BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4670
(643 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2GV9|A Chain A, Crystal Structure Of The Herpes Simplex Virus Type 1 Dna
Polymerase
pdb|2GV9|B Chain B, Crystal Structure Of The Herpes Simplex Virus Type 1 Dna
Polymerase
Length = 1193
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 13/145 (8%)
Query: 191 IACQGLMGWYMVQSGLEDRFHIQSDVPRVSQYRLASHLSMAFLLYSGLLWTALDHLLPSS 250
+ C + G+ VQ GL H+ + V + + L +A Y W A + LL
Sbjct: 770 VVCNSVYGFTGVQHGLLPCLHVAATVTTIGREML-----LATREYVHARWAAFEQLLADF 824
Query: 251 KQLADNRAGLVRFKRLAYMSKGLIFVTA----LSGLTRWSSQVATTLSENVAKPNI-LEK 305
+ AD RA R+ Y IFV +GLT ++A+ +S + P I LE
Sbjct: 825 PEAADMRAPGPYSMRIIYGDTDSIFVLCRGLTAAGLTAMGDKMASHISRALFLPPIKLEC 884
Query: 306 PTRITGYWLLGCS---GMVFGAVVL 327
T L+ G+++G +L
Sbjct: 885 EKTFTKLLLIAKKKYIGVIYGGKML 909
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 61/164 (37%), Gaps = 30/164 (18%)
Query: 344 KLFGEKLPRNSAEWIEEFNLYKEYPEFKLQNIGLMGWYMVQSGLEDRFHTQSDVPRVSQY 403
K ++P++S E E L K+ K+ + G+ VQ GL H + V + +
Sbjct: 744 KQIRSRIPQSSPE--EAVLLDKQQAAIKVVCNSVYGFTGVQHGLLPCLHVAATVTTIGRE 801
Query: 404 RLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGE 463
L +A Y W A + LL + AD RA R+ Y IFV
Sbjct: 802 ML-----LATREYVHARWAAFEQLLADFPEAADMRAPGPYSMRIIYGDTDSIFV------ 850
Query: 464 NMLRGLMGWYMVQSGLEDRFHTQSDVPRVSQYRLASHLSMAFLL 507
+ RGL + G ++ASH+S A L
Sbjct: 851 -LCRGLTAAGLTAMG----------------DKMASHISRALFL 877
>pdb|1LD4|A Chain A, Placement Of The Structural Proteins In Sindbis Virus
pdb|1LD4|B Chain B, Placement Of The Structural Proteins In Sindbis Virus
pdb|1LD4|C Chain C, Placement Of The Structural Proteins In Sindbis Virus
pdb|1LD4|D Chain D, Placement Of The Structural Proteins In Sindbis Virus
pdb|3J0F|A Chain A, Sindbis Virion
pdb|3J0F|B Chain B, Sindbis Virion
pdb|3J0F|C Chain C, Sindbis Virion
pdb|3J0F|D Chain D, Sindbis Virion
Length = 264
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 70 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 117
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 215 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 264
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 310 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 357
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 215 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 264
>pdb|1KXF|A Chain A, Sindbis Virus Capsid, (Wild-Type) Residues 1-264,
Tetragonal Crystal Form (Form Ii)
Length = 264
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 70 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 117
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 215 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 264
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 310 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 357
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 215 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 264
>pdb|1KXD|A Chain A, Sindbis Virus Capsid (N222l Mutant), Tetragonal Crystal
Form
Length = 159
Score = 32.3 bits (72), Expect = 0.75, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 70 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 117
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 110 SGRPIMDLSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 159
Score = 32.3 bits (72), Expect = 0.75, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 310 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 357
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 110 SGRPIMDLSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 159
>pdb|2SNW|A Chain A, Sindbis Virus Capsid Protein, Type3 Crystal Form
pdb|2SNW|B Chain B, Sindbis Virus Capsid Protein, Type3 Crystal Form
Length = 158
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 70 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 117
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 109 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 158
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 310 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 357
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 109 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 158
>pdb|1WYK|A Chain A, Sindbis Virus Capsid Protein (114-264)
pdb|1WYK|B Chain B, Sindbis Virus Capsid Protein (114-264)
pdb|1WYK|C Chain C, Sindbis Virus Capsid Protein (114-264)
pdb|1WYK|D Chain D, Sindbis Virus Capsid Protein (114-264)
Length = 152
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 70 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 117
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 103 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 152
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 310 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 357
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 103 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 152
>pdb|1Z8Y|Q Chain Q, Mapping The E2 Glycoprotein Of Alphaviruses
pdb|1Z8Y|R Chain R, Mapping The E2 Glycoprotein Of Alphaviruses
pdb|1Z8Y|S Chain S, Mapping The E2 Glycoprotein Of Alphaviruses
pdb|1Z8Y|T Chain T, Mapping The E2 Glycoprotein Of Alphaviruses
pdb|2SNV|A Chain A, The Refined Structure Of Sindbis Virus Core Protein In
Comparison With Other Chymotrypsin-Like Serine
Proteinase Structures
Length = 151
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 70 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 117
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 102 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 151
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 310 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 357
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 102 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 151
>pdb|1KXE|A Chain A, Sindbis Virus Capsid (Y180s, E183g Double Mutant),
Tetragonal Crystal Form
Length = 159
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 70 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 117
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 110 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 159
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 310 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 357
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 110 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 159
>pdb|1KXA|A Chain A, Sindbis Virus Capsid, (Wild-Type) Residues 106-264,
Tetragonal Crystal Form
Length = 159
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 70 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 117
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 110 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 159
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 310 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 357
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 110 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 159
>pdb|1KXC|A Chain A, Sindbis Virus Capsid (N190k Mutant), Tetragonal Crystal
Form
Length = 159
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 70 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 117
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 110 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 159
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 310 TGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 357
+G ++ SG V A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 110 SGRPIMDNSGRVV-AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 159
>pdb|1KXB|A Chain A, Sindbis Virus Capsid (S215a Mutant), Tetragonal Crystal
Form
Length = 159
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 84 AVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 117
A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 123 AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 159
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 324 AVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 357
A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 123 AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 159
>pdb|1SVP|A Chain A, Sindbis Virus Capsid Protein
pdb|1SVP|B Chain B, Sindbis Virus Capsid Protein
Length = 161
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 84 AVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 117
A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 123 AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 159
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 324 AVVLGGVTRLTESGLSMVTWKLFGEKL---PRNSAEW 357
A+VLGG T + LS+VTW G+ + P + EW
Sbjct: 123 AIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW 159
>pdb|3SS6|A Chain A, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa
Acetyltransferase
pdb|3SS6|B Chain B, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa
Acetyltransferase
Length = 394
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 39/98 (39%), Gaps = 9/98 (9%)
Query: 248 PSSKQLADNRAGLVRFKRLAYMSKGLIFVTALSGLTRWSSQVATTLSENVAKPNILEKPT 307
P + A+ AGL + A+ G + SGL S+ V +SE AK L+
Sbjct: 221 PRADITAEKLAGL----KPAFRKDGSVTAGNASGLNDGSA-VLVLMSEEKAKEKGLQPLA 275
Query: 308 RITGYWLLGCSGMVFGAVVLGGVTRLTESGLSMVTWKL 345
RI GY + G + G G GL V W L
Sbjct: 276 RIVGYSVAGVDPKIMGI----GPAPAIRKGLEKVDWSL 309
>pdb|1VCP|A Chain A, Semliki Forest Virus Capsid Protein (crystal Form I)
pdb|1VCP|B Chain B, Semliki Forest Virus Capsid Protein (crystal Form I)
pdb|1VCP|C Chain C, Semliki Forest Virus Capsid Protein (crystal Form I)
pdb|1VCQ|A Chain A, Semliki Forest Virus Capsid Protein (Crystal Form Ii)
pdb|1VCQ|B Chain B, Semliki Forest Virus Capsid Protein (Crystal Form Ii)
pdb|1DYL|A Chain A, 9 Angstrom Resolution Cryo-Em Reconstruction Structure Of
Semliki Forest Virus (Sfv) And Fitting Of The Capsid
Protein Structure In The Em Density
pdb|1DYL|B Chain B, 9 Angstrom Resolution Cryo-Em Reconstruction Structure Of
Semliki Forest Virus (Sfv) And Fitting Of The Capsid
Protein Structure In The Em Density
pdb|1DYL|C Chain C, 9 Angstrom Resolution Cryo-Em Reconstruction Structure Of
Semliki Forest Virus (Sfv) And Fitting Of The Capsid
Protein Structure In The Em Density
pdb|1DYL|D Chain D, 9 Angstrom Resolution Cryo-Em Reconstruction Structure Of
Semliki Forest Virus (Sfv) And Fitting Of The Capsid
Protein Structure In The Em Density
Length = 149
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 84 AVVLGGVTRLTESGLSMVTWK--LFGEKLPRNSAEW 117
A+VLGG + + LS+VTW + P S EW
Sbjct: 114 AIVLGGANEGSRTALSVVTWNKDMVTRVTPEGSEEW 149
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 324 AVVLGGVTRLTESGLSMVTWK--LFGEKLPRNSAEW 357
A+VLGG + + LS+VTW + P S EW
Sbjct: 114 AIVLGGANEGSRTALSVVTWNKDMVTRVTPEGSEEW 149
>pdb|3I6D|A Chain A, Crystal Structure Of Ppo From Bacillus Subtilis With Af
pdb|3I6D|B Chain B, Crystal Structure Of Ppo From Bacillus Subtilis With Af
Length = 470
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 496 RLASHLSMAFLLYSGLLWTALDHLLPSSKQLADNRAGLLRFKRLAYMSKGLIFVTALSGA 555
++A +S SG A+D +LP+SK D G +R+ + LSG
Sbjct: 117 KIAPFVSTGLFSLSGKARAAMDFILPASKTKDDQSLGEFFRRRVGDEVVENLIEPLLSGI 176
Query: 556 FVAGLDAGLVYNSFP 570
+ +D + ++FP
Sbjct: 177 YAGDIDKLSLMSTFP 191
>pdb|3UO3|A Chain A, Jac1 Co-Chaperone From Saccharomyces Cerevisiae, 5-182
Clone
pdb|3UO3|B Chain B, Jac1 Co-Chaperone From Saccharomyces Cerevisiae, 5-182
Clone
Length = 181
Score = 29.3 bits (64), Expect = 6.5, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 333 LTESGLSMVTWKLFGEKLPRNSAEW-IEEFNLYKEYPEFKLQNIGLMGWYMVQ--SGLED 389
L + + ++LF + P+ W I++ L KEY + + Q+ M + S L
Sbjct: 4 LVQRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQ 63
Query: 390 RFHTQSDVPRVSQYRL 405
+HT D R SQY L
Sbjct: 64 AYHTLKDPLRRSQYML 79
>pdb|1CZS|A Chain A, Crystal Structure Of The C2 Domain Of Human Coagulation
Factor V: Complex With Phenylmercury
pdb|1CZT|A Chain A, Crystal Structure Of The C2 Domain Of Human Coagulation
Factor V
pdb|1CZV|A Chain A, Crystal Structure Of The C2 Domain Of Human Coagulation
Factor V: Dimeric Crystal Form
pdb|1CZV|B Chain B, Crystal Structure Of The C2 Domain Of Human Coagulation
Factor V: Dimeric Crystal Form
Length = 160
Score = 28.9 bits (63), Expect = 8.4, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 131 KLKNKDITLEEFKRIWWMEY 150
K++NK IT FK+ WW +Y
Sbjct: 12 KIENKQITASSFKKSWWGDY 31
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.137 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,613,826
Number of Sequences: 62578
Number of extensions: 755486
Number of successful extensions: 2305
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2286
Number of HSP's gapped (non-prelim): 36
length of query: 643
length of database: 14,973,337
effective HSP length: 105
effective length of query: 538
effective length of database: 8,402,647
effective search space: 4520624086
effective search space used: 4520624086
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)