BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy4672
         (78 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A4WFX9|TATD_ENT38 Tat-linked quality control protein TatD OS=Enterobacter sp. (strain
           638) GN=tatD PE=3 SV=2
          Length = 260

 Score = 37.0 bits (84), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 11/74 (14%)

Query: 9   LEPLNKALLILILCWSGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYPN------ 62
           +E LN+ L + I   +G++C +     L+ +L    +P DR+LVE+DAP+L P       
Sbjct: 162 VECLNRGLYLGI---TGWVCDERRGLELRELLPV--IPADRLLVETDAPYLLPRDMKPKP 216

Query: 63  ARAAKLPIHVRHLV 76
           A     P ++ H+V
Sbjct: 217 ASRRNEPAYLGHIV 230


>sp|C6DI71|TATD_PECCP Tat-linked quality control protein TatD OS=Pectobacterium
           carotovorum subsp. carotovorum (strain PC1) GN=tatD PE=3
           SV=1
          Length = 260

 Score = 35.8 bits (81), Expect = 0.074,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 2/43 (4%)

Query: 19  LILCWSGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           L++  +G++C +     L+ +L    +P DR+LVE+DAP+L P
Sbjct: 170 LMVGITGWVCDERRGLELRALLP--HIPADRLLVETDAPYLLP 210


>sp|C6C4V4|TATD_DICDC Tat-linked quality control protein TatD OS=Dickeya dadantii (strain
           Ech703) GN=tatD PE=3 SV=1
          Length = 264

 Score = 35.8 bits (81), Expect = 0.080,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 2/38 (5%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           +G++C +     L+ +LE   +P DR+L+E+DAP+L P
Sbjct: 175 TGWVCDERRGLALRALLEY--IPDDRLLLETDAPYLLP 210


>sp|Q6DAQ1|TATD_ERWCT Tat-linked quality control protein TatD OS=Erwinia carotovora
           subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
           GN=tatD PE=3 SV=1
          Length = 260

 Score = 35.8 bits (81), Expect = 0.088,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 2/43 (4%)

Query: 19  LILCWSGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           L++  +G++C +     L+ +L    +P DR+LVE+DAP+L P
Sbjct: 170 LMIGITGWVCDERRGLELRALLP--HIPADRLLVETDAPYLLP 210


>sp|D0KC77|TATD_PECWW Tat-linked quality control protein TatD OS=Pectobacterium wasabiae
           (strain WPP163) GN=tatD PE=3 SV=1
          Length = 260

 Score = 35.4 bits (80), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           +G++C +     L+ +L    +P DR+LVE+DAP+L P
Sbjct: 175 TGWVCDERRGLELRALLP--HIPADRLLVETDAPYLLP 210


>sp|E0SLH6|TATD_DICD3 Tat-linked quality control protein TatD OS=Dickeya dadantii (strain
           3937) GN=tatD PE=3 SV=1
          Length = 264

 Score = 35.0 bits (79), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 2/43 (4%)

Query: 19  LILCWSGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           L++  +G++C +     L+ +L    +P DR+L+E+DAP+L P
Sbjct: 170 LMIGITGWVCDERRGLALRALLP--RIPDDRLLLETDAPYLLP 210


>sp|A8G8C4|TATD_SERP5 Tat-linked quality control protein TatD OS=Serratia proteamaculans
           (strain 568) GN=tatD PE=3 SV=1
          Length = 260

 Score = 34.3 bits (77), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 26/38 (68%), Gaps = 2/38 (5%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           +G++C +     L+ +L   ++P DR+L+E+DAP+L P
Sbjct: 175 TGWVCDERRGLELRALLP--QIPADRLLLETDAPYLLP 210


>sp|A7MQN1|TATD_CROS8 Tat-linked quality control protein TatD OS=Cronobacter sakazakii
           (strain ATCC BAA-894) GN=tatD PE=3 SV=2
          Length = 263

 Score = 34.3 bits (77), Expect = 0.24,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 19  LILCWSGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYPNARAAK 67
           L L  +G++C +     L+ +L    +P DR+L+E+DAP+L P   A +
Sbjct: 169 LYLGITGWVCDERRGLELRALLPV--IPADRLLLETDAPYLLPRDLAPR 215


>sp|P73335|Y1786_SYNY3 Uncharacterized deoxyribonuclease sll1786 OS=Synechocystis sp.
           (strain PCC 6803 / Kazusa) GN=sll1786 PE=3 SV=1
          Length = 261

 Score = 34.3 bits (77), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)

Query: 37  QGMLESGEL-PMDRILVESDAPFLYPNARAAKL--PIHVRHL 75
           +G+  S ++ P DR+LVE+D PFL P  +  K   P  VRH+
Sbjct: 187 EGIQASAQMVPPDRLLVETDCPFLAPVPQRGKRNEPAFVRHV 228


>sp|E3G381|TATD_ENTCS Tat-linked quality control protein TatD OS=Enterobacter cloacae
           (strain SCF1) GN=tatD PE=3 SV=1
          Length = 260

 Score = 33.5 bits (75), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYPNARAAK 67
           +G++C +     L+ ML    +P +R++VE+DAP+L P     K
Sbjct: 174 TGWVCDERRGLALRDMLPL--IPANRLMVETDAPYLLPRDMTPK 215


>sp|A8ACY8|TATD_CITK8 Tat-linked quality control protein TatD OS=Citrobacter koseri
           (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=tatD
           PE=3 SV=2
          Length = 260

 Score = 33.1 bits (74), Expect = 0.46,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 11/75 (14%)

Query: 8   MLEPLNKALLILILCWSGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYPN----- 62
           M E +++ L I I   +G++C +     L+ +L    +P +++L+E+DAP+L P      
Sbjct: 161 MQECIDRGLYIGI---TGWVCDERRGLELRELLPF--IPAEKLLIETDAPYLLPRDLTPK 215

Query: 63  -ARAAKLPIHVRHLV 76
            A     P H+ H++
Sbjct: 216 PASRRNEPAHLAHIL 230


>sp|E8XYF5|TATD_RAHSY Tat-linked quality control protein TatD OS=Rahnella sp. (strain
           Y9602) GN=tatD PE=3 SV=1
          Length = 263

 Score = 33.1 bits (74), Expect = 0.52,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           +G++C +     L+ ML    +P DR+++E+DAP+L P
Sbjct: 175 TGWVCDERRGLELRDMLPL--IPADRLMLETDAPYLLP 210


>sp|C9XTA5|TATD_CROTZ Tat-linked quality control protein TatD OS=Cronobacter turicensis
           (strain DSM 18703 / LMG 23827 / z3032) GN=tatD PE=3 SV=2
          Length = 263

 Score = 33.1 bits (74), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           +G++C +     L+ +L    +P DR+L+E+DAP+L P
Sbjct: 174 TGWVCDERRGLELRALLPI--IPADRLLLETDAPYLLP 209


>sp|Q93075|TATD2_HUMAN Putative deoxyribonuclease TATDN2 OS=Homo sapiens GN=TATDN2 PE=1
           SV=2
          Length = 761

 Score = 32.7 bits (73), Expect = 0.65,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 3/57 (5%)

Query: 5   SIPMLEPLNKALLILILCWSGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           S P++EPL K    + + ++  +   S+    + + +   +P++RI+VE+DAP+  P
Sbjct: 660 SYPVIEPLLKYFPNMSVGFTAVLTYSSAWEAREALRQ---IPLERIIVETDAPYFLP 713


>sp|D2TUZ4|TATD_CITRI Tat-linked quality control protein TatD OS=Citrobacter rodentium
           (strain ICC168) GN=tatD PE=3 SV=1
          Length = 263

 Score = 32.7 bits (73), Expect = 0.67,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 5/60 (8%)

Query: 8   MLEPLNKALLILILCWSGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYPNARAAK 67
           M E L + L I I   +G++C +     L+ +L    +P +++L+E+DAP+L P   + K
Sbjct: 161 MQECLERGLYIGI---TGWVCDERRGLALRELLPL--IPTEKLLIETDAPYLLPRDLSPK 215


>sp|P37545|YABD_BACSU Uncharacterized deoxyribonuclease YabD OS=Bacillus subtilis (strain
           168) GN=yabD PE=3 SV=1
          Length = 255

 Score = 32.7 bits (73), Expect = 0.71,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)

Query: 44  ELPMDRILVESDAPFLYPNARAAKL--PIHVRHL 75
           E+P DR+L+E+D PFL P+    K   P +V+++
Sbjct: 192 EIPNDRLLIETDCPFLTPHPFRGKRNEPSYVKYV 225


>sp|D4GGR2|TATD_PANAM Tat-linked quality control protein TatD OS=Pantoea ananatis (strain
           LMG 20103) GN=tatD PE=3 SV=2
          Length = 260

 Score = 32.7 bits (73), Expect = 0.71,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           +G++C +     L+ ML    +P +R+L+E+DAP+L P
Sbjct: 175 TGWVCDERRGIALREMLPL--IPAERLLLETDAPYLLP 210


>sp|D0Z9R0|TATD_EDWTE Tat-linked quality control protein TatD OS=Edwardsiella tarda
           (strain EIB202) GN=tatD PE=3 SV=1
          Length = 260

 Score = 32.7 bits (73), Expect = 0.71,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           +G+IC +     L+ +L    +P +R+L+E+DAP+L P
Sbjct: 175 TGWICDERRGMPLRALLP--HIPAERLLLETDAPYLLP 210


>sp|E1SKR8|TATD_PANVC Tat-linked quality control protein TatD OS=Pantoea vagans (strain
           C9-1) GN=tatD PE=3 SV=1
          Length = 260

 Score = 32.0 bits (71), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           +G++C +     L+ +L    +P DR+L+E+DAP+L P
Sbjct: 175 TGWVCDERRGLELRELLPL--IPADRLLLETDAPYLLP 210


>sp|B5XYH5|TATD_KLEP3 Tat-linked quality control protein TatD OS=Klebsiella pneumoniae
           (strain 342) GN=tatD PE=3 SV=1
          Length = 263

 Score = 32.0 bits (71), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)

Query: 17  LILILCWSGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           L L +  +G++C +     L+ +L +  +P +R+L+E+DAP+L P
Sbjct: 167 LGLFIGITGWVCDERRGLELRELLPA--IPAERLLLETDAPYLLP 209


>sp|D8MKW4|TATD_ERWBE Tat-linked quality control protein TatD OS=Erwinia billingiae
           (strain Eb661) GN=tatD PE=3 SV=1
          Length = 261

 Score = 32.0 bits (71), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYPNARAAKLP 69
           +G++C +     L+ ++    +P DR+L+E+DAP+L P     + P
Sbjct: 175 TGWVCDERRGVELRELMPL--IPADRLLLETDAPYLLPRDMRPRPP 218


>sp|Q9PRC8|Y017_UREPA Uncharacterized deoxyribonuclease UU017 OS=Ureaplasma parvum
           serovar 3 (strain ATCC 700970) GN=UU017 PE=3 SV=1
          Length = 265

 Score = 31.6 bits (70), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/16 (68%), Positives = 15/16 (93%)

Query: 46  PMDRILVESDAPFLYP 61
           P+D+ILVE+DAP+L P
Sbjct: 203 PLDKILVETDAPYLTP 218


>sp|Q89AG7|Y325_BUCBP Uncharacterized deoxyribonuclease bbp_325 OS=Buchnera aphidicola
           subsp. Baizongia pistaciae (strain Bp) GN=bbp_325 PE=3
           SV=1
          Length = 265

 Score = 31.2 bits (69), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/17 (58%), Positives = 16/17 (94%)

Query: 45  LPMDRILVESDAPFLYP 61
           +P+DRIL+E+D+P+L P
Sbjct: 196 VPIDRILIETDSPYLSP 212


>sp|P0AFQ7|YCFH_ECOLI Uncharacterized deoxyribonuclease YcfH OS=Escherichia coli (strain
           K12) GN=ycfH PE=1 SV=1
          Length = 265

 Score = 31.2 bits (69), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/17 (58%), Positives = 16/17 (94%)

Query: 45  LPMDRILVESDAPFLYP 61
           +P+DR+LVE+D+P+L P
Sbjct: 195 VPLDRLLVETDSPYLAP 211


>sp|P0AFQ8|YCFH_ECOL6 Uncharacterized deoxyribonuclease YcfH OS=Escherichia coli O6:H1
           (strain CFT073 / ATCC 700928 / UPEC) GN=ycfH PE=3 SV=1
          Length = 265

 Score = 31.2 bits (69), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/17 (58%), Positives = 16/17 (94%)

Query: 45  LPMDRILVESDAPFLYP 61
           +P+DR+LVE+D+P+L P
Sbjct: 195 VPLDRLLVETDSPYLAP 211


>sp|P0AFQ9|YCFH_ECO57 Uncharacterized deoxyribonuclease YcfH OS=Escherichia coli O157:H7
           GN=ycfH PE=3 SV=1
          Length = 265

 Score = 31.2 bits (69), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/17 (58%), Positives = 16/17 (94%)

Query: 45  LPMDRILVESDAPFLYP 61
           +P+DR+LVE+D+P+L P
Sbjct: 195 VPLDRLLVETDSPYLAP 211


>sp|Q0SZ31|TATD_SHIF8 Tat-linked quality control protein TatD OS=Shigella flexneri
           serotype 5b (strain 8401) GN=tatD PE=3 SV=1
          Length = 260

 Score = 31.2 bits (69), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 8/59 (13%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYPNARAAK------LPIHVRHLV 76
           +G++C +     L+ +L    +P +++L+E+DAP+L P     K       P H+ H++
Sbjct: 174 TGWVCDERRGLELRELLPL--IPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHIL 230


>sp|P27859|TATD_ECOLI Tat-linked quality control protein TatD OS=Escherichia coli (strain
           K12) GN=tatD PE=1 SV=3
          Length = 260

 Score = 31.2 bits (69), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 8/59 (13%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYPNARAAK------LPIHVRHLV 76
           +G++C +     L+ +L    +P +++L+E+DAP+L P     K       P H+ H++
Sbjct: 174 TGWVCDERRGLELRELLPL--IPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHIL 230


>sp|B1JP69|TATD_YERPY Tat-linked quality control protein TatD OS=Yersinia
           pseudotuberculosis serotype O:3 (strain YPIII) GN=tatD
           PE=3 SV=1
          Length = 260

 Score = 31.2 bits (69), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 2/38 (5%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           +G++C +     L+ +L    +P+ ++L+E+DAP+L P
Sbjct: 175 TGWVCDERRGLDLRALLP--RIPVQQLLLETDAPYLLP 210


>sp|D4ICL5|TATD_ERWAE Tat-linked quality control protein TatD OS=Erwinia amylovora
           (strain ATCC 49946 / CCPPB 0273 / Ea273 / 27-3) GN=tatD
           PE=3 SV=1
          Length = 259

 Score = 30.8 bits (68), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYPNARAAKLP 69
           +G+IC +     L+ ++    +P DR+L+E+DAP+L P     + P
Sbjct: 175 TGWICDERRGQELRELVPL--IPADRLLLETDAPWLLPRDMRPRPP 218


>sp|B2VG45|TATD_ERWT9 Tat-linked quality control protein TatD OS=Erwinia tasmaniensis
           (strain DSM 17950 / Et1/99) GN=tatD PE=3 SV=1
          Length = 259

 Score = 30.8 bits (68), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 6/56 (10%)

Query: 7   PMLEP-LNKALLILILCWSGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           P LE  L + L I I   +G+IC +     L+ ++    +P DR+L+E+DAP+L P
Sbjct: 160 PELESCLAEGLFIGI---TGWICDERRGQELRELMPL--IPADRLLLETDAPWLLP 210


>sp|B7LTZ5|TATD_ESCF3 Tat-linked quality control protein TatD OS=Escherichia fergusonii
           (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=tatD
           PE=3 SV=1
          Length = 260

 Score = 30.0 bits (66), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 2/38 (5%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           +G++C +     L+ +L    +P +++L+E+DAP+L P
Sbjct: 174 TGWVCDERRGLELRELLPL--IPAEKLLIETDAPYLLP 209


>sp|E6WHK1|TATD_PANSA Tat-linked quality control protein TatD OS=Pantoea sp. (strain
           At-9b) GN=tatD PE=3 SV=1
          Length = 260

 Score = 29.6 bits (65), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 2/38 (5%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           +G++C +     L+ +L    +P +R+L+E+DAP+L P
Sbjct: 175 TGWVCDERRGMELRELLPL--IPAERLLLETDAPWLLP 210


>sp|Q9L6M2|TATD_SALTY Tat-linked quality control protein TatD OS=Salmonella typhimurium
           (strain LT2 / SGSC1412 / ATCC 700720) GN=tatD PE=3 SV=1
          Length = 260

 Score = 29.6 bits (65), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 2/38 (5%)

Query: 24  SGYICKDSSEAGLQGMLESGELPMDRILVESDAPFLYP 61
           +G++C +     L+ +L    +P +++L+E+DAP+L P
Sbjct: 174 TGWVCDERRGLELRELLPF--IPAEKLLIETDAPYLLP 209


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.139    0.425 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,022,616
Number of Sequences: 539616
Number of extensions: 877699
Number of successful extensions: 2613
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 2598
Number of HSP's gapped (non-prelim): 36
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)