query: 398 SAGSPVSTMGRERD--QIVPMNLS-APIG 423
G+P+S ++ ++ P LS +P G
Sbjct: 334 KDGAPISLPTKDLGSCEVYPQTLSHSPNG 362
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 215 (80.7 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 46/136 (33%), Positives = 72/136 (52%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NG 69
+ H V+C+ S LATG DK V LW+ + N + +GH PV ++ F NG
Sbjct: 422 YAGHLLDVDCVKFHPNSNY-LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG 480
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
+ SAG + +K+W+LA T+ + L GH +ITS+ F P + S S+D+ +++WD+
Sbjct: 481 KYLASAG-EDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539
Query: 130 RRKGCIYTYRGHSKSI 145
R C G S +
Sbjct: 540 RNTYCNAPADGSSSEL 555
Score = 212 (79.7 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 44/138 (31%), Positives = 69/138 (50%)
Query: 32 ATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91
A+ D+ LW+ ++ + +GH V+ V+F L+ G ++++W+
Sbjct: 400 ASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGN 459
Query: 92 VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRF 150
R GH+ + ++ F P G YL S D +KLWDL G +Y RGH+ +I S+ F
Sbjct: 460 SVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLA-SGTLYKELRGHTDNITSLTF 518
Query: 151 SPDGQWIASGGEDGVVRI 168
SPD IAS D VR+
Sbjct: 519 SPDSSLIASASMDNSVRV 536
Score = 176 (67.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 37/141 (26%), Positives = 65/141 (46%)
Query: 23 LGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSI 82
L SG L + +D + W L + GH+ PV + ++ +
Sbjct: 351 LSDSSG--LLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTA 408
Query: 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS 142
++W+ R GH + V FHP +YL +GS D ++LW ++ + + GH
Sbjct: 409 RLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHR 468
Query: 143 KSINSIRFSPDGQWIASGGED 163
+ ++ FSP+G+++AS GED
Sbjct: 469 GPVLALAFSPNGKYLASAGED 489
Score = 150 (57.9 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 34/115 (29%), Positives = 53/115 (46%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GH PV S +F + L + + SI+ W+L T GH + +D P
Sbjct: 338 LRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSL 397
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y S S D +LW R + Y GH ++ ++F P+ ++A+G D VR+
Sbjct: 398 YFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRL 452
Score = 59 (25.8 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVYGWEPA 353
+ S D+TV W ++ + V + + L FS G+ L G+ + LK+ W+ A
Sbjct: 443 TGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKL--WDLA 498
Score = 56 (24.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 15/64 (23%), Positives = 24/64 (37%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQY 356
S+ D+ + WDL +L ++ I LTFS + + V W+ Y
Sbjct: 485 SAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDN-SVRVWDIRNTY 543
Query: 357 DAQP 360
P
Sbjct: 544 CNAP 547
Score = 48 (22.0 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 279 TSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
TSL+ P S ++ S+S D +V WD+ + + +SS +
Sbjct: 514 TSLTFSPDSSLIA-----SASMDNSVRVWDIRNTYCNAPADGSSSEL 555
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 198 (74.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 45/158 (28%), Positives = 74/158 (46%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A + CLA +S ++ATG D LW + + +L+GH + S+ F
Sbjct: 173 FRGHTAEIVCLAFNPQS-TLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTG 231
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ L G + +W++ L+GH+ I+ V F+ + + SLD K+WD
Sbjct: 232 DRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAE 291
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T GH+ + + F+ GQ IA+ DG R+
Sbjct: 292 GGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRV 329
Score = 192 (72.6 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 37/117 (31%), Positives = 58/117 (49%)
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFH-PY 111
+L H P+ +V F G + KIW+ A TL GH++ + ++ F+ PY
Sbjct: 87 ALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPY 146
Query: 112 GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
GD + +GS D KLW C YT+RGH+ I + F+P +A+G D ++
Sbjct: 147 GDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKL 203
Score = 188 (71.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 48/162 (29%), Positives = 73/162 (45%)
Query: 3 AKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVE 62
A E+ H V +A G +ATG DK LW+ C + GH+ +
Sbjct: 122 ASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIV 181
Query: 63 SVQFGNGEETLSA-GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD 121
+ F N + TL A G + K+W++ TL GH + I S+ F+ GD L +GS D
Sbjct: 182 CLAF-NPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFD 240
Query: 122 SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED 163
LWD+ ++ GH I+ ++F+ D IA+ D
Sbjct: 241 HTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLD 282
Score = 177 (67.4 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 40/162 (24%), Positives = 71/162 (43%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K H ++C+ ++AT DK +W C+ +L GH+ V V F
Sbjct: 253 KVHVLSGHRGEISCVQFNWDCS-LIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCF 311
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ ++ G+ ++++ L GHK I+ V F+ G + + S+D ++
Sbjct: 312 NYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRV 371
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
W ++ C+ GHS I S F+ +G I +G +D RI
Sbjct: 372 WCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRI 413
Score = 172 (65.6 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 39/140 (27%), Positives = 65/140 (46%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN--GEETLSAGCQSGSIK 83
KSG TG D+ +W + +L GH V ++ F N G++ ++ G + K
Sbjct: 102 KSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDK-VATGSFDKTCK 160
Query: 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSK 143
+W+ T GH + I + F+P + +GS+D+ KLWD+ + T GH
Sbjct: 161 LWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFA 220
Query: 144 SINSIRFSPDGQWIASGGED 163
I S+ F+ G + +G D
Sbjct: 221 EIISLCFNTTGDRLVTGSFD 240
Score = 142 (55.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 38/163 (23%), Positives = 62/163 (38%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E+ H A + L +G L TG D LW + + LSGH + VQ
Sbjct: 210 EEVSTLAGHFAEIISLCFNT-TGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQ 268
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F ++ S K+W+ TL GH + V F+ G + + S D +
Sbjct: 269 FNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSR 328
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++ C+ GH I+ + F+ G + + D R+
Sbjct: 329 VFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRV 371
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 28/102 (27%), Positives = 47/102 (46%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIW 85
+GQ++AT D +++ C+ L GH + V F G L+A S ++W
Sbjct: 314 TGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTS-RVW 372
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ + L GH I S F+ GD + +GS D+ ++W
Sbjct: 373 CVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 100 (40.3 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS-P 152
R L H +T+V F+ G +GS D K+WD ++T GH + +I F+ P
Sbjct: 86 RALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 153 DGQWIASGGEDGVVRI 168
G +A+G D ++
Sbjct: 146 YGDKVATGSFDKTCKL 161
Score = 66 (28.3 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
L + S D T WD+E VST + + I L F+ G+ L+ G + + W+
Sbjct: 191 LVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAIL-WD 247
Score = 51 (23.0 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 11/54 (20%), Positives = 26/54 (48%)
Query: 291 CFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
C ++ T+S D++ WD E ++T ++ + + F+ G+ + +G
Sbjct: 273 CSLIATAS-LDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADG 325
Score = 47 (21.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 10/47 (21%), Positives = 23/47 (48%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
++S D+T W ++ + + E +S I F+ G+ ++ G +
Sbjct: 362 TASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKD 408
Score = 43 (20.2 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL 338
L ++SAD T + + F + E + I ++ F+ G +L
Sbjct: 317 LIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVL 361
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 218 (81.8 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 45/160 (28%), Positives = 78/160 (48%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
K+ + +AH +N +++ ++ AT D V LW + I S+ H V
Sbjct: 516 KISASVTKIAHEKDINSISIAPND-KIFATASQDSYVKLWNVNNLEPITSIKAHRRGVWH 574
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
V+F ++ G+IKIW+L+ T +TL GHK S+ F +G + S + +
Sbjct: 575 VEFSPIDQCFLTCSADGTIKIWSLSDYTCLKTLEGHKGSVLKASFISFGMQIVSVASEGL 634
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED 163
IKLW+++ C+ T+ GH I ++ + D + +GG D
Sbjct: 635 IKLWNIKTNECLNTFEGHESKIWALSVAKDQERFITGGSD 674
Score = 145 (56.1 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 34/148 (22%), Positives = 62/148 (41%)
Query: 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80
+ L K ++GGDD K + S ++ H + S+ ++ + Q
Sbjct: 493 IKLWKGFSTTSSSGGDDSKKKDKKISAS---VTKIAHEKDINSISIAPNDKIFATASQDS 549
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
+K+WN+ ++ H+ + V+F P + S D IK+W L C+ T G
Sbjct: 550 YVKLWNVNNLEPITSIKAHRRGVWHVEFSPIDQCFLTCSADGTIKIWSLSDYTCLKTLEG 609
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRI 168
H S+ F G I S +G++++
Sbjct: 610 HKGSVLKASFISFGMQIVSVASEGLIKL 637
Score = 134 (52.2 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 33/151 (21%), Positives = 67/151 (44%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
++ AL + ++L G + ++ + + + + GH P+ + + +++
Sbjct: 90 ISTFALSPNNEEILI-GCSNLQIKQYRIEDQSLVKIWKGHEGPINEIDIHSSGNIVASAS 148
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
++K+W+L H +T + FHP L + LD I+++DL K C+
Sbjct: 149 SDKTVKVWDLEKGYCTHNFQ-HDDVVTMLKFHPTLLKLVTVCLDLNIRVYDLVTKECVIL 207
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
H I+ I FS G+ + S G D V+ +
Sbjct: 208 -TNHLSQISGITFSNSGKELISSGRDKVLNV 237
Score = 127 (49.8 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115
G++ + +++ N + + A S IK ++L Q L GH+ + SVD G ++
Sbjct: 382 GYNDEIIDIKYINDDNIIVA-TNSNEIKTYDLNTKRAQ-VLRGHEDLVMSVDVSADGKHI 439
Query: 116 CSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF--SPDGQWIA-SGGEDGVVRIGASF 172
SGS D +WDL +K I GH+ I+ + P A + +D +++ F
Sbjct: 440 ISGSRDKSAMIWDLEKKESIAQLTGHTGVISCVALPKKPSTSMFAITASDDRTIKLWKGF 499
Query: 173 HLTNTS 178
T++S
Sbjct: 500 STTSSS 505
Score = 50 (22.7 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 14/70 (20%), Positives = 35/70 (50%)
Query: 282 SILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGD 341
S+L S + + S +++ + W+++ ++T E + S I L+ ++ E + G
Sbjct: 613 SVLKASFISFGMQIVSVASEGLIKLWNIKTNECLNTFEGHESKIWALSVAKDQERFITGG 672
Query: 342 TEGLKVYGWE 351
++ K+ W+
Sbjct: 673 SDS-KLIAWK 681
Score = 47 (21.6 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 27 SGQVLATGGDDKKVNLWALGKSN 49
SG+ L + G DK +N+W + N
Sbjct: 222 SGKELISSGRDKVLNVWDMLSKN 244
Score = 40 (19.1 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 297 SSSADRTVNFWDL 309
SS D+ +N WD+
Sbjct: 228 SSGRDKVLNVWDM 240
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 211 (79.3 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 45/155 (29%), Positives = 75/155 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C+A+ + + ATG D+ + +W L +SL+GH + V V L
Sbjct: 171 HLGWVRCIAV-EPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYL 229
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + +K W+L V R +GH S++ S+ HP D L + DS ++WD+R K
Sbjct: 230 FSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKA 289
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++T GH+ ++ S+ I +G D VR+
Sbjct: 290 NVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRL 324
Score = 172 (65.6 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 41/152 (26%), Positives = 70/152 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++V +A+ K + + G +D++V W L + I GH + V S+ + L
Sbjct: 213 HVSTVRGVAVSTKHPYLFSCG-EDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVL 271
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + + +IW++ TL GH +++ SV + +GS DS ++LWDL
Sbjct: 272 ATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGK 331
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
+ T H KS+ SI P AS D +
Sbjct: 332 SVCTLTNHKKSVRSIVLHPSLYMFASASPDNI 363
Score = 171 (65.3 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 44/156 (28%), Positives = 73/156 (46%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
+ H ++V LAL + VLAT G D +W + + +L+GH+ V SV
Sbjct: 252 YHGHLSAVYSLAL-HPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATN 310
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ G ++++W+LA TL HK S+ S+ HP S S D+ IK W
Sbjct: 311 PQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASASPDN-IKQWRCP 369
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
+ GH+ +N + + +G + SGG++G +
Sbjct: 370 EGKFVQNISGHTSIVNCMAANSEGV-LVSGGDNGTM 404
Score = 153 (58.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 44/159 (27%), Positives = 71/159 (44%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
+SGH V + G E + G IKIW+LA ++ +L GH S++ V
Sbjct: 168 ISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHP 227
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173
YL S D +K WDL I Y GH ++ S+ P +A+ G D RI
Sbjct: 228 YLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDM-- 285
Query: 174 LTNTSIHVVDLSLVHPLGTPPPQYTSS--VPFSHNTSLR 210
T ++H + + + + Q T+ + SH++++R
Sbjct: 286 RTKANVHTLT-GHTNTVASVVAQATNPQIITGSHDSTVR 323
Score = 48 (22.0 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328
+ S D TV WDL V T + ++R +
Sbjct: 315 TGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSI 346
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 196 (74.1 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 46/159 (28%), Positives = 74/159 (46%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NG 69
F H + L G Q+ AT D V LW L ++ + + HS PV V + G
Sbjct: 14 FTGHSGGITQLRFGPDGAQI-ATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKG 72
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
SAG ++KIW + V H ++ SVDF G + + S D K+W +
Sbjct: 73 NLVASAG-HDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRV 131
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
R+ + ++ + + S +FSP+G+ +A+ +D VRI
Sbjct: 132 ARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRI 170
Score = 189 (71.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 40/137 (29%), Positives = 70/137 (51%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+G+++AT DDK V ++ + C+ + + + + L+ IKI++
Sbjct: 155 NGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFD 214
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
++ + + H + + V FHP G +L SGS D I++ DL IYT GH+ ++N
Sbjct: 215 VSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVN 274
Query: 147 SIRFSPDGQWIASGGED 163
++ FS DG A+GG D
Sbjct: 275 AVAFSRDGDKFATGGSD 291
Score = 180 (68.4 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 37/159 (23%), Positives = 77/159 (48%)
Query: 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG 69
+F+AH +V + +G ++ T DDK +W + + + S + + V S +F
Sbjct: 97 EFVAHSKAVRSVDFDS-TGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPN 155
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
+ ++ S++I+++ RT +++ + +HP+G+ L + IK++D+
Sbjct: 156 GKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDV 215
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ Y HS +N + F P G ++ SG +D +RI
Sbjct: 216 SGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRI 254
Score = 143 (55.4 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
P ++R GH IT + F P G + + S DS + LW+L + + HS +N +
Sbjct: 8 PALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVA 67
Query: 150 FSPDGQWIASGGEDGVVRI 168
+SP G +AS G D V+I
Sbjct: 68 WSPKGNLVASAGHDRTVKI 86
Score = 140 (54.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 36/148 (24%), Positives = 62/148 (41%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F +H A VN +A K G ++A+ G D+ V +W HS V SV F +
Sbjct: 56 FASHSAPVNGVAWSPK-GNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTG 114
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ S KIW +A + + + S F P G + + S D ++++D+
Sbjct: 115 HLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVD 174
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIA 158
C+ T+ + + + P G +A
Sbjct: 175 SGECVRTFTEERAAPRQLAWHPWGNMLA 202
Score = 59 (25.8 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 21/69 (30%), Positives = 32/69 (46%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS-EGGECLLGGDTEGLKVYGW 350
F+L S S DRT+ DL + + T ++ + + FS +G + GG L V W
Sbjct: 242 FLL--SGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLV--W 297
Query: 351 EP-ARQYDA 358
+ YDA
Sbjct: 298 QSNLHTYDA 306
Score = 49 (22.3 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 24/86 (27%), Positives = 38/86 (44%)
Query: 297 SSSADRTVNFWDLEKFS----LVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL--KVYGW 350
SS A + N+ KFS LV+T + S R+ + GEC+ E + W
Sbjct: 138 SSFAQQN-NWVRSAKFSPNGKLVATASDDKSV--RIYDVDSGECVRTFTEERAAPRQLAW 194
Query: 351 EPARQYDAQPMGWGKVQDLAVTGTQL 376
P A +G +++ V+G+QL
Sbjct: 195 HPWGNMLAVALGCNRIKIFDVSGSQL 220
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 205 (77.2 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 55/175 (31%), Positives = 83/175 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V+ AL S L+ D K + LW L K C GH++ V SV +
Sbjct: 62 HSHFVSDCALSFDSHYALSASWD-KTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQV 120
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLN--GHKSSITSVDFHPYGDYLC--SGSLDSFIKLWDL 129
+G + +IKIWN+ + + T+ GH ++ V F P D L S D +K+WDL
Sbjct: 121 VSGSRDKTIKIWNI-IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDL 179
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDL 184
++ GH+ ++++ SPDG ASGG DG + + + L N S H+ L
Sbjct: 180 ETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLML---WDL-NESTHLYSL 230
Score = 183 (69.5 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 45/161 (27%), Positives = 82/161 (50%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLS--GHSTPV 61
K E F+ H + V +++ + QV++ G DK + +W + NC +++ GHS V
Sbjct: 94 KGECTHQFVGHTSDVLSVSISPDNRQVVS-GSRDKTIKIWNI-IGNCKYTITDGGHSDWV 151
Query: 62 ESVQFGNGEETL---SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG 118
V+F + L SAG ++K+W+L +++ + GH +++V P G SG
Sbjct: 152 SCVRFSPNPDNLTFVSAGWDK-AVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASG 210
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159
D + LWDL +Y+ + +IN++ FSP+ W+ +
Sbjct: 211 GRDGTLMLWDLNESTHLYSLEAKA-NINALVFSPNRYWLCA 250
Score = 163 (62.4 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 39/122 (31%), Positives = 58/122 (47%)
Query: 53 SLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAVPTV-----QRTLNGHKSSITSV 106
+L GHS V S+ + L +G + SI +WNL V QR L GH ++
Sbjct: 10 TLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDC 69
Query: 107 DFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
Y S S D I+LWDL + C + + GH+ + S+ SPD + + SG D +
Sbjct: 70 ALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTI 129
Query: 167 RI 168
+I
Sbjct: 130 KI 131
Score = 163 (62.4 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 49/165 (29%), Positives = 73/165 (44%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMS-----LSGHSTPVESVQFG- 67
H V L+ ++ +L +G DK + LW L + + L+GHS V
Sbjct: 14 HSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSF 73
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ LSA +I++W+L GH S + SV P + SGS D IK+W
Sbjct: 74 DSHYALSASWDK-TIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIW 132
Query: 128 DLRRKGCIYTYR--GHSKSINSIRFSP--DGQWIASGGEDGVVRI 168
++ C YT GHS ++ +RFSP D S G D V++
Sbjct: 133 NIIGN-CKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKV 176
Score = 130 (50.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 42/165 (25%), Positives = 78/165 (47%)
Query: 14 HGASVNCLALGKKSGQV-LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
H V+C+ + + G DK V +W L + S GH+ V +V
Sbjct: 147 HSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSL 206
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
++G + G++ +W+L T +L K++I ++ F P +LC+ + S I+++DL +
Sbjct: 207 CASGGRDGTLMLWDLNESTHLYSLEA-KANINALVFSPNRYWLCAAT-GSSIRIFDLETQ 264
Query: 133 GCI----YTYRGHSKSIN-----SIRFSPDGQWIASGGEDGVVRI 168
+ + G K + S+ +SPDGQ + SG D ++R+
Sbjct: 265 EKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLIRV 309
Score = 92 (37.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 28/83 (33%), Positives = 38/83 (45%)
Query: 92 VQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDLRRKGCIY--TYR---GHSKSI 145
++ TL GH +TS+ P D L SGS D I LW+L R Y R GHS +
Sbjct: 7 LRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFV 66
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
+ S D + S D +R+
Sbjct: 67 SDCALSFDSHYALSASWDKTIRL 89
Score = 72 (30.4 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 285 PQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS-EGGECLLGG 340
P L F+ S+ D+ V WDLE FSL ++ ++ + +T S +G C GG
Sbjct: 158 PNPDNLTFV---SAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGG 211
Score = 54 (24.1 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 15/64 (23%), Positives = 27/64 (42%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S D T+ WDL + + + + E ++ I L FS L ++++ E
Sbjct: 206 LCASGGRDGTLMLWDLNESTHLYSLEAKAN-INALVFSPNRYWLCAATGSSIRIFDLETQ 264
Query: 354 RQYD 357
+ D
Sbjct: 265 EKVD 268
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 212 (79.7 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 45/155 (29%), Positives = 76/155 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C+A+ + Q TG D+ + +W L +SL+GH + V V L
Sbjct: 202 HLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYL 260
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + +K W+L V R +GH S++ +D HP D L + S DS ++WD+R K
Sbjct: 261 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKA 320
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++T GH+ ++ ++R I +G D +R+
Sbjct: 321 SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRL 355
Score = 149 (57.5 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 38/152 (25%), Positives = 69/152 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++V + + +S + + G +DK+V W L + I GH + V + + L
Sbjct: 244 HISTVRGVIVSTRSPYLFSCG-EDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVL 302
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + +IW++ TL+GH +++ +V + +GS D+ I+LWDL
Sbjct: 303 VTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGK 362
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
T H KS+ ++ P ASG D +
Sbjct: 363 TRVTLTNHKKSVRAVVLHPLLYTFASGSPDNI 394
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 42/159 (26%), Positives = 66/159 (41%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
+SGH V + G + G +IKIW+LA ++ +L GH S++ V
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173
YL S D +K WDL I Y GH ++ + P + + D RI
Sbjct: 259 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDV-- 316
Query: 174 LTNTSIHVVDLSLVHPLGTPPPQYTSS--VPFSHNTSLR 210
T S+H + + + T Q + SH+T++R
Sbjct: 317 RTKASVHTLS-GHTNAVATVRCQAAEPQIITGSHDTTIR 354
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 213 (80.0 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 53/172 (30%), Positives = 87/172 (50%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++V C+A+ +G +L TG D + +W + + +L GH V VQF +G +
Sbjct: 337 HTSTVRCMAM---AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF-DGTTVV 392
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-K 132
S G ++KIWN RTL GH + + S+ F +CSGSLD+ I++WD R +
Sbjct: 393 SGGYDF-TVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPE 451
Query: 133 G--CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVV 182
G C+ +GH+ + ++ G + S D VR+ H T +H++
Sbjct: 452 GQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVW-DIH-EGTCVHML 499
Score = 202 (76.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 87/330 (26%), Positives = 150/330 (45%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
VL TG DD + +W + K + +L GH+ V + Q + +G ++K+W+
Sbjct: 268 VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVD 327
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
++ TL GH S++ + G L +GS D+ +++WD+ + T GH ++ ++
Sbjct: 328 GSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQ 385
Query: 150 FSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVD--LSLVHPLGTPPPQYTSSVPFSHNT 207
F DG + SGG D V+I + H T I + + V+ L + + S +T
Sbjct: 386 F--DGTTVVSGGYDFTVKIWNA-H-TGRCIRTLTGHNNRVYSL-LFESERSIVCSGSLDT 440
Query: 208 SLRK-SFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLN 266
S+R FT RP G + + + + + S Q L + N + ++ H
Sbjct: 441 SIRVWDFT--RPEGQEC-VALLQGHTSLTSGMQLRGNILVS--CNADSHVRVWDIHE--- 492
Query: 267 RSGTCVPV-SVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS---TTEK-- 320
GTCV + S R++++ L + +SS D TV WD+E+ +L+ T +
Sbjct: 493 --GTCVHMLSGHRSAITSLQWFGRN---MVATSSDDGTVKLWDIERGALIRDLVTLDSGG 547
Query: 321 NSSTIRRL-TFSEGGECLLGG--DTEGLKV 347
N I RL + S C +G +TE KV
Sbjct: 548 NGGCIWRLCSTSTMLACAVGSRNNTEETKV 577
Score = 171 (65.3 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 35/141 (24%), Positives = 69/141 (48%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ + +G D+ V +W+ + + +L GH++ V + L G + ++++W++
Sbjct: 308 GRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS--ILVTGSRDTTLRVWDV 365
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
TL+GH +++ V F G + SG D +K+W+ CI T GH+ + S
Sbjct: 366 ESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYS 423
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ F + + SG D +R+
Sbjct: 424 LLFESERSIVCSGSLDTSIRV 444
Score = 124 (48.7 bits), Expect = 0.00044, P = 0.00044
Identities = 34/135 (25%), Positives = 60/135 (44%)
Query: 37 DKKVNLWALGKSNCIMS---LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ 93
DK W +N IM L GH V + + ++ L G ++K+W + V
Sbjct: 234 DKIEKNW---NANPIMGSAVLRGHEDHVITCMQIH-DDVLVTGSDDNTLKVWCIDKGEVM 289
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153
TL GH + + G Y+ SGS D +K+W ++T +GH+ ++ + +
Sbjct: 290 YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA-- 347
Query: 154 GQWIASGGEDGVVRI 168
G + +G D +R+
Sbjct: 348 GSILVTGSRDTTLRV 362
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 213 (80.0 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 53/172 (30%), Positives = 87/172 (50%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++V C+A+ +G +L TG D + +W + + +L GH V VQF +G +
Sbjct: 337 HTSTVRCMAM---AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF-DGTTVV 392
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR-K 132
S G ++KIWN RTL GH + + S+ F +CSGSLD+ I++WD R +
Sbjct: 393 SGGYDF-TVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPE 451
Query: 133 G--CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVV 182
G C+ +GH+ + ++ G + S D VR+ H T +H++
Sbjct: 452 GQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVW-DIH-EGTCVHML 499
Score = 202 (76.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 87/330 (26%), Positives = 150/330 (45%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
VL TG DD + +W + K + +L GH+ V + Q + +G ++K+W+
Sbjct: 268 VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVD 327
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
++ TL GH S++ + G L +GS D+ +++WD+ + T GH ++ ++
Sbjct: 328 GSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQ 385
Query: 150 FSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVD--LSLVHPLGTPPPQYTSSVPFSHNT 207
F DG + SGG D V+I + H T I + + V+ L + + S +T
Sbjct: 386 F--DGTTVVSGGYDFTVKIWNA-H-TGRCIRTLTGHNNRVYSL-LFESERSIVCSGSLDT 440
Query: 208 SLRK-SFTKGRPGGTKAKIDVTRIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLN 266
S+R FT RP G + + + + + S Q L + N + ++ H
Sbjct: 441 SIRVWDFT--RPEGQEC-VALLQGHTSLTSGMQLRGNILVS--CNADSHVRVWDIHE--- 492
Query: 267 RSGTCVPV-SVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVS---TTEK-- 320
GTCV + S R++++ L + +SS D TV WD+E+ +L+ T +
Sbjct: 493 --GTCVHMLSGHRSAITSLQWFGRN---MVATSSDDGTVKLWDIERGALIRDLVTLDSGG 547
Query: 321 NSSTIRRL-TFSEGGECLLGG--DTEGLKV 347
N I RL + S C +G +TE KV
Sbjct: 548 NGGCIWRLCSTSTMLACAVGSRNNTEETKV 577
Score = 171 (65.3 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 35/141 (24%), Positives = 69/141 (48%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ + +G D+ V +W+ + + +L GH++ V + L G + ++++W++
Sbjct: 308 GRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS--ILVTGSRDTTLRVWDV 365
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
TL+GH +++ V F G + SG D +K+W+ CI T GH+ + S
Sbjct: 366 ESGRHLATLHGHHAAVRCVQFD--GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYS 423
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ F + + SG D +R+
Sbjct: 424 LLFESERSIVCSGSLDTSIRV 444
Score = 124 (48.7 bits), Expect = 0.00044, P = 0.00044
Identities = 34/135 (25%), Positives = 60/135 (44%)
Query: 37 DKKVNLWALGKSNCIMS---LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ 93
DK W +N IM L GH V + + ++ L G ++K+W + V
Sbjct: 234 DKIEKNW---NANPIMGSAVLRGHEDHVITCMQIH-DDVLVTGSDDNTLKVWCIDKGEVM 289
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153
TL GH + + G Y+ SGS D +K+W ++T +GH+ ++ + +
Sbjct: 290 YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA-- 347
Query: 154 GQWIASGGEDGVVRI 168
G + +G D +R+
Sbjct: 348 GSILVTGSRDTTLRV 362
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 215 (80.7 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 41/136 (30%), Positives = 68/136 (50%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
L + +D V LW+L C++ GH+ PV QF +G ++W
Sbjct: 559 LLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY 618
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
R GH + + +HP +Y+ +GS D ++LWD+ C+ + GH I+S+ F
Sbjct: 619 QPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 678
Query: 151 SPDGQWIASGGEDGVV 166
SP+G+++A+G DG V
Sbjct: 679 SPNGRFLATGATDGRV 694
Score = 211 (79.3 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 41/141 (29%), Positives = 70/141 (49%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G +GG D+ LWA + +GH V ++ ++ G ++++W++
Sbjct: 598 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDV 657
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
R GHK I S+ F P G +L +G+ D + LWD+ + +GH+ ++ S
Sbjct: 658 LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCS 717
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+RFS DG+ +ASG D VR+
Sbjct: 718 LRFSRDGEILASGSMDNTVRL 738
Score = 203 (76.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A VNC S V ATG D+ V LW + NC+ +GH P+ S+ F
Sbjct: 624 FAGHLADVNCTRYHPNSNYV-ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 682
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
L+ G G + +W++ + L GH ++ S+ F G+ L SGS+D+ ++LWD
Sbjct: 683 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 172 (65.6 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 34/115 (29%), Positives = 52/115 (45%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GHS PV F L + + G++++W+L T GH + F PYG
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 599
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
Y SG D +LW + + GH +N R+ P+ ++A+G D VR+
Sbjct: 600 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRL 654
Score = 156 (60.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 94 RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153
+ L GH + F P +YL S S D ++LW L+ C+ Y+GH+ + +FSP
Sbjct: 538 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY 597
Query: 154 GQWIASGGEDGVVRIGASFHLTNTSI---HVVDLSLV--HP 189
G + SGG D V R+ A+ H I H+ D++ HP
Sbjct: 598 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHP 638
Score = 86 (35.3 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
+ SADRTV WD+ + V + I LTFS G L G T+G +V W+
Sbjct: 645 TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD 698
Score = 74 (31.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 23/91 (25%), Positives = 39/91 (42%)
Query: 268 SGTCVPVSVSRTS-LSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIR 326
+G CV + + L SP F+ T + D V WD+ +V + ++ T+
Sbjct: 659 NGNCVRIFTGHKGPIHSLTFSPNGRFLAT--GATDGRVLLWDIGHGLMVGELKGHTDTVC 716
Query: 327 RLTFSEGGECLLGGDTEGLKVYGWEPARQYD 357
L FS GE L G + V W+ + ++
Sbjct: 717 SLRFSRDGEILASGSMDNT-VRLWDAVKAFE 746
Score = 50 (22.7 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 294 LTTSSSADRTVNFWDLEK-FSLVSTTEKNSSTIRRLTFSEGG-ECLLG 339
+ S S D TV WD K F + T + ++T + E E LLG
Sbjct: 726 ILASGSMDNTVRLWDAVKAFEDLETDDFTTAT-GHINLPENSQELLLG 772
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 201 (75.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 49/171 (28%), Positives = 86/171 (50%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E+ + H + VN ++ Q+ TG DD V LW + K + + ++ V SV
Sbjct: 132 ERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVT 190
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F + + + +G IK+W+L + ++ GH S+T + G YL S S+D+ ++
Sbjct: 191 FNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVR 250
Query: 126 LWDLR----RKGCIYTYRG--HSKSINSIR--FSPDGQWIASGGEDGVVRI 168
+WD+R ++ C+ ++G H+ N +R +S DG IA+G D V I
Sbjct: 251 VWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYI 301
Score = 196 (74.1 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 42/142 (29%), Positives = 69/142 (48%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESV-QFGNGEETLSAGCQSGSIKIWN 86
G +L + DK V +W + L GH++ V S G + G G++K+W+
Sbjct: 111 GSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWD 170
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ T + + SV F+ D + SG +D+ IK+WDLR+ IY+ +GH S+
Sbjct: 171 IRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVT 229
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
+ S DG ++ S D VR+
Sbjct: 230 GLSLSADGSYLLSNSMDNSVRV 251
Score = 171 (65.3 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 42/157 (26%), Positives = 74/157 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWAL-GKSNCIMSLSGHSTPVESVQFGNGEET 72
H V C +G LA+ G D+ + +W + G +L GHS V + +
Sbjct: 55 HEGEVYCCKF-HPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSL 113
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL-CSGSLDSFIKLWDLRR 131
L + ++ +W+ + L GH S + S G L C+GS D +KLWD+R+
Sbjct: 114 LFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRK 173
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
K ++T++ ++ + S+ F+ I SGG D +++
Sbjct: 174 KASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKV 209
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 36/151 (23%), Positives = 69/151 (45%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
S Q+++ GG D + +W L ++ I S+ GH V + L + S+++W+
Sbjct: 195 SDQIIS-GGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWD 253
Query: 87 L--------AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+ V Q ++ + ++ + G + +GS D F+ +WD + +Y
Sbjct: 254 IRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKL 313
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRIG 169
GH+ S+N + F P+ + SG D + IG
Sbjct: 314 PGHAGSVNEVAFHPEEPIVLSGSSDKRLYIG 344
Score = 128 (50.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 51 IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDFH 109
IM LSGH V +F TL++ I +WN+ TL GH ++ + ++
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYN 108
Query: 110 PYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIA-SGGEDGVVRI 168
G L S S D + +WD + +GH+ +NS + G +A +G +DG V++
Sbjct: 109 TDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKL 168
Score = 69 (29.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
L + S D TV WD+ K + V T + N+ + +TF++ + ++ GG +KV+
Sbjct: 156 LACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVW 210
Score = 59 (25.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S D + WDL + L+ + + + ++ L+ S G LL + V W+
Sbjct: 200 SGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDN-SVRVWD 253
Score = 48 (22.0 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
+ SADR V WD +V ++ ++ + F +L G ++
Sbjct: 292 AGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSD 338
Score = 48 (22.0 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 297 SSSADRTVNFWDLEKFS----LVSTTEKN----SSTIRRLTFSEGGECLLGGDTEGLKVY 348
S+S D +V WD+ F+ V + N + R ++S G + G + VY
Sbjct: 242 SNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRF-VY 300
Query: 349 GWE 351
W+
Sbjct: 301 IWD 303
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 203 (76.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 40/141 (28%), Positives = 73/141 (51%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LA+G D +N++ + + +L GH+ P+ S+ F + L G IKI+++
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+ TL+GH S + +V F P + S S D +K+WD + C++T+ H +
Sbjct: 220 QHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWG 279
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
++++ G I S G+D + I
Sbjct: 280 VKYNGSGSKIVSVGDDQEIHI 300
Score = 192 (72.6 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 39/142 (27%), Positives = 69/142 (48%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+G + A+ D + LW L I S+ S+ F + L+ G G + I+
Sbjct: 75 TGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFG 134
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ + +L+ I S+ + P G YL SG++D I ++D+ ++T GH+ I
Sbjct: 135 VETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIR 194
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
S+ FSPD Q + + +DG ++I
Sbjct: 195 SLTFSPDSQLLVTASDDGYIKI 216
Score = 168 (64.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 46/160 (28%), Positives = 73/160 (45%)
Query: 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80
LA S Q LATG KVN++ + SL + S+ + + L++G G
Sbjct: 112 LAFSPDS-QFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
I I+++A + TL GH I S+ F P L + S D +IK++D++ T G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIH 180
H + ++ F PD S D V++ + T T +H
Sbjct: 231 HGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAG--TRTCVH 268
Score = 167 (63.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 76/300 (25%), Positives = 125/300 (41%)
Query: 57 HSTPVESVQFG----NGEETLSAGCQSGSIKIW--NLAVPTVQRTLNGHKSSITSVDFHP 110
H + SV +G NG ET+ +G +K+W N +Q TL GH+ + SVD
Sbjct: 15 HDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISH 74
Query: 111 YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-G 169
G S SLD+ I+LWDL I + S+ FSPD Q++A+G G V I G
Sbjct: 75 TGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFG 134
Query: 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTR 229
S+ ++ +P +Y +S ++ T G+ T +
Sbjct: 135 VETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-GKLLHT-LEGHAMP 192
Query: 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPM 289
I S D +L T A+ Y I+ + N +GT +++ P
Sbjct: 193 IRSLTFSPDS----QLLVT-ASDDGYIKIYDVQHA-NLAGTLSGHGSWVLNVAFCPDDTH 246
Query: 290 LCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
F+ SSS+D++V WD + V T + + + ++ G ++ GD + + +Y
Sbjct: 247 --FV---SSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 203 (76.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 40/141 (28%), Positives = 73/141 (51%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LA+G D +N++ + + +L GH+ P+ S+ F + L G IKI+++
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+ TL+GH S + +V F P + S S D +K+WD + C++T+ H +
Sbjct: 220 QHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWG 279
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
++++ G I S G+D + I
Sbjct: 280 VKYNGSGSKIVSVGDDQEIHI 300
Score = 192 (72.6 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 39/142 (27%), Positives = 69/142 (48%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+G + A+ D + LW L I S+ S+ F + L+ G G + I+
Sbjct: 75 TGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFG 134
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ + +L+ I S+ + P G YL SG++D I ++D+ ++T GH+ I
Sbjct: 135 VETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIR 194
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
S+ FSPD Q + + +DG ++I
Sbjct: 195 SLTFSPDSQLLVTASDDGYIKI 216
Score = 168 (64.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 46/160 (28%), Positives = 73/160 (45%)
Query: 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80
LA S Q LATG KVN++ + SL + S+ + + L++G G
Sbjct: 112 LAFSPDS-QFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
I I+++A + TL GH I S+ F P L + S D +IK++D++ T G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIH 180
H + ++ F PD S D V++ + T T +H
Sbjct: 231 HGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAG--TRTCVH 268
Score = 162 (62.1 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 75/300 (25%), Positives = 125/300 (41%)
Query: 57 HSTPVESVQFG----NGEETLSAGCQSGSIKIW--NLAVPTVQRTLNGHKSSITSVDFHP 110
H + SV +G +G ET+ +G +K+W N +Q TL GH+ + SVD
Sbjct: 15 HDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISH 74
Query: 111 YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-G 169
G S SLD+ I+LWDL I + S+ FSPD Q++A+G G V I G
Sbjct: 75 TGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFG 134
Query: 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTR 229
S+ ++ +P +Y +S ++ T G+ T +
Sbjct: 135 VETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-GKLLHT-LEGHAMP 192
Query: 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPM 289
I S D +L T A+ Y I+ + N +GT +++ P
Sbjct: 193 IRSLTFSPDS----QLLVT-ASDDGYIKIYDVQHA-NLAGTLSGHGSWVLNVAFCPDDTH 246
Query: 290 LCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GDTEGLKVY 348
F+ SSS+D++V WD + V T + + + ++ G ++ GD + + +Y
Sbjct: 247 --FV---SSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 195 (73.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 47/159 (29%), Positives = 74/159 (46%)
Query: 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN 68
ED A +V CL+ K G +LA+G D + +W++ +GH V ++ F
Sbjct: 56 EDIKAEVTNV-CLS---KDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNR 111
Query: 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
L +G + + +W++ + L GH+ ITSV ++L + S D FIK+WD
Sbjct: 112 LGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWD 171
Query: 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
+ CI T GH I I +PD + S D +R
Sbjct: 172 TETQHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIR 210
Score = 190 (71.9 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 41/144 (28%), Positives = 76/144 (52%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVE--SVQFGNGEETLSAGCQSGSIKI 84
SG++ TG ++ +++W L K SL E +V L++G GSI+I
Sbjct: 27 SGKLAITGCGER-ISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRI 85
Query: 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKS 144
W+++ +Q NGH+ S+T++ F+ G+ L SGS D+ + +WD+ + ++ RGH
Sbjct: 86 WSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQ 145
Query: 145 INSIRFSPDGQWIASGGEDGVVRI 168
I S++ + + +DG ++I
Sbjct: 146 ITSVKLLERSNHLITSSKDGFIKI 169
Score = 151 (58.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 40/130 (30%), Positives = 54/130 (41%)
Query: 52 MSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPY 111
+SL GH PV + + + G +IKIW L ++ H SI V F P
Sbjct: 567 LSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPS 626
Query: 112 GDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGAS 171
+ S S D IK WD + I T H + S+ G + SG D +RI
Sbjct: 627 THHFISASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRI--- 683
Query: 172 FHLTNTSIHV 181
F+ T T I V
Sbjct: 684 FNQTETPIFV 693
Score = 146 (56.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 33/117 (28%), Positives = 55/117 (47%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H SV + + G +L +G D +V +W + + + L GH + SV+
Sbjct: 97 FNGHRGSVTTMTFNRL-GNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERS 155
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
L + G IKIW+ +T+ GH++ I +D +P LCS + D+ I+ W
Sbjct: 156 NHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFW 212
Score = 116 (45.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 44/173 (25%), Positives = 68/173 (39%)
Query: 3 AKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWAL----GKSNC---IMSLS 55
A + AH SV L L V +GG DK V W + N +++LS
Sbjct: 465 ASAARVASIKAHEGSVWSLVLTPDLRGV-TSGGADKLVKFWDFELIASQENSKHKVLNLS 523
Query: 56 GHST-PVES----VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHP 110
T VES +++ + L+ ++KI+ +L GHK + +D
Sbjct: 524 LTKTLKVESDVLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMCLDISD 583
Query: 111 YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED 163
+ +GS D IK+W L C ++ H SI + F P S +D
Sbjct: 584 DSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASKD 636
Score = 109 (43.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 34/140 (24%), Positives = 69/140 (49%)
Query: 55 SGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDY 114
+GH + + S+ + ++ L S S+K+WN+ + R++ + +V F P +
Sbjct: 393 AGHRSDIRSLSLSSNDQML-VSTSSESVKVWNMKSLSCIRSI-ACDYGLCTV-FAPGNLH 449
Query: 115 LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHL 174
+ G+ I++++L + + + H S+ S+ +PD + + SGG D +V+ F L
Sbjct: 450 VIVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFW-DFEL 508
Query: 175 T----NTSIHVVDLSLVHPL 190
N+ V++LSL L
Sbjct: 509 IASQENSKHKVLNLSLTKTL 528
Score = 108 (43.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 30/125 (24%), Positives = 58/125 (46%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
+V D H + + L+L +++T + KV W + +CI S++ + +
Sbjct: 385 EVSSTLDQAGHRSDIRSLSLSSNDQMLVSTSSESVKV--WNMKSLSCIRSIAC-DYGLCT 441
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
V F G + G ++G+I+++ LA ++ H+ S+ S+ P + SG D
Sbjct: 442 V-FAPGNLHVIVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKL 500
Query: 124 IKLWD 128
+K WD
Sbjct: 501 VKFWD 505
Score = 72 (30.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 12/53 (22%), Positives = 27/53 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-GLKVY 348
S+S D+ + +WD +KF + T E + + L G+ + G + ++++
Sbjct: 632 SASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIF 684
Score = 60 (26.2 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 296 TSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE 332
TS AD+ V FWD F L+++ E + + L+ ++
Sbjct: 493 TSGGADKLVKFWD---FELIASQENSKHKVLNLSLTK 526
Score = 47 (21.6 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 292 FILTTSSSADRTVNFWDLEK----FSLVSTTEK--NSSTIRRLTFSEGGECLLGGDTEGL 345
F++T + ++ + E+ F + ST ++ + S IR L+ S + L+ +E +
Sbjct: 360 FVITLAGNSLEAYEIKEKEQGGGAFEVSSTLDQAGHRSDIRSLSLSSNDQMLVSTSSESV 419
Query: 346 KVY 348
KV+
Sbjct: 420 KVW 422
Score = 38 (18.4 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 294 LTTSSSADRTVNFWDLE 310
L + SAD+ + W L+
Sbjct: 587 LIITGSADKNIKIWGLD 603
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 207 (77.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 46/157 (29%), Positives = 79/157 (50%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H ASV CLA+ G ++ +G D +W++ + + +LSGH + + ++ F +G
Sbjct: 370 VGHQASVRCLAV---HGDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAF-DGRR 425
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
++ G S++IW+ L GH S + + GD L +G D +++W L R
Sbjct: 426 -IATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQMS--GDTLVTGGSDGSVRVWSLTR 482
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
I+ H S+ S++F D I SGG DG V++
Sbjct: 483 MAPIHRLAAHDNSVTSLQF--DNNRIVSGGSDGRVKV 517
Score = 192 (72.6 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 43/139 (30%), Positives = 75/139 (53%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
+L +GG D++V +W + I L GH++ V ++ + + T +G + +++IW+L
Sbjct: 304 ILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSD-KNTAISGSRDTTLRIWDLRT 362
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
T + L GH++S+ + H GD + SGS D+ ++W + + GH I +I
Sbjct: 363 GTCRSVLVGHQASVRCLAVH--GDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIA 420
Query: 150 FSPDGQWIASGGEDGVVRI 168
F DG+ IA+G D VRI
Sbjct: 421 F--DGRRIATGSLDTSVRI 437
Score = 188 (71.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 43/155 (27%), Positives = 78/155 (50%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++V CL + K+ + +G D + +W L C L GH V + +G+ +
Sbjct: 331 HTSTVRCLKMSDKNTAI--SGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAV-HGDIVV 387
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
S G + ++W+++ R L+GH S I ++ F G + +GSLD+ +++WD
Sbjct: 388 S-GSYDTTARVWSISEGRFLRALSGHFSQIYAIAFD--GRRIATGSLDTSVRIWDPNTGQ 444
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C +GH+ + ++ S G + +GG DG VR+
Sbjct: 445 CHAILQGHTSLVGQLQMS--GDTLVTGGSDGSVRV 477
Score = 148 (57.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 44/170 (25%), Positives = 70/170 (41%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ +ATG D V +W C L GH++ V +Q +TL G GS+++W+L
Sbjct: 423 GRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQMSG--DTLVTGGSDGSVRVWSL 480
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
L H +S+TS+ F + + SG D +K+W LR + S ++
Sbjct: 481 TRMAPIHRLAAHDNSVTSLQFD--NNRIVSGGSDGRVKVWCLRTGQLLRELSTPSDTVWR 538
Query: 148 IRFSPDGQWIASGGEDGVVRIGASFHLT--NTSIHVVDLSLVHPLGTPPP 195
+ F + I S V SF +T + + PPP
Sbjct: 539 VTFEEEKAVIMSSRSGRTVMEVWSFSPPPEDTEFDAATIGASSSISEPPP 588
Score = 124 (48.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 36/134 (26%), Positives = 62/134 (46%)
Query: 36 DDKKVNLWALGKSNCIMSLSGHSTPVES-VQFGNGEETLSAGCQSGSIKIWNLAVPTVQR 94
D+ K++++ N +L GH V + V + N +S GC +++WN+A
Sbjct: 271 DNAKIHVYDTNGENQ-KTLEGHVMGVWAMVPWDN--ILVSGGCDR-EVRVWNMATGESIY 326
Query: 95 TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154
L GH S++ + + SGS D+ +++WDLR C GH S+ + + G
Sbjct: 327 LLRGHTSTVRCLKMSDKNTAI-SGSRDTTLRIWDLRTGTCRSVLVGHQASVRCL--AVHG 383
Query: 155 QWIASGGEDGVVRI 168
+ SG D R+
Sbjct: 384 DIVVSGSYDTTARV 397
Score = 56 (24.8 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 20/81 (24%), Positives = 35/81 (43%)
Query: 268 SGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRR 327
+G C + TSL + Q M L T S D +V W L + + + + +++
Sbjct: 442 TGQCHAILQGHTSL--VGQLQMSGDTLVTGGS-DGSVRVWSLTRMAPIHRLAAHDNSVTS 498
Query: 328 LTFSEGGECLLGGDTEGLKVY 348
L F + + GG +KV+
Sbjct: 499 LQF-DNNRIVSGGSDGRVKVW 518
Score = 54 (24.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG---GDTEGLKVYGWEPA 353
S +D V W L L+ S T+ R+TF E ++ G T ++V+ + P
Sbjct: 508 SGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVIMSSRSGRTV-MEVWSFSPP 566
Query: 354 ---RQYDAQPMG 362
++DA +G
Sbjct: 567 PEDTEFDAATIG 578
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 212 (79.7 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 44/123 (35%), Positives = 69/123 (56%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NG 69
+ H A V+C+ S LATG DK V LW+ + N + +GH PV + F NG
Sbjct: 419 YAGHLAGVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNG 477
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
+ +SAG + +K+W+LA T+ + L+GH ITSV F + S S+D+ +++WD+
Sbjct: 478 QYLVSAG-EDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDI 536
Query: 130 RRK 132
+ K
Sbjct: 537 KSK 539
Score = 188 (71.2 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 43/138 (31%), Positives = 63/138 (45%)
Query: 32 ATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91
A+ D LW+ ++ + +GH V+ V+F L+ G ++++W+
Sbjct: 397 ASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGN 456
Query: 92 VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT-YRGHSKSINSIRF 150
R GH + + F P G YL S D +KLWDL G +Y GH+ I S+ F
Sbjct: 457 SVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLA-SGTLYKDLHGHTDDITSVTF 515
Query: 151 SPDGQWIASGGEDGVVRI 168
S D IAS D VRI
Sbjct: 516 SLDSSVIASASMDNSVRI 533
Score = 182 (69.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 34/138 (24%), Positives = 65/138 (47%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
L + +D + W L + GH+ PV + ++ + ++W+
Sbjct: 354 LLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRT 413
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
R GH + + V FHP +YL +GS D ++LW ++ + + GH + + F
Sbjct: 414 YPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAF 473
Query: 151 SPDGQWIASGGEDGVVRI 168
SP+GQ++ S GED ++++
Sbjct: 474 SPNGQYLVSAGEDQLLKL 491
Score = 152 (58.6 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 33/115 (28%), Positives = 53/115 (46%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GH PV S +F L + + SI+ W+L T GH + +D P+
Sbjct: 335 LLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSL 394
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ S S D +LW R + Y GH ++ ++F P+ ++A+G D VR+
Sbjct: 395 FFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRL 449
Score = 124 (48.7 bits), Expect = 0.00044, P = 0.00044
Identities = 26/96 (27%), Positives = 42/96 (43%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H V CLA +GQ L + G+D+ + LW L L GH+ + SV F
Sbjct: 461 FTGHCGPVRCLAFSP-NGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDS 519
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV 106
+++ S++IW++ +G S + V
Sbjct: 520 SVIASASMDNSVRIWDIKSKHNSTPADGSSSELLGV 555
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 211 (79.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 56/178 (31%), Positives = 86/178 (48%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
++A+GG D V +WA I + GH + ++ + T+++G +I++WN+
Sbjct: 190 MIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLT 249
Query: 90 PTVQRT-LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
T GH + + ++ F P G+ L SGS D + LWD+R + + HS ++ I
Sbjct: 250 GKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGI 309
Query: 149 RFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHN 206
DG IAS DG+VRI +TS +LVH PP SSV FS N
Sbjct: 310 DVVWDGTLIASCATDGLVRIW------DTSTGQCLRTLVHE-DNPP---VSSVKFSPN 357
Score = 198 (74.8 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 56/171 (32%), Positives = 84/171 (49%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F+ H V +A K G +L +G D+ V LW + + + SL HS PV + +
Sbjct: 257 FIGHHNYVYAIAFSPK-GNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVV-WD 314
Query: 71 ETLSAGCQS-GSIKIWNLAVPTVQRTLNGHKSS--ITSVDFHPYGDYLCSGSLDSFIKLW 127
TL A C + G ++IW+ + RTL H+ + ++SV F P G Y+ + +LD ++LW
Sbjct: 315 GTLIASCATDGLVRIWDTSTGQCLRTLV-HEDNPPVSSVKFSPNGKYVLAWTLDDCVRLW 373
Query: 128 DLRRKGCIYTYRGHSKSINSIR--FSPDGQWI----------ASGGEDGVV 166
D C+ TY+GHS S+ F GQ I SG EDG +
Sbjct: 374 DYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAI 424
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 39/161 (24%), Positives = 80/161 (49%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWAL--GKSNCIMSLSGHSTPVESVQFGN 68
F H A ++ ++ G +A+G DDK + LW + GK++ + GH V ++ F
Sbjct: 214 FEGHLAGISTISWSP-DGATIASGSDDKTIRLWNVLTGKAHPTPFI-GHHNYVYAIAFSP 271
Query: 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
L +G ++ +W++ V ++L H ++ +D G + S + D +++WD
Sbjct: 272 KGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWD 331
Query: 129 LRRKGCIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T + ++S++FSP+G+++ + D VR+
Sbjct: 332 TSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRL 372
Score = 163 (62.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 36/114 (31%), Positives = 58/114 (50%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
L GH V +V+F +++G G++K+W + + T GH + I+++ + P G
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGA 231
Query: 114 YLCSGSLDSFIKLWD-LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
+ SGS D I+LW+ L K + GH + +I FSP G + SG D V
Sbjct: 232 TIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAV 285
Score = 149 (57.5 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 96 LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ 155
L GH +++V F P + SG D +K+W IYT+ GH I++I +SPDG
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGA 231
Query: 156 WIASGGEDGVVRI 168
IASG +D +R+
Sbjct: 232 TIASGSDDKTIRL 244
Score = 46 (21.3 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 13/58 (22%), Positives = 24/58 (41%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
+ S S D V WD+ ++ + +S + + G + T+GL V W+
Sbjct: 275 MLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGL-VRIWD 331
Score = 41 (19.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 13/56 (23%), Positives = 25/56 (44%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTE-KNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S S D+T+ W++ T + + + + FS G L+ G + V+ W+
Sbjct: 235 SGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEA-VFLWD 289
>UNIPROTKB|E1BVN4 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 EMBL:AADN02045388
EMBL:AADN02045389 IPI:IPI00572484 RefSeq:XP_413801.2
ProteinModelPortal:E1BVN4 Ensembl:ENSGALT00000007455 GeneID:415417
KEGG:gga:415417 NextBio:20819029 Uniprot:E1BVN4
Length = 395
Score = 208 (78.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 49/166 (29%), Positives = 81/166 (48%)
Query: 9 EDFMAHGASVNCLALG-KKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG 67
+ F HGA V CL L ++G +GG DKK +W + CI S H + + SV++
Sbjct: 231 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQSFETHDSDINSVRYY 290
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVDFHPYGDYLCSGSLDSFI 124
+ ++G + ++++L + + +S I +SVDF G L +G D I
Sbjct: 291 PSGDAFASGSDDATCRLYDLRADR-EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTI 349
Query: 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
+WD+ + + GH ++++R SPDG SG D +RI A
Sbjct: 350 NVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRIWA 395
Score = 175 (66.7 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 40/150 (26%), Positives = 73/150 (48%)
Query: 27 SGQVLATGGDDKKVNLWAL--GKSNCIM----SLSGHSTPVESVQFGNGEETLSAGCQSG 80
SG +A GG D K +++ L K+ + S++ H+ + + F N + + G
Sbjct: 158 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG 217
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+ +W++ + ++ +GH + + +D P G+ SG D +WD+R CI ++
Sbjct: 218 TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQSF 277
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
H INS+R+ P G ASG +D R+
Sbjct: 278 ETHDSDINSVRYYPSGDAFASGSDDATCRL 307
Score = 53 (23.7 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG 340
D T+N WD+ K S VS + + + L S G G
Sbjct: 346 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSG 385
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 211 (79.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 49/141 (34%), Positives = 73/141 (51%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAV 89
L +G + V W +N + ++S H+ V + F N + L+ G S +IKIWN
Sbjct: 192 LLSGDQNGTVKYWQPNFNN-VNNISAHANGVRDIAFSPNDSKFLTCGDDS-AIKIWNFNN 249
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+RTL+GH + S D+HP + SGS D+ +KLWD R C+ T G ++N R
Sbjct: 250 GKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTR 309
Query: 150 FSPDG--QWIASGGEDGVVRI 168
F P+G + +AS D RI
Sbjct: 310 FQPNGTARLLASVSRDRSCRI 330
Score = 143 (55.4 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 36/142 (25%), Positives = 65/142 (45%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ L + LW N + H +P+ ++++ N +E L +G Q+G++K W
Sbjct: 147 GRRLLVASHSGEFTLWNGMTFNFETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQP 206
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
V ++ H + + + F P +L G DS IK+W+ T GH +
Sbjct: 207 NFNNVNN-ISAHANGVRDIAFSPNDSKFLTCGD-DSAIKIWNFNNGKEERTLSGHHWEVK 264
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
S + P+ I SG +D +V++
Sbjct: 265 SADWHPNLGLIVSGSKDNLVKL 286
Score = 130 (50.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 35/142 (24%), Positives = 59/142 (41%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
AH V +A + L T GDD + +W +LSGH V+S +
Sbjct: 216 AHANGVRDIAFSPNDSKFL-TCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGL 274
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSLDSFIKLWDLR 130
+ +G + +K+W+ TL+G K ++ F P G L S S D +++DLR
Sbjct: 275 IVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLR 334
Query: 131 RKGCIYTYRGHSKSINSIRFSP 152
+ R ++ + + P
Sbjct: 335 TMKDMLVIRDSETDLSCVAWHP 356
Score = 57 (25.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 14/45 (31%), Positives = 17/45 (37%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL 338
L S S D V WD + VST T+ + F G L
Sbjct: 274 LIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARL 318
Score = 50 (22.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVR 167
H K+I+++ + P G + + G D R
Sbjct: 415 HEKAIHAVEYHPLGHLLCTAGSDKTAR 441
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 211 (79.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 49/141 (34%), Positives = 73/141 (51%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAV 89
L +G + V W +N + ++S H+ V + F N + L+ G S +IKIWN
Sbjct: 192 LLSGDQNGTVKYWQPNFNN-VNNISAHANGVRDIAFSPNDSKFLTCGDDS-AIKIWNFNN 249
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+RTL+GH + S D+HP + SGS D+ +KLWD R C+ T G ++N R
Sbjct: 250 GKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTR 309
Query: 150 FSPDG--QWIASGGEDGVVRI 168
F P+G + +AS D RI
Sbjct: 310 FQPNGTARLLASVSRDRSCRI 330
Score = 143 (55.4 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 36/142 (25%), Positives = 65/142 (45%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ L + LW N + H +P+ ++++ N +E L +G Q+G++K W
Sbjct: 147 GRRLLVASHSGEFTLWNGMTFNFETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQP 206
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
V ++ H + + + F P +L G DS IK+W+ T GH +
Sbjct: 207 NFNNVNN-ISAHANGVRDIAFSPNDSKFLTCGD-DSAIKIWNFNNGKEERTLSGHHWEVK 264
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
S + P+ I SG +D +V++
Sbjct: 265 SADWHPNLGLIVSGSKDNLVKL 286
Score = 130 (50.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 35/142 (24%), Positives = 59/142 (41%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
AH V +A + L T GDD + +W +LSGH V+S +
Sbjct: 216 AHANGVRDIAFSPNDSKFL-TCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGL 274
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSLDSFIKLWDLR 130
+ +G + +K+W+ TL+G K ++ F P G L S S D +++DLR
Sbjct: 275 IVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLR 334
Query: 131 RKGCIYTYRGHSKSINSIRFSP 152
+ R ++ + + P
Sbjct: 335 TMKDMLVIRDSETDLSCVAWHP 356
Score = 57 (25.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 14/45 (31%), Positives = 17/45 (37%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL 338
L S S D V WD + VST T+ + F G L
Sbjct: 274 LIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARL 318
Score = 50 (22.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVR 167
H K+I+++ + P G + + G D R
Sbjct: 415 HEKAIHAVEYHPLGHLLCTAGSDKTAR 441
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 188 (71.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 38/99 (38%), Positives = 58/99 (58%)
Query: 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAVPTVQRT 95
DK V LW+ + N + +GH PV S+ F NG+ SAG + +K+W+LA T+ +
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAG-EDQRLKLWDLASGTLFKE 59
Query: 96 LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC 134
L GH SITS+ F P + S S+D+ +++WD+R C
Sbjct: 60 LRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCC 98
Score = 164 (62.8 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 33/88 (37%), Positives = 45/88 (51%)
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
++++W+ R GH+ + S+ F P G YL S D +KLWDL RG
Sbjct: 3 TVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRG 62
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRI 168
H+ SI S+ FSPD IAS D VR+
Sbjct: 63 HTDSITSLAFSPDSGLIASASMDNSVRV 90
Score = 108 (43.1 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 21/96 (21%), Positives = 42/96 (43%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H V L+ +G+ LA+ G+D+++ LW L L GH+ + S+ F
Sbjct: 18 FTGHRGPVLSLSFSP-NGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDS 76
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSV 106
+++ S+++W++ +G + V
Sbjct: 77 GLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGV 112
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 212 (79.7 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 40/137 (29%), Positives = 68/137 (49%)
Query: 32 ATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPT 91
+T D+ LW+ ++ + +GH + V+ V+F ++ G ++++W+
Sbjct: 412 STASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGA 471
Query: 92 VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151
R GH+ + ++ F P G YL S D +KLWDL G RGH+ +I+S+ FS
Sbjct: 472 SVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFS 531
Query: 152 PDGQWIASGGEDGVVRI 168
D +AS D VR+
Sbjct: 532 QDSSLVASASMDNTVRV 548
Score = 192 (72.6 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 39/133 (29%), Positives = 63/133 (47%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
L + +D V W L + GH+ PV V S + ++W+ A
Sbjct: 369 LLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFART 428
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
R GH S + V FHP +Y+ +GS D ++LW R+ + + GH + ++ F
Sbjct: 429 YPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAF 488
Query: 151 SPDGQWIASGGED 163
SP+G+++AS GED
Sbjct: 489 SPNGKYLASAGED 501
Score = 184 (69.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 45/152 (29%), Positives = 78/152 (51%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NG 69
+ H + V+C+ S + ATG DK V LW+ + + +GH PV ++ F NG
Sbjct: 434 YAGHLSDVDCVKFHPNSNYI-ATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNG 492
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
+ SAG + +K+W+LA + + L GH +I+S+ F + S S+D+ +++WD+
Sbjct: 493 KYLASAG-EDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDI 551
Query: 130 RRK-------GC----IYTYRGHSKSINSIRF 150
R GC I Y G + +I +++F
Sbjct: 552 RNAHGSAPTDGCSSELIGQYTGSTSNILNVQF 583
Score = 153 (58.9 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 48/168 (28%), Positives = 73/168 (43%)
Query: 1 MRAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
+RA+ KA H A V+ + L + VL DD+ A G I +L GHS P
Sbjct: 309 LRARKLKAGP---HKADVSKIRL---ACDVLEEEADDED----ASGSE--IKTLRGHSGP 356
Query: 61 VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL 120
V F L + + +++ W+L T GH + VD P Y + S
Sbjct: 357 VYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASH 416
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
D +LW R + Y GH ++ ++F P+ +IA+G D VR+
Sbjct: 417 DRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRL 464
Score = 47 (21.6 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
L S+S D TV WD+ + T+ SS +
Sbjct: 536 LVASASMDNTVRVWDIRNAHGSAPTDGCSSEL 567
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 197 (74.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 42/179 (23%), Positives = 84/179 (46%)
Query: 8 AEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNC-----IMSLSGHSTPVE 62
++ +H +V+ + G++LA+ DK + + + N + +GH +
Sbjct: 17 SQTLTSHNRAVSSVKFSS-DGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGIS 75
Query: 63 SVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS 122
V F + + + ++K+W++ ++ +TL GH + V+F+P + + SGS D
Sbjct: 76 DVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDE 135
Query: 123 FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI--GASFHLTNTSI 179
+++WD+ C+ HS + ++ F+ DG I S DG+ RI + H T I
Sbjct: 136 TVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 194
Score = 170 (64.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 40/160 (25%), Positives = 75/160 (46%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSL-SGHSTPVESVQFGNGEE 71
AH V + + G ++ + D +W G +C+ +L + PV V+F +
Sbjct: 153 AHSDPVTAVDFNR-DGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGK 211
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS---ITSVDFHPYGDYLCSGSLDSFIKLWD 128
+ G ++++WN++ +T GH ++ I+S G + SGS D+ + +W+
Sbjct: 212 FILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE 271
Query: 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
L K + GH++++ ++ P IASG D VRI
Sbjct: 272 LNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRI 311
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 26/110 (23%), Positives = 54/110 (49%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ--FG--NGEETLSAGCQSGSI 82
+G+ + G D + LW + + + + +GH + F NG+ +S G + +
Sbjct: 209 NGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVS-GSEDNCV 267
Query: 83 KIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+W L + + L GH ++ +V HP + + SGSLD +++W +++
Sbjct: 268 HMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
Score = 47 (21.6 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
S S D V+ W+L L+ E ++ T+
Sbjct: 260 SGSEDNCVHMWELNSKKLLQKLEGHTETV 288
Score = 41 (19.5 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 294 LTTSSSADRTVNFWDLEK 311
L S S D+TV W +K
Sbjct: 299 LIASGSLDKTVRIWTQKK 316
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 218 (81.8 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 49/167 (29%), Positives = 78/167 (46%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKS-NCIMSLSGHSTPVESV 64
EK F AH + L + + L T DD + + S C+ + GHS V S+
Sbjct: 89 EKVTQFEAHPDYIRALVV-HPTQPFLLTSSDDMTIKCFNWDMSWKCVQTFEGHSRYVMSL 147
Query: 65 QFGNGE-ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSLD 121
+ T ++ C G++K+W+ TL H + V+++P GD YL + D
Sbjct: 148 AINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDD 207
Query: 122 SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ IK+WD + K C+ GH+ +++ F I SG EDG V+I
Sbjct: 208 NLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKI 254
Score = 153 (58.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 47/165 (28%), Positives = 70/165 (42%)
Query: 9 EDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-- 66
+ F H V LA+ K A+ D V +W+ G S +L H V V +
Sbjct: 135 QTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQAHDRGVNYVNYYP 194
Query: 67 -GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
G+ ++AG IK+W+ R L GH ++++ FH + SGS D +K
Sbjct: 195 AGDKPYLITAG-DDNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSEDGTVK 253
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSPDGQW-IASGGEDGVVRIG 169
+W I KS N FS D W IA ++G+V +G
Sbjct: 254 IWHTLSYSLI-------KSYN---FSLDRAWCIAQNKDNGLVTVG 288
Score = 129 (50.5 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 39/164 (23%), Positives = 67/164 (40%)
Query: 39 KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG 98
+V +W + S + P+ + F + G ++++N
Sbjct: 37 QVGIWNYNTQTLVRSFDINDVPIRACAFIARKNWFVCGSDDFQVRVYNYNTGEKVTQFEA 96
Query: 99 HKSSITSVDFHPYGDYLCSGSLDSFIKL--WDLRRKGCIYTYRGHSKSINSIRFSP-DGQ 155
H I ++ HP +L + S D IK WD+ K C+ T+ GHS+ + S+ +P D
Sbjct: 97 HPDYIRALVVHPTQPFLLTSSDDMTIKCFNWDMSWK-CVQTFEGHSRYVMSLAINPKDTN 155
Query: 156 WIASGGEDGVVRI---GASFHLTNTSIHVVDLSLV--HPLGTPP 194
AS DG V++ G+S H ++ V +P G P
Sbjct: 156 TFASSCLDGTVKVWSFGSSVANFTLQAHDRGVNYVNYYPAGDKP 199
Score = 44 (20.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVST 317
F + S S D TV W +SL+ +
Sbjct: 240 FPIIISGSEDGTVKIWHTLSYSLIKS 265
Score = 42 (19.8 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 10/58 (17%), Positives = 26/58 (44%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
+++T D + WD + + V E +++ + F ++ G +G +K++
Sbjct: 200 YLITAGD--DNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIW 255
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 163 (62.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 31/88 (35%), Positives = 52/88 (59%)
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
+IK+W+ RT++GH +++SV P GD++ S S D IK+W+++ C+ T+ G
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRI 168
H + + +R + DG IAS D VR+
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRV 89
Score = 141 (54.7 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 40/142 (28%), Positives = 64/142 (45%)
Query: 40 VNLWALGKSNCIMSLSGHSTPVESVQF-GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG 98
+ LW CI ++ GH V SV NG+ +SA + +IK+W + +T G
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS-RDKTIKMWEVQTGYCVKTFTG 61
Query: 99 HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWI- 157
H+ + V + G + S S D +++W + K C R H + I ++P+ +
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSS 121
Query: 158 ---ASG---GEDGVVRIGASFH 173
A+G G D VR G FH
Sbjct: 122 ISEATGSEVGHDNWVR-GVLFH 142
Score = 133 (51.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115
GH V V F +G + + + ++++W+ +TLN H+ +TS+DFH Y+
Sbjct: 131 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 190
Query: 116 CSGSLDSFIKLWDLR 130
+GS+D +K+W+ R
Sbjct: 191 VTGSVDQTVKVWECR 205
Score = 129 (50.5 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 31/143 (21%), Positives = 64/143 (44%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
+ G ++A+ +D+ V +W + C L H VE + + E + S+ ++ ++
Sbjct: 73 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP-ESSYSSISEATGSEV- 130
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI 145
GH + + V FH G ++ S + D +++WD + K C+ T H +
Sbjct: 131 ------------GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV 178
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
S+ F ++ +G D V++
Sbjct: 179 TSLDFHKTAPYVVTGSVDQTVKV 201
Score = 108 (43.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 34/156 (21%), Positives = 68/156 (43%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H +V+ +A+ +G + + DK + +W + C+ + +GH V V+ N + TL
Sbjct: 20 HDHNVSSVAI-MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR-PNQDGTL 77
Query: 74 SAGCQSG-SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
A C + ++++W +A + L H+ + + + P Y S I
Sbjct: 78 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY-------SSIS----EAT 126
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
G + GH + + F G++I S +D +R+
Sbjct: 127 G---SEVGHDNWVRGVLFHSGGKFILSCADDKTLRV 159
Score = 49 (22.3 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
FIL S + D+T+ WD + + T + + L F + ++ G + +KV W
Sbjct: 147 FIL--SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--W 202
Query: 351 E 351
E
Sbjct: 203 E 203
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 163 (62.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 31/88 (35%), Positives = 52/88 (59%)
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
+IK+W+ RT++GH +++SV P GD++ S S D IK+W+++ C+ T+ G
Sbjct: 5 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 64
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRI 168
H + + +R + DG IAS D VR+
Sbjct: 65 HREWVRMVRPNQDGTLIASCSNDQTVRV 92
Score = 133 (51.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 56 GHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL 115
GH V V F +G + + + ++++W+ +TLN H+ +TS+DFH Y+
Sbjct: 134 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 193
Query: 116 CSGSLDSFIKLWDLR 130
+GS+D +K+W+ R
Sbjct: 194 VTGSVDQTVKVWECR 208
Score = 129 (50.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/143 (21%), Positives = 64/143 (44%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
+ G ++A+ +D+ V +W + C L H VE + + E + S+ ++ ++
Sbjct: 76 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP-ESSYSSISEATGSEV- 133
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSI 145
GH + + V FH G ++ S + D +++WD + K C+ T H +
Sbjct: 134 ------------GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV 181
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
S+ F ++ +G D V++
Sbjct: 182 TSLDFHKTAPYVVTGSVDQTVKV 204
Score = 108 (43.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 34/156 (21%), Positives = 68/156 (43%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H +V+ +A+ +G + + DK + +W + C+ + +GH V V+ N + TL
Sbjct: 23 HDHNVSSVAI-MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR-PNQDGTL 80
Query: 74 SAGCQSG-SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
A C + ++++W +A + L H+ + + + P Y S I
Sbjct: 81 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY-------SSIS----EAT 129
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
G + GH + + F G++I S +D +R+
Sbjct: 130 G---SEVGHDNWVRGVLFHSGGKFILSCADDKTLRV 162
Score = 49 (22.3 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGW 350
FIL S + D+T+ WD + + T + + L F + ++ G + +KV W
Sbjct: 150 FIL--SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--W 205
Query: 351 E 351
E
Sbjct: 206 E 206
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 192 (72.6 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 49/177 (27%), Positives = 82/177 (46%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ L TG +D+++ LW L SGH + S+ F + + +G + ++W+
Sbjct: 372 GKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWD- 430
Query: 88 AVPTVQRTLNGH-KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
V T Q L ++ +T++ P ++ GSLD I++W + + GH +S+
Sbjct: 431 -VETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGT-LVERLEGHKESVY 488
Query: 147 SIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPF 203
SI FSPD + SG D +++ + L T V LS + P G YT F
Sbjct: 489 SIAFSPDSSILLSGSLDKTIKV---WELQAT--RSVGLSAIKPEGICKATYTGHTDF 540
Score = 177 (67.4 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 50/163 (30%), Positives = 74/163 (45%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
V +A+ Q +A G D+ + +W++ + L GH V S+ F L +G
Sbjct: 446 VTAIAISPND-QFIAVGSLDQIIRVWSVS-GTLVERLEGHKESVYSIAFSPDSSILLSGS 503
Query: 78 QSGSIKIWNL-AVPTV-----------QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
+IK+W L A +V + T GH + SV P + SGS D ++
Sbjct: 504 LDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQ 563
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WDL+ T +GH S+ S+ FSPDG+ ASG D RI
Sbjct: 564 FWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARI 606
Score = 173 (66.0 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 46/158 (29%), Positives = 78/158 (49%)
Query: 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHST-P-----VESVQFGNGE 70
SV C +G+ LATG + + N++ + + +L S P V ++ F
Sbjct: 314 SVVCCVKFSNNGKYLATGCN-QAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDG 372
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ L G + IK+W+L+ V+ +GH+ I S+DF G ++ SGS D +LWD+
Sbjct: 373 KYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVE 432
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
CI + + +I SP+ Q+IA G D ++R+
Sbjct: 433 TGQCILKLEIEN-GVTAIAISPNDQFIAVGSLDQIIRV 469
Score = 152 (58.6 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 40/128 (31%), Positives = 66/128 (51%)
Query: 49 NCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS------ 102
N + +L H + V V+F N + L+ GC + +++ V T ++ H+ S
Sbjct: 305 NLVHTLE-HPSVVCCVKFSNNGKYLATGCNQAA-NVFD--VQTGKKLFTLHEESPDPSRD 360
Query: 103 --ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG 160
+ ++ F P G YL +G+ D IKLWDL + Y + GH + I S+ FS +G++I SG
Sbjct: 361 LYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSG 420
Query: 161 GEDGVVRI 168
D R+
Sbjct: 421 SGDRTARL 428
Score = 67 (28.6 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE-GLKVYGWEPA 353
S S DR++ FWDL+ T + + +++ + FS G G + +++ +PA
Sbjct: 555 SGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSIDPA 612
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 204 (76.9 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 47/166 (28%), Positives = 81/166 (48%)
Query: 9 EDFMAHGASVNCLALG-KKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG 67
+ F HGA V CL L ++G +GG DKK +W + C+ + H + V SV++
Sbjct: 189 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYY 248
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVDFHPYGDYLCSGSLDSFI 124
+ ++G + ++++L + + +S I +SVDF G L +G D I
Sbjct: 249 PSGDAFASGSDDATCRLYDLRADR-EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTI 307
Query: 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
+WD+ + + GH ++++R SPDG SG D +R+ A
Sbjct: 308 NVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 353
Score = 172 (65.6 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 38/150 (25%), Positives = 72/150 (48%)
Query: 27 SGQVLATGGDDKKVNLWAL--GKSNCIM----SLSGHSTPVESVQFGNGEETLSAGCQSG 80
SG +A GG D K +++ L K+ + S++ H+ + + F N + + G
Sbjct: 116 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG 175
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+ +W++ + ++ +GH + + +D P G+ SG D +WD+R C+ +
Sbjct: 176 TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF 235
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
H +NS+R+ P G ASG +D R+
Sbjct: 236 ETHESDVNSVRYYPSGDAFASGSDDATCRL 265
Score = 54 (24.1 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
D T+N WD+ K S VS + + + L S G G + L+V+
Sbjct: 304 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 204 (76.9 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 47/166 (28%), Positives = 81/166 (48%)
Query: 9 EDFMAHGASVNCLALG-KKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG 67
+ F HGA V CL L ++G +GG DKK +W + CI + H + + SV++
Sbjct: 190 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYY 249
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVDFHPYGDYLCSGSLDSFI 124
+ ++G + ++++L + + +S I +SVDF G L +G D I
Sbjct: 250 PSGDAFASGSDDATCRLYDLRADR-EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTI 308
Query: 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
+WD+ + + GH ++++R SPDG SG D +R+ A
Sbjct: 309 NVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354
Score = 169 (64.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 40/151 (26%), Positives = 73/151 (48%)
Query: 27 SGQVLATGGDDKKVNLWAL--GKSNCIM----SLSGHSTPVESVQFGNGE-ETLSAGCQS 79
SG +A GG D K +++ L K+ + S++ H+ + + F N + + +
Sbjct: 116 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQQILTASGD 175
Query: 80 GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGCIYT 137
G+ +W++ + ++ +GH + + +D P G+ SG D +WD+R CI
Sbjct: 176 GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQA 235
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ H INS+R+ P G ASG +D R+
Sbjct: 236 FETHESDINSVRYYPSGDAFASGSDDATCRL 266
Score = 151 (58.2 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 40/145 (27%), Positives = 66/145 (45%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG---NGEETLSAGCQSGSIKIW 85
Q+L GD LW + + S GH V + G +S GC ++ +W
Sbjct: 168 QILTASGDGTCA-LWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAM-VW 225
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR--RKGCIYTYRGHSK 143
++ + H+S I SV ++P GD SGS D+ +L+DLR R+ IY+
Sbjct: 226 DMRSGQCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIF 285
Query: 144 SINSIRFSPDGQWIASGGEDGVVRI 168
+S+ FS G+ + +G D + +
Sbjct: 286 GASSVDFSLSGRLLFAGYNDYTINV 310
Score = 54 (24.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
D T+N WD+ K S VS + + + L S G G + L+V+
Sbjct: 305 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 201 (75.8 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 43/145 (29%), Positives = 72/145 (49%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
+ GQ +A+ G DK + ++ ++ + H V F + + ++ +KIW
Sbjct: 625 QDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIW 684
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYL--CSGSLDSFIKLWDLRRKGCIYTYRGHSK 143
+ A + T + H + F ++L +GS D F+KLWDL +K C T GH+
Sbjct: 685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTN 744
Query: 144 SINSIRFSPDGQWIASGGEDGVVRI 168
S+N RFSPD + +AS DG +R+
Sbjct: 745 SVNHCRFSPDDELLASCSADGTLRL 769
Score = 160 (61.4 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 45/147 (30%), Positives = 61/147 (41%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
EK D AH V C A + AT DKKV +W + + HS V
Sbjct: 648 EKLLDIKAHEDEVLCCAFSSDDSYI-ATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCH 706
Query: 66 FGNGEE--TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
F N L+ G +K+W+L + T+ GH +S+ F P + L S S D
Sbjct: 707 FTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGT 766
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRF 150
++LWD+R KSIN RF
Sbjct: 767 LRLWDVRSAN-------ERKSINVKRF 786
Score = 140 (54.3 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 14 HGASVNCLALGKKSGQVL-ATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
H VNC KS +L ATG +D + LW L + C ++ GH+ V +F +E
Sbjct: 698 HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDEL 757
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDY-----LCSGSLD------ 121
L++ G++++W++ ++++N + ++S D P D CS S D
Sbjct: 758 LASCSADGTLRLWDVRSANERKSINVKRFFLSSED--PPEDVEVIVKCCSWSADGDKIIV 815
Query: 122 ---SFIKLWDLRRKGCIYT-YRGHSKSINSIRFSP 152
+ + L+D+ G + + GH +I FSP
Sbjct: 816 AAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP 850
Score = 140 (54.3 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 32/141 (22%), Positives = 61/141 (43%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ L + +D + +W + + L H V+ + LS G++K+WN+
Sbjct: 1015 GKTLISSSEDSVIQVWNWQTGDYVF-LQAHQETVKDFRLLQDSRLLSWSFD-GTVKVWNV 1072
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
++R H+ ++ S S S D K+W ++ +GH+ +
Sbjct: 1073 ITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRC 1132
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
FS DG +A+G ++G +RI
Sbjct: 1133 SAFSLDGILLATGDDNGEIRI 1153
Score = 114 (45.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 98 GHKSSITSVDFHPYGDYLCSGSLDSF-IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQW 156
GH S+I DF PY D+L +L + ++LW++ + + RGH ++ + FSPDG
Sbjct: 838 GHHSTIQYCDFSPY-DHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSS 896
Query: 157 IASGGEDGVVRI 168
+ +D +R+
Sbjct: 897 FLTASDDQTIRV 908
Score = 111 (44.1 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 41/166 (24%), Positives = 68/166 (40%)
Query: 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG 69
D++ A V+C L + +A G +D + + L + S GH V +QF
Sbjct: 957 DYLPE-AQVSCCCLSPHL-EYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTAD 1014
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDY-LCSGSLDSFIKLWD 128
+TL + + I++WN L H+ ++ DF D L S S D +K+W+
Sbjct: 1015 GKTLISSSEDSVIQVWNWQTGDYV-FLQAHQETVK--DFRLLQDSRLLSWSFDGTVKVWN 1071
Query: 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHL 174
+ + H ++ S S D +S D +I SF L
Sbjct: 1072 VITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW-SFDL 1116
Score = 66 (28.3 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 296 TSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
+S+SAD+T W + S + + ++ +R FS G L GD G
Sbjct: 1101 SSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNG 1149
Score = 39 (18.8 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 429 FLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAVLRNR 466
FL +T + + +S L+S F+G K+ V+ R
Sbjct: 1039 FLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGR 1076
Score = 38 (18.4 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRR----LTFSEGGECLLGGDT-EGLKVYGWE 351
++S D+T+ W+ +K KNS+ + + + F E +L D GL++ +
Sbjct: 899 TASDDQTIRVWETKKVC------KNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGK 952
Query: 352 PARQYDAQP 360
Q D P
Sbjct: 953 TG-QIDYLP 960
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 196 (74.1 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 53/167 (31%), Positives = 77/167 (46%)
Query: 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN-LAVPTVQRT 95
DK + LW L + GH+ V SV F + +G + +IK+WN L T
Sbjct: 84 DKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNTLGDCKYTIT 143
Query: 96 LNGHKSSITSVDF--HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPD 153
GH ++ V F +P + S D +K+W+L + GH+ IN++ SPD
Sbjct: 144 DKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPD 203
Query: 154 GQWIASGGEDGVVRI---GASFHLTNTSIHVVDLSLVHPLGTPPPQY 197
G ASGG+DGV + S HL S+H D +H L P +Y
Sbjct: 204 GSLCASGGKDGVTMLWDLNESKHLY--SLHAGDE--IHALVFSPNRY 246
Score = 183 (69.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 54/165 (32%), Positives = 81/165 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIM-----SLSGHSTPV-ESVQFG 67
H V LA ++ +L +G DK + +W L + SL GHS V + V
Sbjct: 14 HNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVISS 73
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+G LSA S+++W L+ RT GH + + SV F + SGS D IKLW
Sbjct: 74 DGAYALSASWDK-SLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLW 132
Query: 128 DLRRKGCIYTY--RGHSKSINSIRFSPDGQ--WIASGGEDGVVRI 168
+ C YT +GH++ ++ +RFSP+ Q I S G D +V++
Sbjct: 133 NTLGD-CKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKV 176
Score = 136 (52.9 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 35/122 (28%), Positives = 57/122 (46%)
Query: 53 SLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNL-----AVPTVQRTLNGHKSSITSV 106
+L GH+ V S+ L +G + ++ IWNL A +R+L GH ++
Sbjct: 10 TLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDC 69
Query: 107 DFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
G Y S S D ++LW+L T+ GH+ + S+ FS D + I SG D +
Sbjct: 70 VISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTI 129
Query: 167 RI 168
++
Sbjct: 130 KL 131
Score = 58 (25.5 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 19/76 (25%), Positives = 33/76 (43%)
Query: 276 VSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGE 335
VS S PQ+P++ S+ D+ V W+L L + ++ I +T S G
Sbjct: 151 VSCVRFSPNPQNPVI-----VSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGS 205
Query: 336 CLLGGDTEGLKVYGWE 351
G +G+ + W+
Sbjct: 206 LCASGGKDGVTML-WD 220
Score = 46 (21.3 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 703 DFEVPTKESEIYPTYVRKGPDMYGPQ 728
D E +K E+ P Y+ KG P+
Sbjct: 260 DLEKKSKVDELKPEYIEKGKKSREPE 285
Score = 38 (18.4 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 297 SSSADRTVNFWD 308
S S DRT+ W+
Sbjct: 122 SGSRDRTIKLWN 133
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 212 (79.7 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 45/155 (29%), Positives = 76/155 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C+A+ + Q TG D+ + +W L +SL+GH + V V L
Sbjct: 203 HLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYL 261
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + +K W+L V R +GH S++ +D HP D L + S DS ++WD+R K
Sbjct: 262 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKA 321
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++T GH+ ++ ++R I +G D +R+
Sbjct: 322 SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRL 356
Score = 182 (69.1 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 42/139 (30%), Positives = 67/139 (48%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
VL T D +W + + +LSGH+ V +V+ E + G +I++W+L
Sbjct: 302 VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVA 361
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+ TL HK S+ +V HP SGS D+ IK W G I GH+ IN++
Sbjct: 362 GKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDN-IKQWKFPDGGFIQNLSGHNAIINTLA 420
Query: 150 FSPDGQWIASGGEDGVVRI 168
+ DG + SG ++G + +
Sbjct: 421 VNTDGV-LVSGADNGTMHL 438
Score = 151 (58.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 38/152 (25%), Positives = 69/152 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++V + + +S + + G +DK+V W L + I GH + V + + L
Sbjct: 245 HISTVRGVIVSTRSPYLFSCG-EDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVL 303
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + +IW++ TL+GH +++ +V + +GS D+ I+LWDL
Sbjct: 304 VTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGK 363
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
T H KS+ ++ P ASG D +
Sbjct: 364 TRVTLTNHKKSVRAVVLHPLHYTFASGSPDNI 395
Score = 137 (53.3 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 42/159 (26%), Positives = 66/159 (41%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
+SGH V + G + G +IKIW+LA ++ +L GH S++ V
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173
YL S D +K WDL I Y GH ++ + P + + D RI
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV-- 317
Query: 174 LTNTSIHVVDLSLVHPLGTPPPQYTSS--VPFSHNTSLR 210
T S+H + + + T Q + SH+T++R
Sbjct: 318 RTKASVHTLS-GHTNAVATVRCQAAEPQIITGSHDTTIR 355
Score = 42 (19.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 9/56 (16%), Positives = 21/56 (37%)
Query: 295 TTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350
T +S + + W + +++ I L + G + G D + ++ W
Sbjct: 386 TFASGSPDNIKQWKFPDGGFIQNLSGHNAIINTLAVNTDGVLVSGADNGTMHLWDW 441
Score = 40 (19.1 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 10/50 (20%), Positives = 18/50 (36%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLK 346
+ S D T+ WDL T + ++R + G + +K
Sbjct: 347 TGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDNIK 396
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 203 (76.5 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 46/166 (27%), Positives = 81/166 (48%)
Query: 9 EDFMAHGASVNCLALG-KKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG 67
+ F HGA V CL L ++G +GG DKK +W + C+ + H + + SV++
Sbjct: 189 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYY 248
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVDFHPYGDYLCSGSLDSFI 124
+ ++G + ++++L + + +S I +SVDF G L +G D I
Sbjct: 249 PSGDAFASGSDDATCRLYDLRADR-EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTI 307
Query: 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
+WD+ + + GH ++++R SPDG SG D +R+ A
Sbjct: 308 NVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 353
Score = 173 (66.0 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 39/150 (26%), Positives = 72/150 (48%)
Query: 27 SGQVLATGGDDKKVNLWAL--GKSNCIM----SLSGHSTPVESVQFGNGEETLSAGCQSG 80
SG +A GG D K +++ L K+ + S++ H+ + + F N + + G
Sbjct: 116 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG 175
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+ +W++ + ++ +GH + + +D P G+ SG D +WD+R C+ +
Sbjct: 176 TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF 235
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
H INS+R+ P G ASG +D R+
Sbjct: 236 ETHESDINSVRYYPSGDAFASGSDDATCRL 265
Score = 54 (24.1 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
D T+N WD+ K S VS + + + L S G G + L+V+
Sbjct: 304 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 203 (76.5 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 46/166 (27%), Positives = 81/166 (48%)
Query: 9 EDFMAHGASVNCLALG-KKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG 67
+ F HGA V CL L ++G +GG DKK +W + C+ + H + + SV++
Sbjct: 189 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYY 248
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVDFHPYGDYLCSGSLDSFI 124
+ ++G + ++++L + + +S I +SVDF G L +G D I
Sbjct: 249 PSGDAFASGSDDATCRLYDLRADR-EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTI 307
Query: 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
+WD+ + + GH ++++R SPDG SG D +R+ A
Sbjct: 308 NVWDVLKGARVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 353
Score = 173 (66.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 39/150 (26%), Positives = 72/150 (48%)
Query: 27 SGQVLATGGDDKKVNLWAL--GKSNCIM----SLSGHSTPVESVQFGNGEETLSAGCQSG 80
SG +A GG D K +++ L K+ + S++ H+ + + F N + + G
Sbjct: 116 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG 175
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+ +W++ + ++ +GH + + +D P G+ SG D +WD+R C+ +
Sbjct: 176 TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF 235
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
H INS+R+ P G ASG +D R+
Sbjct: 236 ETHESDINSVRYYPSGDAFASGSDDATCRL 265
Score = 51 (23.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
D T+N WD+ K + VS + + + L S G G + L+V+
Sbjct: 304 DYTINVWDVLKGARVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 198 (74.8 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 38/135 (28%), Positives = 72/135 (53%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LA+G D +N++ + + +L GH+ P+ S+ F + L G IKI+++
Sbjct: 160 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
+ TL+GH S + +V F P + S S D +K+WD+ + C++T+ H +
Sbjct: 220 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWG 279
Query: 148 IRFSPDGQWIASGGE 162
++++ +G I S G+
Sbjct: 280 VKYNGNGSKIVSVGD 294
Score = 181 (68.8 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 37/139 (26%), Positives = 67/139 (48%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
+ A+ D + LW L I S+ ++ F + L+ G G + I+ +
Sbjct: 78 IAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVES 137
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+ +L+ I S+ + P G YL SG++D I ++D+ ++T GH+ I S+
Sbjct: 138 GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 197
Query: 150 FSPDGQWIASGGEDGVVRI 168
FSPD Q + + +DG ++I
Sbjct: 198 FSPDSQLLVTASDDGYIKI 216
Score = 165 (63.1 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 43/148 (29%), Positives = 69/148 (46%)
Query: 21 LALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG 80
LA S Q LATG KVN++ + SL + S+ + + L++G G
Sbjct: 112 LAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
I I+++A + TL GH I S+ F P L + S D +IK++D++ T G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRI 168
H+ + ++ F PD S D V++
Sbjct: 231 HASWVLNVAFCPDDTHFVSSSSDKSVKV 258
Score = 143 (55.4 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 40/161 (24%), Positives = 74/161 (45%)
Query: 13 AHGASVNCLALG---KKSGQVLATGGDDKKVNLWALGKSNCIM--SLSGHSTPVESVQFG 67
AH ++ +A G K++ + + TG D V +W + SL GH V SV
Sbjct: 14 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDIS 73
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ ++ I++W+L ++++ ++ F P YL +G+ + ++
Sbjct: 74 HTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIF 133
Query: 128 DLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ Y+ K I SI +SPDG+++ASG DG++ I
Sbjct: 134 GVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 174
Score = 127 (49.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 69/293 (23%), Positives = 119/293 (40%)
Query: 57 HSTPVESVQFGNGE----ETLSAGCQSGSIKIWNLAVPTV--QRTLNGHKSSITSVDFHP 110
H + SV +G + ET+ G +K+W + Q +L GH+ + SVD
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH 74
Query: 111 YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-G 169
S SLD+ I+LWDL I + ++ FSPD Q++A+G G V I G
Sbjct: 75 TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFG 134
Query: 170 ASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVTR 229
S+ ++ +P +Y +S ++ T G+ T +
Sbjct: 135 VESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-GKLLHT-LEGHAMP 192
Query: 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSLNRSGTCVPVSVSRTSLSILPQSPM 289
I S D +L T A+ Y I+ + N +GT + +++ P
Sbjct: 193 IRSLTFSPDS----QLLVT-ASDDGYIKIYDVQHA-NLAGTLSGHASWVLNVAFCPDDTH 246
Query: 290 LCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG-GD 341
F+ SSS+D++V WD+ + V T + + + ++ G ++ GD
Sbjct: 247 --FV---SSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGD 294
Score = 75 (31.5 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
S + D +N +D+ L+ T E ++ IR LTFS + L+ +G +K+Y
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 203 (76.5 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 44/156 (28%), Positives = 78/156 (50%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V +A+ + Q TG D+ + +W L +SL+GH + V V N L
Sbjct: 207 HLGWVRSIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSPYL 265
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + +K W+L V R +GH S++ +D HP D L + S D+ ++WD+R K
Sbjct: 266 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKA 325
Query: 134 CIYTYRGHSKSINSIRF-SPDGQWIASGGEDGVVRI 168
++T GH+ ++ +++ S + Q + G D +R+
Sbjct: 326 NVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRL 361
Score = 172 (65.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 40/140 (28%), Positives = 69/140 (49%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE-ETLSAGCQSGSIKIWNLA 88
VL T D +W + + +LSGH+ V +V+ + E + ++ G +I++W+L
Sbjct: 306 VLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLV 365
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSI 148
+ TL HK S+ ++ HP SGS D+ IK W I GH+ IN++
Sbjct: 366 AGKTRATLTNHKKSVRALVLHPRQYTFASGSPDN-IKQWKFPDGNFIQNLSGHNAIINTL 424
Query: 149 RFSPDGQWIASGGEDGVVRI 168
+ DG + SG ++G + +
Sbjct: 425 AVNSDGV-LVSGADNGTIHM 443
Score = 140 (54.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 43/160 (26%), Positives = 66/160 (41%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
+SGH V S+ G + G +IKIW+LA ++ +L GH S++ V
Sbjct: 204 ISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSP 263
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR---IGA 170
YL S D +K WDL I Y GH ++ + P + + D R I
Sbjct: 264 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRT 323
Query: 171 SFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLR 210
++ S H ++ V P T SH+T++R
Sbjct: 324 KANVHTLSGHTNTVATVKCQSAEPQVVTVG---SHDTTIR 360
Score = 51 (23.0 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 12/53 (22%), Positives = 20/53 (37%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLK 346
+ T S D T+ WDL +T + ++R L G + +K
Sbjct: 349 VVTVGSHDTTIRLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPDNIK 401
Score = 44 (20.5 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 9/56 (16%), Positives = 22/56 (39%)
Query: 295 TTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350
T +S + + W + + +++ I L + G + G D + ++ W
Sbjct: 391 TFASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLAVNSDGVLVSGADNGTIHMWDW 446
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 204 (76.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 47/166 (28%), Positives = 81/166 (48%)
Query: 9 EDFMAHGASVNCLALG-KKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG 67
+ F HGA V CL L ++G +GG DKK +W + C+ + H + V SV++
Sbjct: 231 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYY 290
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVDFHPYGDYLCSGSLDSFI 124
+ ++G + ++++L + + +S I +SVDF G L +G D I
Sbjct: 291 PSGDAFASGSDDATCRLYDLRADR-EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTI 349
Query: 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
+WD+ + + GH ++++R SPDG SG D +R+ A
Sbjct: 350 NVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 395
Score = 172 (65.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 38/150 (25%), Positives = 72/150 (48%)
Query: 27 SGQVLATGGDDKKVNLWAL--GKSNCIM----SLSGHSTPVESVQFGNGEETLSAGCQSG 80
SG +A GG D K +++ L K+ + S++ H+ + + F N + + G
Sbjct: 158 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG 217
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+ +W++ + ++ +GH + + +D P G+ SG D +WD+R C+ +
Sbjct: 218 TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF 277
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
H +NS+R+ P G ASG +D R+
Sbjct: 278 ETHESDVNSVRYYPSGDAFASGSDDATCRL 307
Score = 54 (24.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
D T+N WD+ K S VS + + + L S G G + L+V+
Sbjct: 346 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 394
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 204 (76.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 47/166 (28%), Positives = 81/166 (48%)
Query: 9 EDFMAHGASVNCLALG-KKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG 67
+ F HGA V CL L ++G +GG DKK +W + CI + H + + SV++
Sbjct: 232 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYY 291
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVDFHPYGDYLCSGSLDSFI 124
+ ++G + ++++L + + +S I +SVDF G L +G D I
Sbjct: 292 PSGDAFASGSDDATCRLYDLRADR-EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTI 350
Query: 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
+WD+ + + GH ++++R SPDG SG D +R+ A
Sbjct: 351 NVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 396
Score = 169 (64.5 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 40/151 (26%), Positives = 73/151 (48%)
Query: 27 SGQVLATGGDDKKVNLWAL--GKSNCIM----SLSGHSTPVESVQFGNGE-ETLSAGCQS 79
SG +A GG D K +++ L K+ + S++ H+ + + F N + + +
Sbjct: 158 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQQILTASGD 217
Query: 80 GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGCIYT 137
G+ +W++ + ++ +GH + + +D P G+ SG D +WD+R CI
Sbjct: 218 GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCIQA 277
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ H INS+R+ P G ASG +D R+
Sbjct: 278 FETHESDINSVRYYPSGDAFASGSDDATCRL 308
Score = 151 (58.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 40/145 (27%), Positives = 66/145 (45%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG---NGEETLSAGCQSGSIKIW 85
Q+L GD LW + + S GH V + G +S GC ++ +W
Sbjct: 210 QILTASGDGTCA-LWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAM-VW 267
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR--RKGCIYTYRGHSK 143
++ + H+S I SV ++P GD SGS D+ +L+DLR R+ IY+
Sbjct: 268 DMRSGQCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIF 327
Query: 144 SINSIRFSPDGQWIASGGEDGVVRI 168
+S+ FS G+ + +G D + +
Sbjct: 328 GASSVDFSLSGRLLFAGYNDYTINV 352
Score = 54 (24.1 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
D T+N WD+ K S VS + + + L S G G + L+V+
Sbjct: 347 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 395
>UNIPROTKB|F1P1L6 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 GO:GO:0014909 EMBL:AADN02016792
IPI:IPI00586339 Ensembl:ENSGALT00000018663 ArrayExpress:F1P1L6
Uniprot:F1P1L6
Length = 408
Score = 210 (79.0 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 1 MRAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
M A+ + F H ASV C++L K+ + TGG+D K +W L + SGH
Sbjct: 51 MEAQDDSEVTFSLHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECSGHKDS 110
Query: 61 VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL 120
V F + ++ G SG IK+W V T + + + +++HP L +G+
Sbjct: 111 VTCAGFSHDSVFVATGDMSGLIKVWR--VDTKEEAWSFEVGDLEWMEWHPQAHVLLAGTA 168
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN-TSI 179
D +W + C T++G + + PDG+ G EDG +RI + L TS+
Sbjct: 169 DGNSWMWKIPSGDC-KTFQGPACPATCGKILPDGKRAVVGYEDGTMRI---WDLKQGTSL 224
Query: 180 HVV 182
HV+
Sbjct: 225 HVL 227
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 46/180 (25%), Positives = 76/180 (42%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDD---KKVNLWALGKSNCIMSLSG----- 56
V K +D H + C+A + G ++ TG D K VN A GK C+ +
Sbjct: 226 VLKGQD--GHQDPLTCVA-SNQDGSLILTGSVDCHAKLVNS-ATGKVVCVFKMESAAPKA 281
Query: 57 --------HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDF 108
S VES+ F N + G G++ I++L+ +++ H+S I + +
Sbjct: 282 PASEGEEAESNSVESLGFCNVMPLAAVGYLDGTLAIYDLSTQSLRHKCQ-HESGIVQLLW 340
Query: 109 HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ + SLD ++LWD R I YRGHS I + D + + D ++
Sbjct: 341 EENSAVVYTCSLDGAVRLWDARSGKMISEYRGHSAEILDFAVNKDASIVVTTSGDHQAKV 400
Score = 38 (18.4 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 299 SADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
S D V WD ++S +S+ I L F+ + + T G
Sbjct: 351 SLDGAVRLWDARSGKMISEYRGHSAEI--LDFAVNKDASIVVTTSG 394
Score = 38 (18.4 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 28/92 (30%), Positives = 42/92 (45%)
Query: 545 LAEIEGLTEGSLTAKFLSSRNLREK-EDRIG------ESQPFRGRTLSVQDKIYFGFDFR 597
LA + G +G+L LS+++LR K + G E T S+ + +D R
Sbjct: 305 LAAV-GYLDGTLAIYDLSTQSLRHKCQHESGIVQLLWEENSAVVYTCSLDGAVRL-WDAR 362
Query: 598 SGQSLS-----STFFENFALNID--IVRLNSG 622
SG+ +S S +FA+N D IV SG
Sbjct: 363 SGKMISEYRGHSAEILDFAVNKDASIVVTTSG 394
>UNIPROTKB|Q3SZK1 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9913 "Bos taurus" [GO:0045766 "positive regulation of
angiogenesis" evidence=NAS] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=IMP] [GO:0014909 "smooth
muscle cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BC102815 IPI:IPI00693899
RefSeq:NP_001070463.1 UniGene:Bt.20293 ProteinModelPortal:Q3SZK1
STRING:Q3SZK1 PRIDE:Q3SZK1 Ensembl:ENSBTAT00000005126 GeneID:767919
KEGG:bta:767919 CTD:14 GeneTree:ENSGT00690000102167
HOGENOM:HOG000261676 HOVERGEN:HBG061307 InParanoid:Q3SZK1
OMA:VWSFEVG OrthoDB:EOG4D26PX NextBio:20918276 ArrayExpress:Q3SZK1
GO:GO:0001525 GO:GO:0045766 GO:GO:0010595 GO:GO:0014909
Uniprot:Q3SZK1
Length = 434
Score = 205 (77.2 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 53/183 (28%), Positives = 82/183 (44%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H ASV C++L K+ + TGG+D K +W L + +GH V F +
Sbjct: 87 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 146
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
++ G SG +K+W V T + + + +++HP L +G+ D +W +
Sbjct: 147 TLVATGDMSGLLKVWQ--VDTKEEVWSFEAGDLEWMEWHPRAPVLLAGTADGNTWMWKVP 204
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-----GASFH-LTNTSIHVVDL 184
C T++G + R PDG+ G EDG +RI G S H L T H L
Sbjct: 205 TGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNSIHVLKGTEGHQGPL 263
Query: 185 SLV 187
+ V
Sbjct: 264 TCV 266
>UNIPROTKB|F1ND84 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 OMA:VWSFEVG GO:GO:0014909
EMBL:AADN02016792 IPI:IPI00821947 Ensembl:ENSGALT00000038174
ArrayExpress:F1ND84 Uniprot:F1ND84
Length = 411
Score = 210 (79.0 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 1 MRAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
M A+ + F H ASV C++L K+ + TGG+D K +W L + SGH
Sbjct: 54 MEAQDDSEVTFSLHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECSGHKDS 113
Query: 61 VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL 120
V F + ++ G SG IK+W V T + + + +++HP L +G+
Sbjct: 114 VTCAGFSHDSVFVATGDMSGLIKVWR--VDTKEEAWSFEVGDLEWMEWHPQAHVLLAGTA 171
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN-TSI 179
D +W + C T++G + + PDG+ G EDG +RI + L TS+
Sbjct: 172 DGNSWMWKIPSGDC-KTFQGPACPATCGKILPDGKRAVVGYEDGTMRI---WDLKQGTSL 227
Query: 180 HVV 182
HV+
Sbjct: 228 HVL 230
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 46/180 (25%), Positives = 76/180 (42%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDD---KKVNLWALGKSNCIMSLSG----- 56
V K +D H + C+A + G ++ TG D K VN A GK C+ +
Sbjct: 229 VLKGQD--GHQDPLTCVA-SNQDGSLILTGSVDCHAKLVNS-ATGKVVCVFKMESAAPKA 284
Query: 57 --------HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDF 108
S VES+ F N + G G++ I++L+ +++ H+S I + +
Sbjct: 285 PASEGEEAESNSVESLGFCNVMPLAAVGYLDGTLAIYDLSTQSLRHKCQ-HESGIVQLLW 343
Query: 109 HPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ + SLD ++LWD R I YRGHS I + D + + D ++
Sbjct: 344 EENSAVVYTCSLDGAVRLWDARSGKMISEYRGHSAEILDFAVNKDASIVVTTSGDHQAKV 403
Score = 38 (18.4 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 299 SADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
S D V WD ++S +S+ I L F+ + + T G
Sbjct: 354 SLDGAVRLWDARSGKMISEYRGHSAEI--LDFAVNKDASIVVTTSG 397
Score = 38 (18.4 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 28/92 (30%), Positives = 42/92 (45%)
Query: 545 LAEIEGLTEGSLTAKFLSSRNLREK-EDRIG------ESQPFRGRTLSVQDKIYFGFDFR 597
LA + G +G+L LS+++LR K + G E T S+ + +D R
Sbjct: 308 LAAV-GYLDGTLAIYDLSTQSLRHKCQHESGIVQLLWEENSAVVYTCSLDGAVRL-WDAR 365
Query: 598 SGQSLS-----STFFENFALNID--IVRLNSG 622
SG+ +S S +FA+N D IV SG
Sbjct: 366 SGKMISEYRGHSAEILDFAVNKDASIVVTTSG 397
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 190 (71.9 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 47/159 (29%), Positives = 78/159 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H SV CL + +V+ +G D V +W + CI +L H V ++F NG +
Sbjct: 261 HTGSVLCL---QYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANG---I 314
Query: 74 SAGCQSG-SIKIWNLAVP---TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
C SI +W++ P T++R L GH++++ VDF Y+ S S D IK+W +
Sbjct: 315 MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDR--YIVSASGDRTIKVWSM 372
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH + I +++ G+ + SG D +R+
Sbjct: 373 DTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRL 409
Score = 163 (62.4 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 41/142 (28%), Positives = 69/142 (48%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMS---LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
++ T D+ + +W + I L GH V V F + ++G ++ IK+W+
Sbjct: 314 IMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRT--IKVWS 371
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ RTL GH+ I + + G + SGS D+ I+LWD+ C+ GH + +
Sbjct: 372 MDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVR 429
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
IRF D + I SG DG +++
Sbjct: 430 CIRF--DEKRIVSGAYDGKIKV 449
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 36/164 (21%), Positives = 79/164 (48%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H A+VN + + +++ GD + + +W++ + +L+GH + +Q+ G
Sbjct: 342 VGHRAAVNVVDFDDR--YIVSASGD-RTIKVWSMDTLEFVRTLAGHRRGIACLQY-RGRL 397
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
+S G +I++W++ R L GH+ + + F + SG+ D IK+WDL+
Sbjct: 398 VVS-GSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDE--KRIVSGAYDGKIKVWDLQA 454
Query: 132 ---------KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
+ C+ + H+ + ++F D Q ++S +D ++
Sbjct: 455 ALDPRALSSEICLCSLVQHTGRVFRLQFD-DFQIVSSSHDDTIL 497
Score = 120 (47.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 31/113 (27%), Positives = 57/113 (50%)
Query: 41 NLWALG--KSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG 98
N W G K I S +S V +Q+ ++ + +G + +IKIW+ + R L+G
Sbjct: 203 NNWKRGNYKMTRINCQSENSKGVYCLQYD--DDKIVSGLRDNTIKIWDRKDYSCSRILSG 260
Query: 99 HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151
H S+ + + + SGS D+ +++WD+ CI T H +++ +RF+
Sbjct: 261 HTGSVLCLQYD--NRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA 311
Score = 116 (45.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 32/141 (22%), Positives = 64/141 (45%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ +G D + +W +C LSGH+ V +Q+ N + +G ++++W++
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDN--RVIISGSSDATVRVWDVETG 292
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR---GHSKSINS 147
+TL H ++ + F + + S D I +WD+ I R GH ++N
Sbjct: 293 ECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNV 350
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ F D ++I S D +++
Sbjct: 351 VDF--DDRYIVSASGDRTIKV 369
Score = 68 (29.0 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 29/120 (24%), Positives = 51/120 (42%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S+D T+ WD+ + E + +R + F E + ++ G +G K+ W+
Sbjct: 397 LVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDE--KRIVSGAYDG-KIKVWDLQ 453
Query: 354 RQYDAQPMGWGKVQDLAVTGTQLWFR------RVGTWSHQDSG--FSTLDSYSAGSPVST 405
D + + V T FR ++ + SH D+ + LD+ +G P ST
Sbjct: 454 AALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWDFLDAPPSGLPSST 513
Score = 52 (23.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
S+S DRT+ W ++ V T + I L + G ++ G ++
Sbjct: 360 SASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSD 404
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 190 (71.9 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 47/159 (29%), Positives = 78/159 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H SV CL + +V+ +G D V +W + CI +L H V ++F NG +
Sbjct: 261 HTGSVLCL---QYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANG---I 314
Query: 74 SAGCQSG-SIKIWNLAVP---TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
C SI +W++ P T++R L GH++++ VDF Y+ S S D IK+W +
Sbjct: 315 MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDR--YIVSASGDRTIKVWSM 372
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH + I +++ G+ + SG D +R+
Sbjct: 373 DTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRL 409
Score = 163 (62.4 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 41/142 (28%), Positives = 69/142 (48%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMS---LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
++ T D+ + +W + I L GH V V F + ++G ++ IK+W+
Sbjct: 314 IMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRT--IKVWS 371
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ RTL GH+ I + + G + SGS D+ I+LWD+ C+ GH + +
Sbjct: 372 MDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVR 429
Query: 147 SIRFSPDGQWIASGGEDGVVRI 168
IRF D + I SG DG +++
Sbjct: 430 CIRF--DEKRIVSGAYDGKIKV 449
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 36/164 (21%), Positives = 79/164 (48%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H A+VN + + +++ GD + + +W++ + +L+GH + +Q+ G
Sbjct: 342 VGHRAAVNVVDFDDR--YIVSASGD-RTIKVWSMDTLEFVRTLAGHRRGIACLQY-RGRL 397
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
+S G +I++W++ R L GH+ + + F + SG+ D IK+WDL+
Sbjct: 398 VVS-GSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDE--KRIVSGAYDGKIKVWDLQA 454
Query: 132 ---------KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
+ C+ + H+ + ++F D Q ++S +D ++
Sbjct: 455 ALDPRALSSEICLCSLVQHTGRVFRLQFD-DFQIVSSSHDDTIL 497
Score = 120 (47.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 31/113 (27%), Positives = 57/113 (50%)
Query: 41 NLWALG--KSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNG 98
N W G K I S +S V +Q+ ++ + +G + +IKIW+ + R L+G
Sbjct: 203 NNWKRGNYKMTRINCQSENSKGVYCLQYD--DDKIVSGLRDNTIKIWDRKDYSCSRILSG 260
Query: 99 HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151
H S+ + + + SGS D+ +++WD+ CI T H +++ +RF+
Sbjct: 261 HTGSVLCLQYD--NRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA 311
Score = 116 (45.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 32/141 (22%), Positives = 64/141 (45%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ +G D + +W +C LSGH+ V +Q+ N + +G ++++W++
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDN--RVIISGSSDATVRVWDVETG 292
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR---GHSKSINS 147
+TL H ++ + F + + S D I +WD+ I R GH ++N
Sbjct: 293 ECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNV 350
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
+ F D ++I S D +++
Sbjct: 351 VDF--DDRYIVSASGDRTIKV 369
Score = 68 (29.0 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 29/120 (24%), Positives = 51/120 (42%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S+D T+ WD+ + E + +R + F E + ++ G +G K+ W+
Sbjct: 397 LVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDE--KRIVSGAYDG-KIKVWDLQ 453
Query: 354 RQYDAQPMGWGKVQDLAVTGTQLWFR------RVGTWSHQDSG--FSTLDSYSAGSPVST 405
D + + V T FR ++ + SH D+ + LD+ +G P ST
Sbjct: 454 AALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWDFLDAPPSGLPSST 513
Score = 52 (23.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
S+S DRT+ W ++ V T + I L + G ++ G ++
Sbjct: 360 SASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSD 404
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 200 (75.5 bits), Expect = 4.3e-13, Sum P(4) = 4.3e-13
Identities = 43/143 (30%), Positives = 72/143 (50%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
GQ + TG DD K+ +W + CI++ + H++ V + F L + GS++ W+L
Sbjct: 351 GQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDL 410
Query: 88 AVPTVQRTLNG-HKSSITSVDFHPYGDYLCSGSLDSF-IKLWDLRRKGCIYTYRGHSKSI 145
RT + + + P G+ +C+GS DSF I +W ++ + T GH +
Sbjct: 411 IRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPV 470
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
+S+ F+ G +ASG D VRI
Sbjct: 471 SSLSFNSSGSLLASGSWDKTVRI 493
Score = 153 (58.9 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 42/156 (26%), Positives = 70/156 (44%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHS-TPVESVQFGNG 69
F H ++V+ L K+ G VL + D V W L + + + S +
Sbjct: 377 FTQHTSAVSGLCFSKR-GNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPS 435
Query: 70 EETLSAGCQ-SGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
E + AG Q S I +W++ + TL GH+ ++S+ F+ G L SGS D +++WD
Sbjct: 436 GEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWD 495
Query: 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG 164
+ + I + S+ F PDG+ + DG
Sbjct: 496 IFSRSGIVEPLPIPSDVLSLAFHPDGKEVCVASLDG 531
Score = 146 (56.5 bits), Expect = 2.6e-06, Sum P(4) = 2.6e-06
Identities = 58/235 (24%), Positives = 105/235 (44%)
Query: 19 NCLALGKKSGQVLATGGDDK-KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
+C+A+ SG+++ G D ++ +W++ + +L+GH PV S+ F + L++G
Sbjct: 428 SCIAVDP-SGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGS 486
Query: 78 QSGSIKIWNLAVPT-VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIY 136
+++IW++ + + L S + S+ FHP G +C SLD + W+++
Sbjct: 487 WDKTVRIWDIFSRSGIVEPLP-IPSDVLSLAFHPDGKEVCVASLDGQLTFWNVQE----- 540
Query: 137 TYRGHSKSINSIRFSPDGQWIASGG---EDGVVRIGASFHLTNTSI-HVVDLSLVHPLGT 192
K + I DG+ SGG +D +S + T TSI + D S V GT
Sbjct: 541 -----GKQTSLI----DGRKDLSGGRRFDDARTAENSSLNKTFTSICYSADGSCVLSAGT 591
Query: 193 PPPQYTSSVPFSHNTSLRK-SFTKGRP-GGTKAKIDVTRIEENAESE--DQAGEE 243
+Y ++K +K G + ++ ++ E E D GEE
Sbjct: 592 S--KYVCLYDIITGVLIKKFQLSKNESLQGVQEMLNSRKMTEAGSIELIDTQGEE 644
Score = 144 (55.7 bits), Expect = 3.6e-07, Sum P(4) = 3.6e-07
Identities = 33/150 (22%), Positives = 70/150 (46%)
Query: 16 ASVNCLALGKKSGQVLATGGDDK-KVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS 74
++++ L + +G +A G ++ +W + ++ H + ++Q+ + + +
Sbjct: 297 SNIDTLTVNS-TGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRII 355
Query: 75 AGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC 134
G G IK+W++ T H S+++ + F G+ L S SLD ++ WDL R
Sbjct: 356 TGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRN 415
Query: 135 IYTYRGHSK-SINSIRFSPDGQWIASGGED 163
T+ S+ + I P G+ + +G +D
Sbjct: 416 FRTFTAPSRVQFSCIAVDPSGEIVCAGSQD 445
Score = 128 (50.1 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 32/162 (19%), Positives = 69/162 (42%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K + + + C A S +L G ++ L + LS + ++++
Sbjct: 246 KERHYFNQNSKLRCAAFHPTSN-LLVVGFSSGLFGIYELPSFTMLYQLSITQSNIDTLTV 304
Query: 67 GNGEETLSAGCQS-GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
+ + ++ G G + +W + H +++++ + G + +G+ D IK
Sbjct: 305 NSTGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIK 364
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
+WD+ CI T+ H+ +++ + FS G + S DG VR
Sbjct: 365 VWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVR 406
Score = 111 (44.1 bits), Expect = 5.0e-05, Sum P(4) = 5.0e-05
Identities = 29/146 (19%), Positives = 72/146 (49%)
Query: 26 KSGQVLATGGDDKKV--NLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIK 83
++G+V+ ++ K ++W + + + ++ + F L G SG
Sbjct: 224 QAGEVIDEEAEENKTRTHIWLIKERHYF----NQNSKLRCAAFHPTSNLLVVGFSSGLFG 279
Query: 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD-SFIKLWDLRRKGCIYTYRGHS 142
I+ L T+ L+ +S+I ++ + GD++ GS + +W+ + + + + H
Sbjct: 280 IYELPSFTMLYQLSITQSNIDTLTVNSTGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHY 339
Query: 143 KSINSIRFSPDGQWIASGGEDGVVRI 168
+++++++S DGQ I +G +DG +++
Sbjct: 340 DALSTLQYSSDGQRIITGADDGKIKV 365
Score = 64 (27.6 bits), Expect = 5.0e-05, Sum P(4) = 5.0e-05
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 301 DRTVNFWDLEK-FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPAR 354
D + WD+ F +V+ T+ ++S + L FS+ G L +G V W+ R
Sbjct: 360 DGKIKVWDMNSGFCIVTFTQ-HTSAVSGLCFSKRGNVLFSSSLDG-SVRAWDLIR 412
Score = 60 (26.2 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 22/88 (25%), Positives = 34/88 (38%)
Query: 268 SGTCVPVSVSRTSLSILPQSPMLCFI----LTTSSSADRTVNFWDLEKFSLVST-TEKNS 322
SG C+ TS LCF + SSS D +V WDL ++ T T +
Sbjct: 370 SGFCIVTFTQHTSAV-----SGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSR 424
Query: 323 STIRRLTFSEGGECLLGGDTEGLKVYGW 350
+ GE + G + +++ W
Sbjct: 425 VQFSCIAVDPSGEIVCAGSQDSFEIFMW 452
Score = 51 (23.0 bits), Expect = 4.3e-13, Sum P(4) = 4.3e-13
Identities = 36/158 (22%), Positives = 65/158 (41%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S D+TV WD+ S + S + L F G+ + +G + W
Sbjct: 481 LLASGSWDKTVRIWDIFSRSGIVEPLPIPSDVLSLAFHPDGKEVCVASLDGQLTF-WNVQ 539
Query: 354 RQYDAQPMGWGKVQDLAVTGTQLWFRRVGTWSHQDSGFSTLDSYSA-GSPVSTMGRERDQ 412
+ G+ +DL+ G + R S + F+++ YSA GS V + G +
Sbjct: 540 EGKQTSLID-GR-KDLS-GGRRFDDARTAENSSLNKTFTSI-CYSADGSCVLSAGTSK-Y 594
Query: 413 IVPMNLSAPIGLDMEQFLPKSYQTHQGKSSMSESELMS 450
+ ++ G+ +++F ++ QG M S M+
Sbjct: 595 VCLYDIIT--GVLIKKFQLSKNESLQGVQEMLNSRKMT 630
Score = 50 (22.7 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
Identities = 13/68 (19%), Positives = 27/68 (39%)
Query: 273 PVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE 332
P V + +++ P ++C S + W ++ L+ T + + L+F+
Sbjct: 422 PSRVQFSCIAVDPSGEIVC----AGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNS 477
Query: 333 GGECLLGG 340
G L G
Sbjct: 478 SGSLLASG 485
Score = 49 (22.3 bits), Expect = 4.3e-13, Sum P(4) = 4.3e-13
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 479 NKNMEAGIDTALSM-NDGTVMIDLFKSMLGQGYKKCVKVYNALMPVKSV 526
N +M+ T L+M +G +I L ++ YK KVY ++ P+ V
Sbjct: 709 NLDMDITPSTTLTMCAEGEFLISLVMALRLNEYKVVQKVYESI-PITDV 756
Score = 46 (21.3 bits), Expect = 4.3e-13, Sum P(4) = 4.3e-13
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 671 TTSPHPLPRKPLERDVDELVYISPFGQEKPSVDFEVPTKESEI--YPTYVRK 720
T H + P+ + + Y+S F E P ++F + +S + + Y+R+
Sbjct: 754 TDVEHVVQELPVSYLANFMGYLSSFAAETPHIEFHLRWMKSVLTYHGEYLRR 805
Score = 40 (19.1 bits), Expect = 5.3e-12, Sum P(4) = 5.3e-12
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 330 FSEGGECLLGGDTEGLKVY 348
FS G TEGL +Y
Sbjct: 679 FSPSGGAFAAATTEGLMIY 697
>UNIPROTKB|O14775 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0007165
"signal transduction" evidence=NAS] [GO:0005834 "heterotrimeric
G-protein complex" evidence=NAS] [GO:0006184 "GTP catabolic
process" evidence=NAS] Reactome:REACT_13685 Reactome:REACT_604
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005634
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
Pathway_Interaction_DB:txa2pathway
Pathway_Interaction_DB:cone_pathway
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
GO:GO:0005834 HOGENOM:HOG000176356 HOVERGEN:HBG000188
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE
EMBL:AF017656 EMBL:AL117471 EMBL:AF501885 EMBL:AF300650
EMBL:BC013997 IPI:IPI00151607 IPI:IPI00745232 IPI:IPI00967497
PIR:T17256 RefSeq:NP_006569.1 RefSeq:NP_057278.2 UniGene:Hs.155090
ProteinModelPortal:O14775 SMR:O14775 IntAct:O14775
MINT:MINT-1399610 STRING:O14775 PhosphoSite:O14775 PaxDb:O14775
PRIDE:O14775 DNASU:10681 Ensembl:ENST00000261837
Ensembl:ENST00000358784 Ensembl:ENST00000396335 GeneID:10681
KEGG:hsa:10681 UCSC:uc002abr.1 UCSC:uc002abs.1 CTD:10681
GeneCards:GC15M052413 HGNC:HGNC:4401 HPA:CAB032353 HPA:HPA041942
MIM:604447 neXtProt:NX_O14775 PharmGKB:PA28780 InParanoid:O14775
OrthoDB:EOG4XWFXZ PhylomeDB:O14775 ChiTaRS:GNB5 GenomeRNAi:10681
NextBio:40605 ArrayExpress:O14775 Bgee:O14775 CleanEx:HS_GNB5
Genevestigator:O14775 GermOnline:ENSG00000069966 Uniprot:O14775
Length = 395
Score = 203 (76.5 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 46/166 (27%), Positives = 81/166 (48%)
Query: 9 EDFMAHGASVNCLALG-KKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG 67
+ F HGA V CL L ++G +GG DKK +W + C+ + H + + SV++
Sbjct: 231 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYY 290
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVDFHPYGDYLCSGSLDSFI 124
+ ++G + ++++L + + +S I +SVDF G L +G D I
Sbjct: 291 PSGDAFASGSDDATCRLYDLRADR-EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTI 349
Query: 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
+WD+ + + GH ++++R SPDG SG D +R+ A
Sbjct: 350 NVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 395
Score = 173 (66.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/150 (26%), Positives = 72/150 (48%)
Query: 27 SGQVLATGGDDKKVNLWAL--GKSNCIM----SLSGHSTPVESVQFGNGEETLSAGCQSG 80
SG +A GG D K +++ L K+ + S++ H+ + + F N + + G
Sbjct: 158 SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG 217
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+ +W++ + ++ +GH + + +D P G+ SG D +WD+R C+ +
Sbjct: 218 TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF 277
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
H INS+R+ P G ASG +D R+
Sbjct: 278 ETHESDINSVRYYPSGDAFASGSDDATCRL 307
Score = 54 (24.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
D T+N WD+ K S VS + + + L S G G + L+V+
Sbjct: 346 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 394
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 207 (77.9 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 56/167 (33%), Positives = 79/167 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V CL L + +LA+G D + LW L + L GHS+ V +QF + L
Sbjct: 272 HSDGVMCLQLVRN---ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCK--L 326
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+G +I+IWN L+GH S+ + F L SGS D +KLW G
Sbjct: 327 ISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFD--STLLVSGSADCTVKLWHFSG-G 383
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIH 180
T RGH+ +NS+R D + SG +D ++I S TNT +H
Sbjct: 384 KRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIW-SLE-TNTCLH 428
Score = 192 (72.6 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 51/164 (31%), Positives = 76/164 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H SV CL +L +G D V LW I +L GH+ PV SV+ +
Sbjct: 352 HTDSVLCLTF---DSTLLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDRGLV 407
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+G +IKIW+L T T + H + S+ + CS LD IK WD+ +K
Sbjct: 408 LSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSCS--LDGTIKQWDIEKKK 465
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNT 177
C++T GH + + I + D + SG DGVV++ + +T
Sbjct: 466 CVHTLFGHIEGVWEI--AADHLRLISGAHDGVVKVWEACECVHT 507
Score = 176 (67.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 44/155 (28%), Positives = 77/155 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H VN + + + G VL+ G DD + +W+L + C+ + S H PV+S+ + L
Sbjct: 391 HTGPVNSVRIIRDRGLVLS-GSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSR--L 447
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYL--CSGSLDSFIKLWDLRR 131
+ G+IK W++ TL GH + + D+L SG+ D +K+W+
Sbjct: 448 FSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIA----ADHLRLISGAHDGVVKVWEACE 503
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
C++T + HS+ + S+ D + + SG EDG +
Sbjct: 504 --CVHTLKNHSEPVTSVALG-DCE-VVSGSEDGKI 534
Score = 165 (63.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 44/154 (28%), Positives = 72/154 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + V CL + L +G DK + +W S CI L GH+ V + F + L
Sbjct: 312 HSSGVTCLQFDQCK---LISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDS--TLL 366
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+G ++K+W+ + + TL GH + SV + SGS DS IK+W L
Sbjct: 367 VSGSADCTVKLWHFSGGK-RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNT 425
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
C++T+ H + S+ + D + + S DG ++
Sbjct: 426 CLHTFSAHIGPVQSLALA-DSR-LFSCSLDGTIK 457
Score = 164 (62.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 41/126 (32%), Positives = 62/126 (49%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
W G+ ++ LSGHS V +Q L++G +I++WNLA L GH S
Sbjct: 259 WRHGRCRQVV-LSGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSG 315
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
+T + F L SGS+D I++W+ R CI GH+ S+ + F D + SG
Sbjct: 316 VTCLQFDQCK--LISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTF--DSTLLVSGSA 371
Query: 163 DGVVRI 168
D V++
Sbjct: 372 DCTVKL 377
Score = 48 (22.0 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 297 SSSADRTVNFWDLEKFSLVST 317
S S D T+ WD+EK V T
Sbjct: 449 SCSLDGTIKQWDIEKKKCVHT 469
Score = 48 (22.0 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGEC-LLGGDTEGLKVYGW 350
S + D V W E V T + +S + + G+C ++ G +G K+Y W
Sbjct: 489 SGAHDGVVKVW--EACECVHTLKNHSEPVTSVAL---GDCEVVSGSEDG-KIYLW 537
>UNIPROTKB|Q13685 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0014909 "smooth muscle cell
migration" evidence=IEP] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=ISS] [GO:0009986 "cell
surface" evidence=IDA] [GO:0001525 "angiogenesis" evidence=NAS]
[GO:0008201 "heparin binding" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005737
GO:GO:0009986 GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0008201
CTD:14 HOGENOM:HOG000261676 HOVERGEN:HBG061307 OrthoDB:EOG4D26PX
GO:GO:0001525 GO:GO:0010595 GO:GO:0014909 EMBL:M95627 EMBL:CR456755
EMBL:BC008809 EMBL:BC020244 EMBL:BC039866 IPI:IPI00014481
PIR:I39383 RefSeq:NP_001078.2 UniGene:Hs.83347
ProteinModelPortal:Q13685 SMR:Q13685 IntAct:Q13685
MINT:MINT-1418005 STRING:Q13685 PhosphoSite:Q13685 DMDM:62906874
PaxDb:Q13685 PRIDE:Q13685 Ensembl:ENST00000248450 GeneID:14
KEGG:hsa:14 UCSC:uc002vhk.3 GeneCards:GC02M219092 HGNC:HGNC:18
HPA:CAB017717 MIM:603488 neXtProt:NX_Q13685 PharmGKB:PA24365
InParanoid:Q13685 ChiTaRS:AAMP GenomeRNAi:14 NextBio:31
ArrayExpress:Q13685 Bgee:Q13685 CleanEx:HS_AAMP
Genevestigator:Q13685 GermOnline:ENSG00000127837 Uniprot:Q13685
Length = 434
Score = 204 (76.9 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 52/183 (28%), Positives = 82/183 (44%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H ASV C++L K+ + TGG+D K +W L + +GH V F +
Sbjct: 87 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 146
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
++ G SG +K+W V T + + + +++HP L +G+ D +W +
Sbjct: 147 TLVATGDMSGLLKVWQ--VDTKEEVWSFEAGDLEWMEWHPRAPVLLAGTADGNTWMWKVP 204
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-----GASFH-LTNTSIHVVDL 184
C T++G + R PDG+ G EDG +RI G+ H L T H L
Sbjct: 205 NGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPL 263
Query: 185 SLV 187
+ V
Sbjct: 264 TCV 266
>UNIPROTKB|Q5RCG7 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9601 "Pongo abelii" [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0014909 "smooth muscle cell migration"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:14 GeneTree:ENSGT00690000102167
HOVERGEN:HBG061307 OrthoDB:EOG4D26PX GO:GO:0001525 GO:GO:0010595
GO:GO:0014909 EMBL:CR858303 EMBL:CR859206 RefSeq:NP_001125288.1
UniGene:Pab.19266 ProteinModelPortal:Q5RCG7
Ensembl:ENSPPYT00000015307 GeneID:100172186 KEGG:pon:100172186
InParanoid:Q5RCG7 Uniprot:Q5RCG7
Length = 434
Score = 204 (76.9 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 52/183 (28%), Positives = 82/183 (44%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H ASV C++L K+ + TGG+D K +W L + +GH V F +
Sbjct: 87 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 146
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
++ G SG +K+W V T + + + +++HP L +G+ D +W +
Sbjct: 147 TLVATGDMSGLLKVWQ--VDTKEEVWSFEAGDLEWMEWHPRAPVLLAGTADGNTWMWKVP 204
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-----GASFH-LTNTSIHVVDL 184
C T++G + R PDG+ G EDG +RI G+ H L T H L
Sbjct: 205 NGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPL 263
Query: 185 SLV 187
+ V
Sbjct: 264 TCV 266
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 208 (78.3 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 45/138 (32%), Positives = 72/138 (52%)
Query: 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW-NLAVPTVQRT 95
DK LWA + + GH + V+ VQF ++ G ++++W N+ +V R
Sbjct: 513 DKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSV-RL 571
Query: 96 LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ 155
+ GHK S++S+ F G YL SGS+D I +WDL + T H+ ++ +I FS DG
Sbjct: 572 MTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGT 631
Query: 156 WIASGGEDGVVRIGASFH 173
+A+ G D + + FH
Sbjct: 632 VLAAAGLDNNLTLW-DFH 648
Score = 199 (75.1 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 50/175 (28%), Positives = 83/175 (47%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E M H V A + +L+ +D + LW+L +C+++ GH PV V+
Sbjct: 441 EVTRSLMGHTGPVYRCAFAPEMNLLLSCS-EDSTIRLWSLLTWSCVVTYRGHVYPVWDVR 499
Query: 66 FG-NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFI 124
F +G +S + ++W R GH S + V FHP +Y+ +GS D +
Sbjct: 500 FAPHGYYFVSCSYDK-TARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTV 558
Query: 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSI 179
+LWD + GH S++S+ FS G+++ASG D + I + L+N S+
Sbjct: 559 RLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIII---WDLSNGSL 610
Score = 163 (62.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F+ H + V+C+ S V ATG D+ V LW + ++GH V S+ F
Sbjct: 530 FVGHLSDVDCVQFHPNSNYV-ATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACG 588
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L++G +I IW+L+ ++ TL H S++T++ F G L + LD+ + LWD
Sbjct: 589 RYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFH 648
Query: 131 R 131
+
Sbjct: 649 K 649
Score = 140 (54.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 45/156 (28%), Positives = 66/156 (42%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
V C + S +LA G D V +W+L TP + + +
Sbjct: 380 VTCAEISDDS-TMLACGFGDSSVRIWSL-------------TPAKLRTLKDADSLRELDK 425
Query: 78 QSGSIKIWNLAVPT--VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI 135
+S I + L + V R+L GH + F P + L S S DS I+LW L C+
Sbjct: 426 ESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCV 485
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGAS 171
TYRGH + +RF+P G + S D R+ A+
Sbjct: 486 VTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWAT 521
Score = 87 (35.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 266 NRSGTCVPVSVS-RTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSST 324
N +G V + + S+S L S C S S D + WDL SLV+T +++ST
Sbjct: 563 NMTGQSVRLMTGHKGSVSSLAFSA--CGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTST 620
Query: 325 IRRLTFSEGGECL 337
+ +TFS G L
Sbjct: 621 VTTITFSRDGTVL 633
Score = 58 (25.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
+ S+DRTV WD V + ++ L FS G L G +
Sbjct: 551 TGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVD 597
>UNIPROTKB|Q7YR70 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9615 "Canis lupus familiaris" [GO:0014909 "smooth muscle
cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 CTD:14
GeneTree:ENSGT00690000102167 HOGENOM:HOG000261676
HOVERGEN:HBG061307 OMA:VWSFEVG OrthoDB:EOG4D26PX GO:GO:0001525
GO:GO:0010595 GO:GO:0014909 EMBL:AY197355 RefSeq:NP_001013872.1
UniGene:Cfa.8616 ProteinModelPortal:Q7YR70 STRING:Q7YR70
Ensembl:ENSCAFT00000023220 GeneID:478908 KEGG:cfa:478908
InParanoid:Q7YR70 NextBio:20854176 Uniprot:Q7YR70
Length = 435
Score = 204 (76.9 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 52/183 (28%), Positives = 82/183 (44%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H ASV C++L K+ + TGG+D K +W L + +GH V F +
Sbjct: 88 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 147
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
++ G SG +K+W V T + + + +++HP L +G+ D +W +
Sbjct: 148 TLVATGDMSGLLKVWQ--VDTKEEVWSFEAGDLEWMEWHPRAPVLLAGTADGNTWMWKVP 205
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-----GASFH-LTNTSIHVVDL 184
C T++G + R PDG+ G EDG +RI G+ H L T H L
Sbjct: 206 NGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPL 264
Query: 185 SLV 187
+ V
Sbjct: 265 TCV 267
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 207 (77.9 bits), Expect = 4.9e-13, Sum P(3) = 4.9e-13
Identities = 43/155 (27%), Positives = 76/155 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C+A+ + Q TG D+ + +W L +SL+GH + V V L
Sbjct: 205 HLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYL 263
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + +K W+L V R +GH S++ +D HP D L + S DS ++WD+R K
Sbjct: 264 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKA 323
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
++T GH+ ++ +++ + +G D +R+
Sbjct: 324 SVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRL 358
Score = 174 (66.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 41/139 (29%), Positives = 66/139 (47%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
VL T D +W + + +LSGH+ V +V+ E + G +I++W+L
Sbjct: 304 VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVA 363
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+ TL HK S+ +V HP SGS D+ IK W I GH+ IN++
Sbjct: 364 GKTRVTLTNHKKSVRAVILHPRHYTFASGSPDN-IKQWKFPDGNFIQNLSGHNAIINTLT 422
Query: 150 FSPDGQWIASGGEDGVVRI 168
+ DG + SG ++G + +
Sbjct: 423 VNSDGV-LVSGADNGTMHL 440
Score = 153 (58.9 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 38/152 (25%), Positives = 69/152 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++V + + +S + + G +DK+V W L + I GH + V + + L
Sbjct: 247 HISTVRGVIVSARSPYLFSCG-EDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVL 305
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + +IW++ TL+GH +++ +V + +GS D+ I+LWDL
Sbjct: 306 VTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGK 365
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
T H KS+ ++ P ASG D +
Sbjct: 366 TRVTLTNHKKSVRAVILHPRHYTFASGSPDNI 397
Score = 139 (54.0 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 43/159 (27%), Positives = 66/159 (41%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
+SGH V + G + G +IKIW+LA ++ +L GH S++ V
Sbjct: 202 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSP 261
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFH 173
YL S D +K WDL I Y GH ++ + P + + D RI
Sbjct: 262 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV-- 319
Query: 174 LTNTSIHVVDLSLVHPLGTPPPQYTSS--VPFSHNTSLR 210
T S+H + + + T Q V SH+T++R
Sbjct: 320 RTKASVHTLS-GHTNAVATVKCQAAEPQVVTGSHDTTIR 357
Score = 49 (22.3 bits), Expect = 4.9e-13, Sum P(3) = 4.9e-13
Identities = 10/56 (17%), Positives = 23/56 (41%)
Query: 295 TTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350
T +S + + W + + +++ I LT + G + G D + ++ W
Sbjct: 388 TFASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDW 443
Score = 42 (19.8 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 297 SSSADRTVNFWDLE--KFSLVSTTEKNS--STI---RRLTFSEG 333
+ S D T+ WDL K + T K S + I R TF+ G
Sbjct: 349 TGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFASG 392
Score = 37 (18.1 bits), Expect = 4.9e-13, Sum P(3) = 4.9e-13
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 668 DMATTSPHPLPRKP 681
D AT HP+ KP
Sbjct: 495 DTATEETHPISWKP 508
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 209 (78.6 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 42/156 (26%), Positives = 75/156 (48%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
AH +N +A+ + V TG +D+ ++W L +++L GH + SV+F ++
Sbjct: 497 AHDKDINSVAVARNDSLV-CTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQC 555
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
+ ++KIW ++ + +T GH SS+ F G S D +KLW++
Sbjct: 556 VMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTS 615
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
CI TY H + ++ + IA+GG D V+ +
Sbjct: 616 ECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINL 651
Score = 185 (70.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 58/220 (26%), Positives = 98/220 (44%)
Query: 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ-FGNGEETLSA 75
++ LAL ++L + G +++ +W L CI S GH PV + +G +A
Sbjct: 62 TLTALALSPDD-KLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATA 120
Query: 76 GCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSLDSFIKLWDLRRKG 133
G + +W++ GHK ++S+ FHP + L SGS D+ +++WDL K
Sbjct: 121 GADR-KVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKN 179
Query: 134 ----CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHP 189
C+ H ++ SI S DG + S G D VV + H + V ++
Sbjct: 180 TEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW-DLHDYSCKATVATYEVLEA 238
Query: 190 LGTPPPQYTSSVPF-SHNTSLRKSFTKGRPGGTKAKIDVT 228
+ T +S PF S SL + +K + ++A +T
Sbjct: 239 VTT----VSSGTPFASFVASLDQKKSKKKESDSQATYFIT 274
Score = 175 (66.7 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 43/165 (26%), Positives = 72/165 (43%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALG----KSNCIMSL------SGHSTPVES 63
H + +A KKS +G D+ + +W+L S ++L + H + S
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINS 504
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
V + + G + + IW L TL GHK I SV+F + + S D
Sbjct: 505 VAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKT 564
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+K+W + C+ T+ GH+ S+ F DG S G DG++++
Sbjct: 565 VKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKL 609
Score = 147 (56.8 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 64/330 (19%), Positives = 140/330 (42%)
Query: 54 LSGHSTPVESVQF-GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVD--FHP 110
L G++ + ++F G+ E+ L+ ++++++A + L GHK + S+D
Sbjct: 354 LVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSS 413
Query: 111 YGDYLC-SGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG-QWIASGGEDGVVRI 168
G+ L +GS D ++LW+ K CI GH+ I ++ F+ + SG D +++
Sbjct: 414 SGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKV 473
Query: 169 GASFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPGGTKAKIDVT 228
+ ++ S ++L + + +SV + N SL + ++ R D+
Sbjct: 474 WSLDGISEDSEEPINLK-TRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLV 532
Query: 229 RIEENAESEDQAGEEELFATIANPCDYSAIFQPHRSL--NRSGTCVPVSVSRTSLSILPQ 286
+ + + E F+T+ + C +A + G+C+ TS S+L
Sbjct: 533 HVVTLKGHKRRIFSVE-FSTV-DQCVMTASGDKTVKIWAISDGSCLKTFEGHTS-SVLRA 589
Query: 287 SPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLK 346
S + S AD + W++ ++T +++ + L + E + G + +
Sbjct: 590 SFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAV- 648
Query: 347 VYGWEPARQYDAQPMGWGKVQDLAVTGTQL 376
+ W + D + + K ++ + G +L
Sbjct: 649 INLWHDSTASDKED-DFRKEEEAILRGQEL 677
Score = 145 (56.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 35/143 (24%), Positives = 65/143 (45%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G +A D +N+ S+ ++ G S + ++ ++ L + S I++W+L
Sbjct: 31 GSFIACACGDV-INIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDL 89
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
R+ GH+ + + H G L + D + +WD+ C + +RGH ++S
Sbjct: 90 ETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSS 149
Query: 148 IRFSPDGQW--IASGGEDGVVRI 168
I F PD + SG +D VR+
Sbjct: 150 ILFHPDSNKNILISGSDDATVRV 172
Score = 142 (55.0 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 45/156 (28%), Positives = 68/156 (43%)
Query: 27 SGQVL-ATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS-AGCQSGSIKI 84
SG VL TG DK V LW +CI +GH+ + +V F + +G ++K+
Sbjct: 414 SGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKV 473
Query: 85 WNL-------AVPTVQRTLN---GHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC 134
W+L P +T + H I SV +C+GS D +W L
Sbjct: 474 WSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVH 533
Query: 135 IYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
+ T +GH + I S+ FS Q + + D V+I A
Sbjct: 534 VVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWA 569
Score = 128 (50.1 bits), Expect = 0.00028, P = 0.00028
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEETLSAGCQSGSIKIWNL 87
Q + T DK V +WA+ +C+ + GH++ V F +G + +S G G +K+WN+
Sbjct: 554 QCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGAD-GLLKLWNV 612
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
T + H+ + ++ + + +G D+ I LW
Sbjct: 613 NTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 110 (43.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 43/176 (24%), Positives = 75/176 (42%)
Query: 23 LGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF---GNGEETLSAGCQS 79
LG + Q LA + ++V ++ + +C L+GH V S+ +G + G +
Sbjct: 367 LGDEE-QFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKD 425
Query: 80 GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG-DYLCSGSLDSFIKLWDL------RRK 132
++++WN + GH I +V F + SGS D +K+W L +
Sbjct: 426 KTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEE 485
Query: 133 GCIYTYRG----HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDL 184
R H K INS+ + + + +G ED R + + L + +HVV L
Sbjct: 486 PINLKTRSVVAAHDKDINSVAVARNDSLVCTGSED---RTASIWRLPDL-VHVVTL 537
Score = 69 (29.3 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 34/162 (20%), Positives = 64/162 (39%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVYGWEPAR- 354
++S D+TV W + S + T E ++S++ R +F G + +GL K++ +
Sbjct: 558 TASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSEC 617
Query: 355 --QYDA-QPMGW----GKVQDLAVTGTQLWFRRVGTWSHQDSGFSTLDSYSAGSPVSTMG 407
YD + W GK ++ TG + W H + D + G
Sbjct: 618 IATYDQHEDKVWALAVGKKTEMIATGGG--DAVINLW-HDSTASDKEDDFRKEEEAILRG 674
Query: 408 RERDQ-IVPMNLSAPIGLDMEQFLP-KSYQTHQGKSSMSESE 447
+E + ++ + I L E P K ++ G +S+
Sbjct: 675 QELENAVLDAEYTKAIRLAFELCRPHKVFELFSGLCRKRDSD 716
Score = 54 (24.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 20/60 (33%), Positives = 27/60 (45%)
Query: 297 SSSADRTVNFWDL-----EKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
S S D TV WDL EK L + EK+ S + + SE G L + + V W+
Sbjct: 163 SGSDDATVRVWDLNAKNTEKKCL-AIMEKHFSAVTSIALSEDGLTLFSAGRDKV-VNLWD 220
Score = 52 (23.4 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 297 SSSADRTVNFWDLEKFSLVST 317
S+ D+ VN WDL +S +T
Sbjct: 209 SAGRDKVVNLWDLHDYSCKAT 229
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 192 (72.6 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 37/156 (23%), Positives = 75/156 (48%)
Query: 15 GASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS 74
G S+ ++ + ++A G D + +W K C ++ + H V ++++ L+
Sbjct: 63 GPSLAVTSIASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLA 122
Query: 75 AGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC 134
+G + I +W++ + L GH+ +T + F G L S S D F+++WDL + C
Sbjct: 123 SGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHC 182
Query: 135 IYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
+ GH + S+ P+ +++ +G D +R A
Sbjct: 183 MQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYA 218
Score = 148 (57.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 34/122 (27%), Positives = 63/122 (51%)
Query: 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLW-ALGKSNCIMSLSGHSTPVESVQFGN 68
+F +H +V L K G +LA+G D + LW +G+S + L GH V + F +
Sbjct: 101 NFNSHKGAVTALRYNKV-GSMLASGSKDNDIILWDVVGESG-LFRLRGHRDQVTDLVFLD 158
Query: 69 GEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
G + L + + +++W+L + ++GH S + SVD P Y+ +GS D ++ +
Sbjct: 159 GGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYA 218
Query: 129 LR 130
++
Sbjct: 219 VK 220
Score = 148 (57.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 35/131 (26%), Positives = 56/131 (42%)
Query: 37 DKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTL 96
D V ++ + +SL GH PV + + E + G Q ++KIW L +++
Sbjct: 561 DSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSI 620
Query: 97 NGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQW 156
H S+ V F YL S D +K WD + + T GH I + S G +
Sbjct: 621 FAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDF 680
Query: 157 IASGGEDGVVR 167
+ +G D +R
Sbjct: 681 LVTGSHDRSMR 691
Score = 138 (53.6 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 32/115 (27%), Positives = 52/115 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V C+ + G+++ TG DK + +W L +C S+ H V V+F L
Sbjct: 581 HKLPVMCIDISS-DGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYL 639
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWD 128
+ + +K W+ TL GH + I + GD+L +GS D ++ WD
Sbjct: 640 FSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 69 (29.3 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG 340
S DR V +WD +KF + T E + + I L S G+ L+ G
Sbjct: 641 SIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTG 684
Score = 40 (19.1 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 299 SADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS 331
SAD V FW+ + +K+ ++LT S
Sbjct: 506 SADHEVKFWEYQ------VKQKSGKATKKLTVS 532
Score = 39 (18.8 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 467 QRSLGLVYMAVNNKNMEAGIDTALSMNDGTVMID 500
+ SLG + +++NN ++E S N TV I+
Sbjct: 369 KESLGTLALSLNNNSLEF-YSLKSSENAKTVTIE 401
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 208 (78.3 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 44/156 (28%), Positives = 72/156 (46%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
AH VN + + K G+++A+ DK + LW + L GH V + F
Sbjct: 463 AHDRDVNAIQVSK-DGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQ 521
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
L++G +I+IWN+ +TL GH +I + + G + S + D +K+W L
Sbjct: 522 LASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSG 581
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T H + ++ DG + SGG D VV +
Sbjct: 582 ECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSV 617
Score = 198 (74.8 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 48/170 (28%), Positives = 85/170 (50%)
Query: 11 FMAHGASVNCLALGKK--SGQ--VLATGGDD---KKVNLWA-LGKSN----CIMSLSGHS 58
F H ASV +ALG +G LA+ D K+ NL + L KS+ + ++ H
Sbjct: 406 FTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHD 465
Query: 59 TPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG 118
V ++Q +++ Q +IK+W+ + V L GH+ + + F+P+ L SG
Sbjct: 466 RDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASG 525
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D I++W++ + C+ T GH+ +I + + G + S DG+V++
Sbjct: 526 SGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKV 575
Score = 186 (70.5 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 43/153 (28%), Positives = 74/153 (48%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
V LA+ S +++A + + ++ + I S+ H TPV ++ L+ G
Sbjct: 64 VTALAITSDSKKLIAAFRS-RLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGG 122
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDF--HPYGDYLCSGSLDSFIKLWDLRRKGCI 135
G +K+W++A V + GH I+++ F H L SG+ DS ++LWDL +
Sbjct: 123 AEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSM 182
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ GHS I + F P G ++ SG D V++
Sbjct: 183 AVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQV 215
Score = 180 (68.4 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 40/164 (24%), Positives = 80/164 (48%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
+ + AH V + + + +LATGG + V +W + + S GH + ++ F
Sbjct: 95 RIKSMKAHETPVITMTIDP-TNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCF 153
Query: 67 GNGEET--LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFI 124
G + T L++G +++W+L GH S I + F P G +L SGS D +
Sbjct: 154 GKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTV 213
Query: 125 KLWDLRRKGCIYTYRG-HS-KSINSIRFSPDGQWIASGGEDGVV 166
++W+++++ + T HS ++I + P+ + + + GE ++
Sbjct: 214 QVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLI 257
Score = 136 (52.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 25/98 (25%), Positives = 50/98 (51%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPV-ESVQFGNGEETLSAGCQSGSIKIWNLAV 89
LA+G D+ + +W + C+ +L GH+ + + + G + +SA G +K+W+L+
Sbjct: 522 LASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAAD-GLVKVWSLSS 580
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
TL+ H+ + ++ G L SG D+ + +W
Sbjct: 581 GECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 72 (30.4 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVY 348
S S DRT+ W+++ V T E ++ I +L + G ++ +GL KV+
Sbjct: 524 SGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVW 576
Score = 55 (24.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA-RQ 355
S++AD V W L V+T + + + L G L+ G + + V W+ +
Sbjct: 566 SAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAV-VSVWKDVTEE 624
Query: 356 YDAQ 359
Y A+
Sbjct: 625 YIAK 628
Score = 54 (24.1 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 288 PMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGG--ECLLGGDTEGL 345
P F+L S S D+TV W+++K S V T S + + + G E +L EG
Sbjct: 199 PTGSFLL--SGSRDKTVQVWNIKKRSAVRTIPVFHS-VEAIGWVNGQPEEKILYTAGEGN 255
Query: 346 KVYGWE 351
+ W+
Sbjct: 256 LILAWD 261
>ZFIN|ZDB-GENE-070112-342 [details] [associations]
symbol:gnb5a "guanine nucleotide binding protein (G
protein), beta 5a" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 ZFIN:ZDB-GENE-070112-342 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE OrthoDB:EOG4XWFXZ EMBL:AL954697 EMBL:BC129375
IPI:IPI00512905 RefSeq:NP_001073650.1 UniGene:Dr.108630 SMR:A1L271
Ensembl:ENSDART00000027720 GeneID:562813 KEGG:dre:562813 CTD:562813
InParanoid:A1L271 NextBio:20884602 Uniprot:A1L271
Length = 355
Score = 200 (75.5 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 47/166 (28%), Positives = 79/166 (47%)
Query: 9 EDFMAHGASVNCLALG-KKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG 67
+ F H A V CL L ++G +GG DKK +W + C+ S H + + SV++
Sbjct: 191 QSFHGHAADVLCLDLAPSETGNTFVSGGCDKKACVWDMRTGQCVQSFESHDSDINSVRYY 250
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVDFHPYGDYLCSGSLDSFI 124
+ ++G + ++++L + + +S I +SVDF G L G D I
Sbjct: 251 PSGDAFASGSDDATCRLYDLRADR-EVAIYSKESIIFGASSVDFSLSGRLLFGGYNDYTI 309
Query: 125 KLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
+WD+ + + GH ++++R SPDG SG D +RI A
Sbjct: 310 NVWDVLKGARVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRIWA 355
Score = 174 (66.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 39/150 (26%), Positives = 74/150 (49%)
Query: 27 SGQVLATGGDDKKVNLW--ALGKSNCIM----SLSGHSTPVESVQFGNGEETLSAGCQSG 80
SG +A GG D K +++ +L K+ + S++ H+ + + F N + + G
Sbjct: 118 SGCAVACGGLDNKCSVYPLSLDKNENLAAKKKSVAMHTNYLSACCFTNSDMQILTSSGDG 177
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPY--GDYLCSGSLDSFIKLWDLRRKGCIYTY 138
+ +W++ + ++ +GH + + +D P G+ SG D +WD+R C+ ++
Sbjct: 178 TCALWDVESGQMLQSFHGHAADVLCLDLAPSETGNTFVSGGCDKKACVWDMRTGQCVQSF 237
Query: 139 RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
H INS+R+ P G ASG +D R+
Sbjct: 238 ESHDSDINSVRYYPSGDAFASGSDDATCRL 267
Score = 50 (22.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 301 DRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG 340
D T+N WD+ K + VS + + + L S G G
Sbjct: 306 DYTINVWDVLKGARVSILFGHENRVSTLRVSPDGTAFCSG 345
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 193 (73.0 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 61/193 (31%), Positives = 92/193 (47%)
Query: 17 SVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP------VESVQFGNGE 70
SV C G+ LATG + + ++ + I L S+ V SV F
Sbjct: 300 SVICYVRFSADGKFLATGCN-RAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDG 358
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ L+ G + I+IW++A V R L GH+ I S+DF G L SGS D + LWD+
Sbjct: 359 KYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVE 418
Query: 131 ---RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLV 187
+K ++T G + ++ FSPDGQ+IA+G D V+RI S +H + S+
Sbjct: 419 AGEQKLILHTDDG----VTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVY 474
Query: 188 HPLGTPPPQYTSS 200
+P +Y S
Sbjct: 475 SVAFSPDGKYLVS 487
Score = 185 (70.2 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 49/153 (32%), Positives = 70/153 (45%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
GQ +A G DK + +W + L GH V SV F + L +G +IK+W L
Sbjct: 441 GQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWEL 499
Query: 88 -----AVPTV-------QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI 135
P++ ++T GHK I SV P G ++ SGS D I+ W
Sbjct: 500 QCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQ 559
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
T +GH+ S+ S+ SP+G A+G D RI
Sbjct: 560 LTLQGHNNSVISVAVSPNGHCFATGSGDLRARI 592
Score = 61 (26.5 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350
S S DRT+ FW + T + +++++ + S G C G + L+ W
Sbjct: 541 SGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGD-LRARIW 593
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 209 (78.6 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVES 63
K + + F+ H V + S Q L + +D LW++ + ++ GH+ PV
Sbjct: 668 KESEFKTFLGHSGPVYGCSFSPDS-QYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWD 726
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
V F + + ++W + R GH S +V FHP +YL +GS D
Sbjct: 727 VSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKS 786
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED 163
+LW+++ C+ + GH I ++ FSPDG+ +A+ GED
Sbjct: 787 ARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGED 826
Score = 192 (72.6 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 46/161 (28%), Positives = 73/161 (45%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G AT D+ LW + + +GH + +V+F L+ G S ++W +
Sbjct: 733 GFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEI 792
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
R GH++ I +V F P G L + D+ + LWDL + GH+K + S
Sbjct: 793 QTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYS 852
Query: 148 IRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVH 188
+ FS DG +ASG D VR+ N+S+ SL++
Sbjct: 853 LDFSCDGSILASGSSDCTVRLWDVKKAFNSSLSTQPSSLIN 893
Score = 149 (57.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 33/138 (23%), Positives = 58/138 (42%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
L +G L K + + GHS PV F + L + + + ++W++
Sbjct: 652 LNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETM 711
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
+ GH + V F P+G Y + S D +LW + + GH N++RF
Sbjct: 712 SNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRF 771
Query: 151 SPDGQWIASGGEDGVVRI 168
P+ ++A+G D R+
Sbjct: 772 HPNINYLATGSNDKSARL 789
Score = 145 (56.1 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 38/152 (25%), Positives = 67/152 (44%)
Query: 43 WALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSS 102
+A S+ +++G E+ + L++G S S K+ + +T GH
Sbjct: 622 FASSASSASSAMNGSGNNNENNKSTTANNNLNSGSSSSSNKLQKQQKESEFKTFLGHSGP 681
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
+ F P YL S S D+ +LW + + Y+GH+ + + FSP G + A+
Sbjct: 682 VYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASH 741
Query: 163 DGVVRIGASFHLTNTSI---HVVDLSLV--HP 189
D R+ + H++ I H+ D + V HP
Sbjct: 742 DRTARLWTTNHISPLRIFTGHLSDCNTVRFHP 773
Score = 60 (26.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 21/93 (22%), Positives = 40/93 (43%)
Query: 267 RSGTCVPVSVS-RTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTI 325
++G CV + + R + + SP + T D +V WDL V + ++ +
Sbjct: 793 QTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGE--DTSVILWDLSTGKKVKKMDGHTKCV 850
Query: 326 RRLTFSEGGECLLGGDTEGLKVYGWEPARQYDA 358
L FS G L G ++ V W+ + +++
Sbjct: 851 YSLDFSCDGSILASGSSD-CTVRLWDVKKAFNS 882
Score = 50 (22.7 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 294 LTTSSSADRTVNFWDLEK-FSLVSTTEKNS 322
+ S S+D TV WD++K F+ +T+ +S
Sbjct: 861 ILASGSSDCTVRLWDVKKAFNSSLSTQPSS 890
Score = 46 (21.3 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
L T S+ D++ W+++ V + + I + FS G LL E V W+
Sbjct: 778 LATGSN-DKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGR-LLATAGEDTSVILWD 833
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 212 (79.7 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 61/222 (27%), Positives = 111/222 (50%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
LA+ DDK + +W + L GH V+ V + + + +G + +IKIW+
Sbjct: 224 LASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSS 283
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
TL+GHKS+++ V+++ G+++ S S D +K++D+R + T++GH K + ++
Sbjct: 284 QNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALAL 343
Query: 151 SPDGQWI-ASGGEDGVVR---IGASFHLTNT-SIHVVDL-SLV-HPLGTPPPQYTSSVPF 203
P + + SG +DG + +G S H D+ SL HP+G +S
Sbjct: 344 HPYHEDLFVSGDKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHPIG----HILASGSN 399
Query: 204 SHNTSLRKSFTKGRPGGT-KAKIDVTRIEENAESEDQAGEEE 244
H T K +++ RP T K K + ++ E+E+ A ++E
Sbjct: 400 DHTT---KFWSRNRPADTMKDKYNNPNASKDIENEEDADDQE 438
Score = 180 (68.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 37/156 (23%), Positives = 72/156 (46%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
AH ++V + + + + +G D + W +N + + + + + F +
Sbjct: 165 AHDSAVRSI-IWSHNEDWMVSGDDSGNIKYWQPNMNNVKIFKAHEQSKIRGLSFSPTDLK 223
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
L++ IKIW+ A T L GH + V +HP + SG D+ IK+WD +
Sbjct: 224 LASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSS 283
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
I T GH +++ + ++ +G WI S D ++++
Sbjct: 284 QNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKV 319
Score = 170 (64.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 42/164 (25%), Positives = 74/164 (45%)
Query: 3 AKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVE 62
A+ + + HG V C++ + ++ +GG D + +W S I +L GH + V
Sbjct: 239 ARCTEDNQLVGHGWDVKCVSWHPQKS-LIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVS 297
Query: 63 SVQFG-NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG-DYLCSGSL 120
V++ NG +SA +K++++ +T GH +T++ HPY D SG
Sbjct: 298 KVEWNQNGNWIVSASSDQ-LLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDK 356
Query: 121 DSFIKLWDLRR-KGCIYTYRGHSKSINSIRFSPDGQWIASGGED 163
D I W + + + H + S+ + P G +ASG D
Sbjct: 357 DGKILYWIVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGSND 400
Score = 162 (62.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 47/167 (28%), Positives = 77/167 (46%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
+NC++ + G+ L TG + LW N L H + V S+ + + E+ + +G
Sbjct: 128 INCVSWTPE-GRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGD 186
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSS-ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIY 136
SG+IK W + V + H+ S I + F P L S + D IK+WD R C
Sbjct: 187 DSGNIKYWQPNMNNV-KIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFAR--CTE 243
Query: 137 TYR--GHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN-TSIH 180
+ GH + + + P I SGG+D ++I + N T++H
Sbjct: 244 DNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLH 290
Score = 113 (44.8 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 28/110 (25%), Positives = 48/110 (43%)
Query: 60 PVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGS 119
P+ V + L G SG +WN + L H S++ S+ + D++ SG
Sbjct: 127 PINCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGD 186
Query: 120 LDSFIKLWDLRRKGCIYTYRGHSKS-INSIRFSPDGQWIASGGEDGVVRI 168
IK W + ++ H +S I + FSP +AS +D +++I
Sbjct: 187 DSGNIKYWQPNMNN-VKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKI 235
Score = 66 (28.3 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVY 348
L S D + WD + ++T + ST+ ++ +++ G ++ ++ L KV+
Sbjct: 265 LIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVF 320
Score = 52 (23.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 30/143 (20%), Positives = 55/143 (38%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECL-LGGDTEGLKVYGW----- 350
S+S+D+ + +D+ + T + + + L E L + GD +G K+ W
Sbjct: 310 SASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDG-KILYWIVGNP 368
Query: 351 EP------ARQYDAQPMGWGKVQDLAVTGTQLWFRRVGTWSHQDSGFSTLDSYSAGSPVS 404
EP A D + W + + +G+ + WS + D Y+ +
Sbjct: 369 EPQAEIHSAHDADVWSLSWHPIGHILASGSNDHTTKF--WSRNRPADTMKDKYNNPNASK 426
Query: 405 TMGRERD-QIVPMNLSAPIGLDM 426
+ E D +LS P GL +
Sbjct: 427 DIENEEDADDQESDLSLP-GLSL 448
Score = 42 (19.8 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 408 RERDQIVPMNLSAPIGLD-MEQFLPKSYQ 435
+++ Q+ P S+P +D M+ LP Q
Sbjct: 489 QQQQQLQPQQQSSPPPIDLMQSMLPNQQQ 517
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 194 (73.4 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 48/174 (27%), Positives = 81/174 (46%)
Query: 1 MRAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
+RA H +V +A +G+ LA+G D V W L + GH
Sbjct: 102 VRAVTRCTSSLEGHSEAVISVAFSP-TGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHW 160
Query: 61 VESVQFGNGEETLSAGCQSGSIKIWNLAVPT-VQRTLNGHKSSITSVDFHPYG-----DY 114
V S+ + + L++GC++G I +W+ + T V RTL GH IT + + P Y
Sbjct: 161 VLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRY 220
Query: 115 LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ S S D +++WD C GH++S+ +R+ DG + S +D +++
Sbjct: 221 VASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKV 273
Score = 187 (70.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 40/139 (28%), Positives = 73/139 (52%)
Query: 31 LATGGDDKKVNLWALGKSNCIMS-LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
L +G DD + LW+ + ++ ++GH + V F +++ SIK+W+
Sbjct: 346 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 405
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+L GH +++ + + L SGS DS +K+WD++ + GH+ + ++
Sbjct: 406 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVD 465
Query: 150 FSPDGQWIASGGEDGVVRI 168
+SPDGQ +ASGG+D +RI
Sbjct: 466 WSPDGQRVASGGKDKCLRI 484
Score = 148 (57.2 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 44/159 (27%), Positives = 73/159 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGG-DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
HG VN +AL + L TG + + + A + L ++ ++ G G E
Sbjct: 288 HGHWVNTMALS--TDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPER 345
Query: 73 LSAGCQSGSIKIWNLAV---PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
L +G ++ +W+ A P + T GH++ I V F P + S S D IKLWD
Sbjct: 346 LVSGSDDFTLFLWSPAEDKKPLARMT--GHQALINQVLFSPDSRIVASASFDKSIKLWDG 403
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
R + + RGH ++ I +S D + + SG D +++
Sbjct: 404 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKV 442
Score = 144 (55.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H A +N + S +++A+ DK + LW + SL GH V + + L
Sbjct: 373 HQALINQVLFSPDS-RIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 431
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+G ++K+W++ + L GH + +VD+ P G + SG D +++W
Sbjct: 432 VSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 122 (48.0 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 35/132 (26%), Positives = 63/132 (47%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCI-MSLSGHSTPVESVQFG----NGE-ETLSAGCQSGS 81
G+ LA+G + ++ LW + +L+GHS + + + N E +++ + GS
Sbjct: 170 GKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGS 229
Query: 82 IKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGH 141
+++W+ +R L GH S+T + + G L S S D IK+W T +GH
Sbjct: 230 VRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGH 288
Query: 142 SKSINSIRFSPD 153
+N++ S D
Sbjct: 289 GHWVNTMALSTD 300
Score = 56 (24.8 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
L S S+D T+ WD++ L + ++ + + +S G+ + GG + L+++
Sbjct: 430 LLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 56 (24.8 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 13/63 (20%), Positives = 31/63 (49%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
+ S+S D+++ WD +++ + + + ++ +S L+ G ++ LKV W+
Sbjct: 388 IVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKV--WDV 445
Query: 353 ARQ 355
Q
Sbjct: 446 KAQ 448
Score = 41 (19.5 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS 331
L S+S DRT+ W L T + + + + S
Sbjct: 261 LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS 298
>RGD|1306281 [details] [associations]
symbol:Aamp "angio-associated, migratory cell protein"
species:10116 "Rattus norvegicus" [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0014909 "smooth muscle cell migration"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306281 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 CTD:14
GeneTree:ENSGT00690000102167 OMA:VWSFEVG EMBL:CH474004
RefSeq:NP_001100390.1 UniGene:Rn.13592 ProteinModelPortal:G3V7V2
PRIDE:G3V7V2 Ensembl:ENSRNOT00000019497 GeneID:301512
KEGG:rno:301512 NextBio:648863 Uniprot:G3V7V2
Length = 435
Score = 202 (76.2 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 45/158 (28%), Positives = 73/158 (46%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H ASV C++L K+ + TGG+D K +W L + +GH V F +
Sbjct: 88 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 147
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
++ G SG +K+W V T + + + +++HP L +G+ D +W +
Sbjct: 148 TLVATGDMSGLLKVWQ--VETKEEVWSFEAGDLEWMEWHPRAPVLLAGTADGNTWMWKVP 205
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C T++G + R PDG+ G EDG +RI
Sbjct: 206 NGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRI 242
Score = 45 (20.9 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 301 DRTVNFWDLEK---FSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
D T+ WDL++ ++ TE + + + ++ G +L G +
Sbjct: 237 DGTIRIWDLKQGNPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVD 282
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 185 (70.2 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 48/171 (28%), Positives = 81/171 (47%)
Query: 2 RAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPV 61
+ +E + H SV CL ++ V+ TG D V +W + + +L H+ V
Sbjct: 240 KTSLECLKVLTGHTGSVLCLQYDER---VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAV 296
Query: 62 ESVQFGNGEETLSAGCQSG-SIKIWNLAVPT---VQRTLNGHKSSITSVDFHPYGDYLCS 117
++F NG L C SI +W++A PT ++R L GH++++ VDF Y+ S
Sbjct: 297 LHLRFSNG---LMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVS 351
Query: 118 GSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D IK+W + T GH + I +++ + + SG D +R+
Sbjct: 352 ASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 400
Score = 175 (66.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 46/146 (31%), Positives = 71/146 (48%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMS---LSGHSTPVESVQFGNGEETLSAGCQSGSIK 83
S ++ T D+ + +W + I L GH V V F + ++G ++ IK
Sbjct: 302 SNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRT--IK 359
Query: 84 IWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC-SGSLDSFIKLWDLRRKGCIYTYRGHS 142
+W+ + RTLNGHK I + Y D L SGS D+ I+LWD+ C+ GH
Sbjct: 360 VWSTSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 416
Query: 143 KSINSIRFSPDGQWIASGGEDGVVRI 168
+ + IRF D + I SG DG +++
Sbjct: 417 ELVRCIRF--DNKRIVSGAYDGKIKV 440
Score = 134 (52.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 38/164 (23%), Positives = 78/164 (47%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H A+VN + K +++ GD + + +W+ + +L+GH + +Q+ +
Sbjct: 333 VGHRAAVNVVDFDDK--YIVSASGD-RTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DR 387
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR- 130
+ +G +I++W++ R L GH+ + + F + SG+ D IK+WDL+
Sbjct: 388 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLQA 445
Query: 131 ----RKG----CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
R C+ T HS + ++F + Q I+S +D ++
Sbjct: 446 ALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIISSSHDDTIL 488
Score = 125 (49.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 36/170 (21%), Positives = 74/170 (43%)
Query: 2 RAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPV 61
R +++ + + V CL + + + +G D + +W C+ L+GH+ V
Sbjct: 200 RHNLQRIQCRSENSKGVYCL---QYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV 256
Query: 62 ESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD 121
+Q+ E + G ++++W++ V TL H ++ + F + + S D
Sbjct: 257 LCLQYD--ERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKD 312
Query: 122 SFIKLWDLRRKGCIYTYR---GHSKSINSIRFSPDGQWIASGGEDGVVRI 168
I +WD+ I R GH ++N + F D ++I S D +++
Sbjct: 313 RSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV 360
Score = 118 (46.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 30/111 (27%), Positives = 55/111 (49%)
Query: 43 WALGKSNC--IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK 100
W G+ N I S +S V +Q+ +E + +G + SIKIW+ + L GH
Sbjct: 196 WRCGRHNLQRIQCRSENSKGVYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHT 253
Query: 101 SSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151
S+ + + + +GS DS +++WD+ + T H++++ +RFS
Sbjct: 254 GSVLCLQYDER--VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 302
Score = 66 (28.3 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
L S S+D T+ WD+E + + E + +R + F + ++ G +G K+ W+
Sbjct: 388 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN--KRIVSGAYDG-KIKVWD 442
Score = 44 (20.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSE 332
S+S DRT+ W V T + I L + +
Sbjct: 351 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD 386
Score = 43 (20.2 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 442 SMSESELMSTIFNGHDKMMAVLRNRQR 468
S S E + T+ NGH + +A L+ R R
Sbjct: 362 STSTCEFVRTL-NGHKRGIACLQYRDR 387
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 199 (75.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 7 KAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF 66
K + H A ++ AL ++ TG DK LW C+ +L+GH + F
Sbjct: 253 KVHTLIGHCAEISS-ALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCF 311
Query: 67 GNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKL 126
+ ++ G+ +++N L GH+ I+ + F+P G+ L +GS D ++
Sbjct: 312 DYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARI 371
Query: 127 WDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
WD++ C+ GH+ I S F+ G + +G +D RI
Sbjct: 372 WDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRI 413
Score = 197 (74.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 45/158 (28%), Positives = 72/158 (45%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H A + CL+ +S V+ATG D LW + +++L+GH + S+ F
Sbjct: 173 FRGHTAEIVCLSFNPQS-TVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSG 231
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ + G ++ +W+ + TL GH + I+S F + +GS+D LWD
Sbjct: 232 DRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDAT 291
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T GH I F G+ IA+ DG R+
Sbjct: 292 SGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARV 329
Score = 195 (73.7 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 45/161 (27%), Positives = 69/161 (42%)
Query: 3 AKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVE 62
A E+ H V +A G +ATG DK LW+ C + GH+ +
Sbjct: 122 ASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIV 181
Query: 63 SVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDS 122
+ F ++ G + K+W++ TL GH + I S+ F GD + +GS D
Sbjct: 182 CLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDH 241
Query: 123 FIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGED 163
+ +WD ++T GH I+S FS D I +G D
Sbjct: 242 TVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMD 282
Score = 195 (73.7 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 82/341 (24%), Positives = 142/341 (41%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGN--GE 70
AH + +AL K +G TG D+ +W + +L GH V ++ F N G+
Sbjct: 90 AHILPLTNVALNK-AGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGD 148
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ ++ G + K+W+ T GH + I + F+P + +GS+D+ KLWD++
Sbjct: 149 K-IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQ 207
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI-GASFHLTNTSIHVVDLSLVHP 189
+ T GH I S+ F G I +G D V + AS T +H + + H
Sbjct: 208 SGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDAS---TGRKVHTL---IGHC 261
Query: 190 LGTPPPQYTSSVPFSHNTSLRKSFTKGRP----GGTKAKIDVTRIEENAESEDQAGEE-- 243
SS FS + SL + + + T K T + E D +
Sbjct: 262 AEI------SSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTG 315
Query: 244 ELFATIANPCDYSAIFQPHRSLNRSGTCVP-VSVSRTSLSILPQSPMLCFILTTSSSADR 302
+L AT + D +A + + + R C+ + +S + +P +LT SS D+
Sbjct: 316 KLIATAS--ADGTA--RVYNATTRK--CITKLEGHEGEISKISFNPQGNRLLTGSS--DK 367
Query: 303 TVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
T WD++ + E ++ I F+ G ++ G +
Sbjct: 368 TARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKD 408
Score = 177 (67.4 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 34/116 (29%), Positives = 56/116 (48%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFH-PYG 112
L H P+ +V G + K+W+ A TL GH++ + ++ F+ PYG
Sbjct: 88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 113 DYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
D + +GS D KLW C +T+RGH+ I + F+P +A+G D ++
Sbjct: 148 DKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKL 203
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 40/163 (24%), Positives = 63/163 (38%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
E+ H A + L+ SG + TG D V +W + +L GH + S
Sbjct: 210 EEVVTLTGHLAEIISLSFDT-SGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSAL 268
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
F + G + +W+ TL GH I F G + + S D +
Sbjct: 269 FSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTAR 328
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+++ + CI GH I+ I F+P G + +G D RI
Sbjct: 329 VYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARI 371
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
+G+++AT D ++ CI L GH + + F L G + +IW+
Sbjct: 314 TGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD 373
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ + L GH I S F+ G+ + +GS D+ ++W
Sbjct: 374 VQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 51 (23.0 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 15/59 (25%), Positives = 24/59 (40%)
Query: 291 CFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVY 348
C ++ T S D+T WD V+T + I F G+ + +G +VY
Sbjct: 273 CSLILTGSM-DKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVY 330
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 199 (75.1 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 36/138 (26%), Positives = 67/138 (48%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
L + +D LW++ +++ GH+ PV V FG + + ++W+
Sbjct: 394 LLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHI 453
Query: 91 TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
R GH S + V FHP Y+ +GS D +LWD+ R + + GH++ + ++
Sbjct: 454 YPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAI 513
Query: 151 SPDGQWIASGGEDGVVRI 168
+PDG +AS +G++ +
Sbjct: 514 APDGHTMASADSEGLIHL 531
Score = 188 (71.2 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 55/190 (28%), Positives = 82/190 (43%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
+ H V +A G G AT D+ LW+ + +GH + V+ V F
Sbjct: 417 YKGHTGPVWDVAFGP-FGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNS 475
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ G + ++W++ R NGH +T+V P G + S + I LWD+
Sbjct: 476 AYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIG 535
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVVDLSLVHPL 190
I T RGH +I S+ FS + + SGG D VR F TN + + V SL +
Sbjct: 536 TGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFK-TNYN-NPVSSSLTGSV 593
Query: 191 GTPPPQYTSS 200
TP TS+
Sbjct: 594 VTPFSAKTST 603
Score = 149 (57.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 38/165 (23%), Positives = 67/165 (40%)
Query: 17 SVNCLALGKKSGQVLATGGDDKKVNLWA-------LGKSNCIMSLSG------HSTPVES 63
++NC S ++A G + + LW+ L KS + G HS PV
Sbjct: 326 NMNCAEFSPDS-TMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYG 384
Query: 64 VQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
F + L + + S ++W++ T GH + V F P+G Y + S D
Sbjct: 385 TTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQT 444
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+LW + + GH ++ + F P+ ++ +G D R+
Sbjct: 445 AQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRL 489
Score = 121 (47.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 35/160 (21%), Positives = 69/160 (43%)
Query: 48 SNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL-----AVP---TVQRT---- 95
S C+ + + + +F ++ G Q I++W++ ++P +V+ +
Sbjct: 314 SVCMYTFHHTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSV 373
Query: 96 -LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDG 154
L H + F P YL S S D+ +LW + K + Y+GH+ + + F P G
Sbjct: 374 RLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFG 433
Query: 155 QWIASGGEDGVVRIGASFHLTNTSI---HVVDLSLV--HP 189
+ A+ D ++ + H+ + H+ D+ V HP
Sbjct: 434 HYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHP 473
Score = 73 (30.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 288 PMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKV 347
P ++LT SS D+T WD+ + V ++ + + + G + D+EGL +
Sbjct: 473 PNSAYVLTGSS--DKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGL-I 529
Query: 348 YGWE 351
+ W+
Sbjct: 530 HLWD 533
Score = 54 (24.1 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 296 TSSSADRT--VNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
T +SAD ++ WD+ + T + I L+FS L+ G ++ V W+
Sbjct: 519 TMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSD-CTVRAWD 575
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 207 (77.9 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 45/168 (26%), Positives = 80/168 (47%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCI-MSLSGHSTPVES 63
+E+ F AH + L + V+++ DD V +W + S GH+ V
Sbjct: 89 LERVHQFEAHSDYLRSLVVHPTLPYVISSS-DDMLVKMWDWDNKWAMKQSFEGHTHYVMQ 147
Query: 64 VQFG-NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD--YLCSGSL 120
+ T + ++K+W TL GH+ + VD++ G+ Y+ SG+
Sbjct: 148 IAINPKDNNTFATASLDKTVKVWQFGSNVPNFTLEGHEKGVNCVDYYHGGEKPYIISGAD 207
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
D +K+WD + K C+ T GH+++++S+ F P+ I +G ED VR+
Sbjct: 208 DHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHPELPLIITGSEDSTVRL 255
Score = 119 (46.9 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 38/172 (22%), Positives = 71/172 (41%)
Query: 1 MRAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
M +++ +A V C+ L +LA + V++W + S P
Sbjct: 1 MPLRLDVKRKLLARSDRVKCVDLHPVETWLLAALYNGN-VHIWNYETQTLVKSFEVCDVP 59
Query: 61 VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRT--LNGHKSSITSVDFHPYGDYLCSG 118
V + +F + + G I+++N T++R H + S+ HP Y+ S
Sbjct: 60 VRAAKFVPRKSWVVTGSDDMHIRVFNYN--TLERVHQFEAHSDYLRSLVVHPTLPYVISS 117
Query: 119 SLDSFIKLWDLRRKGCI-YTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
S D +K+WD K + ++ GH+ + I +P D A+ D V++
Sbjct: 118 SDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKV 169
Score = 60 (26.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 27/105 (25%), Positives = 42/105 (40%)
Query: 270 TCVPVSVSRT-SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328
TCV ++S + P L I+T S D TV W + L +T + +
Sbjct: 220 TCVQTLDGHAQNVSSVCFHPELPLIIT--GSEDSTVRLWHANTYRLETTLNYGLERVWCI 277
Query: 329 TFSEGGECLLGGDTEG---LKVYGWEPARQYDAQ-PMGWGKVQDL 369
+G + G EG LK+ EPA D+ + W K ++
Sbjct: 278 QAQKGANTIAIGYDEGSVTLKLGREEPAVSMDSSGKILWAKHSEI 322
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 192 (72.6 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 41/145 (28%), Positives = 70/145 (48%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
+ GQ +A+ G DK + ++ ++ + H V F + + ++ +KIW
Sbjct: 625 QDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIW 684
Query: 86 NLAVPTVQRTLNGHKSSITSVDFHPYGDYL--CSGSLDSFIKLWDLRRKGCIYTYRGHSK 143
+ + T H + F ++L +GS DSF+KLWDL +K C T GH+
Sbjct: 685 DSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGHTN 744
Query: 144 SINSIRFSPDGQWIASGGEDGVVRI 168
S+ RFSPD + +AS DG +++
Sbjct: 745 SVTHCRFSPDDELLASCSADGTLKL 769
Score = 177 (67.4 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 48/147 (32%), Positives = 63/147 (42%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
EK D AH V C A + AT DKKV +W G + + HS V
Sbjct: 648 EKLLDIKAHEDEVLCCAFSSDDSYI-ATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCH 706
Query: 66 FGNGEE--TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSF 123
F N L+ G +K+W+L + T+ GH +S+T F P + L S S D
Sbjct: 707 FTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGT 766
Query: 124 IKLWDLRRKGCIYTYRGHSKSINSIRF 150
+KLWD+R KSIN RF
Sbjct: 767 LKLWDVRSAN-------EKKSINVKRF 786
Score = 144 (55.7 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 32/141 (22%), Positives = 60/141 (42%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ L + +D + +W + L H V+ + LS G++K+WN+
Sbjct: 1015 GKTLISSSEDSVIQVWNWQTEEYVF-LQAHQETVKDFRLLRDSRLLSWSFD-GTVKVWNV 1072
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINS 147
++R H+ ++ S S S D K+W ++ +GH+ +
Sbjct: 1073 ITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSPLHELKGHNSCVRC 1132
Query: 148 IRFSPDGQWIASGGEDGVVRI 168
FS DG +A+G ++G +RI
Sbjct: 1133 SAFSLDGILLATGDDNGEIRI 1153
Score = 142 (55.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 42/155 (27%), Positives = 71/155 (45%)
Query: 14 HGASVNCLALGKKSGQVL-ATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
H VNC KS +L ATG +D + LW L + C ++ GH+ V +F +E
Sbjct: 698 HSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDEL 757
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDY-----LCSGSLD------ 121
L++ G++K+W++ ++++N + ++S D P D CS S D
Sbjct: 758 LASCSADGTLKLWDVRSANEKKSINVKRFFLSSED--PPEDVEVIVKCCSWSADGDRIIV 815
Query: 122 ---SFIKLWDLRRKGCIYT-YRGHSKSINSIRFSP 152
+ + L D+ G + + GH +I FSP
Sbjct: 816 AAKNKVLLLDIHTSGLLTEIHTGHHSTIQYCDFSP 850
Score = 115 (45.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 98 GHKSSITSVDFHPYGDYLCSGSLDSF-IKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQW 156
GH S+I DF PY D+L +L + ++LW++ + + RGH ++ + FSPDG
Sbjct: 838 GHHSTIQYCDFSPY-DHLAVIALSQYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSS 896
Query: 157 IASGGEDGVVRI 168
+ +D +R+
Sbjct: 897 FLTASDDQTIRV 908
Score = 109 (43.4 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 40/166 (24%), Positives = 68/166 (40%)
Query: 10 DFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNG 69
D++ A V+C L + +A G ++ + + L + S GH V +QF
Sbjct: 957 DYLPE-AQVSCCCLSPHL-EYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTAD 1014
Query: 70 EETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDY-LCSGSLDSFIKLWD 128
+TL + + I++WN L H+ ++ DF D L S S D +K+W+
Sbjct: 1015 GKTLISSSEDSVIQVWNWQTEEYV-FLQAHQETVK--DFRLLRDSRLLSWSFDGTVKVWN 1071
Query: 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHL 174
+ + H ++ S S D +S D +I SF L
Sbjct: 1072 VITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW-SFEL 1116
Score = 69 (29.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 296 TSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG 344
+S+SAD+T W E S + + ++S +R FS G L GD G
Sbjct: 1101 SSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFSLDGILLATGDDNG 1149
Score = 38 (18.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 429 FLPKSYQTHQGKSSMSESELMSTIFNGHDKMMAVLRNR 466
FL +T + + +S L+S F+G K+ V+ R
Sbjct: 1039 FLQAHQETVKDFRLLRDSRLLSWSFDGTVKVWNVITGR 1076
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 193 (73.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 41/163 (25%), Positives = 76/163 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H + VN ++ ++ +G DD LW + + I + + +V F + + +
Sbjct: 137 HSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDAADKI 195
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR--- 130
G +K+W+L TL GH+ +IT + P G YL + +D+ + +WD+R
Sbjct: 196 FTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYA 255
Query: 131 -RKGCIYTYRGHS----KSINSIRFSPDGQWIASGGEDGVVRI 168
+ C+ + GH K++ +SPDG + +G D +V I
Sbjct: 256 PQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHI 298
Score = 174 (66.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 39/137 (28%), Positives = 65/137 (47%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESV-QFGNGEETLSAGCQSGSIKIWN 86
G + + DK V W + I ++ HS+ V S G + +G G+ K+W+
Sbjct: 108 GSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWD 167
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSIN 146
+ +T K IT+V F D + +G +D+ +K+WDLR+ T GH +I
Sbjct: 168 MRQRGAIQTFPD-KYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTIT 226
Query: 147 SIRFSPDGQWIASGGED 163
+ SPDG ++ + G D
Sbjct: 227 GMSLSPDGSYLLTNGMD 243
Score = 148 (57.2 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 40/145 (27%), Positives = 72/145 (49%)
Query: 27 SGQVLATGGDDKKVNLWAL-GKSNCIMSLSGHSTPVESVQF-GNGEETLSAGCQSGSIKI 84
+G ++A+G D+++ LW + G M L GH + + + +G + +SA +++
Sbjct: 64 AGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDK-TVRA 122
Query: 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC-SGSLDSFIKLWDLRRKGCIYTYRGHSK 143
W++ + + H S + S G L SGS D KLWD+R++G I T+ +
Sbjct: 123 WDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ 182
Query: 144 SINSIRFSPDGQWIASGGEDGVVRI 168
I ++ FS I +GG D V++
Sbjct: 183 -ITAVSFSDAADKIFTGGVDNDVKV 206
Score = 146 (56.5 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 38/146 (26%), Positives = 63/146 (43%)
Query: 33 TGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLAVPT 91
TGG D V +W L K M+L GH + + +G L+ G + + +W++
Sbjct: 197 TGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDN-KLCVWDMRPYA 255
Query: 92 VQ----RTLNGHK----SSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSK 143
Q + GH+ ++ + P G + +GS D + +WD + IY GH+
Sbjct: 256 PQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTG 315
Query: 144 SINSIRFSPDGQWIASGGEDGVVRIG 169
S+N F P I S D + +G
Sbjct: 316 SVNECVFHPTEPIIGSCSSDKNIYLG 341
Score = 122 (48.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 33/120 (27%), Positives = 55/120 (45%)
Query: 51 IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQ-RTLNGHKSSITSVDFH 109
IM LSGH + V +++F +++G I +W + L GHK++I + +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWT 105
Query: 110 PYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ-WIASGGEDGVVRI 168
G + S S D ++ WD+ I HS +NS + G I SG +DG ++
Sbjct: 106 SDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKL 165
Score = 67 (28.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 19/63 (30%), Positives = 26/63 (41%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPARQY 356
+ D V WDL K T E + TI ++ S G LL + K+ W+ R Y
Sbjct: 197 TGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDN-KLCVWD-MRPY 254
Query: 357 DAQ 359
Q
Sbjct: 255 APQ 257
Score = 57 (25.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 24/84 (28%), Positives = 38/84 (45%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVYGWEP 352
L S S D T WD+ + + T + I ++FS+ + + GG +KV W+
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDAADKIFTGGVDNDVKV--WD- 208
Query: 353 ARQYDAQPMGWGKVQDLAVTGTQL 376
R+ +A G QD +TG L
Sbjct: 209 LRKGEATMTLEGH-QD-TITGMSL 230
Score = 47 (21.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 296 TSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVY 348
T+ S+DR V+ WD + ++ ++ F E ++G + +Y
Sbjct: 288 TAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPT-EPIIGSCSSDKNIY 339
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 205 (77.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 45/150 (30%), Positives = 70/150 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H +N LA+ ++LATG D+ LWAL + + SGH + +VQF ++ L
Sbjct: 478 HDKDINSLAVSPND-KLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVL 536
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ G+IK+W L + +T GH +S+ V F G L S D +KLW ++
Sbjct: 537 ATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSNE 596
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGED 163
C+ T H + + S +GG D
Sbjct: 597 CVRTLDAHEDKVWGLHCSRLDDHAITGGSD 626
Score = 180 (68.4 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 47/170 (27%), Positives = 74/170 (43%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLW----ALGKSNC-----IMSLSGHSTP---- 60
H SV + + L TG D V LW AL N ++ L ST
Sbjct: 420 HTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRCHD 479
Query: 61 --VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG 118
+ S+ ++ L+ G Q + K+W L + +GH+ + +V F P L +
Sbjct: 480 KDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLATA 539
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D IKLW L+ C+ T+ GH S+ + F G + S G DG++++
Sbjct: 540 SADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKL 589
Score = 151 (58.2 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 34/100 (34%), Positives = 49/100 (49%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEETLSAGCQSGSIKIWNL 87
QVLAT D + LWAL +C+ + GH V V F G + LS+G G +K+W +
Sbjct: 534 QVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSG-SDGLLKLWTI 592
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
RTL+ H+ + + D+ +G DS I LW
Sbjct: 593 KSNECVRTLDAHEDKVWGLHCSRLDDHAITGGSDSRIILW 632
Score = 144 (55.7 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 30/111 (27%), Positives = 53/111 (47%)
Query: 57 HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC 116
H+ PV S+ F L+ G G++++W++ G + V FHP L
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLL 167
Query: 117 --SGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
S ++D+ I++W L+ + C+ H ++ S+ FS DG + S G D +
Sbjct: 168 LFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDKI 218
Score = 134 (52.2 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 39/141 (27%), Positives = 66/141 (46%)
Query: 46 GKSNCIMSLSGHSTPVESVQFGNGEET-LSAGCQSGSIKIWNL--AVPT----------- 91
G+ C+ SGH+ V ++ +E+ L G Q ++K+W L A+P+
Sbjct: 409 GQVACVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIP 468
Query: 92 --VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
Q T H I S+ P L +GS D KLW L + + + GH + + +++
Sbjct: 469 LQAQSTQRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQ 528
Query: 150 FSPDGQWIASGGEDGVVRIGA 170
FSP Q +A+ DG +++ A
Sbjct: 529 FSPTDQVLATASADGTIKLWA 549
Score = 113 (44.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 36/120 (30%), Positives = 53/120 (44%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET- 72
H A V +A S +LATGG D V +W + + G V V F + + T
Sbjct: 108 HTAPVASMAFDATS-TLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAF-HPDPTR 165
Query: 73 --LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L + SI++W+L + L H S++TS+ F G + S D +WDLR
Sbjct: 166 LLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDKICIVWDLR 225
Score = 104 (41.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 35/155 (22%), Positives = 68/155 (43%)
Query: 19 NCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEETLSAGC 77
+C L + +G +L D + L+ +G+S V V+F G + +
Sbjct: 297 HC-TLARAAGLLLTVTADHNLL-LYEARSLQLQKQFAGYSEEVLDVRFLGPNDSHIIVAS 354
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG---C 134
S +K++ L Q L+GH + ++D G S + D I++W + + G C
Sbjct: 355 NSPCLKVFELQTLACQ-ILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWRMNKAGQVAC 413
Query: 135 IYTYRGHSKSINSIRFSP-DGQWIASGGEDGVVRI 168
+ GH+ S+ +I S ++ +G +D V++
Sbjct: 414 VAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKL 448
Score = 96 (38.9 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 29/90 (32%), Positives = 48/90 (53%)
Query: 293 ILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVY--- 348
+L T+S AD T+ W L+ FS + T E + +++ ++ F G LL ++GL K++
Sbjct: 535 VLATAS-ADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIK 593
Query: 349 GWEPARQYDA-QPMGWG----KVQDLAVTG 373
E R DA + WG ++ D A+TG
Sbjct: 594 SNECVRTLDAHEDKVWGLHCSRLDDHAITG 623
Score = 82 (33.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNLA 88
+L + D + +W+L +C+ L+ H + V S+ F +G LS+G I +W+L
Sbjct: 167 LLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDKICI-VWDLR 225
Query: 89 VPTVQRTLNGHKSSITSVDF--HP---YG------DYLCSGSLDSFIKLWDLRRKGCIYT 137
RT+ +S SV P G +L +G +++W+ C+YT
Sbjct: 226 SYETSRTVPVFESVEASVLLPEEPALALGVKNSGLHFLTAGD-QGILRVWEAASGQCVYT 284
Score = 50 (22.7 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 280 SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG 339
SL++ P +L + S DRT W L + L+ + + + FS + L
Sbjct: 484 SLAVSPNDKLLA-----TGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLAT 538
Query: 340 GDTEG-LKVY 348
+G +K++
Sbjct: 539 ASADGTIKLW 548
Score = 40 (19.1 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 13/49 (26%), Positives = 16/49 (32%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL 345
SS D+ WDL + T S + E LG GL
Sbjct: 212 SSGRDKICIVWDLRSYETSRTVPVFESVEASVLLPEEPALALGVKNSGL 260
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 205 (77.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 44/150 (29%), Positives = 70/150 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H +N LA+ ++LATG D+ LWAL + + +GH + +VQF ++ L
Sbjct: 478 HDKDINSLAVSPND-KLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVL 536
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ G+IK+W L + +T GH +S+ V F G L S D +KLW ++
Sbjct: 537 ATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSNE 596
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGED 163
C+ T H + + S +GG D
Sbjct: 597 CVRTLDAHEDKVWGLHCSQLDDHAITGGSD 626
Score = 179 (68.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 46/170 (27%), Positives = 72/170 (42%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPV------------ 61
H SV + + L TG D V LW L ++ S + S PV
Sbjct: 420 HTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCHD 479
Query: 62 ---ESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSG 118
S+ ++ L+ G Q + K+W L + GH+ + +V F P L +
Sbjct: 480 KDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVLATA 539
Query: 119 SLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
S D IKLW L+ C+ T+ GH S+ + F G + S G DG++++
Sbjct: 540 SADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKL 589
Score = 153 (58.9 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 34/100 (34%), Positives = 49/100 (49%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEETLSAGCQSGSIKIWNL 87
QVLAT D + LWAL +C+ + GH V V F G + LS+G G +K+W +
Sbjct: 534 QVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSG-SDGLLKLWTI 592
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
RTL+ H+ + + D+ +G DS I LW
Sbjct: 593 KSNECVRTLDAHEDKVWGLHCSQLDDHAITGGSDSRIILW 632
Score = 139 (54.0 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 37/145 (25%), Positives = 65/145 (44%)
Query: 57 HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLC 116
H+ PV S+ F L+ G G++++W++ G + V FHP L
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLL 167
Query: 117 --SGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIG--ASF 172
S ++D+ I++W L+ + C+ H ++ S+ FS G + S G D + + S+
Sbjct: 168 LFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGRDKICIVWDLQSY 227
Query: 173 HLTNTS--IHVVDLSLVHPLGTPPP 195
T T V+ S++ P P P
Sbjct: 228 QTTRTVPVFESVEASVLLP-EQPAP 251
Score = 127 (49.8 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 39/141 (27%), Positives = 66/141 (46%)
Query: 46 GKSNCIMSLSGHSTPVESVQFGNGEET-LSAGCQSGSIKIWNL--AV----------PTV 92
G+ C+ SGH+ V ++ +E+ L G Q ++K+W L A+ P +
Sbjct: 409 GQVACVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALLAKSTAADSGPVL 468
Query: 93 ---QRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
Q T H I S+ P L +GS D KLW L + + + GH + + +++
Sbjct: 469 LQAQTTRRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQ 528
Query: 150 FSPDGQWIASGGEDGVVRIGA 170
FSP Q +A+ DG +++ A
Sbjct: 529 FSPTDQVLATASADGTIKLWA 549
Score = 109 (43.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 35/120 (29%), Positives = 53/120 (44%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET- 72
H A V +A S +LATGG D V +W + + G V V F + + T
Sbjct: 108 HTAPVASMAFDATS-TLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAF-HPDPTR 165
Query: 73 --LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
L + SI++W+L + L H S++TS+ F G + S D +WDL+
Sbjct: 166 LLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGRDKICIVWDLQ 225
Score = 104 (41.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 33/148 (22%), Positives = 65/148 (43%)
Query: 26 KSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQF-GNGEETLSAGCQSGSIKI 84
++ +L T D + L+ +G+S V V+F G + + S +K+
Sbjct: 302 RAADLLLTVTADHNLLLYEAHSLQLQKQFAGYSEEVLDVRFLGPSDSHIVVASNSPCLKV 361
Query: 85 WNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG---CIYTYRGH 141
+ L Q L+GH + ++D G S + D I++W + + G C+ GH
Sbjct: 362 FELQTLACQ-ILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWKMNKAGQVACVAQGSGH 420
Query: 142 SKSINSIRFSP-DGQWIASGGEDGVVRI 168
+ S+ +I S ++ +G +D V++
Sbjct: 421 THSVGTICCSRLKESFLVTGSQDCTVKL 448
Score = 96 (38.9 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 29/90 (32%), Positives = 48/90 (53%)
Query: 293 ILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGL-KVY--- 348
+L T+S AD T+ W L+ FS + T E + +++ ++ F G LL ++GL K++
Sbjct: 535 VLATAS-ADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIK 593
Query: 349 GWEPARQYDA-QPMGWG----KVQDLAVTG 373
E R DA + WG ++ D A+TG
Sbjct: 594 SNECVRTLDAHEDKVWGLHCSQLDDHAITG 623
Score = 85 (35.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 31/120 (25%), Positives = 53/120 (44%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET-LSAGCQSGSIKIWNLA 88
+L + D + +W+L +C+ L+ H + V S+ F G T LS+G I +W+L
Sbjct: 167 LLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGRDKICI-VWDLQ 225
Query: 89 VPTVQRTLNGHKSSITSVDF--HP---YG------DYLCSGSLDSFIKLWDLRRKGCIYT 137
RT+ +S SV P G +L +G +++W+ C+YT
Sbjct: 226 SYQTTRTVPVFESVEASVLLPEQPAPALGVKSSGLHFLTAGD-QGILRVWEAASGQCVYT 284
Score = 85 (35.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 38/142 (26%), Positives = 61/142 (42%)
Query: 77 CQSGS-IKIWNLAVPTVQRTLNGH-KSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC 134
C G+ + I ++A + R+L + ITS D P + L + S + W R
Sbjct: 41 CVCGTKVNILDVASGALLRSLEQEDQEDITSFDLSPDDEVLVTASRALLLAQWAWREGTV 100
Query: 135 IYTYRG-HSKSINSIRFSPDGQWIASGGEDGVVRIGA-----SFHLTNTSIHVVDLSLVH 188
++ H+ + S+ F +A+GG DG VR+ H S VV L H
Sbjct: 101 TRLWKAIHTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFH 160
Query: 189 PLGTPPPQYTSSVPFSHNTSLR 210
P T ++S+V +TS+R
Sbjct: 161 PDPTRLLLFSSAV----DTSIR 178
Score = 79 (32.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 30/152 (19%), Positives = 59/152 (38%)
Query: 22 ALG-KKSGQVLATGGDDKKVNLWALGKSNCIMS---LSGHSTPVESVQFGNGEETLSAGC 77
ALG K SG T GD + +W C+ + + G + + L
Sbjct: 252 ALGVKSSGLHFLTAGDQGILRVWEAASGQCVYTQPQMPGLRQELTHCTLARAADLLLTVT 311
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDF-HPYGDYLCSGSLDSFIKLWDLRRKGCIY 136
++ ++ +Q+ G+ + V F P ++ S +K+++L+ C
Sbjct: 312 ADHNLLLYEAHSLQLQKQFAGYSEEVLDVRFLGPSDSHIVVASNSPCLKVFELQTLACQI 371
Query: 137 TYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ GH+ + ++ G AS +D +RI
Sbjct: 372 LH-GHTDIVLALDVFRKGWLFASCAKDQSIRI 402
Score = 49 (22.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 280 SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLG 339
SL++ P +L + S DRT W L + L+ + + + FS + L
Sbjct: 484 SLAVSPNDKLLA-----TGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVLAT 538
Query: 340 GDTEG-LKVY 348
+G +K++
Sbjct: 539 ASADGTIKLW 548
Score = 47 (21.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 265 LNRSG--TCVPVSVSRT-SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKN 321
+N++G CV T S+ + S + L T S D TV W L + L +T +
Sbjct: 405 MNKAGQVACVAQGSGHTHSVGTICCSRLKESFLVTGSQ-DCTVKLWPLPEALLAKSTAAD 463
Query: 322 SSTI 325
S +
Sbjct: 464 SGPV 467
Score = 38 (18.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 10/55 (18%), Positives = 25/55 (45%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
SS +D + W ++ V T + + + L S+ + + G ++ ++ W+
Sbjct: 580 SSGSDGLLKLWTIKSNECVRTLDAHEDKVWGLHCSQLDDHAITGGSDS-RIILWK 633
Score = 37 (18.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNS 322
L S + D+++ W + K V+ + S
Sbjct: 390 LFASCAKDQSIRIWKMNKAGQVACVAQGS 418
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 203 (76.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 54/171 (31%), Positives = 86/171 (50%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
F H + L + G+ +A+G D+ V LW + ++ +++ V +V
Sbjct: 384 FAGHEQDIYSLDFAR-DGRTIASGSGDRTVRLWDI-ENGTALTVFTIEDGVTTVAISPDT 441
Query: 71 ETLSAGCQSGSIKIWNLAVPT-VQRTL--NGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ ++AG S+++W+L V+R +GHK S+ SV F P G L +GSLD IKLW
Sbjct: 442 KYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLW 501
Query: 128 DLRR----------KG--CIYTYRGHSKSINSIRFSPDGQWIASGGED-GV 165
+L KG C+ T+ GH + S+ +PD QW+ SG +D GV
Sbjct: 502 ELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGV 552
Score = 199 (75.1 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 40/145 (27%), Positives = 79/145 (54%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G+ LATG +DK++ +W + + +GH + S+ F T+++G ++++W++
Sbjct: 358 GKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDI 417
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC----IYTYRGHSK 143
T T+ + +T+V P Y+ +GSLD +++WDL + GC + GH
Sbjct: 418 ENGTAL-TVFTIEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQ-GCPVERLEGPDGHKD 475
Query: 144 SINSIRFSPDGQWIASGGEDGVVRI 168
S+ S+ FSP+G+ + +G D +++
Sbjct: 476 SVYSVAFSPNGRDLVTGSLDKTIKL 500
Score = 168 (64.2 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 51/162 (31%), Positives = 73/162 (45%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSG---HSTPVESVQFG-NGEETLSAGCQSGSIKIWN 86
+A G DK V +W L + + L G H V SV F NG + L G +IK+W
Sbjct: 444 VAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRD-LVTGSLDKTIKLWE 502
Query: 87 LAVP--TVQ----------RTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGC 134
LA P +Q +T GH+ + SV P ++ SGS D ++ WD R
Sbjct: 503 LATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGST 562
Query: 135 IYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN 176
+GH S+ S+ SP G + A+G D RI + + N
Sbjct: 563 QLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIWSYTRMDN 604
Score = 142 (55.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 65/280 (23%), Positives = 119/280 (42%)
Query: 57 HSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSIT------SVDFHP 110
H + V V+F + ++ GC S +I+++ L + T SV F P
Sbjct: 298 HESVVCCVRFSADGKYVATGCNR-SAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSP 356
Query: 111 YGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
G YL +G+ D I++WD+ + + GH + I S+ F+ DG+ IASG D VR+
Sbjct: 357 DGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWD 416
Query: 171 SFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRK-SFTKGRPGGTKAKIDVTR 229
+ T ++ ++ + +P +Y ++ S + S+R T+G P D +
Sbjct: 417 IENGTALTVFTIEDGVTTVAISPDTKYVAAG--SLDKSVRVWDLTQGCPVERLEGPDGHK 474
Query: 230 IEENAESEDQAGEEELFATIANPCDYSAIFQPHRSL----NRSGTCVPVSVSRTSLSI-L 284
+ + G + + ++ + P ++ ++ G CV + +
Sbjct: 475 DSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSV 534
Query: 285 PQSPMLCFILTTSSSADRTVNFWDLEKFS--LVSTTEKNS 322
+P +++ S S DR V FWD S L+ KNS
Sbjct: 535 ALTPDNQWVM--SGSKDRGVQFWDPRTGSTQLMLQGHKNS 572
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/139 (28%), Positives = 62/139 (44%)
Query: 5 VEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALG--KSN----------CIM 52
VE+ E H SV +A +G+ L TG DK + LW L + N C+
Sbjct: 464 VERLEGPDGHKDSVYSVAFSP-NGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVK 522
Query: 53 SLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYG 112
+ GH V SV + + +G + ++ W+ + Q L GHK+S+ SV P G
Sbjct: 523 TFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTG 582
Query: 113 DYLCSGSLDSFIKLWDLRR 131
+ +GS D ++W R
Sbjct: 583 GFFATGSGDMRARIWSYTR 601
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 190 (71.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 1 MRAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
+RA H +V +A +G+ LA+G D V W L + GH
Sbjct: 51 VRAVTRCTSSLEGHSEAVISVAFSP-TGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHW 109
Query: 61 VESVQFGNGEETLSAGCQSGSIKIWNLAV-PTVQRTLNGHKSSITSVDFHP-YGD----Y 114
V S+ + +TL++GC++G I +W+ + V R L GH IT + + P + + Y
Sbjct: 110 VLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRY 169
Query: 115 LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ S S D +++WD C GH++S+ +R+ DG + S +D +++
Sbjct: 170 MASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKV 222
Score = 186 (70.5 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 39/139 (28%), Positives = 73/139 (52%)
Query: 31 LATGGDDKKVNLWALGKSNCIMS-LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
L +G DD + +W+ + ++ ++GH + V F +++ SIK+W+
Sbjct: 295 LVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 354
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+L GH +++ + + L SGS DS +K+WD++ + GH+ + ++
Sbjct: 355 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVD 414
Query: 150 FSPDGQWIASGGEDGVVRI 168
+SPDGQ +ASGG+D +RI
Sbjct: 415 WSPDGQRVASGGKDKCLRI 433
Score = 149 (57.5 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 44/159 (27%), Positives = 73/159 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGG-DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
HG VN +AL + L TG + + ++ A + L + ++ G G E
Sbjct: 237 HGHWVNTMALS--TDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPER 294
Query: 73 LSAGCQSGSIKIWNLAV---PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
L +G ++ +W+ A P + T GH++ I V F P + S S D IKLWD
Sbjct: 295 LVSGSDDFTLFMWSPAEDKKPLARMT--GHQALINQVLFSPDSRIIASASFDKSIKLWDG 352
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
R + + RGH ++ I +S D + + SG D +++
Sbjct: 353 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKV 391
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H A +N + S +++A+ DK + LW + SL GH V + + L
Sbjct: 322 HQALINQVLFSPDS-RIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 380
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+G ++K+W++ + L GH + +VD+ P G + SG D +++W
Sbjct: 381 VSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 125 (49.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 37/133 (27%), Positives = 65/133 (48%)
Query: 28 GQVLATGGDDKKVNLW--ALGKSNCIMSLSGHSTPVESVQF----GNGE-ETLSAGCQSG 80
G+ LA+G + ++ LW + GK + L+GHS + + + N E +++ + G
Sbjct: 119 GKTLASGCKNGQILLWDPSTGKQVGRV-LAGHSKWITGLSWEPLHANPECRYMASSSKDG 177
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
S+++W+ +R L GH S+T + + G L S S D IK+W T +G
Sbjct: 178 SVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQG 236
Query: 141 HSKSINSIRFSPD 153
H +N++ S D
Sbjct: 237 HGHWVNTMALSTD 249
Score = 56 (24.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
L S S+D T+ WD++ L + ++ + + +S G+ + GG + L+++
Sbjct: 379 LLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 55 (24.4 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 13/63 (20%), Positives = 31/63 (49%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEP 352
+ S+S D+++ WD +++ + + + ++ +S L+ G ++ LKV W+
Sbjct: 337 IIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKV--WDV 394
Query: 353 ARQ 355
Q
Sbjct: 395 KAQ 397
Score = 41 (19.5 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS 331
L S+S DRT+ W L T + + + + S
Sbjct: 210 LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS 247
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 197 (74.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 44/151 (29%), Positives = 73/151 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFG-NGEET 72
H V C A G+++ + +DK + +W C+ + S V F +G
Sbjct: 13 HTHWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCI 71
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRK 132
SAG ++K+W++ V + + H + + FHP G+YL + S D +K+ DL
Sbjct: 72 ASAGSDQ-TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEG 130
Query: 133 GCIYTYRGHSKSINSIRFSPDGQWIASGGED 163
IYT +GH+ + ++ FS G+ ASGG D
Sbjct: 131 RLIYTLQGHTGPVFTVSFSKGGELFASGGAD 161
Score = 147 (56.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 34/121 (28%), Positives = 59/121 (48%)
Query: 51 IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSI---TSVD 107
+ SL H+ V +F + + + +IKIW+ T ++ +N S+ VD
Sbjct: 7 LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT---TNKQCVNNFSDSVGFANFVD 63
Query: 108 FHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
F+P G + S D +K+WD+R + Y+ HS +N I F P G ++ + DG ++
Sbjct: 64 FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLK 123
Query: 168 I 168
I
Sbjct: 124 I 124
Score = 123 (48.4 bits), Expect = 0.00024, P = 0.00024
Identities = 28/101 (27%), Positives = 45/101 (44%)
Query: 27 SGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
SG +A+ G D+ V +W + + + HS V + F L G++KI +
Sbjct: 67 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 126
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
L + TL GH + +V F G+ SG D+ + LW
Sbjct: 127 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 167
Score = 67 (28.6 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 292 FILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGG--DTEGL 345
+++T SS D T+ DL + L+ T + ++ + ++FS+GGE G DT+ L
Sbjct: 112 YLITASS--DGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 165
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 182 (69.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 45/157 (28%), Positives = 74/157 (47%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
AH + SG L TGG D+ V +W I SL G + + + ++
Sbjct: 223 AHEGGCGSIVFEYNSG-TLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKS 281
Query: 73 LSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD-YLCSGSLDSFIKLWDLRR 131
+ A S ++ +W+++ V+ TL GH + +VD + ++ S + D IKLWDL +
Sbjct: 282 VIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHK 341
Query: 132 KGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
C T + + N+I S DG + SG DG +R+
Sbjct: 342 GYCTNTVL-FTSNCNAICLSIDGLTVFSGHMDGNLRL 377
Score = 134 (52.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 38/159 (23%), Positives = 73/159 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V + + K S + + + D+ + LW L K C ++ S ++ T+
Sbjct: 308 HTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSN-CNAICLSIDGLTV 366
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+G G++++W++ + + GH S++TSV G+ + + D+ ++D R
Sbjct: 367 FSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLE 426
Query: 134 CIYTYR--GHSKSINSIR--FSPDGQWIASGGEDGVVRI 168
T R G+ + N R SPD ++A+G DG V +
Sbjct: 427 ICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHV 465
Score = 110 (43.8 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 35/130 (26%), Positives = 61/130 (46%)
Query: 42 LWALGKSNCIMSLSGHSTPVESVQFG--NGEETLSAGCQSGSIKIWNL----AVPTVQRT 95
+W + +L+GH+ V +V + +SA +IK+W+L TV T
Sbjct: 293 VWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDR-TIKLWDLHKGYCTNTVLFT 351
Query: 96 LNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQ 155
N + + S+D G + SG +D ++LWD++ + GHS ++ S+ S +G
Sbjct: 352 SNCNAICL-SID----GLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGN 406
Query: 156 WIASGGEDGV 165
I + G D V
Sbjct: 407 RILTSGRDNV 416
Score = 67 (28.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350
+ SAD +V+ W L K ++VS ++ +S I ++S G+ L D G V W
Sbjct: 456 AGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASADKNGY-VCTW 508
Score = 54 (24.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL 338
S D + WD++ L+S +SS + ++ S G +L
Sbjct: 368 SGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRIL 409
>TAIR|locus:2037798 [details] [associations]
symbol:PWP2 "AT1G15440" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0080008 HSSP:Q04724
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:AY065425
EMBL:AY133789 IPI:IPI00543736 RefSeq:NP_172998.1 UniGene:At.28488
ProteinModelPortal:Q8VYZ5 SMR:Q8VYZ5 STRING:Q8VYZ5 PaxDb:Q8VYZ5
PRIDE:Q8VYZ5 EnsemblPlants:AT1G15440.1 GeneID:838115
KEGG:ath:AT1G15440 TAIR:At1g15440 InParanoid:Q8VYZ5
PhylomeDB:Q8VYZ5 ProtClustDB:CLSN2679476 ArrayExpress:Q8VYZ5
Genevestigator:Q8VYZ5 Uniprot:Q8VYZ5
Length = 900
Score = 193 (73.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 48/158 (30%), Positives = 77/158 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H VNC+ S Q+LATG DD KV +W + C ++ + H+ V ++ F +L
Sbjct: 388 HYFDVNCVTYSPDS-QLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 446
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKS-SITSVDFHPYGDYLCSGSLDSF-IKLWDLRR 131
+ G+++ W+ +T S+ P GD +C+G+LDSF I +W ++
Sbjct: 447 LSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWS-KK 505
Query: 132 KGCIYTY-RGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
G I GH ++ + FSP Q +AS D VR+
Sbjct: 506 TGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRL 543
Score = 138 (53.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 36/154 (23%), Positives = 63/154 (40%)
Query: 16 ASVNCLALGKKSG-QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLS 74
AS A G ++ G + L+ + CI LS + + F L+
Sbjct: 303 ASAKVTACDYHQGLDMVVVGFSNGVFGLYQMPDFICIHLLSISRQKLTTAVFNERGNWLT 362
Query: 75 AGCQS-GSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
GC G + +W+ T GH + V + P L +G+ D+ +K+W++
Sbjct: 363 FGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGT 422
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
C T+ H+ ++ ++ F D + S DG VR
Sbjct: 423 CFITFTEHTNAVTALHFMADNHSLLSASLDGTVR 456
Score = 138 (53.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/100 (29%), Positives = 53/100 (53%)
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+G+ + S I +W+ ++ L+GH++ + + F P L S S D ++LW
Sbjct: 485 SGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLW 544
Query: 128 DL-RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
D+ KG + T+R H+ + ++ F PDG+ +AS DG +
Sbjct: 545 DVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQI 583
Score = 133 (51.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 31/123 (25%), Positives = 52/123 (42%)
Query: 42 LWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKS 101
+W I+ GH V V + + L+ G +K+WN+ T T H +
Sbjct: 373 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTN 432
Query: 102 SITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHS-KSINSIRFSPDGQWIASG 160
++T++ F L S SLD ++ WD +R TY + + S+ P G + +G
Sbjct: 433 AVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAG 492
Query: 161 GED 163
D
Sbjct: 493 TLD 495
Score = 123 (48.4 bits), Expect = 0.00099, P = 0.00099
Identities = 33/117 (28%), Positives = 53/117 (45%)
Query: 27 SGQVLATGG-DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIW 85
SG V+ G D ++ +W+ LSGH PV + F + L++ ++++W
Sbjct: 485 SGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLW 544
Query: 86 NLAVP--TVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
++ TV+ T H + +V F P G L S +LD I WD +YT G
Sbjct: 545 DVFASKGTVE-TFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 599
Score = 111 (44.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 30/128 (23%), Positives = 58/128 (45%)
Query: 43 WAL-GKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKS 101
W L K C + S V + + G + + G +G ++ + L+ +
Sbjct: 292 WVLLRKDGCNQA----SAKVTACDYHQGLDMVVVGFSNGVFGLYQMPDFICIHLLSISRQ 347
Query: 102 SITSVDFHPYGDYLCSGSLD-SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASG 160
+T+ F+ G++L G + +WD R + I +GH +N + +SPD Q +A+G
Sbjct: 348 KLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATG 407
Query: 161 GEDGVVRI 168
+D V++
Sbjct: 408 ADDNKVKV 415
Score = 65 (27.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 20/84 (23%), Positives = 33/84 (39%)
Query: 268 SGTCVPVSVSRTSLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLVST-TEKNSSTIR 326
SGTC T+ ++ M S+S D TV WD +++ T T
Sbjct: 420 SGTCFITFTEHTN-AVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFV 478
Query: 327 RLTFSEGGECLLGGDTEGLKVYGW 350
LT G+ + G + +++ W
Sbjct: 479 SLTADPSGDVVCAGTLDSFEIFVW 502
Score = 63 (27.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 33/120 (27%), Positives = 52/120 (43%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTE--KNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
L SSS D TV WD+ F+ T E +++ + + F G+ L +G ++ W+
Sbjct: 531 LLASSSWDYTVRLWDV--FASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDG-QINFWD 587
Query: 352 PARQYDAQPMGWGKVQDLAVTGTQLWFRRVGTWSHQDSGFSTLDSYSA-GSPVSTMGRER 410
+ G+ +D+A G + RR S F+TL YSA G + G R
Sbjct: 588 TIEGVLMYTIE-GR-RDIA-GGRVMTDRRSAANSSSGKCFTTL-CYSADGGYILAAGTSR 643
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 189 (71.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 55/181 (30%), Positives = 80/181 (44%)
Query: 15 GASVNCLALGKKSGQVLATGGDDKKVNL-------------WALGKSNCIMSLSGHSTPV 61
GAS AL ++ G+ GDDK +L W + +SGH V
Sbjct: 91 GAST---ALVRRGGRASGAAGDDKPTSLIQRPSATRQQPPEWH-APWKLMRVISGHLGWV 146
Query: 62 ESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD 121
S+ E ++G +IKIWNLA ++ TL GH S++ + P YL S D
Sbjct: 147 RSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYLFSCGED 206
Query: 122 SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHV 181
+K WDL I Y GH + ++ P + +GG DGV R+ T ++IHV
Sbjct: 207 KMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDM--RTRSNIHV 264
Query: 182 V 182
+
Sbjct: 265 L 265
Score = 172 (65.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 38/155 (24%), Positives = 73/155 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V LA+ + + + A+G D+ + +W L ++L+GH + V + L
Sbjct: 142 HLGWVRSLAV-EPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYL 200
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + +K W+L V R +GH S + ++ HP D L +G D ++WD+R +
Sbjct: 201 FSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRS 260
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
I+ GH+ ++ ++ + +G D VR+
Sbjct: 261 NIHVLSGHTGTVADVQCQEADPQVITGSLDATVRL 295
Score = 166 (63.5 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 45/154 (29%), Positives = 70/154 (45%)
Query: 11 FMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGE 70
+ H + V LAL + +L TGG D +W + + I LSGH+ V VQ +
Sbjct: 223 YHGHLSGVYTLALHPRL-DLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEAD 281
Query: 71 ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+ G ++++W+LA L HK I S+ HP S S S IK W
Sbjct: 282 PQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHPREFTFASASTGS-IKQWKCP 340
Query: 131 RKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDG 164
+ + GH+ IN++ + D + SGG++G
Sbjct: 341 GGEFMQNFEGHNAIINTLSVNEDNV-LFSGGDNG 373
Score = 143 (55.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 35/139 (25%), Positives = 63/139 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++V LA+ + + + G +DK V W L + I GH + V ++ + L
Sbjct: 184 HISTVRGLAVSPRHPYLFSCG-EDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLL 242
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
G + G ++W++ + L+GH ++ V + +GSLD+ ++LWDL
Sbjct: 243 VTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGK 302
Query: 134 CIYTYRGHSKSINSIRFSP 152
+ H K I S+ P
Sbjct: 303 TMGVLTHHKKGIRSLATHP 321
Score = 57 (25.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 12/62 (19%), Positives = 27/62 (43%)
Query: 295 TTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPAR 354
T +S++ ++ W + E +++ I L+ +E GGD + + W+
Sbjct: 325 TFASASTGSIKQWKCPGGEFMQNFEGHNAIINTLSVNEDNVLFSGGDNGSMSFWDWKTGY 384
Query: 355 QY 356
+Y
Sbjct: 385 RY 386
Score = 42 (19.8 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRL 328
+ S D TV WDL + + IR L
Sbjct: 286 TGSLDATVRLWDLAAGKTMGVLTHHKKGIRSL 317
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 172 (65.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 48/172 (27%), Positives = 76/172 (44%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWAL--GKSNC-IMSLSGHSTP 60
K+ K D H V +A SG +LA+ G DK + LW L G C + L GH
Sbjct: 2 KMSKLSDLEGHEDRVWNVAWNP-SGTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRT 60
Query: 61 VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQR--TLNGHKSSITSVDFHPYGDYLCSG 118
V V + N L++ G+ IW T + TL GH++ + + + P G +L +
Sbjct: 61 VRGVSWSNCGRYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKACGWSPSGRFLATC 120
Query: 119 SLDSFIKLWDLRRKG---CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVR 167
S D + +W++ C HS+ + + + PD +AS D +R
Sbjct: 121 SRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDRDELASASYDNTIR 172
Score = 135 (52.6 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 38/130 (29%), Positives = 63/130 (48%)
Query: 50 CIMSLSGHSTPVESVQFGNGEETLSAGCQS-GSIKIWNLAVPT----VQRTLNGHKSSIT 104
C +L H++ V + FG G E A C + GS+ +W + TL H +
Sbjct: 183 CYCTLDKHASTVWGLSFGPGPEPQLASCAADGSVYVWGTKGDRRSWELCGTLERHPRPVY 242
Query: 105 SVDFHPYGDYLCSGSLDSFIKLW-----DLR-RKGCIYTYRGHSKSINSIRFSPDGQWIA 158
V + +L + D+ ++++ D R GC T + HS+ +NS+ +SP G +A
Sbjct: 243 DVSWCRTRGFLATACGDNAVRVFVKDGGDCSWRLGCTLT-QAHSQDVNSVSWSPSGGLLA 301
Query: 159 SGGEDGVVRI 168
S G+DG VR+
Sbjct: 302 SAGDDGYVRL 311
Score = 124 (48.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 38/129 (29%), Positives = 62/129 (48%)
Query: 47 KSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSG-SIKIWNLAVPT-VQRT--LNGHKSS 102
K + + L GH V +V + N T+ A C SI++W L + V ++ L+GH+ +
Sbjct: 2 KMSKLSDLEGHEDRVWNVAW-NPSGTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRT 60
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLW---DLRRKGCIYTYRGHSKSINSIRFSPDGQWIAS 159
+ V + G YL S S D +W D + C T GH + + +SP G+++A+
Sbjct: 61 VRGVSWSNCGRYLASSSFDGTTCIWRRQDDTFESCA-TLEGHENEVKACGWSPSGRFLAT 119
Query: 160 GGEDGVVRI 168
D V I
Sbjct: 120 CSRDKTVWI 128
Score = 67 (28.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 297 SSSADRTVNFW--DLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGW 350
S+S D T+ F+ +++ + T +K++ST+ L+F G E L VY W
Sbjct: 164 SASYDNTIRFFCEEVDDWQCYCTLDKHASTVWGLSFGPGPEPQLASCAADGSVYVW 219
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 180 (68.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 46/159 (28%), Positives = 77/159 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H SV CL ++ V+ TG D V +W + + +L H V ++F NG +
Sbjct: 243 HTGSVLCLQYDER---VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG---M 296
Query: 74 SAGCQSG-SIKIWNLAVPT---VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
C SI +W++A PT ++R L GH++++ VDF Y+ S S D IK+W+
Sbjct: 297 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNT 354
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH + I +++ + + SG D +R+
Sbjct: 355 STCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 391
Score = 178 (67.7 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 46/143 (32%), Positives = 70/143 (48%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMS---LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
++ T D+ + +W + I L GH V V F + ++G ++ IK+WN
Sbjct: 296 MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRT--IKVWN 353
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLC-SGSLDSFIKLWDLRRKGCIYTYRGHSKSI 145
+ RTLNGHK I + Y D L SGS D+ I+LWD+ C+ GH + +
Sbjct: 354 TSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 410
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
IRF D + I SG DG +++
Sbjct: 411 RCIRF--DNKRIVSGAYDGKIKV 431
Score = 130 (50.8 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 37/164 (22%), Positives = 76/164 (46%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H A+VN + K +++ GD + + +W + +L+GH + +Q+ +
Sbjct: 324 VGHRAAVNVVDFDDK--YIVSASGD-RTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DR 378
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL-- 129
+ +G +I++W++ R L GH+ + + F + SG+ D IK+WDL
Sbjct: 379 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLIA 436
Query: 130 ----RRKG---CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
R C+ T HS + ++F + Q ++S +D ++
Sbjct: 437 ALDPRAPAGTLCLRTLVEHSGRVFRLQFD-EFQIVSSSHDDTIL 479
Score = 119 (46.9 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 32/143 (22%), Positives = 64/143 (44%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88
Q + +G D + +W C L+GH+ V +Q+ E + G ++++W++
Sbjct: 215 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVN 272
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR---GHSKSI 145
+ TL H ++ + F+ + + S D I +WD+ I R GH ++
Sbjct: 273 TGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAV 330
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
N + F D ++I S D +++
Sbjct: 331 NVVDF--DDKYIVSASGDRTIKV 351
Score = 105 (42.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 27/111 (24%), Positives = 55/111 (49%)
Query: 43 WALGKSNC--IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK 100
W G+ + I S S V +Q+ ++ + +G + +IKIW+ + +R L GH
Sbjct: 187 WRCGRHSLQRIHCRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKSTLECKRILTGHT 244
Query: 101 SSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151
S+ + + + +GS DS +++WD+ + T H +++ +RF+
Sbjct: 245 GSVLCLQYDER--VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 293
Score = 68 (29.0 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S+D T+ WD+E + + E + +R + F + ++ G +G K+ W+
Sbjct: 379 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN--KRIVSGAYDG-KIKVWDLI 435
Query: 354 RQYDAQ-PMG 362
D + P G
Sbjct: 436 AALDPRAPAG 445
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 180 (68.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 46/159 (28%), Positives = 77/159 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H SV CL ++ V+ TG D V +W + + +L H V ++F NG +
Sbjct: 243 HTGSVLCLQYDER---VIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG---M 296
Query: 74 SAGCQSG-SIKIWNLAVPT---VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
C SI +W++A PT ++R L GH++++ VDF Y+ S S D IK+W+
Sbjct: 297 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNT 354
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH + I +++ + + SG D +R+
Sbjct: 355 STCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 391
Score = 178 (67.7 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 46/143 (32%), Positives = 70/143 (48%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMS---LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
++ T D+ + +W + I L GH V V F + ++G ++ IK+WN
Sbjct: 296 MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRT--IKVWN 353
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLC-SGSLDSFIKLWDLRRKGCIYTYRGHSKSI 145
+ RTLNGHK I + Y D L SGS D+ I+LWD+ C+ GH + +
Sbjct: 354 TSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 410
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
IRF D + I SG DG +++
Sbjct: 411 RCIRF--DNKRIVSGAYDGKIKV 431
Score = 130 (50.8 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 37/164 (22%), Positives = 76/164 (46%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H A+VN + K +++ GD + + +W + +L+GH + +Q+ +
Sbjct: 324 VGHRAAVNVVDFDDK--YIVSASGD-RTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DR 378
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
+ +G +I++W++ R L GH+ + + F + SG+ D IK+WDL
Sbjct: 379 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLMA 436
Query: 132 K-------G--CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
G C+ T HS + ++F + Q ++S +D ++
Sbjct: 437 ALDPRAPAGTLCLRTLVEHSGRVFRLQFD-EFQIVSSSHDDTIL 479
Score = 119 (46.9 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 32/143 (22%), Positives = 64/143 (44%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88
Q + +G D + +W C L+GH+ V +Q+ E + G ++++W++
Sbjct: 215 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVN 272
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR---GHSKSI 145
+ TL H ++ + F+ + + S D I +WD+ I R GH ++
Sbjct: 273 AGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAV 330
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
N + F D ++I S D +++
Sbjct: 331 NVVDF--DDKYIVSASGDRTIKV 351
Score = 105 (42.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 27/111 (24%), Positives = 55/111 (49%)
Query: 43 WALGKSNC--IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK 100
W G+ + I S S V +Q+ ++ + +G + +IKIW+ + +R L GH
Sbjct: 187 WRCGRHSLQRIHCRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKSTLECKRILTGHT 244
Query: 101 SSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151
S+ + + + +GS DS +++WD+ + T H +++ +RF+
Sbjct: 245 GSVLCLQYDER--VIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN 293
Score = 68 (29.0 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S+D T+ WD+E + + E + +R + F + ++ G +G K+ W+
Sbjct: 379 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN--KRIVSGAYDG-KIKVWDLM 435
Query: 354 RQYDAQ-PMG 362
D + P G
Sbjct: 436 AALDPRAPAG 445
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 192 (72.6 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 68/229 (29%), Positives = 100/229 (43%)
Query: 4 KVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN---CIMSLSGHSTP 60
++E H + V C+A SG ++AT G DK V LW C+ L HS
Sbjct: 97 EMEALVSLEGHTSEVKCVAWCP-SGHLIATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQD 155
Query: 61 VESVQFGNGEETLSAGCQSGSIKIWNLAVP--TVQRTLNGHKSSITSVDFHPYGDYLCSG 118
V+SV + E L + I ++ + TV L+GH S++ +F P GD L S
Sbjct: 156 VKSVAWHPHGEVLVSTSYDNKINVYREELDDWTVFAQLSGHDSTVWKAEFSPSGDILASC 215
Query: 119 SLDSFIKLWDLRR---KG----CIYTYRG-HSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
S D +KLW K CI T G H+++I + +SPD Q +AS G D R+
Sbjct: 216 SDDLCVKLWSWEGVCGKSSSWMCIATLSGYHTRTIFDLNWSPDSQLLASCGSDN--RLCI 273
Query: 171 SFHLTNTSIHVVDLSLVHPLGTPPPQYTSSVPFSHNTSLRKSFTKGRPG 219
N H+ P PP VP +H+ + + + +PG
Sbjct: 274 YKMPANGLTHIGG----KPCFEEPPVLWGHVPNAHSEDV--NCVRWKPG 316
Score = 125 (49.1 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 34/154 (22%), Positives = 67/154 (43%)
Query: 28 GQVLATGGDDKKVNLWALGKSNC---IMSL-SGHSTPVESVQFGNGEETLSAGCQSGSIK 83
G VL + G+D+ + LWA SL H + V + +++ G++
Sbjct: 26 GSVLISSGEDRVIKLWAKCNDQLWGSSFSLPEAHKKSIRCVTWSPCGTYIASASFDGTVT 85
Query: 84 IWNLA----VPTVQR--TLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG---C 134
IW ++ P ++ +L GH S + V + P G + + D + LW+ + C
Sbjct: 86 IWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPSGHLIATCGRDKSVWLWEFDDEEDVQC 145
Query: 135 IYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ + HS+ + S+ + P G+ + S D + +
Sbjct: 146 VSVLQPHSQDVKSVAWHPHGEVLVSTSYDNKINV 179
Score = 47 (21.6 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 291 CFILTTSSSADRTVNFWDLE 310
C + T++S D + FW +E
Sbjct: 330 CHLFLTTASDDGYIKFWSIE 349
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 182 (69.1 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 47/159 (29%), Positives = 77/159 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H SV CL ++ V+ TG D V +W + + +L H+ V ++F NG L
Sbjct: 264 HTGSVLCLQYDER---VIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNG---L 317
Query: 74 SAGCQSG-SIKIWNLAVPT---VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
C SI +W++A PT ++R L GH++++ VDF Y+ S S D IK+W
Sbjct: 318 MVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWST 375
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH + I +++ + + SG D +R+
Sbjct: 376 STCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 412
Score = 173 (66.0 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 45/143 (31%), Positives = 70/143 (48%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMS---LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
++ T D+ + +W + I L GH V V F + ++G ++ IK+W+
Sbjct: 317 LMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRT--IKVWS 374
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLC-SGSLDSFIKLWDLRRKGCIYTYRGHSKSI 145
+ RTLNGHK I + Y D L SGS D+ I+LWD+ C+ GH + +
Sbjct: 375 TSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 431
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
IRF D + I SG DG +++
Sbjct: 432 RCIRF--DNKRIVSGAYDGKIKV 452
Score = 134 (52.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 38/164 (23%), Positives = 78/164 (47%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H A+VN + K +++ GD + + +W+ + +L+GH + +Q+ +
Sbjct: 345 VGHRAAVNVVDFDDK--YIVSASGD-RTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DR 399
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR- 130
+ +G +I++W++ R L GH+ + + F + SG+ D IK+WDL+
Sbjct: 400 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLQA 457
Query: 131 ----RKG----CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
R C+ T HS + ++F + Q I+S +D ++
Sbjct: 458 ALDPRAPASTLCLRTLVEHSGRVFRLQFD-EFQIISSSHDDTIL 500
Score = 121 (47.7 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 36/170 (21%), Positives = 74/170 (43%)
Query: 2 RAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPV 61
R +++ + + V CL + + + +G D + +W C+ L+GH+ V
Sbjct: 212 RHNLQRIQCRSENSKGVYCL---QYDDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSV 268
Query: 62 ESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD 121
+Q+ E + G ++++W++ V TL H ++ + F + + S D
Sbjct: 269 LCLQYD--ERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRF--CNGLMVTCSKD 324
Query: 122 SFIKLWDLRRKGCIYTYR---GHSKSINSIRFSPDGQWIASGGEDGVVRI 168
I +WD+ I R GH ++N + F D ++I S D +++
Sbjct: 325 RSIAVWDMASPTDISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV 372
Score = 114 (45.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 29/110 (26%), Positives = 54/110 (49%)
Query: 43 WALGKSNC--IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK 100
W G+ N I S +S V +Q+ +E + +G + SIKIW+ + L GH
Sbjct: 208 WRCGRHNLQRIQCRSENSKGVYCLQYD--DEKIISGLRDNSIKIWDKQTLECLKILTGHT 265
Query: 101 SSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRF 150
S+ + + + +GS DS +++WD+ + T H++++ +RF
Sbjct: 266 GSVLCLQYDER--VIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRF 313
Score = 66 (28.3 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
L S S+D T+ WD+E + + E + +R + F + ++ G +G K+ W+
Sbjct: 400 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN--KRIVSGAYDG-KIKVWD 454
Score = 45 (20.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTF 330
SSS D T+ WD S TE S + R T+
Sbjct: 492 SSSHDDTILIWDFLNVSTNGQTEGRSPS-RTYTY 524
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 192 (72.6 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 47/174 (27%), Positives = 83/174 (47%)
Query: 1 MRAKVEKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTP 60
+RA H +V +A +G+ LA+G D V W L + GH
Sbjct: 101 VRAVTRCTSSLEGHSEAVISVAFSP-TGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHW 159
Query: 61 VESVQFGNGEETLSAGCQSGSIKIWNLAV-PTVQRTLNGHKSSITSVDFHP-YGD----Y 114
V S+ + + L++GC++G I +W+ + V R L GH IT++ + P + + Y
Sbjct: 160 VLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRY 219
Query: 115 LCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ S S D +++WD C T GH++S+ +R+ DG + S +D +++
Sbjct: 220 VASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGL-LYSASQDRTIKV 272
Score = 188 (71.2 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 40/139 (28%), Positives = 73/139 (52%)
Query: 31 LATGGDDKKVNLWALGKSNCIMS-LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
L +G DD + LW+ + ++ ++GH + V F +++ SIK+W+
Sbjct: 345 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRT 404
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
+L GH +++ + + L SGS DS +K+WD++ + GH+ + ++
Sbjct: 405 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVD 464
Query: 150 FSPDGQWIASGGEDGVVRI 168
+SPDGQ +ASGG+D +RI
Sbjct: 465 WSPDGQRVASGGKDKCLRI 483
Score = 149 (57.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 44/159 (27%), Positives = 73/159 (45%)
Query: 14 HGASVNCLALGKKSGQVLATGG-DDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEET 72
HG VN +AL + L TG + + ++ A + L + ++ G G E
Sbjct: 287 HGHWVNTMALS--TDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPER 344
Query: 73 LSAGCQSGSIKIWNLAV---PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
L +G ++ +W+ A P + T GH++ I V F P + S S D IKLWD
Sbjct: 345 LVSGSDDFTLFLWSPAEDKKPLARMT--GHQALINQVVFSPDSRVIASASFDKSIKLWDG 402
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
R + + RGH ++ I +S D + + SG D +++
Sbjct: 403 RTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKV 441
Score = 148 (57.2 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 30/114 (26%), Positives = 53/114 (46%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H A +N + S +V+A+ DK + LW + SL GH V + + L
Sbjct: 372 HQALINQVVFSPDS-RVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 430
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+G ++K+W++ + L GH + +VD+ P G + SG D +++W
Sbjct: 431 VSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 132 (51.5 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 28 GQVLATGGDDKKVNLW--ALGKSNCIMSLSGHSTPVESVQF----GNGE-ETLSAGCQSG 80
G+ LA+G + ++ LW + GK +L+GHS + ++ + N E +++ + G
Sbjct: 169 GKKLASGCKNGQILLWDPSTGKQ-VGRALTGHSKWITALSWEPLHANPECRYVASSSKDG 227
Query: 81 SIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRG 140
S+++W+ +RTL GH S+T + + G L S S D IK+W T +G
Sbjct: 228 SVRVWDTTAGRCERTLTGHAQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQG 286
Query: 141 HSKSINSIRFSPD 153
H +N++ S D
Sbjct: 287 HGHWVNTMALSTD 299
Score = 54 (24.1 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLL-GGDTEGLKVY 348
L S S+D T+ WD++ L + ++ + + +S G+ + GG + L+++
Sbjct: 429 LLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 54 (24.1 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 13/60 (21%), Positives = 30/60 (50%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVYGWEPARQ 355
S+S D+++ WD +++ + + + ++ +S L+ G ++ LKV W+ Q
Sbjct: 390 SASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKV--WDVKAQ 447
Score = 41 (19.5 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFS 331
L S+S DRT+ W L T + + + + S
Sbjct: 260 LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS 297
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 192 (72.6 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 41/155 (26%), Positives = 74/155 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V +A+ K S + ATG D + +W L ++L+GH + + ++ + L
Sbjct: 206 HTGWVRAIAVDK-SNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHPYL 264
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+ + + W+L R GH+ + SV HP D L SG D+ +++WD+R +
Sbjct: 265 FSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRA 324
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
I+ +GH +I S++ + SG D V++
Sbjct: 325 NIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKL 359
Score = 175 (66.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQ 65
++ ++ H V +AL + VL +GG D V +W + I + GH + S++
Sbjct: 282 KQVRNYYGHRQGVYSVAL-HPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLK 340
Query: 66 FGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIK 125
N + + +G ++K+W+LA T TL HK + S+ H +G+ D+ IK
Sbjct: 341 SQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKKGVRSMVIHEKEYSFATGAADN-IK 399
Query: 126 LWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
W I GH+ IN++ + D + SGG++G +
Sbjct: 400 QWKCPDGSFIKNLSGHNSIINAMALNADNV-LVSGGDNGSI 439
Score = 163 (62.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 35/115 (30%), Positives = 56/115 (48%)
Query: 54 LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGD 113
+SGH+ V ++ E + G +IK+W+LA ++ TL GH S+I ++
Sbjct: 203 ISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHP 262
Query: 114 YLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
YL S D+ + WDL + Y GH + + S+ P + SGG D VR+
Sbjct: 263 YLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRV 317
Score = 152 (58.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 37/152 (24%), Positives = 67/152 (44%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H +++ L + + + + G +D KV W L + + + GH V SV + L
Sbjct: 248 HVSAIRGLEVSSRHPYLFSVG-EDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVL 306
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
+G + +++W++ + GHK +I S+ + SGS+D+ +KLWDL
Sbjct: 307 FSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGT 366
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGV 165
T H K + S+ A+G D +
Sbjct: 367 SAATLTNHKKGVRSMVIHEKEYSFATGAADNI 398
Score = 55 (24.4 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 13/50 (26%), Positives = 20/50 (40%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLK 346
S S D TV WDL + +T + +R + E G + +K
Sbjct: 350 SGSMDTTVKLWDLATGTSAATLTNHKKGVRSMVIHEKEYSFATGAADNIK 399
Score = 46 (21.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 10/55 (18%), Positives = 22/55 (40%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWE 351
+ +AD + W S + ++S I + + + GGD + + W+
Sbjct: 392 TGAADN-IKQWKCPDGSFIKNLSGHNSIINAMALNADNVLVSGGDNGSISFWDWK 445
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 180 (68.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 46/159 (28%), Positives = 77/159 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H SV CL ++ V+ TG D V +W + + +L H V ++F NG +
Sbjct: 301 HTGSVLCLQYDER---VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG---M 354
Query: 74 SAGCQSG-SIKIWNLAVPT---VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
C SI +W++A PT ++R L GH++++ VDF Y+ S S D IK+W+
Sbjct: 355 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNT 412
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH + I +++ + + SG D +R+
Sbjct: 413 STCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 449
Score = 178 (67.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 46/143 (32%), Positives = 70/143 (48%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMS---LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
++ T D+ + +W + I L GH V V F + ++G ++ IK+WN
Sbjct: 354 MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRT--IKVWN 411
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLC-SGSLDSFIKLWDLRRKGCIYTYRGHSKSI 145
+ RTLNGHK I + Y D L SGS D+ I+LWD+ C+ GH + +
Sbjct: 412 TSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 468
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
IRF D + I SG DG +++
Sbjct: 469 RCIRF--DNKRIVSGAYDGKIKV 489
Score = 130 (50.8 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 37/164 (22%), Positives = 76/164 (46%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H A+VN + K +++ GD + + +W + +L+GH + +Q+ +
Sbjct: 382 VGHRAAVNVVDFDDK--YIVSASGD-RTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DR 436
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL-- 129
+ +G +I++W++ R L GH+ + + F + SG+ D IK+WDL
Sbjct: 437 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLVA 494
Query: 130 ----RRKG---CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
R C+ T HS + ++F + Q ++S +D ++
Sbjct: 495 ALDPRAPAGTLCLRTLVEHSGRVFRLQFD-EFQIVSSSHDDTIL 537
Score = 119 (46.9 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 32/143 (22%), Positives = 64/143 (44%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88
Q + +G D + +W C L+GH+ V +Q+ E + G ++++W++
Sbjct: 273 QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVN 330
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR---GHSKSI 145
+ TL H ++ + F+ + + S D I +WD+ I R GH ++
Sbjct: 331 TGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAV 388
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
N + F D ++I S D +++
Sbjct: 389 NVVDF--DDKYIVSASGDRTIKV 409
Score = 102 (41.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 27/111 (24%), Positives = 54/111 (48%)
Query: 43 WALGKSNC--IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK 100
W G+ + I S S V +Q+ ++ + +G + +IKIW+ +R L GH
Sbjct: 245 WRCGRHSLQRIHCRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHT 302
Query: 101 SSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151
S+ + + + +GS DS +++WD+ + T H +++ +RF+
Sbjct: 303 GSVLCLQYDER--VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 351
Score = 69 (29.3 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S+D T+ WD+E + + E + +R + F + ++ G +G K+ W+
Sbjct: 437 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN--KRIVSGAYDG-KIKVWDLV 493
Query: 354 RQYDAQ-PMG 362
D + P G
Sbjct: 494 AALDPRAPAG 503
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 180 (68.4 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 46/159 (28%), Positives = 77/159 (48%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H SV CL ++ V+ TG D V +W + + +L H V ++F NG +
Sbjct: 306 HTGSVLCLQYDER---VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG---M 359
Query: 74 SAGCQSG-SIKIWNLAVPT---VQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL 129
C SI +W++A PT ++R L GH++++ VDF Y+ S S D IK+W+
Sbjct: 360 MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNT 417
Query: 130 RRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
+ T GH + I +++ + + SG D +R+
Sbjct: 418 STCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRL 454
Score = 178 (67.7 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 46/143 (32%), Positives = 70/143 (48%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMS---LSGHSTPVESVQFGNGEETLSAGCQSGSIKIWN 86
++ T D+ + +W + I L GH V V F + ++G ++ IK+WN
Sbjct: 359 MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRT--IKVWN 416
Query: 87 LAVPTVQRTLNGHKSSITSVDFHPYGDYLC-SGSLDSFIKLWDLRRKGCIYTYRGHSKSI 145
+ RTLNGHK I + Y D L SGS D+ I+LWD+ C+ GH + +
Sbjct: 417 TSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 473
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
IRF D + I SG DG +++
Sbjct: 474 RCIRF--DNKRIVSGAYDGKIKV 494
Score = 130 (50.8 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 37/164 (22%), Positives = 76/164 (46%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
+ H A+VN + K +++ GD + + +W + +L+GH + +Q+ +
Sbjct: 387 VGHRAAVNVVDFDDK--YIVSASGD-RTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DR 441
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDL-- 129
+ +G +I++W++ R L GH+ + + F + SG+ D IK+WDL
Sbjct: 442 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLVA 499
Query: 130 ----RRKG---CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
R C+ T HS + ++F + Q ++S +D ++
Sbjct: 500 ALDPRAPAGTLCLRTLVEHSGRVFRLQFD-EFQIVSSSHDDTIL 542
Score = 119 (46.9 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 32/143 (22%), Positives = 64/143 (44%)
Query: 29 QVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLA 88
Q + +G D + +W C L+GH+ V +Q+ E + G ++++W++
Sbjct: 278 QKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVN 335
Query: 89 VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYR---GHSKSI 145
+ TL H ++ + F+ + + S D I +WD+ I R GH ++
Sbjct: 336 TGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAV 393
Query: 146 NSIRFSPDGQWIASGGEDGVVRI 168
N + F D ++I S D +++
Sbjct: 394 NVVDF--DDKYIVSASGDRTIKV 414
Score = 105 (42.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 27/111 (24%), Positives = 55/111 (49%)
Query: 43 WALGKSNC--IMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHK 100
W G+ + I S S V +Q+ ++ + +G + +IKIW+ + +R L GH
Sbjct: 250 WRCGRHSLQRIHCRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKSTLECKRILTGHT 307
Query: 101 SSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFS 151
S+ + + + +GS DS +++WD+ + T H +++ +RF+
Sbjct: 308 GSVLCLQYDER--VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 356
Score = 69 (29.3 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLKVYGWEPA 353
L S S+D T+ WD+E + + E + +R + F + ++ G +G K+ W+
Sbjct: 442 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN--KRIVSGAYDG-KIKVWDLV 498
Query: 354 RQYDAQ-PMG 362
D + P G
Sbjct: 499 AALDPRAPAG 508
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 202 (76.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 46/155 (29%), Positives = 77/155 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++V C+ L +K + +G D + +W + C+ L GH V VQ+ +G +
Sbjct: 340 HTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-DGRRVV 395
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
S G +K+W+ T TL GH + + S+ F G ++ SGSLD+ I++WD+
Sbjct: 396 S-GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGN 452
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
CI+T GH + + + + SG D V+I
Sbjct: 453 CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKI 485
Score = 197 (74.4 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 45/160 (28%), Positives = 86/160 (53%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
M H A+V C+ + G+ + +G D V +W C+ +L GH+ V S+QF +G
Sbjct: 378 MGHVAAVRCV---QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIH 433
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
+S G SI++W++ TL GH+S + ++ + L SG+ DS +K+WD++
Sbjct: 434 VVS-GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDIKT 490
Query: 132 KGCIYTYRG---HSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T +G H ++ ++F+ + ++ + +DG V++
Sbjct: 491 GQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKL 528
Score = 186 (70.5 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 42/165 (25%), Positives = 80/165 (48%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
+ CL G + +G DD + +W+ C+ +L GH+ V S Q + + +G
Sbjct: 264 ITCLQF---CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGS 318
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
++K+WN TL GH S++ + H + SGS D+ +++WD+ C++
Sbjct: 319 TDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHV 376
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVV 182
GH ++ +++ DG+ + SG D +V++ T T +H +
Sbjct: 377 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPE--TETCLHTL 417
Score = 184 (69.8 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 35/139 (25%), Positives = 74/139 (53%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
++ +G D+ + +W CI +L GH++ V + E+ + +G + ++++W++
Sbjct: 313 IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIET 370
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
L GH +++ V + G + SG+ D +K+WD + C++T +GH+ + S++
Sbjct: 371 GQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 428
Query: 150 FSPDGQWIASGGEDGVVRI 168
F DG + SG D +R+
Sbjct: 429 F--DGIHVVSGSLDTSIRV 445
Score = 135 (52.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/103 (27%), Positives = 56/103 (54%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ +G D + +W + NCI +L+GH + ++ + L +G ++KIW++
Sbjct: 434 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTG 491
Query: 91 TVQRTLNG---HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+TL G H+S++T + F+ +++ + S D +KLWDL+
Sbjct: 492 QCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLK 532
Score = 54 (24.1 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 268 SGTCVPVSVSRTSLSILPQSPM-LCFILTTSSSADRTVNFWDLEKFSLVSTTE---KNSS 323
+G C+ SL+ S M L + S +AD TV WD++ + T + K+ S
Sbjct: 450 TGNCIHTLTGHQSLT----SGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS 505
Query: 324 TIRRLTFSE 332
+ L F++
Sbjct: 506 AVTCLQFNK 514
Score = 46 (21.3 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 292 FILTTSSSADRTVNFWDLE 310
F++T SS D TV WDL+
Sbjct: 516 FVIT--SSDDGTVKLWDLK 532
Score = 45 (20.9 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 12/57 (21%), Positives = 26/57 (45%)
Query: 293 ILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
I S S D ++ WD+E + + T + S + + L+ G+ + +K++
Sbjct: 432 IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIW 486
Score = 40 (19.1 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 14 HGASVNCLALGKKSGQV 30
HG+ V +LGKK +V
Sbjct: 54 HGSEVRSFSLGKKPCKV 70
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 194 (73.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 55/191 (28%), Positives = 90/191 (47%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H V + L GQ +G D ++ LW L GH+ V SV F +
Sbjct: 62 HSHFVQDVVLSS-DGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLN---GHKSSITSVDFHPYG--DYLCSGSLDSFIKLWD 128
+ + +IK+WN + + T++ GHK ++ V F P + S S D +K+W+
Sbjct: 121 VSASRDRTIKLWN-TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Query: 129 LRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTN-TSIHVVDL-SL 186
L+ T GHS +N++ SPDG ASGG+DGV+ + + L ++ ++ S+
Sbjct: 180 LQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILL---WDLAEGKKLYSLEAGSI 236
Query: 187 VHPLGTPPPQY 197
+H L P +Y
Sbjct: 237 IHSLCFSPNRY 247
Score = 177 (67.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 53/185 (28%), Positives = 86/185 (46%)
Query: 6 EKAEDFMAHGASVNCLALGKKSGQVLATGGDDKKVNLW-ALGKSNCIMS-LSGHSTPVES 63
E F+ H V +A + Q+++ D + + LW LG+ +S GH V
Sbjct: 96 ESTRRFVGHTKDVLSVAFSTDNRQIVSASRD-RTIKLWNTLGECKYTISEADGHKEWVSC 154
Query: 64 VQFGNGE--ETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLD 121
V+F T+ + ++K+WNL ++ TL GH + +V P G SG D
Sbjct: 155 VRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKD 214
Query: 122 SFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHV 181
I LWDL +Y+ S I+S+ FSP+ W+ + E+ + RI + L + S+ V
Sbjct: 215 GVILLWDLAEGKKLYSLEAGS-IIHSLCFSPNRYWLCAATENSI-RI---WDLESKSV-V 268
Query: 182 VDLSL 186
DL +
Sbjct: 269 EDLKV 273
Score = 168 (64.2 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 48/166 (28%), Positives = 74/166 (44%)
Query: 13 AHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSN-----CIMSLSGHSTPVESVQFG 67
AH V +A + V+ T DK + LW L K + ++GHS V+ V
Sbjct: 13 AHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLS 72
Query: 68 NGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLW 127
+ + +G G +++W+LA R GH + SV F + S S D IKLW
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 128 DLRRKGCIYTYR---GHSKSINSIRFSPDG--QWIASGGEDGVVRI 168
+ + C YT GH + ++ +RFSP+ I S D V++
Sbjct: 133 NTLGE-CKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Score = 124 (48.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 30/122 (24%), Positives = 54/122 (44%)
Query: 53 SLSGHSTPVESVQFG-NGEETLSAGCQSGSIKIWNL-----AVPTVQRTLNGHKSSITSV 106
++ H+ V ++ + + + + SI +W L + QR + GH + V
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDV 69
Query: 107 DFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVV 166
G + SGS D ++LWDL + GH+K + S+ FS D + I S D +
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTI 129
Query: 167 RI 168
++
Sbjct: 130 KL 131
Score = 69 (29.3 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 21/92 (22%), Positives = 37/92 (40%)
Query: 287 SPMLCFILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEGLK 346
SP S+S D+TV W+L+ L +T +S + + S G G +G+
Sbjct: 158 SPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGV- 216
Query: 347 VYGWEPARQYDAQPMGWGKV-QDLAVTGTQLW 377
+ W+ A + G + L + + W
Sbjct: 217 ILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYW 248
Score = 41 (19.5 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 280 SLSILPQSPMLCFILTTSSSADRTVNFWDLEKFSLV 315
SL P LC ++ + ++ WDLE S+V
Sbjct: 239 SLCFSPNRYWLC------AATENSIRIWDLESKSVV 268
Score = 39 (18.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 297 SSSADRTVNFWD 308
S+S DRT+ W+
Sbjct: 122 SASRDRTIKLWN 133
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 202 (76.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 46/155 (29%), Positives = 77/155 (49%)
Query: 14 HGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETL 73
H ++V C+ L +K + +G D + +W + C+ L GH V VQ+ +G +
Sbjct: 382 HTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-DGRRVV 437
Query: 74 SAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKG 133
S G +K+W+ T TL GH + + S+ F G ++ SGSLD+ I++WD+
Sbjct: 438 S-GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGN 494
Query: 134 CIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRI 168
CI+T GH + + + + SG D V+I
Sbjct: 495 CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKI 527
Score = 197 (74.4 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 45/160 (28%), Positives = 86/160 (53%)
Query: 12 MAHGASVNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEE 71
M H A+V C+ + G+ + +G D V +W C+ +L GH+ V S+QF +G
Sbjct: 420 MGHVAAVRCV---QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIH 475
Query: 72 TLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRR 131
+S G SI++W++ TL GH+S + ++ + L SG+ DS +K+WD++
Sbjct: 476 VVS-GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDIKT 532
Query: 132 KGCIYTYRG---HSKSINSIRFSPDGQWIASGGEDGVVRI 168
C+ T +G H ++ ++F+ + ++ + +DG V++
Sbjct: 533 GQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKL 570
Score = 186 (70.5 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 42/165 (25%), Positives = 80/165 (48%)
Query: 18 VNCLALGKKSGQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGC 77
+ CL G + +G DD + +W+ C+ +L GH+ V S Q + + +G
Sbjct: 306 ITCLQF---CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGS 360
Query: 78 QSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYT 137
++K+WN TL GH S++ + H + SGS D+ +++WD+ C++
Sbjct: 361 TDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHV 418
Query: 138 YRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIHVV 182
GH ++ +++ DG+ + SG D +V++ T T +H +
Sbjct: 419 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPE--TETCLHTL 459
Score = 184 (69.8 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 35/139 (25%), Positives = 74/139 (53%)
Query: 30 VLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAV 89
++ +G D+ + +W CI +L GH++ V + E+ + +G + ++++W++
Sbjct: 355 IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIET 412
Query: 90 PTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIR 149
L GH +++ V + G + SG+ D +K+WD + C++T +GH+ + S++
Sbjct: 413 GQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 470
Query: 150 FSPDGQWIASGGEDGVVRI 168
F DG + SG D +R+
Sbjct: 471 F--DGIHVVSGSLDTSIRV 487
Score = 135 (52.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/103 (27%), Positives = 56/103 (54%)
Query: 31 LATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNLAVP 90
+ +G D + +W + NCI +L+GH + ++ + L +G ++KIW++
Sbjct: 476 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTG 533
Query: 91 TVQRTLNG---HKSSITSVDFHPYGDYLCSGSLDSFIKLWDLR 130
+TL G H+S++T + F+ +++ + S D +KLWDL+
Sbjct: 534 QCLQTLQGPSKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLK 574
Score = 54 (24.1 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 268 SGTCVPVSVSRTSLSILPQSPM-LCFILTTSSSADRTVNFWDLEKFSLVSTTE---KNSS 323
+G C+ SL+ S M L + S +AD TV WD++ + T + K+ S
Sbjct: 492 TGNCIHTLTGHQSLT----SGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQS 547
Query: 324 TIRRLTFSE 332
+ L F++
Sbjct: 548 AVTCLQFNK 556
Score = 46 (21.3 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 292 FILTTSSSADRTVNFWDLE 310
F++T SS D TV WDL+
Sbjct: 558 FVIT--SSDDGTVKLWDLK 574
Score = 45 (20.9 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 12/57 (21%), Positives = 26/57 (45%)
Query: 293 ILTTSSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTEG-LKVY 348
I S S D ++ WD+E + + T + S + + L+ G+ + +K++
Sbjct: 474 IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIW 528
Score = 40 (19.1 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 14 HGASVNCLALGKKSGQV 30
HG+ V +LGKK +V
Sbjct: 96 HGSEVRSFSLGKKPCKV 112
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 197 (74.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 50/146 (34%), Positives = 72/146 (49%)
Query: 61 VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL 120
+ SV F + L+ G + I+IW+L+ + + L GH+ I S+DF P GD L SGS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIH 180
D +++WDLR C T + ++ SPDG+ IA+G D VR+ S T
Sbjct: 318 DRSVRIWDLRTSQCSLTL-SIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDS----TTGFL 372
Query: 181 VVDLSLVHPLGTPPPQYTSSVPFSHN 206
V L + G SV FS+N
Sbjct: 373 VERLDSGNENGNGHEDSVYSVAFSNN 398
Score = 197 (74.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 49/158 (31%), Positives = 78/158 (49%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G++LATG +DK + +W L I L GH + S+ F + L +G S++IW+L
Sbjct: 267 GKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDL 326
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY-------RG 140
TL+ + +T+V P G + +GSLD +++WD + G
Sbjct: 327 RTSQCSLTLS-IEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNG 385
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTS 178
H S+ S+ FS +G+ IASG D V++ +HL S
Sbjct: 386 HEDSVYSVAFSNNGEQIASGSLDRTVKL---WHLEGKS 420
Score = 149 (57.5 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 43/155 (27%), Positives = 70/155 (45%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSL-------SGHSTPVESVQFGNGEETLSAGCQSG 80
G+++A G D+ V +W + L +GH V SV F N E +++G
Sbjct: 350 GKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDR 409
Query: 81 SIKIWNLA-----VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI 135
++K+W+L T + T GHK + SV P +Y+ SGS D + WD +
Sbjct: 410 TVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPL 469
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
+GH S+ S+ S + S G +G+ G+
Sbjct: 470 LMLQGHRNSVISVAVS-----LNSKGTEGIFATGS 499
Score = 145 (56.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 41/126 (32%), Positives = 60/126 (47%)
Query: 57 HSTPVESVQFGNGEETLSAGCQSGSIKIWN-----LAVPTVQRTLNGHKSS--------- 102
HS+ V V+F + ++ GC + +++N L + + N +K
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCNK-TTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
I SV F P G L +G+ D I++WDL K I RGH + I S+ F PDG + SG
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 163 DGVVRI 168
D VRI
Sbjct: 318 DRSVRI 323
Score = 54 (24.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
S S DR+V WDL + S S T + + S G+ + G +
Sbjct: 314 SGSGDRSVRIWDL-RTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLD 359
Score = 50 (22.7 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSS-------TIRRLTFSEGGECLLGGDTE 343
L + S DRTV WD LV + + ++ + FS GE + G +
Sbjct: 352 LIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLD 408
Score = 49 (22.3 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 13/24 (54%), Positives = 13/24 (54%)
Query: 297 SSSADRTVNFWDLE-KFSLVSTTE 319
S S DRTV W LE K ST E
Sbjct: 404 SGSLDRTVKLWHLEGKSDKKSTCE 427
Score = 40 (19.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 297 SSSADRTVNFWD 308
S S DR V FWD
Sbjct: 451 SGSKDRGVIFWD 462
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 197 (74.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 50/146 (34%), Positives = 72/146 (49%)
Query: 61 VESVQFGNGEETLSAGCQSGSIKIWNLAVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSL 120
+ SV F + L+ G + I+IW+L+ + + L GH+ I S+DF P GD L SGS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 121 DSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTSIH 180
D +++WDLR C T + ++ SPDG+ IA+G D VR+ S T
Sbjct: 318 DRSVRIWDLRTSQCSLTL-SIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDS----TTGFL 372
Query: 181 VVDLSLVHPLGTPPPQYTSSVPFSHN 206
V L + G SV FS+N
Sbjct: 373 VERLDSGNENGNGHEDSVYSVAFSNN 398
Score = 197 (74.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 49/158 (31%), Positives = 78/158 (49%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSLSGHSTPVESVQFGNGEETLSAGCQSGSIKIWNL 87
G++LATG +DK + +W L I L GH + S+ F + L +G S++IW+L
Sbjct: 267 GKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDL 326
Query: 88 AVPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTY-------RG 140
TL+ + +T+V P G + +GSLD +++WD + G
Sbjct: 327 RTSQCSLTLS-IEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNG 385
Query: 141 HSKSINSIRFSPDGQWIASGGEDGVVRIGASFHLTNTS 178
H S+ S+ FS +G+ IASG D V++ +HL S
Sbjct: 386 HEDSVYSVAFSNNGEQIASGSLDRTVKL---WHLEGKS 420
Score = 149 (57.5 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 43/155 (27%), Positives = 70/155 (45%)
Query: 28 GQVLATGGDDKKVNLWALGKSNCIMSL-------SGHSTPVESVQFGNGEETLSAGCQSG 80
G+++A G D+ V +W + L +GH V SV F N E +++G
Sbjct: 350 GKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDR 409
Query: 81 SIKIWNLA-----VPTVQRTLNGHKSSITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCI 135
++K+W+L T + T GHK + SV P +Y+ SGS D + WD +
Sbjct: 410 TVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPL 469
Query: 136 YTYRGHSKSINSIRFSPDGQWIASGGEDGVVRIGA 170
+GH S+ S+ S + S G +G+ G+
Sbjct: 470 LMLQGHRNSVISVAVS-----LNSKGTEGIFATGS 499
Score = 145 (56.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 41/126 (32%), Positives = 60/126 (47%)
Query: 57 HSTPVESVQFGNGEETLSAGCQSGSIKIWN-----LAVPTVQRTLNGHKSS--------- 102
HS+ V V+F + ++ GC + +++N L + + N +K
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCNK-TTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 103 ITSVDFHPYGDYLCSGSLDSFIKLWDLRRKGCIYTYRGHSKSINSIRFSPDGQWIASGGE 162
I SV F P G L +G+ D I++WDL K I RGH + I S+ F PDG + SG
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 163 DGVVRI 168
D VRI
Sbjct: 318 DRSVRI 323
Score = 54 (24.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 297 SSSADRTVNFWDLEKFSLVSTTEKNSSTIRRLTFSEGGECLLGGDTE 343
S S DR+V WDL + S S T + + S G+ + G +
Sbjct: 314 SGSGDRSVRIWDL-RTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLD 359
Score = 50 (22.7 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 294 LTTSSSADRTVNFWDLEKFSLVSTTEKNSS-------TIRRLTFSEGGECLLGGDTE 343
L + S DRTV WD LV + + ++ + FS GE + G +
Sbjct: 352 LIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLD 408
Score = 49 (22.3 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 13/24 (54%), Positives = 13/24 (54%)
Query: 297 SSSADRTVNFWDLE-KFSLVSTTE 319
S S DRTV W LE K ST E
Sbjct: 404 SGSLDRTVKLWHLEGKSDKKSTCE 427
Score = 40 (19.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 297 SSSADRTVNFWD 308
S S DR V FWD
Sbjct: 451 SGSKDRGVIFWD 462
WARNING: HSPs involving 1027 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 845 826 0.00079 122 3 11 23 0.44 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1277
No. of states in DFA: 621 (66 KB)
Total size of DFA: 413 KB (2199 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 77.96u 0.16s 78.12t Elapsed: 00:00:05
Total cpu time: 78.10u 0.16s 78.26t Elapsed: 00:00:06
Start: Thu Aug 15 13:43:41 2013 End: Thu Aug 15 13:43:47 2013
WARNINGS ISSUED: 2