BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4674
(173 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91YE3|EGLN1_MOUSE Egl nine homolog 1 OS=Mus musculus GN=Egln1 PE=2 SV=2
Length = 400
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 54/81 (66%), Gaps = 8/81 (9%)
Query: 55 EVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVDAIIM 114
EV ++ +G F DGQLVS KS + +D IRGDQITWI+G+E C IG L+S +D +I
Sbjct: 202 EVRALHDTGKFTDGQLVSQKSDSSKD---IRGDQITWIEGKEPGCETIGLLMSSMDDLIR 258
Query: 115 RANRMVNNGRMGDFVINGRTK 135
+G++G++ INGRTK
Sbjct: 259 HC-----SGKLGNYRINGRTK 274
>sp|Q96KS0|EGLN2_HUMAN Egl nine homolog 2 OS=Homo sapiens GN=EGLN2 PE=1 SV=1
Length = 407
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 8/84 (9%)
Query: 52 VLHEVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVDA 111
VL EV + G +DGQLVS ++ ++IRGDQI W++G E C +IG L++ VDA
Sbjct: 206 VLAEVEALKRGGRLRDGQLVSQRAIPP---RSIRGDQIAWVEGHEPGCRSIGALMAHVDA 262
Query: 112 IIMRANRMVNNGRMGDFVINGRTK 135
+I GR+G +VINGRTK
Sbjct: 263 VIRHC-----AGRLGSYVINGRTK 281
>sp|Q9GZT9|EGLN1_HUMAN Egl nine homolog 1 OS=Homo sapiens GN=EGLN1 PE=1 SV=1
Length = 426
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 8/81 (9%)
Query: 55 EVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVDAIIM 114
EV ++ +G F DGQLVS KS + +D IRGD+ITWI+G+E C IG L+S +D +I
Sbjct: 225 EVRALHDTGKFTDGQLVSQKSDSSKD---IRGDKITWIEGKEPGCETIGLLMSSMDDLIR 281
Query: 115 RANRMVNNGRMGDFVINGRTK 135
NG++G + INGRTK
Sbjct: 282 HC-----NGKLGSYKINGRTK 297
>sp|Q91YE2|EGLN2_MOUSE Egl nine homolog 2 OS=Mus musculus GN=Egln2 PE=2 SV=2
Length = 419
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
Query: 52 VLHEVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVDA 111
VL EV + G +DGQLVS ++ ++IRGDQI W++G E C +IG L++ VDA
Sbjct: 218 VLAEVEALKWGGRLRDGQLVSQRAIPP---RSIRGDQIAWVEGHEPGCRSIGALMAHVDA 274
Query: 112 IIMRANRMVNNGRMGDFVINGRTK 135
+I GR+G++VINGRTK
Sbjct: 275 VIRHC-----AGRLGNYVINGRTK 293
>sp|Q6AYU4|EGLN2_RAT Egl nine homolog 2 OS=Rattus norvegicus GN=Egln2 PE=2 SV=1
Length = 415
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
Query: 52 VLHEVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVDA 111
VL EV + G +DGQLVS ++ ++IRGDQI W++G E C +IG L++ VDA
Sbjct: 214 VLAEVEALKWGGRLRDGQLVSQRAIPP---RSIRGDQIAWVEGHEPGCRSIGALMAHVDA 270
Query: 112 IIMRANRMVNNGRMGDFVINGRTK 135
+I GR+G++VINGRTK
Sbjct: 271 VIRHC-----AGRLGNYVINGRTK 289
>sp|P59722|EGLN1_RAT Egl nine homolog 1 OS=Rattus norvegicus GN=Egln1 PE=2 SV=1
Length = 222
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 8/81 (9%)
Query: 55 EVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVDAIIM 114
EV ++ +G F DGQLVS KS + +D IRGD+ITWI+G+E C IG L+S +D +I
Sbjct: 24 EVRALHDTGKFTDGQLVSQKSDSSKD---IRGDKITWIEGKEPGCETIGLLMSSMDDLIR 80
Query: 115 RANRMVNNGRMGDFVINGRTK 135
+G++G++ INGRTK
Sbjct: 81 HC-----SGKLGNYRINGRTK 96
>sp|Q62630|EGLN3_RAT Egl nine homolog 3 OS=Rattus norvegicus GN=Egln3 PE=1 SV=2
Length = 239
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 51 AVLHEVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVD 110
VL V ++++G +DGQL ++ + + +RGDQITWI G E C I L+S +D
Sbjct: 42 CVLERVKQLHYNGALRDGQLAGPRAGVSK--RHLRGDQITWIGGNEEGCEAINFLLSLID 99
Query: 111 AIIMRANRMVNNGRMGDFVINGRTK 135
+++ R+G + + R+K
Sbjct: 100 RLVLYC-----GSRLGKYYVKERSK 119
>sp|Q91UZ4|EGLN3_MOUSE Egl nine homolog 3 OS=Mus musculus GN=Egln3 PE=2 SV=1
Length = 239
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 51 AVLHEVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVD 110
VL V ++++G +DGQL ++ + + +RGDQITWI G E C I L+S +D
Sbjct: 42 CVLERVKQLHYNGALRDGQLAGPRAGVSK--RHLRGDQITWIGGNEEGCEAINFLLSLID 99
Query: 111 AIIMRANRMVNNGRMGDFVINGRTK 135
+++ R+G + + R+K
Sbjct: 100 RLVLYC-----GSRLGKYYVKERSK 119
>sp|Q9H6Z9|EGLN3_HUMAN Egl nine homolog 3 OS=Homo sapiens GN=EGLN3 PE=1 SV=1
Length = 239
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 51 AVLHEVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVD 110
VL V ++ +G +DGQL ++ + + +RGDQITWI G E C I L+S +D
Sbjct: 42 CVLERVKQLHCTGALRDGQLAGPRAGVSK--RHLRGDQITWIGGNEEGCEAISFLLSLID 99
Query: 111 AIIMRANRMVNNGRMGDFVINGRTK 135
+++ R+G + + R+K
Sbjct: 100 RLVLYC-----GSRLGKYYVKERSK 119
>sp|B3CR62|MNMG_ORITI tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Orientia tsutsugamushi (strain Ikeda) GN=mnmG PE=3
SV=1
Length = 622
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 58 GMYHSGVFKDGQLVSNKST---NKQDLKTIRGDQIT--WIDGRETYCSNI----GRLISE 108
+Y S ++ N +T + +D+K I +++T ++G+E YC + G +S
Sbjct: 99 ALYKSAMYSTIMNYPNLTTIFASVEDIKVI-ANKVTAVIVNGKEIYCQKVILTTGTFLS- 156
Query: 109 VDAIIMRANRMVNNGRMGDFVINGRTKDSSEAGLQ-GMLESGELP 152
+I R + GR+G+ G + SE GL+ G L++G P
Sbjct: 157 --GVIHRGKEQIKAGRLGENASYGLSNTLSELGLRLGRLKTGTPP 199
>sp|A5CDS8|MNMG_ORITB tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Orientia tsutsugamushi (strain Boryong) GN=mnmG PE=3
SV=1
Length = 622
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 58 GMYHSGVFKDGQLVSNKST---NKQDLKTIRGDQIT--WIDGRETYCSNI----GRLISE 108
+Y S ++ N +T + +D+K I +++T ++G+E YC + G +S
Sbjct: 99 ALYKSAMYSTIMNYPNLTTIFASVEDIKVI-ANKVTAVIVNGKEIYCQKVILTTGTFLS- 156
Query: 109 VDAIIMRANRMVNNGRMGDFVINGRTKDSSEAGLQ-GMLESGELP 152
+I R + GR+G+ G + SE GL+ G L++G P
Sbjct: 157 --GVIHRGKEQIKAGRLGENASYGLSNTLSELGLRLGRLKTGTPP 199
>sp|P71543|CSOR_MYCTU Copper-sensing transcriptional repressor CsoR OS=Mycobacterium
tuberculosis GN=csoR PE=1 SV=2
Length = 119
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 69 QLVSNKSTNKQDLKTIRG--DQITWIDGRETYCSNIGRLISEVDAIIMRANR-MVNN 122
+L + K LKT+RG D I + + YC ++ + IS V + + RANR M++N
Sbjct: 4 ELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHN 60
>sp|A1QQ42|CSOR_MYCTF Copper-sensing transcriptional repressor CsoR OS=Mycobacterium
tuberculosis (strain F11) GN=csoR PE=3 SV=1
Length = 119
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 69 QLVSNKSTNKQDLKTIRG--DQITWIDGRETYCSNIGRLISEVDAIIMRANR-MVNN 122
+L + K LKT+RG D I + + YC ++ + IS V + + RANR M++N
Sbjct: 4 ELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHN 60
>sp|A1KHA2|CSOR_MYCBP Copper-sensing transcriptional repressor CsoR OS=Mycobacterium
bovis (strain BCG / Pasteur 1173P2) GN=csoR PE=3 SV=1
Length = 119
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 69 QLVSNKSTNKQDLKTIRG--DQITWIDGRETYCSNIGRLISEVDAIIMRANR-MVNN 122
+L + K LKT+RG D I + + YC ++ + IS V + + RANR M++N
Sbjct: 4 ELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHN 60
>sp|Q7U0Y5|CSOR_MYCBO Copper-sensing transcriptional repressor CsoR OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=csoR PE=3
SV=1
Length = 119
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 69 QLVSNKSTNKQDLKTIRG--DQITWIDGRETYCSNIGRLISEVDAIIMRANR-MVNN 122
+L + K LKT+RG D I + + YC ++ + IS V + + RANR M++N
Sbjct: 4 ELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHN 60
>sp|P37545|YABD_BACSU Uncharacterized deoxyribonuclease YabD OS=Bacillus subtilis (strain
168) GN=yabD PE=3 SV=1
Length = 255
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 150 ELPMDRILVESDAPFLYPN 168
E+P DR+L+E+D PFL P+
Sbjct: 192 EIPNDRLLIETDCPFLTPH 210
>sp|Q98Q06|RS13_MYCPU 30S ribosomal protein S13 OS=Mycoplasma pulmonis (strain UAB CTIP)
GN=rpsM PE=3 SV=1
Length = 132
Score = 30.8 bits (68), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 97 TYCSNIGRLISEVDAIIMRANRMVNNGRMGDFVINGRTKDSSEAGLQGMLESGE 150
TY IG+ +S+ II++AN + + F + R KD SE LQ + +S +
Sbjct: 20 TYILGIGKSLSK--EIIVKANEKLAKAKEKTFTEDSRVKDLSEEQLQAIRDSAK 71
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,467,576
Number of Sequences: 539616
Number of extensions: 2179252
Number of successful extensions: 4688
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4666
Number of HSP's gapped (non-prelim): 18
length of query: 173
length of database: 191,569,459
effective HSP length: 109
effective length of query: 64
effective length of database: 132,751,315
effective search space: 8496084160
effective search space used: 8496084160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)