Diaphorina citri psyllid: psy4674


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170---
MCVKPCWEFGIGHSQDRRASQPVGLALKGVFAFQKRKTKHKCASLVSFSMAVLHEVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVDAIIMRANRMVNNGRMGDFVINGRTKDSSEAGLQGMLESGELPMDRILVESDAPFLYPNARAAK
ccccccccccccccccccccccccccHHHHHHHHHccccccCEEHHHHHHHHHHHHHHHHHccccccccEEccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEcccccccccHHHHHHHccccccccEEEEEcccccccccccccc
**VKPCWEFGIGHS******QPVGLALKGVFAFQKRKTKHKCASLVSFSMAVLHEVLGMYHSGVFKDGQLVS*********KTIRGDQITWIDGRETYCSNIGRLISEVDAIIMRANRMVNNGRMGDFVINGRTKDSSEAGLQGMLESGELPMDRILVESDAPFLYPN*****
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MCVKPCWEFGIGHSQDRRASQPVGLALKGVFAFQKRKTKHKCASLVSFSMAVLHEVLGMYHSGVFKDGQLVSNKSTNKQDLKTIRGDQITWIDGRETYCSNIGRLISEVDAIIMRANRMVNNGRMGDFVINGRTKDSSEAGLQGMLESGELPMDRILVESDAPFLYPNARAAK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0031545 [MF]peptidyl-proline 4-dioxygenase activityprobableGO:0051213, GO:0016706, GO:0016705, GO:0003824, GO:0003674, GO:0031543, GO:0016491
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0018401 [BP]peptidyl-proline hydroxylation to 4-hydroxy-L-prolineprobableGO:0019752, GO:0006807, GO:0044281, GO:0043170, GO:1901360, GO:0044267, GO:0044710, GO:0044260, GO:0006520, GO:0018193, GO:0071704, GO:0046483, GO:1901605, GO:0009987, GO:0006464, GO:0032787, GO:0043412, GO:0036211, GO:0008150, GO:0008152, GO:0043436, GO:0018208, GO:0044238, GO:1901564, GO:0006575, GO:0006082, GO:0019538, GO:0019471, GO:0044237, GO:0019511

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3RCM, chain A
Confidence level:confident
Coverage over the Query: 76-173
View the alignment between query and template
View the model in PyMOL