BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4673
(171 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|E6WHK1|TATD_PANSA Tat-linked quality control protein TatD OS=Pantoea sp. (strain
At-9b) GN=tatD PE=3 SV=1
Length = 260
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 55/84 (65%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F +D E VV RA+D+GV ++ G++ S++A RLA +PG +STA
Sbjct: 1 MFDIGVNLTSTQFAKDREQVVARARDAGVTGLLITGTNALESQQAQRLAEWHPGYCWSTA 60
Query: 85 GIHPHEAKSWDEDYIDQLRDLVSN 108
G+HPH A +W + + LR L +
Sbjct: 61 GVHPHHASAWSAETANTLRRLAES 84
>sp|D0Z9R0|TATD_EDWTE Tat-linked quality control protein TatD OS=Edwardsiella tarda
(strain EIB202) GN=tatD PE=3 SV=1
Length = 260
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
++D+G NLTN +F D+ VV RA+ +G+ +I G++L S +AL LA+ YP ++TA
Sbjct: 1 MLDIGVNLTNGQFSGDVPQVVARARQAGLNGMIITGTNLTESAQALHLAQAYPDFCWATA 60
Query: 85 GIHPHEAKSWDEDYIDQLRDLVSNTG 110
G+HPH+A W+E+ L L+ +
Sbjct: 61 GVHPHDAHRWNENSAADLEPLLRSPA 86
>sp|C6DI71|TATD_PECCP Tat-linked quality control protein TatD OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=tatD PE=3
SV=1
Length = 260
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 56/83 (67%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F +D E VV RAK +GV I+ G++ + S++A+ LA+ YP +STA
Sbjct: 1 MFDIGVNLTSSQFEKDREQVVIRAKQAGVSGILITGTNAQESQQAMLLAQAYPDYCWSTA 60
Query: 85 GIHPHEAKSWDEDYIDQLRDLVS 107
G+HPH+A W++ +Q+ + S
Sbjct: 61 GVHPHDASQWNDAVAEQIHHMAS 83
>sp|D0KC77|TATD_PECWW Tat-linked quality control protein TatD OS=Pectobacterium wasabiae
(strain WPP163) GN=tatD PE=3 SV=1
Length = 260
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 53/78 (67%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F +D E VV RAK +GV I+ G++ + S +A+ LA+ YP +STA
Sbjct: 1 MFDIGVNLTSSQFEQDREQVVIRAKQAGVSGILITGTNAQESHQAMLLAQAYPDYCWSTA 60
Query: 85 GIHPHEAKSWDEDYIDQL 102
G+HPH+A W+ D +Q+
Sbjct: 61 GVHPHDASQWNGDIAEQV 78
>sp|Q6DAQ1|TATD_ERWCT Tat-linked quality control protein TatD OS=Erwinia carotovora
subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
GN=tatD PE=3 SV=1
Length = 260
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F +D E VV RAK +GV I+ G++ + S +A+ LA+ YP +STA
Sbjct: 1 MFDIGVNLTSSQFEKDREQVVIRAKLAGVSGILITGTNAQESHQAMLLAQAYPDYCWSTA 60
Query: 85 GIHPHEAKSWDEDYIDQLRDLV 106
G+HPH+A W++ +QL +
Sbjct: 61 GVHPHDASQWNDAIAEQLHQMA 82
>sp|A8G8C4|TATD_SERP5 Tat-linked quality control protein TatD OS=Serratia proteamaculans
(strain 568) GN=tatD PE=3 SV=1
Length = 260
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 55/85 (64%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F +D +VV+RA+ +GV ++ G+ L+ S+ A LA+ + +STA
Sbjct: 1 MFDIGVNLTSSQFAKDRPAVVERARAAGVTGLLITGTDLQESRAASELAQQHANFCWSTA 60
Query: 85 GIHPHEAKSWDEDYIDQLRDLVSNT 109
G+HPH A SWDE +Q+ +L +
Sbjct: 61 GVHPHHASSWDERVAEQICELAARP 85
>sp|E1SKR8|TATD_PANVC Tat-linked quality control protein TatD OS=Pantoea vagans (strain
C9-1) GN=tatD PE=3 SV=1
Length = 260
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F D + VV+RA+D+GV ++ G++ S+ A RLA PG +STA
Sbjct: 1 MFDIGVNLTSTQFASDRQKVVKRARDAGVTGMLITGTNALESQHAQRLAEAQPGFCWSTA 60
Query: 85 GIHPHEAKSWDEDYIDQLRDLV 106
G+HPH A W + LR L
Sbjct: 61 GVHPHHASEWSTEIASTLRRLA 82
>sp|C6C4V4|TATD_DICDC Tat-linked quality control protein TatD OS=Dickeya dadantii (strain
Ech703) GN=tatD PE=3 SV=1
Length = 264
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F D ++V+ RA+ GV ++ G+ ++ S+ ALRLA PG +STA
Sbjct: 1 MFDIGVNLTSSQFESDRDAVISRARREGVTGMLLTGTGIEESRHALRLAEGAPGYCWSTA 60
Query: 85 GIHPHEAKSWDEDYIDQLRDLV 106
GIHPHEA +W + +R L
Sbjct: 61 GIHPHEASTWTDAAALSIRQLA 82
>sp|B2VG45|TATD_ERWT9 Tat-linked quality control protein TatD OS=Erwinia tasmaniensis
(strain DSM 17950 / Et1/99) GN=tatD PE=3 SV=1
Length = 259
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F +D + V++RA+++GV ++ G++ S++AL LAR +P +STA
Sbjct: 1 MFDIGVNLTSTQFAKDRDKVIKRAREAGVSGMLITGTNALESQQALSLARQHPDYCWSTA 60
Query: 85 GIHPHEAKSWDEDYIDQLRDLVSNT 109
G+HPH A W + LR L +
Sbjct: 61 GVHPHHASEWSGETAATLRRLAESP 85
>sp|E0SLH6|TATD_DICD3 Tat-linked quality control protein TatD OS=Dickeya dadantii (strain
3937) GN=tatD PE=3 SV=1
Length = 264
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F D E VV RA+ +GV ++ G+S++ S++A LA YP STA
Sbjct: 1 MFDIGVNLTSSQFRSDREQVVARARQAGVTGLLLTGTSVEESEQACLLAAQYPDYCGSTA 60
Query: 85 GIHPHEAKSWDEDYIDQLRDLVS 107
G+HPH+A W++D D + L
Sbjct: 61 GVHPHDASGWNDDTADLIHQLAG 83
>sp|B1JP69|TATD_YERPY Tat-linked quality control protein TatD OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=tatD
PE=3 SV=1
Length = 260
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F +D VV RAK++GV I+ G+ S A LA YPG +ST
Sbjct: 1 MFDIGVNLTSVQFAKDYHQVVNRAKEAGVLGILITGTDADESLAAQTLAAEYPGYCWSTT 60
Query: 85 GIHPHEAKSWDEDYIDQLRDLVSNT 109
G+HPH A SW + ++R L +
Sbjct: 61 GVHPHHASSWQDSVEQKIRTLAATA 85
>sp|D8MKW4|TATD_ERWBE Tat-linked quality control protein TatD OS=Erwinia billingiae
(strain Eb661) GN=tatD PE=3 SV=1
Length = 261
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F +D + VV+RAKD+G+ ++ G++ S++A LA PG +STA
Sbjct: 1 MFDIGVNLTSTQFAKDRDQVVKRAKDAGITGLLITGTNALESQQAQSLATRRPGYCWSTA 60
Query: 85 GIHPHEAKSWDEDYIDQLRDLVSNT 109
G+HPH A W + L+ L +
Sbjct: 61 GVHPHHASEWSGETAATLKRLAESP 85
>sp|D4ICL5|TATD_ERWAE Tat-linked quality control protein TatD OS=Erwinia amylovora
(strain ATCC 49946 / CCPPB 0273 / Ea273 / 27-3) GN=tatD
PE=3 SV=1
Length = 259
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F +D + VV+RA+++G+ ++ G++ S++AL LAR + +STA
Sbjct: 1 MFDIGVNLTSTQFAKDRDKVVKRAREAGISGMLITGTNALESQQALSLARQHANYCWSTA 60
Query: 85 GIHPHEAKSWDEDYIDQLRDLVSNT 109
G+HPH A W + LR L +
Sbjct: 61 GVHPHHASEWSAETAATLRRLAESP 85
>sp|C9XTA5|TATD_CROTZ Tat-linked quality control protein TatD OS=Cronobacter turicensis
(strain DSM 18703 / LMG 23827 / z3032) GN=tatD PE=3 SV=2
Length = 263
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G N+T+ +F D + ++ RA+ +GV ++ G+SL+ S A AR Y G +STA
Sbjct: 1 MFDIGLNITSSQFDHDRDEMIARARAAGVDSMLFTGTSLEESDRACAFARRYAG-CWSTA 59
Query: 85 GIHPHEAKSWDEDYIDQLRDLVSNT 109
G+HPH+A +W+++ +LR L S
Sbjct: 60 GVHPHDASTWNDESAARLRALASEP 84
>sp|D4GGR2|TATD_PANAM Tat-linked quality control protein TatD OS=Pantoea ananatis (strain
LMG 20103) GN=tatD PE=3 SV=2
Length = 260
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F D E V+ RA+++GV ++ G++ S++A +LA + +STA
Sbjct: 1 MFDIGVNLTSTQFASDREKVISRAREAGVTGMLITGTNALESQQAQKLAEAHQDYCWSTA 60
Query: 85 GIHPHEAKSWDEDYIDQLRDLV 106
G+HPH A W D + LR L
Sbjct: 61 GVHPHHASEWSADVANTLRRLA 82
>sp|A7MQN1|TATD_CROS8 Tat-linked quality control protein TatD OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=tatD PE=3 SV=2
Length = 263
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G N+T+ +F D + ++ RA+ +GV ++ G+SL+ S++A AR Y G +STA
Sbjct: 1 MFDIGLNITSSQFDHDRDEMIARARAAGVSNMLFTGTSLEESEKACAFARRYEG-CWSTA 59
Query: 85 GIHPHEAKSWDEDYIDQLRDLVSNT 109
G+HPH+A +W+++ +LR L
Sbjct: 60 GVHPHDASTWNDESAARLRALAGEA 84
>sp|Q9L6M2|TATD_SALTY Tat-linked quality control protein TatD OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=tatD PE=3 SV=1
Length = 260
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F +D + VV RA +GV+ ++ G+++ S++AL+LAR YP +STA
Sbjct: 1 MFDIGVNLTSSQFAKDRDDVVARAFAAGVKGMLLTGTNIHESQQALKLARRYP-HCWSTA 59
Query: 85 GIHPHEAKSW 94
G+HPH++ W
Sbjct: 60 GVHPHDSSQW 69
>sp|B5XYH5|TATD_KLEP3 Tat-linked quality control protein TatD OS=Klebsiella pneumoniae
(strain 342) GN=tatD PE=3 SV=1
Length = 263
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F RD + VV RA+ +GV ++ G++L S++A R+A Y G +STA
Sbjct: 1 MFDIGVNLTSSQFSRDHDEVVARARAAGVHGMLLTGTNLPESQQAQRMASHYSG-CWSTA 59
Query: 85 GIHPHEAKSW 94
G+HPH+ SW
Sbjct: 60 GVHPHDGSSW 69
>sp|Q0SZ31|TATD_SHIF8 Tat-linked quality control protein TatD OS=Shigella flexneri
serotype 5b (strain 8401) GN=tatD PE=3 SV=1
Length = 260
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F +D + VV RA D+GV ++ G++L+ S++A +LAR Y +STA
Sbjct: 1 MFDIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQAQKLARQY-SSCWSTA 59
Query: 85 GIHPHEAKSW 94
G+HPH++ W
Sbjct: 60 GVHPHDSSQW 69
>sp|B7LTZ5|TATD_ESCF3 Tat-linked quality control protein TatD OS=Escherichia fergusonii
(strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=tatD
PE=3 SV=1
Length = 260
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F +D + +V RA +GV ++ G++L+ S++A +LAR YP +STA
Sbjct: 1 MFDIGVNLTSSQFAKDRDDIVTRAFAAGVNGLLITGTNLRESQQAQKLARHYP-HCWSTA 59
Query: 85 GIHPHEAKSW 94
G+HPH++ W
Sbjct: 60 GVHPHDSSQW 69
>sp|D2TUZ4|TATD_CITRI Tat-linked quality control protein TatD OS=Citrobacter rodentium
(strain ICC168) GN=tatD PE=3 SV=1
Length = 263
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F +D + VV RA +GV ++ G++L S++A RLA+ YP +STA
Sbjct: 1 MFDIGVNLTSSQFVKDHDEVVARAYAAGVNGLLLTGTNLYESQQAQRLAQHYP-HCWSTA 59
Query: 85 GIHPHEAKSWDED 97
G+HPH++ W D
Sbjct: 60 GVHPHDSSEWRAD 72
>sp|E3G381|TATD_ENTCS Tat-linked quality control protein TatD OS=Enterobacter cloacae
(strain SCF1) GN=tatD PE=3 SV=1
Length = 260
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F RD ++VV RA +G+ ++ G+SL S++AL LA+ + +STA
Sbjct: 1 MFDIGVNLTSPQFARDHDAVVARAFAAGLSGMLLTGTSLHESEQALALAQRH-ARCWSTA 59
Query: 85 GIHPHEAKSWDEDYIDQLRDL-----VSNTGNSTMNRYNSSQWITEIKQTLFTTFVDITA 139
G+HPH++ W + ++R L V G ++ +N + + ++ F+ + + A
Sbjct: 60 GVHPHDSSRWTRETEQRIRTLAQAPEVVAIGECGLD-FNRNFSTPQAQEAAFSAQLALAA 118
Query: 140 LC 141
C
Sbjct: 119 EC 120
>sp|E8XYF5|TATD_RAHSY Tat-linked quality control protein TatD OS=Rahnella sp. (strain
Y9602) GN=tatD PE=3 SV=1
Length = 263
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ ++G NLT+ +F +D VV+RA+ +G+ ++ G+S + S EA ++A +P +STA
Sbjct: 1 MFEIGINLTSSQFDKDRLQVVERARTAGLSGMLITGTSAQESVEAQKMADEHPDFCWSTA 60
Query: 85 GIHPHEAKSWDEDYIDQLRDLV 106
G+HPH+A W+ +R+L
Sbjct: 61 GVHPHQASHWNAQVEAGIRELA 82
>sp|P27859|TATD_ECOLI Tat-linked quality control protein TatD OS=Escherichia coli
(strain K12) GN=tatD PE=1 SV=3
Length = 260
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F +D + VV A D+GV ++ G++L+ S++A +LAR Y +STA
Sbjct: 1 MFDIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQY-SSCWSTA 59
Query: 85 GIHPHEAKSW 94
G+HPH++ W
Sbjct: 60 GVHPHDSSQW 69
>sp|A8ACY8|TATD_CITK8 Tat-linked quality control protein TatD OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=tatD
PE=3 SV=2
Length = 260
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F +D + VV RA +GV ++ G++L S++A +LA+ Y +STA
Sbjct: 1 MFDIGVNLTSSQFVKDRDDVVTRALAAGVSGMLLTGTNLHESQQAQKLAQRY-ACCWSTA 59
Query: 85 GIHPHEAKSWDEDYIDQL 102
G+HPH++ W + D +
Sbjct: 60 GVHPHDSSQWQSETEDAI 77
>sp|A4WFX9|TATD_ENT38 Tat-linked quality control protein TatD OS=Enterobacter sp. (strain
638) GN=tatD PE=3 SV=2
Length = 260
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
+ D+G NLT+ +F D + VV RA +GV+ ++ G++L S+ A +LA+ Y +STA
Sbjct: 1 MFDIGLNLTSPQFANDRDDVVARAFAAGVKGLLLTGTNLHESEHAQQLAQGYE-RCWSTA 59
Query: 85 GIHPHEAKSWDEDYIDQLRDLV 106
G+HPH++ W ++ + L L
Sbjct: 60 GVHPHDSSQWTDESAETLYKLA 81
>sp|Q6P1N9|TATD1_HUMAN Putative deoxyribonuclease TATDN1 OS=Homo sapiens GN=TATDN1 PE=1
SV=2
Length = 297
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 15/100 (15%)
Query: 23 YVLIDVGANLTNRKF----------GRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRL 72
+ ID+G NLT+ F DL+ V+ RA + GV+K + G +L+ SK+AL L
Sbjct: 4 FKFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDALHL 63
Query: 73 ARIYPGMVYSTAGIHPHEAKSWDED----YIDQLRDLVSN 108
A+ GM +ST G HP ++++ Y+ +L +L N
Sbjct: 64 AQTN-GMFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAEN 102
>sp|Q6P8M1|TATD1_MOUSE Putative deoxyribonuclease TATDN1 OS=Mus musculus GN=Tatdn1 PE=2
SV=1
Length = 295
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 23 YVLIDVGANLTNRKF----------GRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRL 72
+ +D+G NLT+ F DL+ V++RA GV+K + G SL+ SK+AL+L
Sbjct: 4 FKFVDIGINLTDPMFRGIYRGVQKHQDDLQDVIERAIQIGVKKFMITGGSLQDSKDALQL 63
Query: 73 ARIYPGMVYSTAGIHPHEAKSWDEDYIDQ 101
A+ M +ST G HP +++ DQ
Sbjct: 64 AQTN-DMFFSTVGCHPTRCDEFEKGSPDQ 91
>sp|Q640V9|TATD1_XENLA Putative deoxyribonuclease TATDN1 OS=Xenopus laevis GN=tatdn1 PE=2
SV=1
Length = 297
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 15/100 (15%)
Query: 23 YVLIDVGANLTN----------RKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRL 72
Y ID+G NLT+ RK D +++RA +GVQK + G +L SKEA++L
Sbjct: 4 YRFIDIGINLTDPMFRGLYRGTRKHQDDFADIIERAVRTGVQKFMITGGNLHESKEAIQL 63
Query: 73 ARIYPGMVYSTAGIHP---HEAKSWDED-YIDQLRDLVSN 108
A+ YST G HP E + D D Y+ +L++L+ +
Sbjct: 64 AQ-SNDRFYSTVGCHPTRCGEFEQGDPDQYLAELQNLLED 102
>sp|Q6GML7|TATD1_DANRE Putative deoxyribonuclease TATDN1 OS=Danio rerio GN=tatdn1 PE=2
SV=1
Length = 298
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 22 NYVLIDVGANLTNRKF----------GRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALR 71
N+ ID+G NLT+ F D VV+RA GVQK I G +L+ S+ AL
Sbjct: 3 NFRFIDIGINLTDPMFRGVYRGTQKHEDDFAEVVERALQVGVQKFIITGGNLEDSRAALT 62
Query: 72 LARIYPGMVYSTAGIHPHEAKSWD----EDYIDQLRDL-VSNT 109
L +ST G HP +D + Y+ L DL VSNT
Sbjct: 63 LTHTRE-QFFSTVGCHPTRCSEFDDQGSDQYLSSLLDLTVSNT 104
>sp|Q148G4|TATD1_BOVIN Putative deoxyribonuclease TATDN1 OS=Bos taurus GN=TATDN1 PE=2 SV=1
Length = 297
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 16/103 (15%)
Query: 23 YVLIDVGANLTNRKF----------GRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRL 72
+ +D+G NLT+ F DL+ V++RA GV+K + G +L+ SK+AL L
Sbjct: 4 FKFVDIGINLTDPMFRGIYRGVQKHQDDLQDVIERAVQIGVKKFMITGGNLQDSKDALHL 63
Query: 73 ARIYPGMVYSTAGIHPHEAKSWDED----YIDQLRDLV-SNTG 110
A+ M +ST G HP ++++ Y+ +L +L SN G
Sbjct: 64 AQTN-DMFFSTVGCHPTRCDEFEKNDPDHYLMELLNLAESNKG 105
>sp|Q503T5|TATD3_DANRE Putative deoxyribonuclease tatdn3 OS=Danio rerio GN=tatdn3 PE=2
SV=1
Length = 266
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
ID +++ +F D + V+ RAK +GV+ ++A+ ++ ++L++ YPG V+
Sbjct: 5 FIDCHCHISASEFTTDTDDVLLRAKKAGVKALVAVTEGASEFEKVIQLSKTYPGFVFPCF 64
Query: 85 GIHPHEAKSWD 95
GIHP + D
Sbjct: 65 GIHPLQGSGQD 75
>sp|Q9UUF1|YNF8_SCHPO Deoxyribonuclease Tat-D OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pi038 PE=3 SV=1
Length = 312
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 18/103 (17%)
Query: 27 DVGANLTNRKF----------GRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIY 76
D+G N T+ F D +S++ RAK GV+K++ G ++++S+EAL LA Y
Sbjct: 16 DIGYNATDPVFRGIYHEKLKHPDDFDSIISRAKAVGVEKMMITGDNVENSEEALNLATNY 75
Query: 77 PGMVYSTAGIHPHEAKSW------DEDYIDQLRDLVSNTGNST 113
ST G+HP +A+ + EDY+ +L L +N G ++
Sbjct: 76 ECFT-STVGVHPCQAQCFLRHSEGPEDYLVKLEAL-ANKGKAS 116
>sp|Q8SW70|TATD1_ENCCU Putative deoxyribonuclease TATDN1 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU03_0200 PE=3 SV=1
Length = 273
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 20/139 (14%)
Query: 24 VLIDVGANLTNRKFGRD---LESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMV 80
+LID+ N+T++ +D +E V++R KDS V I G ++SK + LA+ Y +
Sbjct: 1 MLIDIAVNITDKLLAKDESSVEEVIRRCKDSKVLPIFT-GLDHQTSKICINLAKKYKTV- 58
Query: 81 YSTAGIHPHEAKSWDEDYIDQLRDLVSN-----TGNSTMNRYNSSQWITEIKQT-LFTTF 134
STAGIHP + + ID++ LV++ G ++ Y+ ++ ++ Q +F +
Sbjct: 59 -STAGIHPTSSSRYSN--IDEIVPLVNDETVVAIGECGLD-YDRLEFADKVSQKRIFRSQ 114
Query: 135 VDITALCEF-----CQKNF 148
+D+ C F C ++F
Sbjct: 115 LDLGGSCYFFHSRSCHRDF 133
>sp|P37545|YABD_BACSU Uncharacterized deoxyribonuclease YabD OS=Bacillus subtilis (strain
168) GN=yabD PE=3 SV=1
Length = 255
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 24 VLIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYST 83
+L D A+L ++ DLE V++RAK V++I+ +G + A+ + Y +Y+
Sbjct: 1 MLFDTHAHLNAEQYDTDLEEVIERAKAEKVERIVVVGFDRPTITRAMEMIEEY-DFIYAA 59
Query: 84 AGIHPHEAKSWDEDYIDQLRDL 105
G HP +A E+ + +++L
Sbjct: 60 IGWHPVDAIDMTEEDLAWIKEL 81
>sp|A1A4M4|TATD3_BOVIN Putative deoxyribonuclease TATDN3 OS=Bos taurus GN=TATDN3 PE=2 SV=1
Length = 273
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
L+D +L+ F DL+ V+++AK++ V ++ + ++ ++L++ Y G V
Sbjct: 8 LVDCHCHLSAPDFDHDLDDVLKKAKEANVMALVVVAEHSGEFEKIMQLSQRYNGFVLPCL 67
Query: 85 GIHPHEAKSWDEDYIDQLRDL 105
G+HP + S ++ L+DL
Sbjct: 68 GVHPVQGVSPEDQRSVTLKDL 88
>sp|Q05AV0|TAT3A_XENLA Putative deoxyribonuclease tatdn3-A OS=Xenopus laevis GN=tatdn3-a
PE=2 SV=1
Length = 270
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 36/63 (57%)
Query: 26 IDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTAG 85
+D ++T +F +D E V++ +K++G+Q +I++ ++ + L+ YP + G
Sbjct: 6 VDCHCHMTAEEFSQDTEEVIEESKENGIQALISVTEHGGEFEKLIYLSDRYPDYIMPCFG 65
Query: 86 IHP 88
IHP
Sbjct: 66 IHP 68
>sp|Q6GPM3|TAT3B_XENLA Putative deoxyribonuclease tatdn3-B OS=Xenopus laevis GN=tatdn3-b
PE=2 SV=1
Length = 255
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%)
Query: 22 NYVLIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVY 81
+ VL+D +LT +F D+ SV++ AK G+ ++A+ ++ + L+R G+V+
Sbjct: 4 SVVLVDCHWHLTASEFDHDIGSVLEDAKTIGLCALVAVAEHSGEFEKVIELSRRNAGLVF 63
Query: 82 STAGIHPHEAKSWDEDYIDQLRDL 105
G+HP + + L+D+
Sbjct: 64 PCLGVHPVQGSATGPQRSATLQDV 87
>sp|Q3U1C6|TATD3_MOUSE Putative deoxyribonuclease TATDN3 OS=Mus musculus GN=Tatdn3 PE=2
SV=1
Length = 294
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 25 LIDVGANLTNRKFGRDLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTA 84
L+D +L+ F DL+ V+++A+ + V ++A+ + ++L+ Y G V
Sbjct: 5 LVDCHCHLSASDFDNDLDDVLEKARKANVMALVAVAEHAGEFERIMQLSERYNGFVLPCL 64
Query: 85 GIHPHEAKSWDEDYIDQLRDL 105
G+HP + S ++ L+DL
Sbjct: 65 GVHPVQELSPEKPRSVTLKDL 85
>sp|P45305|Y1664_HAEIN Uncharacterized deoxyribonuclease HI_1664 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1664
PE=3 SV=1
Length = 251
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 42 ESVVQRAKDSGVQKIIAIGSSLKSSKEALRLARIYPGMVYSTAGIHP-HEAKSWDE---- 96
E++ Q S + ++A+ ++L S+K+ L L + YP +Y AG HP + S +E
Sbjct: 15 ENIQQTLAHSKIIGMLAVSTNLNSAKKLLNLKQTYPKKLYIAAGFHPEQQLPSLEEQKKL 74
Query: 97 -DYIDQLRDLVSNTGNSTMNRYN 118
+ID+ +S G + Y+
Sbjct: 75 FQWIDEHHSSISAIGEVGLPHYS 97
>sp|P47255|Y009_MYCGE Uncharacterized deoxyribonuclease MG009 OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=MG009 PE=3
SV=1
Length = 262
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Query: 58 AIGSSLKSSKEALRLARIYPGMVYSTAGIHPHEA---------KSWDEDYIDQLRDLVSN 108
+G+ L +SK A+ LA+ YP ++ +T GIHP++ K +E I+ R+ +S
Sbjct: 35 VVGTDLDNSKIAVELAKKYPDLLKATIGIHPNDVHLVDFKKTKKQLNELLINN-RNFISC 93
Query: 109 TGNSTMNRYNSSQWITEIKQTLF 131
G + + ++++I E++ F
Sbjct: 94 IGEYGFDYHYTTEFI-ELQNKFF 115
>sp|Q98FG0|ISPG_RHILO 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Rhizobium
loti (strain MAFF303099) GN=ispG PE=3 SV=1
Length = 417
Score = 37.7 bits (86), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 11/118 (9%)
Query: 37 FGRDLESVVQRAKDSGVQKIIAIGSSLKS-SKEALRLARIYPGMVYSTAGIHPHEAKS-- 93
GRD ++ AK SGVQ +IA+ + L + S AL L GM + GI A
Sbjct: 200 LGRD--KIILSAKVSGVQDLIAVYTELATRSDHALHLGLTEAGM--GSKGIVASSAAMGI 255
Query: 94 -WDEDYIDQLRDLVSNTGNSTMNRYNSSQWITEIKQTL-FTTFVDITALCEFCQKNFS 149
+ D +R +S T +R Q E+ QT+ F FV I A C C + S
Sbjct: 256 LLQQGIGDTIR--ISLTPEPNGDRTREVQVAQELLQTMGFRQFVPIVAACPGCGRTTS 311
>sp|Q8BID6|ZBT46_MOUSE Zinc finger and BTB domain-containing protein 46 OS=Mus musculus
GN=Zbtb46 PE=1 SV=2
Length = 600
Score = 36.6 bits (83), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 141 CEFCQKNFSRKEHLNRHLWVH 161
CE C K F+R+EH+ RH VH
Sbjct: 448 CEICGKKFTRREHMKRHTLVH 468
>sp|Q873X0|PACC_GIBMO pH-response transcription factor pacC/RIM101 OS=Gibberella
moniliformis GN=PAC1 PE=3 SV=1
Length = 613
Score = 36.2 bits (82), Expect = 0.12, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 108 NTGNSTMNRYN-SSQW----ITEIKQTLFTTFVDITA-----LCEFCQKNFSRKEHLNRH 157
+ G + N N + QW T +K+ T+ + + CEFC K+F R + L +H
Sbjct: 89 HVGRKSTNNLNLTCQWNSCRTTTVKRDHITSHIRVHVPLKPHKCEFCGKSFKRPQDLKKH 148
Query: 158 LWVHKDSSMM 167
+ H D S++
Sbjct: 149 VKTHADDSVL 158
>sp|Q96X49|PACC_ACRCH pH-response transcription factor pacC/RIM101 OS=Acremonium
chrysogenum GN=pacC PE=1 SV=1
Length = 621
Score = 35.8 bits (81), Expect = 0.12, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 108 NTGNSTMNRYN-SSQW----ITEIKQTLFTTFVDITA-----LCEFCQKNFSRKEHLNRH 157
+ G + N N + QW T +K+ T+ + + CEFC K+F R + L +H
Sbjct: 78 HVGRKSTNNLNLTCQWNSCRTTTVKRDHITSHIRVHVPLKPHKCEFCGKSFKRPQDLKKH 137
Query: 158 LWVHKDSSMM 167
+ H D S++
Sbjct: 138 VKTHADDSVL 147
>sp|Q2I689|PLAL1_PIG Zinc finger protein PLAGL1 OS=Sus scrofa GN=PLAGL1 PE=2 SV=1
Length = 463
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 140 LCEFCQKNFSRKEHLNRHLWVHKDSSMMKE 169
LC+FC + F RK+HL RH +MKE
Sbjct: 185 LCQFCAQRFGRKDHLTRHTKKTHSQELMKE 214
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 141 CEFCQKNFSRKEHLNRHLWVHKDSSM 166
C C+K F+RK+HL HL H + M
Sbjct: 64 CAHCEKTFNRKDHLKNHLQTHDPNKM 89
>sp|Q9UM63|PLAL1_HUMAN Zinc finger protein PLAGL1 OS=Homo sapiens GN=PLAGL1 PE=1 SV=2
Length = 463
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 140 LCEFCQKNFSRKEHLNRHLWVHKDSSMMKE 169
LC+FC + F RK+HL RH +MKE
Sbjct: 185 LCQFCAQRFGRKDHLTRHTKKTHSQELMKE 214
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 141 CEFCQKNFSRKEHLNRHLWVHKDSSM 166
C C+K F+RK+HL HL H + M
Sbjct: 64 CAHCEKTFNRKDHLKNHLQTHDPNKM 89
>sp|Q96N77|ZN641_HUMAN Zinc finger protein 641 OS=Homo sapiens GN=ZNF641 PE=1 SV=2
Length = 438
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 105 LVSNTGNSTMNRYN-SSQWITEIKQTLFTTFVDITALCEFCQKNFSRKEHLNRHLWVHKD 163
+ + G S R++ W+T + F C C+K+F RK HL+RHL H+
Sbjct: 373 VCTECGKSFGRRHHLVRHWLTHTGEKPFQ--------CPRCEKSFGRKHHLDRHLLTHQG 424
Query: 164 SS 165
S
Sbjct: 425 QS 426
>sp|P34220|YBF5_YEAST Deoxyribonuclease Tat-D OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YBL055C PE=1 SV=1
Length = 418
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 14/76 (18%)
Query: 27 DVGANLTNRKF-----GR-----DLESVVQRAKDSGVQKIIAIGSSLKSSKEALRLAR-- 74
D+G NLT+ F G+ D +++RA V+ + GSS+ S+ A+ L
Sbjct: 40 DIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTGSSIAESQSAIELVSSV 99
Query: 75 --IYPGMVYSTAGIHP 88
+ P +Y T G+HP
Sbjct: 100 KDLSPLKLYHTIGVHP 115
>sp|Q9WTY8|ZBT10_RAT Zinc finger and BTB domain-containing protein 10 OS=Rattus
norvegicus GN=Zbtb10 PE=2 SV=1
Length = 836
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 141 CEFCQKNFSRKEHLNRHLWVHK 162
CE C K F+R+EH+ RH VHK
Sbjct: 719 CEICGKMFTRREHVKRHSLVHK 740
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.128 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,138,938
Number of Sequences: 539616
Number of extensions: 2182245
Number of successful extensions: 14571
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 13629
Number of HSP's gapped (non-prelim): 952
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)