RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4681
(1930 letters)
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Length = 190
Score = 126 bits (319), Expect = 4e-33
Identities = 67/191 (35%), Positives = 97/191 (50%), Gaps = 13/191 (6%)
Query: 339 FISRTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRADEMYKCDKC 398
+ G K + C C +++ + L H + H E + YKC +C
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGE-------KPYKCPEC 55
Query: 399 DKLFIEQSEMVQHRDWVH-GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCHICGK- 454
K F ++ ++ +H+ H G+K Y C CG ++NL+AH R HTGE+P C CGK
Sbjct: 56 GKSFSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKS 114
Query: 455 -KLRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAAR 513
L+ H THTGE+P+ C CG ++ + L H R HTGE+PY C CG SF+ R
Sbjct: 115 FSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRR 174
Query: 514 PAFNLHLKRHT 524
A N+H + HT
Sbjct: 175 DALNVHQRTHT 185
Score = 124 bits (314), Expect = 2e-32
Identities = 63/224 (28%), Positives = 90/224 (40%), Gaps = 45/224 (20%)
Query: 1100 SFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIG---YTV 1156
S S GE+P+ C ECG+SF+ HL +H R H G Y
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSD----HLAEH-----QRTHTGEKPYK- 51
Query: 1157 FCKECNIGFYSSTHLHSHGIKVH-GLPPFICEHCSKPFTSKGNLTVHVKYYHAKTLFECN 1215
C EC F L H + H G P+ C C K F+ + NL H + + + + C
Sbjct: 52 -CPECGKSFSDKKDLTRHQ-RTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACP 109
Query: 1216 ICLKTFNFKTSYKRHLKQHDDSVTYYPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCG 1275
C K+F+ L+ H H + + C CG
Sbjct: 110 ECGKSFSQLAH-----------------------------LRAHQRTHTGEKPYKCPECG 140
Query: 1276 KGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
K F ++ L H+R HTG KPY C C K F+++ LN+H++ H
Sbjct: 141 KSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184
Score = 123 bits (312), Expect = 4e-32
Identities = 67/191 (35%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 1050 KGNLQQHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYL 1107
+ GEK C CGK L EH THTGE+PY C CG SF DK L
Sbjct: 6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDL 65
Query: 1108 RIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIG---YTVFCKECNIG 1164
H R H GE+P+ C ECG+SF+ R+ +L+ H R H G Y C EC
Sbjct: 66 TRHQRTHTGEKPYKCPECGKSFSQRA----NLRAH-----QRTHTGEKPYA--CPECGKS 114
Query: 1165 FYSSTHLHSHGIKVH-GLPPFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNF 1223
F HL +H + H G P+ C C K F+ + NL H + + + ++C C K+F+
Sbjct: 115 FSQLAHLRAHQ-RTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSR 173
Query: 1224 KTSYKRHLKQH 1234
+ + H + H
Sbjct: 174 RDALNVHQRTH 184
Score = 123 bits (311), Expect = 6e-32
Identities = 71/194 (36%), Positives = 90/194 (46%), Gaps = 14/194 (7%)
Query: 586 FATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPIC 644
+ G K Y C C +S HL H+ H GE P KCP C
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTH---TGEKP----YKCPEC 55
Query: 645 HKIFIRNYMLRKHLDFVH-GNKYHSCKVCGA--EIKGSLKEHMIVHTGERKYCCHICGK- 700
K F L +H H G K + C CG + +L+ H HTGE+ Y C CGK
Sbjct: 56 GKSFSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKS 114
Query: 701 -KMRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAAR 759
L+ H THTGE+PY C CG +F + L H R H GE+PY C ECG+SF+ R
Sbjct: 115 FSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRR 174
Query: 760 SAFSLHLKKHAGFK 773
A ++H + H G K
Sbjct: 175 DALNVHQRTHTGKK 188
Score = 119 bits (302), Expect = 8e-31
Identities = 66/201 (32%), Positives = 96/201 (47%), Gaps = 19/201 (9%)
Query: 305 FKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCSICQ 364
V + G K + C CG F H+A+H +HTG K + C C
Sbjct: 3 EFGSSSSVAQ-AALEPGEKP-----YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECG 56
Query: 365 STYTTARGLKRHNKNHLREAGVLRADEMYKCDKCDKLFIEQSEMVQHRDWVH-GDKCYLC 423
+++ + L RH + H E + YKC +C K F +++ + H+ H G+K Y C
Sbjct: 57 KSFSDKKDLTRHQRTHTGE-------KPYKCPECGKSFSQRANLRAHQ-RTHTGEKPYAC 108
Query: 424 KICGA--RVKSNLKAHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCEVCG 479
CG ++L+AH R HTGE+P C CGK L H THTGE+P+ C CG
Sbjct: 109 PECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECG 168
Query: 480 STYKYKYYLAVHMRKHTGERP 500
++ + L VH R HTG++
Sbjct: 169 KSFSRRDALNVHQRTHTGKKT 189
Score = 118 bits (298), Expect = 3e-30
Identities = 69/192 (35%), Positives = 91/192 (47%), Gaps = 18/192 (9%)
Query: 963 FSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPSMIHKCPTC 1017
K + C CG ++ HL H+ H +GE P +KCP C
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTH---TGEKP----YKCPEC 55
Query: 1018 YKIFTENHALKKHLDWVH-GNKCHICKVCGA--KIKGNLQQHMETHSGEKKICCHICGK- 1073
K F++ L +H H G K + C CG + NL+ H TH+GEK C CGK
Sbjct: 56 GKSFSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKS 114
Query: 1074 -KLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAAR 1132
L H THTGE+PY C CG SF + L H R H GE+P+ C ECG+SF+ R
Sbjct: 115 FSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRR 174
Query: 1133 SAFSLHLKKHAG 1144
A ++H + H G
Sbjct: 175 DALNVHQRTHTG 186
Score = 105 bits (264), Expect = 1e-25
Identities = 65/175 (37%), Positives = 88/175 (50%), Gaps = 18/175 (10%)
Query: 955 KCPKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPS 1009
CP+C K FS ++ +H R K +KC CG ++ K L RH+ H +GE P
Sbjct: 23 ACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTH---TGEKP-- 77
Query: 1010 MIHKCPTCYKIFTENHALKKHLDWVH-GNKCHICKVCGA--KIKGNLQQHMETHSGEKKI 1066
+KCP C K F++ L+ H H G K + C CG +L+ H TH+GEK
Sbjct: 78 --YKCPECGKSFSQRANLRAHQ-RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPY 134
Query: 1067 CCHICGK--KLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERP 1119
C CGK L+ H THTGE+PY C CG SF + L +H R H G++
Sbjct: 135 KCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 103 bits (260), Expect = 4e-25
Identities = 70/228 (30%), Positives = 91/228 (39%), Gaps = 48/228 (21%)
Query: 677 KGSLKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACEICGGTFKTKWYL 734
S + GE+ Y C CGK L EH THTGE+PY C CG +F K L
Sbjct: 6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDL 65
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFTFETGLMGV 794
H R H GE+PY C ECG+SF+ R+ H + H G
Sbjct: 66 TRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTG----------------------- 102
Query: 795 VTRDEWEILLRDKVRICPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECDKIFATREKLQ 854
+K CP+C K F +R H ++ H K + C EC K F+ + L
Sbjct: 103 -----------EKPYACPECGKSFSQLAHLRAH-QRTHTGEKPYKCPECGKSFSREDNLH 150
Query: 855 RHWNYIHQGIRNTG--PNQLLECHYCGITKNNKTLLRDHISAHLGIKP 900
H H TG P +C CG + + + L H H G K
Sbjct: 151 THQR-TH-----TGEKP---YKCPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 90.2 bits (225), Expect = 2e-20
Identities = 65/224 (29%), Positives = 90/224 (40%), Gaps = 48/224 (21%)
Query: 703 RGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAF 762
GE+PYAC CG +F +L H R H GE+PY C ECG+SF+ +
Sbjct: 6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDL 65
Query: 763 SLHLKKHAGFKQTIECEYCHNTFTFETGLMGVVTRDEWEILLRDKVRICPKCNKEFYSDR 822
+ H + H G +K CP+C K F
Sbjct: 66 TRHQRTHTG----------------------------------EKPYKCPECGKSFSQRA 91
Query: 823 TMRRHLKQVHIEIKTFSCEECDKIFATREKLQRHWNYIHQGIRNTG--PNQLLECHYCGI 880
+R H ++ H K ++C EC K F+ L+ H H TG P +C CG
Sbjct: 92 NLRAH-QRTHTGEKPYACPECGKSFSQLAHLRAHQR-TH-----TGEKP---YKCPECGK 141
Query: 881 TKNNKTLLRDHISAHLGIKPYCCIFCEEKYFSKKS-LKRHEAKH 923
+ + + L H H G KPY C C K FS++ L H+ H
Sbjct: 142 SFSREDNLHTHQRTHTGEKPYKCPEC-GKSFSRRDALNVHQRTH 184
Score = 80.2 bits (199), Expect = 4e-17
Identities = 55/147 (37%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPS 636
+C CG F+ K L H THTG K YKC C +S +L+ H+ H GE P
Sbjct: 51 KCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTH---TGEKP-- 105
Query: 637 KIQKCPICHKIFIRNYMLRKHLDFVH-GNKYHSCKVCGA--EIKGSLKEHMIVHTGERKY 693
CP C K F + LR H H G K + C CG + +L H HTGE+ Y
Sbjct: 106 --YACPECGKSFSQLAHLRAH-QRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPY 162
Query: 694 CCHICGK--KMRGKLKEHMLTHTGERP 718
C CGK R L H THTG++
Sbjct: 163 KCPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 69.8 bits (172), Expect = 2e-13
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 36/201 (17%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHI 215
C CGK F+ + +H++ H G +K ++C C K++ + L H HTGEK +
Sbjct: 24 CPECGKSFSRSDHLAEHQRT-HTG---EKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYK 79
Query: 216 CEICNRDFYSDAMLKRHLVKHSRMIKETSEEFVETGSITREEWYKMVLQRVKTCPLCKKT 275
C C + F A L+ H H T E+ Y CP C K+
Sbjct: 80 CPECGKSFSQRANLRAHQRTH-----------------TGEKPYA--------CPECGKS 114
Query: 276 YQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHC 335
+ +R H R H+ +P++C CGK F + +L H +R H G K ++C C
Sbjct: 115 FSQLAHLRAHQR-THTGEKPYKCPECGKSFSREDNLHTH-QRTHTGEKP-----YKCPEC 167
Query: 336 GAKFISRTHIADHMTSHTGIK 356
G F R + H +HTG K
Sbjct: 168 GKSFSRRDALNVHQRTHTGKK 188
Score = 58.6 bits (143), Expect = 1e-09
Identities = 58/213 (27%), Positives = 85/213 (39%), Gaps = 35/213 (16%)
Query: 22 MRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCD 81
+ S + G KPY C C S+ + L H + H TG E Y+C
Sbjct: 1 ISEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTH---TG----EKPYKCP 53
Query: 82 ICSKMFIEHHAMVKHRDWLHAIHFRSEKNLTSEEWRQLVIKNARKCPICGDRYKSGTDMR 141
C K F + + +H H T E+ KCP CG + ++R
Sbjct: 54 ECGKSFSDKKDLTRH----QRTH-------TGEK--------PYKCPECGKSFSQRANLR 94
Query: 142 RHYRDLHDSTRKCP--CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRV 199
H R H T + P C CGK F+ + ++ H++ H G +K ++C C K++
Sbjct: 95 AHQR-TH--TGEKPYACPECGKSFSQLAHLRAHQR-THTG---EKPYKCPECGKSFSRED 147
Query: 200 GLEDHINNHTGEKGHICEICNRDFYSDAMLKRH 232
L H HTGEK + C C + F L H
Sbjct: 148 NLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH 180
Score = 55.9 bits (136), Expect = 1e-08
Identities = 58/197 (29%), Positives = 79/197 (40%), Gaps = 31/197 (15%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVE 75
C C +S L +H +HTG KPY C C S+ K L RH + H TG E
Sbjct: 23 ACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTH---TG----E 75
Query: 76 DMYQCDICSKMFIEHHAMVKHRDWLHAIHFRSEKNLTSEEWRQLVIKNARKCPICGDRYK 135
Y+C C K F + + H H T E CP CG +
Sbjct: 76 KPYKCPECGKSFSQRANLRAH----QRTH-------TGE--------KPYACPECGKSFS 116
Query: 136 SGTDMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTY 195
+R H R H + C CGK F+ + H++ H G +K ++C C K++
Sbjct: 117 QLAHLRAHQR-THTGEKPYKCPECGKSFSREDNLHTHQR-THTG---EKPYKCPECGKSF 171
Query: 196 LSRVGLEDHINNHTGEK 212
R L H HTG+K
Sbjct: 172 SRRDALNVHQRTHTGKK 188
Score = 51.7 bits (125), Expect = 3e-07
Identities = 52/196 (26%), Positives = 76/196 (38%), Gaps = 31/196 (15%)
Query: 1660 FVNKFNLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRHIYSVHLKRDTK---FPCR 1713
+ L P + C CGKSF+ ++HL H H T + C
Sbjct: 3 EFGSSSSVAQAALEPGEKP----YACPECGKSFSRSDHLAEH-QRTH----TGEKPYKCP 53
Query: 1714 LCSQEFDTKEQRKKHER-----KDHETQGLFSCDLCSYTSTQKYYLVKHKSRHI--KDYN 1766
C + F K+ +H+R K ++ C C + +Q+ L H+ H K Y
Sbjct: 54 ECGKSFSDKKDLTRHQRTHTGEKPYK------CPECGKSFSQRANLRAHQRTHTGEKPYA 107
Query: 1767 VFCKICQLGFLSKNELDVHNIKQHDAQPHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQC 1826
C C F L H +P+ CP C K F + L H++ H +K +C
Sbjct: 108 --CPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG-EKPYKC 164
Query: 1827 DVCGKSFARTFHLKSH 1842
CGKSF+R L H
Sbjct: 165 PECGKSFSRRDALNVH 180
Score = 49.0 bits (118), Expect = 2e-06
Identities = 49/181 (27%), Positives = 73/181 (40%), Gaps = 30/181 (16%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRHIYSVHLKR 1706
P+ CP C K F +L H++ H P ++C CGKSF+ L RH H
Sbjct: 21 PYACPECGKSFSRSDHLAEHQRTHTGEKP----YKCPECGKSFSDKKDLTRH-QRTH--- 72
Query: 1707 DTK---FPCRLCSQEFDTKEQRKKHER-----KDHETQGLFSCDLCSYTSTQKYYLVKHK 1758
T + C C + F + + H+R K + C C + +Q +L H+
Sbjct: 73 -TGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYA------CPECGKSFSQLAHLRAHQ 125
Query: 1759 SRHI--KDYNVFCKICQLGFLSKNELDVHNIKQHDAQPHTCPVCKKIFVNKVTLAAHKKI 1816
H K Y C C F ++ L H +P+ CP C K F + L H++
Sbjct: 126 RTHTGEKPYK--CPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT 183
Query: 1817 H 1817
H
Sbjct: 184 H 184
Score = 49.0 bits (118), Expect = 3e-06
Identities = 58/199 (29%), Positives = 80/199 (40%), Gaps = 48/199 (24%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECDKIFATREKLQRHWNYIHQGIRNTG-- 868
CP+C K F + H ++ H K + C EC K F+ ++ L RH H TG
Sbjct: 24 CPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDLTRHQR-TH-----TGEK 76
Query: 869 PNQLLECHYCGITKNNKTLLRDHISAHLGIKPYCCIFCEEKYFSKKS-LKRHEAKHN--K 925
P +C CG + + + LR H H G KPY C C K FS+ + L+ H+ H K
Sbjct: 77 P---YKCPECGKSFSQRANLRAHQRTHTGEKPYACPEC-GKSFSQLAHLRAHQRTHTGEK 132
Query: 926 VYNKAQYQDYQIQDLSMDQYRELVQSKERKCPKCEKEFSTPRYMRKHLR-----KKFKCD 980
Y KCP+C K FS + H R K +KC
Sbjct: 133 PY---------------------------KCPECGKSFSREDNLHTHQRTHTGEKPYKCP 165
Query: 981 VCGNGYTSVKHLKRHKIKH 999
CG ++ L H+ H
Sbjct: 166 ECGKSFSRRDALNVHQRTH 184
Score = 44.0 bits (105), Expect = 1e-04
Identities = 12/44 (27%), Positives = 16/44 (36%)
Query: 481 TYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+ GE+PY C CG SF+ H + HT
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHT 45
Score = 43.2 bits (103), Expect = 2e-04
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 25/116 (21%)
Query: 1595 FSCDLCSYTSTRKYYLVKHKSRHIKE--YTVFCKKCQLGFLSKNELNVHNIKQHDAQ--- 1649
+ C C + + K L +H+ H E Y C +C F + L H Q
Sbjct: 50 YKCPECGKSFSDKKDLTRHQRTHTGEKPYK--CPECGKSFSQRANLRAH-------QRTH 100
Query: 1650 ----PHTCPVCKKIFVNKFNLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRH 1698
P+ CP C K F +L H++ H P ++C CGKSF+ ++L H
Sbjct: 101 TGEKPYACPECGKSFSQLAHLRAHQRTHTGEKP----YKCPECGKSFSREDNLHTH 152
Score = 39.3 bits (93), Expect = 0.004
Identities = 42/172 (24%), Positives = 66/172 (38%), Gaps = 38/172 (22%)
Query: 1688 SFTGNNHLKRHIYSVHLKRDTK---FPCRLCSQEFDTKEQRKKHER-----KDHETQGLF 1739
S G++ ++ + C C + F + +H+R K ++
Sbjct: 2 SEFGSSSSVAQ-AALE----PGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYK----- 51
Query: 1740 SCDLCSYTSTQKYYLVKHKSRHI--KDYNVFCKICQLGFLSKNELDVHNIKQHDAQ---- 1793
C C + + K L +H+ H K Y C C F + L H Q
Sbjct: 52 -CPECGKSFSDKKDLTRHQRTHTGEKPYK--CPECGKSFSQRANLRAH-------QRTHT 101
Query: 1794 ---PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
P+ CP C K F L AH++ H +K +C CGKSF+R +L +H
Sbjct: 102 GEKPYACPECGKSFSQLAHLRAHQRTHTG-EKPYKCPECGKSFSREDNLHTH 152
Score = 39.3 bits (93), Expect = 0.005
Identities = 44/181 (24%), Positives = 64/181 (35%), Gaps = 48/181 (26%)
Query: 1749 TQKYYLVKHKSRHI--KDYNVFCKICQLGFLSKNELDVHNIKQHDAQ-------PHTCPV 1799
V + K Y C C F + L H Q P+ CP
Sbjct: 4 FGSSSSVAQAALEPGEKPYA--CPECGKSFSRSDHLAEH-------QRTHTGEKPYKCPE 54
Query: 1800 CKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHISSVHLKREQR-----K 1854
C K F +K L H++ H +K +C CGKSF++ +L++H QR K
Sbjct: 55 CGKSFSDKKDLTRHQRTHTG-EKPYKCPECGKSFSQRANLRAH---------QRTHTGEK 104
Query: 1855 KHERKDHETQGLFSCDLCSYTSTQKYYLVKHKSRHI--KDYNVFCKICQLGFLSKNELDV 1912
+ C C + +Q +L H+ H K Y C C F ++ L
Sbjct: 105 PYA-----------CPECGKSFSQLAHLRAHQRTHTGEKPYK--CPECGKSFSREDNLHT 151
Query: 1913 H 1913
H
Sbjct: 152 H 152
Score = 32.0 bits (74), Expect = 1.0
Identities = 51/252 (20%), Positives = 78/252 (30%), Gaps = 97/252 (38%)
Query: 1467 NSRLQLHKRKHTREEEQWTKVNIEYSCDCCEMSWSNPKDFGQHLNLV------------K 1514
+S E+ Y+C C K F + +L K
Sbjct: 6 SSSSVAQAALEPGEK--------PYACPECG------KSFSRSDHLAEHQRTHTGEKPYK 51
Query: 1515 CSYCANAAFCSSKALTRHLVEEHSDKLCGEDEESDELDDEEDTRNVTSDTKFPCRLCSQE 1574
C C +F K LTRH R T + + C C +
Sbjct: 52 CPECGK-SFSDKKDLTRHQ------------------------RTHTGEKPYKCPECGKS 86
Query: 1575 FGTKKQRKKHER-----KDHETRGVFSCDLCSYTSTRKYYLVKHKSRHIKEYTVFCKKCQ 1629
F + + H+R K + C C + ++ +L H+ H E
Sbjct: 87 FSQRANLRAHQRTHTGEKPYA------CPECGKSFSQLAHLRAHQRTHTGE--------- 131
Query: 1630 LGFLSKNELNVHNIKQHDAQPHTCPVCKKIFVNKFNLTTHKKLHL---PMNRNHQCDTCG 1686
+P+ CP C K F + NL TH++ H P ++C CG
Sbjct: 132 -------------------KPYKCPECGKSFSREDNLHTHQRTHTGEKP----YKCPECG 168
Query: 1687 KSFTGNNHLKRH 1698
KSF+ + L H
Sbjct: 169 KSFSRRDALNVH 180
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 124
Score = 104 bits (263), Expect = 2e-26
Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCHICGK--KLRGKLKDHM---LTHTG 469
G C C K LK H R HTGE+P C CGK + L +H +
Sbjct: 4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63
Query: 470 ERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKR-HT 524
E+ F C VC T++ + L +HM HTGE PY C+ C F + H+ + H+
Sbjct: 64 EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119
Score = 95.3 bits (238), Expect = 4e-23
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 1036 GNKCHICKVCGAKI--KGNLQQHMETHSGEKKICCHICGK--KLRGRLNEHM---LTHTG 1088
G+ C C K K L+ H H+GEK C CGK + L EH +
Sbjct: 4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63
Query: 1089 ERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLH 1138
E+ + C C +F+ + LR+H+ H GE P+ CS C Q F + H
Sbjct: 64 EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113
Score = 93.3 bits (233), Expect = 2e-22
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 663 GNKYHSCKVCGAEI--KGSLKEHMIVHTGERKYCCHICGK--KMRGKLKEHM---LTHTG 715
G+ C C + K LK H HTGE+ + C CGK + L EH +
Sbjct: 4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63
Query: 716 ERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLH 765
E+ + C +C TF+ + L +HM H GE PY CS C Q F + H
Sbjct: 64 EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113
Score = 93.3 bits (233), Expect = 2e-22
Identities = 41/128 (32%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 1060 HSGEKKICCHICGKK--LRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRK---H 1114
SG + C C KK + L H HTGE+P+ C CG + K L H + +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 1115 NGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIG---YTVFCKECNIGFYSSTHL 1171
E+ FTCS C ++F R L+ H + H G Y C C+ F L
Sbjct: 62 RSEQVFTCSVCQETFRRRM----ELRLH-----MVSHTGEMPYK--CSSCSQQFMQKKDL 110
Query: 1172 HSHGIKVH 1179
SH IK+H
Sbjct: 111 QSHMIKLH 118
Score = 93.3 bits (233), Expect = 2e-22
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 13/121 (10%)
Query: 1086 HTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGS 1145
+G C C F K YL++H RKH GE+PF C +CG+ + + +L +H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKE----NLLEHEAR 57
Query: 1146 HILRRHIG---YTVFCKECNIGFYSSTHLHSHGIKVH-GLPPFICEHCSKPFTSKGNLTV 1201
+ + + +T C C F L H + H G P+ C CS+ F K +L
Sbjct: 58 NCM--NRSEQVFT--CSVCQETFRRRMELRLH-MVSHTGEMPYKCSSCSQQFMQKKDLQS 112
Query: 1202 H 1202
H
Sbjct: 113 H 113
Score = 88.3 bits (220), Expect = 1e-20
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 687 HTGERKYCCHICGKK--MRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRK---H 741
+G C C KK + LK H HTGE+P+ C CG + K L H + +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 742 NGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFT 786
E+ + CS C ++F R LH+ H G +C C F
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEM-PYKCSSCSQQFM 105
Score = 87.2 bits (217), Expect = 3e-20
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 393 YKCDKCDKLFIEQSEMVQHRDWVH-GDKCYLCKICGA--RVKSNLKAHMR---IHTGERP 446
+C C K F+ + + H H G+K + C CG K NL H ++ E+
Sbjct: 8 VECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV 66
Query: 447 VCCHICGK--KLRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHM-RKHTGER 499
C +C + + R +L+ HM++HTGE P+ C C + K L HM + H+G
Sbjct: 67 FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 86.4 bits (215), Expect = 7e-20
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 441 HTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRK---H 495
+G V C C KK K LK H HTGE+PF C CG Y K L H + +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 496 TGERPYVCNYCGHSFAARPAFNLHLKRHT 524
E+ + C+ C +F R LH+ HT
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHT 90
Score = 84.1 bits (209), Expect = 4e-19
Identities = 40/133 (30%), Positives = 55/133 (41%), Gaps = 26/133 (19%)
Query: 1183 PFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTSYKRHLKQHDDSVTYYP 1242
C C K F SK L VH + + + FEC C K + K +L +H
Sbjct: 7 GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCY----FRKENLLEH-------- 54
Query: 1243 CTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLC 1302
+ ++ + +VFTC VC + F ++ L H HTG PY C C
Sbjct: 55 --------------EARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSC 100
Query: 1303 SKQFTQKSTLNIH 1315
S+QF QK L H
Sbjct: 101 SQQFMQKKDLQSH 113
Score = 78.7 bits (195), Expect = 3e-17
Identities = 39/160 (24%), Positives = 56/160 (35%), Gaps = 46/160 (28%)
Query: 467 HTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHTER 526
+G C C + KYYL VH RKHTGE+P+ C CG + + H E
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH-----EA 56
Query: 527 GDVRHIECQHSLKIIEYKIYQWISIENWFKIKRENVPSTKDQSHKKRDQKIECNICGALF 586
+ + +Q C++C F
Sbjct: 57 RNCMN---------------------------------RSEQVFT-------CSVCQETF 76
Query: 587 ATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMK 625
+ L+ HM +HTG YKC C + K L+ H +K
Sbjct: 77 RRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK 116
Score = 77.2 bits (191), Expect = 1e-16
Identities = 35/151 (23%), Positives = 56/151 (37%), Gaps = 32/151 (21%)
Query: 713 HTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGF 772
+G C C F +K+YL VH RKH GE+P+ C +CG+ + + +L +H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKE----NLLEH--- 54
Query: 773 KQTIECEYCHNTFTFETGLMGVVTRDEWEILLRDKVRICPKCNKEFYSDRTMRRHLKQVH 832
++V C C + F +R H+ H
Sbjct: 55 ---------EARNCMNRS---------------EQVFTCSVCQETFRRRMELRLHMV-SH 89
Query: 833 IEIKTFSCEECDKIFATREKLQRHWNYIHQG 863
+ C C + F ++ LQ H +H G
Sbjct: 90 TGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 68.3 bits (168), Expect = 1e-13
Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 34/144 (23%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPS 636
EC C F +KY L+ H HTG K ++C C Y ++L H+ ++ E
Sbjct: 9 ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV-- 66
Query: 637 KIQKCPICHKIFIRNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCCH 696
C +C + F R + L+ HM+ HTGE Y C
Sbjct: 67 --FTCSVCQETFRR--------------------------RMELRLHMVSHTGEMPYKCS 98
Query: 697 ICGK--KMRGKLKEHML-THTGER 717
C + + L+ HM+ H+G
Sbjct: 99 SCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 66.4 bits (163), Expect = 6e-13
Identities = 37/188 (19%), Positives = 56/188 (29%), Gaps = 73/188 (38%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHM 349
S +C C K F S+ +L H R H G K FEC CG + + ++ +H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVH-NRKHTGEKP-----FECPKCGKCYFRKENLLEHE 55
Query: 350 ---TSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRADEMYKCDKCDKLFIEQS 406
+ + + C C + F
Sbjct: 56 ARNCMNRSEQV-----------------------------------FTCSVCQETF---- 76
Query: 407 EMVQHRDWVHGDKCYLCKICGARVKSNLKAHMRIHTGERPVCCHICGK--KLRGKLKDHM 464
R + L+ HM HTGE P C C + + L+ HM
Sbjct: 77 ----------------------RRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM 114
Query: 465 L-THTGER 471
+ H+G
Sbjct: 115 IKLHSGPS 122
Score = 57.1 bits (139), Expect = 9e-10
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAMLKRHLVKHSRMIKET 243
EC C K +LS+ L+ H HTGEK C C + ++ K +L++H
Sbjct: 6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFR----KENLLEHEA----- 56
Query: 244 SEEFVETGSITREEWYKMVLQRVKTCPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGK 303
+ E+ + C +C++T++ +RLH+ H+ P++C C +
Sbjct: 57 -RNCMNRS----EQVFT--------CSVCQETFRRRMELRLHMV-SHTGEMPYKCSSCSQ 102
Query: 304 YFKSQRHLVQHERRVHLGVK 323
F ++ L H ++H G
Sbjct: 103 QFMQKKDLQSHMIKLHSGPS 122
Score = 54.0 bits (131), Expect = 1e-08
Identities = 33/152 (21%), Positives = 54/152 (35%), Gaps = 34/152 (22%)
Query: 208 HTGEKGHICEICNRDFYSDAMLKRHLVKHSRMIKETSEEFVETGSITREEWYKMVLQRVK 267
+G G C C++ F S LK H KH T E+ ++
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKH-----------------TGEKPFE------- 37
Query: 268 TCPLCKKTYQSAKGMRLHIRE--VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKI 325
CP C K Y + + H ++ + C C + F+ + L H H G
Sbjct: 38 -CPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHM-VSHTGEMP- 94
Query: 326 KHSNFECFHCGAKFISRTHIADHMT-SHTGIK 356
++C C +F+ + + HM H+G
Sbjct: 95 ----YKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 49.0 bits (118), Expect = 7e-07
Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 16/118 (13%)
Query: 1595 FSCDLCSYTSTRKYYLVKHKSRHIKEYTVFCKKCQLGFLSKNELNVHNIKQHDAQPHT-- 1652
C C KYYL H +H E C KC + K L H + +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH---EARNCMNRSE 64
Query: 1653 ----CPVCKKIFVNKFNLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRHIYSVH 1703
C VC++ F + L H H P ++C +C + F L+ H+ +H
Sbjct: 65 QVFTCSVCQETFRRRMELRLHMVSHTGEMP----YKCSSCSQQFMQKKDLQSHMIKLH 118
Score = 46.7 bits (112), Expect = 4e-06
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 1291 HTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKFYEFNTYVTH 1343
+G C C K+F K L +H + H K F C CG ++ + H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH 54
Score = 46.3 bits (111), Expect = 7e-06
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECDKIFATREKLQRH--WNYIHQGIRNTG 868
CP C+K+F S ++ H + H K F C +C K + +E L H N +++
Sbjct: 10 CPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS----- 63
Query: 869 PNQLLECHYCGITKNNKTLLRDHISAHLGIKPYCCIFCEEKYFSKKS-LKRHEAK 922
Q+ C C T + LR H+ +H G PY C C + F +K L+ H K
Sbjct: 64 -EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSC-SQQFMQKKDLQSHMIK 116
Score = 45.6 bits (109), Expect = 1e-05
Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 14/117 (11%)
Query: 1739 FSCDLCSYTSTQKYYLVKHKSRHI--KDYNVFCKICQLGFLSKNELDVHNIKQHDAQPHT 1796
C C KYYL H +H K + C C + K L H + +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFE--CPKCGKCYFRKENLLEH---EARNCMNR 62
Query: 1797 ------CPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHISSVH 1847
C VC++ F ++ L H H + +C C + F + L+SH+ +H
Sbjct: 63 SEQVFTCSVCQETFRRRMELRLHMVSHTG-EMPYKCSSCSQQFMQKKDLQSHMIKLH 118
Score = 44.4 bits (106), Expect = 3e-05
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVE 75
EC C ++ SK L H HTG KP+ C C Y + L H R+ E
Sbjct: 9 ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS----E 64
Query: 76 DMYQCDICSKMFIEHHAMVKH 96
++ C +C + F + H
Sbjct: 65 QVFTCSVCQETFRRRMELRLH 85
Score = 44.0 bits (105), Expect = 4e-05
Identities = 34/205 (16%), Positives = 54/205 (26%), Gaps = 91/205 (44%)
Query: 894 AHLGIKPYCCIFCEEKYFSKKSLKRHEAKHNKVYNKAQYQDYQIQDLSMDQYRELVQSKE 953
G
Sbjct: 1 GSSGSSGV---------------------------------------------------- 8
Query: 954 RKCPKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPP 1008
+CP C K+F + Y++ H R K F+C CG Y ++L H+ ++ E
Sbjct: 9 -ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV- 66
Query: 1009 SMIHKCPTCYKIFTENHALKKHLDWVHGNKCHICKVCGAKIKGNLQQHMETHSGEKKICC 1068
C C + F + L+ HM +H+GE C
Sbjct: 67 ---FTCSVCQETFRR--------------------------RMELRLHMVSHTGEMPYKC 97
Query: 1069 HICGK--KLRGRLNEHML-THTGER 1090
C + + L HM+ H+G
Sbjct: 98 SSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 42.9 bits (102), Expect = 1e-04
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRHIYSVHLKR 1706
CP C K F++K+ L H + H P +C CGK + +L H + R
Sbjct: 7 GVECPTCHKKFLSKYYLKVHNRKHTGEKP----FECPKCGKCYFRKENLLEHEARNCMNR 62
Query: 1707 DTK-FPCRLCSQEFDTKEQRKKHERKDHETQGLFSCDLCSYTSTQKYYLVKHKSR 1760
+ F C +C + F + + + H H + + C CS QK L H +
Sbjct: 63 SEQVFTCSVCQETFRRRMELRLHMVS-HTGEMPYKCSSCSQQFMQKKDLQSHMIK 116
Score = 40.6 bits (96), Expect = 6e-04
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 17/127 (13%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHISSVHLKREQR 1853
CP C K F++K L H + H +K +C CGK + R +L H +
Sbjct: 7 GVECPTCHKKFLSKYYLKVHNRKHTG-EKPFECPKCGKCYFRKENLLEH---------EA 56
Query: 1854 KKHERKDHETQGLFSCDLCSYTSTQKYYLVKHKSRHI--KDYNVFCKICQLGFLSKNELD 1911
+ + ++ +F+C +C T ++ L H H Y C C F+ K +L
Sbjct: 57 RN---CMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYK--CSSCSQQFMQKKDLQ 111
Query: 1912 VHNIKQH 1918
H IK H
Sbjct: 112 SHMIKLH 118
Score = 40.6 bits (96), Expect = 6e-04
Identities = 33/135 (24%), Positives = 50/135 (37%), Gaps = 37/135 (27%)
Query: 874 ECHYCGITKNNKTLLRDHISAHLGIKPYCCIFCEEKYFSKKSLKRHEAKHN-----KVYN 928
EC C +K L+ H H G KP+ C C + YF K++L HEA++ +V+
Sbjct: 9 ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF- 67
Query: 929 KAQYQDYQIQDLSMDQYRELVQSKERKCPKCEKEFSTPRYMRKHLR-----KKFKCDVCG 983
C C++ F +R H+ +KC C
Sbjct: 68 --------------------------TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCS 101
Query: 984 NGYTSVKHLKRHKIK 998
+ K L+ H IK
Sbjct: 102 QQFMQKKDLQSHMIK 116
Score = 35.2 bits (82), Expect = 0.044
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKR 64
C C + + +L H+ SHTG PY C C ++ K L+ H+ +
Sbjct: 68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK 116
Score = 35.2 bits (82), Expect = 0.047
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 16/94 (17%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQGIRNTG--PNQLLECHYCGITKNNKTLLRDH-- 891
C C K F ++ L+ H N H TG P EC CG K L +H
Sbjct: 6 SGVECPTCHKKFLSKYYLKVH-NRKH-----TGEKP---FECPKCGKCYFRKENLLEHEA 56
Query: 892 -ISAHLGIKPYCCIFCEEKYFSKKS-LKRHEAKH 923
+ + + C C ++ F ++ L+ H H
Sbjct: 57 RNCMNRSEQVFTCSVC-QETFRRRMELRLHMVSH 89
Score = 35.2 bits (82), Expect = 0.051
Identities = 32/177 (18%), Positives = 62/177 (35%), Gaps = 57/177 (32%)
Query: 37 HTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSKMFIEHHAMVKH 96
+G C C +++ LK H ++H TG E ++C C K + +++H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKH---TG----EKPFECPKCGKCYFRKENLLEH 54
Query: 97 RDWLHAIHFRSEKNLTSEEWRQLVIKNARKCPICGDRYKSGTDMRRHYRDLHDSTRKCPC 156
+ ++ RSE+ + C
Sbjct: 55 EAR-NCMN-RSEQ------------------V-----FT--------------------C 69
Query: 157 EVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDH-INNHTGEK 212
VC + F ++ H H G + ++C+ CS+ ++ + L+ H I H+G
Sbjct: 70 SVCQETFRRRMELRLHMV-SHTG---EMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 31.7 bits (73), Expect = 0.66
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 16/118 (13%)
Query: 1681 QCDTCGKSFTGNNHLKRHIYSVHLKR----DTKFPCRLCSQEFDTKEQRKKHERKD--HE 1734
+C TC K F +LK H R + F C C + + KE +HE ++ +
Sbjct: 9 ECPTCHKKFLSKYYLKVH------NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62
Query: 1735 TQGLFSCDLCSYTSTQKYYLVKHKSRHI--KDYNVFCKICQLGFLSKNELDVHNIKQH 1790
++ +F+C +C T ++ L H H Y C C F+ K +L H IK H
Sbjct: 63 SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYK--CSSCSQQFMQKKDLQSHMIKLH 118
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 155
Score = 105 bits (264), Expect = 4e-26
Identities = 45/151 (29%), Positives = 64/151 (42%), Gaps = 19/151 (12%)
Query: 393 YKCDKCDKLFIEQSEMVQHRDWVH---GDKCYLCKICGARV-------KSNLKAHMRIHT 442
+ D C + F Q ++V H + H K ++C G + L HMR HT
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 443 GERPVCCHI--CGKK--LRGKLKDHMLTHTGERPFGCE--VCGSTYKYKYYLAVHM-RKH 495
GE+P C C K LK H+ +HTGE+P+ CE C + A H R H
Sbjct: 64 GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123
Query: 496 TGERPYVCNY--CGHSFAARPAFNLHLKRHT 524
+ E+PYVC C + + H+K
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Score = 94.2 bits (235), Expect = 3e-22
Identities = 43/151 (28%), Positives = 60/151 (39%), Gaps = 19/151 (12%)
Query: 640 KCPICHKIFIRNYMLRKHLDFVH---GNKYHSCKVCGAEI-------KGSLKEHMIVHTG 689
+ C + F L H++ H K C G + L HM HTG
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 690 ERKYCCHI--CGKK--MRGKLKEHMLTHTGERPYACE--ICGGTFKTKWYLGVHM-RKHN 742
E+ + C C K LK H+ +HTGE+PY CE C F H R H+
Sbjct: 65 EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124
Query: 743 GERPYMC--SECGQSFAARSAFSLHLKKHAG 771
E+PY+C C + + S+ H+K G
Sbjct: 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 88.8 bits (221), Expect = 2e-20
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 17/123 (13%)
Query: 419 KCYLCKICGA--RVKSNLKAHM---RIHTGERPVCCHICGKKLRGK-------LKDHMLT 466
C + L H+ IH + CH G + L HM
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61
Query: 467 HTGERPFGC--EVCGSTYKYKYYLAVHMRKHTGERPYVCNY--CGHSFAARPAFNLHLKR 522
HTGE+P C E C +Y L H+R HTGE+PY+C + C +F+ H R
Sbjct: 62 HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR 121
Query: 523 -HT 524
H+
Sbjct: 122 THS 124
Score = 88.8 bits (221), Expect = 2e-20
Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 22/155 (14%)
Query: 1183 PFICEHCSKPFTSKGNLTVHVKYYHAKT---LFECNIC-----LKTFNFKTSYKRHLKQH 1234
+ CS+ F S+ L H+ H F C+ L+ F + H+++H
Sbjct: 3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRH 62
Query: 1235 DDSVTY---YPCTV--CSKNLSSPYRLKTHMLIHANNRVFTCE--VCGKGFIQKRYLEEH 1287
T + CT C K+ S LKTH+ H + + CE C K F +H
Sbjct: 63 ----TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKH 118
Query: 1288 K-RVHTGYKPYACDL--CSKQFTQKSTLNIHRKLH 1319
+ R H+ KPY C L C+K++T S+L H K
Sbjct: 119 QNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
Score = 86.9 bits (216), Expect = 1e-19
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 31/157 (19%)
Query: 1068 CHICGKK--LRGRLNEHMLT---HTGERPYACEFCGS-----SFKDKSYLRIHIRKHNGE 1117
C ++ + +L H+ + H + + C + G FK + L +H+R+H GE
Sbjct: 6 WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 65
Query: 1118 RPFTC--SECGQSFAARSAFSLHLKKHAGSHILRRHIG---YTVFCKE--CNIGFYSSTH 1170
+P C C +S++ +LK H LR H G Y C+ C+ F +++
Sbjct: 66 KPHKCTFEGCRKSYSRLE----NLKTH-----LRSHTGEKPYM--CEHEGCSKAFSNASD 114
Query: 1171 LHSHGIKVH-GLPPFICEH--CSKPFTSKGNLTVHVK 1204
H + H P++C+ C+K +T +L HVK
Sbjct: 115 RAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151
Score = 85.0 bits (211), Expect = 5e-19
Identities = 48/218 (22%), Positives = 65/218 (29%), Gaps = 78/218 (35%)
Query: 294 RPHQCKGCGKYFKSQRHLVQHER--RVHLGVKKIKHSNFECFHCGAK-----FISRTHIA 346
+ GC + F SQ LV H +H K F C G F ++ +
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERK-----EFVCHWGGCSRELRPFKAQYMLV 56
Query: 347 DHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRADEMYKCDKCDKLFIEQS 406
HM HTG K H C+ C K +
Sbjct: 57 VHMRRHTGEKPHKCTFEG---------------------------------CRKSYSR-- 81
Query: 407 EMVQHRDWVHGDKCYLCKICGARVKSNLKAHMRIHTGERPVCCH--ICGKK--LRGKLKD 462
NLK H+R HTGE+P C C K
Sbjct: 82 ------------------------LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAK 117
Query: 463 HML-THTGERPFGCEV--CGSTYKYKYYLAVHMRKHTG 497
H TH+ E+P+ C++ C Y L H++ G
Sbjct: 118 HQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 78.4 bits (194), Expect = 9e-17
Identities = 39/159 (24%), Positives = 57/159 (35%), Gaps = 22/159 (13%)
Query: 975 KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPSMIHKCPTC-----YKIFTENHALKK 1029
+ D C + S + L H C + F + L
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKE----FVCHWGGCSRELRPFKAQYMLVV 57
Query: 1030 HLDWVH-GNKCHICKV--CGAKI--KGNLQQHMETHSGEKKICCH--ICGKK--LRGRLN 1080
H+ H G K H C C NL+ H+ +H+GEK C C K
Sbjct: 58 HM-RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRA 116
Query: 1081 EHML-THTGERPYACEF--CGSSFKDKSYLRIHIRKHNG 1116
+H TH+ E+PY C+ C + D S LR H++ +G
Sbjct: 117 KHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 78.4 bits (194), Expect = 1e-16
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 12/120 (10%)
Query: 1241 YPCTVCSKNLSSPYRLKTHML---IHANNRVFTCEVCG-----KGFIQKRYLEEHKRVHT 1292
CS+ S +L H+ IH + F C G + F + L H R HT
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 1293 GYKPYACDL--CSKQFTQKSTLNIHRKLHLNIKDFIC--DLCGAKFYEFNTYVTHVHETH 1348
G KP+ C C K +++ L H + H K ++C + C F + H + TH
Sbjct: 64 GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123
Score = 75.3 bits (186), Expect = 1e-15
Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 21/160 (13%)
Query: 1089 ERPYACEFCGSSFKDKSYLRIHIRK---HNGERPFTCSECGQSFAARSAFSL--HLKKHA 1143
E + C F + L HI H + F C G S R F L H
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELR-PFKAQYMLVVH- 58
Query: 1144 GSHILRRHIG---YTVFCKECNIGFYSSTHLHSHGIKVH-GLPPFICEH--CSKPFTSKG 1197
+RRH G + + C + +L +H ++ H G P++CEH CSK F++
Sbjct: 59 ----MRRHTGEKPHKCTFEGCRKSYSRLENLKTH-LRSHTGEKPYMCEHEGCSKAFSNAS 113
Query: 1198 NLTVHVKYYHAKT-LFECNI--CLKTFNFKTSYKRHLKQH 1234
+ H H+ + C + C K + +S ++H+K
Sbjct: 114 DRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
Score = 70.3 bits (173), Expect = 5e-14
Identities = 39/181 (21%), Positives = 67/181 (37%), Gaps = 46/181 (25%)
Query: 690 ERKYCCHICGKK--MRGKLKEHMLT---HTGERPYACEICGGT-----FKTKWYLGVHMR 739
E C ++ + +L H+ + H + + C G + FK ++ L VHMR
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 740 KHNGERPYMC--SECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFTFETGLMGVVTR 797
+H GE+P+ C C +S++ HL+ H G K CE+
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEK-PYMCEH----------------- 102
Query: 798 DEWEILLRDKVRICPKCNKEFYSDRTMRRHLKQVHIEIKTFSCE--ECDKIFATREKLQR 855
C+K F + +H + H K + C+ C K + L++
Sbjct: 103 --------------EGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRK 148
Query: 856 H 856
H
Sbjct: 149 H 149
Score = 68.0 bits (167), Expect = 3e-13
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 444 ERPVCCHICGKK--LRGKLKDHMLT---HTGERPFGCEVCGSTYKYK-----YYLAVHMR 493
E C ++ + +L H+ + H + F C G + + + Y L VHMR
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 494 KHTGERPYVCNY--CGHSFAARPAFNLHLKRHT 524
+HTGE+P+ C + C S++ HL+ HT
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHT 93
Score = 57.2 bits (139), Expect = 2e-09
Identities = 38/122 (31%), Positives = 49/122 (40%), Gaps = 17/122 (13%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDV--CDNGYSSLKHLKRHKMKHLQENGELP 634
C+ F +Y L HM HTG K +KC C YS L++LK H H GE P
Sbjct: 41 GCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH---TGEKP 97
Query: 635 PSKIQKC--PICHKIFIRNYMLRKHLDFVH-GNKYHSCKV--CGAE--IKGSLKEHMIVH 687
C C K F KH + H K + CK+ C SL++H+
Sbjct: 98 ----YMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
Query: 688 TG 689
G
Sbjct: 154 HG 155
Score = 51.8 bits (125), Expect = 1e-07
Identities = 39/181 (21%), Positives = 67/181 (37%), Gaps = 37/181 (20%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINN---HTGEKGHICEICNRDFYSDAMLKR-HLVKHSRM 239
CS+ + S+ L HIN+ H K +C + LV H R
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR- 60
Query: 240 IKETSEEFVETGSITREEWYKMVLQRVKTCPL--CKKTYQSAKGMRLHIREVHSKVRPHQ 297
TG E+ +K C C+K+Y + ++ H+R H+ +P+
Sbjct: 61 --------RHTG----EKPHK--------CTFEGCRKSYSRLENLKTHLR-SHTGEKPYM 99
Query: 298 CK--GCGKYFKSQRHLVQHERRVHLGVKKIKHSNFEC--FHCGAKFISRTHIADHMTSHT 353
C+ GC K F + +H+ R H K + C C ++ + + H+ +
Sbjct: 100 CEHEGCSKAFSNASDRAKHQNRTHSNEKP-----YVCKLPGCTKRYTDPSSLRKHVKTVH 154
Query: 354 G 354
G
Sbjct: 155 G 155
Score = 48.0 bits (115), Expect = 4e-06
Identities = 28/158 (17%), Positives = 50/158 (31%), Gaps = 43/158 (27%)
Query: 716 ERPYACEICGGTFKTKWYLGVHMRK---HNGERPYMCSECG-----QSFAARSAFSLHLK 767
E + C F ++ L H+ H + ++C G + F A+ +H++
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 768 KHAGFKQTIECEYCHNTFTFETGLMGVVTRDEWEILLRDKVRICPKCNKEFYSDRTMRRH 827
+H G K +C + C K + ++ H
Sbjct: 61 RHTGEK-PHKCTF-------------------------------EGCRKSYSRLENLKTH 88
Query: 828 LKQVHIEIKTFSCEE--CDKIFATREKLQRHWNYIHQG 863
+ H K + CE C K F+ +H N H
Sbjct: 89 -LRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125
Score = 45.7 bits (109), Expect = 2e-05
Identities = 44/245 (17%), Positives = 72/245 (29%), Gaps = 102/245 (41%)
Query: 211 EKGHICEICNRDFYSDAMLKRHLVKHSRMIKETSEEFVETGSITREEWYKMVLQRVKTCP 270
E + C+++F S L H+
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSE---------------------------------- 26
Query: 271 LCKKTYQSAKGMRLHIREVHSKVRPHQCKGCG-----KYFKSQRHLVQHERRVHLGVKKI 325
+H + C G + FK+Q LV H R H G K
Sbjct: 27 ------------HIHGER-----KEFVCHWGGCSRELRPFKAQYMLVVH-MRRHTGEKP- 67
Query: 326 KHSNFECFH--CGAKFISRTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLRE 383
+C C + ++ H+ SHTG K ++C
Sbjct: 68 ----HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEH--------------------- 102
Query: 384 AGVLRADEMYKCDKCDKLFIEQSEMVQHRDWVH-GDKCYLCKI--CGAR--VKSNLKAHM 438
+ C K F S+ +H++ H +K Y+CK+ C R S+L+ H+
Sbjct: 103 ------------EGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV 150
Query: 439 RIHTG 443
+ G
Sbjct: 151 KTVHG 155
Score = 43.7 bits (104), Expect = 1e-04
Identities = 40/183 (21%), Positives = 59/183 (32%), Gaps = 50/183 (27%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHYCGITKNNKT-----LLRD 890
+ C + F ++E+L H N H + CH+ G ++ + +L
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIH---GE-RKEFVCHWGGCSRELRPFKAQYMLVV 57
Query: 891 HISAHLGIKPYCCIFCE-EKYFSKKS-LKRHEAKHN--KVYNKAQYQDYQIQDLSMDQYR 946
H+ H G KP+ C F K +S+ LK H H K Y
Sbjct: 58 HMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPY------------------- 98
Query: 947 ELVQSKERKC--PKCEKEFSTPRYMRKHLR------KKFKCDV--CGNGYTSVKHLKRHK 996
C C K FS KH K + C + C YT L++H
Sbjct: 99 --------MCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV 150
Query: 997 IKH 999
Sbjct: 151 KTV 153
Score = 40.7 bits (96), Expect = 0.001
Identities = 40/210 (19%), Positives = 62/210 (29%), Gaps = 74/210 (35%)
Query: 16 ECHHCAMRYSSKSQLLDHLNS---HTGLKPYICHICKNSYVAAKGLKR--HLKRHMQA-T 69
C+ + S+ QL+ H+NS H K ++CH + K L HM+ T
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG-GCSRELRPFKAQYMLVVHMRRHT 63
Query: 70 GQLSVEDMYQCDI--CSKMFIEHHAMVKHRDWLHAIHFRSEKNLTSEEWRQLVIKNARKC 127
G E ++C C K + + H
Sbjct: 64 G----EKPHKCTFEGCRKSYSRLENLKTH------------------------------- 88
Query: 128 PICGDRYKSGTDMRRH-----YRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQ 182
+R H Y C E C K F++ +H+ H
Sbjct: 89 ------------LRSHTGEKPY--------MCEHEGCSKAFSNASDRAKHQNRTHSN--- 125
Query: 183 KKKFECAH--CSKTYLSRVGLEDHINNHTG 210
+K + C C+K Y L H+ G
Sbjct: 126 EKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 40.7 bits (96), Expect = 0.001
Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 23/167 (13%)
Query: 78 YQCDICSKMFIEHHAMVKHRDWLHAIHFRSEKNLTSEEWRQLVIKNARKCPICGDRYKSG 137
+ D CS+ F +V H + H IH K C +K+
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEH-IHGE-RKEFVCHW---------GGCSRELRPFKAQ 52
Query: 138 TDMRRHYRDLHDSTR--KCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAH--CSK 193
+ H R H + KC E C K ++ ++ +K H + H G +K + C H CSK
Sbjct: 53 YMLVVHMR-RHTGEKPHKCTFEGCRKSYSRLENLKTHLR-SHTG---EKPYMCEHEGCSK 107
Query: 194 TYLSRVGLEDHINN-HTGEKGHICEI--CNRDFYSDAMLKRHLVKHS 237
+ + H N H+ EK ++C++ C + + + L++H+
Sbjct: 108 AFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Score = 38.0 bits (89), Expect = 0.009
Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 27/154 (17%)
Query: 1566 FPCRLCSQEFGTKKQRKKHERKDHETRG--VFSCDLCSYTSTRK-----YYLVKHKSRHI 1618
CSQEF +++Q H +H F C + + Y LV H RH
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 1619 KE--YTVFCKKCQLGFLSKNELNVHNIKQHDAQ-PHTC--PVCKKIFVNKFNLTTHKKLH 1673
E + + C+ + L H ++ H + P+ C C K F N + H
Sbjct: 64 GEKPHKCTFEGCRKSYSRLENLKTH-LRSHTGEKPYMCEHEGCSKAFSNASDRAKH---- 118
Query: 1674 LPMNRNH------QCDT--CGKSFTGNNHLKRHI 1699
NR H C C K +T + L++H+
Sbjct: 119 --QNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV 150
Score = 37.2 bits (87), Expect = 0.016
Identities = 34/173 (19%), Positives = 48/173 (27%), Gaps = 60/173 (34%)
Query: 1681 QCDTCGKSFTGNNHLKRHIYSVHLKRDTK-FPCRLCSQEFDTKEQRKKHERKDHETQGLF 1739
+ D C + F L HI S H+ + K F C
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG------------------------ 40
Query: 1740 SCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELDVHNIKQHDAQPHTCPV 1799
C +Y LV H RH E +PH C
Sbjct: 41 GCSRELRPFKAQYMLVVHMRRH-----------------TGE-----------KPHKCTF 72
Query: 1800 --CKKIFVNKVTLAAHKKIH---LPIDKNCQCDVCGKSFARTFHLKSHISSVH 1847
C+K + L H + H P C+ + C K+F+ H + H
Sbjct: 73 EGCRKSYSRLENLKTHLRSHTGEKPY--MCEHEGCSKAFSNASDRAKHQNRTH 123
Score = 36.8 bits (86), Expect = 0.019
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 22/122 (18%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVHIEI--KTFSCEECD-----KIFATREKLQRHWNYIHQG 863
C++EF S + H+ HI K F C + F + L H H
Sbjct: 6 WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH-MRRH-- 62
Query: 864 IRNTG--PNQLLECHY--CGITKNNKTLLRDHISAHLGIKPYCCIFCE-EKYFSKKS-LK 917
TG P+ +C + C + + L+ H+ +H G KPY C K FS S
Sbjct: 63 ---TGEKPH---KCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRA 116
Query: 918 RH 919
+H
Sbjct: 117 KH 118
Score = 36.0 bits (84), Expect = 0.035
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Query: 1295 KPYACDLCSKQFTQKSTLNIH---RKLHLNIKDFICDLCG 1331
D CS++F + L H +H K+F+C G
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG 41
Score = 33.7 bits (78), Expect = 0.22
Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 17/73 (23%)
Query: 1822 KNCQCDVCGKSFARTFHLKSHISSVHLKREQRKKHERKDHETQGLFSCDLCSYTS----- 1876
+C+ D C + F L HI+S H+ H + F C +
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHI------------HGERKEFVCHWGGCSRELRPF 49
Query: 1877 TQKYYLVKHKSRH 1889
+Y LV H RH
Sbjct: 50 KAQYMLVVHMRRH 62
>1tf6_A Protein (transcription factor IIIA); complex (transcription
regulation/DNA), RNA polymerase III, transcription
initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 PDB: 1tf3_A
Length = 190
Score = 102 bits (257), Expect = 7e-25
Identities = 55/251 (21%), Positives = 80/251 (31%), Gaps = 78/251 (31%)
Query: 1082 HMLTHTGERPYACEF--CGSSFKDKSYLRIHIRKHNGERPFTCSE--CGQSFAARSAFSL 1137
+ Y C F CG+++ L+ H+ KH GE+PF C E C + F +
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLH---- 58
Query: 1138 HLKKHAGSHILRRHIGYTVFCKECNIGFYSSTHLHSHGIKVHGLPPFICEH--CSKPFTS 1195
HL +H+ +H G F C+ C FT+
Sbjct: 59 HLTRHSLTHT--------------------------------GEKNFTCDSDGCDLRFTT 86
Query: 1196 KGNLTVHVKYYHA--KTLFECNI--CLKTFNFKTSYKRHLKQHDDSVTYYPCTVCSKNLS 1251
K N+ H +H ++ C+ C K F
Sbjct: 87 KANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ------------------------- 121
Query: 1252 SPYRLKTHMLIHANNRVFTC--EVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQK 1309
LK H H + C E C K F L+ H++VH GY D CS
Sbjct: 122 ----LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTW 177
Query: 1310 STLNIH-RKLH 1319
+ H + H
Sbjct: 178 TLYLKHVAECH 188
Score = 97.7 bits (244), Expect = 4e-23
Identities = 55/207 (26%), Positives = 75/207 (36%), Gaps = 51/207 (24%)
Query: 578 ECNI--CGALFATKYTLQDHMNTHTGNK-YKCD--VCDNGYSSLKHLKRHKMKHLQENGE 632
C+ CGA + + LQ H+ HTG K + C C+ G++SL HL RH + H GE
Sbjct: 14 ICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTH---TGE 70
Query: 633 LPPSKIQKC--PICHKIFIRNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGE 690
C C F K ++K+H
Sbjct: 71 KN----FTCDSDGCDLRFTT--------------------------KANMKKHFNRFHNI 100
Query: 691 RK--YCCHI--CGK--KMRGKLKEHMLTHTGERPYAC--EICGGTFKTKWYLGVHMRKHN 742
+ Y CH CGK K +LK H +HT + PY C E C F L H + H
Sbjct: 101 KICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA 160
Query: 743 GERPYMCSECGQSFAARSAFSLHLKKH 769
G C ++L+LK
Sbjct: 161 GYPCKKDDSCSFVG---KTWTLYLKHV 184
Score = 97.3 bits (243), Expect = 6e-23
Identities = 52/240 (21%), Positives = 76/240 (31%), Gaps = 66/240 (27%)
Query: 436 AHMRIHTGERPVCCHI--CGK--KLRGKLKDHMLTHTGERPFGCE--VCGSTYKYKYYLA 489
+ + C CG KL+ H+ HTGE+PF C+ C + ++L
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 490 VHMRKHTGERPYVCN--YCGHSFAARPAFNLHLKRHTERGDVRHIECQHSLKIIEYKIYQ 547
H HTGE+ + C+ C F + H R KI Y
Sbjct: 62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNI------------KICVY---- 105
Query: 548 WISIENWFKIKRENVPSTKDQSHKKRDQKIECNI--CGALFATKYTLQDHMNTHTGNK-Y 604
C+ CG F L+ H +HT Y
Sbjct: 106 ------------------------------VCHFENCGKAFKKHNQLKVHQFSHTQQLPY 135
Query: 605 KC--DVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFIRNYMLRKHLDFVH 662
+C + CD +S LKRH+ H G +K C + + KH+ H
Sbjct: 136 ECPHEGCDKRFSLPSRLKRHEKVH---AGYPC----KKDDSCSFVGKTWTLYLKHVAECH 188
Score = 93.8 bits (234), Expect = 1e-21
Identities = 56/198 (28%), Positives = 73/198 (36%), Gaps = 33/198 (16%)
Query: 971 KHLR-----KKFKCDV--CGNGYTSVKHLKRHKIKHMKESGELPPSMIHKC--PTCYKIF 1021
K++ C CG Y L+ H KH +GE P C C K F
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKH---TGEKP----FPCKEEGCEKGF 54
Query: 1022 TENHALKKHLDWVH-GNKCHICK--VCGAK--IKGNLQQHMETHSGEKKIC--CHI--CG 1072
T H L +H H G K C C + K N+++H K CH CG
Sbjct: 55 TSLHHLTRHSL-THTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCG 113
Query: 1073 K--KLRGRLNEHMLTHTGERPYAC--EFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQS 1128
K K +L H +HT + PY C E C F S L+ H + H G C
Sbjct: 114 KAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFV 173
Query: 1129 FAARSAFSLHLKKHAGSH 1146
++L+LK A H
Sbjct: 174 G---KTWTLYLKHVAECH 188
Score = 91.9 bits (229), Expect = 4e-21
Identities = 50/209 (23%), Positives = 67/209 (32%), Gaps = 50/209 (23%)
Query: 595 HMNTHTGNK-YKCDV--CDNGYSSLKHLKRHKMKHLQENGELPPSKIQKC--PICHKIFI 649
K Y C C Y+ L+ H KH GE P C C K F
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKH---TGEKP----FPCKEEGCEKGFT 55
Query: 650 RNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCC--HICGKK--MRGK 705
+ L H + HTGE+ + C C + +
Sbjct: 56 SLH--------------------------HLTRHSLTHTGEKNFTCDSDGCDLRFTTKAN 89
Query: 706 LKEHMLTHTGER--PYACEI--CGGTFKTKWYLGVHMRKHNGERPYMCSE--CGQSFAAR 759
+K+H + Y C CG FK L VH H + PY C C + F+
Sbjct: 90 MKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLP 149
Query: 760 SAFSLHLKKHAGFKQ--TIECEYCHNTFT 786
S H K HAG+ C + T+T
Sbjct: 150 SRLKRHEKVHAGYPCKKDDSCSFVGKTWT 178
Score = 91.5 bits (228), Expect = 5e-21
Identities = 45/196 (22%), Positives = 69/196 (35%), Gaps = 26/196 (13%)
Query: 348 HMTSHTGIKNHVCSI--CQSTYTTARGLKRHNKNHLREAGVLRADEMYKCD--KCDKLFI 403
K ++CS C + Y L+ H H E + + C C+K F
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGE-------KPFPCKEEGCEKGFT 55
Query: 404 EQSEMVQHRDWVH-GDKCYLCK--ICGA--RVKSNLKAHMRIHTGER--PVCCHI--CGK 454
+ +H H G+K + C C K+N+K H + CH CGK
Sbjct: 56 SLHHLTRHSL-THTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGK 114
Query: 455 --KLRGKLKDHMLTHTGERPFGC--EVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSF 510
K +LK H +HT + P+ C E C + L H + H G + C
Sbjct: 115 AFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVG 174
Query: 511 AARPAFNLHLKR-HTE 525
+ H+ H +
Sbjct: 175 KTWTLYLKHVAECHQD 190
Score = 86.5 bits (215), Expect = 4e-19
Identities = 42/201 (20%), Positives = 68/201 (33%), Gaps = 35/201 (17%)
Query: 683 HMIVHTGERKYCCHI--CGK--KMRGKLKEHMLTHTGERPYACE--ICGGTFKTKWYLGV 736
+ ++Y C CG KL+ H+ HTGE+P+ C+ C F + +L
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 737 HMRKHNGERPYMCSE--CGQSFAARSAFSLHLKKHAGFKQTI-ECEY--CHNTFTFETGL 791
H H GE+ + C C F ++ H + K + C + C F
Sbjct: 63 HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFK----- 117
Query: 792 MGVVTRDEWEILLRDKVRI--------C--PKCNKEFYSDRTMRRHLKQVHIEIKTFSCE 841
L+ C C+K F ++RH ++VH +
Sbjct: 118 --------KHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH-EKVHAGYPCKKDD 168
Query: 842 ECDKIFATREKLQRHWNYIHQ 862
C + T +H HQ
Sbjct: 169 SCSFVGKTWTLYLKHVAECHQ 189
Score = 86.1 bits (214), Expect = 4e-19
Identities = 55/251 (21%), Positives = 78/251 (31%), Gaps = 77/251 (30%)
Query: 1110 HIRKHNGERPFTCS--ECGQSFAARSAFSLHLKKHAGSHILRRHIGYTVFCKECNIGFYS 1167
+ + CS +CG ++ HL KH G
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEK--------------------- 41
Query: 1168 STHLHSHGIKVHGLPPFICEH--CSKPFTSKGNLTVHVKYYHAKTLFECN--ICLKTFNF 1223
PF C+ C K FTS +LT H + + F C+ C F
Sbjct: 42 ---------------PFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTT 86
Query: 1224 KTSYKRHLKQHDDSVTYYPCTVCSKNLSSPYRLKTHMLIHANNRVF----TCEVCGKGFI 1279
K + +K H N ++ E CGK F
Sbjct: 87 KAN-----------------------------MKKHFNRFHNIKICVYVCHFENCGKAFK 117
Query: 1280 QKRYLEEHKRVHTGYKPYAC--DLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKFYEF 1337
+ L+ H+ HT PY C + C K+F+ S L H K+H D C +
Sbjct: 118 KHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTW 177
Query: 1338 NTYVTHVHETH 1348
Y+ HV E H
Sbjct: 178 TLYLKHVAECH 188
Score = 72.6 bits (179), Expect = 2e-14
Identities = 46/228 (20%), Positives = 67/228 (29%), Gaps = 53/228 (23%)
Query: 709 HMLTHTGERPYACEI--CGGTFKTKWYLGVHMRKHNGERPYMCSE--CGQSFAARSAFSL 764
+ Y C CG + W L H+ KH GE+P+ C E C + F + +
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 765 HLKKHAGFKQTIECEYCHNTFTFETGLMGVVTRDEWEILLRDKVRICPKCNKEFYSDRTM 824
H H G K C+ C+ F + M
Sbjct: 63 HSLTHTGEK-NFTCDSD-------------------------------GCDLRFTTKANM 90
Query: 825 RRHLKQVHIEIKTF----SCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECH--YC 878
++H IK E C K F +L+ H + H EC C
Sbjct: 91 KKH-FNRFHNIKICVYVCHFENCGKAFKKHNQLKVH-QFSHTQ------QLPYECPHEGC 142
Query: 879 GITKNNKTLLRDHISAHLGIKPYCCIFCEE--KYFSKKSLKRHEAKHN 924
+ + L+ H H G C K ++ LK H
Sbjct: 143 DKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWT-LYLKHVAECHQ 189
Score = 57.6 bits (140), Expect = 3e-09
Identities = 34/161 (21%), Positives = 49/161 (30%), Gaps = 54/161 (33%)
Query: 1241 YPCTV--CSKNLSSPYRLKTHMLIHANNRVFTCE--VCGKGFIQKRYLEEHKRVHTGYKP 1296
Y C+ C + ++L+ H+ H + F C+ C KGF +L H HTG K
Sbjct: 13 YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN 72
Query: 1297 YACD--LCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKFYEFNTYVTHVHETHAILPRV 1354
+ CD C +FT K+ + H NIK +
Sbjct: 73 FTCDSDGCDLRFTTKANMKKHFNRFHNIKICV---------------------------- 104
Query: 1355 IVTKFKVEDFQFFVCESMQSAKSTCVLCKKVFSTRENCTNH 1395
+VC C K F H
Sbjct: 105 ------------YVCHFEN--------CGKAFKKHNQLKVH 125
Score = 51.8 bits (125), Expect = 3e-07
Identities = 47/207 (22%), Positives = 68/207 (32%), Gaps = 44/207 (21%)
Query: 184 KKFEC--AHCSKTYLSRVGLEDHINNHTGEKGHICE--ICNRDFYSDAMLKRHLVKHSRM 239
K++ C A C Y L+ H+ HTGEK C+ C + F S L RH + H
Sbjct: 11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTH--- 67
Query: 240 IKETSEEFVETGSITREEWYKMVLQRVKTC--PLCKKTYQSAKGMRLHIREVHS--KVRP 295
T E+ + C C + + M+ H K+
Sbjct: 68 --------------TGEKNFT--------CDSDGCDLRFTTKANMKKHFN-RFHNIKICV 104
Query: 296 HQC--KGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFH--CGAKFISRTHIADHMTS 351
+ C + CGK FK L H+ H +EC H C +F + + H
Sbjct: 105 YVCHFENCGKAFKKHNQLKVHQF-SHTQQLP-----YECPHEGCDKRFSLPSRLKRHEKV 158
Query: 352 HTGIKNHVCSICQSTYTTARGLKRHNK 378
H G C T +H
Sbjct: 159 HAGYPCKKDDSCSFVGKTWTLYLKHVA 185
Score = 46.0 bits (110), Expect = 3e-05
Identities = 51/188 (27%), Positives = 69/188 (36%), Gaps = 34/188 (18%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICH--ICKNSYVAAKGLKRHLKRHMQATGQLS 73
C Y+ +L HL HTG KP+ C C+ + + L RH H TG
Sbjct: 16 SFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTH---TG--- 69
Query: 74 VEDMYQCD--ICSKMFIEHHAMVKHRDWLHAIHFRSEKNLTSEEWRQLVIKNARKCPI-- 129
E + CD C F M KH + + C
Sbjct: 70 -EKNFTCDSDGCDLRFTTKANMKKH----FNRF-------HNIKICVY------VCHFEN 111
Query: 130 CGDRYKSGTDMRRHYRDLHDSTR--KCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFE 187
CG +K ++ H H +CP E C KRF+ R+K+H K VH G KK
Sbjct: 112 CGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGYPCKKDDS 169
Query: 188 CAHCSKTY 195
C+ KT+
Sbjct: 170 CSFVGKTW 177
Score = 44.9 bits (107), Expect = 7e-05
Identities = 48/210 (22%), Positives = 73/210 (34%), Gaps = 39/210 (18%)
Query: 33 HLNSHTGLKPYICHI--CKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCD--ICSKMFI 88
K YIC C +Y L+ HL +H TG E + C C K F
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKH---TG----EKPFPCKEEGCEKGFT 55
Query: 89 EHHAMVKHRDWLHAIHFRSEKNLTSEEWRQLVIKNARKCPICGDRYKSGTDMRRHYRDLH 148
H + +H H EKN T + C R+ + +M++H+
Sbjct: 56 SLHHLTRH----SLTH-TGEKNFTCDS------------DGCDLRFTTKANMKKHFN-RF 97
Query: 149 ----DSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAH--CSKTYLSRVGLE 202
C E CGK F ++K H+ H + +EC H C K + L+
Sbjct: 98 HNIKICVYVCHFENCGKAFKKHNQLKVHQF-SHTQ---QLPYECPHEGCDKRFSLPSRLK 153
Query: 203 DHINNHTGEKGHICEICNRDFYSDAMLKRH 232
H H G + C+ + + +H
Sbjct: 154 RHEKVHAGYPCKKDDSCSFVGKTWTLYLKH 183
Score = 41.4 bits (98), Expect = 0.001
Identities = 44/249 (17%), Positives = 67/249 (26%), Gaps = 95/249 (38%)
Query: 878 CGITKNNKTLLRDHISAHLGIKPYCC--IFCEEKYFSKKS-LKRHEAKHN--KVYNKAQY 932
CG N L+ H+ H G KP+ C CE K F+ L RH H K +
Sbjct: 20 CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCE-KGFTSLHHLTRHSLTHTGEKNF----- 73
Query: 933 QDYQIQDLSMDQYRELVQSKERKC--PKCEKEFSTPRYMRKHLRKKFKCDVCGNGYTSVK 990
C C+ F+T
Sbjct: 74 ----------------------TCDSDGCDLRFTTKA----------------------- 88
Query: 991 HLKRHKIKHMKESGELPPSMIHKCPT--CYKIFTENHALKKHLDWVHGNKCHICKVCGAK 1048
++K+H + ++ C C K F ++
Sbjct: 89 NMKKHFNRF---HNI--KICVYVCHFENCGKAFKKH------------------------ 119
Query: 1049 IKGNLQQHMETHSGEKKICCH--ICGK--KLRGRLNEHMLTHTGERPYACEFCGSSFKDK 1104
L+ H +H+ + C C K L RL H H G + C K
Sbjct: 120 --NQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTW 177
Query: 1105 SYLRIHIRK 1113
+ H+ +
Sbjct: 178 TLYLKHVAE 186
Score = 41.0 bits (97), Expect = 0.001
Identities = 35/175 (20%), Positives = 57/175 (32%), Gaps = 38/175 (21%)
Query: 153 KCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFEC--AHCSKTYLSRVGLEDHINNHTG 210
C E C K F S+ + +H H G +K F C C + ++ ++ H N
Sbjct: 44 PCKEEGCEKGFTSLHHLTRHSLT-HTG---EKNFTCDSDGCDLRFTTKANMKKHFNRFHN 99
Query: 211 EKGH----ICEICNRDFYSDAMLKRHLVKHSRMIKETSEEFVETGSITREEWYKMVLQRV 266
K E C + F LK H H T++ Y+
Sbjct: 100 IKICVYVCHFENCGKAFKKHNQLKVHQFSH-----------------TQQLPYE------ 136
Query: 267 KTC--PLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVH 319
C C K + ++ H + VH+ + C K+ ++H H
Sbjct: 137 --CPHEGCDKRFSLPSRLKRHEK-VHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188
Score = 33.7 bits (78), Expect = 0.32
Identities = 41/221 (18%), Positives = 68/221 (30%), Gaps = 50/221 (22%)
Query: 829 KQVHIEIKTFSCE--ECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHY--CGITKNN 884
K + + K + C +C + KLQ H H G + P C C +
Sbjct: 4 KALPVVYKRYICSFADCGAAYNKNWKLQAHLC-KHTGEK---P---FPCKEEGCEKGFTS 56
Query: 885 KTLLRDHISAHLGIKPYCC--IFCEEKYFSKKS-LKRHEAKHNKVYNKAQYQDYQIQDLS 941
L H H G K + C C + F+ K+ +K+H + +
Sbjct: 57 LHHLTRHSLTHTGEKNFTCDSDGC-DLRFTTKANMKKHFNRFH----------------- 98
Query: 942 MDQYRELVQSKERKCPKCEKEFSTPRYMRKHLR-----KKFKC--DVCGNGYTSVKHLKR 994
+ C K F ++ H ++C + C ++ LKR
Sbjct: 99 ----NIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKR 154
Query: 995 HKIKHMKESGELPPSMIHKCPTCYKIFTENHALKKHLDWVH 1035
H+ H + C K +T KH+ H
Sbjct: 155 HEKVHAGYPCKKD----DSCSFVGKTWTL---YLKHVAECH 188
Score = 31.8 bits (73), Expect = 1.2
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 15/105 (14%)
Query: 1605 TRKYYLVKHKSRHIKEYTVFCK--KCQLGFLSKNELNVHNIKQHD--AQPHTCPV--CKK 1658
T ++L +H H E C C L F +K + H + H+ + C C K
Sbjct: 55 TSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGK 114
Query: 1659 IFVNKFNLTTHKKLH---LPMNRNHQC--DTCGKSFTGNNHLKRH 1698
F L H+ H LP ++C + C K F+ + LKRH
Sbjct: 115 AFKKHNQLKVHQFSHTQQLP----YECPHEGCDKRFSLPSRLKRH 155
Score = 30.6 bits (70), Expect = 3.1
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 11/103 (10%)
Query: 1749 TQKYYLVKHKSRHI--KDYNVFCKICQLGFLSKNELDVHNIKQHD--AQPHTCPV--CKK 1802
T ++L +H H K++ C L F +K + H + H+ + C C K
Sbjct: 55 TSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGK 114
Query: 1803 IFVNKVTLAAHKKIH---LPIDKNCQCDVCGKSFARTFHLKSH 1842
F L H+ H LP + C + C K F+ LK H
Sbjct: 115 AFKKHNQLKVHQFSHTQQLPYE--CPHEGCDKRFSLPSRLKRH 155
Score = 29.9 bits (68), Expect = 6.7
Identities = 13/46 (28%), Positives = 16/46 (34%), Gaps = 5/46 (10%)
Query: 1800 CKKIFVNKVTLAAHKKIHL---PIDKNCQCDVCGKSFARTFHLKSH 1842
C + L AH H P C+ + C K F HL H
Sbjct: 20 CGAAYNKNWKLQAHLCKHTGEKPFP--CKEEGCEKGFTSLHHLTRH 63
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Length = 119
Score = 98.0 bits (245), Expect = 4e-24
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 417 GDKCYLCK--ICGAR--VKSNLKAHMRIHTGERPVCCHI--CGKK--LRGKLKDHMLTHT 468
+ ++C C R S+L+ H R HTGE+P C C ++ +LK H HT
Sbjct: 3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHT 62
Query: 469 GERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNY--CGHSFAARPAFNLHLKRH 523
G +PF C+ C + +L H R HTGE+P+ C + C FA H H
Sbjct: 63 GVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 93.4 bits (233), Expect = 2e-22
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 677 KGSLKEHMIVHTGERKYCCHI--CGKK--MRGKLKEHMLTHTGERPYACEICGGTFKTKW 732
L+ H HTGE+ Y C C ++ +LK H HTG +P+ C+ C F
Sbjct: 21 LSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD 80
Query: 733 YLGVHMRKHNGERPYMCS--ECGQSFAARSAFSLHLKKH 769
+L H R H GE+P+ C C + FA H H
Sbjct: 81 HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 92.6 bits (231), Expect = 3e-22
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 1050 KGNLQQHMETHSGEKKICCHI--CGKK--LRGRLNEHMLTHTGERPYACEFCGSSFKDKS 1105
+LQ H H+GEK C C ++ +L H HTG +P+ C+ C F
Sbjct: 21 LSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD 80
Query: 1106 YLRIHIRKHNGERPFTCS--ECGQSFAARSAFSLHLKKH 1142
+L+ H R H GE+PF+C C + FA H H
Sbjct: 81 HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 86.4 bits (215), Expect = 6e-20
Identities = 38/123 (30%), Positives = 50/123 (40%), Gaps = 18/123 (14%)
Query: 1061 SGEKKICC--HICGKK--LRGRLNEHMLTHTGERPYACEF--CGSSFKDKSYLRIHIRKH 1114
S ++ C C K+ L H HTGE+PY C+F C F L+ H R+H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 1115 NGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIG---YTVFCKECNIGFYSSTHL 1171
G +PF C C + F+ HLK H R H G ++ C F S L
Sbjct: 62 TGVKPFQCKTCQRKFSRSD----HLKTH-----TRTHTGEKPFSCRWPSCQKKFARSDEL 112
Query: 1172 HSH 1174
H
Sbjct: 113 VRH 115
Score = 82.6 bits (205), Expect = 1e-18
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 688 TGERKYCC--HICGKK--MRGKLKEHMLTHTGERPYACEI--CGGTFKTKWYLGVHMRKH 741
+ +R + C C K+ L+ H HTGE+PY C+ C F L H R+H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 742 NGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +P+ C C + F+ H + H G K
Sbjct: 62 TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEK 93
Score = 79.9 bits (198), Expect = 1e-17
Identities = 38/114 (33%), Positives = 48/114 (42%), Gaps = 12/114 (10%)
Query: 393 YKCD--KCDKLFIEQSEMVQHRDWVH-GDKCYLCKI--CGAR--VKSNLKAHMRIHTGER 445
+ C C+K + + S + H H G+K Y C C R LK H R HTG +
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK 65
Query: 446 PVCCHICGKK--LRGKLKDHMLTHTGERPFGCEV--CGSTYKYKYYLAVHMRKH 495
P C C +K LK H THTGE+PF C C + L H H
Sbjct: 66 PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 77.6 bits (192), Expect = 6e-17
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 1241 YPCT--VCSKNLSSPYRLKTHMLIHANNRVFTCEV--CGKGFIQKRYLEEHKRVHTGYKP 1296
+ C C+K L+ H H + + C+ C + F + L+ H+R HTG KP
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 1297 YACDLCSKQFTQKSTLNIHRKLHLNIKDFICDL--CGAKFYEFNTYVTHVHETH 1348
+ C C ++F++ L H + H K F C C KF + V H H H
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH-HNMH 119
Score = 77.2 bits (191), Expect = 8e-17
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 442 TGERPVCC--HICGKK--LRGKLKDHMLTHTGERPFGCEV--CGSTYKYKYYLAVHMRKH 495
+ +RP C C K+ L+ H HTGE+P+ C+ C + L H R+H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 496 TGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TG +P+ C C F+ H + HT
Sbjct: 62 TGVKPFQCKTCQRKFSRSDHLKTHTRTHT 90
Score = 72.6 bits (179), Expect = 4e-15
Identities = 40/151 (26%), Positives = 54/151 (35%), Gaps = 42/151 (27%)
Query: 600 TGNK-YKCD--VCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPI--CHKIFIRNYML 654
+ + + C C+ Y L HL+ H KH GE P +C C + F R+
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKH---TGEKP----YQCDFKDCERRFSRS--- 51
Query: 655 RKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCCHICGKK--MRGKLKEHMLT 712
LK H HTG + + C C +K LK H T
Sbjct: 52 -----------------------DQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRT 88
Query: 713 HTGERPYACEI--CGGTFKTKWYLGVHMRKH 741
HTGE+P++C C F L H H
Sbjct: 89 HTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 71.4 bits (176), Expect = 1e-14
Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 42/154 (27%)
Query: 1087 TGERPYACE--FCGSSFKDKSYLRIHIRKHNGERPFTCS--ECGQSFAARSAFSLHLKKH 1142
+ +RP+ C C + S+L++H RKH GE+P+ C +C + F+ LK+H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSD----QLKRH 57
Query: 1143 AGSHILRRHIGYTVFCKECNIGFYSSTHLHSHGIKVHGLPPFICEHCSKPFTSKGNLTVH 1202
RRH G +K PF C+ C + F+ +L H
Sbjct: 58 -----QRRHTG----------------------VK-----PFQCKTCQRKFSRSDHLKTH 85
Query: 1203 VKYYHAKTLFECNI--CLKTFNFKTSYKRHLKQH 1234
+ + + F C C K F RH H
Sbjct: 86 TRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 59.5 bits (145), Expect = 1e-10
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 714 TGERPYACE--ICGGTFKTKWYLGVHMRKHNGERPYMCS--ECGQSFAARSAFSLHLKKH 769
+ +RP+ C C + +L +H RKH GE+PY C +C + F+ H ++H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 770 AGFKQTIECEYCHNTFT 786
G K +C+ C F+
Sbjct: 62 TGVK-PFQCKTCQRKFS 77
Score = 57.5 bits (140), Expect = 8e-10
Identities = 40/182 (21%), Positives = 52/182 (28%), Gaps = 75/182 (41%)
Query: 294 RPHQCK--GCGKYFKSQRHLVQHERRVHLGVKKIKHSNFEC--FHCGAKFISRTHIADHM 349
RP C GC K + HL H R H G K ++C C +F + H
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEK-----PYQCDFKDCERRFSRSDQLKRHQ 58
Query: 350 TSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRADEMYKCDKCDKLFIEQSEMV 409
HTG+K ++C C + F
Sbjct: 59 RRHTGVKP-----------------------------------FQCKTCQRKFSR----- 78
Query: 410 QHRDWVHGDKCYLCKICGARVKSNLKAHMRIHTGERPVCCHI--CGKK--LRGKLKDHML 465
+LK H R HTGE+P C C KK +L H
Sbjct: 79 ---------------------SDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN 117
Query: 466 TH 467
H
Sbjct: 118 MH 119
Score = 47.9 bits (115), Expect = 2e-06
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Query: 578 ECNI--CGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELP 634
+C+ C F+ L+ H HTG K ++C C +S HLK H H GE P
Sbjct: 38 QCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTH---TGEKP 94
Query: 635 PSKIQKC--PICHKIFIRNYMLRKH 657
C P C K F R+ L +H
Sbjct: 95 ----FSCRWPSCQKKFARSDELVRH 115
Score = 44.0 bits (105), Expect = 3e-05
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 153 KCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEK 212
+C + C +RF+ ++K+H++ H G K F+C C + + L+ H HTGEK
Sbjct: 38 QCDFKDCERRFSRSDQLKRHQRR-HTG---VKPFQCKTCQRKFSRSDHLKTHTRTHTGEK 93
Query: 213 GHICEI--CNRDFYSDAMLKRH 232
C C + F L RH
Sbjct: 94 PFSCRWPSCQKKFARSDELVRH 115
Score = 43.7 bits (104), Expect = 5e-05
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 22/120 (18%)
Query: 955 KC--PKCEKEFSTPRYMRKHLR-----KKFKCDV--CGNGYTSVKHLKRHKIKHMKESGE 1005
C P C K + +++ H R K ++CD C ++ LKRH+ +H +G
Sbjct: 8 MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH---TGV 64
Query: 1006 LPPSMIHKCPTCYKIFTENHALKKHLDWVH-GNKCHICKV--CGAK--IKGNLQQHMETH 1060
P +C TC + F+ + LK H H G K C+ C K L +H H
Sbjct: 65 KP----FQCKTCQRKFSRSDHLKTHT-RTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 42.1 bits (100), Expect = 2e-04
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 153 KCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFEC--AHCSKTYLSRVGLEDHINNHTG 210
C C KR+ + ++ H + H G +K ++C C + + L+ H HTG
Sbjct: 8 MCAYPGCNKRYFKLSHLQMHSRK-HTG---EKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63
Query: 211 EKGHICEICNRDFYSDAMLKRH 232
K C+ C R F LK H
Sbjct: 64 VKPFQCKTCQRKFSRSDHLKTH 85
Score = 41.4 bits (98), Expect = 3e-04
Identities = 43/175 (24%), Positives = 52/175 (29%), Gaps = 66/175 (37%)
Query: 184 KKFECAH--CSKTYLSRVGLEDHINNHTGEKGHICEI--CNRDFYSDAMLKRHLVKHSRM 239
+ F CA+ C+K Y L+ H HTGEK + C+ C R F LKRH
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRH------- 57
Query: 240 IKETSEEFVETGSITREEWYKMVLQRVKTCPLCKKTYQSAKGMRLHIREVHSKVRPHQCK 299
R H +P QCK
Sbjct: 58 ------------------------------------------QRRHTGV-----KPFQCK 70
Query: 300 GCGKYFKSQRHLVQHERRVHLGVKKIKHSNFEC--FHCGAKFISRTHIADHMTSH 352
C + F HL H R H G K F C C KF + H H
Sbjct: 71 TCQRKFSRSDHLKTH-TRTHTGEKP-----FSCRWPSCQKKFARSDELVRHHNMH 119
Score = 41.4 bits (98), Expect = 3e-04
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDV--CDNGYSSLKHLKRHKMKH 626
+C C F+ L+ H THTG K + C C ++ L RH H
Sbjct: 68 QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 40.2 bits (95), Expect = 7e-04
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 16 ECHH--CAMRYSSKSQLLDHLNSHTGLKPYICHI--CKNSYVAAKGLKRHLKRHMQATGQ 71
C + C RY S L H HTG KPY C C+ + + LKRH +RH TG
Sbjct: 8 MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH---TG- 63
Query: 72 LSVEDMYQCDICSKMFIEHHAMVKHR 97
+QC C + F + H
Sbjct: 64 ---VKPFQCKTCQRKFSRSDHLKTHT 86
Score = 38.3 bits (90), Expect = 0.003
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVE 75
+ C R+S QL H HTG+KP+ C C+ + + LK H + H TG E
Sbjct: 40 DFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTH---TG----E 92
Query: 76 DMYQCDI--CSKMFIEHHAMVKH 96
+ C C K F +V+H
Sbjct: 93 KPFSCRWPSCQKKFARSDELVRH 115
Score = 37.9 bits (89), Expect = 0.005
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 1292 TGYKPYACD--LCSKQFTQKSTLNIHRKLHLNIKDFICDL--CGAKF 1334
+ +P+ C C+K++ + S L +H + H K + CD C +F
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRF 48
Score = 36.7 bits (86), Expect = 0.013
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHL---PIDKNCQCDVCGKSFARTFHLKSH 1842
P C C++ F L H + H P +C+ C K FAR+ L H
Sbjct: 66 PFQCKTCQRKFSRSDHLKTHTRTHTGEKPF--SCRWPSCQKKFARSDELVRH 115
Score = 35.6 bits (83), Expect = 0.035
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 812 PKCNKEFYSDRTMRRHLKQVHIEIKTFSCE--ECDKIFATREKLQRHWNYIHQGIRNTGP 869
P CNK ++ ++ H + H K + C+ +C++ F+ ++L+RH H G++ P
Sbjct: 12 PGCNKRYFKLSHLQMH-SRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-RHTGVK---P 66
Query: 870 NQLLECHYCGITKNNKTLLRDHISAHLGIKPYCCIFCE-EKYFSKKS-LKRHEAKH 923
+C C + L+ H H G KP+ C + +K F++ L RH H
Sbjct: 67 ---FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 34.8 bits (81), Expect = 0.057
Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 35/116 (30%)
Query: 743 GERPYMCSE--CGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFTFETGLMGVVTRDEW 800
+RP+MC+ C + + S +H +KH G K +C++
Sbjct: 3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKP-YQCDFKD------------------ 43
Query: 801 EILLRDKVRICPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECDKIFATREKLQRH 856
C + F ++RH ++ H +K F C+ C + F+ + L+ H
Sbjct: 44 -------------CERRFSRSDQLKRH-QRRHTGVKPFQCKTCQRKFSRSDHLKTH 85
Score = 34.4 bits (80), Expect = 0.074
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 9/55 (16%)
Query: 1650 PHTCPV--CKKIFVNKFNLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRHI 1699
P+ C C++ F L H++ H P QC TC + F+ ++HLK H
Sbjct: 36 PYQCDFKDCERRFSRSDQLKRHQRRHTGVKP----FQCKTCQRKFSRSDHLKTHT 86
Score = 34.0 bits (79), Expect = 0.11
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHI--CKNSYVAAKGLKRHLKRH 65
+C C ++S L H +HTG KP+ C C+ + + L RH H
Sbjct: 68 QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 33.6 bits (78), Expect = 0.15
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 1794 PHTCPV--CKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHI 1843
P+ C C++ F L H++ H K QC C + F+R+ HLK+H
Sbjct: 36 PYQCDFKDCERRFSRSDQLKRHQRRHTG-VKPFQCKTCQRKFSRSDHLKTHT 86
Score = 31.3 bits (72), Expect = 0.96
Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 7/54 (12%)
Query: 1794 PHTC--PVCKKIFVNKVTLAAHKKIHL---PIDKNCQCDVCGKSFARTFHLKSH 1842
P C P C K + L H + H P C C + F+R+ LK H
Sbjct: 6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPY--QCDFKDCERRFSRSDQLKRH 57
Score = 30.2 bits (69), Expect = 2.5
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 11/56 (19%)
Query: 1650 PHTC--PVCKKIFVNKFNLTTHKKLHL---PMNRNHQCDT--CGKSFTGNNHLKRH 1698
P C P C K + +L H + H P +QCD C + F+ ++ LKRH
Sbjct: 6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKP----YQCDFKDCERRFSRSDQLKRH 57
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation,
initiator element, zinc finger protein, DNA- protein
recognition; HET: DNA; 2.50A {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Length = 124
Score = 98.0 bits (245), Expect = 5e-24
Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 11/119 (9%)
Query: 393 YKCDK--CDKLFIEQSEMVQHRDWVHGDKCYLCKICGA--RVKSNLKAHMRIHTGERPVC 448
C C K+F + S M +H HG + ++C CG S LK H +HTGE+P
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHL-HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64
Query: 449 CHI--CGK--KLRGKLKDHMLTHTGERPFGCEV--CGSTYKYKYYLAVHMRKHTGERPY 501
C CGK L L+ H+ HTG+RP+ C C + L H+ H +
Sbjct: 65 CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 91.0 bits (227), Expect = 1e-21
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 1050 KGNLQQHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACEF--CGSSFKDKS 1105
+++H+ TH G + C CGK +L H L HTGE+P+ C F CG F
Sbjct: 20 NSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF 78
Query: 1106 YLRIHIRKHNGERPFTCS--ECGQSFAARSAFSLHLKKHAG 1144
LR H+R H G+RP+ C C + FA + H+ HA
Sbjct: 79 NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119
Score = 90.3 bits (225), Expect = 3e-21
Identities = 43/116 (37%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 419 KCYLC--KICGA--RVKSNLKAHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERP 472
+ C K C R S ++ H+ H G R C CGK KLK H L HTGE+P
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62
Query: 473 FGCEV--CGSTYKYKYYLAVHMRKHTGERPYVCNY--CGHSFAARPAFNLHLKRHT 524
F C CG + + L H+R HTG+RPYVC + C FA H+ H
Sbjct: 63 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 118
Score = 89.9 bits (224), Expect = 4e-21
Identities = 43/119 (36%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 1012 HKCPT--CYKIFTENHALKKHLDWVHGNKCHICKVCGA--KIKGNLQQHMETHSGEKKIC 1067
CP C K+F +N A++KHL HG + H+C CG L++H H+GEK
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHL-HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64
Query: 1068 CHI--CGK--KLRGRLNEHMLTHTGERPYACEF--CGSSFKDKSYLRIHIRKHNGERPF 1120
C CGK L L H+ HTG+RPY C F C F + L+ HI H +
Sbjct: 65 CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 89.1 bits (222), Expect = 8e-21
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 677 KGSLKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACEI--CGGTFKTKW 732
++++H+ H G R + C CGK KLK H L HTGE+P+ C CG F +
Sbjct: 20 NSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF 78
Query: 733 YLGVHMRKHNGERPYMCS--ECGQSFAARSAFSLHLKKHAGFK 773
L H+R H G+RPY+C C + FA + H+ HA K
Sbjct: 79 NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121
Score = 86.4 bits (215), Expect = 6e-20
Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 640 KCPI--CHKIFIRNYMLRKHLDFVHGNKYHSCKVCGAE--IKGSLKEHMIVHTGERKYCC 695
CP C K+F N +RKHL HG + H C CG LK H +VHTGE+ + C
Sbjct: 7 ACPHKGCTKMFRDNSAMRKHLH-THGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 696 HI--CGK--KMRGKLKEHMLTHTGERPYACEI--CGGTFKTKWYLGVHMRKHNGERPY 747
CGK + L+ H+ HTG+RPY C C F L H+ H +
Sbjct: 66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 80.3 bits (199), Expect = 8e-18
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 1071 CGKKLR--GRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS--ECG 1126
C K R + +H+ TH G R + C CG +F + S L+ H H GE+PF C+ CG
Sbjct: 13 CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 71
Query: 1127 QSFAARSAFSLHLKKHAGSHILRRHIG---YTVFCKECNIGFYSSTHLHSH 1174
+ F+ +L+ H +R H G Y CN F ST+L SH
Sbjct: 72 KRFSLDF----NLRTH-----VRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 113
Score = 77.2 bits (191), Expect = 1e-16
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 1241 YPCTV--CSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYA 1298
C C+K ++ H+ H RV C CGK F++ L+ H+ VHTG KP+
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64
Query: 1299 CDL--CSKQFTQKSTLNIHRKLHLNIKDFICDL--CGAKF 1334
C C K+F+ L H ++H + ++C C KF
Sbjct: 65 CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF 104
Score = 69.5 bits (171), Expect = 6e-14
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 690 ERKYCCHI--CGK--KMRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGER 745
R C C K + +++H+ TH G R + C CG F L H H GE+
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 746 PYMCS--ECGQSFAARSAFSLHLKKHAGFK 773
P+ C+ CG+ F+ H++ H G +
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 91
Score = 67.5 bits (166), Expect = 3e-13
Identities = 36/124 (29%), Positives = 48/124 (38%), Gaps = 14/124 (11%)
Query: 1183 PFICEH--CSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTSYKRHLKQHDDSVTY 1240
C H C+K F + H+ H + C C K F + KRH H T
Sbjct: 5 TIACPHKGCTKMFRDNSAMRKHLHT-HGPRVHVCAECGKAFVESSKLKRHQLVH----TG 59
Query: 1241 ---YPCTV--CSKNLSSPYRLKTHMLIHANNRVFTCEV--CGKGFIQKRYLEEHKRVHTG 1293
+ CT C K S + L+TH+ IH +R + C C K F Q L+ H H
Sbjct: 60 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119
Query: 1294 YKPY 1297
K
Sbjct: 120 AKNN 123
Score = 66.8 bits (164), Expect = 4e-13
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 444 ERPVCCHI--CGKKLR--GKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGER 499
R + C C K R ++ H+ TH G R C CG + L H HTGE+
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 500 PYVCNY--CGHSFAARPAFNLHLKRHT 524
P+ C + CG F+ H++ HT
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIHT 88
Score = 63.3 bits (155), Expect = 8e-12
Identities = 36/148 (24%), Positives = 54/148 (36%), Gaps = 39/148 (26%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNKYKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSK 637
C +F ++ H++TH + C C + LKRH++ H GE P
Sbjct: 9 PHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVH---TGEKP--- 62
Query: 638 IQKCPI--CHKIFIRNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCC 695
+C C K F + +L+ H+ +HTG+R Y C
Sbjct: 63 -FQCTFEGCGKRFSLD--------------------------FNLRTHVRIHTGDRPYVC 95
Query: 696 HI--CGKKMR--GKLKEHMLTHTGERPY 719
C KK LK H+LTH +
Sbjct: 96 PFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 62.1 bits (152), Expect = 2e-11
Identities = 39/150 (26%), Positives = 54/150 (36%), Gaps = 45/150 (30%)
Query: 955 KCPK--CEKEFSTPRYMRKHLR----KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPP 1008
CP C K F MRKHL + C CG + LKRH++ H +GE P
Sbjct: 7 ACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVH---TGEKP- 62
Query: 1009 SMIHKCPT--CYKIFTENHALKKHLDWVHGNKCHICKVCGAKIKGNLQQHMETHSGEKKI 1066
+C C K F+ + NL+ H+ H+G++
Sbjct: 63 ---FQCTFEGCGKRFSLD--------------------------FNLRTHVRIHTGDRPY 93
Query: 1067 CCHI--CGKKLR--GRLNEHMLTHTGERPY 1092
C C KK L H+LTH +
Sbjct: 94 VCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 59.5 bits (145), Expect = 2e-10
Identities = 35/160 (21%), Positives = 51/160 (31%), Gaps = 48/160 (30%)
Query: 294 RPHQC--KGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTS 351
R C KGC K F+ + +H H G + C CG F+ + + H
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLH-TH-GPRV-----HVCAECGKAFVESSKLKRHQLV 56
Query: 352 HTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRADEMYKCDKCDKLFIEQSEMVQH 411
HTG K C+ C K F + H
Sbjct: 57 HTGEKPFQCTFEG---------------------------------CGKRFSLDFNLRTH 83
Query: 412 RDWVH-GDKCYLCKI--CGA--RVKSNLKAHMRIHTGERP 446
+H GD+ Y+C C +NLK+H+ H +
Sbjct: 84 VR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122
Score = 43.3 bits (103), Expect = 7e-05
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 268 TCPLCKKTYQSAKGMRLHIREVHSKVRPHQC--KGCGKYFKSQRHLVQHERRVHLGVKKI 325
C C K + + ++ H VH+ +P QC +GCGK F +L H R +H G +
Sbjct: 36 VCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGDRP- 92
Query: 326 KHSNFECFH--CGAKFISRTHIADHMTSHTGIKNH 358
+ C C KF T++ H+ +H KN+
Sbjct: 93 ----YVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 41.3 bits (98), Expect = 4e-04
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 153 KCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEK 212
CP + C K F +++H + + CA C K ++ L+ H HTGEK
Sbjct: 7 ACPHKGCTKMFRDNSAMRKH-----LHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 213 GHICEI--CNRDFYSDAMLKRH 232
C C + F D L+ H
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTH 83
Score = 37.9 bits (89), Expect = 0.006
Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 17/119 (14%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECDKIFATREKLQRHWNYIHQGIRNTG-- 868
C K F + MR+HL H + C EC K F KL+RH +H TG
Sbjct: 10 HKGCTKMFRDNSAMRKHLH-THGP-RVHVCAECGKAFVESSKLKRH-QLVH-----TGEK 61
Query: 869 PNQLLECHY--CGITKNNKTLLRDHISAHLGIKPYCCIFCE-EKYFSKKS-LKRHEAKH 923
P +C + CG + LR H+ H G +PY C F K F++ + LK H H
Sbjct: 62 P---FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117
Score = 37.9 bits (89), Expect = 0.006
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 1650 PHTCPV--CKKIFVNKFNLTTHKKLHLPMNRNHQCDTCGKSFTGNNHLKRH 1698
CP C K+F + + H H P R H C CGK+F ++ LKRH
Sbjct: 5 TIACPHKGCTKMFRDNSAMRKHLHTHGP--RVHVCAECGKAFVESSKLKRH 53
Score = 35.2 bits (82), Expect = 0.053
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHI--CKNSYVAAKGLKRHLKRHMQATGQLS 73
C C + S+L H HTG KP+ C C + L+ H++ H TG
Sbjct: 36 VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH---TG--- 89
Query: 74 VEDMYQCDI--CSKMFIEHHAMVKH 96
+ Y C C+K F + + H
Sbjct: 90 -DRPYVCPFDGCNKKFAQSTNLKSH 113
Score = 32.9 bits (76), Expect = 0.28
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 1794 PHTCPV--CKKIFVNKVTLAAHKKIHLPIDK--NCQCDVCGKSFARTFHLKSHI 1843
P C C K F L H +IH D+ C D C K FA++ +LKSHI
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIHTG-DRPYVCPFDGCNKKFAQSTNLKSHI 114
Score = 30.2 bits (69), Expect = 2.3
Identities = 40/164 (24%), Positives = 51/164 (31%), Gaps = 49/164 (29%)
Query: 744 ERPYMCS--ECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFTFETGLMGVVTRDEWE 801
R C C + F SA HL H
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTHG------------------------------- 31
Query: 802 ILLRDKVRICPKCNKEFYSDRTMRRHLKQVHIEIKTFSC--EECDKIFATREKLQRHWNY 859
+V +C +C K F ++RH + VH K F C E C K F+ L+ H
Sbjct: 32 ----PRVHVCAECGKAFVESSKLKRH-QLVHTGEKPFQCTFEGCGKRFSLDFNLRTH-VR 85
Query: 860 IHQGIRNTGPNQLLECHY--CGITKNNKTLLRDHISAHLGIKPY 901
IH G R P C + C T L+ HI H K
Sbjct: 86 IHTGDR---P---YVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
cerebellum 3, disease mutation, DNA-binding,
metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Length = 155
Score = 98.9 bits (247), Expect = 7e-24
Identities = 39/129 (30%), Positives = 50/129 (38%), Gaps = 17/129 (13%)
Query: 393 YKCDKCDKLFIEQSEMVQHRDWVHGDKCY---------LCKICGA--RVKSNLKAHMRIH 441
CD+ F E+V H H C G + K L H+R+H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 442 TGERPVCCHI--CGK--KLRGKLKDHMLTHTGERPFGCEV--CGSTYKYKYYLAVHMRKH 495
TGE+P C CGK LK H THTGE+PF CE C + HM H
Sbjct: 86 TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145
Query: 496 TGERPYVCN 504
T ++ +
Sbjct: 146 TSDKSGPSS 154
Score = 94.7 bits (236), Expect = 2e-22
Identities = 37/146 (25%), Positives = 53/146 (36%), Gaps = 19/146 (13%)
Query: 397 KCDKLFIEQSEMVQHRDWVH-GDKCYLCKICGA--RVKSNLKAHMRIHTGERP------- 446
+ + + W+ K C L H+ + P
Sbjct: 2 SSGSSGQPIKQELSCK-WIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60
Query: 447 --VCCHICGK--KLRGKLKDHMLTHTGERPFGCEV--CGSTYKYKYYLAVHMRKHTGERP 500
C GK K + KL +H+ HTGE+PF C CG + L +H R HTGE+P
Sbjct: 61 YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP 120
Query: 501 YVCNY--CGHSFAARPAFNLHLKRHT 524
+ C + C FA H+ HT
Sbjct: 121 FKCEFEGCDRRFANSSDRKKHMHVHT 146
Score = 92.7 bits (231), Expect = 9e-22
Identities = 39/178 (21%), Positives = 52/178 (29%), Gaps = 35/178 (19%)
Query: 582 CGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQE--NGELPPSKI 638
G+ CD +S++ L H
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 639 QKCPICHKIFIRNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCCHI- 697
++CP K F Y L H + VHTGE+ + C
Sbjct: 63 EECPREGKSFKAKYKLVNH--------------------------IRVHTGEKPFPCPFP 96
Query: 698 -CGK--KMRGKLKEHMLTHTGERPYACEI--CGGTFKTKWYLGVHMRKHNGERPYMCS 750
CGK LK H THTGE+P+ CE C F HM H ++ S
Sbjct: 97 GCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 90.8 bits (226), Expect = 5e-21
Identities = 41/159 (25%), Positives = 57/159 (35%), Gaps = 24/159 (15%)
Query: 982 CGNGYTSVKHLKRHKIKHMKESGELPPSMIHKCPTCYKIFTENHALKKHLDWVHGNK--- 1038
G+ +K K +L +C + F+ H L H+ H
Sbjct: 3 SGSSGQPIKQELSCKWID---EAQLS----RPKKSCDRTFSTMHELVTHVTMEHVGGPEQ 55
Query: 1039 ------CHICKVCGA--KIKGNLQQHMETHSGEKKICCHI--CGK--KLRGRLNEHMLTH 1086
C G K K L H+ H+GEK C CGK L H TH
Sbjct: 56 NNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115
Query: 1087 TGERPYACEF--CGSSFKDKSYLRIHIRKHNGERPFTCS 1123
TGE+P+ CEF C F + S + H+ H ++ S
Sbjct: 116 TGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 89.3 bits (222), Expect = 1e-20
Identities = 40/144 (27%), Positives = 53/144 (36%), Gaps = 24/144 (16%)
Query: 1019 KIFTENHALKKHLD--WVH-GNKCHICKVCGA--KIKGNLQQHMETHSGEK--------- 1064
+ +K+ L W+ K C L H+
Sbjct: 2 SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61
Query: 1065 KICCHICGK--KLRGRLNEHMLTHTGERPYACEF--CGSSFKDKSYLRIHIRKHNGERPF 1120
C GK K + +L H+ HTGE+P+ C F CG F L+IH R H GE+PF
Sbjct: 62 WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPF 121
Query: 1121 TCS--ECGQSFAARSAFSLHLKKH 1142
C C + FA S KKH
Sbjct: 122 KCEFEGCDRRFANSS----DRKKH 141
Score = 87.3 bits (217), Expect = 8e-20
Identities = 36/173 (20%), Positives = 55/173 (31%), Gaps = 24/173 (13%)
Query: 1160 ECNIGFYSSTHLHSHGIKVHGLPPFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLK 1219
S + C + F++ L HV H + N
Sbjct: 2 SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61
Query: 1220 TFNFKTSYKRHLKQHDDSVTYYPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEV--CGKG 1277
C K+ + Y+L H+ +H + F C CGK
Sbjct: 62 WEE--------------------CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI 101
Query: 1278 FIQKRYLEEHKRVHTGYKPYACDL--CSKQFTQKSTLNIHRKLHLNIKDFICD 1328
F + L+ HKR HTG KP+ C+ C ++F S H +H + K
Sbjct: 102 FARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 78.1 bits (193), Expect = 1e-16
Identities = 29/136 (21%), Positives = 43/136 (31%), Gaps = 25/136 (18%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFT---------CSECGQSFAAR 1132
+ + C +F L H+ + P C G+SF A+
Sbjct: 16 CKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAK 75
Query: 1133 SAFSLHLKKHAGSHILRRHIG---YTVFCKECNIGFYSSTHLHSHGIKVH-GLPPFICEH 1188
L H +R H G + C F S +L H + H G PF CE
Sbjct: 76 Y----KLVNH-----IRVHTGEKPFPCPFPGCGKIFARSENLKIH-KRTHTGEKPFKCEF 125
Query: 1189 --CSKPFTSKGNLTVH 1202
C + F + + H
Sbjct: 126 EGCDRRFANSSDRKKH 141
Score = 78.1 bits (193), Expect = 1e-16
Identities = 38/212 (17%), Positives = 54/212 (25%), Gaps = 69/212 (32%)
Query: 272 CKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK----KIKH 327
+ Q K + K C + F + LV H +
Sbjct: 3 SGSSGQPIKQELSCKW-IDEAQLSRPKKSCDRTFSTMHELVTHV-TMEHVGGPEQNNHVC 60
Query: 328 SNFECFHCGAKFISRTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVL 387
EC G F ++ + +H+ HTG K C
Sbjct: 61 YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPG----------------------- 97
Query: 388 RADEMYKCDKCDKLFIEQSEMVQHRDWVHGDKCYLCKICGARVKSNLKAHMRIHTGERPV 447
C K+F NLK H R HTGE+P
Sbjct: 98 ----------CGKIFAR--------------------------SENLKIHKRTHTGEKPF 121
Query: 448 CCHI--CGKKLR--GKLKDHMLTHTGERPFGC 475
C C ++ K HM HT ++
Sbjct: 122 KCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 76.2 bits (188), Expect = 5e-16
Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 16/111 (14%)
Query: 679 SLKEHMI---VHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYA---------CEIC 724
+K+ + + + C + +L H+ P C
Sbjct: 9 PIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPRE 68
Query: 725 GGTFKTKWYLGVHMRKHNGERPYMCS--ECGQSFAARSAFSLHLKKHAGFK 773
G +FK K+ L H+R H GE+P+ C CG+ FA +H + H G K
Sbjct: 69 GKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEK 119
Score = 71.9 bits (177), Expect = 1e-14
Identities = 40/249 (16%), Positives = 59/249 (23%), Gaps = 103/249 (41%)
Query: 478 CGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHTERGDVRHIECQHS 537
GS+ + + C +F+ H+ H+
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTME-------HVG---- 51
Query: 538 LKIIEYKIYQWISIENWFKIKRENVPSTKDQSHKKRDQKIECNICGALFATKYTLQDHMN 597
Q + W EC G F KY L +H+
Sbjct: 52 ------GPEQNNHVCYWE----------------------ECPREGKSFKAKYKLVNHIR 83
Query: 598 THTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFIRNYMLRK 656
HTG K + C C KIF R
Sbjct: 84 VHTGEKPFPCPFPG---------------------------------CGKIFAR------ 104
Query: 657 HLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCCHI--CGKK--MRGKLKEHMLT 712
+LK H HTGE+ + C C ++ K+HM
Sbjct: 105 --------------------SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV 144
Query: 713 HTGERPYAC 721
HT ++
Sbjct: 145 HTSDKSGPS 153
Score = 65.8 bits (161), Expect = 2e-12
Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 7/144 (4%)
Query: 1097 CGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG-SHILRRHIGYT 1155
GSS + + C ++F+ H+ H+ Y
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 1156 VFCKECNIGFYSSTHLHSHGIKVH-GLPPFICEH--CSKPFTSKGNLTVHVKYYHAKTLF 1212
C F + L +H I+VH G PF C C K F NL +H + + + F
Sbjct: 63 EECPREGKSFKAKYKLVNH-IRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPF 121
Query: 1213 ECNI--CLKTFNFKTSYKRHLKQH 1234
+C C + F + K+H+ H
Sbjct: 122 KCEFEGCDRRFANSSDRKKHMHVH 145
Score = 61.9 bits (151), Expect = 5e-11
Identities = 19/100 (19%), Positives = 27/100 (27%), Gaps = 11/100 (11%)
Query: 1246 CSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYA------- 1298
+ + + I + C + F L H + P
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 1299 --CDLCSKQFTQKSTLNIHRKLHLNIKDFICDL--CGAKF 1334
C K F K L H ++H K F C CG F
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF 102
Score = 58.5 bits (142), Expect = 9e-10
Identities = 36/159 (22%), Positives = 57/159 (35%), Gaps = 29/159 (18%)
Query: 208 HTGEKGHICEICNRDFYSDAMLKRHLVKHSRMIKETSEEFVETGSITREEWYKMVLQ-RV 266
+ + C+R F + L H+ +
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTME-----------------HVGGPEQNNHVCYW 62
Query: 267 KTCPLCKKTYQSAKGMRLHIREVHSKVRPHQCK--GCGKYFKSQRHLVQHERRVHLGVKK 324
+ CP K++++ + HIR VH+ +P C GCGK F +L H +R H G K
Sbjct: 63 EECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIH-KRTHTGEKP 120
Query: 325 IKHSNFECFH--CGAKFISRTHIADHMTSHTGIKNHVCS 361
F+C C +F + + HM HT K+ S
Sbjct: 121 -----FKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 52.7 bits (127), Expect = 9e-08
Identities = 32/184 (17%), Positives = 54/184 (29%), Gaps = 37/184 (20%)
Query: 724 CGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIECEYCHN 783
G + + + C ++F+ H+ + +N
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTME-----HVGGPEQNN 57
Query: 784 TFTFETGLMGVVTRDEWEILLRDKVRICPKCNKEFYSDRTMRRHLKQVHIEIKTFSC--E 841
+ CP+ K F + + H++ VH K F C
Sbjct: 58 HVCYWEE--------------------CPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFP 96
Query: 842 ECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHY--CGITKNNKTLLRDHISAHLGIK 899
C KIFA E L+ H H G + P +C + C N + + H+ H K
Sbjct: 97 GCGKIFARSENLKIH-KRTHTGEK---P---FKCEFEGCDRRFANSSDRKKHMHVHTSDK 149
Query: 900 PYCC 903
Sbjct: 150 SGPS 153
Score = 44.6 bits (106), Expect = 5e-05
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 9/115 (7%)
Query: 131 GDRYKSGTDMRRHYRD--LHDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKF-- 186
G SG +++ + ++ P + C + F+++ + H + H+G ++
Sbjct: 1 GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60
Query: 187 ---ECAHCSKTYLSRVGLEDHINNHTGEKGHICEI--CNRDFYSDAMLKRHLVKH 236
EC K++ ++ L +HI HTGEK C C + F LK H H
Sbjct: 61 YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115
Score = 41.1 bits (97), Expect = 8e-04
Identities = 35/173 (20%), Positives = 51/173 (29%), Gaps = 48/173 (27%)
Query: 1686 GKSFTGNNHLKRHIYSVHLKRDTK---FPCRLCSQEFDTKEQRKKHERKDH--------E 1734
G S + +K+ + D P + C + F T + H +H
Sbjct: 1 GSSGSSGQPIKQEL--SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNH 58
Query: 1735 TQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELDVHNIKQHDAQP 1794
C + KY LV H H + +P
Sbjct: 59 VCYWEECPREGKSFKAKYKLVNHIRVHTGE----------------------------KP 90
Query: 1795 HTCPV--CKKIFVNKVTLAAHKKIHL---PIDKNCQCDVCGKSFARTFHLKSH 1842
CP C KIF L HK+ H P C+ + C + FA + K H
Sbjct: 91 FPCPFPGCGKIFARSENLKIHKRTHTGEKPF--KCEFEGCDRRFANSSDRKKH 141
Score = 40.0 bits (94), Expect = 0.002
Identities = 31/209 (14%), Positives = 52/209 (24%), Gaps = 70/209 (33%)
Query: 20 CAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQ-----LSV 74
Q L C ++ L H+ V
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTME---HVGGPEQNNHV 59
Query: 75 EDMYQCDICSKMFIEHHAMVKHRDWLHAIHFRSEKNLTSEEWRQLVIKNARKCPICGDRY 134
+C K F + +V H
Sbjct: 60 CYWEECPREGKSFKAKYKLVNH-------------------------------------- 81
Query: 135 KSGTDMRRH-----YRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECA 189
+R H + CP CGK F + +K H++ H G +K F+C
Sbjct: 82 -----IRVHTGEKPF--------PCPFPGCGKIFARSENLKIHKR-THTG---EKPFKCE 124
Query: 190 H--CSKTYLSRVGLEDHINNHTGEKGHIC 216
C + + + + H++ HT +K
Sbjct: 125 FEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 39.6 bits (93), Expect = 0.002
Identities = 34/145 (23%), Positives = 51/145 (35%), Gaps = 23/145 (15%)
Query: 1571 CSQEFGTKKQRKKHERKDHETRGVFSCDLCSYTSTRKYYLVKHKSRH---------IKEY 1621
KQ + E + C T + + LV H + Y
Sbjct: 3 SGSSGQPIKQELSCKWI-DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61
Query: 1622 TVFCKKCQLGFLSKNELNVHNIKQHDAQ-PHTCPV--CKKIFVNKFNLTTHKKLHL---P 1675
C + F +K +L H I+ H + P CP C KIF NL HK+ H P
Sbjct: 62 WEECPREGKSFKAKYKLVNH-IRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP 120
Query: 1676 MNRNHQCDT--CGKSFTGNNHLKRH 1698
+C+ C + F ++ K+H
Sbjct: 121 ----FKCEFEGCDRRFANSSDRKKH 141
Score = 38.8 bits (91), Expect = 0.004
Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 7/77 (9%)
Query: 1813 HKKIHLPIDKNCQCDVCGKSFARTFHLKSHISSVHLKREQRKKHERKDHETQGLFSCDLC 1872
K I + C ++F+ L +H++ H+ ++ H E C
Sbjct: 16 CKWID-EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEE------CPRE 68
Query: 1873 SYTSTQKYYLVKHKSRH 1889
+ KY LV H H
Sbjct: 69 GKSFKAKYKLVNHIRVH 85
Score = 36.5 bits (85), Expect = 0.026
Identities = 13/58 (22%), Positives = 17/58 (29%), Gaps = 8/58 (13%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLH--------LPMNRNHQCDTCGKSFTGNNHLKRHI 1699
C + F L TH + + +C GKSF L HI
Sbjct: 25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI 82
Score = 36.5 bits (85), Expect = 0.031
Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 18/93 (19%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPY---------ICHICKNSYVAAKGLKRHLKRHM 66
C +S+ +L+ H+ P C S+ A L H++ H
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH- 85
Query: 67 QATGQLSVEDMYQCDI--CSKMFIEHHAMVKHR 97
TG E + C C K+F + H+
Sbjct: 86 --TG----EKPFPCPFPGCGKIFARSENLKIHK 112
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein,
DNA- binding, transcription, C2H2-type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1
Length = 96
Score = 95.2 bits (238), Expect = 2e-23
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERP 472
+ C++CG K LK HMR HTG +P C C L H+ H+ ERP
Sbjct: 5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP 64
Query: 473 FGCEVCGSTYKYKYYLAVHMRKHTGERPYVC 503
F C++C + L VH+R HTG+
Sbjct: 65 FKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 90.9 bits (227), Expect = 6e-22
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 687 HTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGE 744
+ C +CGK + KLK HM HTG +PY C+ C L H+R H+ E
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 745 RPYMCSECGQSFAARSAFSLHLKKHAGFK 773
RP+ C C + S ++HL+ H G
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDS 91
Score = 90.2 bits (225), Expect = 1e-21
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 1059 THSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNG 1116
+ C +CGK + +L HM HTG +PY C+ C + D S L H+R H+
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61
Query: 1117 ERPFTCSECGQSFAARSAFSLHLKKHAG 1144
ERPF C C + S ++HL+ H G
Sbjct: 62 ERPFKCQICPYASRNSSQLTVHLRSHTG 89
Score = 84.8 bits (211), Expect = 9e-20
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 441 HTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGE 498
P C +CGK + KLK HM HTG +P+ C+ C L H+R H+ E
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 499 RPYVCNYCGHSFAARPAFNLHLKRHT 524
RP+ C C ++ +HL+ HT
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHT 88
Score = 84.4 bits (210), Expect = 1e-19
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 663 GNKYHSCKVCGA--EIKGSLKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERP 718
+ H C+VCG K LK HM HTG + Y C C L +H+ H+ ERP
Sbjct: 5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP 64
Query: 719 YACEICGGTFKTKWYLGVHMRKHNGERPYMC 749
+ C+IC + L VH+R H G+
Sbjct: 65 FKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 83.6 bits (208), Expect = 2e-19
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 1036 GNKCHICKVCGA--KIKGNLQQHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERP 1091
+ H C+VCG K L+ HM H+G K C C LN+H+ H+ ERP
Sbjct: 5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP 64
Query: 1092 YACEFCGSSFKDKSYLRIHIRKHNGERPFTC 1122
+ C+ C + ++ S L +H+R H G+ +
Sbjct: 65 FKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 74.8 bits (185), Expect = 3e-16
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 712 THTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAG 771
+ P+ CE+CG F K L HMR H G +PY C C + A S+ + HL+ H+
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61
Query: 772 FKQTIECEYCHNTFT 786
+ +C+ C
Sbjct: 62 ER-PFKCQICPYASR 75
Score = 73.6 bits (182), Expect = 8e-16
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 1269 FTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICD 1328
CEVCGK F +K L+ H R HTG KPY C C S+LN H ++H + + F C
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 1329 LCGAKFYEFNTYVTH 1343
+C + H
Sbjct: 69 ICPYASRNSSQLTVH 83
Score = 70.9 bits (175), Expect = 8e-15
Identities = 27/119 (22%), Positives = 40/119 (33%), Gaps = 38/119 (31%)
Query: 1085 THTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+ P+ CE CG F K L+ H+R H G +P+ C C
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDY----------------- 44
Query: 1145 SHILRRHIGYTVFCKECNIGFYSSTHLHSHGIKVH-GLPPFICEHCSKPFTSKGNLTVH 1202
S+ L+ H +++H PF C+ C + LTVH
Sbjct: 45 -------------------AAADSSSLNKH-LRIHSDERPFKCQICPYASRNSSQLTVH 83
Score = 69.8 bits (172), Expect = 2e-14
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 466 THTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+ P CEVCG + K L HMR HTG +PY C C ++ A + N HL+ H+
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS 60
Score = 65.9 bits (162), Expect = 5e-13
Identities = 28/127 (22%), Positives = 44/127 (34%), Gaps = 36/127 (28%)
Query: 598 THTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFIRNYMLRK 656
+ + +KC+VC +S LK H H G P KC C
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCH---TGVKP----YKCKTCDYAAAD------ 48
Query: 657 HLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHT 714
SL +H+ +H+ ER + C IC + +L H+ +HT
Sbjct: 49 --------------------SSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHT 88
Query: 715 GERPYAC 721
G+ +
Sbjct: 89 GDSGPSS 95
Score = 65.5 bits (161), Expect = 5e-13
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 1212 FECNICLKTFNFKTSYKRHLKQHDDSVTY---YPCTVCSKNLSSPYRLKTHMLIHANNRV 1268
+C +C K F+ K K H++ H T Y C C + L H+ IH++ R
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCH----TGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP 64
Query: 1269 FTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
F C++C L H R HTG +
Sbjct: 65 FKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 55.1 bits (134), Expect = 2e-09
Identities = 31/119 (26%), Positives = 40/119 (33%), Gaps = 34/119 (28%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPS 636
+C +CG F+ K L+ HM HTG K YKC CD + L +H H + E P
Sbjct: 10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH---SDERP-- 64
Query: 637 KIQKCPICHKIFIRNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCC 695
KC IC L H+ HTG+
Sbjct: 65 --FKCQICPYASRN--------------------------SSQLTVHLRSHTGDSGPSS 95
Score = 55.1 bits (134), Expect = 3e-09
Identities = 29/160 (18%), Positives = 42/160 (26%), Gaps = 67/160 (41%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHM 349
PH+C+ CGK F + L H R H GVK ++C C + + H+
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTH-MRCHTGVKP-----YKCKTCDYAAADSSSLNKHL 56
Query: 350 TSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRADEMYKCDKCDKLFIEQSEMV 409
H+ + +KC C
Sbjct: 57 RIHSDERP-----------------------------------FKCQICPYAS------- 74
Query: 410 QHRDWVHGDKCYLCKICGARVKSNLKAHMRIHTGERPVCC 449
R S L H+R HTG+
Sbjct: 75 -------------------RNSSQLTVHLRSHTGDSGPSS 95
Score = 46.3 bits (111), Expect = 3e-06
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 1291 HTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKFYEFNTYVTH 1343
P+ C++C K F++K L H + H +K + C C + ++ H
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH 55
Score = 44.3 bits (106), Expect = 2e-05
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVE 75
+C C +S K +L H+ HTG+KPY C C + + L +HL+ H + E
Sbjct: 10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH---SD----E 62
Query: 76 DMYQCDICSKMFIEHHAMVKHR 97
++C IC + H
Sbjct: 63 RPFKCQICPYASRNSSQLTVHL 84
Score = 44.0 bits (105), Expect = 2e-05
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHI 215
CEVCGK F+ ++K H + H G K ++C C L H+ H+ E+
Sbjct: 11 CEVCGKCFSRKDKLKTHMR-CHTG---VKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK 66
Query: 216 CEICNRDFYSDAMLKRH 232
C+IC + + L H
Sbjct: 67 CQICPYASRNSSQLTVH 83
Score = 42.8 bits (102), Expect = 6e-05
Identities = 25/115 (21%), Positives = 34/115 (29%), Gaps = 38/115 (33%)
Query: 955 KCPKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPS 1009
KC C K FS ++ H+R K +KC C L +H H S E P
Sbjct: 10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH---SDERP-- 64
Query: 1010 MIHKCPTCYKIFTENHALKKHLDWVHGNKCHICKVCGAKIKGNLQQHMETHSGEK 1064
KC C L H+ +H+G+
Sbjct: 65 --FKCQICPYASRN--------------------------SSQLTVHLRSHTGDS 91
Score = 40.5 bits (96), Expect = 3e-04
Identities = 27/116 (23%), Positives = 39/116 (33%), Gaps = 27/116 (23%)
Query: 208 HTGEKGHICEICNRDFYSDAMLKRHLVKHSRMIKETSEEFVETGSITREEWYKMVLQRVK 267
H CE+C + F LK H+ H T + YK
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCH-----------------TGVKPYK------- 38
Query: 268 TCPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
C C + + H+R +HS RP +C+ C ++ L H R H G
Sbjct: 39 -CKTCDYAAADSSSLNKHLR-IHSDERPFKCQICPYASRNSSQLTVH-LRSHTGDS 91
Score = 40.1 bits (95), Expect = 6e-04
Identities = 25/96 (26%), Positives = 33/96 (34%), Gaps = 16/96 (16%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHISSVHLKREQR 1853
PH C VC K F K L H + H K +C C + A + L H R
Sbjct: 8 PHKCEVCGKCFSRKDKLKTHMRCHTG-VKPYKCKTCDYAAADSSSLNKH---------LR 57
Query: 1854 KKHERKDHETQGLFSCDLCSYTSTQKYYLVKHKSRH 1889
+ + + C +C Y S L H H
Sbjct: 58 IHSDERPFK------CQICPYASRNSSQLTVHLRSH 87
Score = 38.6 bits (91), Expect = 0.002
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRH 1698
PH C VC K F K L TH + H P ++C TC + ++ L +H
Sbjct: 8 PHKCEVCGKCFSRKDKLKTHMRCHTGVKP----YKCKTCDYAAADSSSLNKH 55
Score = 37.8 bits (89), Expect = 0.004
Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
Query: 1625 CKKCQLGFLSKNELNVHNIKQHDAQPHTCPVCKKIFVNKFNLTTHKKLHL---PMNRNHQ 1681
C+ C F K++L H +P+ C C + +L H ++H P +
Sbjct: 11 CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP----FK 66
Query: 1682 CDTCGKSFTGNNHLKRH 1698
C C + ++ L H
Sbjct: 67 CQICPYASRNSSQLTVH 83
Score = 37.4 bits (88), Expect = 0.005
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQGIRNTG--PNQLLECHYCGITKNNKTLLRDHIS 893
CE C K F+ ++KL+ H H TG P +C C + + L H+
Sbjct: 7 GPHKCEVCGKCFSRKDKLKTHMR-CH-----TGVKP---YKCKTCDYAAADSSSLNKHLR 57
Query: 894 AHLGIKPYCCIFCEEKYFSKKS-LKRHEAKH 923
H +P+ C C S L H H
Sbjct: 58 IHSDERPFKCQIC-PYASRNSSQLTVHLRSH 87
Score = 36.2 bits (85), Expect = 0.013
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 8/93 (8%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPN 870
C C K F ++ H + H +K + C+ CD A L +H IH R P
Sbjct: 11 CEVCGKCFSRKDKLKTH-MRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHSDER---P- 64
Query: 871 QLLECHYCGITKNNKTLLRDHISAHLGIKPYCC 903
+C C N + L H+ +H G
Sbjct: 65 --FKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 33.9 bits (79), Expect = 0.072
Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 7/62 (11%)
Query: 36 SHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSKMFIEHHAMVK 95
S P+ C +C + LK H++ H TG Y+C C + ++ K
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCH---TG----VKPYKCKTCDYAAADSSSLNK 54
Query: 96 HR 97
H
Sbjct: 55 HL 56
Score = 33.6 bits (78), Expect = 0.10
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 1597 CDLCSYTSTRKYYLVKHKSRHI--KEYTVFCKKCQLGFLSKNELNVHNIKQHDAQPHTCP 1654
C++C +RK L H H K Y CK C + LN H D +P C
Sbjct: 11 CEVCGKCFSRKDKLKTHMRCHTGVKPYK--CKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 1655 VCKKIFVNKFNLTTHKKLH 1673
+C N LT H + H
Sbjct: 69 ICPYASRNSSQLTVHLRSH 87
Score = 31.2 bits (72), Expect = 0.68
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C + SQL HL SHTG
Sbjct: 66 KCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
k.12.1.1
Length = 106
Score = 95.2 bits (238), Expect = 3e-23
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Query: 431 KSNLKAHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYL 488
S ++ C CG+ L H THT ERP+ C++C ++ + +L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
H H+ E+P+ C CG F +H H
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM 97
Score = 94.8 bits (237), Expect = 4e-23
Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERP 472
K ++CK CG NL H R HT ERP C IC K + + L+DH H+ E+P
Sbjct: 14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP 73
Query: 473 FGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
F C+ CG + LAVH H
Sbjct: 74 FKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 93.7 bits (234), Expect = 9e-23
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 677 KGSLKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACEICGGTFKTKWYL 734
+ ++++ C CG+ L H THT ERPY C+IC F+ + +L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
H H+ E+P+ C ECG+ F ++H H
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100
Score = 91.7 bits (229), Expect = 4e-22
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 1050 KGNLQQHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYL 1107
+K+ C CG+ L H THT ERPY C+ C +F+ + +L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 1108 RIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
R H H+ E+PF C ECG+ F ++H H
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ 98
Score = 82.9 bits (206), Expect = 6e-19
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 14/99 (14%)
Query: 1079 LNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLH 1138
+ L ++ + C+FCG F L IH R H ERP+TC C ++F + H
Sbjct: 5 SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQD----H 60
Query: 1139 LKKHAGSHILRRHIG---YTVFCKECNIGFYSSTHLHSH 1174
L+ H H + C+EC GF S L H
Sbjct: 61 LRDH-----RYIHSKEKPFK--CQECGKGFCQSRTLAVH 92
Score = 80.9 bits (201), Expect = 3e-18
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Query: 1036 GNKCHICKVCGA--KIKGNLQQHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERP 1091
K ICK CG NL H TH+ E+ C IC K + + L +H H+ E+P
Sbjct: 14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP 73
Query: 1092 YACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ C+ CG F L +H H T +
Sbjct: 74 FKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 79.8 bits (198), Expect = 7e-18
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Query: 663 GNKYHSCKVCGA--EIKGSLKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERP 718
K CK CG +L H HT ER Y C IC K + + L++H H+ E+P
Sbjct: 14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP 73
Query: 719 YACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ C+ CG F L VH H +
Sbjct: 74 FKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 77.1 bits (191), Expect = 7e-17
Identities = 30/88 (34%), Positives = 41/88 (46%)
Query: 1256 LKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIH 1315
L + F C+ CG+ F + L H+R HT +PY CD+C K F ++ L H
Sbjct: 5 SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64
Query: 1316 RKLHLNIKDFICDLCGAKFYEFNTYVTH 1343
R +H K F C CG F + T H
Sbjct: 65 RYIHSKEKPFKCQECGKGFCQSRTLAVH 92
Score = 74.4 bits (184), Expect = 5e-16
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Query: 706 LKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLH 765
L ++ + C+ CG F + L +H R H ERPY C C ++F + H
Sbjct: 5 SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64
Query: 766 LKKHAGFKQTIECEYCHNTFT 786
H+ K +C+ C F
Sbjct: 65 RYIHSKEK-PFKCQECGKGFC 84
Score = 65.1 bits (160), Expect = 9e-13
Identities = 32/133 (24%), Positives = 47/133 (35%), Gaps = 31/133 (23%)
Query: 1168 STHLHSHGIKVH-GLPPFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTS 1226
S+ FIC+ C + FT NL +H + + + + C+IC K F +
Sbjct: 2 SSGSSGG-RLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDH 60
Query: 1227 YKRHLKQHDDSVTYYPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEE 1286
L+ H IH+ + F C+ CGKGF Q R L
Sbjct: 61 -----------------------------LRDHRYIHSKEKPFKCQECGKGFCQSRTLAV 91
Query: 1287 HKRVHTGYKPYAC 1299
HK +H
Sbjct: 92 HKTLHMQTSSPTA 104
Score = 64.0 bits (157), Expect = 3e-12
Identities = 26/134 (19%), Positives = 37/134 (27%), Gaps = 36/134 (26%)
Query: 591 TLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFI 649
K + C C ++ +L H+ H E P C ICHK F
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTH---TDERP----YTCDICHKAFR 56
Query: 650 RNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCCHICGK--KMRGKLK 707
R L++H +H+ E+ + C CGK L
Sbjct: 57 RQ--------------------------DHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA 90
Query: 708 EHMLTHTGERPYAC 721
H H
Sbjct: 91 VHKTLHMQTSSPTA 104
Score = 62.5 bits (153), Expect = 8e-12
Identities = 28/103 (27%), Positives = 35/103 (33%), Gaps = 16/103 (15%)
Query: 1104 KSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIG---YTVFCKE 1160
S ++ F C CG+ F +L H R H YT C
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSY----NLLIH-----ERTHTDERPYT--CDI 50
Query: 1161 CNIGFYSSTHLHSHGIKVH-GLPPFICEHCSKPFTSKGNLTVH 1202
C+ F HL H +H PF C+ C K F L VH
Sbjct: 51 CHKAFRRQDHLRDH-RYIHSKEKPFKCQECGKGFCQSRTLAVH 92
Score = 55.5 bits (135), Expect = 2e-09
Identities = 14/61 (22%), Positives = 24/61 (39%)
Query: 1283 YLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKFYEFNTYVT 1342
+ K + C C + FT+ L IH + H + + + CD+C F +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 1343 H 1343
H
Sbjct: 64 H 64
Score = 52.4 bits (127), Expect = 3e-08
Identities = 25/140 (17%), Positives = 39/140 (27%), Gaps = 39/140 (27%)
Query: 310 HLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCSICQSTYTT 369
R K+ F C CG F ++ H +HT + + C IC +
Sbjct: 4 GSSGG-RLPSKTKKE-----FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRR 57
Query: 370 ARGLKRHNKNHLREAGVLRADEMYKCDKCDKLFIEQSEMVQHRDWVHGDKCYLCKICGAR 429
L+ H H +E + +KC +C K F +
Sbjct: 58 QDHLRDHRYIHSKE-------KPFKCQECGKGFCQ------------------------- 85
Query: 430 VKSNLKAHMRIHTGERPVCC 449
L H +H
Sbjct: 86 -SRTLAVHKTLHMQTSSPTA 104
Score = 52.1 bits (126), Expect = 4e-08
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 269 CPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHS 328
C C + + + + +H R H+ RP+ C C K F+ Q HL H R +H K
Sbjct: 20 CKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDH-RYIHSKEKP---- 73
Query: 329 NFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
F+C CG F +A H T H + +
Sbjct: 74 -FKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 48.6 bits (117), Expect = 7e-07
Identities = 28/119 (23%), Positives = 38/119 (31%), Gaps = 34/119 (28%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPS 636
C CG F Y L H THT + Y CD+C + HL+ H+ H + E P
Sbjct: 19 ICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIH---SKEKP-- 73
Query: 637 KIQKCPICHKIFIRNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCC 695
KC C K F ++ +L H +H
Sbjct: 74 --FKCQECGKGFCQS--------------------------RTLAVHKTLHMQTSSPTA 104
Score = 40.9 bits (97), Expect = 3e-04
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVE 75
C C ++ LL H +HT +PY C IC ++ L+ H H + E
Sbjct: 19 ICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIH---SK----E 71
Query: 76 DMYQCDICSKMFIEHHAMVKHR 97
++C C K F + + H+
Sbjct: 72 KPFKCQECGKGFCQSRTLAVHK 93
Score = 40.9 bits (97), Expect = 4e-04
Identities = 31/124 (25%), Positives = 46/124 (37%), Gaps = 27/124 (21%)
Query: 200 GLEDHINNHTGEKGHICEICNRDFYSDAMLKRHLVKHSRMIKETSEEFVETGSITREEWY 259
G +K IC+ C R F +L+ H R T E Y
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHF----TKSYNLLIHER---------THTD----ERPY 46
Query: 260 KMVLQRVKTCPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVH 319
C +C K ++ +R H +HSK +P +C+ CGK F R L H + +H
Sbjct: 47 T--------CDICHKAFRRQDHLRDHRY-IHSKEKPFKCQECGKGFCQSRTLAVH-KTLH 96
Query: 320 LGVK 323
+
Sbjct: 97 MQTS 100
Score = 40.5 bits (96), Expect = 5e-04
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 955 KCPKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPS 1009
C C + F+ + H R + + CD+C + HL+ H+ H S E P
Sbjct: 19 ICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIH---SKEKP-- 73
Query: 1010 MIHKCPTCYKIFTENHALKKH 1030
KC C K F ++ L H
Sbjct: 74 --FKCQECGKGFCQSRTLAVH 92
Score = 40.1 bits (95), Expect = 7e-04
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHI 215
C+ CG+ F + H + H ++ + C C K + + L DH H+ EK
Sbjct: 20 CKFCGRHFTKSYNLLIHERT-HTD---ERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFK 75
Query: 216 CEICNRDFYSDAMLKRHLVKHSRM 239
C+ C + F R L H +
Sbjct: 76 CQECGKGFCQ----SRTLAVHKTL 95
Score = 38.6 bits (91), Expect = 0.002
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 11/95 (11%)
Query: 1609 YLVKHKSRHI--KEYTVFCKKCQLGFLSKNELNVHNIKQHDAQPHTCPVCKKIFVNKFNL 1666
+ KE+ CK C F L +H D +P+TC +C K F + +L
Sbjct: 4 GSSGGRLPSKTKKEFI--CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 1667 TTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRH 1698
H+ +H P +C CGK F + L H
Sbjct: 62 RDHRYIHSKEKP----FKCQECGKGFCQSRTLAVH 92
Score = 37.0 bits (87), Expect = 0.007
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
P+TC +C K F + L H+ IH +K +C CGK F ++ L H
Sbjct: 45 PYTCDICHKAFRRQDHLRDHRYIHSK-EKPFKCQECGKGFCQSRTLAVH 92
Score = 35.5 bits (83), Expect = 0.028
Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHI 215
C++C K F ++ HR + H +K F+C C K + L H H
Sbjct: 48 CDICHKAFRRQDHLRDHRYI-HSK---EKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT 103
Query: 216 C 216
Sbjct: 104 A 104
Score = 35.1 bits (82), Expect = 0.036
Identities = 19/71 (26%), Positives = 24/71 (33%), Gaps = 7/71 (9%)
Query: 27 KSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSKM 86
S K +IC C + + L H + H T E Y CDIC K
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTH---TD----ERPYTCDICHKA 54
Query: 87 FIEHHAMVKHR 97
F + HR
Sbjct: 55 FRRQDHLRDHR 65
Score = 33.6 bits (78), Expect = 0.14
Identities = 29/123 (23%), Positives = 39/123 (31%), Gaps = 36/123 (29%)
Query: 888 LRDHISAHLGIKPYCCIFCEEKYFSKKS-LKRHEAKHN--KVYNKAQYQDYQIQDLSMDQ 944
K + C FC ++F+K L HE H + Y
Sbjct: 5 SSGGRLPSKTKKEFICKFCG-RHFTKSYNLLIHERTHTDERPY----------------- 46
Query: 945 YRELVQSKERKCPKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKH 999
C C K F ++R H K FKC CG G+ + L HK H
Sbjct: 47 ----------TCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96
Query: 1000 MKE 1002
M+
Sbjct: 97 MQT 99
Score = 32.8 bits (76), Expect = 0.20
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 12/95 (12%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECDKIFATREKLQRHWNYIHQGIRNTG-- 868
C C + F + H ++ H + + ++C+ C K F ++ L+ H YIH +
Sbjct: 20 CKFCGRHFTKSYNLLIH-ERTHTDERPYTCDICHKAFRRQDHLRDH-RYIH-----SKEK 72
Query: 869 PNQLLECHYCGITKNNKTLLRDHISAHLGIKPYCC 903
P +C CG L H + H+
Sbjct: 73 P---FKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 31.6 bits (73), Expect = 0.50
Identities = 26/91 (28%), Positives = 32/91 (35%), Gaps = 13/91 (14%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQGIRNTG--PNQLLECHYCGITKNNKTLLRDHIS 893
K F C+ C + F L H H T P C C + LRDH
Sbjct: 16 KEFICKFCGRHFTKSYNLLIHER-TH-----TDERP---YTCDICHKAFRRQDHLRDHRY 66
Query: 894 AHLGIKPYCCIFCEEKYFSKKS-LKRHEAKH 923
H KP+ C C K F + L H+ H
Sbjct: 67 IHSKEKPFKCQEC-GKGFCQSRTLAVHKTLH 96
Score = 31.3 bits (72), Expect = 0.79
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 1595 FSCDLCSYTSTRKYYLVKHKSRHIKE--YTVFCKKCQLGFLSKNELNVHNIKQHDAQPHT 1652
F C C T+ Y L+ H+ H E YT C C F ++ L H +P
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYT--CDICHKAFRRQDHLRDHRYIHSKEKPFK 75
Query: 1653 CPVCKKIFVNKFNLTTHKKLH 1673
C C K F L HK LH
Sbjct: 76 CQECGKGFCQSRTLAVHKTLH 96
Score = 30.1 bits (69), Expect = 1.7
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 1739 FSCDLCSYTSTQKYYLVKHKSRHI--KDYNVFCKICQLGFLSKNELDVHNIKQHDAQPHT 1796
F C C T+ Y L+ H+ H + Y C IC F ++ L H +P
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYT--CDICHKAFRRQDHLRDHRYIHSKEKPFK 75
Query: 1797 CPVCKKIFVNKVTLAAHKKIH 1817
C C K F TLA HK +H
Sbjct: 76 CQECGKGFCQSRTLAVHKTLH 96
Score = 29.3 bits (67), Expect = 4.0
Identities = 5/30 (16%), Positives = 7/30 (23%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C + L H H
Sbjct: 75 KCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB
domain containing protein 22B, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 110
Score = 92.1 bits (230), Expect = 4e-22
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERP 472
GDK Y C+ CG KS HM +H G RP C +CGK K++ L HM HTG +P
Sbjct: 7 GDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP 65
Query: 473 FGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSF 510
+ C +C + ++ H + + Y +
Sbjct: 66 YECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNT 101
Score = 90.2 bits (225), Expect = 2e-21
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 686 VHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNG 743
+G++ Y C CGK + + HM H G RPY C +CG FK K +L HM+ H G
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62
Query: 744 ERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFTFETGL 791
+PY C+ C + F R S H + K + E T +G
Sbjct: 63 IKPYECNICAKRFMWRD--SFHRHVTSCTK-SYEAAKAEQNTTEASGP 107
Score = 90.2 bits (225), Expect = 2e-21
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 677 KGSLKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACEICGGTFKTKWYL 734
K HM +H G R Y C +CGK KM+ L HM HTG +PY C IC F +
Sbjct: 22 KSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF 81
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFS 763
H + + Y ++ Q+ S S
Sbjct: 82 --HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 89.4 bits (223), Expect = 4e-21
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 438 MRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKH 495
+G++ C CGK + + HM H G RP+GC VCG +K K++L HM+ H
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 496 TGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TG +PY CN C F R + H +
Sbjct: 61 TGIKPYECNICAKRFMWR--DSFHRHVTS 87
Score = 89.0 bits (222), Expect = 4e-21
Identities = 31/120 (25%), Positives = 44/120 (36%), Gaps = 19/120 (15%)
Query: 1085 THTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+G++ Y C+ CG SF KS H+ H G RP+ C CG+ F + HL H
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKH----HLVGH-- 56
Query: 1145 SHILRRHIG---YTVFCKECNIGFYSSTHLHSHGIKVH-GLPPFICEHCSKPFTSKGNLT 1200
++ H G Y C C F H H V + + T +
Sbjct: 57 ---MKIHTGIKPYE--CNICAKRFMWRDSFHRH---VTSCTKSYEAAKAEQNTTEASGPS 108
Score = 86.3 bits (215), Expect = 4e-20
Identities = 33/122 (27%), Positives = 47/122 (38%), Gaps = 19/122 (15%)
Query: 1057 METHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKH 1114
SG+K C CGK + + + HM H G RPY C CG FK K +L H++ H
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 1115 NGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIG---YTVFCKECNIGFYSSTHL 1171
G +P+ C+ C + F R S H Y + ++
Sbjct: 61 TGIKPYECNICAKRFMWRD--SFH---------RHVTSCTKSYE--AAKAEQNTTEASGP 107
Query: 1172 HS 1173
S
Sbjct: 108 SS 109
Score = 74.8 bits (185), Expect = 5e-16
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 393 YKCDKCDKLFIEQSEMVQHRDWVH-GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
Y C C K F +S+ +H +H G + Y C +CG ++K +L HM+IHTG +P C
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYEC 68
Query: 450 HICGKKLRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYLA 489
+IC K+ + H + + + +
Sbjct: 69 NICAKRFMWRDSFHRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 71.3 bits (176), Expect = 7e-15
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 1269 FTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICD 1328
+ C+ CGK F K + H +H G +PY C +C K+F K L H K+H IK + C+
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69
Query: 1329 LCGAKFYEFNTYVTHVH 1345
+C +F +++ HV
Sbjct: 70 ICAKRFMWRDSFHRHVT 86
Score = 70.2 bits (173), Expect = 2e-14
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 10/105 (9%)
Query: 1212 FECNICLKTFNFKTSYKRHLKQHDDSVTY---YPCTVCSKNLSSPYRLKTHMLIHANNRV 1268
+ C C K+F K+ RH+ H Y C VC K + L HM IH +
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMH----LGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP 65
Query: 1269 FTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLN 1313
+ C +C K F+ + H+ V + K Y + T+ S +
Sbjct: 66 YECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 66.3 bits (163), Expect = 4e-13
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 1017 CYKIFTENHALKKHLDWVH-GNKCHICKVCGA--KIKGNLQQHMETHSGEKKICCHICGK 1073
C K FT +H+ +H G + + C VCG K+K +L HM+ H+G K C+IC K
Sbjct: 15 CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAK 73
Query: 1074 KLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLR 1108
+ R + H + + Y + + S
Sbjct: 74 RFMWRDSFHRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 57.5 bits (140), Expect = 6e-10
Identities = 29/174 (16%), Positives = 49/174 (28%), Gaps = 75/174 (43%)
Query: 281 GMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFI 340
G + + + C+ CGK F + +H +HLG++ + C CG KF
Sbjct: 1 GSSGSSGD-----KLYPCQ-CGKSFTHKSQRDRH-MSMHLGLRP-----YGCGVCGKKFK 48
Query: 341 SRTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRADEMYKCDKCDK 400
+ H+ HM HTGIK Y+C+ C K
Sbjct: 49 MKHHLVGHMKIHTGIKP-----------------------------------YECNICAK 73
Query: 401 LFIEQSEMVQHRDWVHGDKCYLCKICGARVKSNLKAHMRIHTGERPVCCHICGK 454
F + + H + + + +
Sbjct: 74 RF--------------------------MWRDSF--HRHVTSCTKSYEAAKAEQ 99
Score = 48.2 bits (116), Expect = 1e-06
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 1289 RVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKF 1334
+G K Y C C K FT KS + H +HL ++ + C +CG KF
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKF 47
Score = 47.8 bits (115), Expect = 1e-06
Identities = 27/124 (21%), Positives = 36/124 (29%), Gaps = 37/124 (29%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPS 636
C CG F K HM+ H G + Y C VC + HL H H G P
Sbjct: 12 PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH---TGIKP-- 65
Query: 637 KIQKCPICHKIFIRNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCCH 696
+C IC K F+ +H V + + Y
Sbjct: 66 --YECNICAKRFMWRDSFHRH----------------------------VTSCTKSYEAA 95
Query: 697 ICGK 700
+
Sbjct: 96 KAEQ 99
Score = 39.0 bits (92), Expect = 0.001
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHI 215
C+ CGK F + +H + H+G + + C C K + + L H+ HTG K +
Sbjct: 13 CQ-CGKSFTHKSQRDRHMSM-HLG---LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYE 67
Query: 216 CEICNRDFYSDAMLKRH 232
C IC + F RH
Sbjct: 68 CNICAKRFMWRDSFHRH 84
Score = 38.6 bits (91), Expect = 0.002
Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 28/125 (22%)
Query: 738 MRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFTFETGLMGVVTR 797
+G++ Y C +CG+SF +S H+ H G + C C F + L+G
Sbjct: 2 SSGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP-YGCGVCGKKFKMKHHLVG---- 55
Query: 798 DEWEILLRDKVRI--------CPKCNKEFYSDRTMRRHLKQ-VHIEIKTFSCEECDKIFA 848
++I C C K F R + V K++ + ++
Sbjct: 56 ---------HMKIHTGIKPYECNICAKRF----MWRDSFHRHVTSCTKSYEAAKAEQNTT 102
Query: 849 TREKL 853
Sbjct: 103 EASGP 107
Score = 38.6 bits (91), Expect = 0.002
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVE 75
C C ++ KSQ H++ H GL+PY C +C + L H+K H TG
Sbjct: 12 PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH---TG----I 63
Query: 76 DMYQCDICSKMFIEH 90
Y+C+IC+K F+
Sbjct: 64 KPYECNICAKRFMWR 78
Score = 37.8 bits (89), Expect = 0.004
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRHI 1699
P+ C VC K F K +L H K+H P ++C+ C K F + RH+
Sbjct: 37 PYGCGVCGKKFKMKHHLVGHMKIHTGIKP----YECNICAKRFMWRDSFHRHV 85
Score = 37.8 bits (89), Expect = 0.005
Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 29/128 (22%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAMLKRHLVKHSRMIKET 243
K + C C K++ + + H++ H G + + C +C + F +K HLV H +
Sbjct: 9 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKF----KMKHHLVGHMK----- 58
Query: 244 SEEFVETGSITREEWYKMVLQRVKTCPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGK 303
+ TG + Y+ C +C K + H V S + ++ +
Sbjct: 59 ----IHTG----IKPYE--------CNICAKRF--MWRDSFHRH-VTSCTKSYEAAKAEQ 99
Query: 304 YFKSQRHL 311
Sbjct: 100 NTTEASGP 107
Score = 37.0 bits (87), Expect = 0.007
Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 35/139 (25%)
Query: 208 HTGEKGHICEICNRDFYSDAMLKRHLVKHSRMIKETSEEFVETGSITREEWYKMVLQRVK 267
+G+K + C+ C + F K +H + G Y
Sbjct: 5 SSGDKLYPCQ-CGKSFTH----KSQRDRHMS---------MHLG----LRPYG------- 39
Query: 268 TCPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKH 327
C +C K ++ + H++ +H+ ++P++C C K F + + V K
Sbjct: 40 -CGVCGKKFKMKHHLVGHMK-IHTGIKPYECNICAKRFMWRDSFHR---HVTSCTKS--- 91
Query: 328 SNFECFHCGAKFISRTHIA 346
+E + +
Sbjct: 92 --YEAAKAEQNTTEASGPS 108
Score = 35.9 bits (84), Expect = 0.018
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 9/75 (12%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVE 75
C C ++ K L+ H+ HTG+KPY C+IC + + RH+ +
Sbjct: 39 GCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRF----MWRDSFHRHVT-SC----T 89
Query: 76 DMYQCDICSKMFIEH 90
Y+ + E
Sbjct: 90 KSYEAAKAEQNTTEA 104
Score = 35.9 bits (84), Expect = 0.020
Identities = 25/102 (24%), Positives = 38/102 (37%), Gaps = 11/102 (10%)
Query: 814 CNKEFYSDRTMRRHLKQVHIEIKTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLL 873
C K F RH +H+ ++ + C C K F + L H IH GI+ P
Sbjct: 15 CGKSFTHKSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTGIK---P---Y 66
Query: 874 ECHYCGITKNNKTLLRDHISAHLGIKPYCCIFCEEKYFSKKS 915
EC+ C + H+ K Y E+ ++ S
Sbjct: 67 ECNICAKRFMWRDSFHRHV--TSCTKSYEAAKA-EQNTTEAS 105
Score = 35.1 bits (82), Expect = 0.037
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHI 1843
P+ C VC K F K L H KIH I K +C++C K F H+
Sbjct: 37 PYGCGVCGKKFKMKHHLVGHMKIHTGI-KPYECNICAKRFMWRDSFHRHV 85
Score = 34.0 bits (79), Expect = 0.11
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ C C K F +K H +HL + C VCGK F HL H
Sbjct: 10 LYPCQ-CGKSFTHKSQRDRHMSMHLG-LRPYGCGVCGKKFKMKHHLVGH 56
Score = 32.8 bits (76), Expect = 0.21
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHYCGITKNNKTLLRDHISAH 895
K + C+ C K F + + RH + +H G+R P C CG K L H+ H
Sbjct: 9 KLYPCQ-CGKSFTHKSQRDRHMS-MHLGLR---P---YGCGVCGKKFKMKHHLVGHMKIH 60
Query: 896 LGIKPYCCIFCEEKYFSKKS 915
GIKPY C C K F +
Sbjct: 61 TGIKPYECNIC-AKRFMWRD 79
Score = 30.5 bits (70), Expect = 1.7
Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 9/94 (9%)
Query: 1605 TRKYYLVKHKSRHIKEYTVFCKKCQLGFLSKNELNVHNIKQHDAQPHTCPVCKKIFVNKF 1664
T K +H S H+ C C F K+ L H +P+ C +C K F+ +
Sbjct: 20 THKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRD 79
Query: 1665 NLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHL 1695
+ H+ + ++ ++ T +
Sbjct: 80 SF--HRHVTSCTKS----YEAAKAEQNTTEASGP 107
Score = 29.3 bits (67), Expect = 3.7
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 8/61 (13%)
Query: 36 SHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSKMFIEHHAMVK 95
+G K Y C C S+ RH+ H G Y C +C K F H +V
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMH---LG----LRPYGCGVCGKKFKMKHHLVG 55
Query: 96 H 96
H
Sbjct: 56 H 56
Score = 28.6 bits (65), Expect = 6.7
Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Query: 1749 TQKYYLVKHKSRHI--KDYNVFCKICQLGFLSKNELDVHNIKQHDAQPHTCPVCKKIFVN 1806
T K +H S H+ + Y C +C F K+ L H +P+ C +C K F+
Sbjct: 20 THKSQRDRHMSMHLGLRPYG--CGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMW 77
Query: 1807 KVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKS 1841
+ + H+ + K+ + ++ S
Sbjct: 78 RDSF--HRHVTSC-TKSYEAAKAEQNTTEASGPSS 109
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 86
Score = 88.7 bits (221), Expect = 3e-21
Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 6/84 (7%)
Query: 433 NLKAHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGE----RPFGCEVCGSTYKYKY 486
+ + R HTGE+P C C K + + L H + F C CG T+ +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 487 YLAVHMRKHTGERPYVCNYCGHSF 510
+A H G G S
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 86.4 bits (215), Expect = 2e-20
Identities = 21/85 (24%), Positives = 28/85 (32%), Gaps = 6/85 (7%)
Query: 678 GSLKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGE----RPYACEICGGTFKTK 731
GS HTGE+ Y C C K + + L H + + C CG TF +
Sbjct: 1 GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 732 WYLGVHMRKHNGERPYMCSECGQSF 756
+ H G G S
Sbjct: 61 NTMARHADNCAGPDGVEGENSGPSS 85
Score = 85.7 bits (213), Expect = 3e-20
Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 6/85 (7%)
Query: 1051 GNLQQHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGE----RPYACEFCGSSFKDK 1104
G+ TH+GEK C C K + + L+ H + + C CG +F +
Sbjct: 1 GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 1105 SYLRIHIRKHNGERPFTCSECGQSF 1129
+ + H G G S
Sbjct: 61 NTMARHADNCAGPDGVEGENSGPSS 85
Score = 74.5 bits (184), Expect = 3e-16
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 704 GKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGE----RPYMCSECGQSFAAR 759
G THTGE+PYAC C TF+ K L +H ++++ ++CS+CG++F R
Sbjct: 1 GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 760 SAFSLHLKKHAGFKQTIECEYCHNTF 785
+ + H AG +E E +
Sbjct: 61 NTMARHADNCAGPD-GVEGENSGPSS 85
Score = 68.7 bits (169), Expect = 3e-14
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 458 GKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGE----RPYVCNYCGHSFAAR 513
G THTGE+P+ C C T++ K L +H +++ +VC+ CG +F R
Sbjct: 1 GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 514 PAFNLHLKRHT 524
H
Sbjct: 61 NTMARHADNCA 71
Score = 58.7 bits (143), Expect = 1e-10
Identities = 14/70 (20%), Positives = 20/70 (28%), Gaps = 4/70 (5%)
Query: 1241 YPCTVCSKNLSSPYRLKTHMLIH----ANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKP 1296
Y C+ C K L H + F C CGK F ++ + H G
Sbjct: 16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75
Query: 1297 YACDLCSKQF 1306
+
Sbjct: 76 VEGENSGPSS 85
Score = 57.5 bits (140), Expect = 3e-10
Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Query: 1107 LRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIGYTVFCKECNIGFY 1166
R H GE+P+ CS C ++F + +H K++ + + + C +C F
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPA--AFV--CSKCGKTFT 58
Query: 1167 SSTHLHSHGIKVH-GLPPFICEHCSKPF 1193
+ H G E+
Sbjct: 59 RRNTMARH-ADNCAGPDGVEGENSGPSS 85
Score = 57.2 bits (139), Expect = 4e-10
Identities = 15/68 (22%), Positives = 23/68 (33%), Gaps = 6/68 (8%)
Query: 393 YKCDKCDKLFIEQSEMVQHR----DWVHGDKCYLCKICGA--RVKSNLKAHMRIHTGERP 446
Y C CDK F ++ + H D ++C CG ++ + H G
Sbjct: 16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75
Query: 447 VCCHICGK 454
V G
Sbjct: 76 VEGENSGP 83
Score = 56.8 bits (138), Expect = 5e-10
Identities = 20/123 (16%), Positives = 36/123 (29%), Gaps = 45/123 (36%)
Query: 488 LAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHTERGDVRHIECQHSLKIIEYKIYQ 547
R HTGE+PY C++C +F + ++H KR+ + +
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD-------------PNFVPAAF- 48
Query: 548 WISIENWFKIKRENVPSTKDQSHKKRDQKIECNICGALFATKYTLQDHMNTHTGNK-YKC 606
C+ CG F + T+ H + G +
Sbjct: 49 ------------------------------VCSKCGKTFTRRNTMARHADNCAGPDGVEG 78
Query: 607 DVC 609
+
Sbjct: 79 ENS 81
Score = 56.4 bits (137), Expect = 8e-10
Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 1284 LEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH----LNIKDFICDLCGAKFYEFNT 1339
R HTG KPYAC C K F QK L++H K + F+C CG F NT
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 1340 YVTH 1343
H
Sbjct: 63 MARH 66
Score = 53.7 bits (130), Expect = 6e-09
Identities = 19/111 (17%), Positives = 28/111 (25%), Gaps = 30/111 (27%)
Query: 591 TLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFI 649
+ THTG K Y C CD + + L H ++ + C C K F
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRY---HDPNFVPAAFVCSKCGKTFT 58
Query: 650 RNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCCHICGK 700
R + ++ H G G
Sbjct: 59 R--------------------------RNTMARHADNCAGPDGVEGENSGP 83
Score = 49.4 bits (119), Expect = 2e-07
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 734 LGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTI---ECEYCHNTFT 786
G R H GE+PY CS C ++F + +H K++ C C TFT
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFT 58
Score = 48.3 bits (116), Expect = 5e-07
Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Query: 283 RLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISR 342
R H+ +P+ C C K F+ ++ L H +R + + F C CG F R
Sbjct: 4 GSSGR-THTGEKPYACSHCDKTFRQKQLLDMHFKR-YHD-PNFVPAAFVCSKCGKTFTRR 60
Query: 343 THIADHMTSHTGIKNHVCSIC 363
+A H + G
Sbjct: 61 NTMARHADNCAGPDGVEGENS 81
Score = 44.8 bits (107), Expect = 9e-06
Identities = 18/68 (26%), Positives = 24/68 (35%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHI 215
C C K F + + H K H F C+ C KT+ R + H +N G G
Sbjct: 18 CSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVE 77
Query: 216 CEICNRDF 223
E
Sbjct: 78 GENSGPSS 85
Score = 43.7 bits (104), Expect = 2e-05
Identities = 19/97 (19%), Positives = 27/97 (27%), Gaps = 17/97 (17%)
Query: 310 HLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTG----IKNHVCSICQS 365
R H G K + C HC F + + H + VCS C
Sbjct: 2 SSGSSGR-THTGEKP-----YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGK 55
Query: 366 TYTTARGLKRHNKNHLREAGVLRADEMYKCDKCDKLF 402
T+T + RH N G + +
Sbjct: 56 TFTRRNTMARHADNCAGPDG-------VEGENSGPSS 85
Score = 42.1 bits (100), Expect = 8e-05
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLH---LPMNRNHQCDTCGKSFTGNNHLKRH 1698
P+ C C K F K L H K + + C CGK+FT N + RH
Sbjct: 15 PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66
Score = 42.1 bits (100), Expect = 9e-05
Identities = 17/89 (19%), Positives = 27/89 (30%), Gaps = 13/89 (14%)
Query: 991 HLKRHKIKHMKESGELPPSMIHKCPTCYKIFTENHALKKHL----DWVHGNKCHICKVCG 1046
H +GE P + C C K F + L H D +C CG
Sbjct: 2 SSGSSGRTH---TGEKP----YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCG 54
Query: 1047 AKI--KGNLQQHMETHSGEKKICCHICGK 1073
+ + +H + +G + G
Sbjct: 55 KTFTRRNTMARHADNCAGPDGVEGENSGP 83
Score = 41.0 bits (97), Expect = 2e-04
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIH---LPIDKNCQCDVCGKSFARTFHLKSH 1842
P+ C C K F K L H K + + C CGK+F R + H
Sbjct: 15 PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66
Score = 40.6 bits (96), Expect = 2e-04
Identities = 26/114 (22%), Positives = 33/114 (28%), Gaps = 35/114 (30%)
Query: 1170 HLHSHGIKVH-GLPPFICEHCSKPFTSKGNLTVHVKYYHAKTL----FECNICLKTFNFK 1224
S G + H G P+ C HC K F K L +H K YH F C+ C KTF +
Sbjct: 2 SSGSSG-RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 1225 TSYKRHLKQHDDSVTYYPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGF 1278
+ + H A E G
Sbjct: 61 NT-----------------------------MARHADNCAGPDGVEGENSGPSS 85
Score = 39.8 bits (94), Expect = 4e-04
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 30 LLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSKMFIE 89
+HTG KPY C C ++ + L H KR+ V + C C K F
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRY---HDPNFVPAAFVCSKCGKTFTR 59
Query: 90 HHAMVKH 96
+ M +H
Sbjct: 60 RNTMARH 66
Score = 38.7 bits (91), Expect = 0.001
Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 11/76 (14%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTG----LKPYICHICKNSYVAAKGLKRHLKRHMQATGQ 71
C HC + K L H + ++C C ++ + RH G
Sbjct: 17 ACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNC---AG- 72
Query: 72 LSVEDMYQCDICSKMF 87
D + +
Sbjct: 73 ---PDGVEGENSGPSS 85
Score = 37.1 bits (87), Expect = 0.004
Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 9/74 (12%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLL---ECHYCGITKNNKTLLRDHI 892
K ++C CDK F ++ L H+ + PN + C CG T + + H
Sbjct: 14 KPYACSHCDKTFRQKQLLDMHFK-RY-----HDPNFVPAAFVCSKCGKTFTRRNTMARHA 67
Query: 893 SAHLGIKPYCCIFC 906
G
Sbjct: 68 DNCAGPDGVEGENS 81
Score = 34.8 bits (81), Expect = 0.033
Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 22/105 (20%)
Query: 201 LEDHINNHTGEKGHICEICNRDFYSDAMLKRHLVKHSRMIKETSEEFVETGSITREEWYK 260
HTGEK + C C++ F K+ L H + +
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQ----KQLLDMHFK---------RYHDPNFVPAAFV 49
Query: 261 MVLQRVKTCPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYF 305
C C KT+ M H + + + G
Sbjct: 50 --------CSKCGKTFTRRNTMARHAD-NCAGPDGVEGENSGPSS 85
Score = 33.3 bits (77), Expect = 0.10
Identities = 20/102 (19%), Positives = 29/102 (28%), Gaps = 28/102 (27%)
Query: 888 LRDHISAHLGIKPYCCIFCEEKYFSKKS-LKRHEAKHNKVYNKAQYQDYQIQDLSMDQYR 946
H G KPY C C +K F +K L H +++
Sbjct: 3 SGSSGRTHTGEKPYACSHC-DKTFRQKQLLDMHFKRYH---------------------D 40
Query: 947 ELVQSKERKCPKCEKEFSTPRYMRKHLR-----KKFKCDVCG 983
C KC K F+ M +H + + G
Sbjct: 41 PNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG 82
Score = 32.1 bits (74), Expect = 0.28
Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 7/70 (10%)
Query: 1769 CKICQLGFLSKNELDVHNIKQH-----DAQPHTCPVCKKIFVNKVTLAAHKKIHLPIDKN 1823
C C F K LD+H K++ C C K F + T+A H
Sbjct: 18 CSHCDKTFRQKQLLDMHF-KRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAG-PDG 75
Query: 1824 CQCDVCGKSF 1833
+ + G S
Sbjct: 76 VEGENSGPSS 85
Score = 32.1 bits (74), Expect = 0.30
Identities = 14/73 (19%), Positives = 22/73 (30%), Gaps = 13/73 (17%)
Query: 1625 CKKCQLGFLSKNELNVHNIKQH-----DAQPHTCPVCKKIFVNKFNLTTHKKLHL---PM 1676
C C F K L++H K++ C C K F + + H
Sbjct: 18 CSHCDKTFRQKQLLDMHF-KRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG- 75
Query: 1677 NRNHQCDTCGKSF 1689
+ + G S
Sbjct: 76 ---VEGENSGPSS 85
Score = 30.2 bits (69), Expect = 1.4
Identities = 13/76 (17%), Positives = 21/76 (27%), Gaps = 16/76 (21%)
Query: 955 KCPKCEKEFSTPRYMRKHLR---------KKFKCDVCGNGYTSVKHLKRHKIKHMKESGE 1005
C C+K F + + H + F C CG +T + RH +G
Sbjct: 17 ACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNC---AGP 73
Query: 1006 LPPSMIHKCPTCYKIF 1021
+
Sbjct: 74 DG----VEGENSGPSS 85
Score = 29.8 bits (68), Expect = 1.7
Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 8/59 (13%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGE----KGHICEICNRDFYSDAMLKRHLVKHSR 238
K + C+HC KT+ + L+ H + +C C + F + + +H+
Sbjct: 14 KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTR----RNTMARHAD 68
Score = 28.3 bits (64), Expect = 5.7
Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 5/50 (10%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVH----IEIKTFSCEECDKIFATREKLQRH 856
C C+K F + + H + + F C +C K F R + RH
Sbjct: 18 CSHCDKTFRQKQLLDMH-FKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1
Length = 95
Score = 87.2 bits (217), Expect = 1e-20
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 441 HTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGE 498
+G V C ICGK + L H L+H+GE+P+ C VCG +K K ++ H+R H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 499 --RPYVCNYCGHSFAARPAFNLHLKR-HT 524
+PY+C CG F+ N H+K+ H+
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHS 90
Score = 86.8 bits (216), Expect = 2e-20
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 1060 HSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGE 1117
SG + C ICGK + LN H L+H+GE+PY+C CG FK K + H+R H+G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 1118 --RPFTCSECGQSFAARSAFSLHLKK-HAG 1144
+P+ C CG+ F+ + H+K+ H+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 86.0 bits (214), Expect = 3e-20
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 687 HTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGE 744
+G C ICGK + L H L+H+GE+PY+C +CG FK K + H+R H+G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 745 --RPYMCSECGQSFAARSAFSLHLKK-HAGFK 773
+PY+C CG+ F+ + H+K+ H+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 82.2 bits (204), Expect = 8e-19
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 1086 HTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGS 1145
+G ACE CG F+D +L H H+GE+P++C CG F + S H++ H GS
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 1146 HILRRHIGYTVFCKECNIGFYSSTHLHSHGIKVH 1179
Y C+ C GF HL+ H +VH
Sbjct: 62 ----VGKPYI--CQSCGKGFSRPDHLNGHIKQVH 89
Score = 78.3 bits (194), Expect = 2e-17
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 1241 YPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTG--YKPYA 1298
C +C K Y L H L H+ + ++C VCG F +K + H R H G KPY
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 1299 CDLCSKQFTQKSTLNIHRK 1317
C C K F++ LN H K
Sbjct: 68 CQSCGKGFSRPDHLNGHIK 86
Score = 77.9 bits (193), Expect = 2e-17
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGE-- 470
G C+ICG R +L H H+GE+P C +CG K + ++ H+ +H G
Sbjct: 4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG 63
Query: 471 RPFGCEVCGSTYKYKYYLAVHMRK-HTGER 499
+P+ C+ CG + +L H+++ H+G
Sbjct: 64 KPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 76.0 bits (188), Expect = 1e-16
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 1269 FTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHL--NIKDFI 1326
CE+CGK F +L HK H+G KPY+C +C +F +K ++ H + H K +I
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 1327 CDLCGAKFYEFNTYVTHVHETH 1348
C CG F + H+ + H
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVH 89
Score = 71.0 bits (175), Expect = 6e-15
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 713 HTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAG- 771
+G ACEICG F+ ++L H H+GE+PY C CG F + S H++ H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 772 FKQTIECEYCHNTFT 786
+ C+ C F+
Sbjct: 62 VGKPYICQSCGKGFS 76
Score = 64.4 bits (158), Expect = 1e-12
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 663 GNKYHSCKVCGA--EIKGSLKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGE-- 716
G+ +C++CG L H + H+GE+ Y C +CG K + ++ H+ +H G
Sbjct: 4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG 63
Query: 717 RPYACEICGGTFKTKWYLGVHMRK-HNGER 745
+PY C+ CG F +L H+++ H+G
Sbjct: 64 KPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 52.9 bits (128), Expect = 2e-08
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPS 636
C ICG +F Y L H +H+G K Y C VC + + H H +G
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH---DGS--VG 63
Query: 637 KIQKCPICHKIFIRNYMLRKHLDFVH 662
K C C K F R L H+ VH
Sbjct: 64 KPYICQSCGKGFSRPDHLNGHIKQVH 89
Score = 51.3 bits (124), Expect = 5e-08
Identities = 25/116 (21%), Positives = 39/116 (33%), Gaps = 32/116 (27%)
Query: 1183 PFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTSYKRHLKQHDDSVTYYP 1242
CE C K F +L H + + + C +C F K
Sbjct: 7 GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDR---------------- 50
Query: 1243 CTVCSKNLSSPYRLKTHMLIHA--NNRVFTCEVCGKGFIQKRYLEEH-KRVHTGYK 1295
+ H+ H + + C+ CGKGF + +L H K+VH+G
Sbjct: 51 -------------MSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 49.4 bits (119), Expect = 2e-07
Identities = 33/145 (22%), Positives = 47/145 (32%), Gaps = 58/145 (40%)
Query: 975 KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPSMIHKCPTCYKIFTENHALKKHLDWV 1034
C++CG + V HL RHK+ H SGE P + CP C F
Sbjct: 6 SGVACEICGKIFRDVYHLNRHKLSH---SGEKP----YSCPVCGLRFKR----------- 47
Query: 1035 HGNKCHICKVCGAKIKGNLQQHMETHSGEKKICCHICGKKLRGRLNEHMLTHTGERPYAC 1094
K + H+ +H G +PY C
Sbjct: 48 ---------------KDRMSYHVRSHDGSV------------------------GKPYIC 68
Query: 1095 EFCGSSFKDKSYLRIHIRK-HNGER 1118
+ CG F +L HI++ H+G
Sbjct: 69 QSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 49.0 bits (118), Expect = 4e-07
Identities = 30/125 (24%), Positives = 43/125 (34%), Gaps = 39/125 (31%)
Query: 599 HTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFIRNYMLRKH 657
+G+ C++C + + HL RHK+ H +GE P CP+C F R
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSH---SGEKP----YSCPVCGLRFKR------- 47
Query: 658 LDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERK--YCCHICGK--KMRGKLKEHM-LT 712
K + H+ H G Y C CGK L H+
Sbjct: 48 -------------------KDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQV 88
Query: 713 HTGER 717
H+G
Sbjct: 89 HSGPS 93
Score = 47.5 bits (114), Expect = 1e-06
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 1291 HTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKF 1334
+G AC++C K F LN H+ H K + C +CG +F
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRF 45
Score = 47.1 bits (113), Expect = 2e-06
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 28/118 (23%)
Query: 208 HTGEKGHICEICNRDFYSDAMLKRHLVKHSRMIKETSEEFVETGSITREEWYKMVLQRVK 267
+G G CEIC + F L RH + H + E+ Y
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSH-----------------SGEKPYS------- 37
Query: 268 TCPLCKKTYQSAKGMRLHIREVHS--KVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
CP+C ++ M H+R H +P+ C+ CGK F HL H ++VH G
Sbjct: 38 -CPVCGLRFKRKDRMSYHVR-SHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 44.4 bits (106), Expect = 1e-05
Identities = 25/125 (20%), Positives = 36/125 (28%), Gaps = 37/125 (29%)
Query: 741 HNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFTFETGLMGVVTRDEW 800
+G C CG+ F + H H+G K +
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEK------------PYS------------ 37
Query: 801 EILLRDKVRICPKCNKEFYSDRTMRRHLKQVHI--EIKTFSCEECDKIFATREKLQRHWN 858
CP C F M H + H K + C+ C K F+ + L H
Sbjct: 38 ----------CPVCGLRFKRKDRMSYH-VRSHDGSVGKPYICQSCGKGFSRPDHLNGHIK 86
Query: 859 YIHQG 863
+H G
Sbjct: 87 QVHSG 91
Score = 43.2 bits (103), Expect = 4e-05
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHL-PIDKNCQCDVCGKSFARTFHLKSHISSVH 1847
P++CPVC F K ++ H + H + K C CGK F+R HL HI VH
Sbjct: 35 PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89
Score = 42.9 bits (102), Expect = 5e-05
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 1625 CKKCQLGFLSKNELNVHNIKQHDAQPHTCPVCKKIFVNKFNLTTHKKLHL-PMNRNHQCD 1683
C+ C F LN H + +P++CPVC F K ++ H + H + + + C
Sbjct: 10 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 1684 TCGKSFTGNNHLKRHIYSVH 1703
+CGK F+ +HL HI VH
Sbjct: 70 SCGKGFSRPDHLNGHIKQVH 89
Score = 39.8 bits (94), Expect = 6e-04
Identities = 22/88 (25%), Positives = 31/88 (35%), Gaps = 9/88 (10%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVE 75
C C + L H SH+G KPY C +C + + H++ H G
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH---DG----S 61
Query: 76 DM--YQCDICSKMFIEHHAMVKHRDWLH 101
Y C C K F + H +H
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVH 89
Score = 39.4 bits (93), Expect = 7e-04
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 12/87 (13%)
Query: 955 KCPKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELP-P 1008
C C K F ++ +H K + C VCG + + H H G + P
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH---DGSVGKP 65
Query: 1009 SMIHKCPTCYKIFTENHALKKHLDWVH 1035
+ C +C K F+ L H+ VH
Sbjct: 66 ---YICQSCGKGFSRPDHLNGHIKQVH 89
Score = 39.4 bits (93), Expect = 8e-04
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
C +C KIF + L HK H +K C VCG F R + H
Sbjct: 7 GVACEICGKIFRDVYHLNRHKLSHSG-EKPYSCPVCGLRFKRKDRMSYH 54
Score = 36.3 bits (85), Expect = 0.011
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 4/88 (4%)
Query: 126 KCPICGDRYKSGTDMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKK 185
C ICG ++ + RH H + C VCG RF R+ H + H G K
Sbjct: 9 ACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDG-SVGKP 65
Query: 186 FECAHCSKTYLSRVGLEDHINN-HTGEK 212
+ C C K + L HI H+G
Sbjct: 66 YICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 33.6 bits (78), Expect = 0.099
Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 15/89 (16%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQGIRNTG--PNQLLECHYCGITKNNKTLLRDHIS 893
+CE C KIF L RH H +G P C CG+ K + H+
Sbjct: 6 SGVACEICGKIFRDVYHLNRHKL-SH-----SGEKP---YSCPVCGLRFKRKDRMSYHVR 56
Query: 894 AHLG--IKPYCCIFCEEKYFSKKS-LKRH 919
+H G KPY C C K FS+ L H
Sbjct: 57 SHDGSVGKPYICQSC-GKGFSRPDHLNGH 84
Score = 32.8 bits (76), Expect = 0.17
Identities = 26/112 (23%), Positives = 32/112 (28%), Gaps = 38/112 (33%)
Query: 894 AHLGIKPYCCIFCEEKYFSKKS-LKRHEAKHN--KVYNKAQYQDYQIQDLSMDQYRELVQ 950
G C C K F L RH+ H+ K Y
Sbjct: 1 GSSGSSGVACEICG-KIFRDVYHLNRHKLSHSGEKPY----------------------- 36
Query: 951 SKERKCPKCEKEFSTPRYMRKHLR-------KKFKCDVCGNGYTSVKHLKRH 995
CP C F M H+R K + C CG G++ HL H
Sbjct: 37 ----SCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGH 84
Score = 32.5 bits (75), Expect = 0.22
Identities = 16/60 (26%), Positives = 20/60 (33%), Gaps = 7/60 (11%)
Query: 37 HTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSKMFIEHHAMVKH 96
+G C IC + L RH H +G E Y C +C F M H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSH---SG----EKPYSCPVCGLRFKRKDRMSYH 54
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 77
Score = 85.7 bits (213), Expect = 3e-20
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 433 NLKAHMRIHTGERPVCCHICGKKL--RGKLKDHMLTHTGE--RPFGCEVCGSTYKYKYYL 488
+ + R H+GE+P C+IC + G +K H+L E F C C + K L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 489 AVHMRK-HTGERPY 501
VH+RK H+ P
Sbjct: 62 GVHLRKQHSYSGPS 75
Score = 81.4 bits (202), Expect = 8e-19
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 678 GSLKEHMIVHTGERKYCCHICGKK--MRGKLKEHMLTHTGE--RPYACEICGGTFKTKWY 733
GS H+GE+ Y C+IC + G +K H+L E + C C K
Sbjct: 1 GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60
Query: 734 LGVHMRK-HNGERPY 747
LGVH+RK H+ P
Sbjct: 61 LGVHLRKQHSYSGPS 75
Score = 80.3 bits (199), Expect = 2e-18
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 1051 GNLQQHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGE--RPYACEFCGSSFKDKSY 1106
G+ THSGEK C+IC + G + H+L E + C C + KS
Sbjct: 1 GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60
Query: 1107 LRIHIRK-HNGERPFT 1121
L +H+RK H+ P +
Sbjct: 61 LGVHLRKQHSYSGPSS 76
Score = 78.7 bits (195), Expect = 9e-18
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 1077 GRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGE--RPFTCSECGQSFAARSA 1134
G TH+GE+PY C C + F +++HI + + E F C C A +S
Sbjct: 1 GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60
Query: 1135 FSLHLKKH 1142
+HL+K
Sbjct: 61 LGVHLRKQ 68
Score = 75.6 bits (187), Expect = 8e-17
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 704 GKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGE--RPYMCSECGQSFAARSA 761
G TH+GE+PY C IC F + +H+ + + E + C C A +S
Sbjct: 1 GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60
Query: 762 FSLHLKKH 769
+HL+K
Sbjct: 61 LGVHLRKQ 68
Score = 74.5 bits (184), Expect = 2e-16
Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 3/67 (4%)
Query: 1256 LKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTG--YKPYACDLCSKQFTQKSTLN 1313
+ H+ + + C +C F Q ++ H + C C +KS L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 1314 IH-RKLH 1319
+H RK H
Sbjct: 63 VHLRKQH 69
Score = 71.4 bits (176), Expect = 3e-15
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 458 GKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGE--RPYVCNYCGHSFAARPA 515
G TH+GE+P+ C +C + + + +H+ + E + C +C A +
Sbjct: 1 GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60
Query: 516 FNLHLKR-HT 524
+HL++ H+
Sbjct: 61 LGVHLRKQHS 70
Score = 62.9 bits (154), Expect = 3e-12
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 1284 LEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHL--NIKDFICDLCGAKFYEFNTYV 1341
R H+G KPY C +C +FTQ T+ +H N+ F C C +
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 1342 THVHETH 1348
H+ + H
Sbjct: 63 VHLRKQH 69
Score = 59.1 bits (144), Expect = 6e-11
Identities = 20/101 (19%), Positives = 29/101 (28%), Gaps = 34/101 (33%)
Query: 1107 LRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIGYTVFCKECNIGFY 1166
R H+GE+P+ C C F +K H + + V
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSG----TMKMH-----ILQKHTENV---------- 43
Query: 1167 SSTHLHSHGIKVHGLPPFICEHCSKPFTSKGNLTVHVKYYH 1207
F C HC K +L VH++ H
Sbjct: 44 ---------------AKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 56.0 bits (136), Expect = 7e-10
Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 1241 YPCTVCSKNLSSPYRLKTHMLIH--ANNRVFTCEVCGKGFIQKRYLEEH-KRVHTGYKPY 1297
Y C +C + +K H+L N F C C +K L H ++ H+ P
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75
Query: 1298 A 1298
+
Sbjct: 76 S 76
Score = 54.1 bits (131), Expect = 3e-09
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 591 TLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFI 649
+ TH+G K Y+C +C ++ +K H ++ + E CP C +
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQK---HTE--NVAKFHCPHCDTVIA 56
Query: 650 RNYMLRKHLDFVH 662
R L HL H
Sbjct: 57 RKSDLGVHLRKQH 69
Score = 49.8 bits (120), Expect = 1e-07
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 663 GNKYHSCKVCGAE--IKGSLKEHMIVHTGE--RKYCCHICGK--KMRGKLKEHMLT-HTG 715
G K + C +C A G++K H++ E K+ C C + L H+ H+
Sbjct: 12 GEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71
Query: 716 ERPYA 720
P +
Sbjct: 72 SGPSS 76
Score = 45.6 bits (109), Expect = 3e-06
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK---YKCDVCDNGYSSLKHLKRH 622
EC IC A F T++ H+ + C CD + L H
Sbjct: 17 ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVH 64
Score = 45.6 bits (109), Expect = 3e-06
Identities = 10/55 (18%), Positives = 15/55 (27%), Gaps = 1/55 (1%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLH-LPMNRNHQCDTCGKSFTGNNHLKRHIYSVH 1703
P+ C +C F + H C C + L H+ H
Sbjct: 15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 45.6 bits (109), Expect = 3e-06
Identities = 13/55 (23%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIH-LPIDKNCQCDVCGKSFARTFHLKSHISSVH 1847
P+ C +C F T+ H C C AR L H+ H
Sbjct: 15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 44.4 bits (106), Expect = 1e-05
Identities = 19/117 (16%), Positives = 29/117 (24%), Gaps = 47/117 (40%)
Query: 488 LAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHTERGDVRHIECQHSLKIIEYKIYQ 547
R H+GE+PY C C F +H+ +
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQK------------------------ 38
Query: 548 WISIENWFKIKRENVPSTKDQSHKKRDQKIECNICGALFATKYTLQDHM-NTHTGNK 603
H + K C C + A K L H+ H+ +
Sbjct: 39 ----------------------HTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73
Score = 43.3 bits (103), Expect = 3e-05
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 1170 HLHSHGIKVH-GLPPFICEHCSKPFTSKGNLTVHVKYYHAKTL--FECNICLKTFNFKTS 1226
S + H G P+ C C FT G + +H+ H + + F C C K+
Sbjct: 2 SSGSS-GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60
Query: 1227 YKRHLKQH 1234
HL++
Sbjct: 61 LGVHLRKQ 68
Score = 42.1 bits (100), Expect = 6e-05
Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 6/73 (8%)
Query: 285 HIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTH 344
R HS +P++C C F + H + H F C HC ++
Sbjct: 6 SGR-THSGEKPYECYICHARFTQSGTMKMHILQKHTENVA----KFHCPHCDTVIARKSD 60
Query: 345 IADHM-TSHTGIK 356
+ H+ H+
Sbjct: 61 LGVHLRKQHSYSG 73
Score = 41.0 bits (97), Expect = 1e-04
Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 10/71 (14%)
Query: 970 RKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPSMIHKCPTCYKIFTEN 1024
R K ++C +C +T +K H ++ E CP C +
Sbjct: 4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQK---HTENVAK--FHCPHCDTVIARK 58
Query: 1025 HALKKHLDWVH 1035
L HL H
Sbjct: 59 SDLGVHLRKQH 69
Score = 41.0 bits (97), Expect = 2e-04
Identities = 17/54 (31%), Positives = 22/54 (40%)
Query: 1680 HQCDTCGKSFTGNNHLKRHIYSVHLKRDTKFPCRLCSQEFDTKEQRKKHERKDH 1733
++C C FT + +K HI H + KF C C K H RK H
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 40.2 bits (95), Expect = 3e-04
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 9/71 (12%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDM--YQCDICSKMFIEH 90
+H+G KPY C+IC + + +K H+ + E++ + C C +
Sbjct: 6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQK---HT----ENVAKFHCPHCDTVIARK 58
Query: 91 HAMVKHRDWLH 101
+ H H
Sbjct: 59 SDLGVHLRKQH 69
Score = 39.8 bits (94), Expect = 4e-04
Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHI-NNHTGEK 212
C +C RF +K H + KF C HC + L H+ H+
Sbjct: 18 CYICHARFTQSGTMKMHILQ-KHT-ENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73
Score = 39.8 bits (94), Expect = 4e-04
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVHIE-IKTFSCEECDKIFATREKLQRHWNYIHQG 863
C C+ F TM+ H+ Q H E + F C CD + A + L H H
Sbjct: 18 CYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71
Score = 39.8 bits (94), Expect = 4e-04
Identities = 12/58 (20%), Positives = 19/58 (32%), Gaps = 3/58 (5%)
Query: 268 TCPLCKKTYQSAKGMRLHIREVHS--KVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
C +C + + M++HI V C C + L H R+ H
Sbjct: 17 ECYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73
Score = 37.9 bits (89), Expect = 0.002
Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTG--LKPYICHICKNSYVAAKGLKRHLKRH 65
EC+ C R++ + H+ + + C C L HL++
Sbjct: 17 ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQ 68
Score = 36.7 bits (86), Expect = 0.005
Identities = 14/73 (19%), Positives = 22/73 (30%), Gaps = 8/73 (10%)
Query: 310 HLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTG--IKNHVCSICQSTY 367
R H G K +EC+ C A+F + H+ + C C +
Sbjct: 2 SSGSSGR-THSGEKP-----YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVI 55
Query: 368 TTARGLKRHNKNH 380
L H +
Sbjct: 56 ARKSDLGVHLRKQ 68
Score = 35.6 bits (83), Expect = 0.013
Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGE--KGHICEICNRDFYSDAMLKRHL 233
K +EC C + ++ HI E C C+ + L HL
Sbjct: 14 KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65
Score = 33.3 bits (77), Expect = 0.087
Identities = 17/93 (18%), Positives = 25/93 (26%), Gaps = 33/93 (35%)
Query: 888 LRDHISAHLGIKPYCCIFCEEKYFSKKS-LKRHEAKH----NKVYNKAQYQDYQIQDLSM 942
H G KPY C C F++ +K H + +
Sbjct: 3 SGSSGRTHSGEKPYECYICH-ARFTQSGTMKMHILQKHTENVAKF--------------- 46
Query: 943 DQYRELVQSKERKCPKCEKEFSTPRYMRKHLRK 975
CP C+ + + HLRK
Sbjct: 47 ------------HCPHCDTVIARKSDLGVHLRK 67
Score = 31.0 bits (71), Expect = 0.48
Identities = 17/89 (19%), Positives = 25/89 (28%), Gaps = 22/89 (24%)
Query: 61 HLKRHMQA-TGQLSVEDMYQCDICSKMFIEHHAMVKHRDWLHAIHFRSEKNLTSEEWRQL 119
+ +G E Y+C IC F + M H +E +
Sbjct: 2 SSGSSGRTHSG----EKPYECYICHARFTQSGTMKMHI----LQK-------HTENVAKF 46
Query: 120 VIKNARKCPICGDRYKSGTDMRRHYRDLH 148
CP C +D+ H R H
Sbjct: 47 ------HCPHCDTVIARKSDLGVHLRKQH 69
Score = 30.6 bits (70), Expect = 0.71
Identities = 10/58 (17%), Positives = 16/58 (27%), Gaps = 3/58 (5%)
Query: 126 KCPICGDRYKSGTDMRRHYRDLHDSTRKCP--CEVCGKRFNSIKRVKQHRKVVHMGIK 181
+C IC R+ M+ H + C C + H + H
Sbjct: 17 ECYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73
Score = 29.4 bits (67), Expect = 1.7
Identities = 13/68 (19%), Positives = 21/68 (30%), Gaps = 6/68 (8%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHYCGITKNNKTLLRDHI-SA 894
K + C C F ++ H ++T C +C K+ L H+
Sbjct: 14 KPYECYICHARFTQSGTMKM-----HILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQ 68
Query: 895 HLGIKPYC 902
H P
Sbjct: 69 HSYSGPSS 76
Score = 28.3 bits (64), Expect = 4.3
Identities = 10/29 (34%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 16 ECHHCAMRYSSKSQLLDHL-NSHTGLKPY 43
C HC + KS L HL H+ P
Sbjct: 47 HCPHCDTVIARKSDLGVHLRKQHSYSGPS 75
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
protein, transcription/DNA complex; HET: DNA; 1.60A {Mus
musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A
1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A*
1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Length = 90
Score = 83.7 bits (208), Expect = 2e-19
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 1241 YPCTV--CSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYA 1298
Y C V C + S L H+ IH + F C +C + F + +L H R HTG KP+A
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 1299 CDLCSKQFTQKSTLNIHRKLH 1319
CD+C ++F + H K+H
Sbjct: 65 CDICGRKFARSDERKRHTKIH 85
Score = 83.3 bits (207), Expect = 3e-19
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 1071 CGKK--LRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQS 1128
C ++ G L H+ HTG++P+ C C +F +L HIR H GE+PF C CG+
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 1129 FAARSAFSLHLKKHAG 1144
FA H K H
Sbjct: 72 FARSDERKRHTKIHLR 87
Score = 82.5 bits (205), Expect = 5e-19
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 432 SNLKAHMRIHTGERPVCCHICGKK--LRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYLA 489
+L H+RIHTG++P C IC + L H+ THTGE+PF C++CG +
Sbjct: 20 GSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK 79
Query: 490 VHMRKHTGER 499
H + H ++
Sbjct: 80 RHTKIHLRQK 89
Score = 81.7 bits (203), Expect = 1e-18
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 690 ERKYCCHI--CGKK--MRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGER 745
ER Y C + C ++ G L H+ HTG++P+ C IC F +L H+R H GE+
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 746 PYMCSECGQSFAARSAFSLHLKKHAGFKQ 774
P+ C CG+ FA H K H K
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHLRQKD 90
Score = 77.5 bits (192), Expect = 3e-17
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 444 ERPVCCHI--CGKK--LRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGER 499
ERP C + C ++ G L H+ HTG++PF C +C + +L H+R HTGE+
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 500 PYVCNYCGHSFAARPAFNLHLKRHT 524
P+ C+ CG FA H K H
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHL 86
Score = 77.1 bits (191), Expect = 4e-17
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1051 GNLQQHMETHSGEKKICCHICGKK--LRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLR 1108
G+L +H+ H+G+K C IC + L H+ THTGE+P+AC+ CG F +
Sbjct: 20 GSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK 79
Query: 1109 IHIRKHNGER 1118
H + H ++
Sbjct: 80 RHTKIHLRQK 89
Score = 76.4 bits (189), Expect = 7e-17
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 678 GSLKEHMIVHTGERKYCCHICGKK--MRGKLKEHMLTHTGERPYACEICGGTFKTKWYLG 735
GSL H+ +HTG++ + C IC + L H+ THTGE+P+AC+ICG F
Sbjct: 20 GSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK 79
Query: 736 VHMRKHNGER 745
H + H ++
Sbjct: 80 RHTKIHLRQK 89
Score = 57.5 bits (140), Expect = 3e-10
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 1212 FECNI--CLKTFNFKTSYKRHLKQHDDSVTY---YPCTVCSKNLSSPYRLKTHMLIHANN 1266
+ C + C + F+ S RH++ H T + C +C +N S L TH+ H
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIH----TGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 1267 RVFTCEVCGKGFIQKRYLEEHKRVHTGYK 1295
+ F C++CG+ F + + H ++H K
Sbjct: 61 KPFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 52.9 bits (128), Expect = 1e-08
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 18/94 (19%)
Query: 1117 ERPFTC--SECGQSFAARSAFSLHLKKHAGSHILRRHIG---YTVFCKECNIGFYSSTHL 1171
ERP+ C C + F+ L +H +R H G + C+ C F S HL
Sbjct: 2 ERPYACPVESCDRRFSQSG----SLTRH-----IRIHTGQKPFQ--CRICMRNFSRSDHL 50
Query: 1172 HSHGIKVH-GLPPFICEHCSKPFTSKGNLTVHVK 1204
+H I+ H G PF C+ C + F H K
Sbjct: 51 TTH-IRTHTGEKPFACDICGRKFARSDERKRHTK 83
Score = 51.7 bits (125), Expect = 4e-08
Identities = 26/111 (23%), Positives = 38/111 (34%), Gaps = 34/111 (30%)
Query: 582 CGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQK 640
C F+ +L H+ HTG K ++C +C +S HL H H GE P
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH---TGEKP----FA 64
Query: 641 CPICHKIFIRNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGER 691
C IC + F R+ K H +H ++
Sbjct: 65 CDICGRKFARS--------------------------DERKRHTKIHLRQK 89
Score = 50.5 bits (122), Expect = 8e-08
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 153 KCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEK 212
CP E C +RF+ + +H ++ H G +K F+C C + + L HI HTGEK
Sbjct: 6 ACPVESCDRRFSQSGSLTRHIRI-HTG---QKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 213 GHICEICNRDFYSDAMLKRH 232
C+IC R F KRH
Sbjct: 62 PFACDICGRKFARSDERKRH 81
Score = 47.8 bits (115), Expect = 8e-07
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 294 RPHQCKG--CGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTS 351
RP+ C C + F L +H R+H G K F+C C F H+ H+ +
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRH-IRIHTGQKP-----FQCRICMRNFSRSDHLTTHIRT 56
Query: 352 HTGIKNHVCSICQSTYTTARGLKRHNKNHLRE 383
HTG K C IC + + KRH K HLR+
Sbjct: 57 HTGEKPFACDICGRKFARSDERKRHTKIHLRQ 88
Score = 47.5 bits (114), Expect = 1e-06
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQE 629
+C IC F+ L H+ THTG K + CD+C ++ KRH HL++
Sbjct: 36 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQ 88
Score = 47.1 bits (113), Expect = 1e-06
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 9/92 (9%)
Query: 268 TCPL--CKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKI 325
CP+ C + + + + HIR +H+ +P QC+ C + F HL H R H G K
Sbjct: 6 ACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTH-IRTHTGEKP- 62
Query: 326 KHSNFECFHCGAKFISRTHIADHMTSHTGIKN 357
F C CG KF H H K+
Sbjct: 63 ----FACDICGRKFARSDERKRHTKIHLRQKD 90
Score = 45.9 bits (110), Expect = 4e-06
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 1154 YTVFCKECNIGFYSSTHLHSHGIKVH-GLPPFICEHCSKPFTSKGNLTVHVKYYHAKTLF 1212
Y + C+ F S L H I++H G PF C C + F+ +LT H++ + + F
Sbjct: 5 YACPVESCDRRFSQSGSLTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 1213 ECNICLKTFNFKTSYKRHLKQH 1234
C+IC + F KRH K H
Sbjct: 64 ACDICGRKFARSDERKRHTKIH 85
Score = 43.6 bits (104), Expect = 2e-05
Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 40/117 (34%)
Query: 955 KCPK--CEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELP 1007
CP C++ FS + +H+R K F+C +C ++ HL H H +GE P
Sbjct: 6 ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH---TGEKP 62
Query: 1008 PSMIHKCPTCYKIFTENHALKKHLDWVHGNKCHICKVCGAKIKGNLQQHMETHSGEK 1064
C C + F + ++H + H +K
Sbjct: 63 ----FACDICGRKFARS--------------------------DERKRHTKIHLRQK 89
Score = 42.8 bits (102), Expect = 5e-05
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 19 HCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMY 78
C R+S L H+ HTG KP+ C IC ++ + L H++ H TG E +
Sbjct: 11 SCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH---TG----EKPF 63
Query: 79 QCDICSKMFIEHHAMVKHR 97
CDIC + F +H
Sbjct: 64 ACDICGRKFARSDERKRHT 82
Score = 38.2 bits (90), Expect = 0.002
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
P C +C + F L H + H +K CD+CG+ FAR+ K H
Sbjct: 34 PFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGRKFARSDERKRH 81
Score = 37.8 bits (89), Expect = 0.003
Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEK 212
C +C + F+ + H + H G +K F C C + + + H H +K
Sbjct: 37 CRICMRNFSRSDHLTTHIRT-HTG---EKPFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 36.7 bits (86), Expect = 0.008
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+C C +S L H+ +HTG KP+ C IC + + KRH K H
Sbjct: 36 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85
Score = 35.5 bits (83), Expect = 0.016
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 1794 PHTCPV--CKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHI 1843
P+ CPV C + F +L H +IH K QC +C ++F+R+ HL +HI
Sbjct: 4 PYACPVESCDRRFSQSGSLTRHIRIHTG-QKPFQCRICMRNFSRSDHLTTHI 54
Score = 35.5 bits (83), Expect = 0.020
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
Query: 1650 PHTCPV--CKKIFVNKFNLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRHI 1699
P+ CPV C + F +LT H ++H P QC C ++F+ ++HL HI
Sbjct: 4 PYACPVESCDRRFSQSGSLTRHIRIHTGQKP----FQCRICMRNFSRSDHLTTHI 54
Score = 31.3 bits (72), Expect = 0.60
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 15/93 (16%)
Query: 836 KTFSC--EECDKIFATREKLQRHWNYIHQGIRNTG--PNQLLECHYCGITKNNKTLLRDH 891
+ ++C E CD+ F+ L RH IH TG P +C C + L H
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIR-IH-----TGQKP---FQCRICMRNFSRSDHLTTH 53
Query: 892 ISAHLGIKPYCCIFCEEKYFSKKS-LKRHEAKH 923
I H G KP+ C C + F++ KRH H
Sbjct: 54 IRTHTGEKPFACDIC-GRKFARSDERKRHTKIH 85
Score = 29.7 bits (68), Expect = 1.9
Identities = 26/119 (21%), Positives = 40/119 (33%), Gaps = 45/119 (37%)
Query: 744 ERPYMC--SECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFTFETGLMGVVTRDEWE 801
ERPY C C + F+ + + H++ H G
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTG------------------------------ 31
Query: 802 ILLRDKVRICPKCNKEFYSDRTMRRHLKQVHIEIKT----FSCEECDKIFATREKLQRH 856
K C C + F + HL HI T F+C+ C + FA ++ +RH
Sbjct: 32 ----QKPFQCRICMRNF----SRSDHLTT-HIRTHTGEKPFACDICGRKFARSDERKRH 81
Score = 29.4 bits (67), Expect = 2.8
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK 603
C+ICG FA + H H K
Sbjct: 64 ACDICGRKFARSDERKRHTKIHLRQK 89
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast
structural genomics consortiu PSI-biology, protein
structure initiative; NMR {Homo sapiens}
Length = 74
Score = 81.3 bits (202), Expect = 7e-19
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 430 VKSNLKAHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCEVCGSTYKYKYY 487
+ + H + ++P C C + +G L H HTGE+P+ C +CG+ +
Sbjct: 1 MGHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPAN 60
Query: 488 LAVHMRKHTGERPY 501
L H R H+GE+PY
Sbjct: 61 LKTHTRIHSGEKPY 74
Score = 75.2 bits (186), Expect = 1e-16
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 679 SLKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGV 736
H + ++ Y C C + +G L H HTGE+PY C ICG F L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 737 HMRKHNGERPY 747
H R H+GE+PY
Sbjct: 64 HTRIHSGEKPY 74
Score = 74.8 bits (185), Expect = 2e-16
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 1079 LNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLH 1138
+ H ++PY C+ C +SF+ K L H H GE+P+ C+ CG F + H
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Query: 1139 LKKHAG 1144
+ H+G
Sbjct: 65 TRIHSG 70
Score = 73.3 bits (181), Expect = 5e-16
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 1256 LKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIH 1315
H + +++ + C+ C F K L HK VHTG KPY C++C QF + + L H
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Query: 1316 RKLH 1319
++H
Sbjct: 65 TRIH 68
Score = 72.9 bits (180), Expect = 9e-16
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 706 LKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLH 765
H ++PY C+ C +F+ K L H H GE+PY C+ CG F + H
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Query: 766 LKKHAGFK 773
+ H+G K
Sbjct: 65 TRIHSGEK 72
Score = 71.3 bits (176), Expect = 3e-15
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 1052 NLQQHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRI 1109
+ H +K C C + +G L H HTGE+PY C CG+ F + L+
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 1110 HIRKHNGERPF 1120
H R H+GE+P+
Sbjct: 64 HTRIHSGEKPY 74
Score = 68.6 bits (169), Expect = 2e-14
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 460 LKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLH 519
H ++P+ C+ C ++++YK LA H HTGE+PY CN CG F H
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Query: 520 LKRHT 524
+ H+
Sbjct: 65 TRIHS 69
Score = 58.2 bits (142), Expect = 1e-10
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERP 472
DK Y C C A R K NL +H +HTGE+P C+ICG LK H H+GE+P
Sbjct: 14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73
Query: 473 F 473
+
Sbjct: 74 Y 74
Score = 54.8 bits (133), Expect = 2e-09
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 1241 YPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPY 1297
Y C C + L +H +H + + C +CG F + L+ H R+H+G KPY
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74
Score = 50.9 bits (123), Expect = 4e-08
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 663 GNKYHSCKVCGA--EIKGSLKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERP 718
+K + C C A KG+L H VHTGE+ Y C+ICG LK H H+GE+P
Sbjct: 14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73
Query: 719 Y 719
Y
Sbjct: 74 Y 74
Score = 47.8 bits (115), Expect = 5e-07
Identities = 16/73 (21%), Positives = 25/73 (34%), Gaps = 14/73 (19%)
Query: 1105 SYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIG---YTVFCKEC 1161
+ H + ++P+ C C SF + +L H H G Y C C
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKG----NLASHK-----TVHTGEKPYR--CNIC 51
Query: 1162 NIGFYSSTHLHSH 1174
F +L +H
Sbjct: 52 GAQFNRPANLKTH 64
Score = 45.1 bits (108), Expect = 4e-06
Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Query: 733 YLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFT 786
+ H + ++PY C C SF + + H H G K C C F
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEK-PYRCNICGAQFN 56
Score = 44.4 bits (106), Expect = 9e-06
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 569 SHKKRDQKI-------ECNICGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLK 620
H + +C+ C A F K L H HTG K Y+C++C ++ +LK
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 621 RHKMKH 626
H H
Sbjct: 63 THTRIH 68
Score = 42.8 bits (102), Expect = 3e-05
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADH 348
+ +P++C C F+ + +L H + VH G K + C CGA+F ++ H
Sbjct: 11 MTHSDKPYKCDRCQASFRYKGNLASH-KTVHTGEKP-----YRCNICGAQFNRPANLKTH 64
Query: 349 MTSHTGIK 356
H+G K
Sbjct: 65 TRIHSGEK 72
Score = 42.4 bits (101), Expect = 4e-05
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 487 YLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+ H ++PY C+ C SF + H HT
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHT 41
Score = 41.7 bits (99), Expect = 9e-05
Identities = 22/67 (32%), Positives = 29/67 (43%)
Query: 1168 STHLHSHGIKVHGLPPFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTSY 1227
H H H H P+ C+ C F KGNL H + + + CNIC FN +
Sbjct: 2 GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANL 61
Query: 1228 KRHLKQH 1234
K H + H
Sbjct: 62 KTHTRIH 68
Score = 41.3 bits (98), Expect = 9e-05
Identities = 26/103 (25%), Positives = 35/103 (33%), Gaps = 34/103 (33%)
Query: 592 LQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFIR 650
H + +K YKCD C + +L HK H GE P +C IC F R
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVH---TGEKP----YRCNICGAQFNR 57
Query: 651 NYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKY 693
+LK H +H+GE+ Y
Sbjct: 58 --------------------------PANLKTHTRIHSGEKPY 74
Score = 40.1 bits (95), Expect = 2e-04
Identities = 28/137 (20%), Positives = 39/137 (28%), Gaps = 67/137 (48%)
Query: 310 HLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCSICQSTYTT 369
H H + K ++C C A F + ++A H T HTG K
Sbjct: 4 HHHHH-SHMTHSDKP-----YKCDRCQASFRYKGNLASHKTVHTGEKP------------ 45
Query: 370 ARGLKRHNKNHLREAGVLRADEMYKCDKCDKLFIEQSEMVQHRDWVHGDKCYLCKICGAR 429
Y+C+ C F
Sbjct: 46 -----------------------YRCNICGAQFNR------------------------- 57
Query: 430 VKSNLKAHMRIHTGERP 446
+NLK H RIH+GE+P
Sbjct: 58 -PANLKTHTRIHSGEKP 73
Score = 38.6 bits (91), Expect = 0.001
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
P+ C C+ F K LA+HK +H +K +C++CG F R +LK+H
Sbjct: 17 PYKCDRCQASFRYKGNLASHKTVHTG-EKPYRCNICGAQFNRPANLKTH 64
Score = 38.2 bits (90), Expect = 0.001
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRH 1698
P+ C C+ F K NL +HK +H P ++C+ CG F +LK H
Sbjct: 17 PYKCDRCQASFRYKGNLASHKTVHTGEKP----YRCNICGAQFNRPANLKTH 64
Score = 35.1 bits (82), Expect = 0.016
Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 7/70 (10%)
Query: 28 SQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSKMF 87
H + KPY C C+ S+ L H H TG E Y+C+IC F
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVH---TG----EKPYRCNICGAQF 55
Query: 88 IEHHAMVKHR 97
+ H
Sbjct: 56 NRPANLKTHT 65
Score = 34.7 bits (81), Expect = 0.024
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEK 212
C+ C F + H+ V H G +K + C C + L+ H H+GEK
Sbjct: 20 CDRCQASFRYKGNLASHKTV-HTG---EKPYRCNICGAQFNRPANLKTHTRIHSGEK 72
Score = 34.4 bits (80), Expect = 0.035
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAMLKRH 232
K ++C C ++ + L H HTGEK + C IC F A LK H
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Score = 33.6 bits (78), Expect = 0.060
Identities = 23/90 (25%), Positives = 30/90 (33%), Gaps = 33/90 (36%)
Query: 975 KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPSMIHKCPTCYKIFTENHALKKHLDWV 1034
K +KCD C + +L HK H +GE P ++C C F
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKTVH---TGEKP----YRCNICGAQFNR----------- 57
Query: 1035 HGNKCHICKVCGAKIKGNLQQHMETHSGEK 1064
NL+ H HSGEK
Sbjct: 58 ---------------PANLKTHTRIHSGEK 72
Score = 33.2 bits (77), Expect = 0.076
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 955 KCPKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELP 1007
KC +C+ F + H K ++C++CG + +LK H H SGE P
Sbjct: 19 KCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH---SGEKP 73
Score = 33.2 bits (77), Expect = 0.080
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+C C + K L H HTG KPY C+IC + LK H + H
Sbjct: 19 KCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68
Score = 32.0 bits (74), Expect = 0.18
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 269 CPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
C C+ +++ + H VH+ +P++C CG F +L H R+H G K
Sbjct: 20 CDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANLKTH-TRIHSGEK 72
Score = 30.5 bits (70), Expect = 0.63
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK 603
CNICGA F L+ H H+G K
Sbjct: 47 RCNICGAQFNRPANLKTHTRIHSGEK 72
Score = 29.3 bits (67), Expect = 1.8
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHYCGITKNNKTLLRDHISAH 895
K + C+ C F + L H +H G + C+ CG N L+ H H
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKT-VHTG------EKPYRCNICGAQFNRPANLKTHTRIH 68
Query: 896 LGIKPY 901
G KPY
Sbjct: 69 SGEKPY 74
Score = 28.6 bits (65), Expect = 3.0
Identities = 17/65 (26%), Positives = 25/65 (38%)
Query: 1609 YLVKHKSRHIKEYTVFCKKCQLGFLSKNELNVHNIKQHDAQPHTCPVCKKIFVNKFNLTT 1668
+ H + C +CQ F K L H +P+ C +C F NL T
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 1669 HKKLH 1673
H ++H
Sbjct: 64 HTRIH 68
Score = 28.2 bits (64), Expect = 4.3
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 7/37 (18%)
Query: 1665 NLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRH 1698
+ H + P ++CD C SF +L H
Sbjct: 4 HHHHHSHMTHSDKP----YKCDRCQASFRYKGNLASH 36
Score = 27.8 bits (63), Expect = 6.3
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 874 ECHYCGITKNNKTLLRDHISAHLGIKPYCCIFCEEKYFSKKS-LKRHEAKH 923
+C C + K L H + H G KPY C C F++ + LK H H
Sbjct: 19 KCDRCQASFRYKGNLASHKTVHTGEKPYRCNIC-GAQFNRPANLKTHTRIH 68
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
protein-DNA complex, DNA-B metal-binding, nucleus; HET:
DNA; NMR {Rattus norvegicus}
Length = 82
Score = 80.9 bits (201), Expect = 1e-18
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 1068 CHICGK--KLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSEC 1125
C ICGK K L+ H+L H+ RPY C++CG F KS ++ H H GE+P C C
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 1126 GQSFAARSAFSLHLKKHAG 1144
G++F+ S H +KH G
Sbjct: 64 GKAFSQSSNLITHSRKHTG 82
Score = 80.2 bits (199), Expect = 3e-18
Identities = 34/81 (41%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 421 YLCKICGA--RVKSNLKAHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCE 476
+ CKICG + S L H+ IH+ RP C CGK + +K H HTGE+P C+
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 477 VCGSTYKYKYYLAVHMRKHTG 497
VCG + L H RKHTG
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 78.6 bits (195), Expect = 9e-18
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 693 YCCHICGK--KMRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ C ICGK K L H+L H+ RPY C+ CG F K + H H GE+P+ C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 751 ECGQSFAARSAFSLHLKKHAG 771
CG++F+ S H +KH G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 77.5 bits (192), Expect = 2e-17
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 1241 YPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACD 1300
+ C +C K+ L TH+LIH++ R + C+ CGK F QK +++H +HTG KP+ C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 1301 LCSKQFTQKSTLNIHRKLH 1319
+C K F+Q S L H + H
Sbjct: 62 VCGKAFSQSSNLITHSRKH 80
Score = 72.5 bits (179), Expect = 1e-15
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 449 CHICGK--KLRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYC 506
C ICGK K L H+L H+ RP+ C+ CG + K + H HTGE+P+ C C
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 507 GHSFAARPAFNLHLKRHT 524
G +F+ H ++HT
Sbjct: 64 GKAFSQSSNLITHSRKHT 81
Score = 59.7 bits (146), Expect = 4e-11
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 14/86 (16%)
Query: 1092 YACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRH 1151
+ C+ CG SFK S L H+ H+ RP+ C CG+ F +S +KKH H
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKS----DMKKHT-----FIH 52
Query: 1152 IG---YTVFCKECNIGFYSSTHLHSH 1174
G + C+ C F S++L +H
Sbjct: 53 TGEKPHK--CQVCGKAFSQSSNLITH 76
Score = 54.7 bits (133), Expect = 2e-09
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 719 YACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIEC 778
+ C+ICG +FK L H+ H+ RPY C CG+ F +S H H G K +C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEK-PHKC 60
Query: 779 EYCHNTFT 786
+ C F+
Sbjct: 61 QVCGKAFS 68
Score = 54.4 bits (132), Expect = 3e-09
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 1212 FECNICLKTFNFKTSYKRHLKQHDDSVTY---YPCTVCSKNLSSPYRLKTHMLIHANNRV 1268
F+C IC K+F ++ HL H + YPC C K +K H IH +
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIH----SDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP 57
Query: 1269 FTCEVCGKGFIQKRYLEEHKRVHTG 1293
C+VCGK F Q L H R HTG
Sbjct: 58 HKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 52.4 bits (127), Expect = 1e-08
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 473 FGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
F C++CG ++K L+ H+ H+ RPY C YCG F + H HT
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHT 53
Score = 47.4 bits (114), Expect = 9e-07
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 297 QCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIK 356
CK CGK FK L H +H + + C +CG +F ++ + H HTG K
Sbjct: 3 DCKICGKSFKRSSTLSTH-LLIHSDTRP-----YPCQYCGKRFHQKSDMKKHTFIHTGEK 56
Query: 357 NHVCSICQSTYTTARGLKRHNKNH 380
H C +C ++ + L H++ H
Sbjct: 57 PHKCQVCGKAFSQSSNLITHSRKH 80
Score = 47.0 bits (113), Expect = 1e-06
Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 39/117 (33%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRA 389
F+C CG F + ++ H+ H+ +
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRP-------------------------------- 29
Query: 390 DEMYKCDKCDKLFIEQSEMVQHRDWVH-GDKCYLCKICGA--RVKSNLKAHMRIHTG 443
Y C C K F ++S+M +H +H G+K + C++CG SNL H R HTG
Sbjct: 30 ---YPCQYCGKRFHQKSDMKKHTF-IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 45.9 bits (110), Expect = 3e-06
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 640 KCPICHKIFIRNYMLRKHLDFVH-GNKYHSCKVCGA--EIKGSLKEHMIVHTGERKYCCH 696
C IC K F R+ L HL +H + + C+ CG K +K+H +HTGE+ + C
Sbjct: 3 DCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 697 ICGK--KMRGKLKEHMLTHTG 715
+CGK L H HTG
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 44.7 bits (107), Expect = 9e-06
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPS 636
+C ICG F TL H+ H+ + Y C C + +K+H H GE P
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH---TGEKP-- 57
Query: 637 KIQKCPICHKIFIRNYMLRKH 657
KC +C K F ++ L H
Sbjct: 58 --HKCQVCGKAFSQSSNLITH 76
Score = 44.3 bits (106), Expect = 1e-05
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 30/107 (28%)
Query: 1013 KCPTCYKIFTENHALKKHLDWVH-GNKCHICKVCGA--KIKGNLQQHMETHSGEKKICCH 1069
C C K F + L HL +H + + C+ CG K ++++H
Sbjct: 3 DCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFI---------- 51
Query: 1070 ICGKKLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNG 1116
HTGE+P+ C+ CG +F S L H RKH G
Sbjct: 52 ----------------HTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 41.6 bits (99), Expect = 9e-05
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHI 215
C++CGK F + H + H + + C +C K + + ++ H HTGEK H
Sbjct: 4 CKICGKSFKRSSTLSTHLLI-HSD---TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK 59
Query: 216 CEICNRDFYSDAMLKRHLVKHSRM 239
C++C + F +L+ HSR
Sbjct: 60 CQVCGKAFSQ----SSNLITHSRK 79
Score = 40.5 bits (96), Expect = 2e-04
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVE 75
+C C + S L HL H+ +PY C C + +K+H H TG E
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH---TG----E 55
Query: 76 DMYQCDICSKMFIEHHAMVKH 96
++C +C K F + ++ H
Sbjct: 56 KPHKCQVCGKAFSQSSNLITH 76
Score = 37.8 bits (89), Expect = 0.002
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 955 KCPKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPS 1009
C C K F + HL + + C CG + +K+H H +GE P
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH---TGEKP-- 57
Query: 1010 MIHKCPTCYKIFTENHALKKH 1030
HKC C K F+++ L H
Sbjct: 58 --HKCQVCGKAFSQSSNLITH 76
Score = 36.6 bits (86), Expect = 0.006
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1625 CKKCQLGFLSKNELNVHNIKQHDAQPHTCPVCKKIFVNKFNLTTHKKLHL---PMNRNHQ 1681
CK C F + L+ H + D +P+ C C K F K ++ H +H P H+
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP----HK 59
Query: 1682 CDTCGKSFTGNNHLKRH 1698
C CGK+F+ +++L H
Sbjct: 60 CQVCGKAFSQSSNLITH 76
Score = 34.3 bits (80), Expect = 0.034
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 837 TFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHYCGITKNNKTLLRDHISAHL 896
+F C+ C K F L H IH R P C YCG + K+ ++ H H
Sbjct: 1 SFDCKICGKSFKRSSTLSTHLL-IHSDTR---P---YPCQYCGKRFHQKSDMKKHTFIHT 53
Query: 897 GIKPYCCIFCEEKYFSKKS-LKRHEAKH 923
G KP+ C C K FS+ S L H KH
Sbjct: 54 GEKPHKCQVC-GKAFSQSSNLITHSRKH 80
Score = 33.9 bits (79), Expect = 0.047
Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 55/136 (40%)
Query: 186 FECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAMLKRHLVKHSRMIKETSE 245
F+C C K++ L H+ H+ + + C+ C + F K + KH+
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRF----HQKSDMKKHTF------- 50
Query: 246 EFVETGSITREEWYKMVLQRVKTCPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYF 305
+H+ +PH+C+ CGK F
Sbjct: 51 -------------------------------------------IHTGEKPHKCQVCGKAF 67
Query: 306 KSQRHLVQHERRVHLG 321
+L+ H R H G
Sbjct: 68 SQSSNLITH-SRKHTG 82
Score = 32.8 bits (76), Expect = 0.15
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 126 KCPICGDRYKSGTDMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKK 185
C ICG +K + + H +H TR PC+ CGKRF+ +K+H + H G +K
Sbjct: 3 DCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFI-HTG---EKP 57
Query: 186 FECAHCSKTYLSRVGLEDHINNHTG 210
+C C K + L H HTG
Sbjct: 58 HKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 30.1 bits (69), Expect = 1.1
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Query: 955 KCPKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKH 999
C C K F M+KH K KC VCG ++ +L H KH
Sbjct: 31 PCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80
Score = 29.3 bits (67), Expect = 2.4
Identities = 24/79 (30%), Positives = 32/79 (40%)
Query: 1595 FSCDLCSYTSTRKYYLVKHKSRHIKEYTVFCKKCQLGFLSKNELNVHNIKQHDAQPHTCP 1654
F C +C + R L H H C+ C F K+++ H +PH C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 1655 VCKKIFVNKFNLTTHKKLH 1673
VC K F NL TH + H
Sbjct: 62 VCGKAFSQSSNLITHSRKH 80
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
binding, transcription, C2H2 type zinc finger, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 70
Score = 79.9 bits (198), Expect = 3e-18
Identities = 22/60 (36%), Positives = 28/60 (46%)
Query: 1085 THTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+ + P C C S K+ LRIH R H +RPF C+ C S S H+KK G
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 78.7 bits (195), Expect = 6e-18
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 712 THTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAG 771
+ + P C C + +K L +H R H +RP+ C+ C S S H+KK G
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Query: 772 FKQTIEC 778
Sbjct: 63 DMSGPSS 69
Score = 74.8 bits (185), Expect = 2e-16
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 466 THTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+ + P C C + K L +H R H +RP+ CNYC + H+K+
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Score = 68.7 bits (169), Expect = 2e-14
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 1269 FTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
C C K L H+R+H +P+ C+ CS Q S L+ H K
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 68.3 bits (168), Expect = 3e-14
Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Query: 686 VHTGERKYCCHICGKKMRGK--LKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNG 743
+ C C K L+ H H +RP+ C C K L HM+K +G
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Query: 744 ERPYMCS 750
+ S
Sbjct: 63 DMSGPSS 69
Score = 68.3 bits (168), Expect = 3e-14
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 1059 THSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNG 1116
+ S C C + L H H +RP+ C +C K S L H++K +G
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Query: 1117 ERPFTCS 1123
+ S
Sbjct: 63 DMSGPSS 69
Score = 68.3 bits (168), Expect = 3e-14
Identities = 18/65 (27%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Query: 439 RIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHT 496
+ P C C K L+ H H +RPF C C K L+ HM+K
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 497 GERPY 501
G+
Sbjct: 62 GDMSG 66
Score = 57.9 bits (141), Expect = 1e-10
Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Query: 417 GDKCYLCKICG--ARVKSNLKAHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGE 470
C C K+ L+ H RIH +RP C+ C K L HM G+
Sbjct: 6 SGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63
Score = 51.7 bits (125), Expect = 2e-08
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 1289 RVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKF 1334
+ P C CS + K+ L IH ++H + F C+ C
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDT 47
Score = 51.3 bits (124), Expect = 3e-08
Identities = 17/59 (28%), Positives = 23/59 (38%)
Query: 1241 YPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
C+ CS + SS L+ H IH +R F C C Q L +H + G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68
Score = 51.0 bits (123), Expect = 4e-08
Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
+C+ C ++K L+ H H ++ +KC+ C +L +H K
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 49.0 bits (118), Expect = 2e-07
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 739 RKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFT 786
+ P CSEC S ++++A +H + H + +C YC
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDR-PFKCNYCSFDTK 48
Score = 47.5 bits (114), Expect = 7e-07
Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 4/63 (6%)
Query: 663 GNKYHSCKVCG--AEIKGSLKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERP 718
C C K +L+ H +H +R + C+ C K L +HM G+
Sbjct: 6 SGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65
Query: 719 YAC 721
Sbjct: 66 GPS 68
Score = 46.0 bits (110), Expect = 2e-06
Identities = 18/93 (19%), Positives = 28/93 (30%), Gaps = 36/93 (38%)
Query: 1112 RKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIGYTVFCKECNIGFYSSTHL 1171
+ P CSEC S ++++A +H + H
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDR------------------------- 36
Query: 1172 HSHGIKVHGLPPFICEHCSKPFTSKGNLTVHVK 1204
PF C +CS NL+ H+K
Sbjct: 37 -----------PFKCNYCSFDTKQPSNLSKHMK 58
Score = 42.9 bits (102), Expect = 3e-05
Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 6/73 (8%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADH 348
S P +C C S+ L HE R+H + F+C +C ++++ H
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHE-RIHCTDRP-----FKCNYCSFDTKQPSNLSKH 56
Query: 349 MTSHTGIKNHVCS 361
M G + S
Sbjct: 57 MKKFHGDMSGPSS 69
Score = 42.1 bits (100), Expect = 5e-05
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 493 RKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+ P C+ C +S +++ A +H + H
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHC 33
Score = 39.4 bits (93), Expect = 4e-04
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+C C+ SSK+ L H H +P+ C+ C L +H+K+
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 37.9 bits (89), Expect = 0.002
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
P C C +K L H++IH D+ +C+ C + +L H
Sbjct: 9 PEKCSECSYSCSSKAALRIHERIHCT-DRPFKCNYCSFDTKQPSNLSKH 56
Score = 37.5 bits (88), Expect = 0.002
Identities = 16/94 (17%), Positives = 28/94 (29%), Gaps = 33/94 (35%)
Query: 351 SHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRADEMYKCDKCDKLFIEQSEMVQ 410
S + CS C + ++ L+ H + H + +KC+ C +
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTD-------RPFKCNYCSFDTKQ------ 49
Query: 411 HRDWVHGDKCYLCKICGARVKSNLKAHMRIHTGE 444
SNL HM+ G+
Sbjct: 50 --------------------PSNLSKHMKKFHGD 63
Score = 36.7 bits (86), Expect = 0.004
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 8/65 (12%)
Query: 1003 SGELPPSMIHKCPTCYKIFTENHALKKHLDWVH-GNKCHICKVCG--AKIKGNLQQHMET 1059
S P KC C + AL+ H +H ++ C C K NL +HM+
Sbjct: 5 SSGHP----EKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59
Query: 1060 HSGEK 1064
G+
Sbjct: 60 FHGDM 64
Score = 36.7 bits (86), Expect = 0.004
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 1183 PFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTSYKRHLKQH 1234
P C CS +SK L +H + + F+CN C ++ +H+K+
Sbjct: 9 PEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 36.7 bits (86), Expect = 0.004
Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRH 1698
P C C +K L H+++H P +C+ C ++L +H
Sbjct: 9 PEKCSECSYSCSSKAALRIHERIHCTDRP----FKCNYCSFDTKQPSNLSKH 56
Score = 36.7 bits (86), Expect = 0.004
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAMLKRHLVKH 236
+C+ CS + S+ L H H ++ C C+ D + L +H+ K
Sbjct: 8 HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 35.9 bits (84), Expect = 0.009
Identities = 16/97 (16%), Positives = 25/97 (25%), Gaps = 34/97 (35%)
Query: 598 THTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFIRNYMLRK 656
+ + KC C SS L+ H+ H + P KC C +
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIH---CTDRP----FKCNYCSFDTKQ------ 49
Query: 657 HLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKY 693
+L +HM G+
Sbjct: 50 --------------------PSNLSKHMKKFHGDMSG 66
Score = 35.2 bits (82), Expect = 0.013
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Query: 955 KCPKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKH 999
KC +C S+ +R H R + FKC+ C +L +H K
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 34.8 bits (81), Expect = 0.019
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 874 ECHYCGITKNNKTLLRDHISAHLGIKPYCCIFCEEKYFSKKS-LKRHEAKH 923
+C C + ++K LR H H +P+ C +C + S L +H K
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCS-FDTKQPSNLSKHMKKF 60
Score = 34.4 bits (80), Expect = 0.029
Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEK 212
C C +S ++ H ++ H + F+C +CS L H+ G+
Sbjct: 12 CSECSYSCSSKAALRIHERI-HCT---DRPFKCNYCSFDTKQPSNLSKHMKKFHGDM 64
Score = 34.0 bits (79), Expect = 0.037
Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 15/64 (23%)
Query: 1826 CDVCGKSFARTFHLKSHISSVHLKREQRKKHERKDHETQGLFSCDLCSYTSTQKYYLVKH 1885
C C S + L+ H +R H T F C+ CS+ + Q L KH
Sbjct: 12 CSECSYSCSSKAALRIH---------ERI------HCTDRPFKCNYCSFDTKQPSNLSKH 56
Query: 1886 KSRH 1889
+
Sbjct: 57 MKKF 60
Score = 33.2 bits (77), Expect = 0.065
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 9/63 (14%)
Query: 36 SHTGLKPYICHICKNSYVAAKGLKRHLKRHMQA-TGQLSVEDMYQCDICSKMFIEHHAMV 94
S + P C C SY + K L+ H + + ++C+ CS + +
Sbjct: 3 SGSSGHPEKCSEC--SYSCSS--KAALRIHERIHCT----DRPFKCNYCSFDTKQPSNLS 54
Query: 95 KHR 97
KH
Sbjct: 55 KHM 57
Score = 31.3 bits (72), Expect = 0.34
Identities = 7/26 (26%), Positives = 9/26 (34%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK 603
+CN C L HM G+
Sbjct: 39 KCNYCSFDTKQPSNLSKHMKKFHGDM 64
Score = 27.5 bits (62), Expect = 9.3
Identities = 13/49 (26%), Positives = 17/49 (34%)
Query: 1625 CKKCQLGFLSKNELNVHNIKQHDAQPHTCPVCKKIFVNKFNLTTHKKLH 1673
C +C SK L +H +P C C NL+ H K
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
transcription, metal-binding, DNA, protein, nucleus,
activator; 1.70A {Mus musculus} PDB: 2wbu_A
Length = 89
Score = 78.7 bits (195), Expect = 1e-17
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 1060 HSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYAC--EFCGSSFKDKSYLRIHIRKHN 1115
+ CGK L H+ THTGE+PY C + CG F L H RKH
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 1116 GERPFTCSECGQSFAARSAFSLHLKKH 1142
G RPF C +C ++F+ +LH+K+H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 76.8 bits (190), Expect = 4e-17
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 687 HTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC--EICGGTFKTKWYLGVHMRKHN 742
T CGK LK H+ THTGE+PY C + CG F L H RKH
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 743 GERPYMCSECGQSFAARSAFSLHLKKH 769
G RP+ C +C ++F+ +LH+K+H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 73.7 bits (182), Expect = 7e-16
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 441 HTGERPVCCHICGKKL--RGKLKDHMLTHTGERPFGC--EVCGSTYKYKYYLAVHMRKHT 496
T CGK LK H+ THTGE+P+ C + CG + L H RKHT
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 497 GERPYVCNYCGHSFAARPAFNLHLKRH 523
G RP+ C C +F+ LH+KRH
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 71.8 bits (177), Expect = 3e-15
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 1241 YPCTVCSKNLSSPYRLKTHMLIHANNRVFTC--EVCGKGFIQKRYLEEHKRVHTGYKPYA 1298
C K + LK H+ H + + C + CG F + L H R HTG++P+
Sbjct: 8 CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67
Query: 1299 CDLCSKQFTQKSTLNIHRKLHL 1320
C C + F++ L +H K H
Sbjct: 68 CQKCDRAFSRSDHLALHMKRHF 89
Score = 64.9 bits (159), Expect = 9e-13
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 1263 HANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDL--CSKQFTQKSTLNIHRKLHL 1320
CGK + + +L+ H R HTG KPY CD C +F + L H + H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 1321 NIKDFICDLCGAKF 1334
+ F C C F
Sbjct: 62 GHRPFQCQKCDRAF 75
Score = 58.3 bits (142), Expect = 2e-10
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 713 HTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS--ECGQSFAARSAFSLHLKKHA 770
T CG T+ +L H+R H GE+PY C CG FA + H +KH
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 771 GFKQTIECEYCHNTFT 786
G + +C+ C F+
Sbjct: 62 GHRP-FQCQKCDRAFS 76
Score = 56.0 bits (136), Expect = 1e-09
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 467 HTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNY--CGHSFAARPAFNLHLKRHT 524
T CG TY +L H+R HTGE+PY C++ CG FA H ++HT
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Score = 52.9 bits (128), Expect = 1e-08
Identities = 26/94 (27%), Positives = 34/94 (36%), Gaps = 8/94 (8%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFEC--FHCGAKFISRTHIAD 347
+ GCGK + HL H R H G K + C CG KF +
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRT-HTGEKP-----YHCDWDGCGWKFARSDELTR 55
Query: 348 HMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHL 381
H HTG + C C ++ + L H K H
Sbjct: 56 HYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF 89
Score = 52.1 bits (126), Expect = 3e-08
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 12/95 (12%)
Query: 1113 KHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIG---YTVFCKECNIGFYSST 1169
K + CG+++ S HLK H LR H G Y C F S
Sbjct: 1 KRTATHTCDYAGCGKTYTKSS----HLKAH-----LRTHTGEKPYHCDWDGCGWKFARSD 51
Query: 1170 HLHSHGIKVHGLPPFICEHCSKPFTSKGNLTVHVK 1204
L H K G PF C+ C + F+ +L +H+K
Sbjct: 52 ELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMK 86
Score = 48.3 bits (116), Expect = 5e-07
Identities = 24/81 (29%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 393 YKCDKCDKLFIEQSEMVQHRDWVHGDKCYLCKI--CGARV--KSNLKAHMRIHTGERPVC 448
C K + + S + H G+K Y C CG + L H R HTG RP
Sbjct: 8 CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67
Query: 449 CHICGKKLR--GKLKDHMLTH 467
C C + L HM H
Sbjct: 68 CQKCDRAFSRSDHLALHMKRH 88
Score = 46.8 bits (112), Expect = 2e-06
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 268 TCPLCKKTYQSAKGMRLHIREVHSKVRPHQCK--GCGKYFKSQRHLVQHERRVHLGVKKI 325
C KTY + ++ H+R H+ +P+ C GCG F L +H R H G +
Sbjct: 9 DYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRH-YRKHTGHRP- 65
Query: 326 KHSNFECFHCGAKFISRTHIADHMTSH 352
F+C C F H+A HM H
Sbjct: 66 ----FQCQKCDRAFSRSDHLALHMKRH 88
Score = 44.4 bits (106), Expect = 1e-05
Identities = 26/108 (24%), Positives = 39/108 (36%), Gaps = 30/108 (27%)
Query: 1011 IHKCPTCYKIFTENHALKKHLDWVHGNKCHICKV--CGAKI--KGNLQQHMETHSGEKKI 1066
C K +T++ LK HL G K + C CG K L +H
Sbjct: 7 TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK------- 59
Query: 1067 CCHICGKKLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKH 1114
HTG RP+ C+ C +F +L +H+++H
Sbjct: 60 -------------------HTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 42.9 bits (102), Expect = 4e-05
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 10/90 (11%)
Query: 571 KKRDQKIECNICGALFATKYTLQDHMNTHTGNK-YKCDV--CDNGYSSLKHLKRHKMKHL 627
+ + CG + L+ H+ THTG K Y CD C ++ L RH KH
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH- 60
Query: 628 QENGELPPSKIQKCPICHKIFIRNYMLRKH 657
G P +C C + F R+ L H
Sbjct: 61 --TGHRP----FQCQKCDRAFSRSDHLALH 84
Score = 40.2 bits (95), Expect = 4e-04
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 148 HDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAH--CSKTYLSRVGLEDHI 205
+T C CGK + +K H + H G +K + C C + L H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRT-HTG---EKPYHCDWDGCGWKFARSDELTRHY 57
Query: 206 NNHTGEKGHICEICNRDFYSDAMLKRHLVKHSR 238
HTG + C+ C+R F HL H +
Sbjct: 58 RKHTGHRPFQCQKCDRAF----SRSDHLALHMK 86
Score = 40.2 bits (95), Expect = 4e-04
Identities = 28/120 (23%), Positives = 32/120 (26%), Gaps = 38/120 (31%)
Query: 599 HTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKC--PICHKIFIRNYMLR 655
T C Y+ HLK H H GE P C C F R+
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTH---TGEKP----YHCDWDGCGWKFARS---- 50
Query: 656 KHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCCHICGKK-MR-GKLKEHMLTH 713
L H HTG R + C C + R L HM H
Sbjct: 51 ----------------------DELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 39.4 bits (93), Expect = 7e-04
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 9/84 (10%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHI--CKNSYVAAKGLKRHLKRHMQATGQLS 73
+ C Y+ S L HL +HTG KPY C C + + L RH ++H TG
Sbjct: 9 DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH---TG--- 62
Query: 74 VEDMYQCDICSKMFIEHHAMVKHR 97
+QC C + F + H
Sbjct: 63 -HRPFQCQKCDRAFSRSDHLALHM 85
Score = 39.0 bits (92), Expect = 0.001
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 14/83 (16%)
Query: 955 KCPKCEKEFSTPRYMRKHLR-----KKFKCDV--CGNGYTSVKHLKRHKIKHMKESGELP 1007
C K ++ +++ HLR K + CD CG + L RH KH +G P
Sbjct: 9 DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH---TGHRP 65
Query: 1008 PSMIHKCPTCYKIFTENHALKKH 1030
+C C + F+ + L H
Sbjct: 66 ----FQCQKCDRAFSRSDHLALH 84
Score = 37.9 bits (89), Expect = 0.002
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 582 CGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHL 627
CG FA L H HTG++ ++C CD +S HL H +H
Sbjct: 43 CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF 89
Score = 37.1 bits (87), Expect = 0.005
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 20 CAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHM 66
C +++ +L H HTG +P+ C C ++ + L H+KRH
Sbjct: 43 CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF 89
Score = 34.0 bits (79), Expect = 0.064
Identities = 21/89 (23%), Positives = 30/89 (33%), Gaps = 27/89 (30%)
Query: 1822 KNCQCDVCGKSFARTFHLKSHI---------------------SSVHLKREQRKKHERKD 1860
C CGK++ ++ HLK+H+ S L R RK
Sbjct: 6 HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK------ 59
Query: 1861 HETQGLFSCDLCSYTSTQKYYLVKHKSRH 1889
H F C C ++ +L H RH
Sbjct: 60 HTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 33.7 bits (78), Expect = 0.090
Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 33/117 (28%)
Query: 740 KHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFTFETGLMGVVTRDE 799
K + CG+++ S HL+ H G K C++
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEK-PYHCDW------------------- 40
Query: 800 WEILLRDKVRICPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECDKIFATREKLQRH 856
C +F + RH + H + F C++CD+ F+ + L H
Sbjct: 41 ------------DGCGWKFARSDELTRH-YRKHTGHRPFQCQKCDRAFSRSDHLALH 84
Score = 33.3 bits (77), Expect = 0.093
Identities = 31/140 (22%), Positives = 41/140 (29%), Gaps = 58/140 (41%)
Query: 181 KQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC--EICNRDFY-SDAMLKRHLVKHS 237
+ A C KTY L+ H+ HTGEK + C + C F SD L +H
Sbjct: 3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSD-----ELTRHY 57
Query: 238 RMIKETSEEFVETGSITREEWYKMVLQRVKTCPLCKKTYQSAKGMRLHIREVHSKVRPHQ 297
R H+ RP Q
Sbjct: 58 R--------------------------------------------------KHTGHRPFQ 67
Query: 298 CKGCGKYFKSQRHLVQHERR 317
C+ C + F HL H +R
Sbjct: 68 CQKCDRAFSRSDHLALHMKR 87
Score = 32.9 bits (76), Expect = 0.13
Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Query: 1616 RHIKEYTVFCKKCQLGFLSKNELNVHNIKQHDAQPHTC--PVCKKIFVNKFNLTTHKKLH 1673
+ +T C + + L H +P+ C C F LT H + H
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 1674 LPMNRNHQCDTCGKSFTGNNHLKRH 1698
R QC C ++F+ ++HL H
Sbjct: 61 TGH-RPFQCQKCDRAFSRSDHLALH 84
Score = 32.1 bits (74), Expect = 0.27
Identities = 22/88 (25%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Query: 1589 HETRGVFSCDLCSYTSTRKYYLVKHKSRHIKE--YTVFCKKCQLGFLSKNELNVHNIKQH 1646
C T T+ +L H H E Y C F +EL H K
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 1647 DAQPHTCPVCKKIFVNKFNLTTHKKLHL 1674
+P C C + F +L H K H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRHF 89
Score = 32.1 bits (74), Expect = 0.27
Identities = 21/116 (18%), Positives = 34/116 (29%), Gaps = 38/116 (32%)
Query: 895 HLGIKPYCCIFCEEKYFSKKS-LKRHEAKHNKVYNKAQYQDYQIQDLSMDQYRELVQSKE 953
C K ++K S LK H H + E
Sbjct: 2 RTATHTCDYAGCG-KTYTKSSHLKAHLRTH---------------------------TGE 33
Query: 954 R--KC--PKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKHM 1000
+ C C +F+ + +H R + F+C C ++ HL H +H
Sbjct: 34 KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF 89
Score = 30.2 bits (69), Expect = 1.3
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
Query: 1680 HQCDTCGKSFTGNNHLKRHIYSVHLKRDTK---FPCRL--CSQEFDTKEQRKKHERKDHE 1734
CGK++T ++HLK HL+ T + C C +F ++ +H RK H
Sbjct: 8 CDYAGCGKTYTKSSHLKA-----HLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK-HT 61
Query: 1735 TQGLFSCDLCSYTSTQKYYLVKHKSRH 1761
F C C ++ +L H RH
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 29.8 bits (68), Expect = 1.5
Identities = 23/88 (26%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Query: 1733 HETQGLFSCDLCSYTSTQKYYLVKHKSRHI--KDYNVFCKICQLGFLSKNELDVHNIKQH 1790
C T T+ +L H H K Y+ C F +EL H K
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 1791 DAQPHTCPVCKKIFVNKVTLAAHKKIHL 1818
+P C C + F LA H K H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRHF 89
Score = 29.4 bits (67), Expect = 2.2
Identities = 23/95 (24%), Positives = 33/95 (34%), Gaps = 11/95 (11%)
Query: 832 HIEIKTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHY--CGITKNNKTLLR 889
T C K + L+ H H G + P C + CG L
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLR-THTGEK---P---YHCDWDGCGWKFARSDELT 54
Query: 890 DHISAHLGIKPYCCIFCEEKYFSKKS-LKRHEAKH 923
H H G +P+ C C ++ FS+ L H +H
Sbjct: 55 RHYRKHTGHRPFQCQKC-DRAFSRSDHLALHMKRH 88
Score = 28.6 bits (65), Expect = 4.5
Identities = 8/31 (25%), Positives = 11/31 (35%)
Query: 494 KHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
K T CG ++ HL+ HT
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHT 31
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 79
Score = 78.0 bits (193), Expect = 2e-17
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 1060 HSGEKKICCHI--CGK--KLRGRLNEHM-LTHTGERPYACEF--CGSSFKDKSYLRIHIR 1112
SG + C CG+ R LN H H ++ ++C CG SF K +L+ H++
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 1113 KHNGERPFTCSECGQSF 1129
H+ R + C G S
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 77.6 bits (192), Expect = 2e-17
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 687 HTGERKYCCHI--CGK--KMRGKLKEHM-LTHTGERPYACE--ICGGTFKTKWYLGVHMR 739
+G C CG+ R L H H ++ ++C CG +F K +L HM+
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 740 KHNGERPYMCSECGQSF 756
H+ R Y+C G S
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 76.4 bits (189), Expect = 5e-17
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 441 HTGERPVCCHI--CGK--KLRGKLKDHM-LTHTGERPFGCE--VCGSTYKYKYYLAVHMR 493
+G + C CG+ R L H H ++ F C CG ++ +K +L HM+
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 494 KHTGERPYVCNYCGHSF 510
H+ R Y+C + G S
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 64.5 bits (158), Expect = 8e-13
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 1269 FTCEV--CGKGFIQKRYLEEHKRV-HTGYKPYACD--LCSKQFTQKSTLNIHRKLHLNIK 1323
C+ CG+ F ++YL HK+ H K ++C C K F K L H KLH + +
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 1324 DFICDLCGAKF 1334
D+IC+ G
Sbjct: 68 DYICEFSGPSS 78
Score = 61.8 bits (151), Expect = 6e-12
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 713 HTGERPYACEI--CGGTFKTKWYLGVHMR-KHNGERPYMCSE--CGQSFAARSAFSLHLK 767
+G C+ CG F + YL H + +H ++ + C E CG+SF + H+K
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 768 KHAGFKQTIECEYCHNTF 785
H+ + CE+ +
Sbjct: 62 LHSDTRD-YICEFSGPSS 78
Score = 59.1 bits (144), Expect = 6e-11
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 467 HTGERPFGCEV--CGSTYKYKYYLAVHMR-KHTGERPYVCNY--CGHSFAARPAFNLHLK 521
+G C+ CG + + YL H + +H ++ + C CG SF + H+K
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 522 RHT 524
H+
Sbjct: 62 LHS 64
Score = 59.1 bits (144), Expect = 6e-11
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 1241 YPCTV--CSKNLSSPYRLKTHMLI-HANNRVFTCE--VCGKGFIQKRYLEEHKRVHTGYK 1295
PC C + S+ L H H + + F+C CGK F K++L+EH ++H+ +
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 1296 PYACDLCSKQF 1306
Y C+
Sbjct: 68 DYICEFSGPSS 78
Score = 55.2 bits (134), Expect = 1e-09
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query: 393 YKCDK--CDKLFIEQSEMVQHRDWVH-GDKCYLCK--ICGAR--VKSNLKAHMRIHTGER 445
CD C ++F + + H+ + H K + C CG K +LK HM++H+ R
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 446 PVCCHICGK 454
C G
Sbjct: 68 DYICEFSGP 76
Score = 48.7 bits (117), Expect = 3e-07
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 290 HSKVRPHQCK--GCGKYFKSQRHLVQHERRVHLGVKKIKHSNFEC--FHCGAKFISRTHI 345
S C GCG+ F ++++L H++ H+ K F C CG F + H+
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS-----FSCPEPACGKSFNFKKHL 56
Query: 346 ADHMTSHTGIKNHVCSIC 363
+HM H+ ++++C
Sbjct: 57 KEHMKLHSDTRDYICEFS 74
Score = 47.5 bits (114), Expect = 8e-07
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 153 KCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAH--CSKTYLSRVGLEDHINNHTG 210
C CG+ F++ + + H+K H+ +K F C C K++ + L++H+ H+
Sbjct: 9 PCDFPGCGRIFSNRQYLNHHKKYQHIH---QKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65
Query: 211 EKGHICEICNRDF 223
+ +ICE
Sbjct: 66 TRDYICEFSGPSS 78
Score = 45.2 bits (108), Expect = 6e-06
Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 640 KCPICHKIFIRNYMLRKHLDFVH-GNKYHSCK--VCGA--EIKGSLKEHMIVHTGERKYC 694
P C +IF L H + H K SC CG K LKEHM +H+ R Y
Sbjct: 11 DFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI 70
Query: 695 CHICGK 700
C G
Sbjct: 71 CEFSGP 76
Score = 43.7 bits (104), Expect = 2e-05
Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 19/88 (21%)
Query: 1114 HNGERPFTCS--ECGQSFAARSAFSLHLKKHAGSHILRRHIG---YTVFCKE--CNIGFY 1166
+G C CG+ F+ R +L H +HI ++ C E C F
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQ----YLNH----HKKYQHIHQKSFS--CPEPACGKSFN 51
Query: 1167 SSTHLHSHGIKVH-GLPPFICEHCSKPF 1193
HL H +K+H +ICE
Sbjct: 52 FKKHLKEH-MKLHSDTRDYICEFSGPSS 78
Score = 41.4 bits (98), Expect = 1e-04
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 268 TCPLCKKTYQSAKGMRLHIREVHSKVRPHQCK--GCGKYFKSQRHLVQHERRVHLGVKKI 325
P C + + + + + H + H + C CGK F ++HL +H ++H +
Sbjct: 11 DFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH-MKLHSDTRD- 68
Query: 326 KHSNFECFHCGAKF 339
+ C G
Sbjct: 69 ----YICEFSGPSS 78
Score = 41.4 bits (98), Expect = 1e-04
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 1013 KCPTCYKIFTENHALKKHLDWVH-GNKCHICK--VCGA--KIKGNLQQHMETHSGEKKIC 1067
P C +IF+ L H + H K C CG K +L++HM+ HS +
Sbjct: 11 DFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI 70
Query: 1068 CHICGK 1073
C G
Sbjct: 71 CEFSGP 76
Score = 39.1 bits (92), Expect = 7e-04
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 6/63 (9%)
Query: 1291 HTGYKPYACDL--CSKQFTQKSTLNIH-RKLHLNIKDFICD--LCGAKFYEFNTYVTHVH 1345
+G CD C + F+ + LN H + H++ K F C CG F H+
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 1346 ETH 1348
H
Sbjct: 62 -LH 63
Score = 38.7 bits (91), Expect = 0.001
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 36/102 (35%)
Query: 1183 PFICEH--CSKPFTSKGNLTVHVKYYHA--KTLFECN--ICLKTFNFKTSYKRHLKQHDD 1236
C+ C + F+++ L H KY H K+ F C C K+FNFK
Sbjct: 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS-FSCPEPACGKSFNFKKH---------- 55
Query: 1237 SVTYYPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGF 1278
LK HM +H++ R + CE G
Sbjct: 56 -------------------LKEHMKLHSDTRDYICEFSGPSS 78
Score = 38.3 bits (90), Expect = 0.002
Identities = 20/118 (16%), Positives = 32/118 (27%), Gaps = 48/118 (40%)
Query: 495 HTGERPYVCNY--CGHSFAARPAFNLHLKRHTERGDVRHIECQHSLKIIEYKIYQWISIE 552
+G C++ CG F+ R N H K++ + C
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHH-KKYQHIHQ-KSFSCPEPA-------------- 45
Query: 553 NWFKIKRENVPSTKDQSHKKRDQKIECNICGALFATKYTLQDHMNTHTGNK-YKCDVC 609
CG F K L++HM H+ + Y C+
Sbjct: 46 -----------------------------CGKSFNFKKHLKEHMKLHSDTRDYICEFS 74
Score = 35.6 bits (83), Expect = 0.014
Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 10/75 (13%)
Query: 836 KTFSC--EECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHY--CGITKNNKTLLRDH 891
C C +IF+ R+ L H Y H + C CG + N K L++H
Sbjct: 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQK---S---FSCPEPACGKSFNFKKHLKEH 59
Query: 892 ISAHLGIKPYCCIFC 906
+ H + Y C F
Sbjct: 60 MKLHSDTRDYICEFS 74
Score = 35.2 bits (82), Expect = 0.019
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
Query: 126 KCPICGDRYKSGTDMRRHYRDLHDSTR--KCPCEVCGKRFNSIKRVKQHRKVVHMGIKQK 183
P CG + + + H + H + CP CGK FN K +K+H K +H
Sbjct: 11 DFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK-LHSD---T 66
Query: 184 KKFECAHCSKTY 195
+ + C +
Sbjct: 67 RDYICEFSGPSS 78
Score = 34.8 bits (81), Expect = 0.023
Identities = 19/75 (25%), Positives = 25/75 (33%), Gaps = 15/75 (20%)
Query: 955 KCPKCEKEFSTPRYMRKHLR------KKFKCD--VCGNGYTSVKHLKRHKIKHMKESGEL 1006
P C + FS +Y+ H + K F C CG + KHLK H H S
Sbjct: 11 DFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH---SDTR 67
Query: 1007 PPSMIHKCPTCYKIF 1021
+ C
Sbjct: 68 D----YICEFSGPSS 78
Score = 34.8 bits (81), Expect = 0.025
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 1619 KEYTVFCKKCQLGFLSKNELNVHNIKQHDAQ-PHTCP--VCKKIFVNKFNLTTHKKLHLP 1675
C F ++ LN H QH Q +CP C K F K +L H KLH
Sbjct: 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65
Query: 1676 MNRNHQCDTCGKSF 1689
R++ C+ G S
Sbjct: 66 -TRDYICEFSGPSS 78
Score = 32.9 bits (76), Expect = 0.10
Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 10/71 (14%)
Query: 20 CAMRYSSKSQLLDHL-NSHTGLKPYIC--HICKNSYVAAKGLKRHLKRHMQATGQLSVED 76
C +S++ L H H K + C C S+ K LK H+K H +
Sbjct: 15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH---SD----TR 67
Query: 77 MYQCDICSKMF 87
Y C+
Sbjct: 68 DYICEFSGPSS 78
Score = 31.8 bits (73), Expect = 0.29
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 1776 FLSKNELDVHNIKQHDAQ-PHTCP--VCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKS 1832
F ++ L+ H QH Q +CP C K F K L H K+H ++ C+ G S
Sbjct: 19 FSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD-TRDYICEFSGPS 77
Query: 1833 F 1833
Sbjct: 78 S 78
Score = 31.0 bits (71), Expect = 0.51
Identities = 20/110 (18%), Positives = 34/110 (30%), Gaps = 36/110 (32%)
Query: 741 HNGERPYMCS--ECGQSFAARSAFSLHLK-KHAGFKQTIECEYCHNTFTFETGLMGVVTR 797
+G C CG+ F+ R + H K +H K + C
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQK-SFSCPE----------------- 43
Query: 798 DEWEILLRDKVRICPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECDKIF 847
P C K F + ++ H+K +H + + + CE
Sbjct: 44 --------------PACGKSFNFKKHLKEHMK-LHSDTRDYICEFSGPSS 78
Score = 30.6 bits (70), Expect = 0.84
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEE--CDKIFATREKLQRHWNYIHQG 863
P C + F + + + H K HI K+FSC E C K F ++ L+ H +H
Sbjct: 12 FPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH-MKLHSD 65
Score = 28.7 bits (65), Expect = 3.9
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 1824 CQCDVCGKSFARTFHLKSHISSVH 1847
C CG+ F+ +L H H
Sbjct: 10 CDFPGCGRIFSNRQYLNHHKKYQH 33
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine
zipper, X-RAY crystallography, structure-based design,
zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1
g.37.1.1 PDB: 1xf7_A
Length = 88
Score = 77.5 bits (192), Expect = 3e-17
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Query: 419 KCYLCKICGA--RVKSNLKAHMRIHTGERPVCCHICGKKLR--GKLKDHMLTHTGERPFG 474
K + C+IC +L H+R HTGE+P C ICG+K + K H P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPIL 60
Query: 475 CEVCGSTYKYKYYLAVH---MRKHTGER 499
+ Y+L ++K GER
Sbjct: 61 EDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 75.6 bits (187), Expect = 1e-16
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 1068 CHICGKK--LRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSEC 1125
C IC + L H+ THTGE+P+AC+ CG F + H P +
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILEDKV 64
Query: 1126 GQSFAARSAFSLHLKKHAGSHILRRHIG 1153
+ + HL+ L++ +G
Sbjct: 65 EELLSKNY----HLENEVAR--LKKLVG 86
Score = 74.8 bits (185), Expect = 2e-16
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 1269 FTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICD 1328
F C +C + F + +L H R HTG KP+ACD+C ++F + HR + +I + D
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILED 62
Query: 1329 LCGAKF 1334
Sbjct: 63 KVEELL 68
Score = 74.5 bits (184), Expect = 3e-16
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 693 YCCHICGKK--MRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ C IC + L H+ THTGE+P+AC+ICG F H P +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILED 62
Query: 751 ECGQSFAARSAFSLHLKKHAGFKQT 775
+ + + HL+ +
Sbjct: 63 KVEELLSKNY----HLENEVARLKK 83
Score = 66.4 bits (163), Expect = 2e-13
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 8/88 (9%)
Query: 665 KYHSCKVCGAE--IKGSLKEHMIVHTGERKYCCHICGKK--MRGKLKEHMLTHTGERPYA 720
K C++C L H+ HTGE+ + C ICG+K + K H P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPIL 60
Query: 721 CEICGGTFKTKWYLGVH---MRKHNGER 745
+ ++L ++K GER
Sbjct: 61 EDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 66.4 bits (163), Expect = 2e-13
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Query: 445 RPVCCHICGKK--LRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYV 502
+P C IC + L H+ THTGE+PF C++CG + H P +
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPIL 60
Query: 503 CNYCGHSFAARPAFNLHLKRH 523
+ + N HL+
Sbjct: 61 EDKVEELLSK----NYHLENE 77
Score = 65.6 bits (161), Expect = 4e-13
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 1090 RPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILR 1149
+P+ C C +F +L HIR H GE+PF C CG+ FA K+H +
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSD----ERKRHRDIQHIL 57
Query: 1150 RHIGYTVFCKECNIGFYSSTHLHSH 1174
+ + + HL +
Sbjct: 58 PIL-----EDKVEELLSKNYHLENE 77
Score = 65.6 bits (161), Expect = 5e-13
Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 8/88 (9%)
Query: 1038 KCHICKVCGAK--IKGNLQQHMETHSGEKKICCHICGKKLR--GRLNEHMLTHTGERPYA 1093
K C++C +L H+ TH+GEK C ICG+K H P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPIL 60
Query: 1094 CEFCGSSFKDKSYLRIHI---RKHNGER 1118
+ +L + +K GER
Sbjct: 61 EDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 57.5 bits (140), Expect = 3e-10
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 717 RPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKH 769
+P+ C IC F +L H+R H GE+P+ C CG+ FA K+H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSD----ERKRH 50
Score = 56.7 bits (138), Expect = 5e-10
Identities = 25/115 (21%), Positives = 37/115 (32%), Gaps = 32/115 (27%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPS 636
+C IC F+ L H+ THTG K + CD+C ++ KRH+ LP
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ----HILP-- 58
Query: 637 KIQKCPICHKIFIRNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGER 691
++ +NY L + GER
Sbjct: 59 --ILEDKVEELLSKNYHLENE-----------------------VARLKKLVGER 88
Score = 56.4 bits (137), Expect = 8e-10
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 471 RPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHTER 526
+PF C +C + +L H+R HTGE+P+ C+ CG FA H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHIL 57
Score = 49.4 bits (119), Expect = 2e-07
Identities = 19/116 (16%), Positives = 35/116 (30%), Gaps = 33/116 (28%)
Query: 1183 PFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTSYKRHLKQHDDSVTYYP 1242
PF C C + F+ +LT H++ + + F C+IC + F
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDE---------------- 46
Query: 1243 CTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHK---RVHTGYK 1295
K H I + + + + +LE + G +
Sbjct: 47 -------------RKRHRDIQ-HILPILEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 48.6 bits (117), Expect = 4e-07
Identities = 21/115 (18%), Positives = 38/115 (33%), Gaps = 36/115 (31%)
Query: 955 KCPKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPS 1009
+C C + FS ++ H+R K F CD+CG + KRH+ LP
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ----HILP-- 58
Query: 1010 MIHKCPTCYKIFTENHALKKHLDWVHGNKCHICKVCGAKIKGNLQQHMETHSGEK 1064
++ ++N+ L+ ++ GE+
Sbjct: 59 --ILEDKVEELLSKNYHLENE-----------------------VARLKKLVGER 88
Score = 48.3 bits (116), Expect = 5e-07
Identities = 22/90 (24%), Positives = 31/90 (34%), Gaps = 8/90 (8%)
Query: 293 VRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSH 352
++P QC+ C + F HL H R H G K F C CG KF H
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTH-IRTHTGEKP-----FACDICGRKFARSDERKRHRDIQ 54
Query: 353 TGIKNHVCSICQSTYTTARGLKRHNKNHLR 382
I + + + L+ L+
Sbjct: 55 H-ILPILEDKVEELLSKNYHLENEVA-RLK 82
Score = 47.1 bits (113), Expect = 1e-06
Identities = 20/119 (16%), Positives = 30/119 (25%), Gaps = 39/119 (32%)
Query: 604 YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFIRNYMLRKHLDFVHG 663
++C +C +S HL H H GE P C IC + F R+
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTH---TGEKP----FACDICGRKFARS------------ 44
Query: 664 NKYHSCKVCGAEIKGSLKEHMIVHTGERKYCCHICGKKMR-----GKLKEHMLTHTGER 717
K H + + + + GER
Sbjct: 45 --------------DERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 47.1 bits (113), Expect = 1e-06
Identities = 24/121 (19%), Positives = 36/121 (29%), Gaps = 41/121 (33%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRA 389
F+C C F H+ H+ +HTG K
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKP-------------------------------- 31
Query: 390 DEMYKCDKCDKLFIEQSEMVQHRDWVHGDKCYLCKICGA--RVKSNLK---AHMRIHTGE 444
+ CD C + F E +HRD + L +L+ A ++ GE
Sbjct: 32 ---FACDICGRKFARSDERKRHRD-IQHILPILEDKVEELLSKNYHLENEVARLKKLVGE 87
Query: 445 R 445
R
Sbjct: 88 R 88
Score = 43.6 bits (104), Expect = 2e-05
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1295 KPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKF 1334
KP+ C +C + F++ L H + H K F CD+CG KF
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF 41
Score = 42.5 bits (101), Expect = 7e-05
Identities = 9/51 (17%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHIS 1844
P C +C + F H+ I D + ++ +HL++ ++
Sbjct: 31 PFACDICGRKFARSDERKRHRDIQH--ILPILEDKVEELLSKNYHLENEVA 79
Score = 42.1 bits (100), Expect = 7e-05
Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 8/82 (9%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVE 75
+C C +S L H+ +HTG KP+ C IC + + KRH
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH--------I 56
Query: 76 DMYQCDICSKMFIEHHAMVKHR 97
D ++ +++ +
Sbjct: 57 LPILEDKVEELLSKNYHLENEV 78
Score = 41.7 bits (99), Expect = 1e-04
Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 17/96 (17%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHISSVHLKREQR 1853
P C +C + F L H + H +K CD+CG+ FAR+ K H +
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGRKFARSDERKRH---------RD 52
Query: 1854 KKHERKDHETQGLFSCDLCSYTSTQKYYLVKHKSRH 1889
+H D ++ Y+L +R
Sbjct: 53 IQHILP-------ILEDKVEELLSKNYHLENEVARL 81
Score = 39.8 bits (94), Expect = 6e-04
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRH 1698
P C +C + F +LTTH + H P CD CG+ F ++ KRH
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKP----FACDICGRKFARSDERKRH 50
Score = 38.6 bits (91), Expect = 0.002
Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 6/83 (7%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHI 215
C +C + F+ + H + H G +K F C C + + + H + +
Sbjct: 6 CRICMRNFSRSDHLTTHIRT-HTG---EKPFACDICGRKFARSDERKRHRDIQH-ILPIL 60
Query: 216 CEICNRDFYSDAMLKRHLVKHSR 238
+ + L+ V +
Sbjct: 61 EDKVEELLSKNYHLENE-VARLK 82
Score = 36.7 bits (86), Expect = 0.008
Identities = 20/49 (40%), Positives = 24/49 (48%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAMLKRH 232
K F+C C + + L HI HTGEK C+IC R F KRH
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 50
Score = 34.0 bits (79), Expect = 0.056
Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 126 KCPICGDRYKSGTDMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKK 185
+C IC + + H R H + C++CG++F K+HR I+
Sbjct: 5 QCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRD-----IQHILP 58
Query: 186 FECAHCSKTYLSRVGLEDHINN---HTGEK 212
+ LE+ + GE+
Sbjct: 59 ILEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 33.2 bits (77), Expect = 0.11
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 12/86 (13%)
Query: 1680 HQCDTCGKSFTGNNHLKRHIYSVHLKR----DTKFPCRLCSQEFDTKEQRKKHERKDHET 1735
QC C ++F+ ++HL H R + F C +C ++F ++RK+H H
Sbjct: 4 FQCRICMRNFSRSDHLTTH------IRTHTGEKPFACDICGRKFARSDERKRHRDIQHIL 57
Query: 1736 QGLFSCDLCSYTSTQKYYLVKHKSRH 1761
D ++ Y+L +R
Sbjct: 58 P--ILEDKVEELLSKNYHLENEVARL 81
Score = 31.3 bits (72), Expect = 0.47
Identities = 22/90 (24%), Positives = 29/90 (32%), Gaps = 14/90 (15%)
Query: 835 IKTFSCEECDKIFATREKLQRHWNYIHQGIRNTG--PNQLLECHYCGITKNNKTLLRDHI 892
+K F C C + F+ + L H H TG P C CG + H
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIR-TH-----TGEKP---FACDICGRKFARSDERKRHR 51
Query: 893 SAHLGIKPYCCIFCEEKYFSKKS-LKRHEA 921
I P E+ SK L+ A
Sbjct: 52 DIQ-HILPILEDKV-EELLSKNYHLENEVA 79
Score = 30.9 bits (71), Expect = 0.68
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 40 LKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSKMFIEHHAMVKHR 97
+KP+ C IC ++ + L H++ H TG E + CDIC + F +HR
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTH---TG----EKPFACDICGRKFARSDERKRHR 51
Score = 29.8 bits (68), Expect = 1.8
Identities = 15/79 (18%), Positives = 25/79 (31%), Gaps = 5/79 (6%)
Query: 1595 FSCDLCSYTSTRKYYLVKHKSRHIKE--YTVFCKKCQLGFLSKNELNVHNIKQHDAQPHT 1652
F C +C +R +L H H E + C C F +E H P
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFA--CDICGRKFARSDERKRH-RDIQHILPIL 60
Query: 1653 CPVCKKIFVNKFNLTTHKK 1671
+++ ++L
Sbjct: 61 EDKVEELLSKNYHLENEVA 79
Score = 29.0 bits (66), Expect = 3.3
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 9/50 (18%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVHIEIKT----FSCEECDKIFATREKLQRH 856
C C + F + HL HI T F+C+ C + FA ++ +RH
Sbjct: 6 CRICMRNF----SRSDHLTT-HIRTHTGEKPFACDICGRKFARSDERKRH 50
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN
domain containing protein 16, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 76.3 bits (189), Expect = 5e-17
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 431 KSNLKAHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYL 488
+ R C CGK L H THTGE+P+ C+ CG + + +L
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 489 AVHMRKHTGERPY 501
H R HTG P
Sbjct: 63 IGHHRVHTGSGPS 75
Score = 74.4 bits (184), Expect = 3e-16
Identities = 25/66 (37%), Positives = 31/66 (46%)
Query: 1079 LNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLH 1138
R Y C+ CG SF S L H R H GE+P+ C ECG++F RS H
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65
Query: 1139 LKKHAG 1144
+ H G
Sbjct: 66 HRVHTG 71
Score = 71.7 bits (177), Expect = 3e-15
Identities = 25/70 (35%), Positives = 31/70 (44%)
Query: 704 GKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFS 763
G R Y C+ CG +F L H R H GE+PY C ECG++F RS
Sbjct: 4 GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63
Query: 764 LHLKKHAGFK 773
H + H G
Sbjct: 64 GHHRVHTGSG 73
Score = 70.5 bits (174), Expect = 5e-15
Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 677 KGSLKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACEICGGTFKTKWYL 734
GS R+Y C CGK L +H THTGE+PY C+ CG F + +L
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 735 GVHMRKHNGERPY 747
H R H G P
Sbjct: 63 IGHHRVHTGSGPS 75
Score = 69.8 bits (172), Expect = 1e-14
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 1050 KGNLQQHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYL 1107
G+ + ++ C CGK L++H THTGE+PY C+ CG +F +S+L
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 1108 RIHIRKHNGERPF 1120
H R H G P
Sbjct: 63 IGHHRVHTGSGPS 75
Score = 69.0 bits (170), Expect = 2e-14
Identities = 25/64 (39%), Positives = 32/64 (50%)
Query: 1256 LKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIH 1315
R + C+ CGK F L +H+R HTG KPY CD C K F Q+S L H
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65
Query: 1316 RKLH 1319
++H
Sbjct: 66 HRVH 69
Score = 65.9 bits (162), Expect = 2e-13
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 458 GKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFN 517
G R + C+ CG ++ + L+ H R HTGE+PY C+ CG +F R
Sbjct: 4 GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63
Query: 518 LHLKRHT 524
H + HT
Sbjct: 64 GHHRVHT 70
Score = 54.8 bits (133), Expect = 2e-09
Identities = 17/55 (30%), Positives = 23/55 (41%)
Query: 1280 QKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKF 1334
+ + Y CD C K F+ S L+ HR+ H K + CD CG F
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAF 56
Score = 52.1 bits (126), Expect = 2e-08
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 1241 YPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPY 1297
Y C C K+ S L H H + + C+ CGK FIQ+ +L H RVHTG P
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75
Score = 47.8 bits (115), Expect = 6e-07
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 14/74 (18%)
Query: 1104 KSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIG---YTVFCKE 1160
+ R + C ECG+SF+ S L KH R H G Y C E
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSS----DLSKHR-----RTHTGEKPYK--CDE 51
Query: 1161 CNIGFYSSTHLHSH 1174
C F +HL H
Sbjct: 52 CGKAFIQRSHLIGH 65
Score = 46.3 bits (111), Expect = 2e-06
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADH 348
+ R ++C CGK F L +H RR H G K ++C CG FI R+H+ H
Sbjct: 12 QQRERRRYKCDECGKSFSHSSDLSKH-RRTHTGEKP-----YKCDECGKAFIQRSHLIGH 65
Query: 349 MTSHTGIK 356
HTG
Sbjct: 66 HRVHTGSG 73
Score = 39.7 bits (94), Expect = 4e-04
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
+C+ CG F+ L H THTG K YKCD C + HL H H
Sbjct: 20 KCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69
Score = 39.7 bits (94), Expect = 5e-04
Identities = 24/104 (23%), Positives = 29/104 (27%), Gaps = 35/104 (33%)
Query: 618 HLKRHKMKHLQENGELPPSKIQKCPICHKIFIRNYMLRKHLDFVHGNKYHSCKVCGAEIK 677
R + + KC C K F +
Sbjct: 5 SSGRSEWQQ---RERRR----YKCDECGKSFSHS-------------------------- 31
Query: 678 GSLKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPY 719
L +H HTGE+ Y C CGK R L H HTG P
Sbjct: 32 SDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75
Score = 36.7 bits (86), Expect = 0.006
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRH 1698
+ C C K F + +L+ H++ H P ++CD CGK+F +HL H
Sbjct: 18 RYKCDECGKSFSHSSDLSKHRRTHTGEKP----YKCDECGKAFIQRSHLIGH 65
Score = 35.9 bits (84), Expect = 0.009
Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 33/106 (31%)
Query: 341 SRTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRADEMYKCDKCDK 400
S + + C C +++ + L +H + H E + YKCD+C K
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE-------KPYKCDECGK 54
Query: 401 LFIEQSEMVQHRDWVHGDKCYLCKICGARVKSNLKAHMRIHTGERP 446
FI+ +S+L H R+HTG P
Sbjct: 55 AFIQ--------------------------RSHLIGHHRVHTGSGP 74
Score = 35.9 bits (84), Expect = 0.009
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ C C K F + L+ H++ H +K +CD CGK+F + HL H
Sbjct: 18 RYKCDECGKSFSHSSDLSKHRRTHTG-EKPYKCDECGKAFIQRSHLIGH 65
Score = 34.7 bits (81), Expect = 0.022
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 26 SKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSK 85
S + Y C C S+ + L +H + H TG E Y+CD C K
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH---TG----EKPYKCDECGK 54
Query: 86 MFIEHHAMVKH 96
FI+ ++ H
Sbjct: 55 AFIQRSHLIGH 65
Score = 34.3 bits (80), Expect = 0.038
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 269 CPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
C C K++ + + H R H+ +P++C CGK F + HL+ H RVH G
Sbjct: 21 CDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIGH-HRVHTGSG 73
Score = 33.6 bits (78), Expect = 0.072
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEK 212
C+ CGK F+ + +HR+ H G +K ++C C K ++ R L H HTG
Sbjct: 21 CDECGKSFSHSSDLSKHRR-THTG---EKPYKCDECGKAFIQRSHLIGHHRVHTGSG 73
Score = 31.3 bits (72), Expect = 0.44
Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
Query: 1167 SSTHLHSHGIKVH-GLPPFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKT 1225
SS + C+ C K F+ +L+ H + + + ++C+ C K F
Sbjct: 2 SSGSSGRSE-WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAF---- 56
Query: 1226 SYKRHLKQH 1234
+ HL H
Sbjct: 57 IQRSHLIGH 65
Score = 30.9 bits (71), Expect = 0.50
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 955 KCPKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELP 1007
KC +C K FS + KH R K +KCD CG + HL H H +G P
Sbjct: 20 KCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH---TGSGP 74
Score = 30.5 bits (70), Expect = 0.83
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHIC 48
+C C +S S L H +HTG KPY C C
Sbjct: 20 KCDECGKSFSHSSDLSKHRRTHTGEKPYKCDEC 52
Score = 30.1 bits (69), Expect = 1.3
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query: 975 KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPSMIHKCPTCYKIFTENHALKKH 1030
+++KCD CG ++ L +H+ H +GE P +KC C K F + L H
Sbjct: 17 RRYKCDECGKSFSHSSDLSKHRRTH---TGEKP----YKCDECGKAFIQRSHLIGH 65
Score = 29.7 bits (68), Expect = 1.7
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAMLKRHLVKHSR 238
++++C C K++ L H HTGEK + C+ C + F + HL+ H R
Sbjct: 17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQ----RSHLIGHHR 67
Score = 27.4 bits (62), Expect = 9.3
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 874 ECHYCGITKNNKTLLRDHISAHLGIKPYCCIFCEEKYFSKKS-LKRHEAKH 923
+C CG + ++ + L H H G KPY C C K F ++S L H H
Sbjct: 20 KCDECGKSFSHSSDLSKHRRTHTGEKPYKCDEC-GKAFIQRSHLIGHHRVH 69
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
transcription factor, kruppel-like factor, GC-box
promoter elements, structural genomics; NMR {Homo
sapiens}
Length = 100
Score = 76.5 bits (189), Expect = 1e-16
Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 431 KSNLKAHMRIHTGERPVCCHICGKKLRGKLKDHMLTHTGERPFGC--EVCGSTYKYKYYL 488
RIH + P C + K LK H+ THTGE+P+ C E C + L
Sbjct: 6 SGPDLEKRRIHYCDYPGCTKVYTK--SSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDEL 63
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
H RKHTG +P+ C C SF+ LH+KRH
Sbjct: 64 TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 75.0 bits (185), Expect = 3e-16
Identities = 33/99 (33%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 1050 KGNLQQHMETHSGEKKICCHICGKKLRGRLNEHMLTHTGERPYAC--EFCGSSFKDKSYL 1107
G + H + C + K L H+ THTGE+PY C E C F L
Sbjct: 6 SGPDLEKRRIHYCDYPGCTKVYTK--SSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDEL 63
Query: 1108 RIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSH 1146
H RKH G +PF C C +SF+ HL H H
Sbjct: 64 TRHYRKHTGAKPFQCGVCNRSFSRSD----HLALHMKRH 98
Score = 72.7 bits (179), Expect = 2e-15
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 677 KGSLKEHMIVHTGERKYCCHICGKKMRGKLKEHMLTHTGERPYAC--EICGGTFKTKWYL 734
G E +H + C + K LK H+ THTGE+PY C E C F L
Sbjct: 6 SGPDLEKRRIHYCDYPGCTKVYTK--SSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDEL 63
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKH 769
H RKH G +P+ C C +SF+ +LH+K+H
Sbjct: 64 TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 68.8 bits (169), Expect = 4e-14
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Query: 1220 TFNFKTSYKRHLKQHDDSVTYYPCTVCSKNLSSPYRLKTHMLIHANNRVFTC--EVCGKG 1277
+ + H C+K + LK H+ H + + C E C
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG-----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWR 56
Query: 1278 FIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLN 1321
F + L H R HTG KP+ C +C++ F++ L +H K H N
Sbjct: 57 FARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100
Score = 65.3 bits (160), Expect = 8e-13
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 32/111 (28%)
Query: 392 MYKCDK--CDKLFIEQSEMVQHRDWVHGDKCYLCKICGARVKSNLKAHMRIHTGERPVCC 449
++ CD C K++ + S+LKAH+R HTGE+P C
Sbjct: 15 IHYCDYPGCTKVYTK--------------------------SSHLKAHLRTHTGEKPYKC 48
Query: 450 HI--CGKKLR--GKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHT 496
C + +L H HTG +PF C VC ++ +LA+HM++H
Sbjct: 49 TWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 64.6 bits (158), Expect = 1e-12
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 1267 RVFTCEV--CGKGFIQKRYLEEHKRVHTGYKPYACDL--CSKQFTQKSTLNIHRKLHLNI 1322
R+ C+ C K + + +L+ H R HTG KPY C C +F + L H + H
Sbjct: 14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73
Query: 1323 KDFICDLCGAKF 1334
K F C +C F
Sbjct: 74 KPFQCGVCNRSF 85
Score = 60.3 bits (147), Expect = 5e-11
Identities = 32/131 (24%), Positives = 48/131 (36%), Gaps = 42/131 (32%)
Query: 1076 RGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS--ECGQSFAARS 1133
G E H + P C + S+L+ H+R H GE+P+ C+ C FA RS
Sbjct: 6 SGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA-RS 60
Query: 1134 AFSLHLKKHAGSHILRRHIGYTVFCKECNIGFYSSTHLHSHGIKVHGLPPFICEHCSKPF 1193
L +H R+H G PF C C++ F
Sbjct: 61 D---ELTRH-----YRKHTGAK---------------------------PFQCGVCNRSF 85
Query: 1194 TSKGNLTVHVK 1204
+ +L +H+K
Sbjct: 86 SRSDHLALHMK 96
Score = 53.8 bits (130), Expect = 9e-09
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 703 RGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS--ECGQSFAARS 760
G E H + P C + +L H+R H GE+PY C+ C FA
Sbjct: 6 SGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSD 61
Query: 761 AFSLHLKKHAGFKQTIECEYCHNTFT 786
+ H +KH G K +C C+ +F+
Sbjct: 62 ELTRHYRKHTGAKP-FQCGVCNRSFS 86
Score = 48.0 bits (115), Expect = 8e-07
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 10/95 (10%)
Query: 290 HSKVRPHQCK--GCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFH--CGAKFISRTHI 345
K R H C GC K + HL H R H G K ++C C +F +
Sbjct: 10 LEKRRIHYCDYPGCTKVYTKSSHLKAH-LRTHTGEKP-----YKCTWEGCDWRFARSDEL 63
Query: 346 ADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNH 380
H HTG K C +C +++ + L H K H
Sbjct: 64 TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 47.6 bits (114), Expect = 1e-06
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 264 QRVKTC--PLCKKTYQSAKGMRLHIREVHSKVRPHQC--KGCGKYFKSQRHLVQHERRVH 319
+R+ C P C K Y + ++ H+R H+ +P++C +GC F L +H R H
Sbjct: 13 RRIHYCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRH-YRKH 70
Query: 320 LGVKKIKHSNFECFHCGAKFISRTHIADHMTSHT 353
G K F+C C F H+A HM H
Sbjct: 71 TGAKP-----FQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 47.2 bits (113), Expect = 2e-06
Identities = 28/133 (21%), Positives = 37/133 (27%), Gaps = 40/133 (30%)
Query: 586 FATKYTLQDHMNTHTGNKYKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKC--PI 643
+ + H + C Y+ HLK H H GE P KC
Sbjct: 3 SGSSGPDLEKRRIHYCDY---PGCTKVYTKSSHLKAHLRTH---TGEKP----YKCTWEG 52
Query: 644 CHKIFIRNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCCHICGKK-M 702
C F R+ L H HTG + + C +C +
Sbjct: 53 CDWRFARS--------------------------DELTRHYRKHTGAKPFQCGVCNRSFS 86
Query: 703 R-GKLKEHMLTHT 714
R L HM H
Sbjct: 87 RSDHLALHMKRHQ 99
Score = 45.3 bits (108), Expect = 7e-06
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 564 STKDQSHKKRDQKIECNICGALFATKYTLQDHMNTHTGNK-YKC--DVCDNGYSSLKHLK 620
S+ K+R + C ++ L+ H+ THTG K YKC + CD ++ L
Sbjct: 5 SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELT 64
Query: 621 RHKMKHLQENGELPPSKIQKCPICHKIFIRNYMLRKHL 658
RH KH G P +C +C++ F R+ L H+
Sbjct: 65 RHYRKH---TGAKP----FQCGVCNRSFSRSDHLALHM 95
Score = 44.5 bits (106), Expect = 1e-05
Identities = 28/146 (19%), Positives = 40/146 (27%), Gaps = 54/146 (36%)
Query: 457 RGKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNY--CGHSFAARP 514
G + H + P C Y +L H+R HTGE+PY C + C FA
Sbjct: 6 SGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSD 61
Query: 515 AFNLHLKRHTERGDVRHIECQHSLKIIEYKIYQWISIENWFKIKRENVPSTKDQSHKKRD 574
H ++HT
Sbjct: 62 ELTRHYRKHT------------------------------------------------GA 73
Query: 575 QKIECNICGALFATKYTLQDHMNTHT 600
+ +C +C F+ L HM H
Sbjct: 74 KPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 41.8 bits (99), Expect = 1e-04
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 6 NKEKVRQLNVECHHCAMRYSSKSQLLDHLNSHTGLKPYICHI--CKNSYVAAKGLKRHLK 63
+ EK R + C Y+ S L HL +HTG KPY C C + + L RH +
Sbjct: 9 DLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR 68
Query: 64 RHMQATGQLSVEDMYQCDICSKMF 87
+H TG +QC +C++ F
Sbjct: 69 KH---TG----AKPFQCGVCNRSF 85
Score = 39.9 bits (94), Expect = 6e-04
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 582 CGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
C FA L H HTG K ++C VC+ +S HL H +H
Sbjct: 53 CDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 39.5 bits (93), Expect = 9e-04
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 956 CPKCEKEFSTPRYMRKHLR-----KKFKC--DVCGNGYTSVKHLKRHKIKHMKESGELPP 1008
P C K ++ +++ HLR K +KC + C + L RH KH +G P
Sbjct: 20 YPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH---TGAKP- 75
Query: 1009 SMIHKCPTCYKIFTENHALKKHL 1031
+C C + F+ + L H+
Sbjct: 76 ---FQCGVCNRSFSRSDHLALHM 95
Score = 39.5 bits (93), Expect = 0.001
Identities = 24/93 (25%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 148 HDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAH--CSKTYLSRVGLEDHI 205
C C K + +K H + H G +K ++C C + L H
Sbjct: 12 KRRIHYCDYPGCTKVYTKSSHLKAHLRT-HTG---EKPYKCTWEGCDWRFARSDELTRHY 67
Query: 206 NNHTGEKGHICEICNRDFYSDAMLKRHLVKHSR 238
HTG K C +CNR F HL H +
Sbjct: 68 RKHTGAKPFQCGVCNRSF----SRSDHLALHMK 96
Score = 38.0 bits (89), Expect = 0.003
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 20 CAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
C R++ +L H HTG KP+ C +C S+ + L H+KRH
Sbjct: 53 CDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 37.6 bits (88), Expect = 0.004
Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 16/110 (14%)
Query: 1128 SFAARSAFSLHLKKHAGSHILRRHIGYTVFCKECNIGFYSSTHLHSHGIKVH-GLPPFIC 1186
S + + H + C + S+HL +H ++ H G P+ C
Sbjct: 2 SSGSSGPDLEKRRIHYCDY------------PGCTKVYTKSSHLKAH-LRTHTGEKPYKC 48
Query: 1187 --EHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTSYKRHLKQH 1234
E C F LT H + + F+C +C ++F+ H+K+H
Sbjct: 49 TWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 34.9 bits (81), Expect = 0.043
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 1794 PHTC--PVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHI 1843
P+ C C F L H + H K QC VC +SF+R+ HL H+
Sbjct: 45 PYKCTWEGCDWRFARSDELTRHYRKHTG-AKPFQCGVCNRSFSRSDHLALHM 95
Score = 34.1 bits (79), Expect = 0.066
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 1650 PHTC--PVCKKIFVNKFNLTTHKKLHLPMNRNHQCDTCGKSFTGNNHLKRHI 1699
P+ C C F LT H + H + QC C +SF+ ++HL H+
Sbjct: 45 PYKCTWEGCDWRFARSDELTRHYRKHTGA-KPFQCGVCNRSFSRSDHLALHM 95
Score = 34.1 bits (79), Expect = 0.074
Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 32/107 (29%)
Query: 1804 FVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHI-------------------- 1843
+ ++IH C C K + ++ HLK+H+
Sbjct: 3 SGSSGPDLEKRRIH-----YCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 1844 -SSVHLKREQRKKHERKDHETQGLFSCDLCSYTSTQKYYLVKHKSRH 1889
S L R RK H F C +C+ + ++ +L H RH
Sbjct: 58 ARSDELTRHYRK------HTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 34.1 bits (79), Expect = 0.077
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 1678 RNHQCD--TCGKSFTGNNHLKRHIYSVHLKRDT---KFPCRL--CSQEFDTKEQRKKHER 1730
R H CD C K +T ++HLK HL+ T + C C F ++ +H R
Sbjct: 14 RIHYCDYPGCTKVYTKSSHLKA-----HLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR 68
Query: 1731 KDHETQGLFSCDLCSYTSTQKYYLVKHKSRH 1761
K H F C +C+ + ++ +L H RH
Sbjct: 69 K-HTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 33.8 bits (78), Expect = 0.085
Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 334 HCGAKFISRTHIADHMTSHTGIKNHVCSI--CQSTYTTARGLKRHNKNHLREAGVLRADE 391
C + +H+ H+ +HTG K + C+ C + + L RH + H +
Sbjct: 22 GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA-------K 74
Query: 392 MYKCDKCDKLFIEQSEMVQHR 412
++C C++ F + H
Sbjct: 75 PFQCGVCNRSFSRSDHLALHM 95
Score = 30.7 bits (70), Expect = 1.2
Identities = 24/131 (18%), Positives = 39/131 (29%), Gaps = 37/131 (28%)
Query: 726 GTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTF 785
G+ + R H + P C + + S HL+ H G K +C +
Sbjct: 1 GSSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEK-PYKCTW----- 50
Query: 786 TFETGLMGVVTRDEWEILLRDKVRICPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECDK 845
C+ F + RH + H K F C C++
Sbjct: 51 --------------------------EGCDWRFARSDELTRH-YRKHTGAKPFQCGVCNR 83
Query: 846 IFATREKLQRH 856
F+ + L H
Sbjct: 84 SFSRSDHLALH 94
Score = 29.5 bits (67), Expect = 2.6
Identities = 27/103 (26%), Positives = 37/103 (35%), Gaps = 11/103 (10%)
Query: 1575 FGTKKQRKKHERKDHETRGVFSCDL--CSYTSTRKYYLVKHKSRHIKE--YTVFCKKCQL 1630
G+ + R CD C+ T+ +L H H E Y + C
Sbjct: 3 SGSSGPDLEKRRI-------HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDW 55
Query: 1631 GFLSKNELNVHNIKQHDAQPHTCPVCKKIFVNKFNLTTHKKLH 1673
F +EL H K A+P C VC + F +L H K H
Sbjct: 56 RFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 28.4 bits (64), Expect = 8.0
Identities = 23/95 (24%), Positives = 33/95 (34%), Gaps = 11/95 (11%)
Query: 832 HIEIKTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHY--CGITKNNKTLLR 889
I C K++ L+ H H G + P +C + C L
Sbjct: 12 KRRIHYCDYPGCTKVYTKSSHLKAHLR-THTGEK---P---YKCTWEGCDWRFARSDELT 64
Query: 890 DHISAHLGIKPYCCIFCEEKYFSKKS-LKRHEAKH 923
H H G KP+ C C + FS+ L H +H
Sbjct: 65 RHYRKHTGAKPFQCGVC-NRSFSRSDHLALHMKRH 98
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 78
Score = 74.0 bits (182), Expect = 3e-16
Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 3/76 (3%)
Query: 713 HTGERPYACEICGGTFKTKWYLGVHMRKH---NGERPYMCSECGQSFAARSAFSLHLKKH 769
+G CEICG T + K L H RKH + C CG+ F + + H K
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 770 AGFKQTIECEYCHNTF 785
E +
Sbjct: 62 HPALLLAPQESSGPSS 77
Score = 73.2 bits (180), Expect = 8e-16
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Query: 1086 HTGERPYACEFCGSSFKDKSYLRIHIRKH---NGERPFTCSECGQSFAARSAFSLHLKKH 1142
+G CE CG + + K+ L H RKH F C CG+ F + + H K
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 1143 AG 1144
Sbjct: 62 HP 63
Score = 71.3 bits (175), Expect = 3e-15
Identities = 18/71 (25%), Positives = 23/71 (32%), Gaps = 5/71 (7%)
Query: 687 HTGERKYCCHICGKKMRGK--LKEHMLTHT---GERPYACEICGGTFKTKWYLGVHMRKH 741
+G C ICG R K L H H + CE CG F+ + H K
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 742 NGERPYMCSEC 752
+ E
Sbjct: 62 HPALLLAPQES 72
Score = 69.7 bits (171), Expect = 1e-14
Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 5/71 (7%)
Query: 1060 HSGEKKICCHICGK--KLRGRLNEHMLTHT---GERPYACEFCGSSFKDKSYLRIHIRKH 1114
SG + C ICG + + LN H H + CEFCG F+ + H K
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 1115 NGERPFTCSEC 1125
+ E
Sbjct: 62 HPALLLAPQES 72
Score = 69.0 bits (169), Expect = 2e-14
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 467 HTGERPFGCEVCGSTYKYKYYLAVHMRKHT---GERPYVCNYCGHSFAARPAFNLHLKRH 523
+G CE+CG T + K L H RKH + C +CG F + H +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 68.6 bits (168), Expect = 3e-14
Identities = 18/69 (26%), Positives = 23/69 (33%), Gaps = 5/69 (7%)
Query: 441 HTGERPVCCHICGKKLRGK--LKDHMLTHT---GERPFGCEVCGSTYKYKYYLAVHMRKH 495
+G + C ICG R K L H H F CE CG ++ +A H K
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 496 TGERPYVCN 504
Sbjct: 62 HPALLLAPQ 70
Score = 58.2 bits (141), Expect = 2e-10
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 1291 HTGYKPYACDLCSKQFTQKSTLNIHRKLHLNI---KDFICDLCGAKFYEFNTYVTHVHET 1347
+G C++C QK++LN H++ H F C+ CG +F + ++ H ++
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 1348 H 1348
H
Sbjct: 62 H 62
Score = 57.8 bits (140), Expect = 2e-10
Identities = 16/67 (23%), Positives = 20/67 (29%), Gaps = 3/67 (4%)
Query: 1241 YPCTVCSKNLSSPYRLKTHMLIHANN---RVFTCEVCGKGFIQKRYLEEHKRVHTGYKPY 1297
C +C L H HA F CE CGK F + + H+
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 1298 ACDLCSK 1304
A S
Sbjct: 68 APQESSG 74
Score = 51.6 bits (124), Expect = 3e-08
Identities = 15/69 (21%), Positives = 20/69 (28%), Gaps = 3/69 (4%)
Query: 1183 PFICEHCSKPFTSKGNLTVHVK---YYHAKTLFECNICLKTFNFKTSYKRHLKQHDDSVT 1239
CE C K +L H + A F C C K F S H + ++
Sbjct: 7 GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66
Query: 1240 YYPCTVCSK 1248
P
Sbjct: 67 LAPQESSGP 75
Score = 50.9 bits (122), Expect = 5e-08
Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 7/71 (9%)
Query: 663 GNKYHSCKVCGAE--IKGSLKEHMIVHT---GERKYCCHICGKKMRGK--LKEHMLTHTG 715
G+ C++CG K SL H H ++ C CGK+ + H
Sbjct: 4 GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP 63
Query: 716 ERPYACEICGG 726
A + G
Sbjct: 64 ALLLAPQESSG 74
Score = 50.9 bits (122), Expect = 5e-08
Identities = 17/106 (16%), Positives = 27/106 (25%), Gaps = 33/106 (31%)
Query: 1114 HNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIGYTVFCKECNIGFYSSTHLHS 1173
+G C CG + +++ + H +KHA +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETV--------------------------- 34
Query: 1174 HGIKVHGLPPFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLK 1219
F CE C K F ++ H H L
Sbjct: 35 ------AALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74
Score = 50.1 bits (120), Expect = 1e-07
Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIH--LPIDKNCQCDVCGKSFARTFHLKSHISSVH 1847
C +C K +L H++ H C+ CGK F + + +H S H
Sbjct: 7 GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62
Score = 49.7 bits (119), Expect = 2e-07
Identities = 13/56 (23%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLHLPMN--RNHQCDTCGKSFTGNNHLKRHIYSVH 1703
C +C K +L H++ H C+ CGK F + + H H
Sbjct: 7 GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62
Score = 48.9 bits (117), Expect = 2e-07
Identities = 13/64 (20%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK----YKCDVCDNGYSSLKHLKRHKMKHLQENGEL 633
+C ICG K +L H H + C+ C + + H+ K
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA 68
Query: 634 PPSK 637
P
Sbjct: 69 PQES 72
Score = 47.8 bits (114), Expect = 7e-07
Identities = 10/71 (14%), Positives = 22/71 (30%), Gaps = 5/71 (7%)
Query: 393 YKCDKCDKLFIEQSEMVQHR---DWVHGDKCYLCKICGAR--VKSNLKAHMRIHTGERPV 447
+C+ C +++ + H+ + C+ CG R ++ AH +
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 448 CCHICGKKLRG 458
G
Sbjct: 68 APQESSGPSSG 78
Score = 47.0 bits (112), Expect = 1e-06
Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 4/77 (5%)
Query: 975 KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPSMIHKCPTCYKIFTENHALKKHLDWV 1034
+C++CG L H+ KH + L C C K F + ++ H
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALR----FPCEFCGKRFEKPDSVAAHRSKS 61
Query: 1035 HGNKCHICKVCGAKIKG 1051
H + G
Sbjct: 62 HPALLLAPQESSGPSSG 78
Score = 46.2 bits (110), Expect = 2e-06
Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 5/81 (6%)
Query: 599 HTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFIRNYMLRKH 657
+G+ +C++C L H+ KH + L C C K F + + H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALR----FPCEFCGKRFEKPDSVAAH 57
Query: 658 LDFVHGNKYHSCKVCGAEIKG 678
H + + G
Sbjct: 58 RSKSHPALLLAPQESSGPSSG 78
Score = 43.5 bits (103), Expect = 2e-05
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 37 HTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSKMFIEHHAMVKH 96
+G C IC + L H ++H + + C+ C K F + ++ H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVA----ALRFPCEFCGKRFEKPDSVAAH 57
Query: 97 R 97
R
Sbjct: 58 R 58
Score = 43.5 bits (103), Expect = 2e-05
Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 12/65 (18%)
Query: 1825 QCDVCGKSFARTFHLKSHISSVHLKREQRKKHERKDHETQGLFSCDLCSYTSTQKYYLVK 1884
QC++CG + + L H ++KH + F C+ C + +
Sbjct: 9 QCEICGFTCRQKASLNWH----------QRKHAETVAALR--FPCEFCGKRFEKPDSVAA 56
Query: 1885 HKSRH 1889
H+S+
Sbjct: 57 HRSKS 61
Score = 43.2 bits (102), Expect = 3e-05
Identities = 13/66 (19%), Positives = 19/66 (28%), Gaps = 3/66 (4%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHT---GEKGHICEICNRDFYSDAMLKRHLVKHSRMI 240
+C C T + L H H CE C + F + H K +
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Query: 241 KETSEE 246
+E
Sbjct: 66 LLAPQE 71
Score = 42.8 bits (101), Expect = 3e-05
Identities = 16/71 (22%), Positives = 23/71 (32%), Gaps = 3/71 (4%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHM 349
S QC+ CG + + L H +R H F C CG +F +A H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWH-QRKHAETVAAL--RFPCEFCGKRFEKPDSVAAHR 58
Query: 350 TSHTGIKNHVC 360
+
Sbjct: 59 SKSHPALLLAP 69
Score = 42.4 bits (100), Expect = 6e-05
Identities = 17/96 (17%), Positives = 26/96 (27%), Gaps = 22/96 (22%)
Query: 208 HTGEKGHICEICNRDFYSDAMLKRHLVKHSRMIKETSEEFVETGSITREEWYKMVLQRVK 267
+G G CEIC A L H KH+ +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAA----------------------LRF 39
Query: 268 TCPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGK 303
C C K ++ + H + H + + G
Sbjct: 40 PCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGP 75
Score = 42.0 bits (99), Expect = 7e-05
Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHI 215
CE+CG + H++ H +F C C K + + H +
Sbjct: 10 CEICGFTCRQKASLNWHQRK-HAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA 68
Query: 216 CE 217
+
Sbjct: 69 PQ 70
Score = 42.0 bits (99), Expect = 8e-05
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 495 HTGERPYVCNYCGHSFAARPAFNLHLKRHTERGDVRHIECQH 536
+G C CG + + + N H ++H E C+
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEF 43
Score = 41.6 bits (98), Expect = 1e-04
Identities = 16/68 (23%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 1680 HQCDTCGKSFTGNNHLKRHIYSVH--LKRDTKFPCRLCSQEFDTKEQRKKHERKDHETQG 1737
QC+ CG + L H H +FPC C + F+ + H K H
Sbjct: 8 LQCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66
Query: 1738 LFSCDLCS 1745
L +
Sbjct: 67 LAPQESSG 74
Score = 40.1 bits (94), Expect = 3e-04
Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
Query: 1769 CKICQLGFLSKNELDVHNIKQHDAQ----PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNC 1824
C+IC K L+ H ++H C C K F ++AAH+ P
Sbjct: 10 CEICGFTCRQKASLNWH-QRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA 68
Query: 1825 QCDVCGKSFA 1834
+ G S
Sbjct: 69 PQESSGPSSG 78
Score = 40.1 bits (94), Expect = 4e-04
Identities = 14/108 (12%), Positives = 25/108 (23%), Gaps = 31/108 (28%)
Query: 741 HNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFTFETGLMGVVTRDEW 800
+G C CG + +++ + H +KH
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKH----------------AETVA---------- 35
Query: 801 EILLRDKVRICPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECDKIFA 848
C C K F ++ H + H + E
Sbjct: 36 -----ALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGPSSG 78
Score = 39.3 bits (92), Expect = 6e-04
Identities = 9/53 (16%), Positives = 15/53 (28%), Gaps = 3/53 (5%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHT---GLKPYICHICKNSYVAAKGLKRHLKRH 65
+C C K+ L H H + C C + + H +
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 39.3 bits (92), Expect = 6e-04
Identities = 15/69 (21%), Positives = 23/69 (33%), Gaps = 5/69 (7%)
Query: 1625 CKKCQLGFLSKNELNVHNIKQHDAQ----PHTCPVCKKIFVNKFNLTTHKKLHLPMNRNH 1680
C+ C K LN H ++H C C K F ++ H+ P
Sbjct: 10 CEICGFTCRQKASLNWH-QRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA 68
Query: 1681 QCDTCGKSF 1689
++ G S
Sbjct: 69 PQESSGPSS 77
Score = 38.2 bits (89), Expect = 0.002
Identities = 8/54 (14%), Positives = 13/54 (24%), Gaps = 3/54 (5%)
Query: 330 FECFHCGAKFISRTHIADHMTSHT---GIKNHVCSICQSTYTTARGLKRHNKNH 380
+C CG + + H H C C + + H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 35.8 bits (83), Expect = 0.012
Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Query: 1566 FPCRLCSQEFGTKKQRKKHERKDHETRGV--FSCDLCSYTSTRKYYLVKHKSRHIKEYTV 1623
C +C K H+RK ET F C+ C + + H+S+ +
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 1624 FCKKC 1628
++
Sbjct: 68 APQES 72
Score = 33.9 bits (78), Expect = 0.045
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 873 LECHYCGITKNNKTLLRDHISAH---LGIKPYCCIFCEEKYFSKKSLKRHEAKH 923
L+C CG T K L H H + + C FC +++ S+ H +K
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 33.1 bits (76), Expect = 0.088
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 126 KCPICGDRYKSGTDMRRHYR--DLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVH 177
+C ICG + + H R + + PCE CGKRF V HR H
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62
Score = 33.1 bits (76), Expect = 0.10
Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Query: 1867 FSCDLCSYTSTQKYYLVKHKSRHIKDYNVF---CKICQLGFLSKNELDVHNIKQHDAQPH 1923
C++C +T QK L H+ +H + C+ C F + + H K H A
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 1924 TCP 1926
Sbjct: 68 APQ 70
Score = 32.4 bits (74), Expect = 0.20
Identities = 15/88 (17%), Positives = 25/88 (28%), Gaps = 20/88 (22%)
Query: 78 YQCDICSKMFIEHHAMVKHRDWLHAIH--FRSEKNLTSEEWRQLVIKNARKCPICGDRYK 135
QC+IC + ++ H+ H + C CG R++
Sbjct: 8 LQCEICGFTCRQKASLNWHQ----RKHAETVAALRF--------------PCEFCGKRFE 49
Query: 136 SGTDMRRHYRDLHDSTRKCPCEVCGKRF 163
+ H H + P E G
Sbjct: 50 KPDSVAAHRSKSHPALLLAPQESSGPSS 77
Score = 31.6 bits (72), Expect = 0.30
Identities = 12/49 (24%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVHIEI---KTFSCEECDKIFATREKLQRH 856
C C ++ H + H E F CE C K F + + H
Sbjct: 10 CEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAH 57
Score = 31.2 bits (71), Expect = 0.44
Identities = 11/68 (16%), Positives = 14/68 (20%), Gaps = 4/68 (5%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHYCGITKNNKTLLRDHISAH 895
CE C + L H H C +CG + H S
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQR-KHAETVAALR---FPCEFCGKRFEKPDSVAAHRSKS 61
Query: 896 LGIKPYCC 903
Sbjct: 62 HPALLLAP 69
Score = 30.1 bits (68), Expect = 1.2
Identities = 16/81 (19%), Positives = 21/81 (25%), Gaps = 22/81 (27%)
Query: 895 HLGIKPYCCIFCEEKYFSKKSLKRHEAKHNKVYNKAQYQDYQIQDLSMDQYRELVQSKER 954
G C C K SL H+ KH + ++
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRF---------------------- 39
Query: 955 KCPKCEKEFSTPRYMRKHLRK 975
C C K F P + H K
Sbjct: 40 PCEFCGKRFEKPDSVAAHRSK 60
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 72
Score = 72.9 bits (180), Expect = 8e-16
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 434 LKAHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVH 491
IH+GE+P C CGK L H HTGE+P+ C CG + L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 492 MRKHTGERPY 501
R HT
Sbjct: 62 QRIHTSGPSS 71
Score = 72.5 bits (179), Expect = 1e-15
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 1079 LNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLH 1138
+ H+GE+PY C CG +F S L H R H GE+P+ C ECG++F+ S H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 1139 LKKHAG 1144
+ H
Sbjct: 62 QRIHTS 67
Score = 71.3 bits (176), Expect = 3e-15
Identities = 25/68 (36%), Positives = 32/68 (47%)
Query: 706 LKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLH 765
H+GE+PY C CG F L H R H GE+PY C ECG++F+ S H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 766 LKKHAGFK 773
+ H
Sbjct: 62 QRIHTSGP 69
Score = 69.0 bits (170), Expect = 2e-14
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 1256 LKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIH 1315
IH+ + + C CGK F + L +H+RVHTG KPY C C K F+Q S L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 1316 RKLH 1319
+++H
Sbjct: 62 QRIH 65
Score = 67.5 bits (166), Expect = 6e-14
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 680 LKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVH 737
+H+GE+ Y C CGK L +H HTGE+PY C CG F L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 738 MRKHNGERPY 747
R H
Sbjct: 62 QRIHTSGPSS 71
Score = 67.1 bits (165), Expect = 8e-14
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 460 LKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLH 519
H+GE+P+GC CG + L H R HTGE+PY C CG +F+ H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 520 LKRHT 524
+ HT
Sbjct: 62 QRIHT 66
Score = 65.6 bits (161), Expect = 3e-13
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 1053 LQQHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIH 1110
HSGEK C CGK L +H HTGE+PY C CG +F S L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 1111 IRKHNGERPF 1120
R H
Sbjct: 62 QRIHTSGPSS 71
Score = 55.6 bits (135), Expect = 1e-09
Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERP 472
G+K Y C CG S L H R+HTGE+P C CGK L +H HT
Sbjct: 11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS 70
Query: 473 FG 474
G
Sbjct: 71 SG 72
Score = 53.6 bits (130), Expect = 5e-09
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 1284 LEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKF 1334
+H+G KPY C C K F++ S L H+++H K + C CG F
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAF 52
Score = 52.9 bits (128), Expect = 9e-09
Identities = 19/58 (32%), Positives = 24/58 (41%)
Query: 1241 YPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYA 1298
Y C C K S L H +H + + C CGK F Q L H+R+HT
Sbjct: 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSSG 72
Score = 51.7 bits (125), Expect = 2e-08
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 393 YKCDKCDKLFIEQSEMVQHRDWVH-GDKCYLCKICGA--RVKSNLKAHMRIHTGERP 446
Y C +C K F S +VQH+ VH G+K Y C CG S L H RIHT
Sbjct: 15 YGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS 70
Score = 46.7 bits (112), Expect = 1e-06
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 663 GNKYHSCKVCGAEI--KGSLKEHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERP 718
G K + C CG L +H VHTGE+ Y C CGK L H HT
Sbjct: 11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS 70
Query: 719 YA 720
Sbjct: 71 SG 72
Score = 46.3 bits (111), Expect = 2e-06
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 281 GMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFI 340
G +HS +P+ C CGK F LVQH +RVH G K ++C CG F
Sbjct: 1 GSSGSSG-IHSGEKPYGCVECGKAFSRSSILVQH-QRVHTGEKP-----YKCLECGKAFS 53
Query: 341 SRTHIADHMTSHTGIK 356
+ + +H HT
Sbjct: 54 QNSGLINHQRIHTSGP 69
Score = 42.5 bits (101), Expect = 4e-05
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 1036 GNKCHICKVCGA--KIKGNLQQHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERP 1091
G K + C CG L QH H+GEK C CGK L H HT
Sbjct: 11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS 70
Query: 1092 YA 1093
Sbjct: 71 SG 72
Score = 37.1 bits (87), Expect = 0.004
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
C CG F+ L H HTG K YKC C +S L H+ H
Sbjct: 16 GCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65
Score = 36.7 bits (86), Expect = 0.005
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRH 1698
P+ C C K F L H+++H P ++C CGK+F+ N+ L H
Sbjct: 14 PYGCVECGKAFSRSSILVQHQRVHTGEKP----YKCLECGKAFSQNSGLINH 61
Score = 36.3 bits (85), Expect = 0.007
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
P+ C C K F L H+++H +K +C CGK+F++ L +H
Sbjct: 14 PYGCVECGKAFSRSSILVQHQRVHTG-EKPYKCLECGKAFSQNSGLINH 61
Score = 35.5 bits (83), Expect = 0.010
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEK 212
C CGK F+ + QH++V H G +K ++C C K + GL +H HT
Sbjct: 17 CVECGKAFSRSSILVQHQRV-HTG---EKPYKCLECGKAFSQNSGLINHQRIHTSGP 69
Score = 35.1 bits (82), Expect = 0.017
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 269 CPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
C C K + + + H R VH+ +P++C CGK F L+ H+ R+H
Sbjct: 17 CVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLINHQ-RIHTSGP 69
Score = 34.8 bits (81), Expect = 0.019
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 30 LLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSKMFIE 89
H+G KPY C C ++ + L +H + H TG E Y+C C K F +
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH---TG----EKPYKCLECGKAFSQ 54
Query: 90 HHAMVKHR 97
+ ++ H+
Sbjct: 55 NSGLINHQ 62
Score = 34.4 bits (80), Expect = 0.027
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 8/67 (11%)
Query: 592 LQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFIR 650
H+G K Y C C +S L +H+ H GE P KC C K F +
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH---TGEKP----YKCLECGKAFSQ 54
Query: 651 NYMLRKH 657
N L H
Sbjct: 55 NSGLINH 61
Score = 34.4 bits (80), Expect = 0.028
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 1158 CKECNIGFYSSTHLHSHGIKVH-GLPPFICEHCSKPFTSKGNLTVH 1202
C EC F S+ L H +VH G P+ C C K F+ L H
Sbjct: 17 CVECGKAFSRSSILVQHQ-RVHTGEKPYKCLECGKAFSQNSGLINH 61
Score = 34.4 bits (80), Expect = 0.032
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
C C +S S L+ H HTG KPY C C ++ GL H + H
Sbjct: 16 GCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65
Score = 33.2 bits (77), Expect = 0.078
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 1183 PFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTSYKRHLKQH 1234
P+ C C K F+ L H + + + ++C C K F+ + H + H
Sbjct: 14 PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65
Score = 32.4 bits (75), Expect = 0.16
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 8/69 (11%)
Query: 171 QHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAMLK 230
+ H G +K + C C K + L H HTGEK + C C + F ++
Sbjct: 4 GSSGI-HSG---EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNS--- 56
Query: 231 RHLVKHSRM 239
L+ H R+
Sbjct: 57 -GLINHQRI 64
Score = 30.5 bits (70), Expect = 0.70
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 975 KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPSMIHKCPTCYKIFTENHALKKH 1030
K + C CG ++ L +H+ H +GE P +KC C K F++N L H
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQRVH---TGEKP----YKCLECGKAFSQNSGLINH 61
Score = 29.0 bits (66), Expect = 2.1
Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 8/58 (13%)
Query: 955 KCPKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELP 1007
C +C K FS + +H R K +KC CG ++ L H+ H +
Sbjct: 16 GCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH---TSGPS 70
Score = 28.6 bits (65), Expect = 3.5
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPY 43
+C C +S S L++H HT
Sbjct: 44 KCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 28.2 bits (64), Expect = 4.2
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHYCGITKNNKTLLRDHISAH 895
K + C EC K F+ L +H +H G + P +C CG + + L +H H
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQR-VHTGEK---P---YKCLECGKAFSQNSGLINHQRIH 65
Query: 896 LGIKPY 901
Sbjct: 66 TSGPSS 71
Score = 27.8 bits (63), Expect = 5.5
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 874 ECHYCGITKNNKTLLRDHISAHLGIKPYCCIFCEEKYFSKKS-LKRHEAKH 923
C CG + ++L H H G KPY C+ C K FS+ S L H+ H
Sbjct: 16 GCVECGKAFSRSSILVQHQRVHTGEKPYKCLEC-GKAFSQNSGLINHQRIH 65
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double
helix, transcription/DNA complex; HET: DNA; 2.80A
{Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Length = 66
Score = 68.7 bits (169), Expect = 2e-14
Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 1085 THTGERPYACEFCGSSFKDKSYLRIHIR--KHNGERPFTCSECGQSFAARSAFSLHLKKH 1142
T GE Y C+ C + S H + + C C + F + + H+K
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 1143 AG 1144
Sbjct: 64 HK 65
Score = 63.3 bits (155), Expect = 1e-12
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 1262 IHANNRVFTCEVCGKGFIQKRYLEEHKRV--HTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+ C+VC + + H K Y C C K+FT+K + H K+
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 63.3 bits (155), Expect = 1e-12
Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 712 THTGERPYACEICGGTFKTKWYLGVHMR--KHNGERPYMCSECGQSFAARSAFSLHLKKH 769
T GE Y C++C + H + Y C C + F + + H+K
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 770 AG 771
Sbjct: 64 HK 65
Score = 61.4 bits (150), Expect = 6e-12
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Query: 466 THTGERPFGCEVCGSTYKYKYYLAVHMR--KHTGERPYVCNYCGHSFAARPAFNLHLKRH 523
T GE + C+VC Y + H + Y C +C F + H+K
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 524 TE 525
+
Sbjct: 64 HK 65
Score = 59.1 bits (144), Expect = 5e-11
Identities = 10/63 (15%), Positives = 19/63 (30%), Gaps = 4/63 (6%)
Query: 439 RIHTGERPVCCHICGK--KLRGKLKDHMLT--HTGERPFGCEVCGSTYKYKYYLAVHMRK 494
GE C +C + H +T + + C C + K + H++
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 495 HTG 497
Sbjct: 63 IHK 65
Score = 58.7 bits (143), Expect = 6e-11
Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Query: 687 HTGERKYCCHICGK--KMRGKLKEHMLT--HTGERPYACEICGGTFKTKWYLGVHMRKHN 742
GE Y C +C + H +T + Y C C F K + H++ +
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Query: 743 G 743
Sbjct: 65 K 65
Score = 58.3 bits (142), Expect = 7e-11
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 1059 THSGEKKICCHICGK--KLRGRLNEHMLT--HTGERPYACEFCGSSFKDKSYLRIHIRKH 1114
T GE C +C + H +T + Y C FC F K + H++
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 1115 NG 1116
+
Sbjct: 64 HK 65
Score = 51.0 bits (123), Expect = 3e-08
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 1288 KRVHTGYKPYACDLCSKQFTQKSTLNIHR--KLHLNIKDFICDLCGAKF 1334
+ G Y C +CS+ +T S H N+K + C C +F
Sbjct: 2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEF 50
Score = 47.2 bits (113), Expect = 7e-07
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 1241 YPCTVCSKNLSSPYRLKTHMLI--HANNRVFTCEVCGKGFIQKRYLEEHKRVHTG 1293
Y C VCS+ + H + N +V+ C C K F +K + H ++
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 46.8 bits (112), Expect = 1e-06
Identities = 19/96 (19%), Positives = 27/96 (28%), Gaps = 34/96 (35%)
Query: 1112 RKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIGYTVFCKECNIGFYSSTHL 1171
GE + C C + + S + +H T
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHIS----NFCRH------YV------------------TSH 34
Query: 1172 HSHGIKVHGLPPFICEHCSKPFTSKGNLTVHVKYYH 1207
+ + C C K FT K N+T HVK H
Sbjct: 35 KR------NVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Score = 44.5 bits (106), Expect = 7e-06
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 6/67 (8%)
Query: 598 THTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFIRNYMLRK 656
T G Y+C VC Y+ + + RH + + CP C K F R +
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKR-NVKV----YPCPFCFKEFTRKDNMTA 58
Query: 657 HLDFVHG 663
H+ +H
Sbjct: 59 HVKIIHK 65
Score = 43.3 bits (103), Expect = 2e-05
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 393 YKCDKCDKLFIEQSEMVQH-RDWVH-GDKCYLCKICGAR--VKSNLKAHMRIHTG 443
Y+C C +++ S +H K Y C C K N+ AH++I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 42.9 bits (102), Expect = 3e-05
Identities = 11/67 (16%), Positives = 23/67 (34%), Gaps = 6/67 (8%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHER-RVHLGVKKIKHSNFECFHCGAKFISRTHIADH 348
++CK C + + + +H VK + C C +F + ++ H
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV-----YPCPFCFKEFTRKDNMTAH 59
Query: 349 MTSHTGI 355
+ I
Sbjct: 60 VKIIHKI 66
Score = 41.8 bits (99), Expect = 5e-05
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 1183 PFICEHCSKPFTSKGNLTVHVKYYHAKTL--FECNICLKTFNFKTSYKRHLKQH 1234
+ C+ CS+ +T N H H + + + C C K F K + H+K
Sbjct: 10 TYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 40.2 bits (95), Expect = 2e-04
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 1649 QPHTCPVCKKIFVNKFNLTTHKKLHLPMN-RNHQCDTCGKSFTGNNHLKRHIYSVH 1703
+ C VC +++ + N H N + + C C K FT +++ H+ +H
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Score = 40.2 bits (95), Expect = 2e-04
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 1793 QPHTCPVCKKIFVNKVTLAAHKKIHL-PIDKNCQCDVCGKSFARTFHLKSHISSVH 1847
+ C VC +++ + H K C C K F R ++ +H+ +H
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Score = 39.8 bits (94), Expect = 3e-04
Identities = 8/52 (15%), Positives = 16/52 (30%), Gaps = 3/52 (5%)
Query: 578 ECNICGALFATKYTLQDHM--NTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
C +C ++ H + K Y C C ++ ++ H
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 39.5 bits (93), Expect = 4e-04
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 7/64 (10%)
Query: 263 LQRVKT------CPLCKKTYQSAKGMRLHIR-EVHSKVRPHQCKGCGKYFKSQRHLVQHE 315
++ K C +C + Y H V+ + C C K F + ++ H
Sbjct: 1 MEFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60
Query: 316 RRVH 319
+ +H
Sbjct: 61 KIIH 64
Score = 39.1 bits (92), Expect = 6e-04
Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 16 ECHHCAMRYSSKSQLLDHL--NSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
C C+ Y+ S H + +K Y C C + + H+K
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 38.7 bits (91), Expect = 6e-04
Identities = 10/58 (17%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 184 KKFECAHCSKTYLSRVGLEDH--INNHTGEKGHICEICNRDFYSDAMLKRHLVKHSRM 239
+ C CS+ Y H ++ K + C C ++F + H+ ++
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 38.7 bits (91), Expect = 8e-04
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 1680 HQCDTCGKSFTGNNHLKRHIYSVHLKRDTKFPCRLCSQEFDTKEQRKKHERKDHE 1734
++C C + +T ++ RH + H + +PC C +EF K+ H + H+
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 38.3 bits (90), Expect = 0.001
Identities = 13/50 (26%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Query: 739 RKHNGERPYMCSECGQSFAARSAFSLHL--KKHAGFKQTIECEYCHNTFT 786
GE Y C C + + S F H K C +C FT
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVK-VYPCPFCFKEFT 51
Score = 36.8 bits (86), Expect = 0.004
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 975 KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPSMIHKCPTCYKIFTENHALKKHLDWV 1034
++C VC YT + + RH + K + CP C+K FT + H+ +
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHK-RNVKV----YPCPFCFKEFTRKDNMTAHVKII 63
Query: 1035 HG 1036
H
Sbjct: 64 HK 65
Score = 36.0 bits (84), Expect = 0.006
Identities = 14/61 (22%), Positives = 16/61 (26%), Gaps = 5/61 (8%)
Query: 37 HTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSKMFIEHHAMVKH 96
G Y C +C Y RH +Y C C K F M H
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRH-YVTSHKRN----VKVYPCPFCFKEFTRKDNMTAH 59
Query: 97 R 97
Sbjct: 60 V 60
Score = 36.0 bits (84), Expect = 0.006
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 126 KCPICGDRYKSGTDMRRHYR-DLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVH 177
+C +C Y ++ RHY + + PC C K F + H K++H
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Score = 36.0 bits (84), Expect = 0.007
Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 35/92 (38%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHYCGITKNNKTLLRDHISAH 895
T+ C+ C +++ RH+ S
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHY---------------------------------VTSHK 35
Query: 896 LGIKPYCCIFCEEKYFSKKS-LKRHEAKHNKV 926
+K Y C FC K F++K + H +K+
Sbjct: 36 RNVKVYPCPFC-FKEFTRKDNMTAHVKIIHKI 66
Score = 35.6 bits (83), Expect = 0.009
Identities = 12/53 (22%), Positives = 17/53 (32%), Gaps = 6/53 (11%)
Query: 1042 CKVCGA--KIKGNLQQHMET--HSGEKKICCHICGKKL--RGRLNEHMLTHTG 1088
CKVC N +H T K C C K+ + + H+
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 35.6 bits (83), Expect = 0.010
Identities = 7/31 (22%), Positives = 9/31 (29%), Gaps = 4/31 (12%)
Query: 493 RKHTGERPYVCNYCGHSFAARPAFNLHLKRH 523
GE Y C C + + RH
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHIS----NFCRH 29
Score = 34.5 bits (80), Expect = 0.024
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 811 CPKCNKEFYSDRTMRRHLK-QVHIEIKTFSCEECDKIFATREKLQRHWNYIHQ 862
C C++ + RH +K + C C K F ++ + H IH+
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 33.3 bits (77), Expect = 0.056
Identities = 10/65 (15%), Positives = 19/65 (29%), Gaps = 13/65 (20%)
Query: 1825 QCDVCGKSFARTFHLKSHISSVHLKREQRKKHERKDHETQGLFSCDLCSYTSTQKYYLVK 1884
+C VC + + + H + H ++ C C T+K +
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSH-------------KRNVKVYPCPFCFKEFTRKDNMTA 58
Query: 1885 HKSRH 1889
H
Sbjct: 59 HVKII 63
Score = 32.1 bits (74), Expect = 0.15
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 1625 CKKCQLGFLSKNELNVHNIKQH--DAQPHTCPVCKKIFVNKFNLTTHKKLH 1673
CK C + + H + H + + + CP C K F K N+T H K+
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 29.1 bits (66), Expect = 2.3
Identities = 16/83 (19%), Positives = 24/83 (28%), Gaps = 29/83 (34%)
Query: 895 HLGIKPYCCIFCEEKYFSKKS-LKRHEAKHNKVYNKAQYQDYQIQDLSMDQYRELVQSKE 953
G Y C C + ++ S RH Y +
Sbjct: 5 KEGEHTYRCKVCS-RVYTHISNFCRH-------------------------YVTSHKRNV 38
Query: 954 R--KCPKCEKEFSTPRYMRKHLR 974
+ CP C KEF+ M H++
Sbjct: 39 KVYPCPFCFKEFTRKDNMTAHVK 61
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation, hydrophobic
core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Length = 85
Score = 65.3 bits (160), Expect = 5e-13
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 1071 CGK--KLRGRLNEHMLTHTGERPYAC--EFCGSSFKDKSYLRIHIRKHNGERPFTCSECG 1126
CGK K +L H +HT + PY C E C F S L+ H + H G C
Sbjct: 9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68
Query: 1127 QSFAARSAFSLHLKKHAGSH 1146
++L+LK A H
Sbjct: 69 FVG---KTWTLYLKHVAECH 85
Score = 63.8 bits (156), Expect = 2e-12
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 1270 TCEVCGKGFIQKRYLEEHKRVHTGYKPYACD--LCSKQFTQKSTLNIHRKLHLNIKDFIC 1327
E CGK F + L+ H+ HT PY C C K+F+ S L H K+H
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64
Query: 1328 DLCGAKFYEFNTYVTHVHETH 1348
D C + Y+ HV E H
Sbjct: 65 DSCSFVGKTWTLYLKHVAECH 85
Score = 63.4 bits (155), Expect = 2e-12
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 9/83 (10%)
Query: 693 YCCHI--CGK--KMRGKLKEHMLTHTGERPYAC--EICGGTFKTKWYLGVHMRKHNGERP 746
Y CH CGK K +LK H +HT + PY C E C F L H + H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 747 YMCSECGQSFAARSAFSLHLKKH 769
C ++L+LK
Sbjct: 62 KKDDSCSFVG---KTWTLYLKHV 81
Score = 58.4 bits (142), Expect = 1e-10
Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 4/81 (4%)
Query: 1241 YPCTV--CSKNLSSPYRLKTHMLIHANNRVFTC--EVCGKGFIQKRYLEEHKRVHTGYKP 1296
Y C C K +LK H H + C E C K F L+ H++VH GY
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 1297 YACDLCSKQFTQKSTLNIHRK 1317
D CS + H
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 58.0 bits (141), Expect = 2e-10
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 7/79 (8%)
Query: 452 CGK--KLRGKLKDHMLTHTGERPFGC--EVCGSTYKYKYYLAVHMRKHTGERPYVCNYCG 507
CGK K +LK H +HT + P+ C E C + L H + H G + C
Sbjct: 9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68
Query: 508 HSFAARPAFNLHLKRHTER 526
+ L+LK E
Sbjct: 69 FVGK---TWTLYLKHVAEC 84
Score = 56.5 bits (137), Expect = 7e-10
Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
Query: 432 SNLKAHMRIHTGERPVCCH--ICGKK--LRGKLKDHMLTHTGERPFGCEVCGSTYKYKYY 487
+ LK H HT + P C C K+ L +LK H H G + C K
Sbjct: 17 NQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTL 76
Query: 488 LAVHMRK 494
H+ +
Sbjct: 77 YLKHVAE 83
Score = 56.1 bits (136), Expect = 9e-10
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 14/93 (15%)
Query: 1092 YACEF--CGSSFKDKSYLRIHIRKHNGERPFTCSE--CGQSFAARSAFSLHLKKHAGSHI 1147
Y C F CG +FK + L++H H + P+ C C + F+ S LK+H
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPS----RLKRHE---- 53
Query: 1148 LRRHIGYTVF-CKECNIGFYSSTHLHSHGIKVH 1179
+ H GY C+ + T H + H
Sbjct: 54 -KVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 51.5 bits (124), Expect = 4e-08
Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Query: 679 SLKEHMIVHTGERKYCCH--ICGKK--MRGKLKEHMLTHTGERPYACEICGGTFKTKWYL 734
LK H HT + Y C C K+ + +LK H H G + C KT
Sbjct: 18 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY 77
Query: 735 GVHMRK 740
H+ +
Sbjct: 78 LKHVAE 83
Score = 48.4 bits (116), Expect = 4e-07
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 721 CEICGGTFKTKWYLGVHMRKHNGERPYMCSE--CGQSFAARSAFSLHLKKHAGFKQT--I 776
E CG FK L VH H + PY C C + F+ S H K HAG+
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 65
Query: 777 ECEYCHNTFT 786
C + T+T
Sbjct: 66 SCSFVGKTWT 75
Score = 46.5 bits (111), Expect = 2e-06
Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Query: 475 CEVCGSTYKYKYYLAVHMRKHTGERPYVCNY--CGHSFAARPAFNLHLKRHTERGDVRHI 532
E CG +K L VH HT + PY C + C F+ H K H +
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 65
Query: 533 ECQHSLK 539
C K
Sbjct: 66 SCSFVGK 72
Score = 42.2 bits (100), Expect = 7e-05
Identities = 19/83 (22%), Positives = 26/83 (31%), Gaps = 8/83 (9%)
Query: 298 CKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFH--CGAKFISRTHIADHMTSHTGI 355
+ CGK FK L H+ H +EC H C +F + + H H G
Sbjct: 6 FENCGKAFKKHNQLKVHQF-SHTQQLP-----YECPHEGCDKRFSLPSRLKRHEKVHAGY 59
Query: 356 KNHVCSICQSTYTTARGLKRHNK 378
C T +H
Sbjct: 60 PCKKDDSCSFVGKTWTLYLKHVA 82
Score = 39.9 bits (94), Expect = 5e-04
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 9/85 (10%)
Query: 392 MYKCD--KCDKLFIEQSEMVQHRDWVHGDKCYLCK--ICGAR--VKSNLKAHMRIHTG-- 443
MY C C K F + +++ H+ Y C C R + S LK H ++H G
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60
Query: 444 -ERPVCCHICGKKLRGKLKDHMLTH 467
++ C GK LK H
Sbjct: 61 CKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 39.5 bits (93), Expect = 6e-04
Identities = 23/88 (26%), Positives = 32/88 (36%), Gaps = 10/88 (11%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDV--CDNGYSSLKHLKRHKMKHLQENGELP 634
CG F L+ H +HT Y+C CD +S LKRH+ H G
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH---AGYPC 61
Query: 635 PSKIQKCPICHKIFIRNYMLRKHLDFVH 662
+K C + + KH+ H
Sbjct: 62 ----KKDDSCSFVGKTWTLYLKHVAECH 85
Score = 37.2 bits (87), Expect = 0.004
Identities = 21/84 (25%), Positives = 28/84 (33%), Gaps = 6/84 (7%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICH--ICKNSYVAAKGLKRHLKRHMQATGQLS 73
+C + +QL H SHT PY C C + LKRH K H G
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH---AGYPC 61
Query: 74 VEDMYQCDICSKMFIEHHAMVKHR 97
+ C K + + V
Sbjct: 62 -KKDDSCSFVGKTWTLYLKHVAEC 84
Score = 36.4 bits (85), Expect = 0.008
Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 9/88 (10%)
Query: 331 ECFHCGAKFISRTHIADHMTSHTGIKNHVCS--ICQSTYTTARGLKRHNKNHLREAGVLR 388
+CG F + H SHT + C C ++ LKRH K H
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY----- 59
Query: 389 ADEMYKCDKCDKLFIEQSEMVQHRDWVH 416
K D C + + ++H H
Sbjct: 60 --PCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 35.7 bits (83), Expect = 0.013
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 153 KCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAH--CSKTYLSRVGLEDHINNHTG 210
C E CGK F ++K H+ H + +EC H C K + L+ H H G
Sbjct: 3 VCHFENCGKAFKKHNQLKVHQF-SHTQ---QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58
Query: 211 EKGHICEICNRDFYSDAMLKRHLVK 235
+ C+ + + +H+ +
Sbjct: 59 YPCKKDDSCSFVGKTWTLYLKHVAE 83
Score = 34.1 bits (79), Expect = 0.056
Identities = 24/87 (27%), Positives = 30/87 (34%), Gaps = 11/87 (12%)
Query: 1652 TCPVCKKIFVNKFNLTTHKKLH---LPMNRNHQCD--TCGKSFTGNNHLKRHIYSVHLKR 1706
C K F L H+ H LP ++C C K F+ + LKRH VH
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSHTQQLP----YECPHEGCDKRFSLPSRLKRH-EKVH-AG 58
Query: 1707 DTKFPCRLCSQEFDTKEQRKKHERKDH 1733
CS T KH + H
Sbjct: 59 YPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 33.0 bits (76), Expect = 0.14
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 187 ECAHCSKTYLSRVGLEDHINNHTGEKGHIC--EICNRDFYSDAMLKRHLVKHS 237
+C K + L+ H +HT + + C E C++ F + LKRH H+
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA 57
Score = 32.6 bits (75), Expect = 0.18
Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 14/87 (16%)
Query: 956 CPKCEKEFSTPRYMRKHLR-----KKFKCDV--CGNGYTSVKHLKRHKIKHMKESGELPP 1008
C K F ++ H ++C C ++ LKRH+ H +G
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH---AGYPC- 61
Query: 1009 SMIHKCPTCYKIFTENHALKKHLDWVH 1035
K +C + KH+ H
Sbjct: 62 ---KKDDSCSFVGKTWTLYLKHVAECH 85
Score = 32.2 bits (74), Expect = 0.27
Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 31/110 (28%)
Query: 1011 IHKC--PTCYKIFTENHALKKHLDWVHGNKCHICKV--CGAK--IKGNLQQHMETHSGEK 1064
++ C C K F +++ LK H + C C + + L++H + H+G
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60
Query: 1065 KICCHICGKKLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKH 1114
++ +C F G ++ YL+ H
Sbjct: 61 C-----------------------KKDDSCSFVGKTWTL--YLKHVAECH 85
Score = 31.8 bits (73), Expect = 0.37
Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 16/92 (17%)
Query: 977 FKCDV--CGNGYTSVKHLKRHKIKHMKESGELPPSMIHKC--PTCYKIFTENHALKKHLD 1032
+ C CG + LK H+ H + +LP ++C C K F+ LK+H
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSH---TQQLP----YECPHEGCDKRFSLPSRLKRHEK 54
Query: 1033 WVH----GNKCHICKVCGAKIKGNLQQHMETH 1060
VH K C G L+ E H
Sbjct: 55 -VHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 31.1 bits (71), Expect = 0.62
Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 270 PLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVH 319
C K + ++ H + VH+ + C K+ ++H H
Sbjct: 37 EGCDKRFSLPSRLKRHEK-VHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 30.7 bits (70), Expect = 0.76
Identities = 24/117 (20%), Positives = 28/117 (23%), Gaps = 40/117 (34%)
Query: 604 YKCDV--CDNGYSSLKHLKRHKMKHLQENGELPPSKIQKC--PICHKIFIRNYMLRKHLD 659
Y C C + LK H+ H Q+ +C C K F
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQ-------LPYECPHEGCDKRFSLPS------- 47
Query: 660 FVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERK---YCCHICGKKMRGKLKEHMLTH 713
LK H VH G C GK LK H
Sbjct: 48 -------------------RLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 29.1 bits (66), Expect = 2.6
Identities = 22/96 (22%), Positives = 31/96 (32%), Gaps = 20/96 (20%)
Query: 1796 TCPVCKKIFVNKVTLAAHKKIH---LPIDKNCQCDVCGKSFARTFHLKSHISSVHLKREQ 1852
C K F L H+ H LP + C + C K F+ L
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSHTQQLPYE--CPHEGCDKRFSLPSRL------------- 49
Query: 1853 RKKHERKDHETQGLFSCDLCSYTSTQKYYLVKHKSR 1888
K+HE+ H D CS+ +KH +
Sbjct: 50 -KRHEKV-HAGYPCKKDDSCSFVGKTWTLYLKHVAE 83
Score = 28.4 bits (64), Expect = 5.0
Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Query: 1625 CKKCQLGFLSKNELNVHNIKQHDAQPHTC--PVCKKIFVNKFNLTTHKKLHLPMNRNHQC 1682
+ C F N+L VH P+ C C K F L H+K+H +
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY-PCKKD 64
Query: 1683 DTCGKSFTGNNHLKRHIYSVH 1703
D+C +H+ H
Sbjct: 65 DSCSFVGKTWTLYLKHVAECH 85
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1 g.37.1.1
Length = 60
Score = 64.0 bits (157), Expect = 6e-13
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 1269 FTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIH-RKLH 1319
F CEVC + F ++ +L+ H R HT KPY C LC++ FT++ L H +K+H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 59.8 bits (146), Expect = 2e-11
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 1090 RPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKK-HAG 1144
R + CE C +F + +L+ H R H E+P+ C C ++F R H +K H+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 57.1 bits (139), Expect = 2e-10
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 717 RPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKK-HAG 771
R + CE+C F + +L H R H E+PY C C ++F R H +K H+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 56.0 bits (136), Expect = 5e-10
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 471 RPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHTER 526
R F CEVC + + +L H R HT E+PY C C +F R L RH ++
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRD----LLIRHAQK 52
Score = 50.9 bits (123), Expect = 3e-08
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 1068 CHICGKKLRGR--LNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRK-HNGE 1117
C +C + + L H +HT E+PY C C +F + L H +K H+G
Sbjct: 5 CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 49.0 bits (118), Expect = 2e-07
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 445 RPVCCHICGKKLRGK--LKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRK-HTGE 498
R C +C + + LK H +HT E+P+ C +C + + L H +K H+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 48.6 bits (117), Expect = 2e-07
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 419 KCYLCKICG---ARVKSNLKAHMRIHTGERPVCCHICGKKL--RGKLKDHML-THTGE 470
+ ++C++C AR + +LK H R HT E+P C +C + R L H H+G
Sbjct: 1 RSFVCEVCTRAFAR-QEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 47.5 bits (114), Expect = 4e-07
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 693 YCCHICGKKMRGK--LKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRK-HNGE 744
+ C +C + + LK H +HT E+PY C +C F + L H +K H+G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 42.9 bits (102), Expect = 2e-05
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 1241 YPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEH-KRVHTG 1293
+ C VC++ + LK H H N + + C +C + F ++ L H +++H+G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 41.7 bits (99), Expect = 6e-05
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 1295 KPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKFYEFNTYVTHVHETH 1348
+ + C++C++ F ++ L H + H N K + C LC F + + H + H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 41.7 bits (99), Expect = 6e-05
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 7/62 (11%)
Query: 294 RPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHM-TSH 352
R C+ C + F Q HL +H R H K + C C F R + H H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHY-RSHTNEKP-----YPCGLCNRAFTRRDLLIRHAQKIH 54
Query: 353 TG 354
+G
Sbjct: 55 SG 56
Score = 40.9 bits (97), Expect = 1e-04
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMK 625
C +C FA + L+ H +HT K Y C +C+ ++ L RH K
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52
Score = 39.8 bits (94), Expect = 2e-04
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLHL---PMNRNHQCDTCGKSFTGNNHLKRHIYSVH 1703
C VC + F + +L H + H P + C C ++FT + L RH +H
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKP----YPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 39.4 bits (93), Expect = 4e-04
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHISSVH 1847
C VC + F + L H + H +K C +C ++F R L H +H
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTN-EKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 37.5 bits (88), Expect = 0.002
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 269 CPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLG 321
C +C + + + ++ H R H+ +P+ C C + F + L++H +++H G
Sbjct: 5 CEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 37.1 bits (87), Expect = 0.002
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 665 KYHSCKVCGAEI--KGSLKEHMIVHTGERKYCCHICGKK--MRGKLKEHML-THTGE 716
+ C+VC + LK H HT E+ Y C +C + R L H H+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 35.9 bits (84), Expect = 0.005
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKR 64
C C ++ + L H SHT KPY C +C ++ L RH ++
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52
Score = 34.8 bits (81), Expect = 0.015
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 975 KKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPSMIHKCPTCYKIFTENHALKKHLDWV 1034
+ F C+VC + +HLKRH H + E P + C C + FT L +H +
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH---TNEKP----YPCGLCNRAFTRRDLLIRHAQKI 53
Query: 1035 H 1035
H
Sbjct: 54 H 54
Score = 34.4 bits (80), Expect = 0.022
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 604 YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFIRNYMLRKHLDFVH 662
+ C+VC ++ +HLKRH H E P C +C++ F R +L +H +H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSH---TNEKP----YPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 34.4 bits (80), Expect = 0.024
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 1158 CKECNIGFYSSTHLHSHGIKVH-GLPPFICEHCSKPFTSKGNLTVHVKYYH 1207
C+ C F HL H + H P+ C C++ FT + L H + H
Sbjct: 5 CEVCTRAFARQEHLKRH-YRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 33.6 bits (78), Expect = 0.039
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAMLKRH 232
+ F C C++ + + L+ H +HT EK + C +CNR F +L RH
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49
Score = 33.6 bits (78), Expect = 0.042
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRHNK 378
F C C F + H+ H SHT K + C +C +T L RH +
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ 51
Score = 31.7 bits (73), Expect = 0.21
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 9/57 (15%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVHIEIKT----FSCEECDKIFATREKLQRHWNYIHQG 863
C C + F + HLK+ H T + C C++ F R+ L RH IH G
Sbjct: 5 CEVCTRAF----ARQEHLKR-HYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 31.3 bits (72), Expect = 0.26
Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 1183 PFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTSYKRHLKQH 1234
F+CE C++ F + +L H + + + + C +C + F + + L +H
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAF----TRRDLLIRH 49
Score = 29.8 bits (68), Expect = 0.82
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 955 KCPKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIK-HMKESGE 1005
C C + F+ ++++H R K + C +C +T L RH K H GE
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNLGE 60
Score = 29.8 bits (68), Expect = 1.1
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 874 ECHYCGITKNNKTLLRDHISAHLGIKPYCCIFCEEKYFSKKS-LKRHE 920
C C + L+ H +H KPY C C + F+++ L RH
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLC-NRAFTRRDLLIRHA 50
Score = 29.0 bits (66), Expect = 1.6
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 41 KPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSKMFIEHHAMVKHRDWL 100
+ ++C +C ++ + LKRH + H T E Y C +C++ F +++H +
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH---TN----EKPYPCGLCNRAFTRRDLLIRHAQKI 53
Query: 101 H 101
H
Sbjct: 54 H 54
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 54
Score = 62.2 bits (152), Expect = 3e-12
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 1085 THTGERPYACEFCGSSFKDKSYLRIHIRK-HNGERPFTCSECGQSFA 1130
+ + +PY C+ CG F +L HI++ H ERP C +
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 58.7 bits (143), Expect = 5e-11
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 712 THTGERPYACEICGGTFKTKWYLGVHMRK-HNGERPYMCSECGQSFA 757
+ + +PY C+ CG F +L H+++ H ERP+ C +
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 57.6 bits (140), Expect = 1e-10
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 466 THTGERPFGCEVCGSTYKYKYYLAVHMRK-HTGERPYVCNYCGHSFA 511
+ + +P+ C+ CG + +L H+++ HT ERP+ C +
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 56.8 bits (138), Expect = 2e-10
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEH-KRVHTGYKPYACDLCSKQFTQ 1308
+ + + + C+ CGKGF + +L H K+VHT +P+ C + +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 48.3 bits (116), Expect = 2e-07
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Query: 686 VHTGERKYCCHICGK--KMRGKLKEHM-LTHTGERPYACEICGGTFKT 730
+ + Y C CGK L H+ HT ERP+ C++ +
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 48.3 bits (116), Expect = 2e-07
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHM-LTHTGERPYACEFCGSSFKD 1103
+ S K C CGK LN H+ HT ERP+ C+ S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 47.2 bits (113), Expect = 5e-07
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIH-RKLHLNIKDFICDLCGAKF 1334
+ KPY C C K F++ LN H +++H + + C + +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 46.4 bits (111), Expect = 9e-07
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Query: 436 AHMRIHTGERPVCCHICGK--KLRGKLKDHM-LTHTGERPFGCEVCG 479
+ + +P C CGK L H+ HT ERP C+V
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWV 48
Score = 44.5 bits (106), Expect = 6e-06
Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKF 339
S +P+ C+ CGK F HL H ++VH + +C +
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-----HKCQVWVSGP 51
Score = 40.3 bits (95), Expect = 2e-04
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHM-RIHTGERPVCCHICGK 454
K Y+C+ CG +L H+ ++HT ERP C +
Sbjct: 9 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVS 49
Score = 39.5 bits (93), Expect = 3e-04
Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKK-HAGFKQTIECEYCHNTFT 786
G + +PY+C CG+ F+ + H+K+ H + +C+ + +
Sbjct: 1 GSSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSER-PHKCQVWVSGPS 52
Score = 37.6 bits (88), Expect = 0.002
Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 1158 CKECNIGFYSSTHLHSHGIKVH-GLPPFICEHCSKPFTS 1195
C+ C GF HL+ H +VH P C+ +S
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 36.0 bits (84), Expect = 0.005
Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 13/59 (22%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIG---YTVFCKECNIGF 1165
+ +P+ C CG+ F+ HL HI + H + C+ G
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPD----HLNG----HIKQVHTSERPHK--CQVWVSGP 51
Score = 35.6 bits (83), Expect = 0.007
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 14/59 (23%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKR--HLKRHMQA--TGQLSVEDMYQCDICSKMF 87
+S + KPYIC C KG R HL H++ T E ++C +
Sbjct: 3 SGSSGSVGKPYICQSC------GKGFSRPDHLNGHIKQVHTS----ERPHKCQVWVSGP 51
Score = 35.6 bits (83), Expect = 0.008
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKR-HT 524
+ +PY+C CG F+ N H+K+ HT
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT 37
Score = 34.9 bits (81), Expect = 0.011
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 1183 PFICEHCSKPFTSKGNLTVHVKYYHA--KTLFECNICLKTFN 1222
P+IC+ C K F+ +L H+K H + +C + + +
Sbjct: 12 PYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQVWVSGPS 52
Score = 34.1 bits (79), Expect = 0.021
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 578 ECNICGALFATKYTLQDHM-NTHTGNK-YKCDVCDNGYSS 615
C CG F+ L H+ HT + +KC V +G SS
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 34.1 bits (79), Expect = 0.026
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECDKIFAT 849
C C K F + H+KQVH + C+ ++
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 33.3 bits (77), Expect = 0.045
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 1826 CDVCGKSFARTFHLKSHISSVH 1847
C CGK F+R HL HI VH
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVH 36
Score = 32.9 bits (76), Expect = 0.054
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 268 TCPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKS 307
C C K + + HI++VH+ RPH+C+ S
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 32.2 bits (74), Expect = 0.099
Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 9/56 (16%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRH-KMKHLQENGELPPSKIQKCPICHKIF 648
++ + K Y C C G+S HL H K H E P KC +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH---TSERP----HKCQVWVSGP 51
Score = 32.2 bits (74), Expect = 0.12
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
Query: 955 KCPKCEKEFSTPRYMRKHLR------KKFKCDVCGNGYTS 988
C C K FS P ++ H++ + KC V +G +S
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 32.2 bits (74), Expect = 0.13
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 1682 CDTCGKSFTGNNHLKRHIYSVH 1703
C +CGK F+ +HL HI VH
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVH 36
Score = 31.4 bits (72), Expect = 0.23
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 126 KCPICGDRYKSGTDMRRHYRDLHDSTRKCPCEVCGKRFNS 165
C CG + + H + +H S R C+V +S
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 31.4 bits (72), Expect = 0.25
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 8/49 (16%)
Query: 975 KKFKCDVCGNGYTSVKHLKRH-KIKHMKESGELPPSMIHKCPTCYKIFT 1022
K + C CG G++ HL H K H + E P HKC +
Sbjct: 11 KPYICQSCGKGFSRPDHLNGHIKQVH---TSERP----HKCQVWVSGPS 52
Score = 31.0 bits (71), Expect = 0.29
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINN-HTGEKGHICEICNRDF 223
K + C C K + L HI HT E+ H C++
Sbjct: 11 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 31.0 bits (71), Expect = 0.31
Identities = 11/41 (26%), Positives = 15/41 (36%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLHLPMNRNHQCDTCGKSFT 1690
P+ C C K F +L H K R H+C +
Sbjct: 12 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 31.0 bits (71), Expect = 0.35
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTY 195
C+ CGK F+ + H K VH ++ +C
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTS---ERPHKCQVWVSGP 51
Score = 30.6 bits (70), Expect = 0.40
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 1003 SGELPPSMIHKCPTCYKIFTENHALKKHLDWVH-GNKCHICKVCG 1046
S P + C +C K F+ L H+ VH + H C+V
Sbjct: 8 SVGKP----YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWV 48
Score = 30.6 bits (70), Expect = 0.42
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 640 KCPICHKIFIRNYMLRKHLDFVH-GNKYHSCKVCG 673
C C K F R L H+ VH + H C+V
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWV 48
Score = 30.2 bits (69), Expect = 0.64
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 16 ECHHCAMRYSSKSQLLDHLNS-HTGLKPYICHIC 48
C C +S L H+ HT +P+ C +
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW 47
Score = 29.5 bits (67), Expect = 1.1
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 831 VHIEIKTFSCEECDKIFATREKLQRHWNYIHQG 863
K + C+ C K F+ + L H +H
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS 38
Score = 29.5 bits (67), Expect = 1.1
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 1794 PHTCPVCKKIFVNKVTLAAH-KKIHLPIDKNCQCDVCGKSFA 1834
P+ C C K F L H K++H ++ +C V +
Sbjct: 12 PYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQVWVSGPS 52
Score = 29.1 bits (66), Expect = 1.5
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 330 FECFHCGAKFISRTHIADHMTS-HTGIKNHVCSICQSTYTTA 370
+ C CG F H+ H+ HT + H C + S ++
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG 54
Score = 27.5 bits (62), Expect = 4.8
Identities = 8/37 (21%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Query: 204 HINNHTGEKGHICEICNRDFYSDAMLKRHLVKHSRMI 240
++ + K +IC+ C + F HL H + +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSR----PDHLNGHIKQV 35
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 42
Score = 59.4 bits (145), Expect = 2e-11
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFT 1121
+ GE+PY CE CG+ F+ L+ H+R H G P +
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 58.3 bits (142), Expect = 5e-11
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPY 501
+ GE+P+ CE+CG+ +++ L H+R HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 57.1 bits (139), Expect = 1e-10
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPY 747
+ GE+PY CEICG F+ L H+R H G P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 51.7 bits (125), Expect = 9e-09
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 436 AHMRIHTGERPVCCHICGKKLR--GKLKDHMLTHTGERPF 473
GE+P C ICG + R LK H+ HTG P
Sbjct: 1 GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 51.7 bits (125), Expect = 1e-08
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 683 HMIVHTGERKYCCHICGKKMR--GKLKEHMLTHTGERPYA 720
GE+ Y C ICG + R LK H+ HTG P +
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 49.4 bits (119), Expect = 7e-08
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
G KPY C++C +F TL H ++H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 47.9 bits (115), Expect = 2e-07
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 1056 HMETHSGEKKICCHICGKKLR--GRLNEHMLTHTGERPYA 1093
+ GEK C ICG + R L H+ HTG P +
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 46.7 bits (112), Expect = 6e-07
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 1259 HMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYA 1298
+ + CE+CG F + L+ H R+HTG P +
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 44.8 bits (107), Expect = 3e-06
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERP 446
G+K Y C+ICG R LK+H+RIHTG P
Sbjct: 8 GEKPYPCEICGTRFRHLQTLKSHLRIHTGSGP 39
Score = 41.3 bits (98), Expect = 5e-05
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 737 HMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
GE+PY C CG F HL+ H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 41.3 bits (98), Expect = 5e-05
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
GE+PY C CG F HL+ HT
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHT 35
Score = 39.8 bits (94), Expect = 2e-04
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C CG F HL+ H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 35.9 bits (84), Expect = 0.004
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
+ G K Y C++C + L+ LK H H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 33.6 bits (78), Expect = 0.026
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK 603
C ICG F TL+ H+ HTG+
Sbjct: 13 PCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 31.7 bits (73), Expect = 0.12
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
S G KPY C IC + + LK HL+ H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 31.3 bits (72), Expect = 0.15
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 663 GNKYHSCKVCGAEI--KGSLKEHMIVHTGERKY 693
G K + C++CG +LK H+ +HTG
Sbjct: 8 GEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 30.2 bits (69), Expect = 0.49
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 204 HINNHTGEKGHICEICNRDFYSDAMLKRHLVKH 236
+ GEK + CEIC F LK HL H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 29.8 bits (68), Expect = 0.67
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 1680 HQCDTCGKSFTGNNHLKRHI 1699
+ C+ CG F LK H+
Sbjct: 12 YPCEICGTRFRHLQTLKSHL 31
Score = 29.4 bits (67), Expect = 0.76
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 1825 QCDVCGKSFARTFHLKSHI 1843
C++CG F LKSH+
Sbjct: 13 PCEICGTRFRHLQTLKSHL 31
Score = 29.0 bits (66), Expect = 1.1
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 1183 PFICEHCSKPFTSKGNLTVHV 1203
P+ CE C F L H+
Sbjct: 11 PYPCEICGTRFRHLQTLKSHL 31
Score = 29.0 bits (66), Expect = 1.3
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 1036 GNKCHICKVCGAKI--KGNLQQHMETHSGEK 1064
G K + C++CG + L+ H+ H+G
Sbjct: 8 GEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 29.0 bits (66), Expect = 1.3
Identities = 10/28 (35%), Positives = 11/28 (39%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPY 43
C C R+ L HL HTG P
Sbjct: 13 PCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 28.6 bits (65), Expect = 1.6
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEK 212
K + C C + L+ H+ HTG
Sbjct: 10 KPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 27.8 bits (63), Expect = 2.5
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 294 RPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+P+ C+ CG F+ + L H R+H G
Sbjct: 10 KPYPCEICGTRFRHLQTLKSH-LRIHTGSG 38
Score = 27.5 bits (62), Expect = 3.9
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIK 356
+ C CG +F + H+ HTG
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 26.3 bits (59), Expect = 9.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIH 1817
P+ C +C F + TL +H +IH
Sbjct: 11 PYPCEICGTRFRHLQTLKSHLRIH 34
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 58.3 bits (142), Expect = 5e-11
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ GE+PY C CG +F KSYL IH+R H+GE+P S
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 56.4 bits (137), Expect = 3e-10
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ GE+PY C CG F +K YL +HMR H+GE+P S
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 55.2 bits (134), Expect = 6e-10
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVC 503
+ GE+P+GC CG + K YL +HMR H+GE+P
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 48.7 bits (117), Expect = 1e-07
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ A + + C CGK F K YL H R H+G KP
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 47.9 bits (115), Expect = 2e-07
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
G KPY C C K F+ KS L IH + H
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35
Score = 46.4 bits (111), Expect = 7e-07
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCE 476
+ GE+P C CGK K L HM TH+GE+P G
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 44.5 bits (106), Expect = 4e-06
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGKKMRGK--LKEHMLTHTGERPYACE 722
GE+ Y C CGK K L HM TH+GE+P
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 44.1 bits (105), Expect = 5e-06
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY CSECG++F+++S +H++ H+G K
Sbjct: 1 GSSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 41.4 bits (98), Expect = 4e-05
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYACE 1095
+ +GEK C CGK + L HM TH+GE+P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 41.4 bits (98), Expect = 5e-05
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
GE+PY C+ CG +F+++ +H++ H+
Sbjct: 1 GSSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHS 36
Score = 39.8 bits (94), Expect = 2e-04
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ CSECG++F+++S +H++ H+G
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG 37
Score = 36.0 bits (84), Expect = 0.005
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG KS L HMR H+GE+P
Sbjct: 9 GEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.041
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C C +SSKS L+ H+ +H+G KP
Sbjct: 14 GCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.100
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
C+ CG F++K L HM TH+G K
Sbjct: 14 GCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.16
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P+ C CGK F S+ +L+ H R H G K
Sbjct: 6 SGAGEKPYGCSECGKAFSSKSYLIIHM-RTHSGEK 39
Score = 29.4 bits (67), Expect = 0.82
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K + C CG F S++++ HM +H+G K S
Sbjct: 4 GSSGAGEKP-----YGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 27.5 bits (62), Expect = 3.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K + C+ C K + S+ L H+ H+GEK
Sbjct: 11 KPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 27.1 bits (61), Expect = 6.1
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ G K Y C C +SS +L H H
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35
Score = 26.7 bits (60), Expect = 8.5
Identities = 8/32 (25%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K C CGK+F+ +L H
Sbjct: 1 GSSGSSGAG-EKPYGCSECGKAFSSKSYLIIH 31
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger,
dimer, protein-DNA complex, cooperativity,
transcription/DNA complex; 2.35A {Mus musculus} SCOP:
g.37.1.1 g.37.1.1
Length = 73
Score = 59.2 bits (144), Expect = 5e-11
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 1085 THTGERPYAC--EFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKH 1142
RPYAC E C F L HIR H G++PF C C ++F +RS HL H
Sbjct: 13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF-SRSD---HLTTH 68
Query: 1143 AGSH 1146
+H
Sbjct: 69 IRTH 72
Score = 56.2 bits (136), Expect = 6e-10
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 432 SNLKAHMRIHTGERPVCCHI--CGKKLR--GKLKDHMLTHTGERPFGCEVCGSTYKYKYY 487
+NL ++ RP C + C ++ +L H+ HTG++PF C +C + +
Sbjct: 7 NNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64
Query: 488 LAVHMRKHT 496
L H+R HT
Sbjct: 65 LTTHIRTHT 73
Score = 54.2 bits (131), Expect = 3e-09
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 460 LKDHMLTHTGERPFGC--EVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFN 517
L +++ RP+ C E C + L H+R HTG++P+ C C +F+
Sbjct: 9 LLNYV--VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT 66
Query: 518 LHLKRHT 524
H++ HT
Sbjct: 67 THIRTHT 73
Score = 53.8 bits (130), Expect = 3e-09
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 706 LKEHMLTHTGERPYAC--EICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFS 763
L ++ RPYAC E C F L H+R H G++P+ C C ++F+ +
Sbjct: 9 LLNYV--VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT 66
Query: 764 LHLKKH 769
H++ H
Sbjct: 67 THIRTH 72
Score = 53.1 bits (128), Expect = 6e-09
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 1256 LKTHMLIHANNRVFTC--EVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLN 1313
L +++ R + C E C + F + L H R+HTG KP+ C +C + F++ L
Sbjct: 9 LLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT 66
Query: 1314 IHRKLH 1319
H + H
Sbjct: 67 THIRTH 72
Score = 42.7 bits (101), Expect = 4e-05
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 1287 HKRVHTGYKPYACDL--CSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKF 1334
V +PYAC + C ++F++ L H ++H K F C +C F
Sbjct: 10 LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59
Score = 41.1 bits (97), Expect = 1e-04
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 680 LKEHMIVHTGERKYCCHICGKK-MR-GKLKEHMLTHT 714
L H+ +HTG++ + C IC + R L H+ THT
Sbjct: 37 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 40.0 bits (94), Expect = 4e-04
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 1241 YPCTV--CSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHT 1292
Y C V C + S L H+ IH + F C +C + F + +L H R HT
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 39.6 bits (93), Expect = 4e-04
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 582 CGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
C F+ L H+ HTG K ++C +C +S HL H H
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 36.9 bits (86), Expect = 0.003
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 1051 GNLQQHMETHSGEKKICCHICGKKL--RGRLNEHMLTHT 1087
L +H+ H+G+K C IC + L H+ THT
Sbjct: 35 DELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 36.9 bits (86), Expect = 0.004
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 294 RPHQC--KGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTS 351
RP+ C + C + F L +H R+H G K F+C C F H+ H+ +
Sbjct: 18 RPYACPVESCDRRFSRSDELTRH-IRIHTGQKP-----FQCRICMRNFSRSDHLTTHIRT 71
Query: 352 HT 353
HT
Sbjct: 72 HT 73
Score = 36.5 bits (85), Expect = 0.005
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 20 CAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
C R+S +L H+ HTG KP+ C IC ++ + L H++ H
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 33.4 bits (77), Expect = 0.068
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 1650 PHTCPV--CKKIFVNKFNLTTHKKLHLPMNRNHQCDTCGKSFTGNNHLKRHI 1699
P+ CPV C + F LT H ++H + QC C ++F+ ++HL HI
Sbjct: 19 PYACPVESCDRRFSRSDELTRHIRIHT-GQKPFQCRICMRNFSRSDHLTTHI 69
Score = 33.0 bits (76), Expect = 0.096
Identities = 20/102 (19%), Positives = 33/102 (32%), Gaps = 40/102 (39%)
Query: 1105 SYLRIHIRKHNGERPFTCS--ECGQSFAARSAFSLHLKKHAGSHILRRHIGYTVFCKECN 1162
+ L ++ RP+ C C + F+ S L +H +R H G
Sbjct: 7 NNLLNYVVPK--MRPYACPVESCDRRFSR----SDELTRH-----IRIHTGQK------- 48
Query: 1163 IGFYSSTHLHSHGIKVHGLPPFICEHCSKPFTSKGNLTVHVK 1204
PF C C + F+ +LT H++
Sbjct: 49 --------------------PFQCRICMRNFSRSDHLTTHIR 70
Score = 33.0 bits (76), Expect = 0.10
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 1794 PHTCPV--CKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHI 1843
P+ CPV C + F L H +IH K QC +C ++F+R+ HL +HI
Sbjct: 19 PYACPVESCDRRFSRSDELTRHIRIHTGQ-KPFQCRICMRNFSRSDHLTTHI 69
Score = 32.7 bits (75), Expect = 0.12
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 335 CGAKFISRTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNH 380
C +F + H+ HTG K C IC ++ + L H + H
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 32.7 bits (75), Expect = 0.14
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
Query: 22 MRYSSKSQLLDHLNSHTGLKPYICHI--CKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQ 79
M + LL+++ ++PY C + C + + L RH++ H TG + +Q
Sbjct: 1 MEPHPMNNLLNYV--VPKMRPYACPVESCDRRFSRSDELTRHIRIH---TG----QKPFQ 51
Query: 80 CDICSKMFIEHHAMVKHR 97
C IC + F + H
Sbjct: 52 CRICMRNFSRSDHLTTHI 69
Score = 32.3 bits (74), Expect = 0.18
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Query: 201 LEDHINNHTGEKGHICEICNRDFYSDAMLKRHLVKHSR 238
L HI HTG+K C IC R+F HL H R
Sbjct: 37 LTRHIRIHTGQKPFQCRICMRNF----SRSDHLTTHIR 70
Score = 31.9 bits (73), Expect = 0.27
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 9/59 (15%)
Query: 975 KKFKCDV--CGNGYTSVKHLKRHKIKHMKESGELPPSMIHKCPTCYKIFTENHALKKHL 1031
+ + C V C ++ L RH H +G+ P +C C + F+ + L H+
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIRIH---TGQKP----FQCRICMRNFSRSDHLTTHI 69
Score = 30.7 bits (70), Expect = 0.65
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 957 PKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKH 999
C++ FS + +H+R K F+C +C ++ HL H H
Sbjct: 25 ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 30.4 bits (69), Expect = 0.72
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 285 HIREVHSKVRPHQCKGCGKYFKSQRHLVQHERR 317
HIR +H+ +P QC+ C + F HL H R
Sbjct: 40 HIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRT 71
Score = 30.0 bits (68), Expect = 1.1
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 153 KCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHT 209
CP E C +RF+ + +H + +H G K F+C C + + L HI HT
Sbjct: 21 ACPVESCDRRFSRSDELTRHIR-IHTGQ---KPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 30.0 bits (68), Expect = 1.1
Identities = 16/64 (25%), Positives = 27/64 (42%)
Query: 1610 LVKHKSRHIKEYTVFCKKCQLGFLSKNELNVHNIKQHDAQPHTCPVCKKIFVNKFNLTTH 1669
L+ + ++ Y + C F +EL H +P C +C + F +LTTH
Sbjct: 9 LLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH 68
Query: 1670 KKLH 1673
+ H
Sbjct: 69 IRTH 72
Score = 29.2 bits (66), Expect = 2.1
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 1167 SSTHLHSHGIKVHGLPPFIC--EHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFK 1224
+L ++ + + P+ C E C + F+ LT H++ + + F+C IC++ F+
Sbjct: 5 PMNNLLNYVVP--KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRS 62
Query: 1225 TSYKRHLKQH 1234
H++ H
Sbjct: 63 DHLTTHIRTH 72
Score = 28.4 bits (64), Expect = 3.5
Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 15/66 (22%)
Query: 1824 CQCDVCGKSFARTFHLKSHISSVHLKREQRKKHERKDHETQGLFSCDLCSYTSTQKYYLV 1883
C + C + F+R+ L HI H Q F C +C ++ +L
Sbjct: 22 CPVESCDRRFSRSDELTRHIRI---------------HTGQKPFQCRICMRNFSRSDHLT 66
Query: 1884 KHKSRH 1889
H H
Sbjct: 67 THIRTH 72
Score = 28.4 bits (64), Expect = 4.6
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 888 LRDHISAHLGIKPYCCIFCEEKYFSKKSLKRHEAKH 923
L HI H G KP+ C C + L H H
Sbjct: 37 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 57.9 bits (141), Expect = 6e-11
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSE 1124
+ TG+RPY C CG +FK KS L H R H GE+P S
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS 45
Score = 56.8 bits (138), Expect = 2e-10
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSE 751
+ TG+RPY C CG FKTK L H R H GE+P S
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS 45
Score = 55.6 bits (135), Expect = 4e-10
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TG+RP+ C CG +K K L H R HTGE+P +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 1e-07
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG +PY C C K F KS+L HR+ H
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35
Score = 46.0 bits (110), Expect = 1e-06
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ R + C CGK F K L H+R HTG KP
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 44.5 bits (106), Expect = 4e-06
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TG+R Y C CGK K + L H +HTGE+P
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 43.7 bits (104), Expect = 8e-06
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G G+RPY C ECG++F +S+ H + H G K
Sbjct: 1 GSSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 41.4 bits (98), Expect = 5e-05
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TG+RPY C CG +F + + H + HT
Sbjct: 1 GSSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHT 36
Score = 41.4 bits (98), Expect = 5e-05
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYAC 1094
+ +G++ C CGK + + L H +HTGE+P
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
G+RP+ C ECG++F +S+ H + H G
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG 37
Score = 36.0 bits (84), Expect = 0.004
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G + Y C CG + KS+L H R HTGE+P
Sbjct: 9 GQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.040
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C + +KS L+ H SHTG KP
Sbjct: 14 ECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.066
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC CG F TK +L H +HTG K
Sbjct: 14 ECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.12
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ RP++C CGK FK++ L+ H RR H G K
Sbjct: 6 SGTGQRPYECIECGKAFKTKSSLICH-RRSHTGEK 39
Score = 29.0 bits (66), Expect = 1.1
Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G + +EC CG F +++ + H SHTG K S
Sbjct: 2 SS-GSSGTGQRP-----YECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 3.9
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 171 QHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
G ++ +EC C K + ++ L H +HTGEK
Sbjct: 2 SSGSS-GTG---QRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 57.9 bits (141), Expect = 6e-11
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 466 THTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+GE+PFGC C + K YL VH + H E+P +
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 57.5 bits (140), Expect = 9e-11
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 1085 THTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+GE+P+ C C +F KSYL +H + H E+P S
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 56.0 bits (136), Expect = 3e-10
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 712 THTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+GE+P+ C C F +K YL VH + H E+P S
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 46.4 bits (111), Expect = 7e-07
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 1269 FTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
F C C K F K YL H++ H KP
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 44.4 bits (106), Expect = 4e-06
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 686 VHTGERKYCCHICGKKMRGK--LKEHMLTHTGERPYAC 721
+GE+ + C C K K L H TH E+P
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 43.7 bits (104), Expect = 8e-06
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 439 RIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGC 475
+GE+P C C K K L H TH E+P G
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 43.3 bits (103), Expect = 9e-06
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 1288 KRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G KP+ C C K F+ KS L +H++ H
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33
Score = 41.0 bits (97), Expect = 7e-05
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1059 THSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
SGEK C C K + L H TH E+P
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 40.6 bits (96), Expect = 8e-05
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 741 HNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
+GE+P+ CS C ++F+++S +H + HA K
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 39.1 bits (92), Expect = 3e-04
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 1114 HNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GE+PF CS C ++F+++S +H + HA
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE 35
Score = 36.4 bits (85), Expect = 0.003
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 495 HTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GE+P+ C+ C +F+++ +H + H
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHA 34
Score = 36.0 bits (84), Expect = 0.003
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K + C C KS L H + H E+P
Sbjct: 7 GEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 35.6 bits (83), Expect = 0.005
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C C +SSKS LL H +H KP
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 33.3 bits (77), Expect = 0.035
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
C+ C F++K L H TH K
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 32.5 bits (75), Expect = 0.059
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S +P C C K F S+ +L+ H+ + H K
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQ-QTHAEEK 37
Score = 29.0 bits (66), Expect = 1.0
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
F C C F S++++ H +H K S
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 27.9 bits (63), Expect = 3.3
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K F C+ C K + S+ L H H EK
Sbjct: 9 KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 27.9 bits (63), Expect = 3.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
PF C C K F+SK L VH
Sbjct: 10 PFGCSCCEKAFSSKSYLLVH 29
Score = 26.3 bits (59), Expect = 10.0
Identities = 9/35 (25%), Positives = 10/35 (28%), Gaps = 2/35 (5%)
Query: 663 GNKYHSCKVCGA--EIKGSLKEHMIVHTGERKYCC 695
G K C C K L H H E+
Sbjct: 7 GEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.5 bits (140), Expect = 8e-11
Identities = 21/42 (50%), Positives = 24/42 (57%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG SF KS LRIH + H GER S
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 55.2 bits (134), Expect = 6e-10
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG ++ +K L +H + HTGER +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 54.5 bits (132), Expect = 1e-09
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG +F K L +H + H GER S
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 49.5 bits (119), Expect = 7e-08
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C C K FT KS L IH+K H
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35
Score = 47.5 bits (114), Expect = 3e-07
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F K L H++ HTG +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 44.4 bits (106), Expect = 4e-06
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY CS+CG+SF +S +H K H G +
Sbjct: 1 GSSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER 39
Score = 43.7 bits (104), Expect = 7e-06
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE+ Y C CGK + +L+ H HTGER
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 41.0 bits (97), Expect = 7e-05
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ +GEK C CGK + RL H HTGER
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 41.0 bits (97), Expect = 8e-05
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C+ CG SF + +H K HT
Sbjct: 1 GSSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHT 36
Score = 39.4 bits (93), Expect = 2e-04
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ CS+CG+SF +S +H K H G
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG 37
Score = 36.7 bits (86), Expect = 0.002
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG KS L+ H + HTGER
Sbjct: 9 GEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 31.0 bits (71), Expect = 0.24
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C+ CG F K L+ H HTG +
Sbjct: 14 KCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 30.6 bits (70), Expect = 0.32
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C ++ KS+L H HTG +
Sbjct: 14 KCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 29.4 bits (67), Expect = 0.95
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F + L H+ + H G +
Sbjct: 6 SGTGEKPYKCSDCGKSFTWKSRLRIHQ-KCHTGER 39
Score = 28.7 bits (65), Expect = 1.6
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC C ++ L+ H+ H
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35
Score = 28.3 bits (64), Expect = 2.1
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 5/45 (11%)
Query: 317 RVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F ++ + H HTG ++ S
Sbjct: 5 SSGTGEKP-----YKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 27.1 bits (61), Expect = 5.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
P+ C C K FT K L +H
Sbjct: 12 PYKCSDCGKSFTWKSRLRIH 31
Score = 27.1 bits (61), Expect = 6.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K ++C+ C K++ + L H HTGE+
Sbjct: 11 KPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.5 bits (140), Expect = 9e-11
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ +GE+P+GC CG T+ K L+ H R HTGE+P +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 57.5 bits (140), Expect = 1e-10
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSE 1124
+ +GE+PY C CG +F KS L H R H GE+P S
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS 45
Score = 57.2 bits (139), Expect = 1e-10
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSE 751
+ +GE+PY C CG TF K L H R H GE+P S
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS 45
Score = 48.3 bits (116), Expect = 2e-07
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G KPY C+ C K F+QKS L+ H++ H
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35
Score = 47.5 bits (114), Expect = 4e-07
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + + C CGK F QK L H+R HTG KP
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 1e-06
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +GE+PY C+ECG++F+ +S S H + H G K
Sbjct: 1 GSSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEK 39
Score = 44.1 bits (105), Expect = 5e-06
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
+GE+ Y C+ CGK + L H THTGE+P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 41.4 bits (98), Expect = 4e-05
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYACE 1095
+ SGEK C+ CGK + L+ H THTGE+P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 41.4 bits (98), Expect = 5e-05
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 490 VHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GE+PY CN CG +F+ + + H + HT
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHT 36
Score = 40.6 bits (96), Expect = 1e-04
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 1109 IHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GE+P+ C+ECG++F+ +S S H + H G
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG 37
Score = 36.4 bits (85), Expect = 0.003
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG KS L AH R HTGE+P
Sbjct: 9 GEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.032
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
CN CG F+ K L H THTG K
Sbjct: 14 GCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.078
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C+ C +S KS L H +HTG KP
Sbjct: 14 GCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.67
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S +P+ C CGK F + L H +R H G K
Sbjct: 6 SGSGEKPYGCNECGKTFSQKSILSAH-QRTHTGEK 39
Score = 29.0 bits (66), Expect = 1.3
Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K + C CG F ++ ++ H +HTG K S
Sbjct: 4 GSSGSGEKP-----YGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 7.3
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ +G K Y C+ C +S L H+ H
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35
Score = 26.7 bits (60), Expect = 8.3
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K + C C KT+ + L H HTGEK
Sbjct: 11 KPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 57.5 bits (140), Expect = 1e-10
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ +GERPF C CG + + +LA H+R H+ E+ +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 55.6 bits (135), Expect = 5e-10
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ +GERP+ C CG F +S+L H+R H+ E+ S
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 53.3 bits (129), Expect = 3e-09
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ +GERP+ C CG F + +L H+R H+ E+ S
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 48.7 bits (117), Expect = 1e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + R F C CGKGF ++ +L H R+H+ K
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 46.4 bits (111), Expect = 9e-07
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G +P+ C+ C K F ++S L H +LH
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
+GER + C+ CGK R L H+ H+ E+
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +GERP+ C+ECG+ F RS + HL+ H+ K
Sbjct: 1 GSSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREK 39
Score = 39.4 bits (93), Expect = 2e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ SGE+ C+ CGK R L H+ H+ E+
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 39.1 bits (92), Expect = 4e-04
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GERP+ CN CG F R HL+ H+
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHS 36
Score = 38.7 bits (91), Expect = 4e-04
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GERPF C+ECG+ F RS + HL+ H+
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR 37
Score = 36.7 bits (86), Expect = 0.003
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G++ + C CG +S+L H+R+H+ E+
Sbjct: 9 GERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 33.3 bits (77), Expect = 0.043
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S RP +C CGK F + HL H R+H K
Sbjct: 6 SGSGERPFKCNECGKGFGRRSHLAGHL-RLHSREK 39
Score = 32.1 bits (74), Expect = 0.11
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C+ C + +S L HL H+ K
Sbjct: 14 KCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 31.0 bits (71), Expect = 0.22
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+CN CG F + L H+ H+ K
Sbjct: 14 KCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 30.2 bits (69), Expect = 0.40
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
F+C CG F R+H+A H+ H+ K+ S
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 30.2 bits (69), Expect = 0.49
Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ +G + +KC+ C G+ HL H H
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35
Score = 27.5 bits (62), Expect = 4.1
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
+ F+C C K + R L H+ H+ EK
Sbjct: 11 RPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 27.5 bits (62), Expect = 4.6
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+S +G +P+ C+ C + L HL+ H
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35
Score = 26.7 bits (60), Expect = 8.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 1682 CDTCGKSFTGNNHLKRH 1698
C+ CGK F +HL H
Sbjct: 15 CNECGKGFGRRSHLAGH 31
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 115
Score = 59.8 bits (144), Expect = 1e-10
Identities = 21/100 (21%), Positives = 32/100 (32%), Gaps = 7/100 (7%)
Query: 432 SNLKAHMRIHTGERPVCCHICGKKLR--GKLKDHM-----LTHTGERPFGCEVCGSTYKY 484
S+ K + I TG C C +L HM +
Sbjct: 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64
Query: 485 KYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
K L K ++ C YCGHSF + ++H+ +
Sbjct: 65 KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 57.5 bits (138), Expect = 6e-10
Identities = 21/105 (20%), Positives = 35/105 (33%), Gaps = 7/105 (6%)
Query: 679 SLKEHMIVHTGERKYCCHICGKKMR--GKLKEHM-----LTHTGERPYACEICGGTFKTK 731
S K + + TG K+ C C +L HM + K
Sbjct: 6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65
Query: 732 WYLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTI 776
L K + ++ C CG SF + S+H+ K +++
Sbjct: 66 RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVS 110
Score = 57.1 bits (137), Expect = 8e-10
Identities = 20/107 (18%), Positives = 30/107 (28%), Gaps = 9/107 (8%)
Query: 1052 NLQQHMETHSGEKKICCHICGKKLR--GRLNEHM-----LTHTGERPYACEFCGSSFKDK 1104
+ + + +G K C C L HM S K
Sbjct: 6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65
Query: 1105 SYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKK--HAGSHILR 1149
L K + ++ C CG SF + S+H+ K H
Sbjct: 66 RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112
Score = 55.2 bits (132), Expect = 5e-09
Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 3/98 (3%)
Query: 1105 SYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIGYTVFCKECNIG 1164
S +++ G F C +C ++ ++H+ + + R T
Sbjct: 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE---TGHYRDDNHETDNNNPKRWS 61
Query: 1165 FYSSTHLHSHGIKVHGLPPFICEHCSKPFTSKGNLTVH 1202
L K C +C F S +L+VH
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 51.3 bits (122), Expect = 1e-07
Identities = 20/129 (15%), Positives = 32/129 (24%), Gaps = 24/129 (18%)
Query: 1167 SSTHLHSHGIKVHGLPPFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTS 1226
S + +G G F C+ CS + + LTVH+ + +
Sbjct: 3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYR-DDNHET--------- 52
Query: 1227 YKRHLKQHDDSVTYYPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEE 1286
+ L +V C CG F + L
Sbjct: 53 --------------DNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSV 98
Query: 1287 HKRVHTGYK 1295
H Y+
Sbjct: 99 HMIKTKHYQ 107
Score = 48.2 bits (114), Expect = 1e-06
Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 6/85 (7%)
Query: 706 LKEHMLTHTGERPYACEICGGTFKTKWYLGVHMR-----KHNGERPYMCSECGQSFAARS 760
K + TG + C+ C + T L VHM + + + S +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66
Query: 761 AFSLHLKKHAGFKQTIECEYCHNTF 785
+ K ++ ++C YC ++F
Sbjct: 67 SLLEMEGKEDA-QKVLKCMYCGHSF 90
Score = 47.8 bits (113), Expect = 2e-06
Identities = 13/99 (13%), Positives = 34/99 (34%), Gaps = 1/99 (1%)
Query: 734 LGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFTFETGLMG 793
++ G + C +C ++ ++H+ + ++ +N +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66
Query: 794 VVTRDEWEILLRDKVRICPKCNKEFYSDRTMRRHLKQVH 832
+ E + + KV C C F S + + H+ +
Sbjct: 67 SLLEMEGKEDAQ-KVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 45.5 bits (107), Expect = 1e-05
Identities = 17/80 (21%), Positives = 24/80 (30%), Gaps = 5/80 (6%)
Query: 1241 YPCTVCSKNLSSPYRLKTHMLI-----HANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYK 1295
+ C CS + L HM N+ +KR L E + K
Sbjct: 20 FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK 79
Query: 1296 PYACDLCSKQFTQKSTLNIH 1315
C C F L++H
Sbjct: 80 VLKCMYCGHSFESLQDLSVH 99
Score = 45.5 bits (107), Expect = 1e-05
Identities = 21/84 (25%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Query: 575 QKIECNICGALFATKYTLQDHMNTHTGNKYKCDVCDNGYSSLKHLKRHKMKHLQENGELP 634
K C C A + T L HMN + DN R + E E
Sbjct: 18 SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKE-D 76
Query: 635 PSKIQKCPICHKIFIRNYMLRKHL 658
K+ KC C F L H+
Sbjct: 77 AQKVLKCMYCGHSFESLQDLSVHM 100
Score = 45.1 bits (106), Expect = 1e-05
Identities = 18/103 (17%), Positives = 28/103 (27%), Gaps = 5/103 (4%)
Query: 1251 SSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRV-----HTGYKPYACDLCSKQ 1305
SS K + I F C+ C + L H ++ +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 1306 FTQKSTLNIHRKLHLNIKDFICDLCGAKFYEFNTYVTHVHETH 1348
+K +L K C CG F H+ +T
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 45.1 bits (106), Expect = 1e-05
Identities = 20/99 (20%), Positives = 30/99 (30%), Gaps = 5/99 (5%)
Query: 590 YTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIF 648
+ + + + TG ++C C Y +L L H M + +
Sbjct: 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVH-MNETGHYRD-DNHETDNNNPKRWSK 62
Query: 649 IRNYMLRKHLDFVHGNKYHSCKVCGA--EIKGSLKEHMI 685
R L + K C CG E L HMI
Sbjct: 63 PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101
Score = 45.1 bits (106), Expect = 2e-05
Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 1/105 (0%)
Query: 144 YRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKVV-HMGIKQKKKFECAHCSKTYLSRVGLE 202
Y + K C+ C ++++ + H H + + + L
Sbjct: 10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69
Query: 203 DHINNHTGEKGHICEICNRDFYSDAMLKRHLVKHSRMIKETSEEF 247
+ +K C C F S L H++K K +
Sbjct: 70 EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSS 114
Score = 44.4 bits (104), Expect = 3e-05
Identities = 17/109 (15%), Positives = 37/109 (33%), Gaps = 15/109 (13%)
Query: 488 LAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHTERGDVRHIECQHSLKIIEYKIYQ 547
++ TG + C C ++ +H+ D H ++ K
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPK-------- 58
Query: 548 WISIENWFKIKRENVPSTKDQSHKKRDQKIECNICGALFATKYTLQDHM 596
W K ++ ++ + + ++ ++C CG F + L HM
Sbjct: 59 -----RWSKPRKRSLLEMEGKEDAQKV--LKCMYCGHSFESLQDLSVHM 100
Score = 42.8 bits (100), Expect = 9e-05
Identities = 17/119 (14%), Positives = 34/119 (28%), Gaps = 25/119 (21%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKL--HLNIKDFICDLCGAKFYEF-NTYVTH 1343
+ + TG + C CS + L +H H + D K +
Sbjct: 10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69
Query: 1344 VHETHAILPRVIVTKFKVEDFQFFVCESMQSAKSTCVLCKKVFSTRENCTNHIMECHSY 1402
E +V+ C+ C F + ++ + H+++ Y
Sbjct: 70 EMEGKEDAQKVL----------------------KCMYCGHSFESLQDLSVHMIKTKHY 106
Score = 42.8 bits (100), Expect = 9e-05
Identities = 13/99 (13%), Positives = 28/99 (28%), Gaps = 2/99 (2%)
Query: 278 SAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGA 337
S +L+ + + +CK C + + L H + H
Sbjct: 3 SGSSGKLYGS-IFTGASKFRCKDCSAAYDTLVELTVHMNETG-HYRDDNHETDNNNPKRW 60
Query: 338 KFISRTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRH 376
+ + + K C C ++ + + L H
Sbjct: 61 SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 42.1 bits (98), Expect = 2e-04
Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 5/83 (6%)
Query: 460 LKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMR-----KHTGERPYVCNYCGHSFAARP 514
K + TG F C+ C + Y L VHM + N S +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66
Query: 515 AFNLHLKRHTERGDVRHIECQHS 537
+ + + ++ + C HS
Sbjct: 67 SLLEMEGKEDAQKVLKCMYCGHS 89
Score = 41.3 bits (96), Expect = 3e-04
Identities = 12/99 (12%), Positives = 32/99 (32%), Gaps = 3/99 (3%)
Query: 1665 NLTTHKKLHLPMNRNHQCDTCGKSFTGNNHLKRHIYSVHLKRDTKFPCRLCSQEFDTKEQ 1724
+ + + ++ +C C ++ L H+ RD + + +K +
Sbjct: 6 SGKLYGSIFTGASK-FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64
Query: 1725 RKKHER--KDHETQGLFSCDLCSYTSTQKYYLVKHKSRH 1761
++ + Q + C C ++ L H +
Sbjct: 65 KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT 103
Score = 41.3 bits (96), Expect = 4e-04
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Query: 1561 TSDTKFPCRLCSQEFGTKKQRKKHERKDHETRGV----FSCDLCSYTSTRKYYLVKHKSR 1616
T +KF C+ CS + T + H + R + + ++ RK L++ + +
Sbjct: 15 TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGK 74
Query: 1617 HIKEYTVFCKKCQLGFLSKNELNVHNIKQH 1646
+ + C C F S +L+VH IK
Sbjct: 75 EDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 39.0 bits (90), Expect = 0.002
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 1708 TKFPCRLCSQEFDTKEQRKKHERKDHETQGL----FSCDLCSYTSTQKYYLVKHKSRHIK 1763
+KF C+ CS +DT + H + + + + ++ +K L++ + +
Sbjct: 18 SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDA 77
Query: 1764 DYNVFCKICQLGFLSKNELDVHNIKQH 1790
+ C C F S +L VH IK
Sbjct: 78 QKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 38.6 bits (89), Expect = 0.003
Identities = 22/107 (20%), Positives = 34/107 (31%), Gaps = 11/107 (10%)
Query: 307 SQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHM--TSHTGIKNHVCSICQ 364
S + + G K F C C A + + + HM T H NH
Sbjct: 2 SSGSSGKLYGSIFTGASK-----FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNN 56
Query: 365 STYTTARGLKRHNKNHLREAGVLRADEMYKCDKCDKLFIEQSEMVQH 411
+ K ++ L G A ++ KC C F ++ H
Sbjct: 57 PKRWS----KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 37.8 bits (87), Expect = 0.006
Identities = 13/92 (14%), Positives = 27/92 (29%), Gaps = 2/92 (2%)
Query: 268 TCPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKH 327
C C Y + + +H+ E + + + + K+
Sbjct: 21 RCKDCSAAYDTLVELTVHMNETGHY--RDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ 78
Query: 328 SNFECFHCGAKFISRTHIADHMTSHTGIKNHV 359
+C +CG F S ++ HM +
Sbjct: 79 KVLKCMYCGHSFESLQDLSVHMIKTKHYQKVS 110
Score = 37.4 bits (86), Expect = 0.006
Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 8/103 (7%)
Query: 341 SRTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRHNK--NHLREAGVLRADEMYKCDKC 398
S + + + TG C C + Y T L H H R+ E +
Sbjct: 3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDN----HETDNNNPK 58
Query: 399 DKLFIEQSEMVQHRDWVHGDKCYLCKICGA--RVKSNLKAHMR 439
+ +++ K C CG +L HM
Sbjct: 59 RWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101
Score = 37.4 bits (86), Expect = 0.007
Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 2/96 (2%)
Query: 829 KQVHIEIKTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHYCGITKNNKTLL 888
+ F C++C + T +L H N G ++ + +K K L
Sbjct: 11 GSIFTGASKFRCKDCSAAYDTLVELTVHMN--ETGHYRDDNHETDNNNPKRWSKPRKRSL 68
Query: 889 RDHISAHLGIKPYCCIFCEEKYFSKKSLKRHEAKHN 924
+ K C++C + S + L H K
Sbjct: 69 LEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 37.4 bits (86), Expect = 0.007
Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 11/110 (10%)
Query: 1809 TLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHISSVHLKREQRKKHERKDHETQGLFS 1868
+ + I +C C ++ L H++ R+ + +
Sbjct: 6 SGKLYGSIFTG-ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDN---------- 54
Query: 1869 CDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELDVHNIKQH 1918
+ ++ +K L++ + + + C C F S +L VH IK
Sbjct: 55 NNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 37.1 bits (85), Expect = 0.011
Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 6/91 (6%)
Query: 1613 HKSRHIKEYTVFCKKCQLGFLSKNELNVH-NIKQH----DAQPHTCPVCKKIFVNKFNLT 1667
+ S CK C + + EL VH N H + + + K +L
Sbjct: 10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69
Query: 1668 THKKLHLPMNRNHQCDTCGKSFTGNNHLKRH 1698
+ + +C CG SF L H
Sbjct: 70 EMEGKEDA-QKVLKCMYCGHSFESLQDLSVH 99
Score = 36.7 bits (84), Expect = 0.012
Identities = 16/105 (15%), Positives = 26/105 (24%), Gaps = 2/105 (1%)
Query: 1634 SKNELNVHNIKQHDAQPHTCPVCKKIFVNKFNLTTH-KKLHLPMNRNHQCDTCGKSFTG- 1691
S + ++ A C C + LT H + + NH+ D
Sbjct: 3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62
Query: 1692 NNHLKRHIYSVHLKRDTKFPCRLCSQEFDTKEQRKKHERKDHETQ 1736
C C F++ + H K Q
Sbjct: 63 PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ 107
Score = 36.7 bits (84), Expect = 0.014
Identities = 22/120 (18%), Positives = 34/120 (28%), Gaps = 23/120 (19%)
Query: 25 SSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICS 84
SS S + + TG + C C +Y L HM TG
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDT----LVELTVHMNETGHYR----DDNHETD 53
Query: 85 KMFIEHHAMVKHRD-WLHAIHFRSEKNLTSEEWRQLVIKNARKCPICGDRYKSGTDMRRH 143
+ + + R ++K L C CG ++S D+ H
Sbjct: 54 NNNPKRWSKPRKRSLLEMEGKEDAQKVLK--------------CMYCGHSFESLQDLSVH 99
Score = 35.9 bits (82), Expect = 0.021
Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 27/122 (22%)
Query: 888 LRDHISAHLGIKPYCCIFCEEKYFSKKSLKRHEAKHNKVYNKAQYQDYQIQDLSMDQYRE 947
+ + S G + C C Y + L H ++ +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVH--------------------MNETGHYR 46
Query: 948 LVQSKERKCPKCEKEFSTPRYMRKH-----LRKKFKCDVCGNGYTSVKHLKRH--KIKHM 1000
+ R + + +K KC CG+ + S++ L H K KH
Sbjct: 47 DDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY 106
Query: 1001 KE 1002
++
Sbjct: 107 QK 108
Score = 35.9 bits (82), Expect = 0.026
Identities = 18/117 (15%), Positives = 33/117 (28%), Gaps = 18/117 (15%)
Query: 987 TSVKHLKRHKIKHMKESGELPPSMIHKCPTCYKIFTENHALKKHLDWVH--GNKCHICKV 1044
+S K + S +C C + L H++ + H
Sbjct: 2 SSGSSGKLYGSIFTGAS-------KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDN 54
Query: 1045 CGAKIKG-----NLQQHMETHSGEKKICCHICGK--KLRGRLNEHML--THTGERPY 1092
K +L + +K + C CG + L+ HM+ H +
Sbjct: 55 NNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111
Score = 35.1 bits (80), Expect = 0.039
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 11/92 (11%)
Query: 393 YKCDKCDKLFIEQSEMVQHRDWVH-----GDKCYLCKICGAR--VKSNLKAHMRIHTGER 445
++C C + E+ H + + K +L ++
Sbjct: 20 FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK 79
Query: 446 PVCCHICGK--KLRGKLKDHML--THTGERPF 473
+ C CG + L HM+ H +
Sbjct: 80 VLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111
Score = 35.1 bits (80), Expect = 0.050
Identities = 24/127 (18%), Positives = 41/127 (32%), Gaps = 22/127 (17%)
Query: 176 VHMGIKQ-KKKFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAMLKRHLV 234
++ I KF C CS Y + V L H+N TG + + R
Sbjct: 9 LYGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPRKRS 67
Query: 235 KHSRMIKETSEEFVETGSITREEWYKMVLQRVKTCPLCKKTYQSAKGMRLH-IREVHSKV 293
KE ++ +V C C +++S + + +H I+ H +
Sbjct: 68 LLEMEGKEDAQ-------------------KVLKCMYCGHSFESLQDLSVHMIKTKHYQK 108
Query: 294 RPHQCKG 300
G
Sbjct: 109 VSGPSSG 115
Score = 34.0 bits (77), Expect = 0.11
Identities = 17/100 (17%), Positives = 24/100 (24%), Gaps = 7/100 (7%)
Query: 1576 GTKKQRKKHERKDHETRGVFSCDLCSYTSTRKYYLVKHKSRHIKEYTVFCKKCQLGFLS- 1634
G+ K F C CS L H Y +
Sbjct: 1 GSSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHM-NETGHYRDDNHETDNNNPKR 59
Query: 1635 -----KNELNVHNIKQHDAQPHTCPVCKKIFVNKFNLTTH 1669
K L K+ + C C F + +L+ H
Sbjct: 60 WSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 32.0 bits (72), Expect = 0.52
Identities = 13/89 (14%), Positives = 27/89 (30%), Gaps = 2/89 (2%)
Query: 126 KCPICGDRYKSGTDMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKK 185
+C C Y + ++ H + K K+ + +K
Sbjct: 21 RCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV 80
Query: 186 FECAHCSKTYLSRVGLEDHI--NNHTGEK 212
+C +C ++ S L H+ H +
Sbjct: 81 LKCMYCGHSFESLQDLSVHMIKTKHYQKV 109
Score = 28.6 bits (63), Expect = 7.4
Identities = 17/114 (14%), Positives = 29/114 (25%), Gaps = 15/114 (13%)
Query: 1778 SKNELDVHNIKQHDAQPHTCPVCKKIFVNKVTLAAHKKI--HLPIDKNCQCDVCGKSFAR 1835
S + ++ A C C + V L H H D N + D
Sbjct: 3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYR-DDNHETDNNN----- 56
Query: 1836 TFHLKSHISSVHLKREQRKKHERKDHETQGLFSCDLCSYTSTQKYYLVKHKSRH 1889
R++ + Q + C C ++ L H +
Sbjct: 57 -------PKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT 103
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 56.8 bits (138), Expect = 2e-10
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P C CG + +K L +H R H ++ +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 56.8 bits (138), Expect = 2e-10
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+P C CG +F KS L +H R H ++ S
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 54.5 bits (132), Expect = 1e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+P C CG F K L +H R H ++ S
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 45.2 bits (108), Expect = 2e-06
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KP C C K F KS L +H++ H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 44.9 bits (107), Expect = 3e-06
Identities = 11/31 (35%), Positives = 12/31 (38%)
Query: 1269 FTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
C CGK F K L H+R H K
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 44.9 bits (107), Expect = 3e-06
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+P C+ECG++F +S +H + H K
Sbjct: 1 GSSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDK 39
Score = 44.1 bits (105), Expect = 6e-06
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE+ C CGK + +L H TH ++
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ +GEK C CGK + +L H TH ++
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P C+ECG++F +S +H + H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVD 37
Score = 39.1 bits (92), Expect = 3e-04
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+P C CG +F + +H + H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHV 36
Score = 36.0 bits (84), Expect = 0.005
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K C CG KS L H R H ++
Sbjct: 9 GEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 33.7 bits (78), Expect = 0.030
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C + KSQL+ H +H K
Sbjct: 14 KCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 31.4 bits (72), Expect = 0.17
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P +C CGK F + L+ H+ R H+ K
Sbjct: 7 GTGEKPCKCTECGKAFCWKSQLIMHQ-RTHVDDK 39
Score = 31.4 bits (72), Expect = 0.20
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C CG F K L H TH +K
Sbjct: 14 KCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 29.8 bits (68), Expect = 0.63
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
+C CG F ++ + H +H K+ S
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 27.9 bits (63), Expect = 3.0
Identities = 9/33 (27%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K KC C + L H+ H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 27.1 bits (61), Expect = 5.6
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+S TG KP C C ++ L H + H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 27.1 bits (61), Expect = 5.7
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K +C C K + + L H H +K
Sbjct: 11 KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 26.8 bits (60), Expect = 7.2
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
P C C K F K L +H
Sbjct: 12 PCKCTECGKAFCWKSQLIMH 31
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.7 bits (138), Expect = 2e-10
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG +F KS L IH + H GER S
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 54.8 bits (133), Expect = 9e-10
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG F K L +H + H GER S
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 54.8 bits (133), Expect = 1e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG + K L +H + HTGER +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C C K FT+KS L+IH++ H
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 47.1 bits (113), Expect = 5e-07
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F +K L H++ HTG +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 437 HMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGC 475
TGE+P C CGK K L H +HTGER G
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 43.7 bits (104), Expect = 7e-06
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY CS+CG++F +S +H + H G +
Sbjct: 1 GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER 39
Score = 43.3 bits (103), Expect = 9e-06
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGKKMRGK--LKEHMLTHTGERPYAC 721
TGE+ Y C CGK K L H +HTGER
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 41.7 bits (99), Expect = 4e-05
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYAC 1094
+ +GEK C CGK + L+ H +HTGER
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 41.0 bits (97), Expect = 6e-05
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C+ CG +F + ++H + HT
Sbjct: 1 GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHT 36
Score = 39.8 bits (94), Expect = 2e-04
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ CS+CG++F +S +H + H G
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG 37
Score = 36.3 bits (85), Expect = 0.003
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG KS L H + HTGER
Sbjct: 9 GEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 32.5 bits (75), Expect = 0.081
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C+ CG F K L H +HTG +
Sbjct: 14 KCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 31.7 bits (73), Expect = 0.13
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C ++ KS L H SHTG +
Sbjct: 14 KCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 29.0 bits (66), Expect = 1.3
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F + L H+ + H G +
Sbjct: 6 SGTGEKPYKCSDCGKAFTRKSGLHIHQ-QSHTGER 39
Score = 29.0 bits (66), Expect = 1.4
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC C ++ L H+ H
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 28.6 bits (65), Expect = 2.0
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 317 RVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F ++ + H SHTG ++ S
Sbjct: 5 SSGTGEKP-----YKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 27.5 bits (62), Expect = 4.7
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
P+ C C K FT K L +H
Sbjct: 12 PYKCSDCGKAFTRKSGLHIH 31
Score = 27.1 bits (61), Expect = 5.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K ++C+ C K + + GL H +HTGE+
Sbjct: 11 KPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.8 bits (138), Expect = 2e-10
Identities = 20/42 (47%), Positives = 23/42 (54%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG SF KS L +H R H GE P S
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 55.6 bits (135), Expect = 5e-10
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG +F K L VH R H GE P S
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 53.3 bits (129), Expect = 3e-09
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG ++ K L VH R HTGE P +
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 48.3 bits (116), Expect = 2e-07
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C C K F +KS L++H+++H
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35
Score = 47.2 bits (113), Expect = 5e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK FI+K L H+R+HTG P
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 46.4 bits (111), Expect = 9e-07
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGC 475
+ TGE+P C CGK K L H HTGE P G
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 44.5 bits (106), Expect = 4e-06
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE+ Y C CGK + +L H HTGE P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 44.1 bits (105), Expect = 6e-06
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY CS+CG+SF +S +H + H G
Sbjct: 1 GSSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 42.1 bits (100), Expect = 3e-05
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C+ CG SF + ++H + HT
Sbjct: 1 GSSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHT 36
Score = 41.8 bits (99), Expect = 3e-05
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYAC 1094
+ +GEK C CGK + +L+ H HTGE P
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 39.1 bits (92), Expect = 4e-04
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ CS+CG+SF +S +H + H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG 37
Score = 37.1 bits (87), Expect = 0.002
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG KS L H RIHTGE P
Sbjct: 9 GEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 33.3 bits (77), Expect = 0.043
Identities = 12/30 (40%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C + KSQL H HTG P
Sbjct: 14 ECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 31.4 bits (72), Expect = 0.18
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F + L H+ R+H G
Sbjct: 6 SGTGEKPYECSDCGKSFIKKSQLHVHQ-RIHTGEN 39
Score = 31.0 bits (71), Expect = 0.24
Identities = 11/30 (36%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC+ CG F K L H HTG
Sbjct: 14 ECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 31.0 bits (71), Expect = 0.28
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K +EC CG FI ++ + H HTG S
Sbjct: 2 SSGS-SGTGEKP-----YECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 27.5 bits (62), Expect = 5.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K +EC+ C K+++ + L H HTGE
Sbjct: 11 KPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 27.1 bits (61), Expect = 6.2
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
P+ C C K F K L VH
Sbjct: 12 PYECSDCGKSFIKKSQLHVH 31
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.8 bits (138), Expect = 2e-10
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+P+ C+ CG +F L H+R H P S
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 54.1 bits (131), Expect = 1e-09
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVC 503
+ TGE+PF C+ CG + + L H+R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 53.7 bits (130), Expect = 2e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+P+ C+ CG F L H+R H P S
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 47.2 bits (113), Expect = 5e-07
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 436 AHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGC 475
+ TGE+P C CG L H+ +H P G
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 44.9 bits (107), Expect = 3e-06
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE+ + C CG L +H+ +H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 44.9 bits (107), Expect = 3e-06
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KP+ C C F+ +L H + H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 44.5 bits (106), Expect = 4e-06
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+P+ C ECG +F+ + HL+ H
Sbjct: 1 GSSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 42.2 bits (100), Expect = 3e-05
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ +GEK C CG L +H+ +H P
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 41.4 bits (98), Expect = 4e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+P+ C CG +F+ + HL+ H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHE 36
Score = 41.4 bits (98), Expect = 5e-05
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+PF C ECG +F+ + HL+ H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 41.4 bits (98), Expect = 6e-05
Identities = 10/43 (23%), Positives = 14/43 (32%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACD 1300
+ + F C+ CG F L +H R H P
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 38.7 bits (91), Expect = 5e-04
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K + CK CG +L H+R H P
Sbjct: 9 GEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 31.8 bits (73), Expect = 0.12
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C M +S L HL SH P
Sbjct: 14 QCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 30.6 bits (70), Expect = 0.29
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P QCK CG F L +H R H
Sbjct: 7 GTGEKPFQCKECGMNFSWSCSLFKHL-RSHERTD 39
Score = 30.6 bits (70), Expect = 0.30
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+S TG KP+ C C ++ + L +HL+ H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 30.2 bits (69), Expect = 0.46
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 204 HINNHTGEKGHICEICNRDFYSDAMLKRHLVKHSR 238
++ TGEK C+ C +F L +HL H R
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 29.5 bits (67), Expect = 0.94
Identities = 7/31 (22%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCD 607
+C CG F+ +L H+ +H
Sbjct: 14 QCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 29.5 bits (67), Expect = 0.98
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEK 212
K F+C C + L H+ +H
Sbjct: 11 KPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 29.5 bits (67), Expect = 1.00
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQE 629
++ TG K ++C C +S L +H H +
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERT 38
Score = 29.1 bits (66), Expect = 1.1
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 348 HMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLRE 383
+S TG K C C ++ + L +H ++H R
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERT 38
Score = 27.2 bits (61), Expect = 5.6
Identities = 10/35 (28%), Positives = 12/35 (34%), Gaps = 2/35 (5%)
Query: 663 GNKYHSCKVCGAE--IKGSLKEHMIVHTGERKYCC 695
G K CK CG SL +H+ H
Sbjct: 9 GEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 27.2 bits (61), Expect = 6.7
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
QC CG +F+ + L +H
Sbjct: 13 FQCKECGMNFSWSCSLFKH 31
Score = 26.8 bits (60), Expect = 8.5
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Query: 1036 GNKCHICKVCGA--KIKGNLQQHMETHSGEK 1064
G K CK CG +L +H+ +H
Sbjct: 9 GEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 26.8 bits (60), Expect = 8.5
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
F+C CG F + H+ SH S
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 56.7 bits (138), Expect = 2e-10
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTC 1122
+ TG +PY C CG +F+ KSYL IH R H GE +
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 54.0 bits (131), Expect = 1e-09
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVC 503
+ TG +P+ C CG ++ K YL +H R HTGE
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 53.6 bits (130), Expect = 2e-09
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMC 749
+ TG +PY C CG F++K YL +H R H GE
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 47.5 bits (114), Expect = 4e-07
Identities = 15/33 (45%), Positives = 17/33 (51%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K F KS L IH + H
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 46.3 bits (111), Expect = 9e-07
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGC 475
+ TG +P C+ CGK R K L H THTGE
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 45.9 bits (110), Expect = 1e-06
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F K YL H R HTG +
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 44.4 bits (106), Expect = 4e-06
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGKKMRGK--LKEHMLTHTGERPYAC 721
TG + Y C+ CGK R K L H THTGE +
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 43.6 bits (104), Expect = 9e-06
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G G +PY+C+ECG++F ++S +H + H G
Sbjct: 1 GSSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGES 39
Score = 42.1 bits (100), Expect = 3e-05
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TG +PYVCN CG +F ++ +H + HT
Sbjct: 1 GSSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHT 36
Score = 40.5 bits (96), Expect = 1e-04
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYAC 1094
+ +G K C+ CGK R + L H THTGE +
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 39.0 bits (92), Expect = 4e-04
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
G +P+ C+ECG++F ++S +H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG 37
Score = 37.5 bits (88), Expect = 0.001
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G K Y+C CG R KS L H R HTGE
Sbjct: 9 GMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 32.8 bits (76), Expect = 0.043
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
CN CG F +K L H THTG
Sbjct: 14 VCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 32.1 bits (74), Expect = 0.089
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C+ C + SKS L+ H +HTG
Sbjct: 14 VCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 30.9 bits (71), Expect = 0.24
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ ++P+ C CGK F+S+ +L+ H R H G
Sbjct: 6 SGTGMKPYVCNECGKAFRSKSYLIIHT-RTHTGES 39
Score = 29.0 bits (66), Expect = 1.4
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Query: 317 RVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVC 360
G+K + C CG F S++++ H +HTG
Sbjct: 5 SSGTGMKP-----YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 28.6 bits (65), Expect = 1.5
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K + C C K + S+ L H HTGE G
Sbjct: 11 KPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Length = 46
Score = 56.4 bits (137), Expect = 2e-10
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TG +P+GC C T+ K L VH R HTG +P +
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 55.6 bits (135), Expect = 5e-10
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TG +PY C C +F KS L +H R H G +P S
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 54.5 bits (132), Expect = 1e-09
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TG +PY C C TF K L VH R H G +P S
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 47.9 bits (115), Expect = 3e-07
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C C+K F+ KS L +H++ H
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 46.0 bits (110), Expect = 1e-06
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C C K F K L H+R HTG KP
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 44.1 bits (105), Expect = 5e-06
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TG + Y C C K ++ +L H +HTG +P
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G G +PY CS+C ++F+ +S +H + H G K
Sbjct: 1 GSSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 40.6 bits (96), Expect = 9e-05
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TG +PY C+ C +F+ + +H + HT
Sbjct: 1 GSSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHT 36
Score = 40.2 bits (95), Expect = 1e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ +G K C C K L+ +L H +HTG +P
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
G +P+ CS+C ++F+ +S +H + H G
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG 37
Score = 37.5 bits (88), Expect = 0.001
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G K Y C C +KS L H R HTG +P
Sbjct: 9 GVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 33.3 bits (77), Expect = 0.036
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C CA +S KSQL+ H SHTG+KP
Sbjct: 14 GCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 32.1 bits (74), Expect = 0.11
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ V+P+ C C K F + L+ H +R H GVK
Sbjct: 6 SGTGVKPYGCSQCAKTFSLKSQLIVH-QRSHTGVK 39
Score = 31.3 bits (72), Expect = 0.18
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
C+ C F+ K L H +HTG K
Sbjct: 14 GCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 29.4 bits (67), Expect = 0.91
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 5/45 (11%)
Query: 317 RVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
GVK + C C F ++ + H SHTG+K S
Sbjct: 5 SSGTGVKP-----YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 27.1 bits (61), Expect = 7.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K + C+ C+KT+ + L H +HTG K
Sbjct: 11 KPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens}
Length = 46
Score = 56.4 bits (137), Expect = 2e-10
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ G PY C C SF K L +H R H E+P S
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 55.6 bits (135), Expect = 4e-10
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ G P+ C C ++ K L VH R HT E+P +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 53.3 bits (129), Expect = 3e-09
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ G PY C C +F K L VH R H E+P S
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 45.6 bits (109), Expect = 1e-06
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
G PY C C K F+ K L +H+++H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35
Score = 45.2 bits (108), Expect = 2e-06
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ A + C C K F K L H+R+HT KP
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 43.3 bits (103), Expect = 1e-05
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G G PY CS+C +SF+ + +H + H K
Sbjct: 1 GSSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREK 39
Score = 42.1 bits (100), Expect = 2e-05
Identities = 13/41 (31%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGKKMRGK--LKEHMLTHTGERPYAC 721
G Y C C K GK L H HT E+P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ +G C C K + RL H HT E+P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 39.1 bits (92), Expect = 3e-04
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
G P+ CS+C +SF+ + +H + H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR 37
Score = 38.3 bits (90), Expect = 7e-04
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
G PY C+ C SF+ + +H + HT
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHT 36
Score = 36.4 bits (85), Expect = 0.003
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G Y C C K L H R+HT E+P
Sbjct: 9 GVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 32.1 bits (74), Expect = 0.090
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C +S K +LL H HT KP
Sbjct: 14 KCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 31.7 bits (73), Expect = 0.12
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ V P++C C K F + L+ H+ R+H K
Sbjct: 7 GAGVNPYKCSQCEKSFSGKLRLLVHQ-RMHTREK 39
Score = 30.2 bits (69), Expect = 0.41
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ G YKC C+ +S L H+ H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35
Score = 30.2 bits (69), Expect = 0.53
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C+ C F+ K L H HT K
Sbjct: 14 KCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 27.9 bits (63), Expect = 2.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
P+ C C K F+ K L VH
Sbjct: 12 PYKCSQCEKSFSGKLRLLVH 31
Score = 27.9 bits (63), Expect = 3.2
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+S G+ PY C C+ S+ L H + H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35
Score = 27.5 bits (62), Expect = 4.2
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
++C C F + + H HT K S
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 27.1 bits (61), Expect = 5.1
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
++C+ C K++ ++ L H HT EK
Sbjct: 11 NPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 26.7 bits (60), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 891 HISAHLGIKPYCCIFCEEKYFSKKS-LKRHEAKH 923
S+ G+ PY C C EK FS K L H+ H
Sbjct: 3 SGSSGAGVNPYKCSQC-EKSFSGKLRLLVHQRMH 35
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.3 bits (137), Expect = 3e-10
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+P+ C C +F KS L +H R H GE+P S
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 54.0 bits (131), Expect = 1e-09
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+P+ C C F TK L VH R H GE+P S
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 53.6 bits (130), Expect = 2e-09
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVC 503
+ TGE+PF C C + K L VH R HTGE+P
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 3e-07
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KP+ C C K F KS L +H++ H
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35
Score = 46.7 bits (112), Expect = 6e-07
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + F C C K F K L H+R HTG KP
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 45.9 bits (110), Expect = 1e-06
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKL--RGKLKDHMLTHTGERPFGCE 476
+ TGE+P C C K + L H THTGE+P G
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 43.2 bits (103), Expect = 1e-05
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ + C C K + L H THTGE+P
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 2e-05
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+P+ CSEC ++F +S +H + H G K
Sbjct: 1 GSSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEK 39
Score = 40.2 bits (95), Expect = 2e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYACE 1095
+ +GEK C C K + L H THTGE+P
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 2e-04
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+P+ C+ C +F + +H + HT
Sbjct: 1 GSSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHT 36
Score = 39.4 bits (93), Expect = 3e-04
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+PF CSEC ++F +S +H + H G
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG 37
Score = 36.3 bits (85), Expect = 0.003
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K + C C KSNL H R HTGE+P
Sbjct: 9 GEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.11
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C +++KS L+ H +HTG KP
Sbjct: 14 ECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.15
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC+ C F TK L H THTG K
Sbjct: 14 ECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.71
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P +C C K F ++ +L+ H+ R H G K
Sbjct: 6 SGTGEKPFECSECQKAFNTKSNLIVHQ-RTHTGEK 39
Score = 29.4 bits (67), Expect = 0.85
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 317 RVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K FEC C F +++++ H +HTG K S
Sbjct: 5 SSGTGEKP-----FECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 27.8 bits (63), Expect = 2.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
PF C C K F +K NL VH
Sbjct: 12 PFECSECQKAFNTKSNLIVH 31
Score = 27.1 bits (61), Expect = 7.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K FEC+ C K + ++ L H HTGEK
Sbjct: 11 KPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.4 bits (137), Expect = 3e-10
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 1081 EHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGER Y C CG +F KS L +H R H GE+P S
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 56.0 bits (136), Expect = 4e-10
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGER + C CG + K L +H R HTGE+P +
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 55.2 bits (134), Expect = 5e-10
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 708 EHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGER Y C CG F K L +H R H GE+P S
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 2e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 1286 EHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG + Y C C K F +KSTL +H+++H
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35
Score = 46.7 bits (112), Expect = 6e-07
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 437 HMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGC 475
TGER C CGK K L H HTGE+P G
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 7e-07
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ R + C CGK F +K L H+R+HTG KP
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 682 EHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGER Y C CGK + L H HTGE+P
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 44.0 bits (105), Expect = 5e-06
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GER Y CSECG++FA +S +H + H G K
Sbjct: 1 GSSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 41.3 bits (98), Expect = 6e-05
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYAC 1094
+ +GE+ C CGK + L H HTGE+P
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 40.9 bits (97), Expect = 6e-05
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGER Y C+ CG +FA + +H + HT
Sbjct: 1 GSSGSSGTGERHYECSECGKAFARKSTLIMHQRIHT 36
Score = 39.8 bits (94), Expect = 2e-04
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GER + CSECG++FA +S +H + H G
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG 37
Score = 36.3 bits (85), Expect = 0.003
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G++ Y C CG KS L H RIHTGE+P
Sbjct: 9 GERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.081
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ R ++C CGK F + L+ H +R+H G K
Sbjct: 6 SGTGERHYECSECGKAFARKSTLIMH-QRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.15
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC+ CG FA K TL H HTG K
Sbjct: 14 ECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.15
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C ++ KS L+ H HTG KP
Sbjct: 14 ECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.2
Identities = 12/49 (24%), Positives = 17/49 (34%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G + +EC CG F ++ + H HTG K S
Sbjct: 2 SS-GSSGTGERH-----YECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 3e-10
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ G++ F C C T+ L VH R HTGE+P +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 3e-09
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ G++ + C C +F S L +H R H GE+P S
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 5e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ G++ + C C TF L VH R H GE+P S
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 1e-07
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ A ++F C C K F Q L H+R+HTG KP
Sbjct: 2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 1e-07
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
G K + C+ C K FTQ S+L +H+++H
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35
Score = 42.1 bits (100), Expect = 3e-05
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
G++ + C+ C K L H HTGE+P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 4e-05
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G G++ + C+EC ++F S+ ++H + H G K
Sbjct: 1 GSSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 39.0 bits (92), Expect = 3e-04
Identities = 8/36 (22%), Positives = 15/36 (41%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
G++ + CN C +F + +H + HT
Sbjct: 1 GSSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHT 36
Score = 39.0 bits (92), Expect = 3e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYAC 1094
+ +G+K C+ C K L H HTGE+P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
G++ F C+EC ++F S+ ++H + H G
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG 37
Score = 35.6 bits (83), Expect = 0.006
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G K + C C S+L H RIHTGE+P
Sbjct: 9 GKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.17
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+CN C F +L H HTG K
Sbjct: 14 KCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.27
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ + +C C K F L H +R+H G K
Sbjct: 6 SGAGKKLFKCNECKKTFTQSSSLTVH-QRIHTGEK 39
Score = 30.6 bits (70), Expect = 0.32
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C+ C ++ S L H HTG KP
Sbjct: 14 KCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 1.7
Identities = 12/46 (26%), Positives = 15/46 (32%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K F+C C F + + H HTG K S
Sbjct: 4 GSSGAGKKL-----FKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 3.6
Identities = 7/32 (21%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ K +C+ C K+F ++ L H
Sbjct: 1 GSSGSSGAG-KKLFKCNECKKTFTQSSSLTVH 31
Score = 27.9 bits (63), Expect = 3.7
Identities = 8/33 (24%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ G K +KC+ C ++ L H+ H
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35
Score = 27.1 bits (61), Expect = 6.6
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K F+C C KT+ L H HTGEK
Sbjct: 11 KLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 3e-10
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE P+ C CG + KY L H R H GE+P +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 54.1 bits (131), Expect = 2e-09
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE PY C CG +F K L H R H GE+P S
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 53.3 bits (129), Expect = 4e-09
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE PY C CG F K+ L H R H GE+P S
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 46.0 bits (110), Expect = 1e-06
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG PY C C K F++K L H++ H
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35
Score = 46.0 bits (110), Expect = 1e-06
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + C CGK F +K L H+R H G KP
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 44.0 bits (105), Expect = 6e-06
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE Y CH CGK + +L H TH GE+P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 43.3 bits (103), Expect = 1e-05
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE PY C ECG++F+ + H + HAG K
Sbjct: 1 GSSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEK 39
Score = 41.3 bits (98), Expect = 5e-05
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE PY C+ CG +F+ + H + H
Sbjct: 1 GSSGSSGTGENPYECHECGKAFSRKYQLISHQRTHA 36
Score = 41.0 bits (97), Expect = 6e-05
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYAC 1094
+ +GE CH CGK + +L H TH GE+P
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 38.3 bits (90), Expect = 6e-04
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE P+ C ECG++F+ + H + HAG
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG 37
Score = 34.4 bits (80), Expect = 0.015
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+ Y C CG K L +H R H GE+P
Sbjct: 9 GENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.027
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
ECH C +S K QL+ H +H G KP
Sbjct: 14 ECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.072
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC+ CG F+ KY L H TH G K
Sbjct: 14 ECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.083
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ P++C CGK F + L+ H +R H G K
Sbjct: 6 SGTGENPYECHECGKAFSRKYQLISH-QRTHAGEK 39
Score = 29.8 bits (68), Expect = 0.73
Identities = 11/49 (22%), Positives = 15/49 (30%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G +EC CG F + + H +H G K S
Sbjct: 2 SSGS-SGTGENP-----YECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 27.1 bits (61), Expect = 5.6
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
+EC C K + + L H H GEK
Sbjct: 11 NPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein,
phosphorylation, polymorphism, repeat, repressor,
transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB:
2ena_A 2en4_A
Length = 46
Score = 56.0 bits (136), Expect = 3e-10
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+P+ C CG F +S L +H + H GE+P S
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 3e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+P+ C CG F + L VH + H GE+P S
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 5e-09
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 462 DHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+PF C CG + + L VH + HTGE+P +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 1e-07
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KP+ C C K F+++S LN+H KLH
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35
Score = 47.9 bits (115), Expect = 2e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + F C CGKGF ++ L H ++HTG KP
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 1e-06
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKL--RGKLKDHMLTHTGERPFGC 475
+ TGE+P C CGK R L H HTGE+P G
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 43.7 bits (104), Expect = 7e-06
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE+ + C CGK R L H HTGE+P
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 1e-05
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+P+ C ECG+ F+ RSA ++H K H G K
Sbjct: 1 GSSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 42.1 bits (100), Expect = 3e-05
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+P+ C CG F+ R A N+H K HT
Sbjct: 1 GSSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHT 36
Score = 41.0 bits (97), Expect = 6e-05
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYAC 1094
+ +GEK C CGK R LN H HTGE+P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+PF C ECG+ F+ RSA ++H K H G
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG 37
Score = 35.2 bits (82), Expect = 0.007
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K + C CG +S L H ++HTGE+P
Sbjct: 9 GEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.30
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C +S +S L H HTG KP
Sbjct: 14 KCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.37
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P +C CGK F + L H ++H G K
Sbjct: 6 SGTGEKPFKCVECGKGFSRRSALNVH-HKLHTGEK 39
Score = 30.6 bits (70), Expect = 0.40
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C CG F+ + L H HTG K
Sbjct: 14 KCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.50
Identities = 14/46 (30%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K F+C CG F R+ + H HTG K S
Sbjct: 4 GSSGTGEKP-----FKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 28.3 bits (64), Expect = 2.5
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 594 DHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K +KC C G+S L H H
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35
Score = 27.5 bits (62), Expect = 3.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K F+C C K + R L H HTGEK
Sbjct: 11 KPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 3e-10
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ GE+P+ C CG ++ Y L H HT E+P +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 53.7 bits (130), Expect = 2e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ GE+PY C CG +F + L H H E+P S
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 53.7 bits (130), Expect = 2e-09
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ GE+PY C CG SF L H H E+P S
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 47.2 bits (113), Expect = 4e-07
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F L +H HT KP
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 46.0 bits (110), Expect = 1e-06
Identities = 11/33 (33%), Positives = 12/33 (36%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
G KPY C C K F+ L H H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 44.8 bits (107), Expect = 3e-06
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGKKMRGK--LKEHMLTHTGERPYAC 721
GE+ Y C CGK G L +H +THT E+P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 42.9 bits (102), Expect = 2e-05
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY CSECG+SF+ + H H K
Sbjct: 1 GSSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 41.8 bits (99), Expect = 4e-05
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYAC 1094
+ GEK C CGK G L +H +THT E+P
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 38.7 bits (91), Expect = 5e-04
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ CSECG+SF+ + H H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR 37
Score = 37.9 bits (89), Expect = 8e-04
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
GE+PY C+ CG SF+ H HT
Sbjct: 1 GSSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHT 36
Score = 37.9 bits (89), Expect = 0.001
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG L H HT E+P
Sbjct: 9 GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 34.4 bits (80), Expect = 0.014
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+P+QC CGK F L QH H K
Sbjct: 6 SGEGEKPYQCSECGKSFSGSYRLTQH-WITHTREK 39
Score = 31.7 bits (73), Expect = 0.13
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C+ CG F+ Y L H THT K
Sbjct: 14 QCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 31.0 bits (71), Expect = 0.25
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C +S +L H +HT KP
Sbjct: 14 QCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 29.8 bits (68), Expect = 0.68
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ G K Y+C C +S L +H + H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 28.3 bits (64), Expect = 2.1
Identities = 11/46 (23%), Positives = 15/46 (32%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F + H +HT K S
Sbjct: 4 GSSGEGEKP-----YQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 26.7 bits (60), Expect = 7.1
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+S G KPY C C S+ + L +H H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 26.7 bits (60), Expect = 7.2
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 663 GNKYHSCKVCGAE--IKGSLKEHMIVHTGERKYCC 695
G K + C CG L +H I HT E+
Sbjct: 9 GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 26.7 bits (60), Expect = 7.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
+QC CGKSF+G+ L +H
Sbjct: 13 YQCSECGKSFSGSYRLTQH 31
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Length = 46
Score = 56.0 bits (136), Expect = 3e-10
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSE 1124
+ TGE+PY C+ CG SF+ S L H R H+GE+P S
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 45
Score = 54.1 bits (131), Expect = 2e-09
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSE 751
+ TGE+PY C+ CG +F+ L H R H+GE+P S
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 45
Score = 53.7 bits (130), Expect = 2e-09
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C+ CG ++++ L H R H+GE+P +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 46.8 bits (112), Expect = 6e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C+ CGK F L +H+RVH+G KP
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 46.8 bits (112), Expect = 6e-07
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFIC 1327
TG KPY C C K F S L H+++H K
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 43.7 bits (104), Expect = 8e-06
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGKKMRGK--LKEHMLTHTGERPYACE 722
TGE+ Y C CGK R L +H H+GE+P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 41.8 bits (99), Expect = 4e-05
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C ECG+SF S H + H+G K
Sbjct: 1 GSSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEK 39
Score = 39.9 bits (94), Expect = 2e-04
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +GEK C CGK R L +H H+GE+P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 39.1 bits (92), Expect = 3e-04
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C CG SF H + H+
Sbjct: 1 GSSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHS 36
Score = 38.7 bits (91), Expect = 4e-04
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C ECG+SF S H + H+G
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG 37
Score = 37.9 bits (89), Expect = 0.001
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y CK CG R S L H R+H+GE+P
Sbjct: 9 GEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 31.8 bits (73), Expect = 0.14
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P+ CK CGK F+ L++H+ RVH G K
Sbjct: 6 SGTGEKPYNCKECGKSFRWASCLLKHQ-RVHSGEK 39
Score = 31.0 bits (71), Expect = 0.27
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C C + S LL H H+G KP
Sbjct: 14 NCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 28.7 bits (65), Expect = 1.7
Identities = 9/30 (30%), Positives = 10/30 (33%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
C CG F L H H+G K
Sbjct: 14 NCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.0
Identities = 11/46 (23%), Positives = 15/46 (32%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K + C CG F + + H H+G K S
Sbjct: 4 GSSGTGEKP-----YNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 26.8 bits (60), Expect = 9.3
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K + C C K++ L H H+GEK
Sbjct: 11 KPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein,
phosphorylation, polymorphism, repeat, repressor,
transcription; NMR {Homo sapiens}
Length = 46
Score = 56.0 bits (136), Expect = 3e-10
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ GE+ + C C F S LR+H H GE+P S
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 53.7 bits (130), Expect = 2e-09
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ GE+ + C C + L +H H GE+P +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 51.4 bits (124), Expect = 1e-08
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ GE+ + C C F L +H H GE+P S
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 47.2 bits (113), Expect = 4e-07
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
G K + C C F+Q S+L +H+ +H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35
Score = 45.6 bits (109), Expect = 2e-06
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C C F Q L H+ VH G KP
Sbjct: 2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+ + C EC F+ S+ LH H G K
Sbjct: 1 GSSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEK 39
Score = 42.5 bits (101), Expect = 2e-05
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 436 AHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGC 475
+ GE+ C C L+ H H GE+P G
Sbjct: 2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
GE+ + C C L+ H H GE+P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 11/41 (26%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ GEK C C L H H GE+P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 39.1 bits (92), Expect = 4e-04
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+ + C EC F+ S+ LH H G
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG 37
Score = 38.3 bits (90), Expect = 6e-04
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
GE+ + C C F+ + LH H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHV 36
Score = 37.9 bits (89), Expect = 9e-04
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K + C+ C S+L+ H +H GE+P
Sbjct: 9 GEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.057
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C M +S S L H N H G KP
Sbjct: 14 KCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.16
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ G K +KC CD +S L+ H+ H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35
Score = 31.0 bits (71), Expect = 0.23
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C C F+ +L+ H N H G K
Sbjct: 14 KCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.3
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +C+ C F L H + VH+G K
Sbjct: 6 SGMGEKTWKCRECDMCFSQASSLRLH-QNVHVGEK 39
Score = 28.3 bits (64), Expect = 2.5
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+S G K + C C + A L+ H H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35
Score = 27.5 bits (62), Expect = 4.8
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Query: 176 VHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
MG +K ++C C + L H N H GEK
Sbjct: 6 SGMG---EKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 27.1 bits (61), Expect = 6.4
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
+ C C F+ +L +H
Sbjct: 12 TWKCRECDMCFSQASSLRLH 31
Score = 26.7 bits (60), Expect = 7.9
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 663 GNKYHSCKVCGA--EIKGSLKEHMIVHTGERKYCC 695
G K C+ C SL+ H VH GE+
Sbjct: 9 GEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 4e-10
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C VCG + +L H+R HT E +
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 54.4 bits (132), Expect = 1e-09
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 1081 EHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY+C CG +F ++L H+R H E S
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 54.1 bits (131), Expect = 1e-09
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 708 EHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY+C +CG F +L H+R H E S
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 51.4 bits (124), Expect = 2e-08
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 1259 HMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACD 1300
+ ++C VCGK F+ +L +H RVHT
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 47.9 bits (115), Expect = 2e-07
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 437 HMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCE 476
TGE+P C++CGK L L H+ HT E G
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 47.5 bits (114), Expect = 4e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 1286 EHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY+C++C K F + LN H ++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35
Score = 46.4 bits (111), Expect = 8e-07
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 682 EHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C++CGK + L +H+ HT E
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 44.4 bits (106), Expect = 4e-06
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACE 1095
+ +GEK C++CGK L LN+H+ HT E
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 41.0 bits (97), Expect = 8e-05
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY CN CG +F N HL+ HT
Sbjct: 1 GSSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHT 36
Score = 40.6 bits (96), Expect = 1e-04
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 737 HMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
GE+PY C+ CG++F + + HL+ H
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 38.6 bits (91), Expect = 5e-04
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C +CG + ++L H+R+HT E
Sbjct: 9 GEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P++C+ CG++F + + HL+ H
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ 37
Score = 32.1 bits (74), Expect = 0.11
Identities = 14/45 (31%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Query: 279 AKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
E +P+ C CGK F HL QH RVH
Sbjct: 1 GSSGSSGTGE-----KPYSCNVCGKAFVLSAHLNQH-LRVHTQET 39
Score = 31.3 bits (72), Expect = 0.19
Identities = 11/49 (22%), Positives = 15/49 (30%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K + C CG F+ H+ H+ HT S
Sbjct: 2 SSGS-SGTGEKP-----YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 30.9 bits (71), Expect = 0.25
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQE 629
++ TG K Y C+VC + HL +H H QE
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQE 38
Score = 30.6 bits (70), Expect = 0.38
Identities = 9/31 (29%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCD 607
CN+CG F L H+ HT
Sbjct: 14 SCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 29.8 bits (68), Expect = 0.59
Identities = 7/30 (23%), Positives = 10/30 (33%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C+ C + + L HL HT
Sbjct: 14 SCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 28.6 bits (65), Expect = 1.9
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K C+VCGK+F + HL H
Sbjct: 1 GSSGSSGTG-EKPYSCNVCGKAFVLSAHLNQH 31
Score = 27.1 bits (61), Expect = 6.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
+ C+ CGK+F + HL +H
Sbjct: 13 YSCNVCGKAFVLSAHLNQH 31
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 4e-10
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSE 1124
+ TGE+PY C CG SF KS+L H R H GE+P S
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS 45
Score = 54.1 bits (131), Expect = 1e-09
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG ++ K +L H R HTGE+P +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 54.1 bits (131), Expect = 2e-09
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSE 751
+ TGE+PY C CG +F K +L H R H GE+P S
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS 45
Score = 49.0 bits (118), Expect = 1e-07
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK FIQK +L H+R+HTG KP
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 3e-07
Identities = 17/33 (51%), Positives = 20/33 (60%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K F QKS LN HR++H
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C+ CGK + L H HTGE+P
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 41.3 bits (98), Expect = 5e-05
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY+C+ECG+SF +S + H + H G K
Sbjct: 1 GSSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEK 39
Score = 40.2 bits (95), Expect = 1e-04
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY+CN CG SF + N H + HT
Sbjct: 1 GSSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHT 36
Score = 40.2 bits (95), Expect = 1e-04
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYACE 1095
+ +GEK C+ CGK + LN H HTGE+P
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 6e-04
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C+ECG+SF +S + H + H G
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG 37
Score = 35.2 bits (82), Expect = 0.007
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y+C CG KS+L H RIHTGE+P
Sbjct: 9 GEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.20
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C+ C + KS L H HTG KP
Sbjct: 14 ICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.25
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P+ C CGK F + HL +H RR+H G K
Sbjct: 6 SGTGEKPYICNECGKSFIQKSHLNRH-RRIHTGEK 39
Score = 30.6 bits (70), Expect = 0.35
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
CN CG F K L H HTG K
Sbjct: 14 ICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.39
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K + C CG FI ++H+ H HTG K S
Sbjct: 4 GSSGTGEKP-----YICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 1.0
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K Y C+ C + HL RH+ H
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35
Score = 27.9 bits (63), Expect = 3.7
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K C+ CGKSF + HL H
Sbjct: 1 GSSGSSGTG-EKPYICNECGKSFIQKSHLNRH 31
Score = 27.5 bits (62), Expect = 5.0
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K + C C K+++ + L H HTGEK
Sbjct: 11 KPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 9.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
+ C+ CGKSF +HL RH
Sbjct: 13 YICNECGKSFIQKSHLNRH 31
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 4e-10
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ +GERPY C CG +F S+L H+++H E+ S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 54.4 bits (132), Expect = 1e-09
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ +GERP+GC CG + +L H+++H E+ +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 52.5 bits (127), Expect = 6e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ +GERPY C CG F +L H+++H E+ S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 47.1 bits (113), Expect = 5e-07
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 437 HMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGC 475
+GERP C+ CGK L +H+ H E+ G
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 46.7 bits (112), Expect = 6e-07
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 1259 HMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ R + C CGK F + +L EH + H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 45.2 bits (108), Expect = 2e-06
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
+GER Y C+ CGK L EH+ H E+
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 44.4 bits (106), Expect = 4e-06
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFIC 1327
+G +PY C+ C K F + S L H K H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 44.0 bits (105), Expect = 6e-06
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +GERPY C+ECG++F S HLK+H K
Sbjct: 1 GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 41.3 bits (98), Expect = 5e-05
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GERPY CN CG +F HLKRH
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHF 36
Score = 41.0 bits (97), Expect = 7e-05
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ SGE+ C+ CGK L EH+ H E+
Sbjct: 2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GERP+ C+ECG++F S HLK+H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR 37
Score = 35.6 bits (83), Expect = 0.007
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G++ Y C CG S+L H++ H E+
Sbjct: 9 GERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 34.4 bits (80), Expect = 0.014
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S RP+ C CGK F HL++H + H K
Sbjct: 6 SGSGERPYGCNECGKNFGRHSHLIEHL-KRHFREK 39
Score = 30.9 bits (71), Expect = 0.28
Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQE 629
++ +G + Y C+ C + HL H +H +E
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFRE 38
Score = 30.9 bits (71), Expect = 0.29
Identities = 9/30 (30%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
CN CG F L +H+ H K
Sbjct: 14 GCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 30.6 bits (70), Expect = 0.37
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C+ C + S L++HL H K
Sbjct: 14 GCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 30.2 bits (69), Expect = 0.54
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
+ C CG F +H+ +H+ H K+ S
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 29.0 bits (66), Expect = 1.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+S +G +PY C+ C ++ L HLKRH
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35
Score = 27.1 bits (61), Expect = 6.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 1826 CDVCGKSFARTFHLKSH 1842
C+ CGK+F R HL H
Sbjct: 15 CNECGKNFGRHSHLIEH 31
Score = 26.3 bits (59), Expect = 9.9
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
+ + C C K + L +H+ H EK
Sbjct: 11 RPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 4e-10
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSE 1124
+ TGE+PY C+ C SF+ S L +H R H GE+P S
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS 45
Score = 55.2 bits (134), Expect = 6e-10
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C+VC +++Y L VH R HTGE+P +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 54.4 bits (132), Expect = 1e-09
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSE 751
+ TGE+PY C++C +F+ L VH R H GE+P S
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS 45
Score = 48.7 bits (117), Expect = 1e-07
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY CD+C K F S+L +H+++H
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35
Score = 47.9 bits (115), Expect = 3e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C+VC K F L H+R+HTG KP
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 43.7 bits (104), Expect = 8e-06
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE+ Y C +C K + L H HTGE+P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 5e-05
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C C +SF S+ ++H + H G K
Sbjct: 1 GSSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK 39
Score = 41.0 bits (97), Expect = 6e-05
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYAC 1094
+ +GEK C +C K R L H HTGE+P
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C+ C SF + +H + HT
Sbjct: 1 GSSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHT 36
Score = 39.0 bits (92), Expect = 4e-04
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C +C R S+L H RIHTGE+P
Sbjct: 9 GEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C C +SF S+ ++H + H G
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG 37
Score = 31.3 bits (72), Expect = 0.17
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C++C F +L H HTG K
Sbjct: 14 KCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.36
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C C K F+ L H +R+H G K
Sbjct: 6 SGTGEKPYKCDVCHKSFRYGSSLTVH-QRIHTGEK 39
Score = 29.8 bits (68), Expect = 0.66
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C + S L H HTG KP
Sbjct: 14 KCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 2.0
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKCDVC + L H+ H
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35
Score = 27.1 bits (61), Expect = 5.9
Identities = 11/49 (22%), Positives = 15/49 (30%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C C F + + H HTG K S
Sbjct: 2 SS-GSSGTGEKP-----YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 6.8
Identities = 10/32 (31%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +CDVC KSF L H
Sbjct: 1 GSSGSSGTG-EKPYKCDVCHKSFRYGSSLTVH 31
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 4e-10
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE P+ C CG F K+ L IH + H GERP S
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 55.6 bits (135), Expect = 5e-10
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE PF C CG + +K L +H + HTGERP +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 53.7 bits (130), Expect = 2e-09
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE P+ C CG F K L +H + H GERP S
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 47.9 bits (115), Expect = 2e-07
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ F C CGK F K L H+++HTG +P
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 47.9 bits (115), Expect = 3e-07
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKL--RGKLKDHMLTHTGERPFGC 475
+ TGE P C CGK + L H HTGERP G
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 47.5 bits (114), Expect = 3e-07
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG P+ C C K FT K+ L IH+K+H
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35
Score = 45.2 bits (108), Expect = 2e-06
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE P++CSECG+ F ++ +H K H G +
Sbjct: 1 GSSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER 39
Score = 44.4 bits (106), Expect = 4e-06
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE + C CGK + L H HTGERP
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 40.9 bits (97), Expect = 6e-05
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE PF CSECG+ F ++ +H K H G
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG 37
Score = 40.9 bits (97), Expect = 7e-05
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYAC 1094
+ +GE C CGK + L H HTGERP
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 40.2 bits (95), Expect = 2e-04
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE P++C+ CG F + +H K HT
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHT 36
Score = 37.1 bits (87), Expect = 0.001
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+ ++C CG K+NL H +IHTGERP
Sbjct: 9 GENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 32.5 bits (75), Expect = 0.080
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C C ++ K+ L+ H HTG +P
Sbjct: 14 ICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 30.9 bits (71), Expect = 0.24
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ P C CGK F + +L+ H+ ++H G +
Sbjct: 6 SGTGENPFICSECGKVFTHKTNLIIHQ-KIHTGER 39
Score = 30.5 bits (70), Expect = 0.33
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
C+ CG +F K L H HTG +
Sbjct: 14 ICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 29.0 bits (66), Expect = 1.4
Identities = 12/46 (26%), Positives = 16/46 (34%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G F C CG F +T++ H HTG + S
Sbjct: 4 GSSGTGENP-----FICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 28.6 bits (65), Expect = 1.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
PFIC C K FT K NL +H
Sbjct: 12 PFICSECGKVFTHKTNLIIH 31
Score = 27.1 bits (61), Expect = 5.5
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
F C+ C K + + L H HTGE+
Sbjct: 11 NPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 55.6 bits (135), Expect = 4e-10
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFT 1121
+ GE+PY CE CG+ F ++LR H+ H G P +
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 54.5 bits (132), Expect = 1e-09
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPY 501
+ GE+P+ CE CG+ + +L H+ HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 53.3 bits (129), Expect = 3e-09
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPY 747
+ GE+PY CE CG F +L H+ H G P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 49.1 bits (118), Expect = 9e-08
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 683 HMIVHTGERKYCCHICGKK--MRGKLKEHMLTHTGERPYA 720
GE+ Y C CG + L+ H+L HTG P +
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 47.9 bits (115), Expect = 2e-07
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 437 HMRIHTGERPVCCHICGKKL--RGKLKDHMLTHTGERPF 473
GE+P C CG + L+ H+L HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 47.9 bits (115), Expect = 3e-07
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
G KPY C+ C +F Q + L H +H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 47.5 bits (114), Expect = 3e-07
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 1259 HMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYA 1298
+ + CE CG F+Q +L H +HTG P +
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 45.2 bits (108), Expect = 2e-06
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 1056 HMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYA 1093
+ GEK C CG + L H+L HTG P +
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 41.0 bits (97), Expect = 6e-05
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 417 GDKCYLCKICGARV--KSNLKAHMRIHTGERP 446
G+K Y C+ CGAR ++L+AH+ IHTG P
Sbjct: 8 GEKPYKCETCGARFVQVAHLRAHVLIHTGSGP 39
Score = 40.6 bits (96), Expect = 9e-05
Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Query: 737 HMRKHNGERPYMCSECGQSFAARSAFSLHLKKH 769
GE+PY C CG F + HL+ H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVA----HLRAH 30
Score = 38.7 bits (91), Expect = 5e-04
Identities = 11/34 (32%), Positives = 13/34 (38%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
GE+PY C CG F H+ HT
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHT 35
Score = 37.9 bits (89), Expect = 7e-04
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
+ G K YKC+ C + + HL+ H + H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 37.5 bits (88), Expect = 0.001
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKH 1142
GE+P+ C CG F + HL+ H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVA----HLRAH 30
Score = 31.0 bits (71), Expect = 0.26
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+P++C+ CG F HL H +H G
Sbjct: 5 SSGGEKPYKCETCGARFVQVAHLRAHV-LIHTGSG 38
Score = 30.6 bits (70), Expect = 0.35
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
++C+TCG F HL+ H
Sbjct: 12 YKCETCGARFVQVAHLRAH 30
Score = 30.2 bits (69), Expect = 0.42
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIK 356
++C CGA+F+ H+ H+ HTG
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 29.4 bits (67), Expect = 0.78
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPY 43
+C C R+ + L H+ HTG P
Sbjct: 13 KCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 29.4 bits (67), Expect = 0.86
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK 603
+C CGA F L+ H+ HTG+
Sbjct: 13 KCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 29.4 bits (67), Expect = 0.95
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 663 GNKYHSCKVCGAEI--KGSLKEHMIVHTGERKY 693
G K + C+ CGA L+ H+++HTG
Sbjct: 8 GEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 29.0 bits (66), Expect = 1.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 204 HINNHTGEKGHICEICNRDFYSDAMLKRHLVKH 236
+ GEK + CE C F A L+ H++ H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 28.6 bits (65), Expect = 1.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 1825 QCDVCGKSFARTFHLKSH 1842
+C+ CG F + HL++H
Sbjct: 13 KCETCGARFVQVAHLRAH 30
Score = 28.6 bits (65), Expect = 1.5
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
S G KPY C C +V L+ H+ H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 28.3 bits (64), Expect = 2.2
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
P+ CE C F +L H
Sbjct: 11 PYKCETCGARFVQVAHLRAH 30
Score = 27.9 bits (63), Expect = 2.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 975 KKFKCDVCGNGYTSVKHLKRHKIKHMKE 1002
K +KC+ CG + V HL+ H + H
Sbjct: 10 KPYKCETCGARFVQVAHLRAHVLIHTGS 37
Score = 27.9 bits (63), Expect = 3.0
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEK 212
K ++C C ++ L H+ HTG
Sbjct: 10 KPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 27.5 bits (62), Expect = 4.1
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 1036 GNKCHICKVCGAKI--KGNLQQHMETHSGEK 1064
G K + C+ CGA+ +L+ H+ H+G
Sbjct: 8 GEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 5e-10
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ +G++P+ C+ C T+ +L H R HTGER +
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 55.2 bits (134), Expect = 6e-10
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSE 1124
+ +G++PY C+ C +F +L H R H GER S
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45
Score = 53.7 bits (130), Expect = 2e-09
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSE 751
+ +G++PY C+ C TF +L H R H GER S
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45
Score = 47.1 bits (113), Expect = 4e-07
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + + C+ C K FIQ +L +HKRVHTG +
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 45.2 bits (108), Expect = 2e-06
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G KPY C C K F Q LN H+++H
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35
Score = 44.8 bits (107), Expect = 3e-06
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCE 476
+ +G++P C C K G L H HTGER G
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
+G++ Y C C K G L +H HTGER
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 42.1 bits (100), Expect = 3e-05
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACE 1095
+ SG+K C C K G LN+H HTGER
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 41.0 bits (97), Expect = 7e-05
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +G++PY C EC ++F + H + H G +
Sbjct: 1 GSSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGER 39
Score = 37.5 bits (88), Expect = 0.001
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+G++PY C C +F N H + HT
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHT 36
Score = 37.5 bits (88), Expect = 0.001
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G K Y CK C +L H R+HTGER
Sbjct: 9 GKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+G++P+ C EC ++F + H + H G
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG 37
Score = 33.7 bits (78), Expect = 0.027
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S +P++CK C K F HL QH +RVH G +
Sbjct: 7 GSGKKPYECKECRKTFIQIGHLNQH-KRVHTGER 39
Score = 32.1 bits (74), Expect = 0.089
Identities = 8/30 (26%), Positives = 10/30 (33%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C + L H HTG +
Sbjct: 14 ECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 31.0 bits (71), Expect = 0.23
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
+EC C FI H+ H HTG ++ S
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 29.8 bits (68), Expect = 0.56
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQE 629
++ +G K Y+C C + + HL +HK H E
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGE 38
Score = 29.4 bits (67), Expect = 0.79
Identities = 9/30 (30%), Positives = 10/30 (33%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC C F L H HTG +
Sbjct: 14 ECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 29.0 bits (66), Expect = 1.2
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K +EC C KT++ L H HTGE+
Sbjct: 11 KPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 27.1 bits (61), Expect = 5.6
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+S +G KPY C C+ +++ L +H + H
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35
Score = 26.7 bits (60), Expect = 7.0
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
++C C K+F HL +H
Sbjct: 13 YECKECRKTFIQIGHLNQH 31
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 5e-10
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+ Y C+ CG SF L H R H+GE+P S
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 55.2 bits (134), Expect = 6e-10
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+ + C+ CG ++ L H R H+GE+P +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 52.9 bits (128), Expect = 4e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+ Y C+ CG +F L H R H+GE+P S
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 47.9 bits (115), Expect = 2e-07
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ +++ C+ CGK F + L +H+R+H+G KP
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 47.1 bits (113), Expect = 4e-07
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKL--RGKLKDHMLTHTGERPFGC 475
+ TGE+ C CGK L H H+GE+P G
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 47.1 bits (113), Expect = 5e-07
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG K Y C C K F++ L H +LH
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35
Score = 44.4 bits (106), Expect = 4e-06
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE+ Y C CGK L +H H+GE+P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 43.3 bits (103), Expect = 1e-05
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+ Y C ECG+SF+ H + H+G K
Sbjct: 1 GSSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK 39
Score = 40.6 bits (96), Expect = 9e-05
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+ Y C CG SF+ P H + H+
Sbjct: 1 GSSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHS 36
Score = 40.2 bits (95), Expect = 1e-04
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYAC 1094
+ +GEK C CGK L +H H+GE+P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+ + C ECG+SF+ H + H+G
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG 37
Score = 35.6 bits (83), Expect = 0.005
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y CK CG L H R+H+GE+P
Sbjct: 9 GEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.075
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ + + CK CGK F L++HE R+H G K
Sbjct: 6 SGTGEKLYNCKECGKSFSRAPCLLKHE-RLHSGEK 39
Score = 31.7 bits (73), Expect = 0.12
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C C +S LL H H+G KP
Sbjct: 14 NCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.55
Identities = 9/30 (30%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
C CG F+ L H H+G K
Sbjct: 14 NCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.0
Identities = 11/46 (23%), Positives = 14/46 (30%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K + C CG F + H H+G K S
Sbjct: 4 GSSGTGEKL-----YNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 27.9 bits (63), Expect = 3.5
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K Y C C +S L +H+ H
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35
Score = 26.7 bits (60), Expect = 8.9
Identities = 10/32 (31%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K C CGKSF+R L H
Sbjct: 1 GSSGSSGTG-EKLYNCKECGKSFSRAPCLLKH 31
Score = 26.3 bits (59), Expect = 9.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+S TG K Y C C S+ A L +H + H
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.2 bits (134), Expect = 5e-10
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSE 1124
+ TGE+PY C+ C +F K++L H + H GE+P S
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS 45
Score = 54.8 bits (133), Expect = 9e-10
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C+VC + K +LA H + HTGE+P +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 54.1 bits (131), Expect = 1e-09
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSE 751
+ TGE+PY C++C F K +L H + H GE+P S
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS 45
Score = 47.1 bits (113), Expect = 4e-07
Identities = 17/33 (51%), Positives = 20/33 (60%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C +CSK FTQK+ L H+K H
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35
Score = 47.1 bits (113), Expect = 5e-07
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C+VC K F QK +L +H++ HTG KP
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 44.1 bits (105), Expect = 6e-06
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C +C K + L +H THTGE+P
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 3e-05
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C C ++F ++ + H K H G K
Sbjct: 1 GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEK 39
Score = 40.6 bits (96), Expect = 8e-05
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYACE 1095
+ +GEK C +C K + L +H THTGE+P
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 9e-05
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C C +F + H K HT
Sbjct: 1 GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHT 36
Score = 37.9 bits (89), Expect = 7e-04
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C C ++F ++ + H K H G
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG 37
Score = 35.6 bits (83), Expect = 0.006
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y CK+C K++L H + HTGE+P
Sbjct: 9 GEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.035
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C+ ++ K+ L H +HTG KP
Sbjct: 14 ECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.044
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++CK C K F + HL QH+ + H G K
Sbjct: 6 SGTGEKPYECKVCSKAFTQKAHLAQHQ-KTHTGEK 39
Score = 32.9 bits (76), Expect = 0.056
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K +EC C F + H+A H +HTG K S
Sbjct: 4 GSSGTGEKP-----YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.44
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC +C F K L H THTG K
Sbjct: 14 ECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.85
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K +EC CSK + + L H HTGEK
Sbjct: 11 KPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 3.1
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C VC K+F + HL H
Sbjct: 1 GSSGSSGTG-EKPYECKVCSKAFTQKAHLAQH 31
Score = 27.5 bits (62), Expect = 4.0
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K Y+C VC ++ HL +H+ H
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 48
Score = 55.4 bits (134), Expect = 6e-10
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 1082 HMLTHTGERPYACEF--CGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+P+AC + CG F L H R H+G +P S
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 51.1 bits (123), Expect = 2e-08
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 463 HMLTHTGERPFGC--EVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+PF C CG + L+ H R H+G +P +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 49.6 bits (119), Expect = 6e-08
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 436 AHMRIHTGERPVCCH--ICGKKLR--GKLKDHMLTHTGERPFGCE 476
+ TGE+P C CG + +L H +H+G +P G
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 48.5 bits (116), Expect = 1e-07
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 709 HMLTHTGERPYAC--EICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+P+AC CG F L H R H+G +P S
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 46.5 bits (111), Expect = 8e-07
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 1287 HKRVHTGYKPYACD--LCSKQFTQKSTLNIHRKLHLNIKDFICD 1328
TG KP+AC C +F++ L+ HR+ H +K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 42.7 bits (101), Expect = 2e-05
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 1258 THMLIHANNRVFTC--EVCGKGFIQKRYLEEHKRVHTGYKPYACD 1300
+ + F C CG F + L H+R H+G KP
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 42.3 bits (100), Expect = 2e-05
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 683 HMIVHTGERKYCCH--ICGKKMR--GKLKEHMLTHTGERPYACE 722
TGE+ + C CG + +L H +H+G +P
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 41.1 bits (97), Expect = 7e-05
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 735 GVHMRKHNGERPYMCSE--CGQSFAARSAFSLHLKKHAGFK 773
G GE+P+ C+ CG F+ S H + H+G K
Sbjct: 1 GSSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK 41
Score = 40.7 bits (96), Expect = 8e-05
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 491 HMRKHTGERPYVCNY--CGHSFAARPAFNLHLKRHT 524
TGE+P+ C + CG F+ + H + H+
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS 38
Score = 38.8 bits (91), Expect = 5e-04
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 1110 HIRKHNGERPFTCSE--CGQSFAARSAFSLHLKKHAG 1144
GE+PF C+ CG F+ S H + H+G
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG 39
Score = 38.8 bits (91), Expect = 5e-04
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 1056 HMETHSGEKKICCH--ICGKKLR--GRLNEHMLTHTGERPYACE 1095
+ +GEK C CG + L+ H +H+G +P
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 32.3 bits (74), Expect = 0.094
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 4/43 (9%)
Query: 411 HRDWVHGDKCYLCK--ICGARV--KSNLKAHMRIHTGERPVCC 449
G+K + C CG R L H R H+G +P
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 30.0 bits (68), Expect = 0.70
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Query: 285 HIREVHSKVRPHQCK--GCGKYFKSQRHLVQHERRVHLGVKK 324
+ +P C GCG F L +H RR H GVK
Sbjct: 3 SGS-SGTGEKPFACTWPGCGWRFSRSDELSRH-RRSHSGVKP 42
Score = 29.6 bits (67), Expect = 0.94
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 891 HISAHLGIKPYCCIF--CEEKYFSKKSLKRHEAKH 923
S+ G KP+ C + C ++ L RH H
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37
Score = 29.6 bits (67), Expect = 0.98
Identities = 12/36 (33%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Query: 204 HINNHTGEKGHIC--EICNRDFYSDAMLKRHLVKHS 237
++ TGEK C C F L RH HS
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS 38
Score = 28.4 bits (64), Expect = 1.9
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 33 HLNSHTGLKPYICH--ICKNSYVAAKGLKRHLKRH 65
+S TG KP+ C C + + L RH + H
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37
Score = 28.4 bits (64), Expect = 2.4
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
Query: 595 HMNTHTGNK-YKCDV--CDNGYSSLKHLKRHKMKH 626
++ TG K + C C +S L RH+ H
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37
Score = 27.3 bits (61), Expect = 5.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 20 CAMRYSSKSQLLDHLNSHTGLKPYIC 45
C R+S +L H SH+G+KP
Sbjct: 20 CGWRFSRSDELSRHRRSHSGVKPSGP 45
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 95
Score = 56.9 bits (137), Expect = 6e-10
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSN---FECFHCGAKFISRTHI 345
+ K C + F + LV H H+G + + EC G F ++ +
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 346 ADHMTSHTGIKNHVCS 361
+H+ HTG K+ S
Sbjct: 79 VNHIRVHTGEKSGPSS 94
Score = 52.3 bits (125), Expect = 3e-08
Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 11/75 (14%)
Query: 440 IHTGERPVCCHICGKKL--RGKLKDHML-THTGERPF--------GCEVCGSTYKYKYYL 488
I + C + +L H+ H G C G ++K KY L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 489 AVHMRKHTGERPYVC 503
H+R HTGE+
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 50.0 bits (119), Expect = 2e-07
Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 147 LHDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKF-----ECAHCSKTYLSRVGL 201
+ ++ P + C + F+++ + H + H+G ++ EC K++ ++ L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 202 EDHINNHTGEKGHIC 216
+HI HTGEK
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 49.2 bits (117), Expect = 3e-07
Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 11/76 (14%)
Query: 686 VHTGERKYCCHICGKK--MRGKLKEHML-THTGERPYA--------CEICGGTFKTKWYL 734
+ + C + +L H+ H G C G +FK K+ L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 735 GVHMRKHNGERPYMCS 750
H+R H GE+ S
Sbjct: 79 VNHIRVHTGEKSGPSS 94
Score = 48.4 bits (115), Expect = 7e-07
Identities = 19/76 (25%), Positives = 23/76 (30%), Gaps = 11/76 (14%)
Query: 1059 THSGEKKICCHICGKKL--RGRLNEHML-THTGERPYA--------CEFCGSSFKDKSYL 1107
+ C + L H+ H G C G SFK K L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 1108 RIHIRKHNGERPFTCS 1123
HIR H GE+ S
Sbjct: 79 VNHIRVHTGEKSGPSS 94
Score = 46.9 bits (111), Expect = 2e-06
Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 9/74 (12%)
Query: 1235 DDSVTYYPCTVCSKNLSSPYRLKTHML-IHANNRVFT--------CEVCGKGFIQKRYLE 1285
D++ P C + S+ + L TH+ H C GK F K L
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 1286 EHKRVHTGYKPYAC 1299
H RVHTG K
Sbjct: 80 NHIRVHTGEKSGPS 93
Score = 44.6 bits (105), Expect = 1e-05
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 831 VHIEIKTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPN--QLLECHYCGITKNNKTLL 888
+ + + CD+ F+T +L H H G + EC G + K L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 889 RDHISAHLGIKPYCC 903
+HI H G K
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 41.1 bits (96), Expect = 2e-04
Identities = 15/75 (20%), Positives = 19/75 (25%), Gaps = 9/75 (12%)
Query: 1262 IHANNRVFTCEVCGKGFIQKRYLEEH-KRVHTGYKPYA--------CDLCSKQFTQKSTL 1312
I + C + F L H H G C K F K L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 1313 NIHRKLHLNIKDFIC 1327
H ++H K
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 40.3 bits (94), Expect = 4e-04
Identities = 18/94 (19%), Positives = 28/94 (29%), Gaps = 27/94 (28%)
Query: 1007 PPSMIHKCPTCYKIFTENHALKKHLDWVH----GNKCHICKVCGAKIKGNLQQHMETHSG 1062
+ +C + F+ H L H+ H H+C
Sbjct: 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEE---------------- 64
Query: 1063 EKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
C GK K + +L H+ HTGE+
Sbjct: 65 -----CPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 38.4 bits (89), Expect = 0.002
Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 9/68 (13%)
Query: 466 THTGERPFGCEVCGSTYKYKYYLAVHMRK-HTGERPYVCNYC--------GHSFAARPAF 516
+ + C T+ + L H+ H G + C G SF A+
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 517 NLHLKRHT 524
H++ HT
Sbjct: 79 VNHIRVHT 86
Score = 38.4 bits (89), Expect = 0.002
Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
Query: 1114 HNGERPFTCSECGQSFAARSAFSLHLKK-HAGSHILRRHIGYTVFCKECNIGFYSSTHLH 1172
+ C ++F+ H+ H G H+ Y C F + L
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 1173 SHGIKVH-GLPPFIC 1186
+H I+VH G
Sbjct: 80 NH-IRVHTGEKSGPS 93
Score = 35.3 bits (81), Expect = 0.027
Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 6/71 (8%)
Query: 1819 PIDKNCQCDVCGKSFARTFHLKSHISSVHLKREQRKKHERKDHETQGLFSCDLCSYTSTQ 1878
+ C ++F+ L +H++ H+ ++ H E C +
Sbjct: 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEE------CPREGKSFKA 74
Query: 1879 KYYLVKHKSRH 1889
KY LV H H
Sbjct: 75 KYKLVNHIRVH 85
Score = 34.2 bits (78), Expect = 0.070
Identities = 17/114 (14%), Positives = 25/114 (21%), Gaps = 42/114 (36%)
Query: 495 HTGERPYVCNYCGHSFAARPAFNLHLKR-HTERGDVRHIECQHSLKIIEYKIYQWISIEN 553
+ C +F+ H+ H + + C
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE---------------- 63
Query: 554 WFKIKRENVPSTKDQSHKKRDQKIECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC G F KY L +H+ HTG K
Sbjct: 64 ------------------------ECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 33.4 bits (76), Expect = 0.11
Identities = 17/73 (23%), Positives = 24/73 (32%), Gaps = 11/73 (15%)
Query: 634 PPSKIQKCPICHKIFIRNYMLRKHLDFVH-GNKYHSCKVCGAE----------IKGSLKE 682
+ C + F + L H+ H G + VC E K L
Sbjct: 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80
Query: 683 HMIVHTGERKYCC 695
H+ VHTGE+
Sbjct: 81 HIRVHTGEKSGPS 93
Score = 33.0 bits (75), Expect = 0.17
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC + +K +L++H+ HTG K
Sbjct: 64 ECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 31.9 bits (72), Expect = 0.35
Identities = 17/101 (16%), Positives = 27/101 (26%), Gaps = 30/101 (29%)
Query: 352 HTGIKNHVCSICQSTYTTARGLKRH-NKNHLREAGVLRADEMYKCDKCDKLFIEQSEMVQ 410
+ C T++T L H H+ + C +
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGG----PEQNNHVCYWEE----------- 64
Query: 411 HRDWVHGDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
C G + K L H+R+HTGE+
Sbjct: 65 ------------CPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 31.5 bits (71), Expect = 0.65
Identities = 6/42 (14%), Positives = 12/42 (28%), Gaps = 1/42 (2%)
Query: 1290 VHTGYKPYACDLCSKQFTQKSTLNIH-RKLHLNIKDFICDLC 1330
+ C + F+ L H H+ + +C
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60
Score = 30.7 bits (69), Expect = 1.2
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Query: 11 RQLNVECHHCAMRYSSKSQLLDHLNS-HTGLKPYICHICKNSYVAAKGL----KRHLKRH 65
QL+ C +S+ +L+ H+ H G H+C +G K L H
Sbjct: 22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH 81
Query: 66 MQ 67
++
Sbjct: 82 IR 83
Score = 29.9 bits (67), Expect = 2.1
Identities = 15/94 (15%), Positives = 29/94 (30%), Gaps = 17/94 (18%)
Query: 207 NHTGEKGHICEICNRDFYSDAMLKRHLVKHSRMIKETSEEFVETGSITREEWYKMVLQRV 266
+ + C+R F + L H+ E +
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW---------------- 62
Query: 267 KTCPLCKKTYQSAKGMRLHIREVHSKVRPHQCKG 300
+ CP K++++ + HIR VH+ + G
Sbjct: 63 EECPREGKSFKAKYKLVNHIR-VHTGEKSGPSSG 95
Score = 29.6 bits (66), Expect = 2.4
Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 9/66 (13%)
Query: 1617 HIKEYTVFCKKCQLGFLSKNELNVHNIKQHDAQPHT---------CPVCKKIFVNKFNLT 1667
+ + K C F + +EL H +H P CP K F K+ L
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 1668 THKKLH 1673
H ++H
Sbjct: 80 NHIRVH 85
Score = 28.8 bits (64), Expect = 4.7
Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 8/60 (13%)
Query: 1710 FPCRLCSQEFDTKEQRKKHERKDHETQGLFSCDLCSY--------TSTQKYYLVKHKSRH 1761
P + C + F T + H +H + +C + + KY LV H H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Score = 28.4 bits (63), Expect = 5.8
Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
Query: 1675 PMNRNHQCDTCGKSFTGNNHLKRHIYSVHL--KRDTKFPCR--LCSQEFDTKEQRKK 1727
+ +C ++F+ + L H+ H+ C C +E + + + K
Sbjct: 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYK 77
Score = 28.4 bits (63), Expect = 5.9
Identities = 10/55 (18%), Positives = 16/55 (29%), Gaps = 10/55 (18%)
Query: 578 ECNICGALFATKYTLQDHMN-THTGNKYK---------CDVCDNGYSSLKHLKRH 622
C F+T + L H+ H G + C + + L H
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH 81
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.2 bits (134), Expect = 6e-10
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 1081 EHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGER Y C CG +F KS L +H R H GE+P S
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 54.1 bits (131), Expect = 1e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGER + C CG + K L++H R H GE+P +
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 54.1 bits (131), Expect = 1e-09
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 708 EHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGER Y C CG F K L +H R H GE+P S
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 48.7 bits (117), Expect = 1e-07
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 1286 EHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG + Y C C K F QKSTL++H+++H
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35
Score = 47.9 bits (115), Expect = 3e-07
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ R + C CGK FIQK L H+R+H G KP
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 44.8 bits (107), Expect = 3e-06
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 437 HMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGC 475
TGER C CGK K L H H GE+P G
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 44.8 bits (107), Expect = 3e-06
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 682 EHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGER Y C CGK + L H H GE+P
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 43.7 bits (104), Expect = 8e-06
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GER Y CSECG++F +S S+H + H G K
Sbjct: 1 GSSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 40.2 bits (95), Expect = 1e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYAC 1094
+ +GE+ C CGK + L+ H H GE+P
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGER Y C+ CG +F + ++H + H
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHR 36
Score = 39.0 bits (92), Expect = 4e-04
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GER + CSECG++F +S S+H + H G
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG 37
Score = 35.6 bits (83), Expect = 0.005
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G++ Y C CG KS L H RIH GE+P
Sbjct: 9 GERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.15
Identities = 11/30 (36%), Positives = 12/30 (40%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C + KS L H H G KP
Sbjct: 14 ECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.22
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ R ++C CGK F + L H+ R+H G K
Sbjct: 6 SGTGERHYECSECGKAFIQKSTLSMHQ-RIHRGEK 39
Score = 31.0 bits (71), Expect = 0.25
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC+ CG F K TL H H G K
Sbjct: 14 ECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.70
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G + +EC CG FI ++ ++ H H G K S
Sbjct: 2 SS-GSSGTGERH-----YECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 27.5 bits (62), Expect = 4.3
Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Query: 171 QHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
G ++ +EC+ C K ++ + L H H GEK
Sbjct: 2 SSGSS-GTG---ERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.2 bits (134), Expect = 6e-10
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG SF KS L +H + H GE+P S
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 54.5 bits (132), Expect = 1e-09
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C +CG ++ K L VH + HTGE+P +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 54.5 bits (132), Expect = 1e-09
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C ICG +F K L VH + H GE+P S
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 49.1 bits (118), Expect = 1e-07
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C +C K FT+KS L++H+++H
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35
Score = 46.4 bits (111), Expect = 8e-07
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C +CGK F +K L H+++HTG KP
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 44.5 bits (106), Expect = 4e-06
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE+ Y C ICGK + +L H HTGE+P
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 43.7 bits (104), Expect = 8e-06
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY CS CG+SF +S +H + H G K
Sbjct: 1 GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 42.1 bits (100), Expect = 3e-05
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C+ CG SF + ++H + HT
Sbjct: 1 GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHT 36
Score = 41.4 bits (98), Expect = 5e-05
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYAC 1094
+ +GEK C ICGK + +L+ H HTGE+P
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 3e-04
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 1109 IHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ CS CG+SF +S +H + H G
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG 37
Score = 37.1 bits (87), Expect = 0.002
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C ICG KS L H +IHTGE+P
Sbjct: 9 GEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.030
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C ++ KSQL H HTG KP
Sbjct: 14 ECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.20
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC+ICG F K L H HTG K
Sbjct: 14 ECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.30
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F + L H+ ++H G K
Sbjct: 6 SGTGEKPYECSICGKSFTKKSQLHVHQ-QIHTGEK 39
Score = 29.4 bits (67), Expect = 1.0
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K +EC CG F ++ + H HTG K S
Sbjct: 2 SSGS-SGTGEKP-----YECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 6.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K +EC+ C K++ + L H HTGEK
Sbjct: 11 KPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 7.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
P+ C C K FT K L VH
Sbjct: 12 PYECSICGKSFTKKSQLHVH 31
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.2 bits (134), Expect = 7e-10
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C VCG + ++ L+VH R H+G++P +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 54.1 bits (131), Expect = 2e-09
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG +F + L +H R H+G++P S
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 52.9 bits (128), Expect = 5e-09
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C +CG F + L VH R H+G++P S
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 47.9 bits (115), Expect = 3e-07
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C +C K F+ + +L++H+++H
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35
Score = 45.6 bits (109), Expect = 2e-06
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 1259 HMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + C VCGK F ++ L H+R+H+G KP
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 44.0 bits (105), Expect = 5e-06
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C +CGK R L H H+G++P
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 43.7 bits (104), Expect = 7e-06
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY CS CG++F+ R + S+H + H+G K
Sbjct: 1 GSSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 42.5 bits (101), Expect = 2e-05
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C+ CG +F+ R + ++H + H+
Sbjct: 1 GSSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHS 36
Score = 41.0 bits (97), Expect = 6e-05
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYACE 1095
+ +GEK C +CGK R L+ H H+G++P
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 39.0 bits (92), Expect = 4e-04
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 1109 IHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ CS CG++F+ R + S+H + H+G
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG 37
Score = 36.7 bits (86), Expect = 0.002
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C +CG + +L H RIH+G++P
Sbjct: 9 GEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 31.3 bits (72), Expect = 0.17
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C +S + L H H+G KP
Sbjct: 14 ECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 31.3 bits (72), Expect = 0.19
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC++CG F+ + +L H H+G K
Sbjct: 14 ECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 30.6 bits (70), Expect = 0.39
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F ++ L H+ R+H G K
Sbjct: 6 SGTGEKPYECSVCGKAFSHRQSLSVHQ-RIHSGKK 39
Score = 29.0 bits (66), Expect = 1.1
Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K +EC CG F R ++ H H+G K S
Sbjct: 4 GSSGTGEKP-----YECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 27.1 bits (61), Expect = 5.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K +EC+ C K + R L H H+G+K
Sbjct: 11 KPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 26.7 bits (60), Expect = 8.3
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K Y+C VC +S + L H+ H
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 55.3 bits (134), Expect = 7e-10
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECG 1126
+ +GE+P+ CE CG F S H R H+GE+P S G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 53.3 bits (129), Expect = 3e-09
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCG 507
+ +GE+PF CE CG + H R H+GE+P + G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 52.2 bits (126), Expect = 6e-09
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECG 753
+ +GE+P+ CE CG F T H R H+GE+P S G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 48.3 bits (116), Expect = 2e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACD 1300
+ + + F CE CGKGF H+R H+G KP
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 46.8 bits (112), Expect = 6e-07
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 436 AHMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCEVCG 479
+ +GE+P C CGK H +H+GE+P G G
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 46.4 bits (111), Expect = 1e-06
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCG 1331
+G KP+ C+ C K F S H++ H K G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 44.1 bits (105), Expect = 5e-06
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACEICG 725
+GE+ + C CGK + H +H+GE+P G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 42.5 bits (101), Expect = 2e-05
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +GE+P+ C ECG+ F S H + H+G K
Sbjct: 1 GSSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 41.8 bits (99), Expect = 4e-05
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 1055 QHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYACEFCG 1098
+ SGEK C CGK + H +H+GE+P G
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 40.2 bits (95), Expect = 1e-04
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GE+PF C ECG+ F S H + H+G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG 37
Score = 39.5 bits (93), Expect = 3e-04
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GE+P+ C CG F H + H+
Sbjct: 1 GSSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS 36
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K + C+ CG S +H R H+GE+P
Sbjct: 9 GEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.079
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C + + SQ H SH+G KP
Sbjct: 14 KCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.16
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S +P +C+ CGK F + H +R H G K
Sbjct: 6 SGSGEKPFKCEECGKGFYTNSQCYSH-QRSHSGEK 39
Score = 29.8 bits (68), Expect = 0.71
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCD 607
+C CG F T H +H+G K
Sbjct: 14 KCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.84
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 317 RVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K F+C CG F + + H SH+G K S
Sbjct: 5 SSGSGEKP-----FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 27.9 bits (63), Expect = 3.6
Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ +G K +KC+ C G+ + H+ H
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35
Score = 27.5 bits (62), Expect = 4.0
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K F+C C K + + H +H+GEK
Sbjct: 11 KPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.2 bits (134), Expect = 7e-10
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+P+ C+ CG SF +S L H H E+P S
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 54.8 bits (133), Expect = 9e-10
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+PF C++CG ++ + L H HT E+P +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 53.7 bits (130), Expect = 2e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+P+ C+ICG +F + L H H E+P S
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 49.8 bits (120), Expect = 4e-08
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACD 1300
+ + F C++CGK F + L H VHT KP
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 49.4 bits (119), Expect = 7e-08
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KP+ CD+C K F +S LN H +H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35
Score = 49.0 bits (118), Expect = 9e-08
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCE 476
+ TGE+P C ICGK G+ L H + HT E+P G
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 45.9 bits (110), Expect = 1e-06
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGKKMRGK--LKEHMLTHTGERPYACE 722
TGE+ + C ICGK G+ L H + HT E+P
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 44.8 bits (107), Expect = 3e-06
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+P+ C CG+SF RS + H H K
Sbjct: 1 GSSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39
Score = 42.9 bits (102), Expect = 1e-05
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +GEK C ICGK GR LN H + HT E+P
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 42.9 bits (102), Expect = 1e-05
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+P+ C+ CG SF R N H HT
Sbjct: 1 GSSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHT 36
Score = 40.2 bits (95), Expect = 1e-04
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K + C ICG +S L H +HT E+P
Sbjct: 9 GEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+PF C CG+SF RS + H H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA 37
Score = 32.5 bits (75), Expect = 0.063
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K +KCD+C + L RH M H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35
Score = 32.1 bits (74), Expect = 0.087
Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCD 607
+C+ICG F + L H HT K
Sbjct: 14 KCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 30.5 bits (70), Expect = 0.36
Identities = 13/46 (28%), Positives = 16/46 (34%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K F+C CG F R+ + H HT K S
Sbjct: 4 GSSGTGEKP-----FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 30.5 bits (70), Expect = 0.38
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P +C CGK F + L +H VH K
Sbjct: 6 SGTGEKPFKCDICGKSFCGRSRLNRHS-MVHTAEK 39
Score = 29.8 bits (68), Expect = 0.57
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C + +S+L H HT KP
Sbjct: 14 KCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 28.6 bits (65), Expect = 2.0
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +CD+CGKSF L H
Sbjct: 1 GSSGSSGTG-EKPFKCDICGKSFCGRSRLNRH 31
Score = 28.2 bits (64), Expect = 2.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 1682 CDTCGKSFTGNNHLKRH 1698
CD CGKSF G + L RH
Sbjct: 15 CDICGKSFCGRSRLNRH 31
Score = 27.8 bits (63), Expect = 3.5
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K F+C C K++ R L H HT EK
Sbjct: 11 KPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 27.1 bits (61), Expect = 6.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+S TG KP+ C IC S+ L RH H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.8 bits (133), Expect = 8e-10
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ +GE+PY C CG +K + L H R H GE+ S
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 54.1 bits (131), Expect = 1e-09
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 462 DHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ +GE+P+ C CG YK + L H R HTGE+ +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 53.3 bits (129), Expect = 3e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ +GE+PY C CG +K + L H R H GE+ S
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 48.7 bits (117), Expect = 1e-07
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACD 1300
+ + + + C CGKG+ ++ L+ H+RVHTG K
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 46.8 bits (112), Expect = 6e-07
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 436 AHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGC 475
+ +GE+P C CGK K R L H HTGE+ G
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 46.4 bits (111), Expect = 7e-07
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G KPY C C K + ++ L+ H+++H
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35
Score = 44.8 bits (107), Expect = 3e-06
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
+GE+ Y C CGK K R L H HTGE+
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 43.7 bits (104), Expect = 7e-06
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +GE+PY C ECG+ + R H + H G K
Sbjct: 1 GSSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 41.4 bits (98), Expect = 5e-05
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ SGEK C CGK K R L+ H HTGE+
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GE+PY C CG + R + H + HT
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHT 36
Score = 39.1 bits (92), Expect = 4e-04
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GE+P+ C ECG+ + R H + H G
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG 37
Score = 36.7 bits (86), Expect = 0.002
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG + + +L H R+HTGE+
Sbjct: 9 GEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 32.5 bits (75), Expect = 0.073
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S +P++C CGK +K + L H +RVH G K
Sbjct: 6 SGSGEKPYKCVECGKGYKRRLDLDFH-QRVHTGEK 39
Score = 31.0 bits (71), Expect = 0.23
Identities = 9/30 (30%), Positives = 11/30 (36%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C Y + L H HTG K
Sbjct: 14 KCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 30.6 bits (70), Expect = 0.32
Identities = 12/45 (26%), Positives = 16/45 (35%), Gaps = 5/45 (11%)
Query: 317 RVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG + R + H HTG K S
Sbjct: 5 SSGSGEKP-----YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 30.2 bits (69), Expect = 0.52
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCD 607
+C CG + + L H HTG K
Sbjct: 14 KCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 28.3 bits (64), Expect = 2.2
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 594 DHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ +G K YKC C GY L H+ H
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35
Score = 28.3 bits (64), Expect = 2.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K ++C C K Y R+ L+ H HTGEK
Sbjct: 11 KPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.8 bits (133), Expect = 8e-10
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSE 1124
+ TGE+PY C CG F+ SYL H R H GE+P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45
Score = 54.1 bits (131), Expect = 2e-09
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG +++ YL+ H R HTGE+P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 54.1 bits (131), Expect = 2e-09
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSE 751
+ TGE+PY C CG F+ YL H R H GE+P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45
Score = 46.4 bits (111), Expect = 9e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F YL H+R+HTG KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 9e-07
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K F S L+ H+++H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35
Score = 42.9 bits (102), Expect = 1e-05
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGKKMRGK--LKEHMLTHTGERPYACE 722
TGE+ Y C+ CGK R L H HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 3e-05
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C+ECG+ F S S H + H G K
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEK 39
Score = 41.0 bits (97), Expect = 8e-05
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +GEK C+ CGK R L+ H HTGE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 7e-04
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY CN CG F + H + HT
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHT 36
Score = 37.9 bits (89), Expect = 8e-04
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C+ECG+ F S S H + H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG 37
Score = 36.7 bits (86), Expect = 0.003
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCH 450
G+K Y C CG R S L H RIHTGE+P
Sbjct: 9 GEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.081
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F+ +L +H+ R+H G K
Sbjct: 6 SGTGEKPYKCNECGKVFRHNSYLSRHQ-RIHTGEK 39
Score = 30.6 bits (70), Expect = 0.40
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICH 46
+C+ C + S L H HTG KP
Sbjct: 14 KCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.59
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+CN CG +F L H HTG K
Sbjct: 14 KCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.4
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F ++++ H HTG K S
Sbjct: 2 SS-GSSGTGEKP-----YKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 3.7
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC+ C + +L RH+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35
Score = 26.7 bits (60), Expect = 8.5
Identities = 12/47 (25%), Positives = 16/47 (34%), Gaps = 4/47 (8%)
Query: 171 QHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
G +K ++C C K + L H HTGEK
Sbjct: 2 SSGSS-GTG---EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 9.3
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
++C+ CGK F N++L RH
Sbjct: 13 YKCNECGKVFRHNSYLSRH 31
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.8 bits (133), Expect = 8e-10
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ CE CG Y K+ L +H + HTGERP +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 54.8 bits (133), Expect = 8e-10
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY CE CG + K L +H + H GERP S
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 53.7 bits (130), Expect = 2e-09
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY CE CG + +K+ L +H + H GERP S
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 49.1 bits (118), Expect = 1e-07
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + CE CGKG+ K L+ H++VHTG +P
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 48.7 bits (117), Expect = 1e-07
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K + K L++H+K+H
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35
Score = 44.1 bits (105), Expect = 6e-06
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE+ Y C CGK + L H HTGERP
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 42.1 bits (100), Expect = 2e-05
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C +CG+ + ++ +H K H G +
Sbjct: 1 GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39
Score = 40.6 bits (96), Expect = 9e-05
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C CG + ++ ++H K HT
Sbjct: 1 GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHT 36
Score = 39.4 bits (93), Expect = 3e-04
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 1109 IHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C +CG+ + ++ +H K H G
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG 37
Score = 39.0 bits (92), Expect = 3e-04
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ +GEK C CGK + L+ H HTGERP
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 37.1 bits (87), Expect = 0.001
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCH 450
G+K Y C+ CG K NL H ++HTGERP
Sbjct: 9 GEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 31.7 bits (73), Expect = 0.14
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICH 46
+C C Y+SK L H HTG +P
Sbjct: 14 KCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 31.7 bits (73), Expect = 0.15
Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C+ CGK + S+ +L H+ +VH G +
Sbjct: 6 SGTGEKPYKCEKCGKGYNSKFNLDMHQ-KVHTGER 39
Score = 30.6 bits (70), Expect = 0.30
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C CG + +K+ L H HTG +
Sbjct: 14 KCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 30.2 bits (69), Expect = 0.47
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC+ C GY+S +L H+ H
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35
Score = 29.0 bits (66), Expect = 1.4
Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG + S+ ++ H HTG + S
Sbjct: 4 GSSGTGEKP-----YKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 27.5 bits (62), Expect = 3.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
P+ CE C K + SK NL +H
Sbjct: 12 PYKCEKCGKGYNSKFNLDMH 31
Score = 26.7 bits (60), Expect = 8.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLH 1673
P+ C C K + +KFNL H+K+H
Sbjct: 12 PYKCEKCGKGYNSKFNLDMHQKVH 35
Score = 26.3 bits (59), Expect = 9.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K ++C C K Y S+ L+ H HTGE+
Sbjct: 11 KPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.9 bits (133), Expect = 8e-10
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P C CG ++ + L VH R HTGE P +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 54.5 bits (132), Expect = 1e-09
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+P+ C CG SF S L +H R H GE P S
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 52.9 bits (128), Expect = 5e-09
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+P+ C CG +F L VH R H GE P S
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 45.6 bits (109), Expect = 1e-06
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KP+ C C K F+ S L +H+++H
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35
Score = 45.6 bits (109), Expect = 2e-06
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + C CGK F L H+R+HTG P
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE+ + C CGK +L H HTGE P
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+P+ C ECG+SF+ S +H + H G
Sbjct: 1 GSSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 38.3 bits (90), Expect = 6e-04
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+P+ C CG SF+ +H + HT
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHT 36
Score = 38.3 bits (90), Expect = 7e-04
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ +GEK C CGK +L H HTGE P
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P C ECG+SF+ S +H + H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG 37
Score = 35.6 bits (83), Expect = 0.005
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K + C+ CG S L H RIHTGE P
Sbjct: 9 GEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 32.9 bits (76), Expect = 0.056
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +PH+C+ CGK F L+ H+ R+H G
Sbjct: 6 SGTGEKPHECRECGKSFSFNSQLIVHQ-RIHTGEN 39
Score = 31.4 bits (72), Expect = 0.21
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C +S SQL+ H HTG P
Sbjct: 14 ECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 28.7 bits (65), Expect = 1.7
Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC CG F+ L H HTG
Sbjct: 14 ECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 28.7 bits (65), Expect = 1.7
Identities = 12/46 (26%), Positives = 14/46 (30%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K EC CG F + + H HTG S
Sbjct: 4 GSSGTGEKP-----HECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 54.8 bits (133), Expect = 9e-10
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTC 1122
+ TGE+PY C C +F KS L +H R H GE +
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 53.6 bits (130), Expect = 2e-09
Identities = 17/41 (41%), Positives = 19/41 (46%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMC 749
+ TGE+PY C C F TK L VH R H GE
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 53.3 bits (129), Expect = 3e-09
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVC 503
+ TGE+P+ C C + K L VH R HTGE
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 49.0 bits (118), Expect = 1e-07
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K F KS L +H++ H
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 46.7 bits (112), Expect = 6e-07
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGC 475
+ TGE+P C+ C K K L H THTGE
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 45.5 bits (109), Expect = 2e-06
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C C K F K L H+R HTG +
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 44.8 bits (107), Expect = 3e-06
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C+EC ++F +S +H + H G
Sbjct: 1 GSSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES 39
Score = 43.6 bits (104), Expect = 7e-06
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGKKMRGK--LKEHMLTHTGERPYAC 721
TGE+ Y C+ C K K L H THTGE +
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 43.2 bits (103), Expect = 1e-05
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY CN C +F + +H + HT
Sbjct: 1 GSSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHT 36
Score = 40.2 bits (95), Expect = 1e-04
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 1109 IHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C+EC ++F +S +H + H G
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG 37
Score = 39.8 bits (94), Expect = 2e-04
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYAC 1094
+ +GEK C+ C K + L H THTGE +
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C C KSNL H R HTGE
Sbjct: 9 GEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 34.0 bits (79), Expect = 0.020
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
ECN C F TK L H THTG
Sbjct: 14 ECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 32.8 bits (76), Expect = 0.047
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC+ C +++KS L+ H +HTG
Sbjct: 14 ECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 29.4 bits (67), Expect = 0.95
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C C K F ++ +L+ H+ R H G
Sbjct: 6 SGTGEKPYECNECQKAFNTKSNLMVHQ-RTHTGES 39
Score = 27.8 bits (63), Expect = 2.7
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
Query: 317 RVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVC 360
G K +EC C F +++++ H +HTG
Sbjct: 5 SSGTGEKP-----YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 27.8 bits (63), Expect = 2.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K +EC C K + ++ L H HTGE G
Sbjct: 11 KPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 26.7 bits (60), Expect = 7.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
P+ C C K F +K NL VH
Sbjct: 12 PYECNECQKAFNTKSNLMVH 31
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 54.8 bits (133), Expect = 9e-10
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGERP C CG ++ +L H R HTGE+P +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 54.1 bits (131), Expect = 1e-09
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGERP+ C CG SF ++L H R H GE+P S
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 51.7 bits (125), Expect = 1e-08
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGERP+ C CG +F +L H R H GE+P S
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 2e-07
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ R C CGK FIQ +L +H+R+HTG KP
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 1e-06
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG +P+ C+ C K F Q + L H+++H
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35
Score = 42.9 bits (102), Expect = 1e-05
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGER + C+ CGK L +H HTGE+P
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 41.3 bits (98), Expect = 6e-05
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GERP+ C+ECG+SF + H + H G K
Sbjct: 1 GSSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEK 39
Score = 39.8 bits (94), Expect = 2e-04
Identities = 14/36 (38%), Positives = 16/36 (44%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGERP+ CN CG SF H + HT
Sbjct: 1 GSSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHT 36
Score = 38.6 bits (91), Expect = 4e-04
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYACE 1095
+ +GE+ C+ CGK L +H HTGE+P
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 6e-04
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GERP C+ECG+SF + H + H G
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG 37
Score = 34.4 bits (80), Expect = 0.015
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G++ + C CG ++L H RIHTGE+P
Sbjct: 9 GERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.036
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ RPH+C CGK F HL+QH +R+H G K
Sbjct: 6 SGTGERPHKCNECGKSFIQSAHLIQH-QRIHTGEK 39
Score = 30.6 bits (70), Expect = 0.36
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C+ C + + L+ H HTG KP
Sbjct: 14 KCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.49
Identities = 13/46 (28%), Positives = 16/46 (34%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G + +C CG FI H+ H HTG K S
Sbjct: 4 GSSGTGERP-----HKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 1.4
Identities = 11/30 (36%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+CN CG F L H HTG K
Sbjct: 14 KCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 1.8
Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ ++ +C+ CGKSF ++ HL H
Sbjct: 1 GSSGSSGTG-ERPHKCNECGKSFIQSAHLIQH 31
Score = 27.5 bits (62), Expect = 4.7
Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG + +KC+ C + HL +H+ H
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35
Score = 27.1 bits (61), Expect = 5.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
H+C+ CGKSF + HL +H
Sbjct: 13 HKCNECGKSFIQSAHLIQH 31
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 54.8 bits (133), Expect = 9e-10
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ + E+P+ CE CG Y + L +H R H GE+ +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 54.8 bits (133), Expect = 1e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ + E+PY CE CG + + L +H R H GE+ S
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 53.3 bits (129), Expect = 3e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ + E+PY CE CG + + L +H R H GE+ S
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 50.2 bits (121), Expect = 4e-08
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + + CE CGKG+ ++ L+ H+RVH G K
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 48.6 bits (117), Expect = 1e-07
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+ KPY C+ C K + ++ L++H+++H
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35
Score = 47.5 bits (114), Expect = 3e-07
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 436 AHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGC 475
+ + E+P C CGK R L H H GE+ G
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 44.4 bits (106), Expect = 4e-06
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
+ E+ Y C CGK R L H H GE+
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 42.9 bits (102), Expect = 1e-05
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G + E+PY C +CG+ + R +H + H G K
Sbjct: 1 GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 41.7 bits (99), Expect = 4e-05
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ S EK C CGK R L+ H H GE+
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+ E+PY C CG + R ++H + H
Sbjct: 1 GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHM 36
Score = 39.4 bits (93), Expect = 2e-04
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+ E+P+ C +CG+ + R +H + H G
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG 37
Score = 37.5 bits (88), Expect = 0.001
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
+K Y C+ CG + NL H R+H GE+
Sbjct: 9 VEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 32.9 bits (76), Expect = 0.048
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S +P++C+ CGK + + +L H +RVH+G K
Sbjct: 6 SGSVEKPYKCEDCGKGYNRRLNLDMH-QRVHMGEK 39
Score = 30.9 bits (71), Expect = 0.26
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C Y+ + L H H G K
Sbjct: 14 KCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 30.5 bits (70), Expect = 0.40
Identities = 8/30 (26%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C CG + + L H H G K
Sbjct: 14 KCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 28.6 bits (65), Expect = 1.5
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ + K YKC+ C GY+ +L H+ H
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35
Score = 28.6 bits (65), Expect = 1.9
Identities = 10/46 (21%), Positives = 15/46 (32%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
K ++C CG + R ++ H H G K S
Sbjct: 4 GSSGSVEKP-----YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 27.8 bits (63), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
P+ CE C K + + NL +H
Sbjct: 12 PYKCEDCGKGYNRRLNLDMH 31
Score = 27.5 bits (62), Expect = 4.2
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C+ CGK + R +L H
Sbjct: 1 GSSGSSGSV-EKPYKCEDCGKGYNRRLNLDMH 31
Score = 27.1 bits (61), Expect = 6.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLH 1673
P+ C C K + + NL H+++H
Sbjct: 12 PYKCEDCGKGYNRRLNLDMHQRVH 35
Score = 27.1 bits (61), Expect = 6.5
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 1036 GNKCHICKVCGA--KIKGNLQQHMETHSGEK 1064
K + C+ CG + NL H H GEK
Sbjct: 9 VEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK 39
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 45
Score = 54.9 bits (133), Expect = 1e-09
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TG++PF C CG +++ K L H R HTGE+ +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 53.7 bits (130), Expect = 2e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TG++P+ C CG SF+ K L H R H GE+ S
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 52.5 bits (127), Expect = 6e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TG++P+ C CG +F+ K L H R H GE+ S
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 47.5 bits (114), Expect = 3e-07
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFIC 1327
TG KP+ C C K F K L H+++H K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 47.2 bits (113), Expect = 4e-07
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + F C CGK F K L H+R+HTG K
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 44.1 bits (105), Expect = 5e-06
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TG++ + C CGK + +G L H HTGE+
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 42.9 bits (102), Expect = 1e-05
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G G++P+ C+ CG+SF A+ H + H G K
Sbjct: 1 GSSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEK 39
Score = 41.4 bits (98), Expect = 5e-05
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TG++P+ C +CG SF A+ H + HT
Sbjct: 1 GSSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHT 36
Score = 40.6 bits (96), Expect = 9e-05
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYAC 1094
+ +G+K C CGK R + L H HTGE+
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 1109 IHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
G++PF C+ CG+SF A+ H + H G
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG 37
Score = 38.7 bits (91), Expect = 5e-04
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G K + C CG R K NL H RIHTGE+
Sbjct: 9 GQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 33.7 bits (78), Expect = 0.028
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC HC + +K L+ H HTG K
Sbjct: 14 ECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 32.5 bits (75), Expect = 0.077
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 317 RVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K FEC HCG F ++ ++ H HTG K+ S
Sbjct: 5 SSGTGQKP-----FECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 31.7 bits (73), Expect = 0.11
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P +C CGK F+++ +LV H+ R+H G K
Sbjct: 6 SGTGQKPFECTHCGKSFRAKGNLVTHQ-RIHTGEK 39
Score = 31.4 bits (72), Expect = 0.19
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC CG F K L H HTG K
Sbjct: 14 ECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 29.8 bits (68), Expect = 0.55
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K FEC HC K++ ++ L H HTGEK
Sbjct: 11 KPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 29.8 bits (68), Expect = 0.73
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
PF C HC K F +KGNL H
Sbjct: 12 PFECTHCGKSFRAKGNLVTH 31
Score = 26.7 bits (60), Expect = 9.1
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ K +C CGKSF +L +H
Sbjct: 1 GSSGSSGTG-QKPFECTHCGKSFRAKGNLVTH 31
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Length = 46
Score = 54.4 bits (132), Expect = 1e-09
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+P+ C CG SF S L H R H GE+P S
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 2e-09
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+P+ C CG +F L H R H GE+P S
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 5e-09
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVC 503
+ TGE+PF C CG ++ LA H R HTGE+P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 9e-07
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 437 HMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCE 476
TGE+P C CGK + +L H HTGE+P G
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 46.3 bits (111), Expect = 9e-07
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KP+ C C K F+ S L H+++H
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35
Score = 46.0 bits (110), Expect = 1e-06
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + F C CGK F L H+R+HTG KP
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 4e-06
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ + C CGK + +L H HTGE+P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 2e-05
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+P+ C+ECG+SF+ S + H + H G K
Sbjct: 1 GSSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK 39
Score = 39.8 bits (94), Expect = 2e-04
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACE 1095
+ +GEK C CGK + +L H HTGE+P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 3e-04
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+PF C+ECG+SF+ S + H + H G
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG 37
Score = 38.6 bits (91), Expect = 5e-04
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+P+ C CG SF+ H + HT
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHT 36
Score = 37.5 bits (88), Expect = 0.001
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K + C CG + S L H RIHTGE+P
Sbjct: 9 GEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.12
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C +S SQL H HTG KP
Sbjct: 14 ECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.13
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P +C CGK F L H+ R+H G K
Sbjct: 6 SGTGEKPFECAECGKSFSISSQLATHQ-RIHTGEK 39
Score = 30.2 bits (69), Expect = 0.46
Identities = 11/30 (36%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC CG F+ L H HTG K
Sbjct: 14 ECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.63
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 317 RVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K FEC CG F + +A H HTG K S
Sbjct: 5 SSGTGEKP-----FECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 4.7
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K FECA C K++ L H HTGEK
Sbjct: 11 KPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 1e-09
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGERP+ C VCG + + L H + HTGE+P +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 54.0 bits (131), Expect = 2e-09
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGERPY C CG +F D+S L H + H GE+P S
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 7e-09
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGERPY C +CG F + L H + H GE+P S
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 2e-07
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG +PY C +C K FT +S L H+K+H
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35
Score = 46.3 bits (111), Expect = 7e-07
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 436 AHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGC 475
+ TGERP C +CGK R L H HTGE+P G
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 9e-07
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ R + C VCGK F + L +H+++HTG KP
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 2e-06
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGER Y C +CGK R L +H HTGE+P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 44.0 bits (105), Expect = 7e-06
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GERPY+C+ CG++F RS H K H G K
Sbjct: 1 GSSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEK 39
Score = 41.7 bits (99), Expect = 3e-05
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ +GE+ C +CGK R L +H HTGE+P
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 9e-05
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGERPY+C CG +F R H K HT
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHT 36
Score = 39.0 bits (92), Expect = 3e-04
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GERP+ C+ CG++F RS H K H G
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG 37
Score = 37.5 bits (88), Expect = 0.001
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G++ Y+C +CG +SNL H +IHTGE+P
Sbjct: 9 GERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.23
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C C ++ +S L+ H HTG KP
Sbjct: 14 ICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.25
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ RP+ C CGK F + +L++H+ ++H G K
Sbjct: 6 SGTGERPYICTVCGKAFTDRSNLIKHQ-KIHTGEK 39
Score = 30.5 bits (70), Expect = 0.39
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
C +CG F + L H HTG K
Sbjct: 14 ICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.68
Identities = 12/49 (24%), Positives = 17/49 (34%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G + + C CG F R+++ H HTG K S
Sbjct: 2 SS-GSSGTGERP-----YICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 5.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
P+IC C K FT + NL H
Sbjct: 12 PYICTVCGKAFTDRSNLIKH 31
Score = 27.1 bits (61), Expect = 6.7
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
+ + C C K + R L H HTGEK
Sbjct: 11 RPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 7.8
Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG + Y C VC ++ +L +H+ H
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 54.5 bits (132), Expect = 1e-09
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY CE CG F + L H H GE+P S
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 3e-09
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 462 DHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ CE CG + + L H HTGE+P +
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 51.8 bits (125), Expect = 9e-09
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY CE CG F + L H H GE+P S
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 49.5 bits (119), Expect = 6e-08
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + CE CGKGFI +R L H VHTG KP
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 3e-07
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K F + L H +H
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35
Score = 46.4 bits (111), Expect = 7e-07
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCE 476
+ TGE+P C CGK R L H + HTGE+P G
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 44.5 bits (106), Expect = 4e-06
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C CGK R L H + HTGE+P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 2e-05
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C ECG+ F R H H G K
Sbjct: 1 GSSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK 39
Score = 40.6 bits (96), Expect = 9e-05
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACE 1095
+ +GEK C CGK R L H + HTGE+P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 2e-04
Identities = 13/36 (36%), Positives = 14/36 (38%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C CG F R H HT
Sbjct: 1 GSSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHT 36
Score = 37.9 bits (89), Expect = 9e-04
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C ECG+ F R H H G
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG 37
Score = 36.8 bits (86), Expect = 0.002
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C+ CG + +L H +HTGE+P
Sbjct: 9 GEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.28
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C+ CGK F +R L H VH G K
Sbjct: 6 SGTGEKPYKCEECGKGFICRRDLYTHH-MVHTGEK 39
Score = 30.6 bits (70), Expect = 0.35
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C + + L H HTG KP
Sbjct: 14 KCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.45
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C CG F + L H HTG K
Sbjct: 14 KCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.50
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 594 DHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC+ C G+ + L H M H
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35
Score = 28.3 bits (64), Expect = 2.1
Identities = 14/46 (30%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG FI R + H HTG K S
Sbjct: 4 GSSGTGEKP-----YKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 7.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K ++C C K ++ R L H HTGEK
Sbjct: 11 KPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.5 bits (132), Expect = 1e-09
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG ++ + LA+H H+GE+P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 54.1 bits (131), Expect = 2e-09
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG +F+ +S L IH H+GE+P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 52.5 bits (127), Expect = 5e-09
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG F+ + L +H H+GE+P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 47.5 bits (114), Expect = 3e-07
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K F +S+L IH+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35
Score = 44.8 bits (107), Expect = 3e-06
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F + L H+ H+G KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 43.7 bits (104), Expect = 9e-06
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE+ Y C+ CGK + R L H TH+GE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 42.9 bits (102), Expect = 1e-05
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C+ECG++F ARS+ ++H H+G K
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK 39
Score = 41.4 bits (98), Expect = 5e-05
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY CN CG +F AR + +H H+
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHS 36
Score = 41.4 bits (98), Expect = 5e-05
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYAC 1094
+ +GEK C+ CGK R R L H TH+GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 39.1 bits (92), Expect = 3e-04
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C+ECG++F ARS+ ++H H+G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG 37
Score = 37.5 bits (88), Expect = 0.001
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG R +S+L H H+GE+P
Sbjct: 9 GEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.052
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+CN CG F + +L H TH+G K
Sbjct: 14 KCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.15
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C+ C + ++S L H +H+G KP
Sbjct: 14 KCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.50
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F+++ L H+ H G K
Sbjct: 6 SGTGEKPYKCNECGKAFRARSSLAIHQ-ATHSGEK 39
Score = 29.8 bits (68), Expect = 0.74
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F +R+ +A H +H+G K S
Sbjct: 4 GSSGTGEKP-----YKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 27.9 bits (63), Expect = 3.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K ++C C K + +R L H H+GEK
Sbjct: 11 KPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 26.7 bits (60), Expect = 7.1
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC+ C + + L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 1e-09
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG +F D+S L H + H GE+P S
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 9e-09
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG F + L H + H GE+P S
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 2e-08
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 462 DHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVC 503
+ TGE+P+ C CG + + L H + HTGE+P
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 3e-07
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C C K FT +S L H+K+H
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35
Score = 47.1 bits (113), Expect = 5e-07
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCE 476
+ TGE+P C CGK R L H HTGE+P G
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 46.3 bits (111), Expect = 8e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F + L H+++HTG KP
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 3e-06
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C CGK R L H HTGE+P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 6e-06
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C+ECG++F RS H K H G K
Sbjct: 1 GSSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 41.3 bits (98), Expect = 5e-05
Identities = 14/36 (38%), Positives = 16/36 (44%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C CG +F R H K HT
Sbjct: 1 GSSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHT 36
Score = 41.0 bits (97), Expect = 8e-05
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACE 1095
+ +GEK C CGK R L H HTGE+P
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 2e-04
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C+ECG++F RS H K H G
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG 37
Score = 37.5 bits (88), Expect = 0.001
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG +SNL H +IHTGE+P
Sbjct: 9 GEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.17
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F + +L H+ ++H G K
Sbjct: 6 SGTGEKPYRCAECGKAFTDRSNLFTHQ-KIHTGEK 39
Score = 30.9 bits (71), Expect = 0.24
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C C ++ +S L H HTG KP
Sbjct: 14 RCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.60
Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K + C CG F R+++ H HTG K S
Sbjct: 4 GSSGTGEKP-----YRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.68
Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
C CG F + L H HTG K
Sbjct: 14 RCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 2.0
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K + CA C K + R L H HTGEK
Sbjct: 11 KPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 28.2 bits (64), Expect = 2.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
P+ C C K FT + NL H
Sbjct: 12 PYRCAECGKAFTDRSNLFTH 31
Score = 27.1 bits (61), Expect = 5.4
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 594 DHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K Y+C C ++ +L H+ H
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35
Score = 26.7 bits (60), Expect = 9.2
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C CGK+F +L +H
Sbjct: 1 GSSGSSGTG-EKPYRCAECGKAFTDRSNLFTH 31
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
early growth response protein 1, TGFB-inducible early
growth response protein 1; NMR {Homo sapiens}
Length = 72
Score = 55.1 bits (133), Expect = 1e-09
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 1076 RGRLNEHMLTHTGERPYACEF--CGSSFKDKSYLRIHIRKHNGERPFTCS--ECGQSFAA 1131
+ + + R + C CG ++ S+L+ H R H GE+PF+CS C + FA
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 1132 RSAFSLHLKKH 1142
S H + H
Sbjct: 62 SDELSRHRRTH 72
Score = 52.4 bits (126), Expect = 1e-08
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Query: 457 RGKLKDHMLTHTGERPFGCEV--CGSTYKYKYYLAVHMRKHTGERPYVCNY--CGHSFAA 512
+ + R C CG TY +L H R HTGE+P+ C++ C FA
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 513 RPAFNLHLKRH 523
+ H + H
Sbjct: 62 SDELSRHRRTH 72
Score = 50.8 bits (122), Expect = 4e-08
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Query: 703 RGKLKEHMLTHTGERPYACEI--CGGTFKTKWYLGVHMRKHNGERPYMCS--ECGQSFAA 758
+ + R + C CG T+ +L H R H GE+P+ CS C + FA
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 759 RSAFSLHLKKH 769
S H + H
Sbjct: 62 SDELSRHRRTH 72
Score = 50.1 bits (120), Expect = 9e-08
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 1255 RLKTHMLIHANNRVFTCEV--CGKGFIQKRYLEEHKRVHTGYKPYACDL--CSKQFTQKS 1310
+ + R C CGK + + +L+ H R HTG KP++C C ++F +
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 1311 TLNIHRKLH 1319
L+ HR+ H
Sbjct: 64 ELSRHRRTH 72
Score = 48.9 bits (117), Expect = 2e-07
Identities = 22/71 (30%), Positives = 26/71 (36%), Gaps = 6/71 (8%)
Query: 431 KSNLKAHMRIHTGERPVCCHI--CGKKL--RGKLKDHMLTHTGERPFGCEV--CGSTYKY 484
S + R C CGK LK H THTGE+PF C C +
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 485 KYYLAVHMRKH 495
L+ H R H
Sbjct: 62 SDELSRHRRTH 72
Score = 48.2 bits (115), Expect = 4e-07
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
Query: 677 KGSLKEHMIVHTGERKYCCHI--CGK--KMRGKLKEHMLTHTGERPYAC--EICGGTFKT 730
I + R + C CGK LK H THTGE+P++C + C F
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 731 KWYLGVHMRKH 741
L H R H
Sbjct: 62 SDELSRHRRTH 72
Score = 38.1 bits (89), Expect = 0.002
Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Query: 172 HRKVVHMGIKQKKKFECAH--CSKTYLSRVGLEDHINNHTGEKGHIC--EICNRDFYSDA 227
+ + + C+H C KTY L+ H HTGEK C + C R F
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 228 MLKRHLVKH 236
L RH H
Sbjct: 64 ELSRHRRTH 72
Score = 36.6 bits (85), Expect = 0.004
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 417 GDKCYLCKI--CGARVK--SNLKAHMRIHTGERPVCCHI--CGKKLR--GKLKDHMLTH 467
+ ++C CG S+LKAH R HTGE+P C C ++ +L H TH
Sbjct: 14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 35.8 bits (83), Expect = 0.009
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Query: 1287 HKRVHTGYKPYACDL--CSKQFTQKSTLNIHRKLHLNIKDFICDL--CGAKF 1334
+ + + + C C K + + S L H + H K F C C +F
Sbjct: 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRF 59
Score = 32.7 bits (75), Expect = 0.13
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 270 PLCKKTYQSAKGMRLHIREVHSKVRPHQC--KGCGKYFKSQRHLVQHERR 317
P C KTY + ++ H R H+ +P C KGC + F L +H R
Sbjct: 23 PGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFARSDELSRHRRT 71
Score = 32.4 bits (74), Expect = 0.14
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 11/75 (14%)
Query: 342 RTHIADHMTSHTGIKNHVCSI--CQSTYTTARGLKRHNKNHLREAGVLRADEMYKCD--K 397
+ + + I++H+CS C TY + LK H + H E + + C
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGE-------KPFSCSWKG 54
Query: 398 CDKLFIEQSEMVQHR 412
C++ F E+ +HR
Sbjct: 55 CERRFARSDELSRHR 69
Score = 32.0 bits (73), Expect = 0.19
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 330 FECFH--CGAKFISRTHIADHMTSHTGIKNHVCSI--CQSTYTTARGLKRHNKNH 380
C H CG + +H+ H +HTG K CS C+ + + L RH + H
Sbjct: 18 HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 32.0 bits (73), Expect = 0.23
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 17 CHH--CAMRYSSKSQLLDHLNSHTGLKPYICHI--CKNSYVAAKGLKRHLKRH 65
C H C Y S L H +HTG KP+ C C+ + + L RH + H
Sbjct: 20 CSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 31.6 bits (72), Expect = 0.33
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 10/67 (14%)
Query: 290 HSKVRPHQCK--GCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFH--CGAKFISRTHI 345
S++R H C GCGK + HL H R H G K F C C +F +
Sbjct: 12 SSRIRSHICSHPGCGKTYFKSSHLKAH-TRTHTGEK-----PFSCSWKGCERRFARSDEL 65
Query: 346 ADHMTSH 352
+ H +H
Sbjct: 66 SRHRRTH 72
Score = 31.6 bits (72), Expect = 0.34
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 582 CGALFATKYTLQDHMNTHTGNK-YKCDV--CDNGYSSLKHLKRHKMKH 626
CG + L+ H THTG K + C C+ ++ L RH+ H
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 31.2 bits (71), Expect = 0.44
Identities = 17/62 (27%), Positives = 22/62 (35%), Gaps = 11/62 (17%)
Query: 974 RKKFKCDV--CGNGYTSVKHLKRHKIKHMKESGELPPSMIHKC--PTCYKIFTENHALKK 1029
+ C CG Y HLK H H +GE P C C + F + L +
Sbjct: 15 IRSHICSHPGCGKTYFKSSHLKAHTRTH---TGEKP----FSCSWKGCERRFARSDELSR 67
Query: 1030 HL 1031
H
Sbjct: 68 HR 69
Score = 30.8 bits (70), Expect = 0.49
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 734 LGVHMRKHNGERPYMCS--ECGQSFAARSAFSLHLKKHAGFK 773
+ R ++CS CG+++ S H + H G K
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEK 46
Score = 30.8 bits (70), Expect = 0.55
Identities = 7/39 (17%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 488 LAVHMRKHTGERPYVCNY--CGHSFAARPAFNLHLKRHT 524
+ + R ++C++ CG ++ H + HT
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT 43
Score = 30.0 bits (68), Expect = 0.94
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Query: 1104 KSYLRIHIRKHNGERPFTCS--ECGQSFAARSAFSLHLKKHAG 1144
S + R CS CG+++ S H + H G
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTG 44
Score = 30.0 bits (68), Expect = 0.95
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 1241 YPCTV--CSKNLSSPYRLKTHMLIHANNRVFTCEV--CGKGFIQKRYLEEHKRVH 1291
+ C+ C K LK H H + F+C C + F + L H+R H
Sbjct: 18 HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 30.0 bits (68), Expect = 1.1
Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Query: 1650 PHTCPV--CKKIFVNKFNLTTHKKLHLPMNRNHQCD--TCGKSFTGNNHLKRH 1698
H C C K + +L H + H + C C + F ++ L RH
Sbjct: 17 SHICSHPGCGKTYFKSSHLKAHTRTHTG-EKPFSCSWKGCERRFARSDELSRH 68
Score = 30.0 bits (68), Expect = 1.2
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 11/75 (14%)
Query: 27 KSQLLDHLNSHTGLKPYICHI--CKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDI-- 82
S + ++ +IC C +Y + LK H + H TG E + C
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH---TG----EKPFSCSWKG 54
Query: 83 CSKMFIEHHAMVKHR 97
C + F + +HR
Sbjct: 55 CERRFARSDELSRHR 69
Score = 28.9 bits (65), Expect = 2.9
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Query: 875 CHYCGITKNNKTL--LRDHISAHLGIKPYCCIF--CEEKYFSKKSLKRHEAKH 923
C + G K L+ H H G KP+ C + CE ++ L RH H
Sbjct: 20 CSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 28.5 bits (64), Expect = 3.3
Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 6/56 (10%)
Query: 1011 IHKC--PTCYKIFTENHALKKHLDWVHGNKCHICKV--CGAKIK--GNLQQHMETH 1060
H C P C K + ++ LK H G K C C + L +H TH
Sbjct: 17 SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 28.5 bits (64), Expect = 4.3
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Query: 1794 PHTCPV--CKKIFVNKVTLAAHKKIHLPIDKNCQCDV--CGKSFARTFHLKSH 1842
H C C K + L AH + H +K C C + FAR+ L H
Sbjct: 17 SHICSHPGCGKTYFKSSHLKAHTRTHTG-EKPFSCSWKGCERRFARSDELSRH 68
Score = 28.1 bits (63), Expect = 5.2
Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 12/73 (16%)
Query: 591 TLQDHMNTHTGNK-YKCDV--CDNGYSSLKHLKRHKMKHLQENGELPPSKIQKC--PICH 645
+ + + C C Y HLK H H GE P C C
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH---TGEKP----FSCSWKGCE 56
Query: 646 KIFIRNYMLRKHL 658
+ F R+ L +H
Sbjct: 57 RRFARSDELSRHR 69
Score = 27.7 bits (62), Expect = 6.5
Identities = 20/95 (21%), Positives = 27/95 (28%), Gaps = 32/95 (33%)
Query: 1026 ALKKHLDWVHGNKCHICKV--CGAKIK--GNLQQHMETHSGEKKICCHICGKKLRGRLNE 1081
+ HIC CG +L+ H T
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRT---------------------- 41
Query: 1082 HMLTHTGERPYACEF--CGSSFKDKSYLRIHIRKH 1114
HTGE+P++C + C F L H R H
Sbjct: 42 ----HTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 27.4 bits (61), Expect = 8.6
Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Query: 1168 STHLHSHGIKVHGLPPFICEH--CSKPFTSKGNLTVHVKYYHAKTLFECNI--CLKTFNF 1223
S+ I + IC H C K + +L H + + + F C+ C + F
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 1224 KTSYKRHLKQH 1234
RH + H
Sbjct: 62 SDELSRHRRTH 72
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 1e-09
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TG + F C CG + K L++H + HTGE+P +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 3e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TG + + C CG +F KS L +H + H GE+P S
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 4e-09
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TG + + C CG F K L +H + H GE+P S
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 2e-07
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG K + C C K FT+KSTL++H+K+H
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35
Score = 47.1 bits (113), Expect = 4e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + F C CGK F +K L H+++HTG KP
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 8e-07
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCE 476
+ TG + C CGK K L H HTGE+P G
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 6e-06
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TG + + C CGK + L H HTGE+P
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 2e-05
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G G + + C+ECG++F +S S+H K H G K
Sbjct: 1 GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEK 39
Score = 41.0 bits (97), Expect = 8e-05
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACE 1095
+ +G K C CGK + L+ H HTGE+P
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 9e-05
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TG + + C CG +F + ++H K HT
Sbjct: 1 GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHT 36
Score = 39.4 bits (93), Expect = 2e-04
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
G + F C+ECG++F +S S+H K H G
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG 37
Score = 36.7 bits (86), Expect = 0.002
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G K + C CG KS L H +IHTGE+P
Sbjct: 9 GGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.19
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C ++ KS L H HTG KP
Sbjct: 14 ECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.21
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ + +C CGK F + L H+ ++H G K
Sbjct: 6 SGTGGKHFECTECGKAFTRKSTLSMHQ-KIHTGEK 39
Score = 31.3 bits (72), Expect = 0.21
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC CG F K TL H HTG K
Sbjct: 14 ECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.94
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K FEC CG F ++ ++ H HTG K S
Sbjct: 4 GSSGTGGKH-----FECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 28.3 bits (64), Expect = 2.1
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K FEC C K + + L H HTGEK
Sbjct: 11 KHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 9.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
F C C K FT K L++H
Sbjct: 12 HFECTECGKAFTRKSTLSMH 31
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.5 bits (132), Expect = 1e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ GE+ Y C+ CG F S+L+ H R H GE+P S
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 54.1 bits (131), Expect = 1e-09
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ GE+ + C+VCG + +L H R HTGE+P +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 8e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ GE+ Y C++CG F +L H R H GE+P S
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 4e-08
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C+VCGK F Q +L+ H+RVHTG KP
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 9e-08
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFIC 1327
G K Y CD+C K+F+Q S L H+++H K
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 437 HMRIHTGERPVCCHICGKKL--RGKLKDHMLTHTGERPFGC 475
GE+ C +CGK+ L+ H HTGE+P G
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 4e-06
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
GE+ Y C +CGK L+ H HTGE+P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 6e-05
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+ Y C CG+ F+ S H + H G K
Sbjct: 1 GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 40.6 bits (96), Expect = 1e-04
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
GE+ Y C+ CG F+ H + HT
Sbjct: 1 GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHT 36
Score = 39.4 bits (93), Expect = 2e-04
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYAC 1094
+ GEK C +CGK+ L H HTGE+P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+KCY C +CG S+L+ H R+HTGE+P
Sbjct: 9 GEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 1109 IHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+ + C CG+ F+ S H + H G
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG 37
Score = 32.1 bits (74), Expect = 0.084
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 287 REVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ ++C CGK F HL H +RVH G K
Sbjct: 4 GSSGMGEKCYKCDVCGKEFSQSSHLQTH-QRVHTGEK 39
Score = 31.7 bits (73), Expect = 0.12
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ G K YKCDVC +S HL+ H+ H
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35
Score = 30.6 bits (70), Expect = 0.35
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ + +K +CDVCGK F+++ HL++H
Sbjct: 1 GSSGSSGMG-EKCYKCDVCGKEFSQSSHLQTH 31
Score = 30.2 bits (69), Expect = 0.43
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C +S S L H HTG KP
Sbjct: 14 KCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.60
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C++CG F+ LQ H HTG K
Sbjct: 14 KCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.65
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
+G K ++C CG +F +H+ H HTG K S
Sbjct: 4 GSSGMGEKC-----YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 4.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 1681 QCDTCGKSFTGNNHLKRH 1698
+CD CGK F+ ++HL+ H
Sbjct: 14 KCDVCGKEFSQSSHLQTH 31
Score = 26.7 bits (60), Expect = 7.5
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 176 VHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
MG +K ++C C K + L+ H HTGEK
Sbjct: 6 SGMG---EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 54.5 bits (132), Expect = 1e-09
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ GER + C CG F S H R H GE+P S
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 5e-09
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ GER C CG + H R HTGE+P +
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 5e-09
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ GER + C CG F H R H GE+P S
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 5e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ R C CGK F+Q +H+R+HTG KP
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 2e-07
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
G + + C C K F Q S HR++H
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 44.5 bits (106), Expect = 4e-06
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 437 HMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGC 475
GER C CGK H HTGE+P G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 44.1 bits (105), Expect = 6e-06
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
GER + C CGK +H HTGE+P
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 9e-06
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +GER + CS+CG+ F S F H + H G K
Sbjct: 1 GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 41.0 bits (97), Expect = 7e-05
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYAC 1094
+ GE+ C CGK +H HTGE+P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GER CS+CG+ F S F H + H G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 39.4 bits (93), Expect = 2e-04
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
GER + C+ CG F F H + HT
Sbjct: 1 GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHT 36
Score = 38.3 bits (90), Expect = 6e-04
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 410 QHRDWVHGDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
HG++ + C CG SN H RIHTGE+P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.006
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 287 REVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
R H+C CGK+F + +QH RR+H G K
Sbjct: 4 GSSGHGERGHRCSDCGKFFLQASNFIQH-RRIHTGEK 39
Score = 29.0 bits (66), Expect = 1.3
Identities = 9/30 (30%), Positives = 11/30 (36%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C C + S + H HTG KP
Sbjct: 14 RCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 2.9
Identities = 5/33 (15%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ G + ++C C + + +H+ H
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 27.9 bits (63), Expect = 3.4
Identities = 11/46 (23%), Positives = 15/46 (32%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G + C CG F+ ++ H HTG K S
Sbjct: 4 GSSGHGERG-----HRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 4.5
Identities = 9/30 (30%), Positives = 10/30 (33%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
C+ CG F H HTG K
Sbjct: 14 RCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 7.7
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+S G + + C C ++ A +H + H
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 26.7 bits (60), Expect = 8.2
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLH 1673
H C C K F+ N H+++H
Sbjct: 12 GHRCSDCGKFFLQASNFIQHRRIH 35
Score = 26.7 bits (60), Expect = 8.3
Identities = 6/32 (18%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ ++ +C CGK F + + H
Sbjct: 1 GSSGSSGHG-ERGHRCSDCGKFFLQASNFIQH 31
Score = 26.7 bits (60), Expect = 8.6
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 1036 GNKCHICKVCGA--KIKGNLQQHMETHSGEK 1064
G + H C CG N QH H+GEK
Sbjct: 9 GERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 42
Score = 54.1 bits (131), Expect = 1e-09
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFT 1121
+ GE+PY C+ CG +F K L +HIR H G P +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 51.8 bits (125), Expect = 1e-08
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPY 501
+ GE+P+ C+ CG + K L VH+R HTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 50.6 bits (122), Expect = 2e-08
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPY 747
+ GE+PY C+ CG F K L VH+R H G P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 50.3 bits (121), Expect = 3e-08
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
G KPY CD C K F+QK +L +H ++H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 46.0 bits (110), Expect = 9e-07
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 436 AHMRIHTGERPVCCHICGKKL--RGKLKDHMLTHTGERPF 473
GE+P C CGK +G L H+ HTG P
Sbjct: 1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 46.0 bits (110), Expect = 1e-06
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 1259 HMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYA 1298
+ + C+ CGK F QK L H RVHTG P +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 44.1 bits (105), Expect = 5e-06
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYA 720
GE+ Y C CGK +G L H+ HTG P +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 43.3 bits (103), Expect = 8e-06
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 737 HMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
GE+PY C +CG++F+ + + +H++ H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 41.0 bits (97), Expect = 5e-05
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
GE+PY C+ CG +F+ + + +H++ HT
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHT 35
Score = 40.6 bits (96), Expect = 8e-05
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 1056 HMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYA 1093
+ GEK C CGK +G L H+ HTG P +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 40.2 bits (95), Expect = 1e-04
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C +CG++F+ + + +H++ H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 36.4 bits (85), Expect = 0.003
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERP 446
G+K Y C CG K +L H+R+HTG P
Sbjct: 8 GEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39
Score = 32.2 bits (74), Expect = 0.097
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+P++C CGK F + L+ H RVH G
Sbjct: 5 SSGGEKPYRCDQCGKAFSQKGSLIVH-IRVHTGSG 38
Score = 30.6 bits (70), Expect = 0.30
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPY 43
C C +S K L+ H+ HTG P
Sbjct: 13 RCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 29.8 bits (68), Expect = 0.65
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK 603
C+ CG F+ K +L H+ HTG+
Sbjct: 13 RCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 29.1 bits (66), Expect = 0.95
Identities = 10/33 (30%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
+ G K Y+CD C +S L H H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 28.3 bits (64), Expect = 2.3
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 5/41 (12%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIK 356
G K + C CG F + + H+ HTG
Sbjct: 3 SGSSGGEKP-----YRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 27.5 bits (62), Expect = 3.4
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEK 212
K + C C K + + L HI HTG
Sbjct: 10 KPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 26.8 bits (60), Expect = 6.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
P+ C+ C K F+ KG+L VH
Sbjct: 11 PYRCDQCGKAFSQKGSLIVH 30
Score = 26.8 bits (60), Expect = 7.3
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 663 GNKYHSCKVCGAEI--KGSLKEHMIVHTGERKY 693
G K + C CG KGSL H+ VHTG
Sbjct: 8 GEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 54.1 bits (131), Expect = 1e-09
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+PF C CG +Y + +L H R HTGE+P +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 8e-09
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+P+ C CG S+ + +L H R H GE+P S
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 2e-08
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+P+ C CG ++ + +L H R H GE+P S
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 6e-07
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + F C CGK + Q+ +L +H+RVHTG KP
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 1e-06
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KP+ C C K + Q+ L H+++H
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE+ + C CGK R L +H HTGE+P
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+P+ C ECG+S+ R + H + H G K
Sbjct: 1 GSSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK 39
Score = 39.0 bits (92), Expect = 3e-04
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYAC 1094
+ +GEK C CGK R L +H HTGE+P
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 5e-04
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+P+ C CG S+ R H + HT
Sbjct: 1 GSSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHT 36
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+PF C ECG+S+ R + H + H G
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG 37
Score = 35.6 bits (83), Expect = 0.006
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K + C CG + +L H R+HTGE+P
Sbjct: 9 GEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.052
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P +C CGK + + HL QH+ RVH G K
Sbjct: 6 SGTGEKPFKCGECGKSYNQRVHLTQHQ-RVHTGEK 39
Score = 30.6 bits (70), Expect = 0.31
Identities = 14/46 (30%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K F+C CG + R H+ H HTG K S
Sbjct: 4 GSSGTGEKP-----FKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.36
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C Y+ + L H HTG KP
Sbjct: 14 KCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.2
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C CG + + L H HTG K
Sbjct: 14 KCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 4.8
Identities = 15/33 (45%), Positives = 17/33 (51%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K F+C C K+Y RV L H HTGEK
Sbjct: 11 KPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 5.7
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K +KC C Y+ HL +H+ H
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35
Score = 26.7 bits (60), Expect = 9.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
+C CGKS+ HL +H
Sbjct: 13 FKCGECGKSYNQRVHLTQH 31
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.0 bits (131), Expect = 2e-09
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSE 1124
+ +GE+PY C CG F S+L H R H GE+P S
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45
Score = 53.3 bits (129), Expect = 3e-09
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ +GE+P+ C CG + +L H R HTGE+P +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 5e-09
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSE 751
+ +GE+PY C CG F +L H R H GE+P S
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45
Score = 47.5 bits (114), Expect = 3e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + + C CGK F Q +L H R+HTG KP
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 5e-07
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G KPY C+ C K FTQ S L H ++H
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35
Score = 42.1 bits (100), Expect = 3e-05
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGKKMRGK--LKEHMLTHTGERPYAC 721
+GE+ Y C+ CGK L H HTGE+P
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +GE+PY C+ECG+ F S + H + H G K
Sbjct: 1 GSSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 38.6 bits (91), Expect = 5e-04
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYAC 1094
+ SGEK C+ CGK L H HTGE+P
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 5e-04
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GE+PY CN CG F H + HT
Sbjct: 1 GSSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHT 36
Score = 37.5 bits (88), Expect = 0.001
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GE+P+ C+ECG+ F S + H + H G
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG 37
Score = 34.8 bits (81), Expect = 0.010
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG S+L H RIHTGE+P
Sbjct: 9 GEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.075
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S +P++C CGK F HL H R+H G K
Sbjct: 6 SGSGEKPYKCNECGKVFTQNSHLTNH-WRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.24
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C+ C ++ S L +H HTG KP
Sbjct: 14 KCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.65
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F +H+ +H HTG K S
Sbjct: 4 GSSGSGEKP-----YKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 1.6
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+CN CG +F L +H HTG K
Sbjct: 14 KCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 1.7
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C+ CGK F + HL +H
Sbjct: 1 GSSGSSGSG-EKPYKCNECGKVFTQNSHLTNH 31
Score = 28.2 bits (64), Expect = 2.6
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ +G K YKC+ C ++ HL H H
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35
Score = 27.1 bits (61), Expect = 6.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 1681 QCDTCGKSFTGNNHLKRH 1698
+C+ CGK FT N+HL H
Sbjct: 14 KCNECGKVFTQNSHLTNH 31
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.1 bits (131), Expect = 2e-09
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ +GE+P+ CE CG F S L H R H GE+P S
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 2e-09
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 462 DHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ +GE+PF CE CG + L H R HTGE+P +
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 1e-08
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ +GE+P+ CE CG F L H R H GE+P S
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 49.1 bits (118), Expect = 8e-08
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + F CE CGK F Q L H+RVHTG KP
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 2e-07
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G KP+ C+ C K+FTQ S L+ H+++H
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35
Score = 45.2 bits (108), Expect = 2e-06
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 437 HMRIHTGERPVCCHICGKKL--RGKLKDHMLTHTGERPFGC 475
+GE+P C CGK+ +L H HTGE+P G
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 43.7 bits (104), Expect = 7e-06
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
+GE+ + C CGK +L H HTGE+P
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 5e-05
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +GE+P+ C ECG+ F S H + H G K
Sbjct: 1 GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK 39
Score = 39.8 bits (94), Expect = 2e-04
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYAC 1094
+ SGEK C CGK+ +L+ H HTGE+P
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 3e-04
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GE+P+ C CG F + H + HT
Sbjct: 1 GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHT 36
Score = 38.7 bits (91), Expect = 5e-04
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GE+PF C ECG+ F S H + H G
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG 37
Score = 34.8 bits (81), Expect = 0.011
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K + C+ CG S L +H R+HTGE+P
Sbjct: 9 GEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.12
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S +P +C+ CGK F L H +RVH G K
Sbjct: 6 SGSGEKPFKCEECGKRFTQNSQLHSH-QRVHTGEK 39
Score = 31.3 bits (72), Expect = 0.21
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C R++ SQL H HTG KP
Sbjct: 14 KCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.72
Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C CG F L H HTG K
Sbjct: 14 KCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.1
Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K F+C CG +F + + H HTG K S
Sbjct: 4 GSSGSGEKP-----FKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 1.4
Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 594 DHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ +G K +KC+ C ++ L H+ H
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35
Score = 27.1 bits (61), Expect = 5.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
+C+ CGK FT N+ L H
Sbjct: 13 FKCEECGKRFTQNSQLHSH 31
Score = 26.7 bits (60), Expect = 7.2
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C+ CGK F + L SH
Sbjct: 1 GSSGSSGSG-EKPFKCEECGKRFTQNSQLHSH 31
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Length = 46
Score = 54.1 bits (131), Expect = 2e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+ + C CG + L+ H + HTGE+P +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 7e-09
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+ Y C CG F S L H + H GE+P S
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 2e-08
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+ Y C CG F L H + H GE+P S
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 4e-07
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F + L +H+++HTG KP
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 9e-07
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG K Y C+ C K F++ S L+ H+K+H
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35
Score = 42.9 bits (102), Expect = 1e-05
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE++Y C+ CGK +L +H HTGE+P
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 1e-04
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +GEK+ C+ CGK L++H HTGE+P
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 2e-04
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 737 HMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
GE+ Y C+ECG+ F+ S S H K H G K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 39.0 bits (92), Expect = 3e-04
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+ Y CN CG F+ + H K HT
Sbjct: 1 GSSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHT 36
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+ + C+ECG+ F+ S S H K H G
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG 37
Score = 35.2 bits (82), Expect = 0.008
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCH 450
G+K Y C CG S L H +IHTGE+P
Sbjct: 9 GEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.11
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ + ++C CGK F L QH +++H G K
Sbjct: 6 SGTGEKRYKCNECGKVFSRNSQLSQH-QKIHTGEK 39
Score = 31.0 bits (71), Expect = 0.28
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICH 46
+C+ C +S SQL H HTG KP
Sbjct: 14 KCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.83
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+CN CG +F+ L H HTG K
Sbjct: 14 KCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.2
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K+ ++C CG F + ++ H HTG K S
Sbjct: 2 SS-GSSGTGEKR-----YKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 3.4
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC+ C +S L +H+ H
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35
Score = 27.9 bits (63), Expect = 3.7
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C+ CGK F+R L H
Sbjct: 1 GSSGSSGTG-EKRYKCNECGKVFSRNSQLSQH 31
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.1 bits (131), Expect = 2e-09
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+P+ C CG +F D L H R H GE+P S
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 2e-08
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+PF C CG + L H R HTGE+P +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 2e-08
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+P+ C CG F L H R H GE+P S
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 3e-07
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KP+ C C K F+ LN HR++H
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35
Score = 47.5 bits (114), Expect = 4e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + F C CGK F L +H+R+HTG KP
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 7e-07
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCE 476
+ TGE+P C CGK L H HTGE+P G
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 4e-06
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ + C CGK L +H HTGE+P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 8e-06
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +GEK C CGK LN+H HTGE+P
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 4e-05
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 737 HMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
GE+P+ C +CG++F+ + H + H G K
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 40.6 bits (96), Expect = 8e-05
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+P+ C CG +F+ N H + HT
Sbjct: 1 GSSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHT 36
Score = 39.4 bits (93), Expect = 2e-04
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+PF C +CG++F+ + H + H G
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG 37
Score = 36.0 bits (84), Expect = 0.004
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K + C CG L H RIHTGE+P
Sbjct: 9 GEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.073
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P C CGK F L QH RR+H G K
Sbjct: 6 SGTGEKPFDCIDCGKAFSDHIGLNQH-RRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.24
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C +S L H HTG KP
Sbjct: 14 DCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.39
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C CG F+ L H HTG K
Sbjct: 14 DCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.46
Identities = 13/49 (26%), Positives = 15/49 (30%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K F+C CG F + H HTG K S
Sbjct: 2 SS-GSSGTGEKP-----FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 28.3 bits (64), Expect = 2.7
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K + C C +S L +H+ H
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35
Score = 27.1 bits (61), Expect = 6.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K F+C C K + +GL H HTGEK
Sbjct: 11 KPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 2e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG + K L H R HTGE+P +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 4e-09
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG +F K+ L H R H GE+P S
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 51.7 bits (125), Expect = 1e-08
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG F K L H R H GE+P S
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 3e-07
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C C K F QK+ L H+++H
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35
Score = 47.1 bits (113), Expect = 4e-07
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F QK L +H+R+HTG KP
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 43.6 bits (104), Expect = 9e-06
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE+ Y C CGK + L +H HTGE+P
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 5e-05
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C ECG++FA ++ + H + H G K
Sbjct: 1 GSSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEK 39
Score = 41.0 bits (97), Expect = 7e-05
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYAC 1094
+ +GEK C CGK + L +H HTGE+P
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C CG +FA + H + HT
Sbjct: 1 GSSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHT 36
Score = 38.3 bits (90), Expect = 6e-04
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C ECG++FA ++ + H + H G
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG 37
Score = 37.1 bits (87), Expect = 0.002
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG K+NL H RIHTGE+P
Sbjct: 9 GEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.14
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F + +L QH+ R+H G K
Sbjct: 6 SGTGEKPYRCGECGKAFAQKANLTQHQ-RIHTGEK 39
Score = 30.6 bits (70), Expect = 0.33
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C C ++ K+ L H HTG KP
Sbjct: 14 RCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.73
Identities = 12/49 (24%), Positives = 16/49 (32%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K + C CG F + ++ H HTG K S
Sbjct: 2 SS-GSSGTGEKP-----YRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.85
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
C CG FA K L H HTG K
Sbjct: 14 RCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 5.9
Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K Y+C C ++ +L +H+ H
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35
Score = 26.7 bits (60), Expect = 7.2
Identities = 12/46 (26%), Positives = 16/46 (34%), Gaps = 4/46 (8%)
Query: 171 QHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
G +K + C C K + + L H HTGEK
Sbjct: 2 SSGSS-GTG---EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2ysv_A
Length = 46
Score = 53.7 bits (130), Expect = 2e-09
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C+ CG + +L H R HTGE+P +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 8e-09
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C+ CG +F ++L H R H GE+P S
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 2e-08
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C+ CG F +L H R H GE+P S
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 1e-06
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C+ CGK F Q +L +H+RVHTG KP
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 1e-06
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C C K F+Q + L H+++H
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35
Score = 42.9 bits (102), Expect = 2e-05
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE+ Y C CGK L +H HTGE+P
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 8e-05
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C ECG++F+ + H + H G K
Sbjct: 1 GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK 39
Score = 40.2 bits (95), Expect = 1e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYAC 1094
+ +GEK C CGK L +H HTGE+P
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C CG +F+ H + HT
Sbjct: 1 GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHT 36
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C ECG++F+ + H + H G
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG 37
Score = 34.8 bits (81), Expect = 0.010
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y CK CG ++L H R+HTGE+P
Sbjct: 9 GEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.067
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++CK CGK F HL+QH+ RVH G K
Sbjct: 6 SGTGEKPYECKECGKAFSQTTHLIQHQ-RVHTGEK 39
Score = 31.7 bits (73), Expect = 0.14
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C +S + L+ H HTG KP
Sbjct: 14 ECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.18
Identities = 15/49 (30%), Positives = 17/49 (34%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K +EC CG F TH+ H HTG K S
Sbjct: 2 SS-GSSGTGEKP-----YECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 28.2 bits (64), Expect = 2.5
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C CGK+F++T HL H
Sbjct: 1 GSSGSSGTG-EKPYECKECGKAFSQTTHLIQH 31
Score = 28.2 bits (64), Expect = 2.7
Identities = 11/30 (36%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC CG F+ L H HTG K
Sbjct: 14 ECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 4.7
Identities = 13/46 (28%), Positives = 16/46 (34%), Gaps = 4/46 (8%)
Query: 171 QHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
G +K +EC C K + L H HTGEK
Sbjct: 2 SSGSS-GTG---EKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 6.6
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K Y+C C +S HL +H+ H
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 2e-09
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C+VC + + L H R H+GE+P +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 52.9 bits (128), Expect = 4e-09
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C+ C +F + L H R H+GE+P S
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 51.4 bits (124), Expect = 2e-08
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C++C F L H R H+GE+P S
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 46.7 bits (112), Expect = 6e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C+VC K F L +H+RVH+G KP
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 46.7 bits (112), Expect = 6e-07
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY CD+C K F+ ++L H+++H
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35
Score = 44.0 bits (105), Expect = 6e-06
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C +C K L +H H+GE+P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 42.9 bits (102), Expect = 2e-05
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C C ++F+ ++ + H + H+G K
Sbjct: 1 GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK 39
Score = 41.3 bits (98), Expect = 5e-05
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C+ C +F+ + H + H+
Sbjct: 1 GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHS 36
Score = 41.3 bits (98), Expect = 5e-05
Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACE 1095
+ +GEK C +C K L +H H+GE+P
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 37.9 bits (89), Expect = 8e-04
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 1109 IHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C C ++F+ ++ + H + H+G
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG 37
Score = 35.9 bits (84), Expect = 0.004
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C +C ++L H R+H+GE+P
Sbjct: 9 GEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.27
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C C K F L QH+ RVH G K
Sbjct: 6 SGTGEKPYECDVCRKAFSHHASLTQHQ-RVHSGEK 39
Score = 30.6 bits (70), Expect = 0.31
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C +S + L H H+G KP
Sbjct: 14 ECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.39
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC++C F+ +L H H+G K
Sbjct: 14 ECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.3
Identities = 11/49 (22%), Positives = 14/49 (28%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K +EC C F + H H+G K S
Sbjct: 2 SS-GSSGTGEKP-----YECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 27.5 bits (62), Expect = 4.1
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K Y+CDVC +S L +H+ H
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35
Score = 27.1 bits (61), Expect = 6.2
Identities = 12/47 (25%), Positives = 16/47 (34%), Gaps = 4/47 (8%)
Query: 171 QHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
G +K +EC C K + L H H+GEK
Sbjct: 2 SSGSS-GTG---EKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 44
Score = 53.7 bits (130), Expect = 2e-09
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTC 1122
+ +GE+PY C CG +F KS L +H R H G +
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 52.9 bits (128), Expect = 4e-09
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVC 503
+ +GE+P+ C CG + +K L VH R H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 51.0 bits (123), Expect = 2e-08
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMC 749
+ +GE+PY C CG F K L VH R H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 47.1 bits (113), Expect = 5e-07
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G KPY C+ C K F KS L +H + H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35
Score = 46.8 bits (112), Expect = 7e-07
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + + C CGK FI K L H+R H G +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 43.3 bits (103), Expect = 1e-05
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +GE+PY C+ECG++F +S +H + HAG
Sbjct: 1 GSSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39
Score = 42.5 bits (101), Expect = 2e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
+GE+ Y C+ CGK + L H TH G +
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 40.6 bits (96), Expect = 8e-05
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GE+PY CN CG +F + +H + H
Sbjct: 1 GSSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHA 36
Score = 39.8 bits (94), Expect = 2e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ SGEK C+ CGK + L H TH G +
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 39.1 bits (92), Expect = 3e-04
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GE+P+ C+ECG++F +S +H + HAG
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 36.4 bits (85), Expect = 0.002
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 5/39 (12%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCHICG 453
G+K Y C CG KS L H R H G G
Sbjct: 9 GEKPYECNECGKAFIWKSLLIVHERTHAGVSG---PSSG 44
Score = 31.0 bits (71), Expect = 0.24
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S +P++C CGK F + L+ HE R H GV
Sbjct: 6 SGSGEKPYECNECGKAFIWKSLLIVHE-RTHAGVS 39
Score = 31.0 bits (71), Expect = 0.25
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
ECN CG F K L H TH G
Sbjct: 14 ECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 30.6 bits (70), Expect = 0.38
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC+ C + KS L+ H +H G+
Sbjct: 14 ECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 29.8 bits (68), Expect = 0.61
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
Query: 317 RVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVC 360
G K +EC CG FI ++ + H +H G+
Sbjct: 5 SSGSGEKP-----YECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 29.4 bits (67), Expect = 0.87
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K +EC C K ++ + L H H G G
Sbjct: 11 KPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 27.5 bits (62), Expect = 4.8
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPS 636
++ +G K Y+C+ C + L H+ H G PS
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTH---AGVSGPS 42
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 2e-09
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C+VCG ++ +L H H+GERP +
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 52.1 bits (126), Expect = 8e-09
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 1081 EHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C+ CG +F+ S+L H H+GERP S
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 51.0 bits (123), Expect = 2e-08
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 708 EHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C++CG F+ +L H H+GERP S
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 46.7 bits (112), Expect = 6e-07
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 1259 HMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + C+VCGK F +L +H VH+G +P
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 1286 EHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C +C K F S L H +H
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 682 EHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE+ Y C +CGK ++ L +H H+GERP
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 40.6 bits (96), Expect = 8e-05
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYAC 1094
+ +GEK C +CGK R L +H H+GERP
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 38.3 bits (90), Expect = 5e-04
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 737 HMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
GE+PY C CG++F S H H+G +
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGER 39
Score = 37.9 bits (89), Expect = 8e-04
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C++CG RV S+L H +H+GERP
Sbjct: 9 GEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C CG +F H H+
Sbjct: 1 GSSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHS 36
Score = 36.0 bits (84), Expect = 0.004
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C CG++F S H H+G
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG 37
Score = 33.6 bits (78), Expect = 0.032
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C+ CGK F+ HLVQH VH G +
Sbjct: 6 SGTGEKPYKCQVCGKAFRVSSHLVQH-HSVHSGER 39
Score = 30.2 bits (69), Expect = 0.41
Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F +H+ H + H+G + S
Sbjct: 2 SS-GSSGTGEKP-----YKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 29.8 bits (68), Expect = 0.56
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C + S L+ H + H+G +P
Sbjct: 14 KCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 29.0 bits (66), Expect = 1.2
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC VC + HL +H H
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35
Score = 28.6 bits (65), Expect = 1.7
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C VCGK+F + HL H
Sbjct: 1 GSSGSSGTG-EKPYKCQVCGKAFRVSSHLVQH 31
Score = 26.7 bits (60), Expect = 8.1
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C +CG F L H + H+G +
Sbjct: 14 KCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.6 bits (130), Expect = 2e-09
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG ++ +LA H HTGE+P +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 51.3 bits (124), Expect = 2e-08
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG F+ S+L H H GE+P S
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG F+ +L H H GE+P S
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 45.9 bits (110), Expect = 1e-06
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F + +L H+ +HTG KP
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 45.5 bits (109), Expect = 2e-06
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C C K F + S L H+ +H
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35
Score = 43.6 bits (104), Expect = 9e-06
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y CH CGK + L H L HTGE+P
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 1e-04
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C ECG+ F S + H H G K
Sbjct: 1 GSSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK 39
Score = 39.8 bits (94), Expect = 2e-04
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +GEK CH CGK R L H L HTGE+P
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 38.6 bits (91), Expect = 4e-04
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C+ CG F H HT
Sbjct: 1 GSSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHT 36
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C ECG+ F S + H H G
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG 37
Score = 35.5 bits (83), Expect = 0.005
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCH 450
G+K Y C CG R S+L H IHTGE+P
Sbjct: 9 GEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.090
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F+ HL +H + +H G K
Sbjct: 6 SGTGEKPYKCHECGKVFRRNSHLARH-QLIHTGEK 39
Score = 30.5 bits (70), Expect = 0.37
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICH 46
+CH C + S L H HTG KP
Sbjct: 14 KCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.75
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F +H+A H HTG K S
Sbjct: 4 GSSGTGEKP-----YKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 1.5
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC C + HL RH++ H
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35
Score = 28.2 bits (64), Expect = 2.3
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C+ CG +F L H HTG K
Sbjct: 14 KCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 27.4 bits (62), Expect = 4.1
Identities = 10/32 (31%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C CGK F R HL H
Sbjct: 1 GSSGSSGTG-EKPYKCHECGKVFRRNSHLARH 31
Score = 27.1 bits (61), Expect = 6.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
++C CGK F N+HL RH
Sbjct: 13 YKCHECGKVFRRNSHLARH 31
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 2e-09
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 1081 EHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ +GE+P+ CE CG F S+L H R H GE+P S
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 3e-09
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 462 DHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ +GE+PF CE CG + +L H R HTGE+P +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 2e-08
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 708 EHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ +GE+P+ CE CG F +L H R H GE+P S
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 1e-07
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 1286 EHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFIC 1327
+G KP+ C+ C K+FTQ S L+ H+++H K
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 2e-07
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + F CE CGK F Q +L H+RVHTG KP
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 3e-06
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 437 HMRIHTGERPVCCHICGKKL--RGKLKDHMLTHTGERPFGC 475
+GE+P C CGK+ L H HTGE+P G
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 682 EHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
+GE+ + C CGK L H HTGE+P
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +GE+P+ C ECG+ F S H + H G K
Sbjct: 1 GSSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39
Score = 40.2 bits (95), Expect = 1e-04
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYAC 1094
+ SGEK C CGK+ L+ H HTGE+P
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 4e-04
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GE+P+ C CG F + H + HT
Sbjct: 1 GSSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHT 36
Score = 37.9 bits (89), Expect = 8e-04
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GE+PF C ECG+ F S H + H G
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG 37
Score = 35.2 bits (82), Expect = 0.009
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCH 450
G+K + C+ CG S+L +H R+HTGE+P
Sbjct: 9 GEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 33.7 bits (78), Expect = 0.027
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S +P QC+ CGK F HL H +RVH G K
Sbjct: 6 SGSGEKPFQCEECGKRFTQNSHLHSH-QRVHTGEK 39
Score = 32.5 bits (75), Expect = 0.070
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICH 46
+C C R++ S L H HTG KP
Sbjct: 14 QCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 31.0 bits (71), Expect = 0.24
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K F+C CG +F +H+ H HTG K S
Sbjct: 4 GSSGSGEKP-----FQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 29.1 bits (66), Expect = 1.1
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K QC+ CGK F + HL SH
Sbjct: 1 GSSGSSGSG-EKPFQCEECGKRFTQNSHLHSH 31
Score = 28.7 bits (65), Expect = 1.4
Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 594 DHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ +G K ++C+ C ++ HL H+ H
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35
Score = 28.7 bits (65), Expect = 1.7
Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C CG F L H HTG K
Sbjct: 14 QCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
QC+ CGK FT N+HL H
Sbjct: 13 FQCEECGKRFTQNSHLHSH 31
Score = 27.5 bits (62), Expect = 4.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K F+C C K + L H HTGEK
Sbjct: 11 KPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 2e-09
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY CE CG +F S L+ H R H GE+P S
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 3e-09
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ CE CG + + L H R HTGE+P +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 2e-08
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY CE CG F L H R H GE+P S
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 3e-07
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + CE CGK FI L+EH+R+HTG KP
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 46.8 bits (112), Expect = 6e-07
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K F S L H+++H
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35
Score = 45.6 bits (109), Expect = 2e-06
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCE 476
+ TGE+P C CGK +L++H HTGE+P G
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 44.1 bits (105), Expect = 5e-06
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C CGK +L+EH HTGE+P
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 3e-05
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C ECG++F S H + H G K
Sbjct: 1 GSSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39
Score = 39.8 bits (94), Expect = 2e-04
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACE 1095
+ +GEK C CGK +L EH HTGE+P
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 3e-04
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C CG +F H + HT
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHT 36
Score = 37.9 bits (89), Expect = 8e-04
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C ECG++F S H + H G
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG 37
Score = 36.0 bits (84), Expect = 0.005
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C+ CG S L+ H RIHTGE+P
Sbjct: 9 GEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.15
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P+ C+ CGK F L +H +R+H G K
Sbjct: 6 SGTGEKPYNCEECGKAFIHDSQLQEH-QRIHTGEK 39
Score = 30.6 bits (70), Expect = 0.35
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C C + SQL +H HTG KP
Sbjct: 14 NCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.1
Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K + C CG FI + + +H HTG K S
Sbjct: 4 GSSGTGEKP-----YNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 1.3
Identities = 11/30 (36%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
C CG F LQ+H HTG K
Sbjct: 14 NCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 4.9
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K Y C+ C + L+ H+ H
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35
Score = 27.1 bits (61), Expect = 6.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K + C C K ++ L++H HTGEK
Sbjct: 11 KPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 2e-09
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG + + L H + HT ++P +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 52.9 bits (128), Expect = 4e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG +F +S L H + H ++P S
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 51.7 bits (125), Expect = 1e-08
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG F + L H + H ++P S
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 47.1 bits (113), Expect = 4e-07
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCE 476
+ TGE+P C CGK +R L H HT ++P G
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 47.1 bits (113), Expect = 4e-07
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C C K FT +S L H+K+H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35
Score = 46.7 bits (112), Expect = 6e-07
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F + L +H+++HT KP
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 44.8 bits (107), Expect = 3e-06
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C CGK +R L +H HT ++P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 43.7 bits (104), Expect = 7e-06
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY+C+ECG++F RS H K H K
Sbjct: 1 GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK 39
Score = 41.7 bits (99), Expect = 3e-05
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY+C CG +F R H K HT
Sbjct: 1 GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHT 36
Score = 41.0 bits (97), Expect = 8e-05
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYACE 1095
+ +GEK C CGK +R L +H HT ++P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 38.6 bits (91), Expect = 5e-04
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C+ECG++F RS H K H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK 37
Score = 37.5 bits (88), Expect = 0.001
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y+C CG ++SNL H +IHT ++P
Sbjct: 9 GEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 32.1 bits (74), Expect = 0.11
Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P+ C CGK F + +L++H+ ++H K
Sbjct: 6 SGTGEKPYICAECGKAFTIRSNLIKHQ-KIHTKQK 39
Score = 30.9 bits (71), Expect = 0.29
Identities = 12/46 (26%), Positives = 16/46 (34%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K + C CG F R+++ H HT K S
Sbjct: 4 GSSGTGEKP-----YICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 30.9 bits (71), Expect = 0.29
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C C ++ +S L+ H HT KP
Sbjct: 14 ICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 29.0 bits (66), Expect = 1.1
Identities = 9/30 (30%), Positives = 10/30 (33%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
C CG F + L H HT K
Sbjct: 14 ICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 27.5 bits (62), Expect = 4.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
P+IC C K FT + NL H
Sbjct: 12 PYICAECGKAFTIRSNLIKH 31
Score = 27.5 bits (62), Expect = 4.8
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K + CA C K + R L H HT +K
Sbjct: 11 KPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 26.7 bits (60), Expect = 9.0
Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K Y C C ++ +L +H+ H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 3e-09
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TG +P+ C CG + L H HTGE+P +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 4e-09
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TG +PY C CG +F S L H H GE+P S
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 2e-08
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TG +PY C CG F L H H GE+P S
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 7e-07
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K F+ S+L H+ +H
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35
Score = 46.4 bits (111), Expect = 8e-07
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F L H+ +HTG KP
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 1e-06
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCE 476
+ TG +P C+ CGK L H + HTGE+P G
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 9e-06
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TG + Y C+ CGK + L H + HTGE+P
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 4e-05
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 737 HMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +PYMC+ECG++F+ S+ + H H G K
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEK 39
Score = 40.2 bits (95), Expect = 1e-04
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TG +PY+CN CG +F+ + H HT
Sbjct: 1 GSSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHT 36
Score = 39.8 bits (94), Expect = 2e-04
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +G K C+ CGK L H + HTGE+P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 37.9 bits (89), Expect = 8e-04
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
G +P+ C+ECG++F+ S+ + H H G
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG 37
Score = 36.0 bits (84), Expect = 0.004
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G K Y+C CG V S+L H IHTGE+P
Sbjct: 9 GVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.18
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ V+P+ C CGK F L H + +H G K
Sbjct: 6 SGTGVKPYMCNECGKAFSVYSSLTTH-QVIHTGEK 39
Score = 30.6 bits (70), Expect = 0.37
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
CN CG F+ +L H HTG K
Sbjct: 14 MCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.64
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C+ C +S S L H HTG KP
Sbjct: 14 MCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 28.3 bits (64), Expect = 2.4
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K Y C+ C +S L H++ H
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35
Score = 27.1 bits (61), Expect = 5.4
Identities = 13/46 (28%), Positives = 16/46 (34%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
GVK + C CG F + + H HTG K S
Sbjct: 4 GSSGTGVKP-----YMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Length = 42
Score = 53.3 bits (129), Expect = 3e-09
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 1085 THTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTC 1122
+GE PY C CG +F K L H R H GE +
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 51.7 bits (125), Expect = 9e-09
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 466 THTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVC 503
+GE P+ C CG + K L H R H GE
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 51.4 bits (124), Expect = 1e-08
Identities = 15/38 (39%), Positives = 16/38 (42%)
Query: 712 THTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMC 749
+GE PY C CG F K L H R H GE
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 44.4 bits (106), Expect = 4e-06
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 1262 IHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + C CGK F +K L H+R H G +
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 42.9 bits (102), Expect = 1e-05
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 687 HTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
+GE Y C CGK + +L H TH GE +
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 41.3 bits (98), Expect = 4e-05
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 1288 KRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G PY C C K F +K L H++ H
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTH 33
Score = 41.0 bits (97), Expect = 6e-05
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 439 RIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGC 475
+GE P C CGK + +L H TH GE
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 39.4 bits (93), Expect = 2e-04
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 739 RKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
+GE PY CSECG++F + H + HAG
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGES 37
Score = 39.0 bits (92), Expect = 3e-04
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1059 THSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
SGE C CGK + +L H TH GE +
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 1112 RKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GE P+ CSECG++F + H + HAG
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAG 35
Score = 36.0 bits (84), Expect = 0.003
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 493 RKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GE PY C+ CG +F + H + H
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHA 34
Score = 35.2 bits (82), Expect = 0.007
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+ Y C CG K L +H R H GE
Sbjct: 7 GENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 34.0 bits (79), Expect = 0.017
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 287 REVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S P++C CGK F + L+ H+ R H G
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQ-RTHAGES 37
Score = 33.3 bits (77), Expect = 0.037
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C ++ K QL+ H +H G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 30.6 bits (70), Expect = 0.31
Identities = 11/30 (36%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC+ CG F K L H TH G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 29.4 bits (67), Expect = 0.87
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
+EC+ C K + + L H H GE G
Sbjct: 9 NPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 28.2 bits (64), Expect = 2.2
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIKNHVC 360
+EC CG F + + H +H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.4 bits (129), Expect = 3e-09
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG +F D S H R H G+RP S
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 52.6 bits (127), Expect = 5e-09
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG + H R HTG+RP +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 50.7 bits (122), Expect = 3e-08
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG F H R H G+RP S
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 46.0 bits (110), Expect = 1e-06
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F +H+R+HTG +P
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 46.0 bits (110), Expect = 1e-06
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C C K F S+ H++LH
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35
Score = 45.6 bits (109), Expect = 1e-06
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKL--RGKLKDHMLTHTGERPFGCE 476
+ TGE+P C CGK H HTG+RP G
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 44.1 bits (105), Expect = 5e-06
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C CGK +H HTG+RP
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 42.2 bits (100), Expect = 3e-05
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C ECG++F S+ + H + H G +
Sbjct: 1 GSSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39
Score = 39.9 bits (94), Expect = 2e-04
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +GEK C CGK +H HTG+RP
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 39.9 bits (94), Expect = 2e-04
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY C CG +F + H + HT
Sbjct: 1 GSSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHT 36
Score = 38.7 bits (91), Expect = 5e-04
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C ECG++F S+ + H + H G
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG 37
Score = 35.6 bits (83), Expect = 0.006
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG S+ H R+HTG+RP
Sbjct: 9 GEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 32.2 bits (74), Expect = 0.097
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F QH+ R+H G +
Sbjct: 6 SGTGEKPYKCMECGKAFGDNSSCTQHQ-RLHTGQR 39
Score = 30.2 bits (69), Expect = 0.40
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C + S H HTG +P
Sbjct: 14 KCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 29.5 bits (67), Expect = 0.98
Identities = 11/46 (23%), Positives = 15/46 (32%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F + H HTG + S
Sbjct: 4 GSSGTGEKP-----YKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 29.1 bits (66), Expect = 1.1
Identities = 8/30 (26%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C CG F + H HTG +
Sbjct: 14 KCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 26.8 bits (60), Expect = 8.5
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC C + +H+ H
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 3e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG + LA H R HTGE+P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 6e-09
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG +F S L H R H GE+P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 2e-08
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG F L H R H GE+P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 4e-07
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K F+Q S L H+++H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35
Score = 46.7 bits (112), Expect = 7e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F Q L H+R+HTG KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 2e-06
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 437 HMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCE 476
TGE+P C+ CGK L H HTGE+P G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C+ CGK KL H HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 41.0 bits (97), Expect = 8e-05
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C+ECG++F+ S + H + H G K
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK 39
Score = 39.0 bits (92), Expect = 4e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +GEK C+ CGK L H HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 6e-04
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY CN CG +F+ H + HT
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHT 36
Score = 36.3 bits (85), Expect = 0.003
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C+ECG++F+ S + H + H G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG 37
Score = 35.6 bits (83), Expect = 0.005
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG S L H RIHTGE+P
Sbjct: 9 GEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.15
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F L +H +R+H G K
Sbjct: 6 SGTGEKPYKCNECGKAFSQTSKLARH-QRIHTGEK 39
Score = 30.6 bits (70), Expect = 0.38
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C+ C +S S+L H HTG KP
Sbjct: 14 KCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.78
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+CN CG F+ L H HTG K
Sbjct: 14 KCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.93
Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F + +A H HTG K S
Sbjct: 4 GSSGTGEKP-----YKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 4.7
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC+ C +S L RH+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 3e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG ++ L H HTGE+P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 5e-09
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG +F+ S L H H GE+P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 2e-08
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG F+ L H H GE+P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 5e-07
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F L H+ +HTG KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 1e-06
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K F S L H+ +H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35
Score = 45.6 bits (109), Expect = 1e-06
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCE 476
+ TGE+P C+ CGK R L H + HTGE+P G
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 5e-06
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C+ CGK + L H + HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 4e-05
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +GEK C+ CGK R L H + HTGE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 4e-05
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C+ECG++F A S + H H G K
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK 39
Score = 39.8 bits (94), Expect = 2e-04
Identities = 14/36 (38%), Positives = 16/36 (44%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY CN CG +F A H HT
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHT 36
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C+ECG++F A S + H H G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG 37
Score = 36.7 bits (86), Expect = 0.002
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG R SNL H IHTGE+P
Sbjct: 9 GEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.10
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F++ +L H + +H G K
Sbjct: 6 SGTGEKPYKCNECGKAFRAHSNLTTH-QVIHTGEK 39
Score = 30.2 bits (69), Expect = 0.52
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C+ C + + S L H HTG KP
Sbjct: 14 KCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.75
Identities = 11/30 (36%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+CN CG F L H HTG K
Sbjct: 14 KCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 1.6
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F + +++ H HTG K S
Sbjct: 2 SS-GSSGTGEKP-----YKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 1.9
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC+ C + + +L H++ H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35
Score = 26.7 bits (60), Expect = 7.6
Identities = 8/32 (25%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C+ CGK+F +L +H
Sbjct: 1 GSSGSSGTG-EKPYKCNECGKAFRAHSNLTTH 31
Score = 26.7 bits (60), Expect = 7.6
Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Query: 171 QHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
G +K ++C C K + + L H HTGEK
Sbjct: 2 SSGSS-GTG---EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 3e-09
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ +GE+P+ C+ CG + L H R HTGE+P +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 8e-09
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ +GE+PY C++CG +F + L H R H GE+P S
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ +GE+PY C+ CG F L H R H GE+P S
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 6e-07
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G KPY CD C K F + L H+++H
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35
Score = 45.6 bits (109), Expect = 1e-06
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + + C+ CGK F L H+R+HTG KP
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 437 HMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGC 475
+GE+P C CGK L +L H HTGE+P G
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 1e-05
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
+GE+ Y C CGK + +L H HTGE+P
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 4e-05
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +GE+PY+C CG++F + H + H G K
Sbjct: 1 GSSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEK 39
Score = 41.3 bits (98), Expect = 5e-05
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYAC 1094
+ SGEK C CGK L H HTGE+P
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GE+PYVC+YCG +F H + HT
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHT 36
Score = 37.5 bits (88), Expect = 0.001
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GE+P+ C CG++F + H + H G
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG 37
Score = 37.1 bits (87), Expect = 0.002
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y+C CG + + L H RIHTGE+P
Sbjct: 9 GEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.085
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S +P+ C CGK F LV+H +R+H G K
Sbjct: 6 SGSGEKPYVCDYCGKAFGLSAELVRH-QRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.28
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
C +C + ++L+ H HTG KP
Sbjct: 14 VCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.57
Identities = 12/49 (24%), Positives = 15/49 (30%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K + C +CG F + H HTG K S
Sbjct: 2 SSGS-SGSGEKP-----YVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 1.5
Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
C+ CG F L H HTG K
Sbjct: 14 VCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 4.5
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ +G K Y CD C + L RH+ H
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 3e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG + +LA H R HTG +P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 52.1 bits (126), Expect = 9e-09
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG F S+L H R H G +P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 50.2 bits (121), Expect = 4e-08
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG F +L H R H G +P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 47.1 bits (113), Expect = 4e-07
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K FTQ S L H+++H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35
Score = 46.7 bits (112), Expect = 6e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F Q +L H+R+HTG KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 41.7 bits (99), Expect = 4e-05
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C+ CGK L H HTG +P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 40.6 bits (96), Expect = 8e-05
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C+ECG+ F S + H + H G K
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVK 39
Score = 37.9 bits (89), Expect = 9e-04
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY CN CG F H + HT
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHT 36
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYACE 1095
+ +GEK C+ CGK L H HTG +P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C+ECG+ F S + H + H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG 37
Score = 35.2 bits (82), Expect = 0.008
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCH 450
G+K Y C CG S+L H RIHTG +P
Sbjct: 9 GEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 32.5 bits (75), Expect = 0.081
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F HL H +R+H GVK
Sbjct: 6 SGTGEKPYKCNECGKVFTQNSHLANH-QRIHTGVK 39
Score = 31.0 bits (71), Expect = 0.22
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICH 46
+C+ C ++ S L +H HTG+KP
Sbjct: 14 KCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 29.8 bits (68), Expect = 0.70
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F +H+A+H HTG+K S
Sbjct: 4 GSSGTGEKP-----YKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 29.0 bits (66), Expect = 1.2
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+CN CG +F L +H HTG K
Sbjct: 14 KCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 27.9 bits (63), Expect = 3.5
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC+ C ++ HL H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35
Score = 27.1 bits (61), Expect = 6.2
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 1812 AHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C+ CGK F + HL +H
Sbjct: 2 SSGSSGTG-EKPYKCNECGKVFTQNSHLANH 31
Score = 26.7 bits (60), Expect = 7.9
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 1681 QCDTCGKSFTGNNHLKRH 1698
+C+ CGK FT N+HL H
Sbjct: 14 KCNECGKVFTQNSHLANH 31
Score = 26.7 bits (60), Expect = 8.6
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K ++C C K + L +H HTG K
Sbjct: 11 KPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 53.4 bits (129), Expect = 3e-09
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ +GE+ + C+ CG +F S LRIH R H GE+ S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 50.3 bits (121), Expect = 3e-08
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ +GE+ C+ CG + Y L +H R H GE+ +
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 49.1 bits (118), Expect = 8e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ +GE+ + C+ CG F L +H R H GE+ S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 46.4 bits (111), Expect = 8e-07
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G K + CD C K F S L IH+++H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35
Score = 44.5 bits (106), Expect = 4e-06
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 1259 HMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACD 1300
+ + TC+ CGK F L H+RVH G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 44.1 bits (105), Expect = 5e-06
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +GE+ + C ECG++F SA +H + H G K
Sbjct: 1 GSSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 43.7 bits (104), Expect = 8e-06
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 437 HMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCE 476
+GE+ C CGK L+ H H GE+ G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 40.3 bits (95), Expect = 1e-04
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GE+ + C+ CG +F A +H + H
Sbjct: 1 GSSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM 36
Score = 40.3 bits (95), Expect = 1e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGKKMRGK--LKEHMLTHTGERPYACE 722
+GE+ + C CGK L+ H H GE+
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 39.9 bits (94), Expect = 2e-04
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GE+ TC ECG++F SA +H + H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 35.6 bits (83), Expect = 0.005
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K + C CG S L+ H R+H GE+
Sbjct: 9 GEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 34.9 bits (81), Expect = 0.010
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 287 REVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S + H C CGK F L H+ RVH+G K
Sbjct: 4 GSSGSGEKSHTCDECGKNFCYISALRIHQ-RVHMGEK 39
Score = 27.9 bits (63), Expect = 3.0
Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQE 629
++ +G K + CD C + + L+ H+ H+ E
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGE 38
Score = 27.9 bits (63), Expect = 3.3
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK 603
C+ CG F L+ H H G K
Sbjct: 14 TCDECGKNFCYISALRIHQRVHMGEK 39
Score = 27.2 bits (61), Expect = 6.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
H CD CGK+F + L+ H
Sbjct: 13 HTCDECGKNFCYISALRIH 31
Score = 26.8 bits (60), Expect = 6.9
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 663 GNKYHSCKVCGAEI--KGSLKEHMIVHTGERKYCC 695
G K H+C CG +L+ H VH GE+
Sbjct: 9 GEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 3e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TG +P+ C CG + LA H R HTGE+P +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 2e-08
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TG +PY C CG +F S L H R H GE+P S
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TG +PY C CG F L H R H GE+P S
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 46.8 bits (112), Expect = 6e-07
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K F+Q S L H+++H
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35
Score = 45.6 bits (109), Expect = 2e-06
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F Q L H+RVHTG KP
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 1e-05
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TG + Y C+ CGK KL H HTGE+P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 41.4 bits (98), Expect = 4e-05
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G G +PY C+ECG++F+ S + H + H G K
Sbjct: 1 GSSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEK 39
Score = 38.7 bits (91), Expect = 4e-04
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +G K C+ CGK L H HTGE+P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 6e-04
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TG +PY CN CG +F+ H + HT
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHT 36
Score = 37.1 bits (87), Expect = 0.001
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 1109 IHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
G +P+ C+ECG++F+ S + H + H G
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG 37
Score = 35.2 bits (82), Expect = 0.007
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G K Y C CG S L H R+HTGE+P
Sbjct: 9 GGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.032
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P+QC CGK F L +H +RVH G K
Sbjct: 6 SGTGGKPYQCNECGKAFSQTSKLARH-QRVHTGEK 39
Score = 30.6 bits (70), Expect = 0.34
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C+ C +S S+L H HTG KP
Sbjct: 14 QCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.42
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+CN CG F+ L H HTG K
Sbjct: 14 QCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.85
Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F + +A H HTG K S
Sbjct: 4 GSSGTGGKP-----YQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 5.9
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K Y+C+ C +S L RH+ H
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 3e-09
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ +GE+PF C+ CG ++ +LA H+R HTGE+P +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 51.3 bits (124), Expect = 1e-08
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ +GE+P+ C+ CG +F+ +L H+R H GE+P S
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 5e-08
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ +GE+P+ C+ CG F+ +L H+R H GE+P S
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 7e-07
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + F C+ CGK F Q +L H R+HTG KP
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 1e-06
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G KP+ C C K F Q L H ++H
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35
Score = 45.6 bits (109), Expect = 2e-06
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCE 476
+ +GE+P C CGK + L H+ HTGE+P G
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 43.6 bits (104), Expect = 7e-06
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
+GE+ + C CGK + L H+ HTGE+P
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 40.9 bits (97), Expect = 8e-05
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ SGEK C CGK R L H+ HTGE+P
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 1e-04
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G +GE+P+ C ECG++F + HL+ H G K
Sbjct: 1 GSSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEK 39
Score = 38.6 bits (91), Expect = 4e-04
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GE+P+ C CG +F HL+ HT
Sbjct: 1 GSSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHT 36
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GE+PF C ECG++F + HL+ H G
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG 37
Score = 36.7 bits (86), Expect = 0.002
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCH 450
G+K + CK CG R +L +H+RIHTGE+P
Sbjct: 9 GEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.036
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S +P +CK CGK F+ HL H R+H G K
Sbjct: 6 SGSGEKPFKCKECGKAFRQNIHLASH-LRIHTGEK 39
Score = 32.5 bits (75), Expect = 0.080
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICH 46
+C C + L HL HTG KP
Sbjct: 14 KCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.17
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 5/45 (11%)
Query: 317 RVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K F+C CG F H+A H+ HTG K S
Sbjct: 5 SSGSGEKP-----FKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 1.7
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C CGK+F + HL SH
Sbjct: 1 GSSGSSGSG-EKPFKCKECGKAFRQNIHLASH 31
Score = 28.6 bits (65), Expect = 1.7
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K F+C C K + + L H+ HTGEK
Sbjct: 11 KPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 1.8
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C CG F L H+ HTG K
Sbjct: 14 KCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 4.2
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ +G K +KC C + HL H H
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35
Score = 27.1 bits (61), Expect = 5.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
+C CGK+F N HL H
Sbjct: 13 FKCKECGKAFRQNIHLASH 31
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 52.9 bits (128), Expect = 4e-09
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTC 1122
+ TGE PY C CG F K L H + H+G+ +
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 52.5 bits (127), Expect = 6e-09
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVC 503
+ TGE P+ C CG + K L H + H+G+
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 52.1 bits (126), Expect = 8e-09
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMC 749
+ TGE PY C CG F K L H + H+G+
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 44.4 bits (106), Expect = 3e-06
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG PY C C K F++K L H+K H
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35
Score = 44.0 bits (105), Expect = 5e-06
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + C CGK F +K L H++ H+G +
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 42.9 bits (102), Expect = 1e-05
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAG 771
G GE PY C ECG+ F+ + H K H+G
Sbjct: 1 GSSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 42.5 bits (101), Expect = 2e-05
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
TGE Y C CGK + +L H TH+G+ +
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 41.7 bits (99), Expect = 3e-05
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 436 AHMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGC 475
+ TGE P C CGK + +L H TH+G+
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ +GE C CGK + +L H TH+G+ +
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 38.6 bits (91), Expect = 4e-04
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE PY C CG F+ + H K H+
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHS 36
Score = 37.9 bits (89), Expect = 8e-04
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE P+ C ECG+ F+ + H K H+G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 36.3 bits (85), Expect = 0.003
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+ Y C CG K L +H + H+G+
Sbjct: 9 GENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 32.1 bits (74), Expect = 0.082
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ P++C CGK F + LV H+ + H G
Sbjct: 7 GTGENPYECCECGKVFSRKDQLVSHQ-KTHSGQS 39
Score = 31.3 bits (72), Expect = 0.16
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC C +S K QL+ H +H+G
Sbjct: 14 ECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 29.8 bits (68), Expect = 0.67
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
EC CG +F+ K L H TH+G
Sbjct: 14 ECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 29.0 bits (66), Expect = 1.3
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
+EC C K + + L H H+G+ G
Sbjct: 11 NPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 28.2 bits (64), Expect = 2.1
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGELPPS 636
++ TG Y+C C +S L H+ H +G+ PS
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTH---SGQSGPS 42
Score = 26.7 bits (60), Expect = 7.1
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+S TG PY C C + L H K H
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35
Score = 26.3 bits (59), Expect = 9.5
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIKNHVC 360
+EC CG F + + H +H+G
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.9 bits (128), Expect = 4e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG + + L H HTG++P +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 52.1 bits (126), Expect = 8e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG +F +S L H H G++P S
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 51.0 bits (123), Expect = 2e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG F + L H H G++P S
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 46.8 bits (112), Expect = 6e-07
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K F+ +S+L H+ +H
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35
Score = 45.6 bits (109), Expect = 2e-06
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 437 HMRIHTGERPVCCHICGKKL--RGKLKDHMLTHTGERPFGCE 476
TGE+P C+ CGK R L H HTG++P G
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 45.2 bits (108), Expect = 2e-06
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F + L H+ +HTG KP
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 44.1 bits (105), Expect = 6e-06
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C+ CGK +R L H HTG++P
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 41.7 bits (99), Expect = 4e-05
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C++CG++F+ RS+ + H H G K
Sbjct: 1 GSSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK 39
Score = 41.7 bits (99), Expect = 4e-05
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY CN CG +F+ R + H HT
Sbjct: 1 GSSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHT 36
Score = 41.4 bits (98), Expect = 6e-05
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +GEK C+ CGK R L H HTG++P
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 37.5 bits (88), Expect = 0.001
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C++CG++F+ RS+ + H H G
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG 37
Score = 36.7 bits (86), Expect = 0.002
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG V+S+L H IHTG++P
Sbjct: 9 GEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 31.7 bits (73), Expect = 0.12
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F + L H+ +H G K
Sbjct: 6 SGTGEKPYECNQCGKAFSVRSSLTTHQ-AIHTGKK 39
Score = 31.3 bits (72), Expect = 0.20
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
EC+ C +S +S L H HTG KP
Sbjct: 14 ECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 30.6 bits (70), Expect = 0.30
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
ECN CG F+ + +L H HTG K
Sbjct: 14 ECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 29.4 bits (67), Expect = 0.89
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K +EC CG F R+ + H HTG K S
Sbjct: 2 SSGS-SGTGEKP-----YECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 27.1 bits (61), Expect = 6.6
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K +EC C K + R L H HTG+K
Sbjct: 11 KPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.9 bits (128), Expect = 5e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ +GE+P+ C CG + +L H R HTG RP +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 52.5 bits (127), Expect = 6e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ +GE+PY C CG +F ++L H R H G RP S
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 50.6 bits (122), Expect = 2e-08
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ +GE+PY C CG F +L H R H G RP S
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 48.6 bits (117), Expect = 1e-07
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + + C CGK F + +L EH+R+HTGY+P
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 46.0 bits (110), Expect = 1e-06
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G KPY C C K F + + LN HR++H
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35
Score = 44.4 bits (106), Expect = 4e-06
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 437 HMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGCE 476
+GE+P C CGK L +H HTG RP G
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 44.0 bits (105), Expect = 6e-06
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
+GE+ Y C CGK L EH HTG RP
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 41.7 bits (99), Expect = 4e-05
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 1055 QHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ SGEK C CGK LNEH HTG RP
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 39.8 bits (94), Expect = 2e-04
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 737 HMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
+GE+PY CSECG++F + + H + H G++
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR 39
Score = 38.2 bits (90), Expect = 6e-04
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GE+PY C+ CG +F N H + HT
Sbjct: 1 GSSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHT 36
Score = 36.7 bits (86), Expect = 0.002
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GE+P+ CSECG++F + + H + H G
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG 37
Score = 35.2 bits (82), Expect = 0.009
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG ++L H RIHTG RP
Sbjct: 9 GEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 33.6 bits (78), Expect = 0.029
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S +P++C CGK F HL +H RR+H G +
Sbjct: 6 SGSGEKPYKCSECGKAFHRHTHLNEH-RRIHTGYR 39
Score = 29.8 bits (68), Expect = 0.73
Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 6/49 (12%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F TH+ +H HTG + S
Sbjct: 2 SS-GSSGSGEKP-----YKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 29.0 bits (66), Expect = 1.1
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C C + + L +H HTG +P
Sbjct: 14 KCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 28.6 bits (65), Expect = 1.5
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ +G K YKC C + HL H+ H
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35
Score = 27.8 bits (63), Expect = 2.8
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+C+ CG F L +H HTG +
Sbjct: 14 KCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 27.5 bits (62), Expect = 5.1
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C CGK+F R HL H
Sbjct: 1 GSSGSSGSG-EKPYKCSECGKAFHRHTHLNEH 31
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 5e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG + +L H HTGE+P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 51.3 bits (124), Expect = 2e-08
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG F S+L H H GE+P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 7e-08
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG F +L H H GE+P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 7e-07
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K FTQ S L HR +H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35
Score = 46.3 bits (111), Expect = 9e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F Q +L H+ +HTG KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C+ CGK L H HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 1e-04
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C+ECG+ F S H H G K
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEK 39
Score = 37.8 bits (89), Expect = 8e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +GEK C+ CGK L H HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/34 (38%), Positives = 14/34 (41%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY CN CG F H HT
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHT 36
Score = 36.3 bits (85), Expect = 0.003
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C+ECG+ F S H H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG 37
Score = 34.4 bits (80), Expect = 0.014
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG S+L H IHTGE+P
Sbjct: 9 GEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.075
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F HLV+H R +H G K
Sbjct: 6 SGTGEKPYKCNECGKVFTQNSHLVRH-RGIHTGEK 39
Score = 31.3 bits (72), Expect = 0.19
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C+ C ++ S L+ H HTG KP
Sbjct: 14 KCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.75
Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F +H+ H HTG K S
Sbjct: 4 GSSGTGEKP-----YKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 1.9
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+CN CG +F L H HTG K
Sbjct: 14 KCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 27.8 bits (63), Expect = 2.9
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC+ C ++ HL RH+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35
Score = 27.1 bits (61), Expect = 6.3
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 1812 AHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C+ CGK F + HL H
Sbjct: 2 SSGSSGTG-EKPYKCNECGKVFTQNSHLVRH 31
Score = 26.7 bits (60), Expect = 7.4
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 1681 QCDTCGKSFTGNNHLKRH 1698
+C+ CGK FT N+HL RH
Sbjct: 14 KCNECGKVFTQNSHLVRH 31
Score = 26.7 bits (60), Expect = 9.8
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K ++C C K + L H HTGEK
Sbjct: 11 KPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Length = 42
Score = 52.3 bits (126), Expect = 6e-09
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 1085 THTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFT 1121
+ GE PY C CG SF + L +H R + P +
Sbjct: 5 SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 50.7 bits (122), Expect = 2e-08
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 712 THTGERPYACEICGGTFKTKWYLGVHMRKHNGERPY 747
+ GE PY C CG +F + L VH R + P
Sbjct: 5 SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 50.4 bits (121), Expect = 3e-08
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 466 THTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPY 501
+ GE P+ C CG ++ + LAVH R + P
Sbjct: 5 SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 45.7 bits (109), Expect = 1e-06
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
G PY C C K FTQ+ +L +H++
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34
Score = 43.4 bits (103), Expect = 8e-06
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 737 HMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
GE PY+C +CG+SF R + ++H + +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 42.7 bits (101), Expect = 1e-05
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 1269 FTCEVCGKGFIQKRYLEEHKRVHTGYKPYA 1298
+ C CGK F Q+ L H+R + P +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 42.7 bits (101), Expect = 2e-05
Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 687 HTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYA 720
GE Y C CGK RG L H + + P +
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 41.1 bits (97), Expect = 6e-05
Identities = 12/40 (30%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 436 AHMRIHTGERPVCCHICGKKL--RGKLKDHMLTHTGERPF 473
GE P C CGK RG L H + + P
Sbjct: 1 GSSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 40.7 bits (96), Expect = 7e-05
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE P+ C +CG+SF R + ++H + +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 39.6 bits (93), Expect = 2e-04
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
GE PY+C CG SF R + +H + +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS 35
Score = 39.2 bits (92), Expect = 3e-04
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERP 446
G+ YLC CG + +L H R + P
Sbjct: 8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP 39
Score = 38.8 bits (91), Expect = 4e-04
Identities = 11/40 (27%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 1056 HMETHSGEKKICCHICGKKL--RGRLNEHMLTHTGERPYA 1093
+ GE C CGK RG L H + + P +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 31.9 bits (73), Expect = 0.11
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
P++C C K FT +G+L VH
Sbjct: 11 PYLCGQCGKSFTQRGSLAVH 30
Score = 30.3 bits (69), Expect = 0.36
Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
P+ C CGK F + L H+ R
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVHQ-RSCSQSG 38
Score = 29.2 bits (66), Expect = 1.1
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Query: 1036 GNKCHICKVCGA--KIKGNLQQHMETHSGEK 1064
G ++C CG +G+L H + S
Sbjct: 8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 28.4 bits (64), Expect = 1.8
Identities = 6/29 (20%), Positives = 11/29 (37%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEK 212
+ C C K++ R L H + +
Sbjct: 10 TPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 28.0 bits (63), Expect = 2.4
Identities = 6/26 (23%), Positives = 11/26 (42%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK 603
C CG F + +L H + + +
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 28.0 bits (63), Expect = 2.5
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIK 356
+ C CG F R +A H S +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 28.0 bits (63), Expect = 2.8
Identities = 6/28 (21%), Positives = 10/28 (35%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPY 43
C C ++ + L H S + P
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 27.2 bits (61), Expect = 5.2
Identities = 8/33 (24%), Positives = 11/33 (33%), Gaps = 2/33 (6%)
Query: 663 GNKYHSCKVCGAEI--KGSLKEHMIVHTGERKY 693
G + C CG +GSL H +
Sbjct: 8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 27.2 bits (61), Expect = 5.6
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIH 1817
P+ C C K F + +LA H++
Sbjct: 11 PYLCGQCGKSFTQRGSLAVHQRSC 34
Score = 26.9 bits (60), Expect = 6.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
+ C CGKSFT L H
Sbjct: 12 YLCGQCGKSFTQRGSLAVH 30
Score = 26.5 bits (59), Expect = 9.8
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLH 1673
P+ C C K F + +L H++
Sbjct: 11 PYLCGQCGKSFTQRGSLAVHQRSC 34
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 52.6 bits (127), Expect = 6e-09
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVC 503
+ + + C CG + K +L H R HTGE+P
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 52.6 bits (127), Expect = 6e-09
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ + + + C CG F KS+L H R H GE+P S
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 52.2 bits (126), Expect = 7e-09
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ + + + C CG F K +L H R H GE+P S
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 2e-07
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ ++ + C CG+GF K +L +H+R+HTG KP
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 46.8 bits (112), Expect = 6e-07
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+ K + C C + FT KS LN H+++H
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 45.2 bits (108), Expect = 2e-06
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 437 HMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGC 475
+ + CH CG+ L+ L H HTGE+P G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 43.7 bits (104), Expect = 9e-06
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ S K CH CG+ L+ LN+H HTGE+P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 42.9 bits (102), Expect = 2e-05
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
+ + + CH CG+ ++ L +H HTGE+P
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 5e-05
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G + + + C ECG+ F +S + H + H G K
Sbjct: 1 GSSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 39.1 bits (92), Expect = 3e-04
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+ + + C+ CG F + N H + HT
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHT 36
Score = 37.5 bits (88), Expect = 0.001
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
K + C CG +KS+L H RIHTGE+P
Sbjct: 9 STKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+ + C ECG+ F +S + H + H G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 36.4 bits (85), Expect = 0.003
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
S + HQC CG+ F + HL QH +R+H G K
Sbjct: 7 GSSTKSHQCHECGRGFTLKSHLNQH-QRIHTGEK 39
Score = 31.4 bits (72), Expect = 0.19
Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQE 629
++ + K ++C C G++ HL +H+ H E
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGE 38
Score = 30.2 bits (69), Expect = 0.54
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
HQC CG+ FT +HL +H
Sbjct: 13 HQCHECGRGFTLKSHLNQH 31
Score = 29.8 bits (68), Expect = 0.62
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
+C CG F ++H+ H HTG K S
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.89
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+CH C ++ KS L H HTG KP
Sbjct: 14 QCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.93
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 204 HINNHTGEKGHICEICNRDFYSDAMLKRHLVKHSR 238
++ + K H C C R F LK HL +H R
Sbjct: 3 SGSSGSSTKSHQCHECGRGFT----LKSHLNQHQR 33
Score = 28.7 bits (65), Expect = 1.7
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+S + K + CH C + LK HL +H
Sbjct: 3 SGSSGSSTKSHQCHECGRGFT----LKSHLNQH 31
Score = 28.7 bits (65), Expect = 1.7
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK 603
+C+ CG F K L H HTG K
Sbjct: 14 QCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 27.5 bits (62), Expect = 3.9
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 1036 GNKCHICKVCGA--KIKGNLQQHMETHSGEK 1064
K H C CG +K +L QH H+GEK
Sbjct: 9 STKSHQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 26.7 bits (60), Expect = 7.5
Identities = 9/32 (28%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ K+ QC CG+ F HL H
Sbjct: 1 GSSGSSG-SSTKSHQCHECGRGFTLKSHLNQH 31
Score = 26.7 bits (60), Expect = 8.0
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K +C C + + + L H HTGEK
Sbjct: 11 KSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 9.0
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIH 1817
H C C + F K L H++IH
Sbjct: 12 SHQCHECGRGFTLKSHLNQHQRIH 35
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 6e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG + +LA H HTGE+P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 3e-08
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG F S+L H H GE+P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 9e-08
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG F +L H H GE+P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 7e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F Q +L H+ +HTG KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 8e-07
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K FTQ S L HR +H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 44.4 bits (106), Expect = 4e-06
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCE 476
+ TGE+P C+ CGK L H HTGE+P G
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 3e-05
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C+ CGK L H HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 2e-04
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C+ECG+ F S + H H G K
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 37.9 bits (89), Expect = 9e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +GEK C+ CGK L H HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/36 (36%), Positives = 14/36 (38%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY CN CG F H HT
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHT 36
Score = 36.3 bits (85), Expect = 0.003
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C+ECG+ F S + H H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG 37
Score = 34.0 bits (79), Expect = 0.018
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG S+L H IHTGE+P
Sbjct: 9 GEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.11
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F HL +H R +H G K
Sbjct: 6 SGTGEKPYKCNECGKVFTQNSHLARH-RGIHTGEK 39
Score = 31.3 bits (72), Expect = 0.18
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C+ C ++ S L H HTG KP
Sbjct: 14 KCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.69
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F +H+A H HTG K S
Sbjct: 4 GSSGTGEKP-----YKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 1.6
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C+ CGK F + HL H
Sbjct: 1 GSSGSSGTG-EKPYKCNECGKVFTQNSHLARH 31
Score = 28.6 bits (65), Expect = 1.7
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+CN CG +F L H HTG K
Sbjct: 14 KCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 2.0
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC+ C ++ HL RH+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 27.1 bits (61), Expect = 6.3
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 1681 QCDTCGKSFTGNNHLKRH 1698
+C+ CGK FT N+HL RH
Sbjct: 14 KCNECGKVFTQNSHLARH 31
Score = 26.7 bits (60), Expect = 7.9
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K ++C C K + L H HTGEK
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 7e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TGE+P+ C CG + +LA H R HTG +P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 50.6 bits (122), Expect = 3e-08
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TGE+PY C CG F S+L H R H G +P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 49.4 bits (119), Expect = 6e-08
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TGE+PY C CG F +L H R H G +P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 47.1 bits (113), Expect = 5e-07
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K FTQ S L HR++H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35
Score = 46.4 bits (111), Expect = 8e-07
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F Q +L H+RVHTG KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 44.4 bits (106), Expect = 5e-06
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCE 476
+ TGE+P C+ CGK L H HTG +P G
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 42.5 bits (101), Expect = 2e-05
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TGE+ Y C+ CGK L H HTG +P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 39.4 bits (93), Expect = 3e-04
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G GE+PY C+ECG+ F S + H + H G K
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGK 39
Score = 38.3 bits (90), Expect = 6e-04
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +GEK C+ CGK L H HTG +P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TGE+PY CN CG F H + HT
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHT 36
Score = 36.0 bits (84), Expect = 0.004
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE+P+ C+ECG+ F S + H + H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG 37
Score = 34.0 bits (79), Expect = 0.023
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C CG S+L H R+HTG +P
Sbjct: 9 GEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 32.5 bits (75), Expect = 0.074
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F HL +H RRVH G K
Sbjct: 6 SGTGEKPYKCNECGKVFTQNSHLARH-RRVHTGGK 39
Score = 31.0 bits (71), Expect = 0.22
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C+ C ++ S L H HTG KP
Sbjct: 14 KCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 29.8 bits (68), Expect = 0.76
Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 314 HERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F +H+A H HTG K S
Sbjct: 2 SSGSSGTGEKP-----YKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 29.4 bits (67), Expect = 1.00
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+CN CG +F L H HTG K
Sbjct: 14 KCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 28.6 bits (65), Expect = 1.5
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ +K +C+ CGK F + HL H
Sbjct: 1 GSSGSSGTG-EKPYKCNECGKVFTQNSHLARH 31
Score = 28.6 bits (65), Expect = 1.8
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC+ C ++ HL RH+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35
Score = 27.1 bits (61), Expect = 5.5
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
++C+ CGK FT N+HL RH
Sbjct: 13 YKCNECGKVFTQNSHLARH 31
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 8e-09
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCN 504
+ TG++P+ C CG + +LA H HTGE+P +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCS 1123
+ TG++PY C CG F S+L H H GE+P S
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 7e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCS 750
+ TG++PY C CG F +L H H GE+P S
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 4e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + + C CGK F Q +L H+ +HTG KP
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 7e-07
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
TG KPY C+ C K FTQ S L HR +H
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 44.0 bits (105), Expect = 6e-06
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 436 AHMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCE 476
+ TG++P C+ CGK L H HTGE+P G
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 3e-05
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYACE 722
TG++ Y C+ CGK L H HTGE+P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 41.3 bits (98), Expect = 5e-05
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
G G++PY C+ECG+ F S + H H G K
Sbjct: 1 GSSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 39.8 bits (94), Expect = 2e-04
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
TG++PY CN CG F H HT
Sbjct: 1 GSSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHT 36
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 1056 HMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
+ +G+K C+ CGK L H HTGE+P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 36.3 bits (85), Expect = 0.003
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
G++P+ C+ECG+ F S + H H G
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG 37
Score = 34.4 bits (80), Expect = 0.015
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G K Y C CG S+L H IHTGE+P
Sbjct: 9 GKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.088
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F HL +H R +H G K
Sbjct: 6 SGTGKKPYKCNECGKVFTQNSHLARH-RGIHTGEK 39
Score = 30.6 bits (70), Expect = 0.40
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYIC 45
+C+ C ++ S L H HTG KP
Sbjct: 14 KCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.69
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCS 361
G K ++C CG F +H+A H HTG K S
Sbjct: 4 GSSGTGKKP-----YKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 1.7
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ K +C+ CGK F + HL H
Sbjct: 1 GSSGSSGTG-KKPYKCNECGKVFTQNSHLARH 31
Score = 28.6 bits (65), Expect = 1.9
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKH 626
++ TG K YKC+ C ++ HL RH+ H
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 28.6 bits (65), Expect = 1.9
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKC 606
+CN CG +F L H HTG K
Sbjct: 14 KCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 7.4
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 1681 QCDTCGKSFTGNNHLKRH 1698
+C+ CGK FT N+HL RH
Sbjct: 14 KCNECGKVFTQNSHLARH 31
Score = 26.7 bits (60), Expect = 7.9
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHICE 217
K ++C C K + L H HTGEK
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 47
Score = 51.8 bits (125), Expect = 1e-08
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRK-HNGERPFTCS 1123
+ TG++PY C CG +F + L H R H GE+P S
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 51.4 bits (124), Expect = 1e-08
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRK-HTGERPYVCN 504
+ TG++P+ C CG + L H R HTGE+P +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 49.9 bits (120), Expect = 5e-08
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRK-HNGERPYMCS 750
+ TG++PY C CG F L H R H GE+P S
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 45.3 bits (108), Expect = 2e-06
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIH-RKLH 1319
TG KPY C C K F Q ++L H R H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 43.3 bits (103), Expect = 1e-05
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 436 AHMRIHTGERPVCCHICGKKLRGK--LKDHM-LTHTGERPFGC 475
+ TG++P C CGK L H HTGE+P G
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 42.9 bits (102), Expect = 2e-05
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKR-VHTGYKPYAC 1299
+ + + C CGK FIQ L H R HTG KP
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 41.0 bits (97), Expect = 6e-05
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHM-LTHTGERPYAC 721
TG++ Y C CGK L H HTGE+P
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 39.5 bits (93), Expect = 2e-04
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKH 769
G G++PY C ECG++F + L +H
Sbjct: 1 GSSGSSGTGKKPYECIECGKAFIQNT----SLIRH 31
Score = 37.9 bits (89), Expect = 0.001
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRH 523
TG++PY C CG +F N L RH
Sbjct: 1 GSSGSSGTGKKPYECIECGKAFIQ----NTSLIRH 31
Score = 37.9 bits (89), Expect = 0.001
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ +P++C CGK F L++H R H G K
Sbjct: 6 SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEK 40
Score = 36.0 bits (84), Expect = 0.004
Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKH 1142
G++P+ C ECG++F + L +H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNT----SLIRH 31
Score = 31.4 bits (72), Expect = 0.20
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMR-IHTGERPVCC 449
G K Y C CG ++L H R HTGE+P
Sbjct: 9 GKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 29.5 bits (67), Expect = 0.85
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 393 YKCDKCDKLFIEQSEMVQHRDWVH-GDKCYLC 423
Y+C +C K FI+ + +++H + H G+K
Sbjct: 13 YECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 28.7 bits (65), Expect = 1.6
Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 16 ECHHCAMRYSSKSQLLDHL-NSHTGLKPYIC 45
EC C + + L+ H HTG KP
Sbjct: 14 ECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 27.9 bits (63), Expect = 3.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQG 863
K + C EC K F L RHW Y H G
Sbjct: 11 KPYECIECGKAFIQNTSLIRHWRYYHTG 38
Score = 27.5 bits (62), Expect = 4.1
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
Query: 316 RRVHLGVKKIKHSNFECFHCGAKFISRTHIADHM-TSHTGIKNHVCS 361
G K +EC CG FI T + H HTG K S
Sbjct: 4 GSSGTGKKP-----YECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 27.5 bits (62), Expect = 5.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 1680 HQCDTCGKSFTGNNHLKRHIYSVH 1703
++C CGK+F N L RH H
Sbjct: 13 YECIECGKAFIQNTSLIRHWRYYH 36
Score = 26.8 bits (60), Expect = 7.1
Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHISSVH 1847
+ K +C CGK+F + L H H
Sbjct: 1 GSSGSSGTG-KKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 26.8 bits (60), Expect = 8.2
Identities = 11/31 (35%), Positives = 12/31 (38%), Gaps = 2/31 (6%)
Query: 578 ECNICGALFATKYTLQDHM-NTHTGNK-YKC 606
EC CG F +L H HTG K
Sbjct: 14 ECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 51.6 bits (123), Expect = 3e-08
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 5/70 (7%)
Query: 432 SNLKAHMRIHTGERPVCCHICGKKLRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVH 491
+ +IH G+R C CG T + + CE C + L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFI-----RRSTLSRRKTPMCEKCRKDSCQEAALNKD 58
Query: 492 MRKHTGERPY 501
+G++
Sbjct: 59 EGNESGKKTS 68
Score = 50.0 bits (119), Expect = 1e-07
Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 5/70 (7%)
Query: 678 GSLKEHMIVHTGERKYCCHICGKKMRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVH 737
GS + +H G+R C CG T + + CE C + L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFI-----RRSTLSRRKTPMCEKCRKDSCQEAALNKD 58
Query: 738 MRKHNGERPY 747
+G++
Sbjct: 59 EGNESGKKTS 68
Score = 48.1 bits (114), Expect = 4e-07
Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 7/70 (10%)
Query: 704 GKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFS 763
G + H G+R C CG F + + + MC +C + +A +
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALN 56
Query: 764 LHLKKHAGFK 773
+G K
Sbjct: 57 KDEGNESGKK 66
Score = 47.7 bits (113), Expect = 7e-07
Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 7/68 (10%)
Query: 1077 GRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFS 1136
G + H G+R C CG F I + + C +C + +A +
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALN 56
Query: 1137 LHLKKHAG 1144
+G
Sbjct: 57 KDEGNESG 64
Score = 47.3 bits (112), Expect = 7e-07
Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 5/70 (7%)
Query: 1051 GNLQQHMETHSGEKKICCHICGKKLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIH 1110
G+ + + H G++ C CG T + + CE C ++ L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFI-----RRSTLSRRKTPMCEKCRKDSCQEAALNKD 58
Query: 1111 IRKHNGERPF 1120
+G++
Sbjct: 59 EGNESGKKTS 68
Score = 45.4 bits (107), Expect = 4e-06
Identities = 17/68 (25%), Positives = 23/68 (33%), Gaps = 7/68 (10%)
Query: 1252 SPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKST 1311
S IH +R C CG FI++ L K C+ C K Q++
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAA 54
Query: 1312 LNIHRKLH 1319
LN
Sbjct: 55 LNKDEGNE 62
Score = 42.3 bits (99), Expect = 5e-05
Identities = 11/68 (16%), Positives = 18/68 (26%), Gaps = 7/68 (10%)
Query: 458 GKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFN 517
G H G+R C CG + + + + +C C A N
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALN 56
Query: 518 LHLKRHTE 525
+
Sbjct: 57 KDEGNESG 64
Score = 40.8 bits (95), Expect = 1e-04
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 7/60 (11%)
Query: 1284 LEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKFYEFNTYVTH 1343
+ +++H G + C C F ++STL+ + +C+ C +
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT-------PMCEKCRKDSCQEAALNKD 58
Score = 39.3 bits (91), Expect = 6e-04
Identities = 13/74 (17%), Positives = 22/74 (29%), Gaps = 8/74 (10%)
Query: 1225 TSYKRHLKQHDDSVTYYPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYL 1284
S + K H + C+ C + + CE C K Q+ L
Sbjct: 4 GSSGKRQKIHLGDRSQ-KCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAAL 55
Query: 1285 EEHKRVHTGYKPYA 1298
+ + +G K
Sbjct: 56 NKDEGNESGKKTSG 69
Score = 37.3 bits (86), Expect = 0.003
Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 8/58 (13%)
Query: 734 LGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFTFETGL 791
G + H G+R CS+CG F RS S +T CE C E L
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR--------KTPMCEKCRKDSCQEAAL 55
Score = 35.4 bits (81), Expect = 0.013
Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 16/77 (20%)
Query: 372 GLKRHNKNHLREAGVLRADEMYKCDKCDKLFIEQSEMVQHRDWVHGDKCYLCKICGARV- 430
+ K HL D KC KC +FI +S + + K +C+ C
Sbjct: 5 SSGKRQKIHL-------GDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSC 50
Query: 431 -KSNLKAHMRIHTGERP 446
++ L +G++
Sbjct: 51 QEAALNKDEGNESGKKT 67
Score = 35.4 bits (81), Expect = 0.013
Identities = 11/71 (15%), Positives = 19/71 (26%), Gaps = 7/71 (9%)
Query: 406 SEMVQHRDWVHGDKCYLCKICGARVKSNLKAHMRIHTGERPVCCHICGKKL--RGKLKDH 463
+ + GD+ C CG + + C C K L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIF-----IRRSTLSRRKTPMCEKCRKDSCQEAALNKD 58
Query: 464 MLTHTGERPFG 474
+G++ G
Sbjct: 59 EGNESGKKTSG 69
Score = 34.6 bits (79), Expect = 0.030
Identities = 14/70 (20%), Positives = 21/70 (30%), Gaps = 7/70 (10%)
Query: 1026 ALKKHLDWVHGNKCHICKVCGAKIKGNLQQHMETHSGEKKICCHICGKKL--RGRLNEHM 1083
+ K G++ C CG T S K C C K LN+
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFI-----RRSTLSRRKTPMCEKCRKDSCQEAALNKDE 59
Query: 1084 LTHTGERPYA 1093
+G++
Sbjct: 60 GNESGKKTSG 69
Score = 33.1 bits (75), Expect = 0.10
Identities = 15/70 (21%), Positives = 21/70 (30%), Gaps = 15/70 (21%)
Query: 1105 SYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIGYTVFCKECNIG 1164
+ H G+R CS+CG F RS S R C++C
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLS-------------RRKTPM--CEKCRKD 48
Query: 1165 FYSSTHLHSH 1174
L+
Sbjct: 49 SCQEAALNKD 58
Score = 32.3 bits (73), Expect = 0.18
Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 13/72 (18%)
Query: 287 REVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIA 346
+++H R +C CG F + L + + C C +
Sbjct: 10 QKIHLGDRSQKCSKCGIIFIRRSTLSRRK-------------TPMCEKCRKDSCQEAALN 56
Query: 347 DHMTSHTGIKNH 358
+ +G K
Sbjct: 57 KDEGNESGKKTS 68
Score = 31.9 bits (72), Expect = 0.22
Identities = 12/78 (15%), Positives = 18/78 (23%), Gaps = 7/78 (8%)
Query: 1167 SSTHLHSHGIKVHGLPPFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTS 1226
SS G C C F + L+ C C K + +
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKTP-------MCEKCRKDSCQEAA 54
Query: 1227 YKRHLKQHDDSVTYYPCT 1244
+ T P +
Sbjct: 55 LNKDEGNESGKKTSGPSS 72
Score = 31.9 bits (72), Expect = 0.28
Identities = 10/69 (14%), Positives = 18/69 (26%), Gaps = 7/69 (10%)
Query: 654 LRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCCHICGKKM--RGKLKEHML 711
K G++ C CG + + C C K L +
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIFIRRST-----LSRRKTPMCEKCRKDSCQEAALNKDEG 60
Query: 712 THTGERPYA 720
+G++
Sbjct: 61 NESGKKTSG 69
Score = 30.8 bits (69), Expect = 0.70
Identities = 14/81 (17%), Positives = 23/81 (28%), Gaps = 14/81 (17%)
Query: 341 SRTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRADEMYKCDKCDK 400
S H G ++ CS C + L R C+KC K
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT--------------PMCEKCRK 47
Query: 401 LFIEQSEMVQHRDWVHGDKCY 421
+++ + + G K
Sbjct: 48 DSCQEAALNKDEGNESGKKTS 68
Score = 30.4 bits (68), Expect = 0.81
Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 11/69 (15%)
Query: 169 VKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAM 228
+ +K+ H+G + +C+ C + + + K +CE C +D +A
Sbjct: 6 SGKRQKI-HLG---DRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAA 54
Query: 229 LKRHLVKHS 237
L + S
Sbjct: 55 LNKDEGNES 63
Score = 29.6 bits (66), Expect = 1.5
Identities = 15/77 (19%), Positives = 22/77 (28%), Gaps = 12/77 (15%)
Query: 136 SGTDMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTY 195
S + + +H R C CG F + + K C C K
Sbjct: 2 SSGSSGKRQK-IHLGDRSQKCSKCGIIFIRRSTLSRR-----------KTPMCEKCRKDS 49
Query: 196 LSRVGLEDHINNHTGEK 212
L N +G+K
Sbjct: 50 CQEAALNKDEGNESGKK 66
Score = 29.2 bits (65), Expect = 2.0
Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 7/64 (10%)
Query: 1610 LVKHKSRHIKEYTVFCKKCQLGFLSKNELNVHNIKQHDAQPHTCPVCKKIFVNKFNLTTH 1669
K + H+ + + C KC + F+ ++ L+ + C C+K + L
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNKD 58
Query: 1670 KKLH 1673
+
Sbjct: 59 EGNE 62
Score = 29.2 bits (65), Expect = 2.0
Identities = 11/65 (16%), Positives = 17/65 (26%), Gaps = 8/65 (12%)
Query: 1634 SKNELNVHNIKQHDAQPHTCPVCKKIFVNKFNLTTHKKLHLPMNRNHQCDTCGKSFTGNN 1693
S + C C IF+ + L+ K C+ C K
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT--------PMCEKCRKDSCQEA 53
Query: 1694 HLKRH 1698
L +
Sbjct: 54 ALNKD 58
Score = 28.9 bits (64), Expect = 2.7
Identities = 12/72 (16%), Positives = 18/72 (25%), Gaps = 14/72 (19%)
Query: 26 SKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSK 85
S H G + C C ++ L R C+ C K
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT--------------PMCEKCRK 47
Query: 86 MFIEHHAMVKHR 97
+ A+ K
Sbjct: 48 DSCQEAALNKDE 59
Score = 28.9 bits (64), Expect = 3.4
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Query: 951 SKERKCPKCEKEFSTPRYMRKHLRKKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPS 1009
+ +KC KC F + + K C+ C L + + + P S
Sbjct: 16 DRSQKCSKCGIIFIRRSTLSRR--KTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSS 72
Score = 28.5 bits (63), Expect = 3.6
Identities = 13/73 (17%), Positives = 21/73 (28%), Gaps = 14/73 (19%)
Query: 829 KQVHIEIKTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHYCGITKNNKTLL 888
+++H+ ++ C +C IF R L R C C + L
Sbjct: 10 QKIHLGDRSQKCSKCGIIFIRRSTLSRRKTP--------------MCEKCRKDSCQEAAL 55
Query: 889 RDHISAHLGIKPY 901
G K
Sbjct: 56 NKDEGNESGKKTS 68
Score = 28.5 bits (63), Expect = 4.1
Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 10/66 (15%)
Query: 1665 NLTTHKKLHLPMNRNHQCDTCGKSFTGNNHLKRHIYSVHLKRDTKFPCRLCSQEFDTKEQ 1724
+ +K+HL +R+ +C CG F + L R C C ++ +
Sbjct: 5 SSGKRQKIHL-GDRSQKCSKCGIIFIRRSTLSRR---------KTPMCEKCRKDSCQEAA 54
Query: 1725 RKKHER 1730
K E
Sbjct: 55 LNKDEG 60
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET:
ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB:
3znf_A 4znf_A
Length = 57
Score = 50.9 bits (121), Expect = 3e-08
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 719 YACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQ 774
Y CE CG K L H+R H RPY C+ C SF + + H+K A K+
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 49.7 bits (118), Expect = 8e-08
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 1092 YACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
Y CE CG K S L+ HIR H RP+ C+ C SF + + H+K A
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 49.7 bits (118), Expect = 8e-08
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 1269 FTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+ CE CG + L++H R HT +PY C C+ F K L H K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 49.3 bits (117), Expect = 1e-07
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 692 KYCCHICGK--KMRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGER 745
KY C CG K LK+H+ THT RPY C C +FKTK L HM+ +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 48.2 bits (114), Expect = 3e-07
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 1068 CHICGK--KLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGER 1118
C CG K L +H+ THT RPY C +C SFK K L H++ +
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 46.2 bits (109), Expect = 1e-06
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 449 CHICGK--KLRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGER 499
C CG K LK H+ THT RP+ C C ++K K L HM+ +
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 46.2 bits (109), Expect = 1e-06
Identities = 20/50 (40%), Positives = 23/50 (46%)
Query: 475 CEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
CE CG K L H+R HT RPY C YC SF + H+K
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53
Score = 43.2 bits (101), Expect = 1e-05
Identities = 16/55 (29%), Positives = 21/55 (38%)
Query: 1241 YPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYK 1295
Y C C P LK H+ H + R + C C F K L +H + K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 42.8 bits (100), Expect = 2e-05
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 421 YLCKICGARV--KSNLKAHMRIHTGERPVCCHICGKKL--RGKLKDHMLTHTGER 471
Y+C+ CG R S LK H+R HT RP C C +G L HM + +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 38.2 bits (88), Expect = 0.001
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQE 629
C CG L+ H+ THT + Y C C+ + + +L +H
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 38.2 bits (88), Expect = 0.001
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
C C +R S L H+ +HT ++PY C C S+ L +H+K
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 37.8 bits (87), Expect = 0.001
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 185 KFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAMLKRHLVKHS 237
K+ C C L+ HI HT + + C CN F + L +H+ +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53
Score = 36.6 bits (84), Expect = 0.003
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 874 ECHYCGITKNNKTLLRDHISAHLGIKPYCCIFCEEKYFSKKSLKRHEAKH 923
C CGI ++L+ HI H ++PY C +C + +K +L +H
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 36.2 bits (83), Expect = 0.004
Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 393 YKCDKCDKLFIEQSEMVQHRDWVHGDKCYLCKICG--ARVKSNLKAHMRIHTGER 445
Y C++C + S + +H + Y C C + K NL HM+ +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 36.2 bits (83), Expect = 0.005
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 669 CKVCG--AEIKGSLKEHMIVHTGERKYCCHICGKKM--RGKLKEHMLTHTGER 717
C+ CG + LK+H+ HT R Y C C +G L +HM + +
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 36.2 bits (83), Expect = 0.005
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEK 212
CE CG R +K+H + H + + C +C+ ++ ++ L H+ + K
Sbjct: 4 CEECGIRXKKPSMLKKHIRT-HTD---VRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 35.1 bits (80), Expect = 0.014
Identities = 12/54 (22%), Positives = 26/54 (48%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLRE 383
+ C CG + + + H+ +HT ++ + C+ C ++ T L +H K+
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 34.3 bits (78), Expect = 0.026
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 1012 HKCPTCYKIFTENHALKKHLDWVHGNKCHICKVCG--AKIKGNLQQHMETHSGEKK 1065
+ C C + LKKH+ + + C C K KGNL +HM++ + KK
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 33.9 bits (77), Expect = 0.034
Identities = 12/51 (23%), Positives = 21/51 (41%)
Query: 1184 FICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTSYKRHLKQH 1234
+ICE C L H++ + + C C +F K + +H+K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 33.5 bits (76), Expect = 0.042
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 1158 CKECNIGFYSSTHLHSHGIKVHGLPPFICEHCSKPFTSKGNLTVHVK 1204
C+EC I + L H + P+ C +C+ F +KGNLT H+K
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK 50
Score = 33.2 bits (75), Expect = 0.054
Identities = 11/48 (22%), Positives = 20/48 (41%)
Query: 1297 YACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKFYEFNTYVTHV 1344
Y C+ C + + S L H + H +++ + C C F H+
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHM 49
Score = 30.8 bits (69), Expect = 0.37
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
Query: 296 HQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGI 355
+ C+ CG K L +H R H V+ + C +C F ++ ++ HM S
Sbjct: 2 YICEECGIRXKKPSMLKKH-IRTHTDVRP-----YHCTYCNFSFKTKGNLTKHMKSKAHS 55
Query: 356 K 356
K
Sbjct: 56 K 56
Score = 30.1 bits (67), Expect = 0.68
Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Query: 955 KCPKCEKEFSTPRYMRKHLR-----KKFKCDVCGNGYTSVKHLKRHKIKHMKE 1002
C +C P ++KH+R + + C C + + +L +H
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 30.1 bits (67), Expect = 0.69
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 268 TCPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKK 324
C C + ++ HIR H+ VRP+ C C FK++ +L +H + KK
Sbjct: 3 ICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKH-MKSKAHSKK 57
Score = 28.1 bits (62), Expect = 3.8
Identities = 12/45 (26%), Positives = 15/45 (33%)
Query: 1597 CDLCSYTSTRKYYLVKHKSRHIKEYTVFCKKCQLGFLSKNELNVH 1641
C+ C + L KH H C C F +K L H
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKH 48
Score = 28.1 bits (62), Expect = 4.0
Identities = 10/46 (21%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECDKIFATREKLQRH 856
C +C +++H++ H +++ + C C+ F T+ L +H
Sbjct: 4 CEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKH 48
Score = 27.8 bits (61), Expect = 5.1
Identities = 14/64 (21%), Positives = 21/64 (32%), Gaps = 15/64 (23%)
Query: 1826 CDVCGKSFARTFHLKSHISSVHLKREQRKKHERKDHETQGLFSCDLCSYTSTQKYYLVKH 1885
C+ CG + LK HI + H + C C+++ K L KH
Sbjct: 4 CEECGIRXKKPSMLKKHI---------------RTHTDVRPYHCTYCNFSFKTKGNLTKH 48
Query: 1886 KSRH 1889
Sbjct: 49 MKSK 52
Score = 27.4 bits (60), Expect = 6.1
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 1651 HTCPVCKKIFVNKFNLTTHKKLHLPMNRNHQCDTCGKSFTGNNHLKRHI 1699
+ C C L H + H R + C C SF +L +H+
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTD-VRPYHCTYCNFSFKTKGNLTKHM 49
Score = 27.4 bits (60), Expect = 8.1
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 126 KCPICGDRYKSGTDMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKV 175
C CG R K + +++H R H R C C F + + +H K
Sbjct: 3 ICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKS 51
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 41
Score = 49.5 bits (119), Expect = 5e-08
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 1085 THTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFT 1121
+G+R Y C+ CG SF+ K L +H R H G P +
Sbjct: 4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 48.3 bits (116), Expect = 2e-07
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 466 THTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPY 501
+G+R + C+ CG +++ K L +H R HTG P
Sbjct: 4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 47.2 bits (113), Expect = 4e-07
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 712 THTGERPYACEICGGTFKTKWYLGVHMRKHNGERPY 747
+G+R Y C+ CG +F+ K L +H R H G P
Sbjct: 4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 43.7 bits (104), Expect = 7e-06
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 1269 FTCEVCGKGFIQKRYLEEHKRVHTGYKPYA 1298
+ C+ CGK F QK L H+R+HTG P +
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 42.2 bits (100), Expect = 2e-05
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 1288 KRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G + Y C C K F QK +L +H ++H
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIH 33
Score = 40.6 bits (96), Expect = 9e-05
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 687 HTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYA 720
+G+R Y C CGK + +G L H HTG P +
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 39.5 bits (93), Expect = 2e-04
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 739 RKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
+G+R Y C ECG+SF + + +LH + H G
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 38.3 bits (90), Expect = 6e-04
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERP 446
G + Y C+ CG R K +L H RIHTG P
Sbjct: 7 GQRVYECQECGKSFRQKGSLTLHERIHTGSGP 38
Score = 36.8 bits (86), Expect = 0.002
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1112 RKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+G+R + C ECG+SF + + +LH + H G
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTG 35
Score = 36.4 bits (85), Expect = 0.002
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 493 RKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+G+R Y C CG SF + + LH + HT
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHT 34
Score = 36.0 bits (84), Expect = 0.004
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 439 RIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPF 473
+G+R C CGK + +G L H HTG P
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 36.0 bits (84), Expect = 0.004
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 1059 THSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYA 1093
SG++ C CGK + +G L H HTG P +
Sbjct: 4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 32.9 bits (76), Expect = 0.040
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 294 RPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
R ++C+ CGK F+ + L HE R+H G
Sbjct: 9 RVYECQECGKSFRQKGSLTLHE-RIHTGSG 37
Score = 29.8 bits (68), Expect = 0.59
Identities = 10/28 (35%), Positives = 11/28 (39%)
Query: 16 ECHHCAMRYSSKSQLLDHLNSHTGLKPY 43
EC C + K L H HTG P
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 28.3 bits (64), Expect = 2.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 1183 PFICEHCSKPFTSKGNLTVH 1202
+ C+ C K F KG+LT+H
Sbjct: 10 VYECQECGKSFRQKGSLTLH 29
Score = 27.5 bits (62), Expect = 3.6
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEK 212
+ +EC C K++ + L H HTG
Sbjct: 9 RVYECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 27.5 bits (62), Expect = 4.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 578 ECNICGALFATKYTLQDHMNTHTGNK 603
EC CG F K +L H HTG+
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 27.2 bits (61), Expect = 5.2
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIK 356
+EC CG F + + H HTG
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSG 37
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 48
Score = 48.8 bits (116), Expect = 1e-07
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 1085 THTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSEC 1125
+ + ACE CG F+D +L H H+GE+P++
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 46.9 bits (111), Expect = 7e-07
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 712 THTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSEC 752
+ + ACEICG F+ ++L H H+GE+PY
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 46.1 bits (109), Expect = 1e-06
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 1263 HANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCS 1303
+ CE+CGK F +L HK H+G KPY+ S
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 44.5 bits (105), Expect = 5e-06
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 466 THTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYC 506
+ + CE+CG ++ Y+L H H+GE+PY
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 43.4 bits (102), Expect = 1e-05
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 687 HTGERKYCCHICGKKMRGK--LKEHMLTHTGERPYACEICGG 726
++ C ICGK R L H L+H+GE+PY+ G
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG 48
Score = 39.9 bits (93), Expect = 2e-04
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 1059 THSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACEFC 1097
+ K++ C ICGK R LN H L+H+GE+PY+
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 38.8 bits (90), Expect = 5e-04
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 439 RIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCEVC 478
+ V C ICGK R L H L+H+GE+P+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 36.8 bits (85), Expect = 0.003
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 1289 RVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLC 1330
K AC++C K F LN H+ H K +
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 35.3 bits (81), Expect = 0.009
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCCHIC 452
K C+ICG R +L H H+GE+P
Sbjct: 9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 34.9 bits (80), Expect = 0.012
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 970 RKHLRKKFKCDVCGNGYTSVKHLKRHKIKHMKE 1002
RK+ C++CG + V HL RHK+ H E
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGE 38
Score = 33.4 bits (76), Expect = 0.038
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 1677 NRNHQCDTCGKSFTGNNHLKRHIYS 1701
+ C+ CGK F HL RH S
Sbjct: 10 RKQVACEICGKIFRDVYHLNRHKLS 34
Score = 33.0 bits (75), Expect = 0.048
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 568 QSHKKRDQKIECNICGALFATKYTLQDHMNTHTGNK-YKCDVC 609
S + +++ C ICG +F Y L H +H+G K Y
Sbjct: 4 GSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 32.6 bits (74), Expect = 0.083
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 181 KQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICN 220
+ +K+ C C K + L H +H+GEK + +
Sbjct: 8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 31.8 bits (72), Expect = 0.13
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 1822 KNCQCDVCGKSFARTFHLKSH 1842
K C++CGK F +HL H
Sbjct: 11 KQVACEICGKIFRDVYHLNRH 31
Score = 31.1 bits (70), Expect = 0.23
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 663 GNKYHSCKVCGAEIKGS--LKEHMIVHTGERKYCCHIC 698
K +C++CG + L H + H+GE+ Y
Sbjct: 9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 31.1 bits (70), Expect = 0.28
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 17 CHHCAMRYSSKSQLLDHLNSHTGLKPYICHIC 48
C C + L H SH+G KPY
Sbjct: 15 CEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 30.7 bits (69), Expect = 0.32
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 603 KYKCDVCDNGYSSLKHLKRHKMKHLQE 629
+ C++C + + HL RHK+ H E
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGE 38
Score = 30.7 bits (69), Expect = 0.35
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 1241 YPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVC 1274
C +C K Y L H L H+ + ++
Sbjct: 13 VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 30.3 bits (68), Expect = 0.50
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 329 NFECFHCGAKFISRTHIADHMTSHTGIKNHVCSIC 363
C CG F H+ H SH+G K +
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 29.9 bits (67), Expect = 0.72
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 294 RPHQCKGCGKYFKSQRHLVQHERRVHLGVK 323
+ C+ CGK F+ HL +H + H G K
Sbjct: 11 KQVACEICGKIFRDVYHLNRH-KLSHSGEK 39
Score = 29.9 bits (67), Expect = 0.78
Identities = 9/35 (25%), Positives = 12/35 (34%), Gaps = 4/35 (11%)
Query: 1112 RKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSH 1146
+ C CG+ F HL +H SH
Sbjct: 5 SSGRTRKQVACEICGKIFRDVY----HLNRHKLSH 35
Score = 29.5 bits (66), Expect = 0.79
Identities = 7/32 (21%), Positives = 9/32 (28%)
Query: 493 RKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+ C CG F N H H+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHS 36
Score = 29.1 bits (65), Expect = 1.4
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 207 NHTGEKGHICEICNRDFYSDAMLKRHLVKHS 237
+ K CEIC + F L RH + HS
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHS 36
Score = 29.1 bits (65), Expect = 1.5
Identities = 8/35 (22%), Positives = 12/35 (34%)
Query: 739 RKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFK 773
+ C CG+ F + H H+G K
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 28.4 bits (63), Expect = 2.3
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1036 GNKCHICKVCGA--KIKGNLQQHMETHSGEKKICCHIC 1071
K C++CG + +L +H +HSGEK
Sbjct: 9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 28.4 bits (63), Expect = 2.7
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 1644 KQHDAQPHTCPVCKKIFVNKFNLTTHKKLH 1673
+ C +C KIF + ++L HK H
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSH 35
Score = 26.8 bits (59), Expect = 8.4
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 350 TSHTGIKNHVCSICQSTYTTARGLKRHNKNH 380
+S K C IC + L RH +H
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSH 35
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 48.5 bits (116), Expect = 1e-07
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 1085 THTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTC 1122
+GE+PY+C C +F D + L H + H + +
Sbjct: 4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 47.3 bits (113), Expect = 3e-07
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 466 THTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVC 503
+GE+P+ C C T+ L H + HT +
Sbjct: 4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 44.6 bits (106), Expect = 3e-06
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 712 THTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMC 749
+GE+PY+C C TF L H + H +
Sbjct: 4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 41.5 bits (98), Expect = 5e-05
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 1288 KRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G KPY+C C + F+ + L H+K+H
Sbjct: 2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMH 33
Score = 38.8 bits (91), Expect = 4e-04
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 741 HNGERPYMCSECGQSFAARSAFSLHLKKHAG 771
+GE+PY C+EC ++F+ + H K H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTV 35
Score = 37.7 bits (88), Expect = 0.001
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 1114 HNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+GE+P++C+EC ++F+ + H K H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTV 35
Score = 36.9 bits (86), Expect = 0.002
Identities = 7/37 (18%), Positives = 17/37 (45%)
Query: 1263 HANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+ + ++C C + F L +H+++HT +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 35.8 bits (83), Expect = 0.004
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Query: 687 HTGERKYCCHICGKKMRGK--LKEHMLTHTGERPYAC 721
+GE+ Y C C + L +H HT + +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 35.8 bits (83), Expect = 0.005
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 495 HTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+GE+PY C C +F+ H K HT
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHT 34
Score = 34.2 bits (79), Expect = 0.016
Identities = 9/39 (23%), Positives = 13/39 (33%), Gaps = 2/39 (5%)
Query: 439 RIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGC 475
+GE+P C C + L H HT +
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 32.3 bits (74), Expect = 0.074
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHERRVHLG 321
S +P+ C C + F LVQH +++H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQH-QKMHTV 35
Score = 31.1 bits (71), Expect = 0.21
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
G+K Y C C + L H ++HT +
Sbjct: 7 GEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 30.0 bits (68), Expect = 0.57
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 598 THTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENG 631
+G K Y C C +S L +H+ H ++G
Sbjct: 4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSG 38
Score = 28.1 bits (63), Expect = 2.5
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 36 SHTGLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLS 73
+G KPY C CK ++ L +H K H +G S
Sbjct: 4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 27.7 bits (62), Expect = 3.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 1794 PHTCPVCKKIFVNKVTLAAHKKIH 1817
P++C CK+ F + L H+K+H
Sbjct: 10 PYSCAECKETFSDNNRLVQHQKMH 33
Score = 27.3 bits (61), Expect = 4.5
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEKGHIC 216
K + CA C +T+ L H HT + G
Sbjct: 9 KPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 27.3 bits (61), Expect = 5.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
+ C C ++F+ NN L +H
Sbjct: 11 YSCAECKETFSDNNRLVQH 29
Score = 26.9 bits (60), Expect = 6.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 1650 PHTCPVCKKIFVNKFNLTTHKKLH 1673
P++C CK+ F + L H+K+H
Sbjct: 10 PYSCAECKETFSDNNRLVQHQKMH 33
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 46.8 bits (112), Expect = 5e-07
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 1081 EHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTC 1122
+ T + Y C CG +F +L H + H + +
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 8/42 (19%), Positives = 16/42 (38%)
Query: 462 DHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVC 503
+ T + + C CG + ++L H + HT +
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 44.9 bits (107), Expect = 2e-06
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 1286 EHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
T K Y C+ C K FT+ L H+K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35
Score = 44.5 bits (106), Expect = 4e-06
Identities = 9/42 (21%), Positives = 15/42 (35%)
Query: 708 EHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMC 749
+ T + Y C CG F ++L H + H +
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 40.3 bits (95), Expect = 1e-04
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAG 771
G + Y C+ECG++F + H K H
Sbjct: 1 GSSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 39.5 bits (93), Expect = 2e-04
Identities = 11/36 (30%), Positives = 13/36 (36%)
Query: 489 AVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
T + Y CN CG +F H K HT
Sbjct: 1 GSSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT 36
Score = 38.3 bits (90), Expect = 5e-04
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 1259 HMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYAC 1299
+++ + C CGK F + +L H+++HT +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 37.9 bits (89), Expect = 8e-04
Identities = 9/41 (21%), Positives = 12/41 (29%), Gaps = 2/41 (4%)
Query: 437 HMRIHTGERPVCCHICGK--KLRGKLKDHMLTHTGERPFGC 475
T + C+ CGK L H HT +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 37.6 bits (88), Expect = 0.001
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
+ + C+ECG++F + H K H
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 37.6 bits (88), Expect = 0.001
Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 682 EHMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERPYAC 721
T + Y C+ CGK L H HT + +
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 34.9 bits (81), Expect = 0.008
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 1055 QHMETHSGEKKICCHICGK--KLRGRLNEHMLTHTGERPYAC 1094
+ + K C+ CGK L H HT + +
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 32.2 bits (74), Expect = 0.078
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 289 VHSKVRPHQCKGCGKYFKSQRHLVQHER 316
+ + + C CGK F HL +H++
Sbjct: 6 SGTDSKSYNCNECGKAFTRIFHLTRHQK 33
Score = 32.2 bits (74), Expect = 0.080
Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 594 DHMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENG 631
++ T +K Y C+ C ++ + HL RH+ H +++G
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSG 40
Score = 31.8 bits (73), Expect = 0.12
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 417 GDKCYLCKICGA--RVKSNLKAHMRIHTGERPVCC 449
K Y C CG +L H +IHT +
Sbjct: 9 DSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 29.5 bits (67), Expect = 0.71
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 1811 AAHKKIHLPIDKNCQCDVCGKSFARTFHLKSH 1842
+ K+ C+ CGK+F R FHL H
Sbjct: 1 GSSGSSGTD-SKSYNCNECGKAFTRIFHLTRH 31
Score = 28.3 bits (64), Expect = 2.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 346 ADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAG 385
+S T K++ C+ C +T L RH K H R++G
Sbjct: 1 GSSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSG 40
Score = 27.2 bits (61), Expect = 5.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 1680 HQCDTCGKSFTGNNHLKRH 1698
+ C+ CGK+FT HL RH
Sbjct: 13 YNCNECGKAFTRIFHLTRH 31
Score = 26.8 bits (60), Expect = 7.8
Identities = 9/42 (21%), Positives = 11/42 (26%), Gaps = 6/42 (14%)
Query: 313 QHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTG 354
K + C CG F H+ H HT
Sbjct: 2 SSGS-SGTDSKS-----YNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 26.4 bits (59), Expect = 9.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 975 KKFKCDVCGNGYTSVKHLKRHKIKHMKESG 1004
K + C+ CG +T + HL RH+ H ++SG
Sbjct: 11 KSYNCNECGKAFTRIFHLTRHQKIHTRKSG 40
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
binding, KIAA1227 protein, structural genomics; NMR {Homo
sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 107
Score = 46.8 bits (110), Expect = 3e-06
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 1232 KQHDDSVTYYPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVH 1291
++ Y C +C+ LSS +H + N V C C F +EH+
Sbjct: 8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEHES-K 64
Query: 1292 TGYKPYACDLCSKQFTQKSTLNIHRK 1317
YK C C + F ++ H+
Sbjct: 65 CEYKKLTCLECMRTFKSSFSIWRHQV 90
Score = 45.3 bits (106), Expect = 1e-05
Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 5/92 (5%)
Query: 1202 HVKYYHAKTLFECNICLKTFNFKTSYKRHLKQHDDSVTYYPCTVCSKNLSSPYRLKTHML 1261
K +++C +C + H + C CS SP + H
Sbjct: 7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR---NAAVCPYCSLRFFSPELKQEHE- 62
Query: 1262 IHANNRVFTCEVCGKGFIQKRYLEEH-KRVHT 1292
+ TC C + F + H VH
Sbjct: 63 SKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 42.6 bits (99), Expect = 1e-04
Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 5/93 (5%)
Query: 1756 KHKSRHIKDYNVF-CKICQLGFLSKNELDVHNIKQHDAQPHTCPVCKKIFVNKVTLAAHK 1814
+ +++ V+ C++C S E H +A CP C F + H+
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEHE 62
Query: 1815 KIHLPIDKNCQCDVCGKSFARTFHLKSHISSVH 1847
K C C ++F +F + H VH
Sbjct: 63 SKC--EYKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 41.0 bits (95), Expect = 3e-04
Identities = 18/93 (19%), Positives = 29/93 (31%), Gaps = 11/93 (11%)
Query: 1088 GERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHI 1147
+ Y C C + H R C C F + ++H
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPE----LKQEHESKCE 66
Query: 1148 LRRHIGYTVFCKECNIGFYSSTHLHSHGIKVHG 1180
++ + C EC F SS + H ++VH
Sbjct: 67 YKK-----LTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 40.3 bits (93), Expect = 7e-04
Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 1/80 (1%)
Query: 1062 GEKKICCHICGKKLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFT 1121
++ C +C KL L + C +C F + H K + T
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHESKCE-YKKLT 71
Query: 1122 CSECGQSFAARSAFSLHLKK 1141
C EC ++F + + H +
Sbjct: 72 CLECMRTFKSSFSIWRHQVE 91
Score = 39.9 bits (92), Expect = 7e-04
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 10/87 (11%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHYCGITKNNKTLLRDHISAH 895
+ + C C+ ++ + H C YC + + L ++H +
Sbjct: 15 EVYQCRLCNAKLSSLLEQGSHERLCRNAAV---------CPYCSLRFFSPELKQEH-ESK 64
Query: 896 LGIKPYCCIFCEEKYFSKKSLKRHEAK 922
K C+ C + S S+ RH+ +
Sbjct: 65 CEYKKLTCLECMRTFKSSFSIWRHQVE 91
Score = 39.1 bits (90), Expect = 0.001
Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Query: 1612 KHKSRHIKEYTVF-CKKCQLGFLSKNELNVHNIKQHDAQPHTCPVCKKIFVNKFNLTTHK 1670
+ ++ V+ C+ C S E H +A CP C F + H+
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEHE 62
Query: 1671 KLHLPMNRNHQCDTCGKSFTGNNHLKRHIYSVH 1703
+ C C ++F + + RH VH
Sbjct: 63 SKCE--YKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 38.7 bits (89), Expect = 0.002
Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 9/95 (9%)
Query: 569 SHKKRDQKIECNICGALFATKYTLQDHMNTHTGNKYKCDVCDNGYSSLKHLKRHKMKHLQ 628
S + + +C +C A ++ H N C C + S + + H+ K
Sbjct: 9 SPVENKEVYQCRLCNAKLSSLLEQGSHERLCR-NAAVCPYCSLRFFSPELKQEHESKCEY 67
Query: 629 ENGELPPSKIQKCPICHKIFIRNYMLRKHLDFVHG 663
K C C + F ++ + +H VH
Sbjct: 68 --------KKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 38.3 bits (88), Expect = 0.003
Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 29/110 (26%)
Query: 210 GEKGHICEICNRDFYSDAMLKRHLVKHSRMIKETSEEFVETGSITREEWYKMVLQRVKTC 269
++ + C +CN S H + C
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLC---------------------------RNAAVC 45
Query: 270 PLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRVH 319
P C + S + + H E + + C C + FKS + +H+ VH
Sbjct: 46 PYCSLRFFSPELKQEH--ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 38.0 bits (87), Expect = 0.004
Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 1/80 (1%)
Query: 689 GERKYCCHICGKKMRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYM 748
+ Y C +C K+ L++ C C F + H K +
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHESKCE-YKKLT 71
Query: 749 CSECGQSFAARSAFSLHLKK 768
C EC ++F + + H +
Sbjct: 72 CLECMRTFKSSFSIWRHQVE 91
Score = 38.0 bits (87), Expect = 0.004
Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 9/83 (10%)
Query: 294 RPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHT 353
+QC+ C S HER + C +C +F S +H S
Sbjct: 15 EVYQCRLCNAKLSSLLEQGSHERLCR--------NAAVCPYCSLRFFSPELKQEHE-SKC 65
Query: 354 GIKNHVCSICQSTYTTARGLKRH 376
K C C T+ ++ + RH
Sbjct: 66 EYKKLTCLECMRTFKSSFSIWRH 88
Score = 38.0 bits (87), Expect = 0.004
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Query: 1703 HLKRDTKFPCRLCSQEFDTKEQRKKHERKDHETQGLFSCDLCSYTSTQKYYLVKHKSRHI 1762
++ + CRLC+ + + ++ HER C CS +H+S+
Sbjct: 10 PVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA---AVCPYCSLRFFSPELKQEHESKC- 65
Query: 1763 KDYNVFCKICQLGFLSKNELDVHNIKQHDAQ 1793
+ + C C F S + H ++ H+
Sbjct: 66 EYKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96
Score = 38.0 bits (87), Expect = 0.004
Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Query: 1554 EEDTRNVTSDTKFPCRLCSQEFGTKKQRKKHERKDHETRGVFSCDLCSYTSTRKYYLVKH 1613
V + + CRLC+ + + ++ HER C CS +H
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA---AVCPYCSLRFFSPELKQEH 61
Query: 1614 KSRHIKEYTVFCKKCQLGFLSKNELNVHNIKQHDAQ 1649
+S+ + + C +C F S + H ++ H+
Sbjct: 62 ESKC-EYKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96
Score = 38.0 bits (87), Expect = 0.004
Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 6/93 (6%)
Query: 1646 HDAQPHTCPVCKKIFVNKFNLTTHKKLHLPMNRNHQCDTCGKSFTGNNHLKRHIYSVHLK 1705
+ + + C +C + +H++L C C F + H
Sbjct: 12 ENKEVYQCRLCNAKLSSLLEQGSHERLC---RNAAVCPYCSLRFFSPELKQEHESK---C 65
Query: 1706 RDTKFPCRLCSQEFDTKEQRKKHERKDHETQGL 1738
K C C + F + +H+ + H +
Sbjct: 66 EYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNM 98
Score = 37.6 bits (86), Expect = 0.006
Identities = 20/106 (18%), Positives = 29/106 (27%), Gaps = 31/106 (29%)
Query: 897 GIKPYCCIFCEEKYFSKKSLKRHEAKHNKVYNKAQYQDYQIQDLSMDQYRELVQSKERKC 956
+ Y C C K S HE C
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAA---------------------------VC 45
Query: 957 PKCEKEFSTPRYMRKHLRK----KFKCDVCGNGYTSVKHLKRHKIK 998
P C F +P ++H K K C C + S + RH+++
Sbjct: 46 PYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVE 91
Score = 37.6 bits (86), Expect = 0.006
Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 1/78 (1%)
Query: 415 VHGDKCYLCKICGARVKSNLKAHMRIHTGERPVCCHICGKKLRGK-LKDHMLTHTGERPF 473
V + Y C++C A++ S L+ C C + LK + +
Sbjct: 11 VENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHESKCEYKKL 70
Query: 474 GCEVCGSTYKYKYYLAVH 491
C C T+K + + H
Sbjct: 71 TCLECMRTFKSSFSIWRH 88
Score = 37.2 bits (85), Expect = 0.006
Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 9/96 (9%)
Query: 767 KKHAGFKQTIECEYCHNTFTFETGLMGVVTRDEWEILLRDKVRICPKCNKEFYSDRTMRR 826
K+ +C C+ + E L R+ +CP C+ F+S +
Sbjct: 8 ASPVENKEVYQCRLCNAKLSSLLEQ------GSHERLCRNA-AVCPYCSLRFFSPELKQE 60
Query: 827 HLKQVHIEIKTFSCEECDKIFATREKLQRHWNYIHQ 862
H + E K +C EC + F + + RH +H
Sbjct: 61 H--ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 37.2 bits (85), Expect = 0.009
Identities = 13/59 (22%), Positives = 22/59 (37%)
Query: 576 KIECNICGALFATKYTLQDHMNTHTGNKYKCDVCDNGYSSLKHLKRHKMKHLQENGELP 634
C C F + Q+H + K C C + S + RH+++ +N P
Sbjct: 42 AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAP 100
Score = 36.8 bits (84), Expect = 0.009
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 126 KCPICGDRYKSGTDMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKK 185
+C +C + S + H R ++ C C RF S + ++H + KK
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLCRNAA---VCPYCSLRFFSPELKQEHE-----SKCEYKK 69
Query: 186 FECAHCSKTYLSRVGLEDH 204
C C +T+ S + H
Sbjct: 70 LTCLECMRTFKSSFSIWRH 88
Score = 36.4 bits (83), Expect = 0.015
Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 23/103 (22%)
Query: 75 EDMYQCDICSKMFIEHHAMVKHRDWLHAIHFRSEKNLTSEEWRQLVIKNARKCPICGDRY 134
+++YQC +C+ H + + +NA CP C R+
Sbjct: 14 KEVYQCRLCNAKLSSLLEQGSH---------------------ERLCRNAAVCPYCSLRF 52
Query: 135 KSGTDMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVH 177
S + H +K C C + F S + +H+ VH
Sbjct: 53 FSPELKQEHES--KCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 35.6 bits (81), Expect = 0.022
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 3/91 (3%)
Query: 1581 RKKHERKDHETRGVFSCDLCSYTSTRKYYLVKHKSRHIKEYTVFCKKCQLGFLSKNELNV 1640
E + V+ C LC+ + H+ C C L F S
Sbjct: 3 SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQE 60
Query: 1641 HNIKQHDAQPHTCPVCKKIFVNKFNLTTHKK 1671
H K + + TC C + F + F++ H+
Sbjct: 61 HESK-CEYKKLTCLECMRTFKSSFSIWRHQV 90
Score = 35.6 bits (81), Expect = 0.024
Identities = 15/98 (15%), Positives = 26/98 (26%), Gaps = 11/98 (11%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIGYTVFCKECNIGFYSST 1169
+ + C C ++ H + C C++ F+S
Sbjct: 7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR----------NAAVCPYCSLRFFSPE 56
Query: 1170 HLHSHGIKVHGLPPFICEHCSKPFTSKGNLTVHVKYYH 1207
H K C C + F S ++ H H
Sbjct: 57 LKQEHESK-CEYKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 35.6 bits (81), Expect = 0.024
Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 3/93 (3%)
Query: 1034 VHGNKCHICKVCGAKIKGNLQQHMETHSGEKKICCHICGKKLR--GRLNEHMLTHTGERP 1091
V + + C++C AK+ L+Q C C + EH + +
Sbjct: 11 VENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHE-SKCEYKK 69
Query: 1092 YACEFCGSSFKDKSYLRIHIRKHNGERPFTCSE 1124
C C +FK + H + + + +
Sbjct: 70 LTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS 102
Score = 35.6 bits (81), Expect = 0.025
Identities = 14/87 (16%), Positives = 24/87 (27%), Gaps = 4/87 (4%)
Query: 1173 SHGIKVHGLPPFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTSYKRHLK 1232
S V + C C+ +S H + C C F + H
Sbjct: 6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES 63
Query: 1233 QHDDSVTYYPCTVCSKNLSSPYRLKTH 1259
+ + C C + S + + H
Sbjct: 64 KCEYKK--LTCLECMRTFKSSFSIWRH 88
Score = 35.6 bits (81), Expect = 0.027
Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 28/113 (24%)
Query: 180 IKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAMLKRHLVKHSRM 239
++ K+ ++C C+ S + H +C C+ F+S + + H K
Sbjct: 11 VENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCE-- 66
Query: 240 IKETSEEFVETGSITREEWYKMVLQRVKTCPLCKKTYQSAKGMRLHIREVHSK 292
+ TC C +T++S+ + H EVH++
Sbjct: 67 ------------------------YKKLTCLECMRTFKSSFSIWRHQVEVHNQ 95
Score = 34.9 bits (79), Expect = 0.052
Identities = 22/98 (22%), Positives = 28/98 (28%), Gaps = 10/98 (10%)
Query: 251 GSITREEWYKMVLQRVKTCPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRH 310
GS + + V C LC S H R + C C F S
Sbjct: 1 GSSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAA---VCPYCSLRFFSPEL 57
Query: 311 LVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADH 348
+HE K ++ C C F S I H
Sbjct: 58 KQEHES-------KCEYKKLTCLECMRTFKSSFSIWRH 88
Score = 33.7 bits (76), Expect = 0.11
Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 661 VHGNKYHSCKVCGAEIKGSLKEHMIVHTGERKYCCHICGKKMRGK-LKEHMLTHTGERPY 719
V + + C++C A++ L++ C C + LK+ + +
Sbjct: 11 VENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHESKCEYKKL 70
Query: 720 ACEICGGTFKTKWYLGVH 737
C C TFK+ + + H
Sbjct: 71 TCLECMRTFKSSFSIWRH 88
Score = 33.3 bits (75), Expect = 0.17
Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 3/91 (3%)
Query: 1725 RKKHERKDHETQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELDV 1784
E + ++ C LC+ + H+ C C L F S
Sbjct: 3 SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQE 60
Query: 1785 HNIKQHDAQPHTCPVCKKIFVNKVTLAAHKK 1815
H K + + TC C + F + ++ H+
Sbjct: 61 HESK-CEYKKLTCLECMRTFKSSFSIWRHQV 90
Score = 32.6 bits (73), Expect = 0.31
Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 10/88 (11%)
Query: 330 FECFHCGAKFISRTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRA 389
++C C AK S H VC C + + + H
Sbjct: 17 YQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESKCE-------- 66
Query: 390 DEMYKCDKCDKLFIEQSEMVQHRDWVHG 417
+ C +C + F + +H+ VH
Sbjct: 67 YKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 32.2 bits (72), Expect = 0.37
Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 11/85 (12%)
Query: 955 KCPKCEKEFSTPRYMRKHLRK---KFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPSMI 1011
+C C + S+ H R C C + S + + H+ K +
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHESKCEYK--------K 69
Query: 1012 HKCPTCYKIFTENHALKKHLDWVHG 1036
C C + F + ++ +H VH
Sbjct: 70 LTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 32.2 bits (72), Expect = 0.46
Identities = 21/119 (17%), Positives = 39/119 (32%), Gaps = 27/119 (22%)
Query: 1285 EEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKFYEFNTYVTHV 1344
+ Y C LC+ + + H +L N +C C +F F+ +
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRF--FSPELKQE 60
Query: 1345 HETHAILPRVIVTKFKVEDFQFFVCESMQSAKSTCVLCKKVFSTRENCTNHIMECHSYD 1403
HE+ + K TC+ C + F + + H +E H+ +
Sbjct: 61 HESKC-----------------------EYKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96
Score = 31.4 bits (70), Expect = 0.67
Identities = 13/80 (16%), Positives = 21/80 (26%), Gaps = 1/80 (1%)
Query: 443 GERPVCCHICGKKLRGKLKDHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYV 502
+ C +C KL L+ C C + H K +
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHESKCE-YKKLT 71
Query: 503 CNYCGHSFAARPAFNLHLKR 522
C C +F + + H
Sbjct: 72 CLECMRTFKSSFSIWRHQVE 91
Score = 30.6 bits (68), Expect = 1.6
Identities = 20/119 (16%), Positives = 34/119 (28%), Gaps = 29/119 (24%)
Query: 39 GLKPYICHICKNSYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSKMFIEHHAMVKHRD 98
+ Y C +C + H + A C CS F +H
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAA---------VCPYCSLRFFSPELKQEHE- 62
Query: 99 WLHAIHFRSEKNLTSEEWRQLVIKNARKCPICGDRYKSGTDMRRHYRDLHDSTRKCPCE 157
+ E+++L C C +KS + RH ++H+ P
Sbjct: 63 -------------SKCEYKKL------TCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS 102
Score = 29.9 bits (66), Expect = 2.3
Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 6 NKEKVRQLNVECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKR 64
+ E++ + C +C++R+ S +H S K C C ++ ++ + RH
Sbjct: 34 SHERLCRNAAVCPYCSLRFFSPELKQEH-ESKCEYKKLTCLECMRTFKSSFSIWRHQVE 91
Score = 29.1 bits (64), Expect = 4.7
Identities = 17/91 (18%), Positives = 26/91 (28%), Gaps = 9/91 (9%)
Query: 1378 TCVLCKKVFSTRENCTNHIMECHSYDV-----FEWKDKGVIKEHINPLFLKKFAFALNCP 1432
C LC S+ +H C + V + + +EH + KK C
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHESKCEYKKLT----CL 73
Query: 1433 VCKLYFDRESDFHSHMQSYHNSHSYCMKCNM 1463
C F H HN ++
Sbjct: 74 ECMRTFKSSFSIWRHQVEVHNQNNMAPTSGP 104
Score = 28.7 bits (63), Expect = 6.2
Identities = 17/88 (19%), Positives = 25/88 (28%), Gaps = 10/88 (11%)
Query: 592 LQDHMNTHTGNKYKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFIRN 651
Y+C +C+ SSL H+ CP C F
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC---------RNAAVCPYCSLRFFSP 55
Query: 652 YMLRKHLDFVHGNKYHSCKVCGAEIKGS 679
+ ++H K +C C K S
Sbjct: 56 ELKQEHESKCEYKKL-TCLECMRTFKSS 82
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 51.0 bits (121), Expect = 5e-06
Identities = 73/593 (12%), Positives = 163/593 (27%), Gaps = 199/593 (33%)
Query: 1272 EVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHR-KLHLNIKDFICDL- 1329
E + + Y+E+ R++ + + + N+ R + +L ++ + +L
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVF------------AKYNVSRLQPYLKLRQALLELR 148
Query: 1330 ------------CG--------------AKFYEFNTY---VTHVHETHAILPRVIVTKFK 1360
G +F + + + + +L + ++
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208
Query: 1361 VEDFQFFVCESMQSAKSTCVLCKKVFSTRENCTNHIMECHSY--------DVFEWKDKGV 1412
++ + + K + +++ Y +V +
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELR-------RLLKSKPYENCLLVLLNV--Q-NAKA 258
Query: 1413 IKEHINPLFLKKFAFALNCPVCKLYFDRESDFHSHMQSYHNSHSYCMKCNMYIFNSRLQL 1472
AF L+C + L R + + +H L
Sbjct: 259 WN-----------AFNLSCKI--LLTTRFKQVTDFLSAATTTHI------------SLDH 293
Query: 1473 HKRKHTREE-----EQWTKVNIEYSCDCCEMSWSNPKDFGQHLNLVKCSYCANAAFCSSK 1527
H T +E ++ ++ E+ +NP + L+++ A
Sbjct: 294 HSMTLTPDEVKSLLLKY--LDCRPQDLPREVLTTNP----RRLSII-------AESIRDG 340
Query: 1528 ALT----RHLVEEHSDKLCGEDEES-DELDDEEDTRNVTS------DTKFP----CRLCS 1572
T +H+ + DKL E S + L+ E + P +
Sbjct: 341 LATWDNWKHV---NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397
Query: 1573 QEFGTKKQRKKHERKDHETRGVFSCDLCSYTSTRKYYLVKHKSRHIKEYTVFCKKCQLGF 1632
V L Y+ LV+ + KE T+ L
Sbjct: 398 D-------------VIKSDVMVVVNKLHKYS------LVE---KQPKESTISIPSIYLEL 435
Query: 1633 LSKNELNVHNIKQHDAQPHTCPVCKKIFVNKFNLTTHKKLHLPMNRNHQCDTCGKSFTGN 1692
K E ++ H + V+ +N+ + D +
Sbjct: 436 KVKLE--------NEYALH------RSIVDHYNIP----------KTFDSDDLIPPYLDQ 471
Query: 1693 ---NHLKRHIYSV-HLKRDTKFPCRLCSQEFDTKEQRKKHERKDHETQG----LFSCDLC 1744
+H+ H+ ++ H +R T F +F EQ+ +H+ G L
Sbjct: 472 YFYSHIGHHLKNIEHPERMTLFRMVF--LDFRFLEQKIRHDSTAWNASGSILNTLQ-QLK 528
Query: 1745 SYTSTQKYYLVKHK---SRHIKDYNVF-------------CKICQLGFLSKNE 1781
Y K Y+ + R + F + ++ ++++E
Sbjct: 529 FY----KPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDE 577
Score = 48.7 bits (115), Expect = 2e-05
Identities = 83/605 (13%), Positives = 159/605 (26%), Gaps = 182/605 (30%)
Query: 1091 PYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRR 1150
P E S + Y+ R +N + F + +R L L++ LR
Sbjct: 97 PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA-----KYNVSRLQPYLKLRQALLE--LRP 149
Query: 1151 HIGYTVF----C-KECNIGFYSSTHLHSHGIKVHGLPPF-I----CEHCSKP---FTSKG 1197
+ K ++ KV F I ++C+ P
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSY------KVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203
Query: 1198 NLTVHV-KYYHAKTLFECNICLKTFNFKTSYKRHLKQH---------DDSVTYYPCTVCS 1247
L + + +++ NI L+ + + +R LK + V +
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN--------VQN 255
Query: 1248 KNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFT 1307
+ + L +L+ + T + L+ H S T
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVT-DFLSAATTTHISLDHH---------------SMTLT 299
Query: 1308 QKSTLNIHRKLHLNIKDFICDLCGAKFYEFNTYVTHVHETHAILPRVIVTKFKVEDFQFF 1367
++ K L+ + DL E PR +
Sbjct: 300 PDEVKSLLLKY-LDCRPQ--DL--------------PREVLTTNPRRLSI---------- 332
Query: 1368 VCESMQSAKSTC-----VLCKKVFSTRENCTNHIMECHSYDVFEWKDKGVIKEHIN-PLF 1421
+ ES++ +T V C K+ + E+ N + +F+ V + P
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD--RLSVFPPSAHIPTI 390
Query: 1422 LKKFAFALNCPVCKLYFDRESDFHSHMQSYHNSHSYCM----KCNMYIFNSRLQLHKRKH 1477
L + ++FD M + H Y + I + L +
Sbjct: 391 L----------LSLIWFDVIKS--DVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK 438
Query: 1478 TREEEQWTKVNIE-YSCDCCEMSWSNPKD-----FGQHLNLVKCSYCANAAFCSSKALTR 1531
E + ++ Y+ S F H+ +
Sbjct: 439 LENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI-----GH-------------- 479
Query: 1532 HLVEEHSDKLCGEDEESDELDDEEDTRNVTSDTKFPCRLCSQEFGTKKQRK-KHERKDHE 1590
HL K E R V D +F ++K +H+
Sbjct: 480 HL------KNIEHPERMTLF------RMVFLDFRF------------LEQKIRHDSTAWN 515
Query: 1591 TRGVFSCDLCSYTSTRKY--YLVKHK---SRHIKEYTVFCKKC-------------QLGF 1632
G L + Y Y+ + R + F K ++
Sbjct: 516 ASGSILNTL---QQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIAL 572
Query: 1633 LSKNE 1637
++++E
Sbjct: 573 MAEDE 577
Score = 48.3 bits (114), Expect = 3e-05
Identities = 42/342 (12%), Positives = 84/342 (24%), Gaps = 84/342 (24%)
Query: 794 VVTRD----EWEILLRDKVRICPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECD----- 844
+ TR ++ + D LK + + E
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRR 329
Query: 845 -KIFAT--REKLQRHWNY------------IHQGIRNTGPNQLLEC-HYCGITKNNKTLL 888
I A R+ L W+ I + P + + +
Sbjct: 330 LSIIAESIRDGLAT-WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV-------F 381
Query: 889 RD--HISAHL------GIKPYCCIFCEEKYFSKKSLKRHEAKHNKVYNKAQYQDYQIQDL 940
HI L + + K K SL + K + + + Y + +++
Sbjct: 382 PPSAHIPTILLSLIWFDVIKSDVMVVVNK-LHKYSLVEKQPKESTISIPSIYLELKVKLE 440
Query: 941 SMDQ-YRELVQSKERKCPKCEKEFSTPR---YMRKHLRKKFKCDVCGNGYTSVKHLKRHK 996
+ +R +V + P Y H+ G+ HLK
Sbjct: 441 NEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI-----------GH----HLK--N 483
Query: 997 IKHMKESGELPPSMIHKCPTCYKIFTENHALKKHLDWVHGNKCHICKVCGAKIK-GNLQQ 1055
I+H + +F + ++ H A N Q
Sbjct: 484 IEHPERMTLFR-----------MVFLD-------FRFLEQKIRHDSTAWNASGSILNTLQ 525
Query: 1056 HMETHSGEKKICCHICGKKLRGRLNEHMLTHTGERPYACEFC 1097
++ + + IC + + L E ++
Sbjct: 526 QLKFY--KPYICDNDPKYERLVNAILDFLPKIEENLICSKYT 565
Score = 41.8 bits (97), Expect = 0.003
Identities = 86/658 (13%), Positives = 180/658 (27%), Gaps = 172/658 (26%)
Query: 1336 EFNTYVTHVHETHAILPRVIVTKFKVEDFQFFVCESMQSAKSTCVLCKKVFSTRENCTNH 1395
+F T ++ IL V F V++F + M K + S E +H
Sbjct: 8 DFETGEHQ-YQYKDILS-VFEDAF-VDNFDCKDVQDMP---------KSILSKEE--IDH 53
Query: 1396 IMECHS--------YDVFEWKDKGVIKEHINPLFLKKFAFALNCPVCKLYFDRESD---F 1444
I+ + K + ++++ + + + F L P+ +
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF-LMSPIKTEQRQPSMMTRMY 112
Query: 1445 HSHMQSYHNSHSYCMKCNMYIFNSRLQLHK--RKHTREEEQWTKVNIE------------ 1490
+N + K N+ SRLQ + R+ E V I+
Sbjct: 113 IEQRDRLYNDNQVFAKYNV----SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVAL 168
Query: 1491 -----YSCDCC---EMSWSN------PKDFGQHLN----LVKCSYCANAAFCSSKALTRH 1532
Y C ++ W N P+ + L + ++ + + S+ L H
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 1533 LVEEHSDKLCGEDEESDEL---DDEEDTRNVTS-DTKFPCR-LCSQEFGTKKQRKKHERK 1587
++ +L + L + ++ + + + C+ L +
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN--LSCKILLT--------------- 271
Query: 1588 DHETRGVFSCDLCSYTSTRKYYLVKHKSRHIKEYTVFCKKCQLGFLSKNELNVHNIKQHD 1647
TR D S +T L H + L K + + D
Sbjct: 272 ---TRFKQVTDFLSAATTTHISLDHHSMTLTPDEV-------KSLLLK----YLDCRPQD 317
Query: 1648 AQPHTC---PVCKKIFVNKFNLTTHKKLHLPMNR-----NHQCDTCGKSFTGN-NHLK-- 1696
P I + + + + CD + N L+
Sbjct: 318 LPREVLTTNPRRLSIIA--------ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369
Query: 1697 --RHIY---SVHLKRDTKFP----CRL-------CSQEFDTKEQRKK--HERKDHETQGL 1738
R ++ SV P + K + ++ T +
Sbjct: 370 EYRKMFDRLSV-FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI 428
Query: 1739 FSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELD-------VHNIKQHD 1791
S L + H+ + YN+ LD H++K +
Sbjct: 429 PSIYL-ELKVKLENEYALHR-SIVDHYNIPKTFDSDDL-IPPYLDQYFYSHIGHHLKNIE 485
Query: 1792 AQPHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHISSVHLKRE 1851
P + + +F++ L K H N + + + K +I K E
Sbjct: 486 -HPERMTLFRMVFLDFRFLEQ-KIRHDSTAWNASGSIL-NTLQQLKFYKPYICDNDPKYE 542
Query: 1852 QRKKHERKDHETQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNE 1909
+ + + + L+ K + + ++ ++++E
Sbjct: 543 RLVN--------------AILDFLPKIEENLICSK---------YTDLLRIALMAEDE 577
Score = 40.2 bits (93), Expect = 0.009
Identities = 86/706 (12%), Positives = 183/706 (25%), Gaps = 255/706 (36%)
Query: 171 QHRKVVHMGIKQ-KKKFECAHCSKTYLSRVGLEDHINN--HTGEKGHICEICNRDFYSDA 227
Q++ ++ + F+C ++D + E HI + +
Sbjct: 17 QYKDILSVFEDAFVDNFDCKD----------VQDMPKSILSKEEIDHIIMSKDAVSGTLR 66
Query: 228 MLKRHLVKHSRMIKETSEEFVETGSITREEWYKMVLQRVKTCP-LCKKTYQSAKGMRLH- 285
+ L K M+++ FVE ++ ++ + P + + Y + RL+
Sbjct: 67 LFWTLLSKQEEMVQK----FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD-RLYN 121
Query: 286 ------------------IREVHSKVRPHQC------KGCGK------YFKSQRHLVQHE 315
+R+ ++RP + G GK S + + +
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMD 181
Query: 316 RRVH---LGVKKIKHSNFE-----CFHCGAKFISRTHIADHMTSHTGIKNHVCSICQSTY 367
++ L + E + + SR +DH +I +
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR---SDHS----------SNIKLRIH 228
Query: 368 TTARGLKR--HNKNHLREAGVLRADEMYKCDKCDKLFIEQSEMVQHRDWVHGDKCYLCKI 425
+ L+R +K + VL + + + + + CKI
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLL-------NVQNA------KAWNAFN-LS------CKI 268
Query: 426 -CGARVKSNLKAHMRIHTGERPVCCH-----------ICGKKLRGKLKDHMLTHTGERPF 473
R K T + H + K L + +D L
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD--LPR------ 320
Query: 474 GCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHTERGD-VRHI 532
EV + P + A ++ D +H+
Sbjct: 321 --EVLT----------TN--------PRRLS----IIAES------IRDGLATWDNWKHV 350
Query: 533 ECQHSLKIIE-----------YKIYQWISI--EN-----------WFKIKRENVPSTKDQ 568
C IIE K++ +S+ + WF + + +V ++
Sbjct: 351 NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK 410
Query: 569 SHKK----RDQKIECNICGALFATKYTLQDHMNTHTGNKYKCDVCDNGYSSLKHLKRHKM 624
HK + K + T+ +
Sbjct: 411 LHKYSLVEKQPK------------ESTISIP----------------------SIYLELK 436
Query: 625 KHLQENGELPPSKIQKCPICHKIFIRNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHM 684
L+ L H+ + +Y + K D + + H
Sbjct: 437 VKLENEYAL-----------HRSIVDHYNIPKTFDSDDLIPPY--------LDQYFYSH- 476
Query: 685 IVHTGERKYCCHICGKKMRGKLK------------EHMLTHTGERPYACEICGGTFKT-- 730
I H H+ + ++ E + H A G T
Sbjct: 477 IGH--------HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDS---TAWNASGSILNTLQ 525
Query: 731 --KWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQ 774
K+Y ++ ++ + + + F + +L K+ +
Sbjct: 526 QLKFYKP-YICDNDPKYERLVNAILD-FLPKIEENLICSKYTDLLR 569
Score = 37.9 bits (87), Expect = 0.040
Identities = 78/658 (11%), Positives = 160/658 (24%), Gaps = 211/658 (32%)
Query: 782 HNTFTFETGLMGVVTRDEWEILLRDKVRICPKCNKEFYSD---RTMRRHLKQVHIEIKTF 838
H+ FETG +D + F + + ++ K +
Sbjct: 4 HHHMDFETGEHQYQYKDILSVFEDA-----------FVDNFDCKDVQDMPKSI------L 46
Query: 839 SCEECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHYCGITKNNKTLLRDHISAH--- 895
S EE D I +++ + + ++++ + + N L I
Sbjct: 47 SKEEIDHIIMSKDAVSGTLRLF--WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ 104
Query: 896 --LGIKPYCCIFCEEKY------FSKKSLKRHEAKHNKVYNKAQ---------------- 931
+ + Y I ++ F+K ++ R + + K+
Sbjct: 105 PSMMTRMY--IEQRDRLYNDNQVFAKYNVSRLQ-PYLKLRQALLELRPAKNVLIDGVLGS 161
Query: 932 ---------YQDYQIQD--------LSMDQYRE-----------LVQSKERKCPKCEKEF 963
Y++Q L++ L Q + +
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS 221
Query: 964 STPR---YMRKHLRKKFK------C-----DVCGNGYTSVKHLK------------RHK- 996
+ ++ LR+ K C +V + K R K
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ-----NAKAWNAFNLSCKILLTTRFKQ 276
Query: 997 -IKHMKESGELPPSMIHKCPTCYKIFTENHALKKHLDWVHGN---------KCH--ICKV 1044
+ + S+ H T T + L ++ + +
Sbjct: 277 VTDFLSAATTTHISLDHHSMT----LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI 332
Query: 1045 CGAKIKGNLQQHMETHSGEKKICCHICGKKLRGRLNEHMLTHTGERPYACEFCGSSFKDK 1104
I+ + T K + C + LN L R F
Sbjct: 333 IAESIR----DGLATWDNWKHVNCDKLTTIIESSLNV--LEPAEYRKM--------FDRL 378
Query: 1105 SYLR--IHIRKH------NGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIGYTV 1156
S HI S ++K + Y
Sbjct: 379 SVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL----VEKQPKESTISIPSIYLE 434
Query: 1157 FCKECNIGFYSSTHLHSHGIKVHGLP-PFICEHCSKPFTSKGNLTVHVKY------YHAK 1209
+ + LH + + +P F + P+ +Y +H
Sbjct: 435 LKVKLE----NEYALHRSIVDHYNIPKTFDSDDLIPPYLD--------QYFYSHIGHH-- 480
Query: 1210 TLFECNICLKTFNFKTSYK--RHLKQ---HDDSVTYYPCTVCSKNLSSPYRLKTHMLIHA 1264
L + F+ + R L+Q HD L++ +LK +
Sbjct: 481 -LKNIEHPERMTLFRMVFLDFRFLEQKIRHDS----TAWNASGSILNTLQQLKFY----- 530
Query: 1265 NNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNI 1322
K Y+ ++ Y+ + F K N+ + ++
Sbjct: 531 ----------------KPYICDN---DPKYERLVNAI--LDFLPKIEENLICSKYTDL 567
Score = 34.4 bits (78), Expect = 0.52
Identities = 87/712 (12%), Positives = 195/712 (27%), Gaps = 188/712 (26%)
Query: 204 HINNHTGEKGHICEICNRDF---YSDAMLKRHLVKH-SRMIKE--TSEEFVE-TGSITRE 256
H++ TGE + +D + DA + K M K + EE S
Sbjct: 6 HMDFETGEHQY----QYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61
Query: 257 EWYKMVLQRVKTCPLCKKTYQSA--KGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQH 314
+ + + ++ Q + +R++ + + S ++ + + ++ ++ Q
Sbjct: 62 SGTLRLFWTLLSKQ--EEMVQKFVEEVLRINYKFLMSPIK-TEQRQ--PSMMTRMYIEQR 116
Query: 315 ERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTSHTGIKNHVCSICQSTYTTARGLK 374
+R + K+ +SR + ++ + + + G+
Sbjct: 117 DRLYNDNQVFAKY-----------NVSRLQ------PYLKLRQALLELRPAKNVLIDGVL 159
Query: 375 RHNKNHLREAGVLRADEMYKCDKCDKLFIEQSEMVQHRDWVHGDKCY--------LCKIC 426
K + V +C K+F W++ C L K+
Sbjct: 160 GSGKTWV-ALDVCL-SYKVQCKMDFKIF-----------WLNLKNCNSPETVLEMLQKLL 206
Query: 427 GARVKSNLKAHMRIHTGERPVCCHICGKKLRGKLKDHMLTH---------TGE--RPF-- 473
++ N + H+ + H +LR LK + + F
Sbjct: 207 -YQIDPNWTSRSD-HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264
Query: 474 GCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKR-HTERGDVRHI 532
C++ +T ++K T + +L LK D+
Sbjct: 265 SCKILLTT-RFKQVTDFLSAATTTHISLDHHSMT--LTPDEVKSLLLKYLDCRPQDLPRE 321
Query: 533 ECQHS---LKIIEYKIYQWIS-IENWFKIKRENVPSTKDQS--------HKKR------- 573
+ L II I ++ +NW + + + + + S ++K
Sbjct: 322 VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF 381
Query: 574 --DQKIECNICGALFA--TKYTLQDHMNT-HTGNKYKCDVCDNGYSSLKHLKRHKMKHLQ 628
I + ++ K + +N H + + ++ S + + L+
Sbjct: 382 PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS-IPSIYLELKVKLE 440
Query: 629 ENGELPPSKIQKCPICHKIFIRNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIVHT 688
L H+ + +Y +
Sbjct: 441 NEYAL-----------HRSIVDHYNIP--------------------------------- 456
Query: 689 GERKYCCHICGKKMRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGVHMRK-HNGERPY 747
+ + Y ++G H++ + ER
Sbjct: 457 --KTFDSDDLIPPY-------------LDQYFY----------SHIGHHLKNIEHPERMT 491
Query: 748 MCSECGQSFAARSAFSLHLK-KHAGFKQTIECEYCHNTFTFETGLMGVVTRDE--WEILL 804
+ F F L K +H NT + ++ +E L+
Sbjct: 492 LFRMVFLDF----RF-LEQKIRHDSTAWN-ASGSILNTLQQLKFYKPYICDNDPKYERLV 545
Query: 805 RDKVRICPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECDKIFATREK-LQR 855
+ PK + ++ + I + E + IF K +QR
Sbjct: 546 NAILDFLPKIEENLICS----KYTDLLRIALMA----EDEAIFEEAHKQVQR 589
Score = 32.5 bits (73), Expect = 1.9
Identities = 58/424 (13%), Positives = 107/424 (25%), Gaps = 126/424 (29%)
Query: 23 RYSSKSQLLDHLNS-HTGLKPYICHICKNSY------VAAKGLKRHLKRHMQATGQLSVE 75
+S +L+ L + P +S + + R L + L V
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL 250
Query: 76 DMYQCDICSKMFIEH-----HAMVKHRDW--------LHAIHFRSE---KNLTSEEWRQL 119
++ + ++ R H + LT +E + L
Sbjct: 251 L----NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306
Query: 120 VIK----------------NARKCPICG----------DRYK------------------ 135
++K N R+ I D +K
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366
Query: 136 SGTDMRRHYRDL------------------HDSTRKCPCEV---CGKRFNSIKRVKQHRK 174
+ R+ + L D + V K K+ K+
Sbjct: 367 EPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI 426
Query: 175 VVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAMLKRHLV 234
+ I + K + + + L R + DH N D Y + + HL
Sbjct: 427 SIP-SIYLELKVKLEN--EYALHRS-IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLK 482
Query: 235 KHSRMIKETSEEFVETGSITREEWY---KMVLQRVKTCPLCKKTYQSAKGMRLHIREVHS 291
E E + + + Q+++ T +A G L+ +
Sbjct: 483 N-----IEHPERMTLF-----RMVFLDFRFLEQKIRH----DSTAWNASGSILNTLQQLK 528
Query: 292 KVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTS 351
+P+ C KY ER V+ + + K+ IA M
Sbjct: 529 FYKPYICDNDPKY----------ERLVNAILDFLPKIEENLICS--KYTDLLRIA-LMAE 575
Query: 352 HTGI 355
I
Sbjct: 576 DEAI 579
Score = 31.7 bits (71), Expect = 3.5
Identities = 19/123 (15%), Positives = 38/123 (30%), Gaps = 39/123 (31%)
Query: 3 LNLN--KEKVRQLNVECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKR 60
L+ ++K+R H + +++ +L+ L LK Y +IC N
Sbjct: 498 LDFRFLEQKIR-------HDSTAWNASGSILNTLQQ---LKFYKPYICDND--------- 538
Query: 61 HLKRHMQATGQLSVEDMYQCDICSKMFIEHHAMV----KHRDWLHAIHFRSEKNLTSEEW 116
+ I F+ K+ D L ++ + E
Sbjct: 539 ------------PKYERLVNAI--LDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAH 584
Query: 117 RQL 119
+Q+
Sbjct: 585 KQV 587
Score = 31.0 bits (69), Expect = 5.0
Identities = 42/277 (15%), Positives = 81/277 (29%), Gaps = 64/277 (23%)
Query: 1677 NRNHQCDTCGKSFTGNNHLK-RHIYSVHL---KRDTKFPCRLCSQE----FDTKEQRKKH 1728
+ +H D TG + + + I SV + F C+ +E
Sbjct: 2 HHHHHMDF----ETGEHQYQYKDILSVFEDAFVDN--FDCKDVQDMPKSILSKEEIDHII 55
Query: 1729 ERKDHETQG--LFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELDVHN 1786
KD + LF L S V+ R +Y + + +
Sbjct: 56 MSKDAVSGTLRLFWT-LLSKQEEMVQKFVEEVLR--INYKFLMSPIKTEQRQPSMMTRMY 112
Query: 1787 IKQHDAQPHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQCDV-------CGKSF-----A 1834
I+Q D + V K V+++ + L + + +V GK++
Sbjct: 113 IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK-NVLIDGVLGSGKTWVALDVC 171
Query: 1835 RTFHLKSHIS-SVH-LKREQRKKHERKDHETQGLFS------CDLCSYTSTQKY------ 1880
++ ++ + + L + E Q L ++S K
Sbjct: 172 LSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ 231
Query: 1881 ----YLVKHK--------------SRHIKDYNVFCKI 1899
L+K K ++ +N+ CKI
Sbjct: 232 AELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKI 268
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
transcription factor, DNA binding protein; NMR {Mus
musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Length = 37
Score = 43.9 bits (104), Expect = 5e-06
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNI 1322
R TG KP+ C C + F++ L +HRK H+ +
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37
Score = 40.8 bits (96), Expect = 6e-05
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRH 523
R TG +P+ C C SF+ LH KRH
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 40.0 bits (94), Expect = 1e-04
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHIL 1148
R G +PF C +C +SF +RS HL H H+L
Sbjct: 2 STRGSTGIKPFQCPDCDRSF-SRSD---HLALHRKRHML 36
Score = 39.6 bits (93), Expect = 2e-04
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKH 1114
TG +P+ C C SF +L +H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 39.2 bits (92), Expect = 2e-04
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 737 HMRKHNGERPYMCSECGQSFAARSAFSLHLKKH 769
R G +P+ C +C +SF+ +LH K+H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 37.7 bits (88), Expect = 9e-04
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKH 741
TG +P+ C C +F +L +H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 37.7 bits (88), Expect = 0.001
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKH 495
TG +PF C C ++ +LA+H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 33.8 bits (78), Expect = 0.018
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRHM 66
TG+KP+ C C S+ + L H KRHM
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 32.3 bits (74), Expect = 0.064
Identities = 9/33 (27%), Positives = 11/33 (33%), Gaps = 2/33 (6%)
Query: 437 HMRIHTGERPVCCHICGKKL--RGKLKDHMLTH 467
R TG +P C C + L H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 31.2 bits (71), Expect = 0.19
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHL 627
TG K ++C CD +S HL H+ +H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 30.0 bits (68), Expect = 0.45
Identities = 8/33 (24%), Positives = 11/33 (33%), Gaps = 2/33 (6%)
Query: 683 HMIVHTGERKYCCHICGKK-MRG-KLKEHMLTH 713
TG + + C C + R L H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 29.2 bits (66), Expect = 0.87
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHERR 317
+ ++P QC C + F HL H +R
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKR 33
Score = 28.8 bits (65), Expect = 1.4
Identities = 10/36 (27%), Positives = 13/36 (36%)
Query: 204 HINNHTGEKGHICEICNRDFYSDAMLKRHLVKHSRM 239
TG K C C+R F L H +H +
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37
Score = 28.5 bits (64), Expect = 1.7
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 1259 HMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVH 1291
+ F C C + F + +L H++ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 28.1 bits (63), Expect = 2.2
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 348 HMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHL 381
TGIK C C +++ + L H K H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 27.3 bits (61), Expect = 3.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 1821 DKNCQCDVCGKSFARTFHLKSHI 1843
K QC C +SF+R+ HL H
Sbjct: 9 IKPFQCPDCDRSFSRSDHLALHR 31
Score = 26.5 bits (59), Expect = 8.3
Identities = 7/33 (21%), Positives = 9/33 (27%), Gaps = 2/33 (6%)
Query: 1056 HMETHSGEKKICCHICGKKL--RGRLNEHMLTH 1086
+G K C C + L H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 43.7 bits (103), Expect = 8e-06
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERP 1119
+ GE P+ C C F ++YL H R H +
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 42.2 bits (99), Expect = 3e-05
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 463 HMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERP 500
+ GE PF C C + + YL H R H +
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 40.2 bits (94), Expect = 1e-04
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERP 746
+ GE P+ C C F + YL H R H +
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 39.8 bits (93), Expect = 2e-04
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1287 HKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
G P+ C C + FTQ++ L H + H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 39.5 bits (92), Expect = 2e-04
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 735 GVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAG 771
G GE P+ CS+C + F R+ H + HA
Sbjct: 1 GSSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 37.5 bits (87), Expect = 0.001
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1110 HIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAG 1144
GE PF CS+C + F R+ H + HA
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 37.1 bits (86), Expect = 0.002
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 1258 THMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHTGYKP 1296
+ A F C C + F Q+ YL +H+R H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 34.1 bits (78), Expect = 0.020
Identities = 9/34 (26%), Positives = 12/34 (35%)
Query: 491 HMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHT 524
GE P+ C+ C F R H + H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA 36
Score = 31.8 bits (72), Expect = 0.12
Identities = 9/39 (23%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 595 HMNTHTGNK-YKCDVCDNGYSSLKHLKRHKMKHLQENGE 632
++ G +KC CD ++ +L +H+ H +++G
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 31.4 bits (71), Expect = 0.17
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHERRVHLG 321
+ P +C C + F + +LVQHE R H
Sbjct: 7 GAGENPFKCSKCDRVFTQRNYLVQHE-RTHAR 37
Score = 29.1 bits (65), Expect = 1.3
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 683 HMIVHTGERKYCCHICGK--KMRGKLKEHMLTHTGERP 718
GE + C C + R L +H TH +
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 28.7 bits (64), Expect = 1.7
Identities = 9/39 (23%), Positives = 13/39 (33%), Gaps = 2/39 (5%)
Query: 436 AHMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERP 472
+ GE P C C + + L H TH +
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 28.3 bits (63), Expect = 2.0
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 33 HLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+S G P+ C C + L +H + H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 28.3 bits (63), Expect = 2.3
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 183 KKKFECAHCSKTYLSRVGLEDHINNHTGEKGH 214
+ F+C+ C + + R L H H + G
Sbjct: 10 ENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 27.9 bits (62), Expect = 2.8
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 1173 SHGIKVHGLPPFICEHCSKPFTSKGNLTVH 1202
S G G PF C C + FT + L H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQH 31
Score = 27.9 bits (62), Expect = 3.3
Identities = 9/20 (45%), Positives = 16/20 (80%)
Query: 393 YKCDKCDKLFIEQSEMVQHR 412
+KC KCD++F +++ +VQH
Sbjct: 13 FKCSKCDRVFTQRNYLVQHE 32
Score = 27.5 bits (61), Expect = 4.0
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 348 HMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAG 385
+S G CS C +T L +H + H R++G
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Length = 129
Score = 44.9 bits (105), Expect = 2e-05
Identities = 21/117 (17%), Positives = 32/117 (27%), Gaps = 2/117 (1%)
Query: 1026 ALKKHLDWVHGNKCHICKVCGAKIKGNLQQHMETHSGEKKICCHICGKKLRGRLNEHMLT 1085
KK+L G H+ + + K H +L
Sbjct: 9 GSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLA 68
Query: 1086 HTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKH 1142
+ C C F L+ HIR E C C + F + + H+ K
Sbjct: 69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKK 123
Score = 42.2 bits (98), Expect = 2e-04
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKK 768
+L + C +C F + L H+R E +C C + F + + H+ K
Sbjct: 65 RLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCK 122
Query: 769 H 769
Sbjct: 123 K 123
Score = 40.3 bits (93), Expect = 8e-04
Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 3/98 (3%)
Query: 1750 QKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELDVHNIKQHDAQPHTCPVCKKIFVNKVT 1809
++Y+ + + + + V I L ++ + CP+C F + V+
Sbjct: 30 KRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVS 89
Query: 1810 LAAHKKIHLPIDKNCQCDVCGKSFARTFHLKSHISSVH 1847
L H + + C VC K F T H+ H
Sbjct: 90 LKQHIRYT---EHTKVCPVCKKEFTSTDSALDHVCKKH 124
Score = 40.3 bits (93), Expect = 8e-04
Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 18/131 (13%)
Query: 198 RVGLEDHINNHTGEKGHICEICNRDFYSDAMLKRHLVKH--SRMIKETSEEFVETGSITR 255
G + +++NH G H+ + + + H + R+I+ + + +
Sbjct: 7 DSGSKKYLSNHKGIFIHVT--------LEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLD 58
Query: 256 EEWYKMVLQRVK-----TCPLCKKTYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRH 310
E Y L K CPLC + S+ ++ HIR C C K F S
Sbjct: 59 ESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE---HTKVCPVCKKEFTSTDS 115
Query: 311 LVQHERRVHLG 321
+ H + H
Sbjct: 116 ALDHVCKKHNI 126
Score = 39.9 bits (92), Expect = 0.001
Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 462 DHMLTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLK 521
+L F C +C + L H+R E VC C F + + H+
Sbjct: 64 YRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVC 121
Query: 522 RH 523
+
Sbjct: 122 KK 123
Score = 39.9 bits (92), Expect = 0.001
Identities = 19/109 (17%), Positives = 32/109 (29%), Gaps = 4/109 (3%)
Query: 1595 FSCDLCSYTSTRKYYLVKHKSRHIKEYTVFCKKCQLGFLSKNELNVHNIKQHDAQPHTCP 1654
+ R + L + R I+ V L ++ + CP
Sbjct: 20 IFIHVTLEELKRYHQLTPEQKRLIRA-IVKTLIHNPQLLDESSYLYRLLASKAISQFVCP 78
Query: 1655 VCKKIFVNKFNLTTHKKLHLPMNRNHQCDTCGKSFTGNNHLKRHIYSVH 1703
+C F + +L H + C C K FT + H+ H
Sbjct: 79 LCLMPFSSSVSLKQHIRYT---EHTKVCPVCKKEFTSTDSALDHVCKKH 124
Score = 39.5 bits (91), Expect = 0.002
Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 2/98 (2%)
Query: 1138 HLKKHAGSHILRRHIGYTVFCKECNIGFYSSTHLHSHGIKVHGLPPFICEHCSKPFTSKG 1197
+ H + +R I V N + + + F+C C PF+S
Sbjct: 29 LKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSV 88
Query: 1198 NLTVHVKYYHAKTLFECNICLKTFNFKTSYKRHLKQHD 1235
+L H++Y C +C K F S H+ +
Sbjct: 89 SLKQHIRYTEHT--KVCPVCKKEFTSTDSALDHVCKKH 124
Score = 39.5 bits (91), Expect = 0.002
Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 9/98 (9%)
Query: 6 NKEKVRQLNVECHHCAMRYSSKSQLLDHLNSHTGLKPYICHICKNSYVAAKGLKRHLKRH 65
++++ + V+ + +S L L + + ++C +C + ++ LK+H++
Sbjct: 38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT 97
Query: 66 MQATGQLSVEDMYQCDICSKMFIEHHAMVKHRDWLHAI 103
E C +C K F + + H H I
Sbjct: 98 ---------EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 38.8 bits (89), Expect = 0.003
Identities = 22/126 (17%), Positives = 42/126 (33%), Gaps = 3/126 (2%)
Query: 111 LTSEEWRQLVIKNARKCPICGDRYKSGTDMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVK 170
+T + K + +++R+++ + R V N +
Sbjct: 1 MTESDVDSGSKKYLSNHKGIFIHV-TLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDE 59
Query: 171 QHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAMLK 230
+ K +F C C + S V L+ HI K +C +C ++F S
Sbjct: 60 SSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK--VCPVCKKEFTSTDSAL 117
Query: 231 RHLVKH 236
H+ K
Sbjct: 118 DHVCKK 123
Score = 37.6 bits (86), Expect = 0.009
Identities = 23/139 (16%), Positives = 44/139 (31%), Gaps = 20/139 (14%)
Query: 1047 AKIKGNLQQHMETHSGEKKICCHICGKKLRGRLNEHMLTHTGERPYAC----EFCGSSFK 1102
+ + ++++ H G I H+ ++L H LT +R
Sbjct: 4 SDVDSGSKKYLSNHKG---IFIHVTLEEL---KRYHQLTPEQKRLIRAIVKTLIHNPQLL 57
Query: 1103 DKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKHAGSHILRRHIGYTVFCKECN 1162
D+S + F C C F++ + H++ + + C C
Sbjct: 58 DESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKV----------CPVCK 107
Query: 1163 IGFYSSTHLHSHGIKVHGL 1181
F S+ H K H +
Sbjct: 108 KEFTSTDSALDHVCKKHNI 126
Score = 37.2 bits (85), Expect = 0.012
Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 13/123 (10%)
Query: 674 AEIKGSLKEHMIVHTGERKYCCHICGKKMRGKLKEHMLTHTGERPYAC----EICGGTFK 729
+++ K+++ H G H+ +++ + H LT +R I
Sbjct: 4 SDVDSGSKKYLSNHKG---IFIHVTLEEL---KRYHQLTPEQKRLIRAIVKTLIHNPQLL 57
Query: 730 TKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFTFET 789
+ + ++C C F++ + H++ K C C FT
Sbjct: 58 DESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK---VCPVCKKEFTSTD 114
Query: 790 GLM 792
+
Sbjct: 115 SAL 117
Score = 36.5 bits (83), Expect = 0.021
Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 8/120 (6%)
Query: 885 KTLLRDHISAHLGIKPYCCIFCEEKYFSKKSLKRHEAKHNKVYNKAQYQDYQIQDLS--M 942
+ + ++S H GI E+ L + + + K + Q+ D S +
Sbjct: 7 DSGSKKYLSNHKGIF---IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYL 63
Query: 943 DQYRELVQSKERKCPKCEKEFSTPRYMRKHLR---KKFKCDVCGNGYTSVKHLKRHKIKH 999
+ + CP C FS+ +++H+R C VC +TS H K
Sbjct: 64 YRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVCKK 123
Score = 36.5 bits (83), Expect = 0.022
Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Query: 810 ICPKCNKEFYSDRTMRRHLKQVHIEIKTFSCEECDKIFATREKLQRHWNYIHQGIRN 866
+CP C F S ++++H++ T C C K F + + H H +
Sbjct: 76 VCPLCLMPFSSSVSLKQHIRYTE---HTKVCPVCKKEFTSTDSALDHVCKKHNICVS 129
Score = 36.1 bits (82), Expect = 0.025
Identities = 17/113 (15%), Positives = 35/113 (30%), Gaps = 6/113 (5%)
Query: 1242 PCTVCSKNLSSPYRLKTHMLIHANNRVFTCEV----CGKGFIQKRYLEEHKRVHTGYKPY 1297
+++ + H L R+ V + + +
Sbjct: 16 NHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQF 75
Query: 1298 ACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKFYEFNTYVTHVHETHAI 1350
C LC F+ +L H + +C +C +F ++ + HV + H I
Sbjct: 76 VCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 35.7 bits (81), Expect = 0.043
Identities = 21/121 (17%), Positives = 38/121 (31%), Gaps = 13/121 (10%)
Query: 1619 KEYTVFCKKCQLGFLSKNELNVHNIKQHDAQPHTCPVCKKIFVNKFNLTTHKKLHLPMNR 1678
K+Y K + + H + + V I + + +L
Sbjct: 11 KKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQL---LDESSYLYRLL 67
Query: 1679 NHQ------CDTCGKSFTGNNHLKRHIYSVHLKRDTKFPCRLCSQEFDTKEQRKKHERKD 1732
+ C C F+ + LK+HI + C +C +EF + + H K
Sbjct: 68 ASKAISQFVCPLCLMPFSSSVSLKQHI----RYTEHTKVCPVCKKEFTSTDSALDHVCKK 123
Query: 1733 H 1733
H
Sbjct: 124 H 124
Score = 35.3 bits (80), Expect = 0.053
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 9/72 (12%)
Query: 592 LQDHMNTHTGNKYKCDVCDNGYSSLKHLKRHKMKHLQENGELPPSKIQKCPICHKIFIRN 651
L + + +++ C +C +SS LK+H + CP+C K F
Sbjct: 63 LYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHT---------KVCPVCKKEFTST 113
Query: 652 YMLRKHLDFVHG 663
H+ H
Sbjct: 114 DSALDHVCKKHN 125
Score = 34.5 bits (78), Expect = 0.091
Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 13/132 (9%)
Query: 288 EVHSKVRPHQC--KGCGKYFKSQRHLVQHERRVHLGVKKIKHSNFECFHCGAKFISRTHI 345
+V S + + KG + + H+ K++ + + + + +
Sbjct: 5 DVDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPE--QKRLIRAIVKTLIHNPQLLDESSY 62
Query: 346 ADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRADEMYKCDKCDKLFIEQ 405
+ + I VC +C ++++ LK+H + C C K F
Sbjct: 63 LYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHT---------KVCPVCKKEFTST 113
Query: 406 SEMVQHRDWVHG 417
+ H H
Sbjct: 114 DSALDHVCKKHN 125
Score = 33.4 bits (75), Expect = 0.20
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 1189 CSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTSYKRHLKQHDDSVTYYPCTVCSK 1248
+ + + + A + F C +CL F+ S K+H++ + + C VC K
Sbjct: 52 HNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHT---KVCPVCKK 108
Query: 1249 NLSSPYRLKTHMLIHAN 1265
+S H+ N
Sbjct: 109 EFTSTDSALDHVCKKHN 125
Score = 33.0 bits (74), Expect = 0.29
Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 10/100 (10%)
Query: 430 VKSNLKAHMRIHTGERPVCCHICGKKLRGKLKDHMLTHTGERPFGCEVCGSTYK----YK 485
V S K ++ H G + H+ ++L + H LT +R V + +
Sbjct: 6 VDSGSKKYLSNHKG---IFIHVTLEEL---KRYHQLTPEQKRLIRAIVKTLIHNPQLLDE 59
Query: 486 YYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHTE 525
+ +VC C F++ + H++
Sbjct: 60 SSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEH 99
Score = 32.6 bits (73), Expect = 0.46
Identities = 21/157 (13%), Positives = 44/157 (28%), Gaps = 32/157 (20%)
Query: 138 TDMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLS 197
+D+ + + + V + ++ +K + I + + L
Sbjct: 4 SDVDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLI-----HNPQLLD 58
Query: 198 RVGLEDHINNHTGEKGHICEICNRDFYSDAMLKRHLVKHSRMIKETSEEFVETGSITREE 257
+ +C +C F S LK+H+
Sbjct: 59 ESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--------------------- 97
Query: 258 WYKMVLQRVKTCPLCKKTYQSAKGMRLHIREVHSKVR 294
+ K CP+CKK + S H+ + H+
Sbjct: 98 ------EHTKVCPVCKKEFTSTDSALDHVCKKHNICV 128
Score = 31.1 bits (69), Expect = 1.6
Identities = 26/136 (19%), Positives = 50/136 (36%), Gaps = 17/136 (12%)
Query: 342 RTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRADEMYKCDKCDKL 401
+ ++++H GI HV LKR+++ + ++RA
Sbjct: 7 DSGSKKYLSNHKGIFIHVT---------LEELKRYHQLTPEQKRLIRAIVKTLIHNPQ-- 55
Query: 402 FIEQSEMVQHRDWVHGDKCYLCKICGARVKS--NLKAHMRIHTGERPVCCHICGKKLRGK 459
+++S + ++C +C S +LK H+R E C +C K+
Sbjct: 56 LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTS- 112
Query: 460 LKDHMLTHTGERPFGC 475
D L H ++ C
Sbjct: 113 -TDSALDHVCKKHNIC 127
Score = 29.5 bits (65), Expect = 4.3
Identities = 23/121 (19%), Positives = 37/121 (30%), Gaps = 14/121 (11%)
Query: 1810 LAAHKKIHLPIDKNCQCDVCGKSFARTFHL------------KSHISSVHLKREQRKKHE 1857
+ + K +L K V + R L K+ I + L E +
Sbjct: 6 VDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYR 65
Query: 1858 RKDHETQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELDVHNIKQ 1917
+ F C LC + L +H C +C+ F S + H K+
Sbjct: 66 LLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKV--CPVCKKEFTSTDSALDHVCKK 123
Query: 1918 H 1918
H
Sbjct: 124 H 124
Score = 29.5 bits (65), Expect = 4.5
Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 579 CNICGALFATKYTLQDHMNTHTGNKYKCDVCDNGYSSLKHLKRHKMKH 626
C +C F++ +L+ H+ + C VC ++S H K
Sbjct: 77 CPLCLMPFSSSVSLKQHIRYTE-HTKVCPVCKKEFTSTDSALDHVCKK 123
Score = 29.5 bits (65), Expect = 5.0
Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Query: 995 HKIKHMKESGELPPSMIHKCPTCYKIFTENHALKKHLDWVHGNKCHICKVCGAKIK--GN 1052
+ ++ CP C F+ + +LK+H+ + K +C VC + +
Sbjct: 58 DESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK--VCPVCKKEFTSTDS 115
Query: 1053 LQQHMETH 1060
H+
Sbjct: 116 ALDHVCKK 123
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 98
Score = 39.5 bits (91), Expect = 9e-04
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 256 EEWYKMVLQRVK-TCPLCKK-TYQSAKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQ 313
E+W + + +R + CP C T ++ G++ H+ +C+ C K FKS+ L
Sbjct: 13 EQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNY 72
Query: 314 HERRVHLGVKKIKHSN 329
H H ++
Sbjct: 73 HTMAEHSAKPSDAEAS 88
Score = 35.3 bits (80), Expect = 0.031
Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 114 EEWRQLVIKNAR-KCPICGD-RYKSGTDMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQ 171
E+W++ + + CP C K+ +++H C+ C K+F S +
Sbjct: 13 EQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNY 72
Query: 172 HRKVVH 177
H H
Sbjct: 73 HTMAEH 78
Score = 33.4 bits (75), Expect = 0.15
Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 798 DEWEILLRDKVRI-CPKCNKEFY-SDRTMRRHLKQVHIEIKTFSCEECDKIFATREKLQR 855
++W+ + ++ CP CN + +++H++ C+ C K F ++ L
Sbjct: 13 EQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNY 72
Query: 856 HWNYIH 861
H H
Sbjct: 73 HTMAEH 78
Score = 31.8 bits (71), Expect = 0.41
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 1039 CHICKVCGAKIKGNLQQHMET-HSGEKKICCHICGKKLRGR--LNEHMLTHTGERP 1091
C C V K L++HME + + C C K+ + + LN H + +P
Sbjct: 27 CPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 31.8 bits (71), Expect = 0.53
Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Query: 420 CYLCKICGARVKSNLKAHMRI-HTGERPVCCHICGKKLRGK--LKDHMLTHTGERP 472
C C + + LK HM + + + C C K+ + K L H + +P
Sbjct: 27 CPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 30.3 bits (67), Expect = 1.7
Identities = 16/59 (27%), Positives = 21/59 (35%), Gaps = 10/59 (16%)
Query: 1156 VFCKECNIGFYSSTHLHSHGIKVH------GLPPFICEHCSKPFTSKGNLTVHVKYYHA 1208
C CN+ + G+K H C+HC K F SK L H H+
Sbjct: 25 AVCPTCNVVTRKT----LVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS 79
Score = 29.9 bits (66), Expect = 2.5
Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 446 PVCCHICGKKLRGKLKDHMLT-HTGERPFGCEVCGSTYKYKYYLAVHMRKHTGERP 500
P C + K L G LK HM + C+ C +K K L H +P
Sbjct: 28 PTCNVVTRKTLVG-LKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 29.5 bits (65), Expect = 3.0
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 695 CHICGKKMRGKLKEHMLT-HTGERPYACEICGGTFKTKWYLGVHMRKHNGERP 746
C++ +K LK+HM + C+ C FK+K L H + +P
Sbjct: 30 CNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 29.5 bits (65), Expect = 3.4
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 156 CEVCGKRF-NSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHI 205
C C ++ +K+H +V K + +C HC K + S+ GL H
Sbjct: 27 CPTCNVVTRKTLVGLKKHMEVCQ---KLQDALKCQHCRKQFKSKAGLNYHT 74
Score = 29.1 bits (64), Expect = 3.8
Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 6/64 (9%)
Query: 661 VHGNKYHSCKVCGAEIKGS---LKEHMIV-HTGERKYCCHICGKKMRGK--LKEHMLTHT 714
+H C C + + LK+HM V + C C K+ + K L H +
Sbjct: 19 IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH 78
Query: 715 GERP 718
+P
Sbjct: 79 SAKP 82
Score = 29.1 bits (64), Expect = 3.8
Identities = 12/54 (22%), Positives = 19/54 (35%)
Query: 1066 ICCHICGKKLRGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERP 1119
C + K L G + + C+ C FK K+ L H + +P
Sbjct: 29 TCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 28.0 bits (61), Expect = 9.7
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1695 LKRHIYSVHLKRDTKFPCRLCSQEFDTKEQRKKHERKDHETQ 1736
LK+H+ K C+ C ++F +K H +H +
Sbjct: 41 LKKHMEVCQ-KLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK 81
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB:
2cse_V
Length = 1275
Score = 42.5 bits (99), Expect = 0.002
Identities = 8/51 (15%), Positives = 12/51 (23%)
Query: 1269 FTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
E + + Y C +CS L+ H H
Sbjct: 153 RIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 39.1 bits (90), Expect = 0.021
Identities = 5/50 (10%), Positives = 10/50 (20%)
Query: 1093 ACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAFSLHLKKH 1142
E + + + C C + H+ H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 38.7 bits (89), Expect = 0.023
Identities = 8/54 (14%), Positives = 15/54 (27%)
Query: 1238 VTYYPCTVCSKNLSSPYRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVH 1291
++ S +S ++ + C VC L+ H H
Sbjct: 150 MSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 37.1 bits (85), Expect = 0.081
Identities = 12/79 (15%), Positives = 21/79 (26%), Gaps = 9/79 (11%)
Query: 181 KQKKKFECAHCSKTYLSRVGLEDHINNHTGEKGHICEICNRDFYSDAMLKRHLVKHSR-- 238
K S + G+ C +C+ +S L H+ H
Sbjct: 148 KPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHG 207
Query: 239 -------MIKETSEEFVET 250
I+ EF+ +
Sbjct: 208 NMTLTSSEIQRHITEFISS 226
Score = 36.8 bits (84), Expect = 0.096
Identities = 21/160 (13%), Positives = 37/160 (23%), Gaps = 18/160 (11%)
Query: 1546 EESDELDDEEDTRNVTSDTKFPCRLCSQEFGTKKQRKKHERKDHETRGVFSCDLCSYTST 1605
E+ + T + P + + KK + + + +
Sbjct: 51 EQYRARPGIASVQRATESAELPMKNNDEGTPDKKGNTRGDLVNEHSEA------KDEADE 104
Query: 1606 RKYYLVKHKSRHIKEYTVFCKKCQLGFLSKNEL----NVHNIKQHDAQPHT---CPVCKK 1658
K + + T G + NEL NV N + +P +
Sbjct: 105 ATQKQAKDTDKSKAQVT----YSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSA 160
Query: 1659 IFVNKFNLTTHKKLHLPMNRNHQCDTCGKSFTGNNHLKRH 1698
I +QC C L H
Sbjct: 161 IVSKHPARVGLPPTA-SSGHGYQCHVCSAVLFSPLDLDAH 199
Score = 36.4 bits (83), Expect = 0.14
Identities = 9/62 (14%), Positives = 15/62 (24%), Gaps = 6/62 (9%)
Query: 266 VKTCPLCKKTYQSAKGMRLHIREV------HSKVRPHQCKGCGKYFKSQRHLVQHERRVH 319
P+ + ++ + S +QC C S L H
Sbjct: 145 SNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHG 204
Query: 320 LG 321
L
Sbjct: 205 LH 206
Score = 36.0 bits (82), Expect = 0.15
Identities = 7/57 (12%), Positives = 14/57 (24%)
Query: 472 PFGCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAARPAFNLHLKRHTERGD 528
E + + Y C+ C + + H+ H G+
Sbjct: 152 TRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGN 208
Score = 36.0 bits (82), Expect = 0.16
Identities = 6/50 (12%), Positives = 9/50 (18%)
Query: 720 ACEICGGTFKTKWYLGVHMRKHNGERPYMCSECGQSFAARSAFSLHLKKH 769
E + Y C C + H+ H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 36.0 bits (82), Expect = 0.17
Identities = 7/30 (23%), Positives = 10/30 (33%)
Query: 1085 THTGERPYACEFCGSSFKDKSYLRIHIRKH 1114
T + Y C C + L H+ H
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 35.6 bits (81), Expect = 0.22
Identities = 9/76 (11%), Positives = 23/76 (30%), Gaps = 2/76 (2%)
Query: 1295 KPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGAKFYEFNTYVTHVHETHAILPRV 1354
+ S ++ + + C +C A + HV +H + +
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVA-SHGLHGNM 209
Query: 1355 IVTKFKV-EDFQFFVC 1369
+T ++ F+
Sbjct: 210 TLTSSEIQRHITEFIS 225
Score = 35.2 bits (80), Expect = 0.25
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 712 THTGERPYACEICGGTFKTKWYLGVHMRKH 741
T + Y C +C + L H+ H
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 34.8 bits (79), Expect = 0.39
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 326 KHSNFECFHCGAKFISRTHIADHMTSH 352
++C C A S + H+ SH
Sbjct: 177 SGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 34.8 bits (79), Expect = 0.40
Identities = 9/70 (12%), Positives = 18/70 (25%)
Query: 1167 SSTHLHSHGIKVHGLPPFICEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTS 1226
S + G + I E S + + ++C++C
Sbjct: 136 SGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLD 195
Query: 1227 YKRHLKQHDD 1236
H+ H
Sbjct: 196 LDAHVASHGL 205
Score = 34.4 bits (78), Expect = 0.51
Identities = 7/44 (15%), Positives = 16/44 (36%)
Query: 556 KIKRENVPSTKDQSHKKRDQKIECNICGALFATKYTLQDHMNTH 599
I ++ +C++C A+ + L H+ +H
Sbjct: 160 AIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.7 bits (76), Expect = 0.84
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 466 THTGERPFGCEVCGSTYKYKYYLAVHMRKH 495
T + + C VC + L H+ H
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.7 bits (76), Expect = 0.90
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 598 THTGNKYKCDVCDNGYSSLKHLKRHKMKH-LQENGELPPSKIQK 640
+G+ Y+C VC S L H H L N L S+IQ+
Sbjct: 175 ASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTLTSSEIQR 218
Score = 32.9 bits (74), Expect = 1.5
Identities = 7/49 (14%), Positives = 12/49 (24%)
Query: 1769 CKICQLGFLSKNELDVHNIKQHDAQPHTCPVCKKIFVNKVTLAAHKKIH 1817
+ + C VC + + + L AH H
Sbjct: 155 AEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 41.6 bits (97), Expect = 0.003
Identities = 76/536 (14%), Positives = 168/536 (31%), Gaps = 152/536 (28%)
Query: 754 QSFAARSAFSLHLKKHAGFKQTIECEYCHNTFTFETGLMGVVTRDEWEILLRDK-VRICP 812
+++ R +L H ++E T + ++ L+++ +I P
Sbjct: 2 DAYSTRP-LTLS---HG----SLEH-----VLLVPTASFFIASQ------LQEQFNKILP 42
Query: 813 KCNKEFYSDRT-------MRRHLKQVHIEIKTFSCEECDKIFATREKLQRHWNYIHQGI- 864
+ + F +D + + L ++ S E K+ + L
Sbjct: 43 EPTEGFAADDEPTTPAELVGKFLG--YVS----SLVEPSKVGQFDQVLNLCLTEFENCYL 96
Query: 865 RNTGPN----QLLECHYCGITKNNKTLLRDHISA-HLGIKPYCCIFCEEKYFSKKSLKRH 919
+ +LL+ + + K K L++++I+A + +P+ ++K S +L R
Sbjct: 97 EGNDIHALAAKLLQENDTTLVKT-KELIKNYITARIMAKRPF-----DKKSNS--ALFRA 148
Query: 920 -EAKHNKVYNKAQY--Q----DY--QIQDLSMDQYRELVQS-KERKCPKCEKEFSTPRYM 969
+ ++ A + Q DY +++DL Y LV + + T
Sbjct: 149 VGEGNAQLV--AIFGGQGNTDDYFEELRDLY-QTYHVLVGDLIKFSAETLSELIRTTLDA 205
Query: 970 RKHLRKKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPS--MIH---KCP-------TC 1017
K + ++ ++ ++ P ++ CP
Sbjct: 206 EKVFTQGL--NI---------------LEWLENPSNTPDKDYLLSIPISCPLIGVIQLAH 248
Query: 1018 YKIFTENHAL--KKHLDWVHGNKCHICKVCGAKI----------KGNLQQHME--THSGE 1063
Y + + + ++ G H + A ++++ + G
Sbjct: 249 YVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIG- 307
Query: 1064 KKICCHIC--GKKLRGRLNE-----------HMLTHTGER-----PYACEFCGSSFKDKS 1105
+ C+ L + E ML+ + Y + K
Sbjct: 308 --VRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGK- 364
Query: 1106 YLRIHIRKHNGERPFTCSECGQSFAARS--AFSLHLKK-HAGSHILRRHIGYTVFCKECN 1162
++ I NG + S G +S +L L+K A S + + I F +
Sbjct: 365 --QVEISLVNGAKNLVVS--G---PPQSLYGLNLTLRKAKAPSGLDQSRIP---FSER-K 413
Query: 1163 IGFYS-----STHLHSHGIKVHGLPPFICEHCSK---PFTSKGNLTVHVKYYHAKT 1210
+ F + ++ HSH + I + K F +K ++ + V Y
Sbjct: 414 LKFSNRFLPVASPFHSHLLV--PASDLINKDLVKNNVSFNAK-DIQIPV--YDTFD 464
Score = 39.3 bits (91), Expect = 0.018
Identities = 81/573 (14%), Positives = 140/573 (24%), Gaps = 237/573 (41%)
Query: 1118 RPFTCS----EC------GQSFAA---RSAFSLHL----KKHAGS-------HILRRHIG 1153
RP T S E F A + F+ L + A ++ + +G
Sbjct: 7 RPLTLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLG 66
Query: 1154 YTVFCKECN-IGFYSS------THLHS---HGIKVHGLPPFICEHCSKPFTSKGNLTVHV 1203
Y E + +G + T + G +H L + + L +
Sbjct: 67 YVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKEL---I 123
Query: 1204 K-YYHAKTLFECNICLKTFNFKTSYKRHLKQHDDSVTYYPCTVCSKNLSSPYRLKTHMLI 1262
K Y A+ + KR + +S L
Sbjct: 124 KNYITARIMA---------------KRPFDKKSNSA----------------------LF 146
Query: 1263 HA----NNRVFTCEVCGKGFIQ---KRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIH 1315
A N ++ + G G Q Y EE + ++ Y
Sbjct: 147 RAVGEGNAQLVA--IFG-G--QGNTDDYFEELRDLYQTYHVL------------------ 183
Query: 1316 RKLHLNIKDFICDLCGAKFYEFNTYVTHVHETHAILPRVI-VTKF-----KVEDFQFFVC 1369
+ D I E + + + + + + ++ D + +
Sbjct: 184 ------VGDLI-KFSAETLSEL---IRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLS 233
Query: 1370 E--SM------QSAKSTCVLCKKVFSTRENCTNHI--MECHSYDVF---------EWKDK 1410
S Q A V K + T +++ HS + W+
Sbjct: 234 IPISCPLIGVIQLA-HYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWES- 291
Query: 1411 GVIKEHINPLFLK------KFAFALNC------PVCKLYFD--RESDFH-----SHMQSY 1451
F F + P L +S + S M S
Sbjct: 292 ----------FFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSI 341
Query: 1452 HN-----SHSYCMKCN--------MYI--FNSR----------------LQLHKRKHTRE 1480
N Y K N + I N L L K K
Sbjct: 342 SNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSG 401
Query: 1481 EEQWTKVNIEYSCDCCEM----SW-----SNPKDFGQHLNLVKCSYCANAAFCSSKALTR 1531
+Q I +S E S ++P F H A+ +K L +
Sbjct: 402 LDQS---RIPFS----ERKLKFSNRFLPVASP--F--H-----SHLLVPASDLINKDLVK 445
Query: 1532 HLVEEHSDKL--------CGED--EESDELDDE 1554
+ V ++ + G D S + +
Sbjct: 446 NNVSFNAKDIQIPVYDTFDGSDLRVLSGSISER 478
Score = 37.7 bits (87), Expect = 0.045
Identities = 25/146 (17%), Positives = 41/146 (28%), Gaps = 48/146 (32%)
Query: 1430 NCPVCKLYFDRESDFHSHMQSYHNSHSYCMKCNMYIFNSRLQLH----KRKHTRE----- 1480
+ ++R +D H +Y S + N L +H K K RE
Sbjct: 1638 TSKAAQDVWNR-ADNHF-KDTYGFSILDIVINNP----VNLTIHFGGEKGKRIRENYSAM 1691
Query: 1481 --------EEQWTKVNIEYSCDCCEMSWSNPKDFGQHLNLVKCSYCANA--A-FCSSKAL 1529
+ + K+ E + ++ + K L+ A KA
Sbjct: 1692 IFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGL---LSAT-----QFTQPALTLMEKAA 1743
Query: 1530 TRHLVEE-----------HSDKLCGE 1544
L + HS L GE
Sbjct: 1744 FEDLKSKGLIPADATFAGHS--L-GE 1766
Score = 36.6 bits (84), Expect = 0.12
Identities = 24/141 (17%), Positives = 51/141 (36%), Gaps = 42/141 (29%)
Query: 396 DKCDKLFIEQ-----SEMVQH---RDWVH--GDKCYLCKICGARVKSNLKAHMRIHTGER 445
++ D F + ++V + +H G+K G R++ N A + E
Sbjct: 1647 NRADNHFKDTYGFSILDIVINNPVNLTIHFGGEK-------GKRIRENYSAMIF----ET 1695
Query: 446 PVCCHICGKKLRGKLKDHMLTHTGERPFGCEVCGSTYKYKYY-----LAV------HMRK 494
V + +K+ ++ +H ++T G + +T + + ++
Sbjct: 1696 IVDGKLKTEKIFKEINEHSTSYTFRSEKG--LLSATQ----FTQPALTLMEKAAFEDLKS 1749
Query: 495 HTGERPYVCNYCGHS---FAA 512
G P + GHS +AA
Sbjct: 1750 K-GLIPADATFAGHSLGEYAA 1769
Score = 31.2 bits (70), Expect = 5.0
Identities = 30/181 (16%), Positives = 44/181 (24%), Gaps = 69/181 (38%)
Query: 1776 FLSKNELDVHNIKQHDAQPHTCPVCKKIFVNKVTLAAHKKIHLPIDKNCQ---------- 1825
+L N D+H + Q + + K + K + A P DK
Sbjct: 95 YLEGN--DIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEG 152
Query: 1826 ----CDVCG-------------------KSFARTFHLKSHISSVHLKREQRKKHERKDHE 1862
+ G S+ L R + +
Sbjct: 153 NAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDL---IKFSAETLSELIRTTLDAEKVF 209
Query: 1863 TQGLFSCDLCS---YTSTQ--KYYLVK--------------HKSRHIKDYNVFCKICQLG 1903
TQGL ++ S K YL+ H Y V K LG
Sbjct: 210 TQGL---NILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAH-------YVVTAK--LLG 257
Query: 1904 F 1904
F
Sbjct: 258 F 258
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein;
NMR {Homo sapiens}
Length = 37
Score = 33.9 bits (78), Expect = 0.020
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 1087 TGERPYACEF--CGSSFKDKSYLRIHIRKHNGER 1118
++ + C CG + S+LR H+R H GER
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 29.6 bits (67), Expect = 0.67
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 468 TGERPFGCEV--CGSTYKYKYYLAVHMRKHTGER 499
++ C + CG Y +L H+R HTGER
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 28.5 bits (64), Expect = 1.8
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 432 SNLKAHMRIHTGER 445
S+L+AH+R HTGER
Sbjct: 24 SHLRAHLRWHTGER 37
Score = 27.7 bits (62), Expect = 2.7
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 714 TGERPYACEI--CGGTFKTKWYLGVHMRKHNGER 745
++ + C I CG + +L H+R H GER
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 27.3 bits (61), Expect = 3.8
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 688 TGERKYCCHI--CGK--KMRGKLKEHMLTHTGER 717
++++ CHI CGK L+ H+ HTGER
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 26.2 bits (58), Expect = 9.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 291 SKVRPHQC--KGCGKYFKSQRHLVQHERRVHLGVK 323
K + H C +GCGK + HL H R H G +
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRW-HTGER 37
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
4-stranded parallel/anti-parallel beta- sheet, structural
genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 102
Score = 35.5 bits (81), Expect = 0.026
Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 1728 HERKDHETQGLFSCDLCSYTSTQKYYLVKH-KSRH---IKDYNVFCKICQLGFLSKNELD 1783
H +++ + +G + C C++ + H S H + + + C C + L
Sbjct: 8 HNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALS 67
Query: 1784 VHNIKQH 1790
HN+K H
Sbjct: 68 EHNLKYH 74
Score = 35.5 bits (81), Expect = 0.026
Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 1856 HERKDHETQGLFSCDLCSYTSTQKYYLVKH-KSRH---IKDYNVFCKICQLGFLSKNELD 1911
H +++ + +G + C C++ + H S H + + + C C + L
Sbjct: 8 HNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALS 67
Query: 1912 VHNIKQH 1918
HN+K H
Sbjct: 68 EHNLKYH 74
Score = 34.7 bits (79), Expect = 0.044
Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 1584 HERKDHETRGVFSCDLCSYTSTRKYYLVKH-KSRH---IKEYTVFCKKCQLGFLSKNELN 1639
H +++ + G + C C++ + H S H + + C +C + L+
Sbjct: 8 HNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALS 67
Query: 1640 VHNIKQH 1646
HN+K H
Sbjct: 68 EHNLKYH 74
Score = 33.2 bits (75), Expect = 0.18
Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Query: 1082 HMLTHTGERPYACEFCGSSFKDKSYLRIHIR-KHNGER---PFTCSECGQSFAARSAFSL 1137
+ E Y C++C D + H+ +H + C EC A S
Sbjct: 9 NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSE 68
Query: 1138 HLKKH 1142
H K+
Sbjct: 69 HNLKY 73
Score = 32.8 bits (74), Expect = 0.23
Identities = 13/62 (20%), Positives = 18/62 (29%), Gaps = 3/62 (4%)
Query: 268 TCPLCKKTYQSAKGMRLHIREVHSKVR---PHQCKGCGKYFKSQRHLVQHERRVHLGVKK 324
C C H+ H V + C C K L +H + H G +
Sbjct: 20 ECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEEN 79
Query: 325 IK 326
K
Sbjct: 80 FK 81
Score = 31.3 bits (70), Expect = 0.67
Identities = 13/85 (15%), Positives = 24/85 (28%), Gaps = 1/85 (1%)
Query: 139 DMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSR 198
H + C+ C + + H H + + C C+
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 199 VGLEDHI-NNHTGEKGHICEICNRD 222
L +H H GE+ + R+
Sbjct: 64 DALSEHNLKYHPGEENFKLTMVKRN 88
Score = 31.3 bits (70), Expect = 0.75
Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVHIEIK---TFSCEECDKIFATREKLQRHWNYIHQGIRNT 867
C C + H+ H + ++ C EC+ + + L H H G N
Sbjct: 21 CKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENF 80
Score = 31.3 bits (70), Expect = 0.76
Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Query: 1678 RNHQCDTCGKSFTGNNHLKRHIYSVH--LKRDTKFPCRLCSQEFDTKEQRKKHERKDHET 1735
++C C N H+ S H + ++ + C C+ + +H K H
Sbjct: 17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 76
Query: 1736 QGLFSCDL 1743
+ F +
Sbjct: 77 EENFKLTM 84
Score = 30.9 bits (69), Expect = 0.93
Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Query: 312 VQHERRVHLGVKKIKHSNFECFHCGAKFISRTHIADHMTS-HTGIK---NHVCSICQSTY 367
+ H H K +EC +C + H+ S H + ++VC C
Sbjct: 1 MAHHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLT 60
Query: 368 TTARGLKRHNKNH 380
L HN +
Sbjct: 61 KRYDALSEHNLKY 73
Score = 30.5 bits (68), Expect = 1.3
Identities = 11/55 (20%), Positives = 15/55 (27%), Gaps = 4/55 (7%)
Query: 1158 CKECNIGFYSSTHLHSHGIKVH----GLPPFICEHCSKPFTSKGNLTVHVKYYHA 1208
CK C H H ++C C+ L+ H YH
Sbjct: 21 CKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHP 75
Score = 30.5 bits (68), Expect = 1.6
Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 4/70 (5%)
Query: 1284 LEEHKRVHTGYKPYACDLCSKQFTQKSTLNIH-RKLHLNIK---DFICDLCGAKFYEFNT 1339
+++ Y C C+ Q + H H N+ ++C C ++
Sbjct: 6 HHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDA 65
Query: 1340 YVTHVHETHA 1349
H + H
Sbjct: 66 LSEHNLKYHP 75
Score = 29.4 bits (65), Expect = 3.9
Identities = 14/65 (21%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Query: 709 HMLTHTGERPYACEICGGTFKTKWYLGVHMR-KHNGER---PYMCSECGQSFAARSAFSL 764
+ E Y C+ C H+ +H Y+C EC A S
Sbjct: 9 NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSE 68
Query: 765 HLKKH 769
H K+
Sbjct: 69 HNLKY 73
Score = 28.6 bits (63), Expect = 6.4
Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 858 NYIHQGIRNTGPNQLLECHYCGITKNNKTLLRDHI-SAHLGIK---PYCCIFCEEKYFSK 913
++ H +N EC YC + + H+ S H + Y C+ C
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 914 KSLKRHEAKH 923
+L H K+
Sbjct: 64 DALSEHNLKY 73
Score = 28.6 bits (63), Expect = 7.1
Identities = 17/78 (21%), Positives = 27/78 (34%), Gaps = 8/78 (10%)
Query: 376 HNKNHLREAGVLRADEMYKCDKCDKLFIEQSEMVQHRDWVHGD----KCYLCKICGARVK 431
H+ +H + Y+C C + + H D H + Y+C C K
Sbjct: 3 HHHHHHNQQNKKVEGG-YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTK 61
Query: 432 --SNLKAH-MRIHTGERP 446
L H ++ H GE
Sbjct: 62 RYDALSEHNLKYHPGEEN 79
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 45
Score = 33.7 bits (76), Expect = 0.031
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 1086 HTGERPYACEFCGSSFKDKSYLRIHIRKHNG 1116
+GE+PY+C CG FK K + H+R H+G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 33.0 bits (74), Expect = 0.049
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 713 HTGERPYACEICGGTFKTKWYLGVHMRKHNG 743
+GE+PY+C +CG FK K + H+R H+G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 31.4 bits (70), Expect = 0.20
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 467 HTGERPFGCEVCGSTYKYKYYLAVHMRKHTG 497
+GE+P+ C VCG +K K ++ H+R H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 31.0 bits (69), Expect = 0.30
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 1114 HNGERPFTCSECGQSFAARSAFSLHLKKHAGS 1145
+GE+P++C CG F + S H++ H GS
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 36
Score = 30.7 bits (68), Expect = 0.40
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 741 HNGERPYMCSECGQSFAARSAFSLHLKKHAG 771
+GE+PY C CG F + S H++ H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 29.5 bits (65), Expect = 0.89
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 1291 HTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
+G KPY+C +C +F +K ++ H + H
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33
Score = 28.0 bits (61), Expect = 2.9
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 290 HSKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKK 324
S +P+ C CG FK + + H R V K
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 39
Score = 27.2 bits (59), Expect = 5.4
Identities = 8/40 (20%), Positives = 16/40 (40%)
Query: 832 HIEIKTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPNQ 871
K +SC C F ++++ H + +GP+
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSS 44
Score = 27.2 bits (59), Expect = 5.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 495 HTGERPYVCNYCGHSFAARPAFNLHLKRH 523
+GE+PY C CG F + + H++ H
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33
Score = 26.8 bits (58), Expect = 7.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 1263 HANNRVFTCEVCGKGFIQKRYLEEHKRVHTG 1293
+ + ++C VCG F +K + H R H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
classical zinc finger, transcription; NMR {Homo sapiens}
Length = 30
Score = 32.8 bits (74), Expect = 0.038
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 1090 RPYACEFCGSSFKDKSYLRIHIRKHNGER 1118
+PY C C F D L+ H+R H GE+
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 27.4 bits (60), Expect = 3.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 745 RPYMCSECGQSFAARSAFSLHLKKHAGFK 773
+PY+C C + FA A H++ H G K
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 26.6 bits (58), Expect = 6.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 499 RPYVCNYCGHSFAARPAFNLHLKRHT 524
+PYVC +C FA A H++ HT
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHT 27
Score = 26.3 bits (57), Expect = 8.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 184 KKFECAHCSKTYLSRVGLEDHINNHTGEK 212
K + C HC + + L+ H+ HTGEK
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 26.3 bits (57), Expect = 9.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 1295 KPYACDLCSKQFTQKSTLNIHRKLH 1319
KPY C C +QF L H ++H
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIH 26
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
SCOP: g.37.1.1 PDB: 1va2_A
Length = 31
Score = 32.2 bits (74), Expect = 0.060
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 1090 RPYAC--EFCGSSFKDKSYLRIHIRKHNGER 1118
RP+ C +CG F L+ H R H GE+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 27.2 bits (61), Expect = 4.4
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 471 RPFGC--EVCGSTYKYKYYLAVHMRKHTGER 499
RPF C CG + L H R HTGE+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 26.8 bits (60), Expect = 6.4
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 717 RPYAC--EICGGTFKTKWYLGVHMRKHNGER 745
RP+ C CG F L H R H GE+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 26.4 bits (59), Expect = 6.6
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 1295 KPYACD--LCSKQFTQKSTLNIHRKLHLNIK 1323
+P+ C C K+FT+ L H++ H K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription;
NMR {Mus musculus} SCOP: g.37.1.1
Length = 35
Score = 32.4 bits (73), Expect = 0.074
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 495 HTGERPYVCNYCGHSFAARPAFNLHLKRHTE 525
+G+RP+VC C +F + HLK HT+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 30.9 bits (69), Expect = 0.24
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 713 HTGERPYACEICGGTFKTKWYLGVHMRKH 741
+G+RP+ C IC F TK H++ H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 30.5 bits (68), Expect = 0.27
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 1086 HTGERPYACEFCGSSFKDKSYLRIHIRKH 1114
+G+RP+ C C S+F K+ H++ H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 30.5 bits (68), Expect = 0.31
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 741 HNGERPYMCSECGQSFAARSAFSLHLKKH 769
+G+RP++C C +F ++ + HLK H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 29.7 bits (66), Expect = 0.61
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 467 HTGERPFGCEVCGSTYKYKYYLAVHMRKHT 496
+G+RPF C +C S + K A H++ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 29.3 bits (65), Expect = 0.74
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 1114 HNGERPFTCSECGQSFAARSAFSLHLKKHAGS 1145
+G+RPF C C +F ++ + HLK H +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 28.2 bits (62), Expect = 2.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 37 HTGLKPYICHICKNSYVAAKGLKRHLKRH 65
+G +P++C IC +++ RHLK H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 27.8 bits (61), Expect = 3.0
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 1291 HTGYKPYACDLCSKQFTQKSTLNIHRKLHLN 1321
+G +P+ C +C FT K+ H K+H +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 26.6 bits (58), Expect = 7.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 1212 FECNICLKTFNFKTSYKRHLKQHDDSVT 1239
F C ICL F K + RHLK H D+++
Sbjct: 8 FVCRICLSAFTTKANCARHLKVHTDTLS 35
Score = 26.6 bits (58), Expect = 7.8
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 1263 HANNRVFTCEVCGKGFIQKRYLEEHKRVHT 1292
+ R F C +C F K H +VHT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
1are_A
Length = 29
Score = 31.9 bits (73), Expect = 0.089
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 1090 RPYACEFCGSSFKDKSYLRIHIRKHNGER 1118
R + CE C +F + +L+ H R H E+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 29.6 bits (67), Expect = 0.55
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 1267 RVFTCEVCGKGFIQKRYLEEHKRVHTGYK 1295
R F CEVC + F ++ +L+ H R HT K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 29.2 bits (66), Expect = 0.76
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 975 KKFKCDVCGNGYTSVKHLKRHKIKHMKE 1002
+ F C+VC + +HLKRH H E
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 28.8 bits (65), Expect = 0.98
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 471 RPFGCEVCGSTYKYKYYLAVHMRKHTGER 499
R F CEVC + + +L H R HT E+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 28.4 bits (64), Expect = 1.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 1678 RNHQCDTCGKSFTGNNHLKRHIYS 1701
R+ C+ C ++F HLKRH S
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRS 24
Score = 28.1 bits (63), Expect = 1.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 294 RPHQCKGCGKYFKSQRHLVQHER 316
R C+ C + F Q HL +H R
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYR 23
Score = 27.7 bits (62), Expect = 2.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 717 RPYACEICGGTFKTKWYLGVHMRKHNGER 745
R + CE+C F + +L H R H E+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 27.3 bits (61), Expect = 3.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 603 KYKCDVCDNGYSSLKHLKRHKMKHLQE 629
+ C+VC ++ +HLKRH H E
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 26.5 bits (59), Expect = 7.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 1825 QCDVCGKSFARTFHLKSHISS 1845
C+VC ++FAR HLK H S
Sbjct: 4 VCEVCTRAFARQEHLKRHYRS 24
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein,
helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis}
SCOP: g.37.1.4 g.37.1.4
Length = 127
Score = 34.6 bits (78), Expect = 0.090
Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 3/89 (3%)
Query: 156 CEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGE-KGH 214
C+VC S + H + K ++ + ++ GE +
Sbjct: 35 CKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSK 94
Query: 215 ICEICNRDFYSDAMLKRHLV--KHSRMIK 241
C +CN F S + + H + H + ++
Sbjct: 95 CCPVCNMTFSSPVVAESHYIGKTHIKNLR 123
Score = 33.4 bits (75), Expect = 0.19
Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Query: 1768 FCKICQLGFLSKNELDVH-NIKQHD---AQPHTCPVCKKIFVNKVTLAAHKKIHLPIDKN 1823
CK+C +S+++ H ++H + + K AA +I D++
Sbjct: 34 QCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRS 93
Query: 1824 CQCDVCGKSFARTFHLKSHISS-VHLKREQRKKH 1856
C VC +F+ +SH H+K + ++
Sbjct: 94 KCCPVCNMTFSSPVVAESHYIGKTHIKNLRLREQ 127
Score = 29.5 bits (65), Expect = 4.2
Identities = 15/84 (17%), Positives = 24/84 (28%), Gaps = 4/84 (4%)
Query: 1181 LPPFICEHCSKPFTSKGNLTVHVK----YYHAKTLFECNICLKTFNFKTSYKRHLKQHDD 1236
C+ CS S+ H + + N + K + D
Sbjct: 30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDG 89
Query: 1237 SVTYYPCTVCSKNLSSPYRLKTHM 1260
C VC+ SSP ++H
Sbjct: 90 EDRSKCCPVCNMTFSSPVVAESHY 113
Score = 29.5 bits (65), Expect = 4.5
Identities = 19/84 (22%), Positives = 29/84 (34%), Gaps = 3/84 (3%)
Query: 1429 LNCPVCKLYFDRESDFHSHMQSYHNSHSYCMKCNMYIFNSRLQL-HKRKHTREEEQWTKV 1487
C VC ES +H QS H+ ++ M I + K+ E
Sbjct: 33 TQCKVCSAVLISESQKLAHYQS--RKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGE 90
Query: 1488 NIEYSCDCCEMSWSNPKDFGQHLN 1511
+ C C M++S+P H
Sbjct: 91 DRSKCCPVCNMTFSSPVVAESHYI 114
Score = 28.8 bits (63), Expect = 8.6
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 5/88 (5%)
Query: 1624 FCKKCQLGFLSKNELNVH-NIKQHD---AQPHTCPVCKKIFVNKFNLTTHKKLHLPMNRN 1679
CK C +S+++ H ++H + + K ++ +R+
Sbjct: 34 QCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRS 93
Query: 1680 HQCDTCGKSFTGNNHLKRHIYS-VHLKR 1706
C C +F+ + H H+K
Sbjct: 94 KCCPVCNMTFSSPVVAESHYIGKTHIKN 121
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 96
Score = 33.7 bits (76), Expect = 0.094
Identities = 12/53 (22%), Positives = 16/53 (30%)
Query: 1156 VFCKECNIGFYSSTHLHSHGIKVHGLPPFICEHCSKPFTSKGNLTVHVKYYHA 1208
V C C + ++ F C HC K S + HV H
Sbjct: 35 VSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHN 87
Score = 33.3 bits (75), Expect = 0.14
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 245 EEFVETGSITREEWYKMVLQRVK-TCPLCKK-TYQSAKGMRLHIREVHSKVRPHQCKGCG 302
E V E+WY ++ + +CP C+ ++ +G++ H+ + K C CG
Sbjct: 12 EPPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHME--NCKQEMFTCHHCG 69
Query: 303 KYFKSQRHLVQHERRVH 319
K +S + H H
Sbjct: 70 KQLRSLAGMKYHVMANH 86
Score = 30.2 bits (67), Expect = 1.5
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 419 KCYLCKICGARVKSNLKAHMRIHTGERPVCCHICGKKLRGK--LKDHMLTHTGERPFGCE 476
C C+ G + LK HM + CH CGK+LR +K H++ + P G
Sbjct: 36 SCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPS 94
Score = 30.2 bits (67), Expect = 1.6
Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query: 114 EEWRQLVIKNAR-KCPICGD-RYKSGTDMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQ 171
E+W ++ CP C K+ +++H + C CGK+ S+ +K
Sbjct: 23 EQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCH--HCGKQLRSLAGMKY 80
Query: 172 HRKVVH 177
H H
Sbjct: 81 HVMANH 86
Score = 30.2 bits (67), Expect = 1.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 264 QRVKTCPLCKKTYQSAKGMRLHIREVHS 291
Q + TC C K +S GM+ H+ H+
Sbjct: 60 QEMFTCHHCGKQLRSLAGMKYHVMANHN 87
Score = 29.8 bits (66), Expect = 2.1
Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 797 RDEWEILLRDKVRI-CPKCNKEFYSD-RTMRRHLKQVHIEIKTFSCEECDKIFATREKLQ 854
++W + + DK + CP C +++H++ E+ F+C C K + ++
Sbjct: 22 EEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEM--FTCHHCGKQLRSLAGMK 79
Query: 855 RHWNYIH 861
H H
Sbjct: 80 YHVMANH 86
Score = 29.8 bits (66), Expect = 2.3
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 134 YKSGTDMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSK 193
Y +G+ + Y ++ D C C ++ R HM +++ F C HC K
Sbjct: 16 YAAGSLEEQWYLEIVDKGS-VSCPTC----QAVGRKTIEGLKKHMENCKQEMFTCHHCGK 70
Query: 194 TYLSRVGLEDHI 205
S G++ H+
Sbjct: 71 QLRSLAGMKYHV 82
Score = 29.1 bits (64), Expect = 3.7
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 945 YRELVQSKERKCPKCEK-EFSTPRYMRKHLRK----KFKCDVCGNGYTSVKHLKRH 995
Y E+V CP C+ T ++KH+ F C CG S+ +K H
Sbjct: 26 YLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYH 81
Score = 28.3 bits (62), Expect = 8.0
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 1038 KCHICKVCGAKIKGNLQQHMETHSGEKKICCHICGKKLRGR--LNEHMLTHTGERPYACE 1095
C C+ G K L++HME E C H CGK+LR + H++ + P
Sbjct: 36 SCPTCQAVGRKTIEGLKKHMENCKQEMFTCHH-CGKQLRSLAGMKYHVMANHNSLPSGPS 94
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein
structure initiative, midwest center for structural
genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP:
e.59.1.1
Length = 309
Score = 35.2 bits (80), Expect = 0.17
Identities = 15/98 (15%), Positives = 24/98 (24%), Gaps = 24/98 (24%)
Query: 127 CPICGDRYKSGTDMRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQHRKVVHMGIKQKKKF 186
CP CG +G R C +C ++ R+K
Sbjct: 185 CPACGSPPMAG---MIRQGGKETGLRYLSCSLCACEWH-YVRIK---------------- 224
Query: 187 ECAHC---SKTYLSRVGLEDHINNHTGEKGHICEICNR 221
C+HC + + + C C
Sbjct: 225 -CSHCEESKHLAYLSLEHDGQPAEKAVLRAETCPSCQG 261
Score = 32.1 bits (72), Expect = 1.6
Identities = 21/109 (19%), Positives = 29/109 (26%), Gaps = 19/109 (17%)
Query: 627 LQENGELPPSKIQKCPICHKIFIRNYMLRKHLDFVHGNKYHSCKVCGAEIKGSLKEHMIV 686
L+E + CP C + + + G +Y SC +C E H
Sbjct: 171 LEEGAVVETESRTLCPACGSPPM--AGMIRQGGKETGLRYLSCSLCACE------WHY-- 220
Query: 687 HTGERKYCCHICGKKMRGKL-----KEHMLTHTGERPYACEICGGTFKT 730
R C H C + R C C G K
Sbjct: 221 ---VRIKCSH-CEESKHLAYLSLEHDGQPAEKAVLRAETCPSCQGYLKQ 265
Score = 31.7 bits (71), Expect = 2.0
Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 17/92 (18%)
Query: 1040 HICKVCGAKIKGNLQQHMETHSGEKKICCHICGKKLRGRLNEHMLTHTGERPYACEFCGS 1099
+C CG+ + + +G + + C +C C C
Sbjct: 183 TLCPACGSPPMAGMIRQGGKETGLRYLSCSLCA------------CEWHYVRIKCSHCEE 230
Query: 1100 SFKDKSYLRIHIRKHNGERPF----TCSECGQ 1127
S K +YL + E+ TC C
Sbjct: 231 S-KHLAYLSLEHDGQPAEKAVLRAETCPSCQG 261
Score = 31.7 bits (71), Expect = 2.1
Identities = 15/62 (24%), Positives = 20/62 (32%), Gaps = 13/62 (20%)
Query: 956 CPKCEKEFSTPRYMRKHLRKKFKCDVCGNGYTSVKHLKRHKIKHMKESGELPPSMIHKCP 1015
C C E+ R KC C KHL ++H + E CP
Sbjct: 211 CSLCACEWHYVR---------IKCSHCEES----KHLAYLSLEHDGQPAEKAVLRAETCP 257
Query: 1016 TC 1017
+C
Sbjct: 258 SC 259
Score = 31.3 bits (70), Expect = 3.1
Identities = 16/106 (15%), Positives = 23/106 (21%), Gaps = 19/106 (17%)
Query: 406 SEMVQHRDWVHGDKCYLCKICGARVKSNLKAHMRIHTGERPVCCHICGKKLRGKLKDHML 465
E LC CG+ + + TG R + C +C
Sbjct: 172 EEGAVVETESRT----LCPACGSPPMAGMIRQGGKETGLRYLSCSLCA------------ 215
Query: 466 THTGERPFGCEVCGSTYKYKY---YLAVHMRKHTGERPYVCNYCGH 508
C C + Y + R C C
Sbjct: 216 CEWHYVRIKCSHCEESKHLAYLSLEHDGQPAEKAVLRAETCPSCQG 261
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 31.0 bits (69), Expect = 0.24
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 468 TGERPFGCEVCGSTYKYKYYLAVHMRKHTGER 499
+ +P+ C C K L VH+RKHTGE+
Sbjct: 5 SSGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 29.8 bits (66), Expect = 0.57
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 1087 TGERPYACEFCGSSFKDKSYLRIHIRKHNGER 1118
+ +PY C C + K+ L +H+RKH GE+
Sbjct: 5 SSGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 29.0 bits (64), Expect = 0.96
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 714 TGERPYACEICGGTFKTKWYLGVHMRKHNGER 745
+ +PY C C K L VH+RKH GE+
Sbjct: 5 SSGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 29.0 bits (64), Expect = 0.99
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 419 KCYLCKICGARVKSNLKAHMRIHTGER 445
KC C A +K+NL H+R HTGE+
Sbjct: 11 KCPQCSYASA-IKANLNVHLRKHTGEK 36
Score = 28.3 bits (62), Expect = 1.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 745 RPYMCSECGQSFAARSAFSLHLKKHAGFK 773
+PY C +C + A ++ ++HL+KH G K
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 27.1 bits (59), Expect = 4.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 496 TGERPYVCNYCGHSFAARPAFNLHLKRHT 524
+ +PY C C ++ A + N+HL++HT
Sbjct: 5 SSGKPYKCPQCSYASAIKANLNVHLRKHT 33
Score = 27.1 bits (59), Expect = 5.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 1118 RPFTCSECGQSFAARSAFSLHLKKHAG 1144
+P+ C +C + A ++ ++HL+KH G
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTG 34
Score = 26.7 bits (58), Expect = 8.4
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 1038 KCHICKVCGAKIKGNLQQHMETHSGEK 1064
KC C A IK NL H+ H+GEK
Sbjct: 11 KCPQCSYASA-IKANLNVHLRKHTGEK 36
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 29.8 bits (66), Expect = 0.54
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 465 LTHTGERPFGCEVCGSTYKYKYYLAVHMRKHTGER 499
+ + + F CE C +K+K+ L H+R HT E+
Sbjct: 2 SSGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 29.0 bits (64), Expect = 1.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 1084 LTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGER 1118
+ + + + CE+C FK K L+ H+R H E+
Sbjct: 2 SSGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 28.7 bits (63), Expect = 1.5
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 1267 RVFTCEVCGKGFIQKRYLEEHKRVHTGYK 1295
++FTCE C K F K L+ H R+HT K
Sbjct: 8 KIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 26.7 bits (58), Expect = 7.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 178 MGIKQKKKFECAHCSKTYLSRVGLEDHINNHTGEK 212
K F C +C+K + + L+ H+ HT EK
Sbjct: 2 SSGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
>3ucp_A UNDA; beta-barrel, C-type cytochrome, electron transport, C-type H
cell surface, transport protein; HET: HEC; 1.76A
{Shewanella SP} PDB: 3ufh_A* 3ufk_A*
Length = 874
Score = 34.3 bits (76), Expect = 0.55
Identities = 47/515 (9%), Positives = 103/515 (20%), Gaps = 32/515 (6%)
Query: 336 GAKFISRTHIADHMTSHTGIKNHVCSICQSTYTTARGLKRHNKNHLREAGVLRADEMYKC 395
+ H + + S + G ++ + V + C
Sbjct: 303 MGAMVHAIHKGTYAMVGYSGTAYDFSGTMAKAAAESGYPQYREGKDVSERVTLPVSIGNC 362
Query: 396 DKCDKLFIEQSEMVQHRDWVHGDKCYLCKICGARVKSNLKAHMRIHTGERPVCCHICGKK 455
C + G C C + G N + +
Sbjct: 363 QSCHSTDDKGPVDAASFKHHKGLACASCHMSGFNPVDNSEWLTPPEGQKDRGFVGNYFHY 422
Query: 456 LRGKLKDHMLTHTGERPF---GCEVCGSTYKYKYYLAVHMRKHTGERPYVCNYCGHSFAA 512
D + F GC C + + H+ K + Y
Sbjct: 423 YATPEIDGIPGVNLVHVFQNGGCASCHAEQGEEGSAKYHLAKANATKLLRTEYAYKLENG 482
Query: 513 RPAFN---LHLKRHTERGDVRHIECQHSLKIIEYKIYQWISIENWFKIKRENVPSTKD-- 567
L + H + + + + + + +++
Sbjct: 483 TFDVAKGELTFTVNWHSDVAPHQDPKVKEFWVSLTAFNGTEYTMGPRPSNGTLGRSENRI 542
Query: 568 ----QSHKKRDQKIECNICGALFATKYTLQDHMNTHTGNKYKCDVCDNGYSSLKHLKRHK 623
+ + T ++ + T + + G+ K L
Sbjct: 543 SVNLAKVETNANLTAVPNGSKVTYTLTGIKAVIGTSSVPYKQIVSIGKGFMDGKLLICAN 602
Query: 624 MKHLQENGELPPSKIQKCPICHKIFIRNYMLRKHLDFVHGNKYH------SCKVC-GAEI 676
L + +++ + + D + C C G +
Sbjct: 603 SAELDPTMDAAIDCSNTEAPIYEVIVGSNKASFSADASNVTARSIVISEAKCANCHGEKA 662
Query: 677 KGSLKEHMIVHTGERKYCCHICGKKMRGKLKEHMLTHTGERPYACEICGGTFKTKWYLGV 736
S + + C C H A C
Sbjct: 663 DFSASHALTHAADKPDNSCGTC----------HSAVPNTAVALADGSCVACHNGAPAHSK 712
Query: 737 HMRKHNGERPYMCSECGQSFAARSAFSLHLKKHAGFKQTIECEYCHNTFTFETGLMGVVT 796
+ + M + + + C CH+ +G
Sbjct: 713 KPFERGFDFKVMIHQIHADTRSVRRLTTDAATFPE--NPANCAACHDKGQLSLATLGNKP 770
Query: 797 -RDEWEILLRDKVRICPKCNKEFYSDRTMRRHLKQ 830
V C C+ +D + H +
Sbjct: 771 AFLASTGEYSPTVAACASCHATTATDSAVIGHFET 805
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 30
Score = 29.4 bits (66), Expect = 0.64
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQG 863
K ++C C++ F R+ L RH IH G
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSG 28
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 29.8 bits (66), Expect = 0.70
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 466 THTGERPFGCEVCGSTYKYKYYLAVHMRKHT 496
+ E+ F C C T+ YL H R HT
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 29.8 bits (66), Expect = 0.80
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 1263 HANNRVFTCEVCGKGFIQKRYLEEHKRVHT 1292
+ F C C K F +YL +H+R+HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 27.5 bits (60), Expect = 4.2
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 712 THTGERPYACEICGGTFKTKWYLGVHMRKH 741
+ E+ + C C TF YL H R H
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIH 35
>3ung_C CMR2DHD; ferredoxin fold, nucleotide-binding, polymerase, CMR complex
function; HET: ADP; 2.31A {Pyrococcus furiosus} PDB:
3ur3_C 4doz_A
Length = 693
Score = 33.5 bits (75), Expect = 0.82
Identities = 17/186 (9%), Positives = 57/186 (30%), Gaps = 9/186 (4%)
Query: 850 REKLQRHWNYIHQGIRNT-GPNQLLECHYCGITKNNKTLLRDHISAHLGIKPYCCIFCEE 908
+++++ +++ + N +++ K + + + E+
Sbjct: 141 KKRIRDFLLQLYREAVDWAVENGVVKVDRSEKDSMLKEAYLKIVREYFTVSITWVSLSEK 200
Query: 909 KYFSKKSLKRHEAKHNKVYNKAQYQDYQIQDLSMDQYRELVQSKERKCPKCEKEFSTPRY 968
+ + + + + ++ + + +++ + E++ + R+
Sbjct: 201 EDIYQVTENAGLSDEDVK-KWLKFAEKKENSRVLERIAIYPLLVKILDSLGERKVTEERF 259
Query: 969 MRKHLRKKFKCDVCGNGYTSVKHLKRHK-IKHMKESGELPPSMIHKCPTCYKIFTENHAL 1027
+ K +KC VCG + H +K + E CP C +
Sbjct: 260 EKSEQLKGWKCHVCGENLAIFGDMYDHDNLKSLWLDEE------PLCPMCLIKRYYPVWI 313
Query: 1028 KKHLDW 1033
+
Sbjct: 314 RSKTGQ 319
Score = 31.6 bits (70), Expect = 3.0
Identities = 29/172 (16%), Positives = 51/172 (29%), Gaps = 14/172 (8%)
Query: 98 DWLHAIHFRSEKNLTSEEWRQLVIKNARKCPICGDRYKSGTDMRRHYR-DLHDSTRKCPC 156
+ + E+ +T E + + KC +CG+ DM H + C
Sbjct: 241 LLVKILDSLGERKVTEERFEKSEQLKGWKCHVCGENLAIFGDMYDHDNLKSLWLDEEPLC 300
Query: 157 EVCGKRFNSIKRVKQHRKVVHMGIKQKKKFECAHCSKTYLSRVGLEDHINNH-------- 208
+C IKR G K + + R ++
Sbjct: 301 PMC-----LIKRYYPVWIRSKTGQKIRFESVVDVALLYKNWRKIFDEKYGKDLVSKAREV 355
Query: 209 TGEKGHICEICNRDFYSDAMLKRHLVKHSRMIKETSEEFVETGSITREEWYK 260
+ + + + D Y + + L K + KE EE V+ YK
Sbjct: 356 SEDFVKDNMLVDSDLYYSSTWESGLSKKLKNKKEIDEEKVKEVVDFLNAAYK 407
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA
motif, metal binding protein; NMR {Synthetic} SCOP:
g.37.1.3 PDB: 2l1o_A
Length = 39
Score = 29.3 bits (66), Expect = 0.90
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 717 RPYACEICGGTFKTKWYLGVHMRKHNGER 745
R Y C C F++ LG HM H +R
Sbjct: 5 RSYTCSFCKREFRSAQALGGHMNVHRRDR 33
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 28
Score = 28.6 bits (63), Expect = 1.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 1267 RVFTCEVCGKGFIQKRYLEEHKRVHTG 1293
R ++C VCGK F K +E H RVHTG
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 27.5 bits (60), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 471 RPFGCEVCGSTYKYKYYLAVHMRKHTG 497
RP+ C VCG + K+ + H R HTG
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 26.3 bits (57), Expect = 7.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 717 RPYACEICGGTFKTKWYLGVHMRKHNG 743
RPY+C +CG F K + H R H G
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 26.3 bits (57), Expect = 8.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 745 RPYMCSECGQSFAARSAFSLHLKKHAG 771
RPY CS CG+ F+ + H + H G
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav
myristol group, icosahedral virus; HET: MYR; 3.30A {Grass
carp reovirus} PDB: 3k1q_C 3k1q_B
Length = 1214
Score = 32.9 bits (74), Expect = 1.2
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 1706 RDTKFPCRLCSQEFDTKEQRKKHERKDHET 1735
+ + C +C+ F T +H R DH
Sbjct: 113 NPSSYVCNVCNARFSTMSALSEHLRSDHRD 142
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 29.1 bits (64), Expect = 1.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 1264 ANNRVFTCEVCGKGFIQKRYLEEHKRVHTG 1293
A C+ CGK F L EH+ +H G
Sbjct: 8 AAKTTSECQECGKIFRHSSLLIEHQALHAG 37
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 29
Score = 28.2 bits (62), Expect = 1.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 1090 RPYACEFCGSSFKDKSYLRIHIRKHNGER 1118
+P C CG +F S L H+R+H GE+
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 26.7 bits (58), Expect = 6.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 1271 CEVCGKGFIQKRYLEEHKRVHTGYK 1295
C +CGK F Q L H R HTG K
Sbjct: 5 CVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 26.7 bits (58), Expect = 6.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 471 RPFGCEVCGSTYKYKYYLAVHMRKHTGER 499
+P C +CG + L H+R+HTGE+
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 28.6 bits (63), Expect = 1.9
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 291 SKVRPHQCKGCGKYFKSQRHLVQHERRVHLGVKKIKHSN 329
S+ + HQC+ CG+ F L++H+ +H+G K S+
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQ-VLHMGQKNSGPSS 45
Score = 27.1 bits (59), Expect = 7.6
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 836 KTFSCEECDKIFATREKLQRHWNYIHQGIRNTGPN 870
K+ C EC +IF L H +H G +N+GP+
Sbjct: 11 KSHQCRECGEIFFQYVSLIEH-QVLHMGQKNSGPS 44
Score = 26.7 bits (58), Expect = 9.8
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 744 ERPYMCSECGQSFAARSAFSLHLKKHAGFKQT 775
E+ + C ECG+ F + H H G K +
Sbjct: 10 EKSHQCRECGEIFFQYVSLIEHQVLHMGQKNS 41
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 31.1 bits (69), Expect = 2.1
Identities = 7/21 (33%), Positives = 11/21 (52%), Gaps = 3/21 (14%)
Query: 1280 QKRYLEEHKRVHTGYKPYACD 1300
+K+ L K++ K YA D
Sbjct: 18 EKQAL---KKLQASLKLYADD 35
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix,
anti-parrallel beta sheet, double straded anti-parallel
beta helix, metal binding protein; 2.00A {Mus musculus}
Length = 404
Score = 31.9 bits (72), Expect = 2.3
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 8/60 (13%)
Query: 949 VQSKERKCPKCEKEFST-------PRYMRKHLRKKFKCDVCGNGYTSVKHLKRHKIKHMK 1001
S E C C + +T P + R+ + F C+ CG T ++ R + + ++
Sbjct: 8 HGSIESLCMNCYRNGTTRLLLTKIP-FFREIIVSSFSCEHCGWNNTEIQSAGRIQDQGVR 66
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 37
Score = 28.3 bits (62), Expect = 2.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 811 CPKCNKEFYSDRTMRRHLKQVHIEI 835
CP C K F DR ++ H+K H E+
Sbjct: 12 CPVCEKSFSEDRLIKSHIKTNHPEV 36
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC,
histone methylation, Zn transcriptional regulation,
chromatin, transcription; 1.73A {Homo sapiens}
Length = 237
Score = 31.3 bits (70), Expect = 2.3
Identities = 8/51 (15%), Positives = 13/51 (25%), Gaps = 7/51 (13%)
Query: 1077 GRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQ 1127
+ H GE+ E + LR I + G+
Sbjct: 194 SQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIH-------LSVLRQGK 237
Score = 30.9 bits (69), Expect = 3.8
Identities = 15/127 (11%), Positives = 36/127 (28%), Gaps = 3/127 (2%)
Query: 1019 KIFTENHALKKHLDWVHGNKCHICKVCGA-KIKGNLQQHMET--HSGEKKICCHICGKKL 1075
+I T++ + + + G+ + K N +++ E+ + +++
Sbjct: 105 QISTQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERI 164
Query: 1076 RGRLNEHMLTHTGERPYACEFCGSSFKDKSYLRIHIRKHNGERPFTCSECGQSFAARSAF 1135
R + R + E S IH GE+ + Q
Sbjct: 165 YFRACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDL 224
Query: 1136 SLHLKKH 1142
+
Sbjct: 225 RGPIHLS 231
Score = 30.6 bits (68), Expect = 4.9
Identities = 9/53 (16%), Positives = 14/53 (26%)
Query: 1267 RVFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLH 1319
RV+ E K H+ + G K + + L L
Sbjct: 179 RVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 30.2 bits (67), Expect = 5.8
Identities = 5/49 (10%), Positives = 12/49 (24%)
Query: 1186 CEHCSKPFTSKGNLTVHVKYYHAKTLFECNICLKTFNFKTSYKRHLKQH 1234
E K S T+H + + + + + +
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 29.4 bits (65), Expect = 9.9
Identities = 11/99 (11%), Positives = 29/99 (29%), Gaps = 3/99 (3%)
Query: 1195 SKGNLTVHVKYYHAKTLFECNICLKTFNFKTSYK-RHLKQHDDSVTYYPCTVCSKNLSSP 1253
+K N +V ++ E N+ + + ++ + + + + K L S
Sbjct: 136 TKANWMRYVV--ISREEREQNLLAFQHSERIYFRACRDIRPGEWLRVWYSEDYMKRLHSM 193
Query: 1254 YRLKTHMLIHANNRVFTCEVCGKGFIQKRYLEEHKRVHT 1292
+ H + + E + L +
Sbjct: 194 SQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSV 232
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif,
transcription regulation, zinc-finger; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1
Length = 47
Score = 27.9 bits (62), Expect = 3.9
Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 1824 CQCDVCGKSFARTFHLKSHISSVHLK 1849
C C K+F R ++++SHI + HL+
Sbjct: 21 CLFPGCTKTFKRRYNIRSHIQT-HLE 45
Score = 27.5 bits (61), Expect = 4.6
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 1089 ERPYACEF--CGSSFKDKSYLRIHIRKHNGER 1118
++ + C F C +FK + +R HI+ H +R
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2
zinc fingers, beta-BETA-alpha, solution structure; NMR
{Saccharomyces cerevisiae}
Length = 64
Score = 28.1 bits (62), Expect = 3.9
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 841 EECDKIFATREKLQRHWNYIHQGIRNTGPNQLLECHY--CGITKNNKTLLRDHI 892
+EC + ++ LQRH H P + L C++ C ++ + +HI
Sbjct: 7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHI 60
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 27.1 bits (59), Expect = 5.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 211 EKGHICEICNRDFYSDAMLKRHLVKHS 237
K H+C++C + F S LK H + H+
Sbjct: 7 GKTHLCDMCGKKFKSKGTLKSHKLLHT 33
Score = 27.1 bits (59), Expect = 5.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 1295 KPYACDLCSKQFTQKSTLNIHRKLH 1319
K + CD+C K+F K TL H+ LH
Sbjct: 8 KTHLCDMCGKKFKSKGTLKSHKLLH 32
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain
associated with ring and TRAF domains protein 1,
malignant 62; NMR {Homo sapiens}
Length = 76
Score = 28.4 bits (63), Expect = 5.4
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 1052 NLQQHMETHSGEKKICCHICGKKL-RGRLNEHMLTHTGERPYACEFCGSSFK 1102
H+ T S C + C KL R L H+ +R CEFCG F
Sbjct: 4 GSSGHLNTCSFNVIPCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEFCGCDFS 55
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein
structure, MCCC7, peptide antibiotics, N-P bond
formation, transferase; HET: ATP; 1.90A {Escherichia
coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Length = 353
Score = 30.4 bits (69), Expect = 5.8
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 115 EWRQLVIKNARKCPICGDR 133
+ + + C +CG+R
Sbjct: 334 KIHSQNMGRSPVCSVCGNR 352
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA
binding motif, transcriptional regulator, bacter
antitoxin, Zn binding protein, transcription
regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB:
3gn5_A* 3gn5_B* 2kz8_A
Length = 133
Score = 29.4 bits (65), Expect = 6.3
Identities = 13/81 (16%), Positives = 23/81 (28%), Gaps = 3/81 (3%)
Query: 776 IECEYC-HNTFTFETGLMGVVTRDEWEILLRDKVRICPKCNKEFYSDRTMRRHLKQVHIE 834
++C C + R +L C C + + + QV
Sbjct: 3 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAF 62
Query: 835 IKTFSCEECD--KIFATREKL 853
+ + E I R+KL
Sbjct: 63 RASVNAETVAPEFIVKVRKKL 83
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex,
restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE;
1.50A {Helicobacter pylori} PDB: 3fc3_A*
Length = 200
Score = 29.9 bits (66), Expect = 6.4
Identities = 19/111 (17%), Positives = 29/111 (26%), Gaps = 8/111 (7%)
Query: 941 SMDQYRELVQSKERKCPKCEKEFSTPRYMRKHLRK------KFKCDVCGNGYTSVKHLKR 994
++D YR ++ C C +T + + C C VK
Sbjct: 63 AIDIYRTGKGYDKKICNICHILKNTDGFEINQTDAKGRKTTRPSCRECRKNIDGVK--LS 120
Query: 995 HKIKHMKESGELPPSMIHKCPTCYKIFTENHALKKHLDWVHGNKCHICKVC 1045
K + P + CP C K D H +C
Sbjct: 121 STEKKKMDEIAPPKGSVFTCPICEKRSIVGVTANLVHDHNHDTGWGREWIC 171
Score = 29.9 bits (66), Expect = 6.5
Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 8/114 (7%)
Query: 114 EEWRQLVIKNARKCPICGDRYKSGTD--MRRHYRDLHDSTRKCPCEVCGKRFNSIKRVKQ 171
+ +R + + C IC K+ + + +TR C C K + +K
Sbjct: 65 DIYRTGKGYDKKICNICH-ILKNTDGFEINQTDAKGRKTTRP-SCRECRKNIDGVKLSST 122
Query: 172 HRKVV-HMGIKQKKKFECAHCSKTYLSRVGLE---DHINNHTGEKGHICEICNR 221
+K + + + F C C K + V DH ++ + IC+ CN
Sbjct: 123 EKKKMDEIAPPKGSVFTCPICEKRSIVGVTANLVHDHNHDTGWGREWICDSCNT 176
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR
{Xenopus laevis} SCOP: g.37.1.1
Length = 27
Score = 26.3 bits (57), Expect = 7.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 1297 YACDLCSKQFTQKSTLNIHRKLHLN 1321
Y C LC + F +KS L+ H+++H N
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHKN 26
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC),
C2H2, APO metal-binding, nucleus, phosphoprotein,
transcription, TRAN regulation; 1.80A {Homo sapiens}
Length = 48
Score = 27.1 bits (59), Expect = 7.9
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 1089 ERPYACEFCGSSFKDKSYLRIHIRKHNGERP 1119
++PYAC+ CG +K++ L H +
Sbjct: 5 DKPYACDICGKRYKNRPGLSYHYAHSHLAEE 35
Score = 26.7 bits (58), Expect = 8.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 1295 KPYACDLCSKQFTQKSTLNIHR 1316
KPYACD+C K++ + L+ H
Sbjct: 6 KPYACDICGKRYKNRPGLSYHY 27
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 26
Score = 26.2 bits (57), Expect = 7.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 1090 RPYACEFCGSSFKDKSYLRIHIRKHN 1115
+PY CE CG F S L HIR H+
Sbjct: 1 KPYVCERCGKRFVQSSQLANHIRHHD 26
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR
{Homo sapiens} SCOP: g.41.3.1
Length = 62
Score = 27.1 bits (60), Expect = 8.1
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Query: 1284 LEEHKRVHTGYKPYACDLCSKQFTQKSTLNIHRKLHLNIKDFICDLCGA 1332
+E +R T + C +CS FT L ++ F C C
Sbjct: 2 IETDERDSTNRASFKCPVCSSTFT---DLEANQLFDPMTGTFRCTFCHT 47
>3ax1_A Serrate RNA effector molecule; miRNA processing, protein binding;
2.74A {Arabidopsis thaliana}
Length = 358
Score = 30.0 bits (66), Expect = 8.2
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 955 KCPKCEKEFSTPRYMRKHLRKK 976
C K F ++ KHL+ K
Sbjct: 308 GAKGCTKLFHAAEFVYKHLKLK 329
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 27.6 bits (61), Expect = 8.3
Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 1026 ALKKHLDWVHGNKCHICKVCGAKIKGNLQQHMETHSGEKKICCHICGKKLRGR-LNEHML 1084
H + + +C+ C ++ + E + G + C CG+ + + L H
Sbjct: 4 GSSGHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTHPE 63
Query: 1085 THTGE 1089
E
Sbjct: 64 VCGRE 68
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 26.4 bits (57), Expect = 8.6
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 1090 RPYACEFCGSSFKDKSYLRIHIRKHNGER 1118
+P+ C C + + KS L+ H+ +H+ E+
Sbjct: 8 KPFKCSLCEYATRSKSNLKAHMNRHSTEK 36
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE]
hydrogenase maturation, zinc-finger, nickel binding,
metal-binding; HET: FME; 2.30A {Pyrococcus
kodakaraensis} PDB: 3a44_A*
Length = 139
Score = 28.8 bits (64), Expect = 9.0
Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 279 AKGMRLHIREVHSKVRPHQCKGCGKYFKSQRHLVQHERRV---HLGVKKIKHSNFECFHC 335
A+G + E + + C+ C +K + + + R+ + ++ H+ C C
Sbjct: 57 AEGAEIEFVEEEAVFK---CRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKC 113
Query: 336 GA 337
G+
Sbjct: 114 GS 115
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein,
C2H2 type zinc-finger, structural genomics; NMR {Mus
musculus} SCOP: g.37.1.2 g.37.1.2
Length = 79
Score = 27.5 bits (61), Expect = 9.1
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 1268 VFTCEVCGKGFIQKRYLEEHKRVHTGYKPYACDLCSKQFTQKS 1310
FTC CG+ ++K +E+H + +C C K F
Sbjct: 10 FFTCNACGES-VKKIQVEKHVSNCRNCECLSCIDCGKDFWGDD 51
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast
structural genomics consortiu PSI-biology, protein
structure initiative, transferase; NMR {Homo sapiens}
Length = 164
Score = 28.9 bits (64), Expect = 10.0
Identities = 16/118 (13%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Query: 51 SYVAAKGLKRHLKRHMQATGQLSVEDMYQCDICSKMFIEHHAMVKHRDWLHAIHFRSEKN 110
+Y + K++ K + + VE + D ++ V H + ++ +
Sbjct: 49 TYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDA--NTLYIFAPSP 106
Query: 111 LTSEEWRQLVIKNARKCPICGDRYKSGTDMRRHYRDLHDSTRKCP-CEVCGKRFNSIK 167
+ + W + + + + +Y Y+ + + P CE +SI+
Sbjct: 107 QSRDLWVKKLKEEIKNNNNIMIKYHPKFWTDGSYQCCRQTEKLAPGCEKYNLFESSIR 164
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.136 0.446
Gapped
Lambda K H
0.267 0.0544 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 29,410,806
Number of extensions: 1778375
Number of successful extensions: 18781
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15293
Number of HSP's successfully gapped: 4704
Length of query: 1930
Length of database: 6,701,793
Length adjustment: 108
Effective length of query: 1822
Effective length of database: 3,686,325
Effective search space: 6716484150
Effective search space used: 6716484150
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.2 bits)