RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy4671
         (104 letters)



>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 114

 Score = 22.7 bits (48), Expect = 8.1
 Identities = 6/20 (30%), Positives = 10/20 (50%)

Query: 56  YMQVALGITTLLTYVPVSIA 75
           Y +   G+   LT   V++A
Sbjct: 95  YSKKGDGLCQKLTLPCVNLA 114


>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine
           synthase) {Haemophilus influenzae [TaxId: 727]}
          Length = 310

 Score = 23.4 bits (49), Expect = 9.0
 Identities = 7/43 (16%), Positives = 17/43 (39%)

Query: 19  VLGISVFSLLTAQYWMGRKLKLPGRANLALACVTGMAYMQVAL 61
           + GIS  + + A   + +  +   +  + +       Y+  AL
Sbjct: 267 LAGISSGAAVAAADRLAKLPEFADKLIVVILPSASERYLSTAL 309


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.327    0.135    0.404 

Gapped
Lambda     K      H
   0.267   0.0690    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 350,655
Number of extensions: 12227
Number of successful extensions: 33
Number of sequences better than 10.0: 1
Number of HSP's gapped: 33
Number of HSP's successfully gapped: 3
Length of query: 104
Length of database: 2,407,596
Length adjustment: 65
Effective length of query: 39
Effective length of database: 1,515,146
Effective search space: 59090694
Effective search space used: 59090694
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 47 (22.0 bits)